BEN31_03450 811d806e0be3230c906ac8774d479e1f 151 Pfam PF15599 Immunity protein 63 54 145 5.8E-28 T 12-10-2018 IPR028952 Immunity protein 63 BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 SUPERFAMILY SSF46689 10 85 3.95E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 SUPERFAMILY SSF48498 85 198 5.78E-40 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 1.3E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 Gene3D G3DSA:1.10.357.10 62 201 4.0E-34 T 12-10-2018 BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 Gene3D G3DSA:1.10.10.60 13 61 2.8E-20 T 12-10-2018 BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 ProSitePatterns PS01081 TetR-type HTH domain signature. 30 60 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 Pfam PF08360 QacR-like protein, C-terminal region 73 198 2.3E-19 T 12-10-2018 IPR013571 Transcription regulator QacR, C-terminal GO:0003700|GO:0045892 BEN31_13105 d8289eb600150b01dce0a0438ff09833 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 2.5E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14255 c9b0e824c1354b3541039682c95caffc 321 Pfam PF14501 GHKL domain 209 311 3.0E-12 T 12-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain BEN31_14255 c9b0e824c1354b3541039682c95caffc 321 Gene3D G3DSA:3.30.565.10 168 318 1.9E-17 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_14255 c9b0e824c1354b3541039682c95caffc 321 SUPERFAMILY SSF55874 174 317 1.83E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_14255 c9b0e824c1354b3541039682c95caffc 321 SMART SM00387 210 320 1.5E-5 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 699 1.7E-157 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 Pfam PF00122 E1-E2 ATPase 199 380 3.2E-46 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 Gene3D G3DSA:3.30.70.100 7 87 6.9E-14 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 Pfam PF00702 haloacid dehalogenase-like hydrolase 398 608 6.1E-36 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 169 674 5.2E-72 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 Gene3D G3DSA:2.70.150.20 186 302 6.1E-30 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 Pfam PF00403 Heavy-metal-associated domain 11 66 4.9E-13 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00941 Cadmium-transporting ATPase signature 264 280 1.8E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00941 Cadmium-transporting ATPase signature 19 40 1.8E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00941 Cadmium-transporting ATPase signature 283 297 1.8E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00941 Cadmium-transporting ATPase signature 183 203 1.8E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00941 Cadmium-transporting ATPase signature 8 17 1.8E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00941 Cadmium-transporting ATPase signature 111 128 1.8E-14 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 Gene3D G3DSA:3.40.50.1000 381 647 7.8E-83 T 12-10-2018 IPR023214 HAD superfamily BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 402 408 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 Gene3D G3DSA:3.40.1110.10 411 523 7.8E-83 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 SUPERFAMILY SSF56784 400 695 3.99E-63 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 SUPERFAMILY SSF81665 149 692 7.98E-12 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 149 697 3.2E-173 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 SUPERFAMILY SSF55008 4 72 1.83E-13 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 SUPERFAMILY SSF81653 201 298 1.03E-21 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 400 414 1.9E-25 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 618 630 1.9E-25 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 548 1.9E-25 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 248 262 1.9E-25 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 613 1.9E-25 T 12-10-2018 BEN31_01055 de336d8d17bcf5c78097cd1a69ed8e69 699 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BEN31_14975 76db736b3b103ad262ccf5b59c773fc7 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.851 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14975 76db736b3b103ad262ccf5b59c773fc7 132 Gene3D G3DSA:3.30.1370.30 4 74 8.6E-33 T 12-10-2018 BEN31_14975 76db736b3b103ad262ccf5b59c773fc7 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14975 76db736b3b103ad262ccf5b59c773fc7 132 Pfam PF00410 Ribosomal protein S8 5 132 4.4E-54 T 12-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14975 76db736b3b103ad262ccf5b59c773fc7 132 SUPERFAMILY SSF56047 2 132 5.23E-49 T 12-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14975 76db736b3b103ad262ccf5b59c773fc7 132 Gene3D G3DSA:3.30.1490.10 75 132 9.1E-27 T 12-10-2018 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 10 471 4.9E-228 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 Gene3D G3DSA:1.20.200.10 144 411 1.2E-112 T 12-10-2018 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 Gene3D G3DSA:1.10.275.10 10 143 2.6E-57 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 Gene3D G3DSA:1.10.40.30 412 463 2.3E-21 T 12-10-2018 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 PRINTS PR00145 Argininosuccinate lyase family signature 321 337 1.8E-5 T 12-10-2018 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 PRINTS PR00145 Argininosuccinate lyase family signature 179 199 1.8E-5 T 12-10-2018 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 PRINTS PR00149 Fumarate lyase superfamily signature 184 202 6.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 PRINTS PR00149 Fumarate lyase superfamily signature 139 157 6.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 PRINTS PR00149 Fumarate lyase superfamily signature 321 337 6.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 PRINTS PR00149 Fumarate lyase superfamily signature 275 302 6.9E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 SUPERFAMILY SSF48557 10 466 3.93E-146 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 Pfam PF10415 Fumarase C C-terminus 413 465 6.2E-19 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 ProSitePatterns PS00163 Fumarate lyases signature. 321 330 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN31_01015 a3b6c9fbe78f1f77cdf6805d582a56e4 481 Pfam PF00206 Lyase 17 346 2.6E-112 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BEN31_00065 ea8a56ea9b61d85afb92c4e7308f7523 355 Gene3D G3DSA:3.90.320.10 142 299 2.5E-5 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BEN31_17705 9bca07ebe39b414fed53c611191e0bcc 398 SMART SM00833 260 375 1.1E-45 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BEN31_17705 9bca07ebe39b414fed53c611191e0bcc 398 Gene3D G3DSA:3.40.50.300 2 230 7.4E-73 T 12-10-2018 BEN31_17705 9bca07ebe39b414fed53c611191e0bcc 398 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 375 6.0E-26 T 12-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal BEN31_17705 9bca07ebe39b414fed53c611191e0bcc 398 SUPERFAMILY SSF52540 3 308 1.68E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17705 9bca07ebe39b414fed53c611191e0bcc 398 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 211 3.8E-59 T 12-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 Gene3D G3DSA:3.10.290.10 328 422 4.9E-34 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 421 46.068 T 12-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 421 1.1E-143 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 Gene3D G3DSA:3.40.50.620 1 224 2.2E-87 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 Pfam PF00579 tRNA synthetases class I (W and Y) 29 326 1.5E-87 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 SMART SM00363 356 417 5.3E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 SUPERFAMILY SSF55174 323 421 9.55E-25 T 12-10-2018 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 SUPERFAMILY SSF52374 2 325 5.63E-106 T 12-10-2018 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 Gene3D G3DSA:1.10.240.10 225 327 1.9E-41 T 12-10-2018 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 Pfam PF01479 S4 domain 357 402 5.3E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 5.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 5.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 5.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN31_02945 ce0095d64ecf84f488f90b97891e6595 422 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 5.2E-31 T 12-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 PIRSF PIRSF005901 1 185 2.9E-70 T 12-10-2018 IPR020599 Translation elongation factor P/YeiP BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 SMART SM00841 129 184 7.2E-33 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 Gene3D G3DSA:2.40.50.140 128 185 9.4E-26 T 12-10-2018 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 7.6E-26 T 12-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 7.3E-29 T 12-10-2018 IPR013185 Translation elongation factor, KOW-like BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 SUPERFAMILY SSF50249 65 129 2.91E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 49.688 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 SUPERFAMILY SSF50249 128 185 8.91E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 Gene3D G3DSA:2.40.50.140 64 127 4.1E-24 T 12-10-2018 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 3.8E-79 T 12-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 Gene3D G3DSA:2.30.30.30 1 62 9.1E-32 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 SUPERFAMILY SSF50104 1 62 4.63E-22 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 SMART SM01185 67 121 1.2E-22 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 118 1.2E-19 T 12-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 BEN31_05070 8991e4eb325d0e8ceb8de2bb91b1f152 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 12-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site BEN31_13160 fc230e5e899fe23a71533a23ec2bc76d 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 6.4E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_13160 fc230e5e899fe23a71533a23ec2bc76d 192 Gene3D G3DSA:1.10.357.10 3 171 4.6E-23 T 12-10-2018 BEN31_13160 fc230e5e899fe23a71533a23ec2bc76d 192 SUPERFAMILY SSF46689 7 68 2.05E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_13160 fc230e5e899fe23a71533a23ec2bc76d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 2.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_13160 fc230e5e899fe23a71533a23ec2bc76d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 2.4E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07925 877f79fe0ab5f3b6e8d84c11e52eb817 409 Gene3D G3DSA:3.30.830.10 1 214 1.9E-82 T 12-10-2018 BEN31_07925 877f79fe0ab5f3b6e8d84c11e52eb817 409 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 1.8E-48 T 12-10-2018 IPR011765 Peptidase M16, N-terminal BEN31_07925 877f79fe0ab5f3b6e8d84c11e52eb817 409 SUPERFAMILY SSF63411 221 401 1.02E-44 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN31_07925 877f79fe0ab5f3b6e8d84c11e52eb817 409 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 12-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 BEN31_07925 877f79fe0ab5f3b6e8d84c11e52eb817 409 SUPERFAMILY SSF63411 3 204 5.59E-63 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN31_07925 877f79fe0ab5f3b6e8d84c11e52eb817 409 Pfam PF05193 Peptidase M16 inactive domain 166 338 4.3E-37 T 12-10-2018 IPR007863 Peptidase M16, C-terminal BEN31_07925 877f79fe0ab5f3b6e8d84c11e52eb817 409 Gene3D G3DSA:3.30.830.10 218 409 3.7E-53 T 12-10-2018 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 Gene3D G3DSA:2.40.240.60 356 428 9.3E-20 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 Pfam PF09269 Domain of unknown function (DUF1967) 358 426 8.2E-26 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 320 7.5E-12 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 4.3E-146 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 PIRSF PIRSF002401 1 376 2.2E-145 T 12-10-2018 IPR035101 GTP-binding protein, Obg-type BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 Pfam PF01018 GTP1/OBG 3 157 4.3E-61 T 12-10-2018 IPR006169 GTP1/OBG domain BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 SUPERFAMILY SSF52540 160 332 1.47E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 Gene3D G3DSA:2.70.210.12 1 157 3.0E-62 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 Gene3D G3DSA:3.40.50.300 158 341 2.3E-62 T 12-10-2018 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 SUPERFAMILY SSF82051 1 157 3.53E-56 T 12-10-2018 IPR036726 GTP1/OBG domain superfamily BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 2.9E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.9E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 2.9E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.9E-35 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 SUPERFAMILY SSF102741 356 428 1.7E-24 T 12-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.0E-23 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 12-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 426 6.0E-27 T 12-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 BEN31_03835 00cb1fc90a50856fabc2d33fadf695b1 428 Hamap MF_01454 GTPase Obg [obg]. 1 329 48.88 T 12-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 BEN31_00855 42be1693b9131b0bbaf565da5caf4172 395 Gene3D G3DSA:3.30.2320.10 249 386 5.2E-14 T 12-10-2018 BEN31_00855 42be1693b9131b0bbaf565da5caf4172 395 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 7 390 2.9E-73 T 12-10-2018 IPR024455 Phage capsid BEN31_00855 42be1693b9131b0bbaf565da5caf4172 395 SUPERFAMILY SSF56563 119 391 2.22E-44 T 12-10-2018 BEN31_00855 42be1693b9131b0bbaf565da5caf4172 395 Pfam PF05065 Phage capsid family 127 390 2.6E-31 T 12-10-2018 IPR024455 Phage capsid BEN31_00855 42be1693b9131b0bbaf565da5caf4172 395 Gene3D G3DSA:3.30.2400.10 182 381 5.2E-14 T 12-10-2018 BEN31_10525 5f3ff2351e8adc5dd8dd026927ba32e5 613 SUPERFAMILY SSF51730 312 600 1.29E-68 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like BEN31_10525 5f3ff2351e8adc5dd8dd026927ba32e5 613 SUPERFAMILY SSF82282 2 359 3.27E-100 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN31_10525 5f3ff2351e8adc5dd8dd026927ba32e5 613 Pfam PF02574 Homocysteine S-methyltransferase 12 280 4.8E-60 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BEN31_10525 5f3ff2351e8adc5dd8dd026927ba32e5 613 Gene3D G3DSA:3.20.20.330 2 293 6.0E-89 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN31_10525 5f3ff2351e8adc5dd8dd026927ba32e5 613 Pfam PF02219 Methylenetetrahydrofolate reductase 313 572 4.1E-29 T 12-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BEN31_10525 5f3ff2351e8adc5dd8dd026927ba32e5 613 Gene3D G3DSA:3.20.20.220 311 597 4.6E-50 T 12-10-2018 BEN31_07385 654d6a4c9c7ee36fbd494843f63231ea 48 Pfam PF08175 Small acid-soluble spore protein O family 2 48 1.0E-25 T 12-10-2018 BEN31_07385 654d6a4c9c7ee36fbd494843f63231ea 48 Hamap MF_00665 Small, acid-soluble spore protein O [sspO]. 1 48 19.803 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 BEN31_07385 654d6a4c9c7ee36fbd494843f63231ea 48 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 1 48 5.7E-25 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 BEN31_07385 654d6a4c9c7ee36fbd494843f63231ea 48 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 3 35 1.0E-10 T 12-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 BEN31_01095 3ff9f0badaedf55339a0c8955ffef232 221 SUPERFAMILY SSF161098 6 218 2.09E-49 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_01095 3ff9f0badaedf55339a0c8955ffef232 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 217 5.2E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_01095 3ff9f0badaedf55339a0c8955ffef232 221 Gene3D G3DSA:1.10.3720.10 1 221 6.5E-55 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_01095 3ff9f0badaedf55339a0c8955ffef232 221 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 217 2.9E-70 T 12-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 Gene3D G3DSA:1.10.10.10 2 68 2.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 Hamap MF_00015 LexA repressor [lexA]. 3 205 34.418 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 131 142 3.8E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 120 130 3.8E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 160 172 3.8E-9 T 12-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 SUPERFAMILY SSF46785 3 70 1.88E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 Pfam PF00717 Peptidase S24-like 123 189 4.0E-17 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 1.3E-84 T 12-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 Gene3D G3DSA:2.10.109.10 88 205 2.1E-42 T 12-10-2018 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 Pfam PF01726 LexA DNA binding domain 1 65 1.0E-28 T 12-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BEN31_07450 47c945b23d9f512b599f12d9d62bc864 206 SUPERFAMILY SSF51306 82 203 4.88E-36 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN31_06620 3b14b67201217955babc09149530a334 624 SUPERFAMILY SSF48239 302 615 1.02E-80 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BEN31_06620 3b14b67201217955babc09149530a334 624 Gene3D G3DSA:1.50.10.20 19 614 1.2E-176 T 12-10-2018 BEN31_06620 3b14b67201217955babc09149530a334 624 SUPERFAMILY SSF48239 35 292 1.32E-41 T 12-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid BEN31_06620 3b14b67201217955babc09149530a334 624 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 16 291 4.4E-57 T 12-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 BEN31_06620 3b14b67201217955babc09149530a334 624 Gene3D G3DSA:1.50.10.20 33 302 1.2E-176 T 12-10-2018 BEN31_06620 3b14b67201217955babc09149530a334 624 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 19 615 7.7E-105 T 12-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 BEN31_06620 3b14b67201217955babc09149530a334 624 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 304 615 3.4E-79 T 12-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 BEN31_06095 a93edbace3c3db036114a758825f8468 431 Gene3D G3DSA:3.30.930.10 103 431 1.1E-119 T 12-10-2018 BEN31_06095 a93edbace3c3db036114a758825f8468 431 Pfam PF00152 tRNA synthetases class II (D, K and N) 112 425 2.5E-85 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_06095 a93edbace3c3db036114a758825f8468 431 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 430 2.1E-172 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BEN31_06095 a93edbace3c3db036114a758825f8468 431 Pfam PF01336 OB-fold nucleic acid binding domain 17 96 5.4E-17 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN31_06095 a93edbace3c3db036114a758825f8468 431 Gene3D G3DSA:2.40.50.140 2 102 4.4E-24 T 12-10-2018 BEN31_06095 a93edbace3c3db036114a758825f8468 431 SUPERFAMILY SSF50249 10 103 9.64E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_06095 a93edbace3c3db036114a758825f8468 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 386 400 7.4E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_06095 a93edbace3c3db036114a758825f8468 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 346 362 7.4E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_06095 a93edbace3c3db036114a758825f8468 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 181 193 7.4E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_06095 a93edbace3c3db036114a758825f8468 431 PRINTS PR01042 Aspartyl-tRNA synthetase signature 197 210 7.4E-15 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_06095 a93edbace3c3db036114a758825f8468 431 SUPERFAMILY SSF55681 111 425 2.49E-98 T 12-10-2018 BEN31_06095 a93edbace3c3db036114a758825f8468 431 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 2 431 42.117 T 12-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 SMART SM00450 7 109 6.0E-14 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 Pfam PF00753 Metallo-beta-lactamase superfamily 130 291 1.5E-12 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 Gene3D G3DSA:3.40.250.10 2 113 4.5E-17 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 SUPERFAMILY SSF56281 124 368 4.06E-40 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 SMART SM00849 130 294 7.3E-26 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 Gene3D G3DSA:3.60.15.10 119 355 1.9E-47 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 Pfam PF00581 Rhodanese-like domain 8 105 1.3E-9 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_14535 1b3cd066b4da22be8d500e6c26c768d3 375 SUPERFAMILY SSF52821 2 110 2.49E-17 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 Gene3D G3DSA:3.50.50.60 115 226 5.2E-86 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 282 3.3E-24 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-12 T 12-10-2018 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 269 1.8E-12 T 12-10-2018 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.8E-12 T 12-10-2018 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 SUPERFAMILY SSF51905 4 294 9.97E-32 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 Gene3D G3DSA:3.50.50.60 4 287 5.2E-86 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 136 3.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 163 3.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 102 110 3.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 257 275 3.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_12350 30639830bbda11762e1c2d0da0a3773c 304 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 3.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2068 2083 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.40.50.12780 1507 1929 2.7E-149 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF00975 Thioesterase domain 2132 2360 3.1E-32 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.40.50.1820 2035 2377 3.8E-112 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.30.559.30 1231 1488 1.3E-147 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1543 1959 1.1E-137 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 486 883 2.7E-137 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF47336 963 1035 6.02E-20 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 ProSitePatterns PS00012 Phosphopantetheine attachment site. 993 1008 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.30.300.30 1930 2034 2.1E-36 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.30.300.30 855 958 1.9E-38 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1670 1681 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF52777 1055 1227 1.78E-46 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF56801 1481 2057 8.5E-167 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF52777 11 185 8.89E-34 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF00501 AMP-binding enzyme 1522 1935 3.8E-110 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF00501 AMP-binding enzyme 465 861 2.4E-107 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.30.559.10 11 207 2.1E-54 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF00668 Condensation domain 1051 1501 7.6E-105 T 12-10-2018 IPR001242 Condensation domain BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF00668 Condensation domain 8 446 3.3E-79 T 12-10-2018 IPR001242 Condensation domain BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF53474 2111 2375 2.13E-57 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF47336 2038 2109 7.85E-19 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF52777 191 450 4.11E-44 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SMART SM00823 Phosphopantetheine attachment site 2044 2113 4.7E-9 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SMART SM00823 Phosphopantetheine attachment site 969 1038 4.7E-7 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.30.559.30 208 433 1.2E-65 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF56801 428 982 1.31E-167 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 ProSitePatterns PS00455 Putative AMP-binding domain signature. 608 619 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:1.10.1200.10 959 1040 2.5E-27 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.40.50.12780 457 853 4.2E-143 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 SUPERFAMILY SSF52777 1240 1488 2.11E-60 T 12-10-2018 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF13193 AMP-binding enzyme C-terminal domain 1943 2018 3.6E-14 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF13193 AMP-binding enzyme C-terminal domain 869 944 5.1E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Gene3D G3DSA:3.30.559.10 1054 1426 1.3E-147 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF00550 Phosphopantetheine attachment site 2047 2107 6.8E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_15970 fb5024ff9e45f7ece2e99caa91b870dd 2382 Pfam PF00550 Phosphopantetheine attachment site 972 1034 4.0E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_01105 0281b6684c4d995271ec08b7a7d24c2c 616 Pfam PF00884 Sulfatase 241 533 2.7E-36 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BEN31_01105 0281b6684c4d995271ec08b7a7d24c2c 616 Gene3D G3DSA:3.40.720.10 233 543 2.8E-74 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_01105 0281b6684c4d995271ec08b7a7d24c2c 616 SUPERFAMILY SSF53649 239 614 1.03E-71 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_01105 0281b6684c4d995271ec08b7a7d24c2c 616 PIRSF PIRSF005091 1 616 7.9E-176 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00369 Flavodoxin signature 485 498 4.4E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00369 Flavodoxin signature 588 607 4.4E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00369 Flavodoxin signature 563 573 4.4E-9 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 SUPERFAMILY SSF63380 660 884 1.38E-65 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Pfam PF00258 Flavodoxin 486 619 9.3E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Pfam PF00667 FAD binding domain 663 868 8.6E-45 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Gene3D G3DSA:2.40.30.10 671 878 2.8E-70 T 12-10-2018 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PIRSF PIRSF000209 1 1047 0.0 T 12-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Gene3D G3DSA:3.40.50.80 889 1047 6.8E-53 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Gene3D G3DSA:1.10.630.10 4 472 1.3E-168 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Pfam PF00175 Oxidoreductase NAD-binding domain 901 1009 5.7E-12 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 SUPERFAMILY SSF52343 888 1046 5.76E-44 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Pfam PF00067 Cytochrome P450 16 449 1.1E-85 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Gene3D G3DSA:3.40.50.360 481 632 2.4E-41 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 395 404 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 Gene3D G3DSA:1.20.990.10 706 826 2.8E-70 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 972 988 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 863 872 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 942 953 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 696 706 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 929 938 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 828 835 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 900 919 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 995 1003 6.5E-29 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 SUPERFAMILY SSF48264 5 454 1.22E-111 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_07480 b34512a9597f80d3e7596e2d53eb023c 1047 SUPERFAMILY SSF52218 481 634 6.65E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 217 233 2.7E-6 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 315 327 2.7E-6 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 Gene3D G3DSA:3.90.230.10 136 363 2.4E-80 T 12-10-2018 BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 SUPERFAMILY SSF55920 136 363 5.36E-78 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 Gene3D G3DSA:3.40.350.10 1 135 9.4E-38 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 137 2.4E-24 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 Pfam PF00557 Metallopeptidase family M24 146 347 8.5E-64 T 12-10-2018 IPR000994 Peptidase M24 BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 SUPERFAMILY SSF53092 1 135 1.24E-31 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN31_09385 3fa4d53ec28577bcd5042f074c2e747f 364 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 293 305 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BEN31_09360 685a76b624047beb49564d1b55193e6c 572 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 1.4E-25 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 566 8.9E-267 T 12-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 12-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 SUPERFAMILY SSF51621 250 546 2.88E-112 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 SUPERFAMILY SSF47831 23 143 1.96E-37 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.2E-32 T 12-10-2018 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.2E-32 T 12-10-2018 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.2E-32 T 12-10-2018 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.2E-32 T 12-10-2018 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 Gene3D G3DSA:3.50.30.10 6 234 2.5E-80 T 12-10-2018 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 540 9.0E-129 T 12-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 Gene3D G3DSA:3.20.20.60 235 569 1.5E-126 T 12-10-2018 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 4.7E-34 T 12-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 SUPERFAMILY SSF52009 125 246 8.76E-38 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 PIRSF PIRSF000732 1 572 9.6E-228 T 12-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 Gene3D G3DSA:1.10.274.10 23 146 2.5E-80 T 12-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 BEN31_09360 685a76b624047beb49564d1b55193e6c 572 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 12-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 BEN31_13075 4903298685eba826d5ed61ff2b1cd432 179 Pfam PF13302 Acetyltransferase (GNAT) domain 3 141 9.2E-23 T 12-10-2018 IPR000182 GNAT domain BEN31_13075 4903298685eba826d5ed61ff2b1cd432 179 Gene3D G3DSA:3.40.630.30 1 174 1.9E-43 T 12-10-2018 BEN31_13075 4903298685eba826d5ed61ff2b1cd432 179 SUPERFAMILY SSF55729 3 166 4.03E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 SMART SM00838 598 685 1.4E-59 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 SUPERFAMILY SSF54211 477 597 4.05E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 113.281 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 SUPERFAMILY SSF50447 263 402 6.31E-36 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Pfam PF00679 Elongation factor G C-terminus 598 684 3.0E-32 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Gene3D G3DSA:3.40.50.300 1 291 1.3E-113 T 12-10-2018 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Gene3D G3DSA:3.30.70.870 404 481 3.3E-32 T 12-10-2018 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 279 1.5E-69 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 181 2.8E-47 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Pfam PF14492 Elongation Factor G, domain II 402 475 1.4E-35 T 12-10-2018 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Gene3D G3DSA:3.30.70.240 602 672 9.8E-95 T 12-10-2018 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.3E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.3E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 4.3E-17 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 SUPERFAMILY SSF52540 6 279 2.63E-110 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Gene3D G3DSA:3.30.230.10 482 685 9.8E-95 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 SUPERFAMILY SSF54980 400 478 2.95E-25 T 12-10-2018 IPR035647 EF-G domain III/V-like BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 SUPERFAMILY SSF54980 598 688 3.02E-31 T 12-10-2018 IPR035647 EF-G domain III/V-like BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 12-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 7.7E-16 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 SMART SM00889 478 596 1.2E-72 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Gene3D G3DSA:2.40.30.10 292 403 1.7E-46 T 12-10-2018 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 Pfam PF03764 Elongation factor G, domain IV 477 595 3.7E-46 T 12-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 BEN31_15065 14a36d63effc68209036edb2dbe828bc 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BEN31_14250 e200aa6862606ddb94db96aa2bc5c834 233 Gene3D G3DSA:3.40.50.2300 1 125 9.9E-27 T 12-10-2018 BEN31_14250 e200aa6862606ddb94db96aa2bc5c834 233 Gene3D G3DSA:2.40.50.1020 126 226 1.7E-13 T 12-10-2018 BEN31_14250 e200aa6862606ddb94db96aa2bc5c834 233 Pfam PF00072 Response regulator receiver domain 6 113 8.5E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_14250 e200aa6862606ddb94db96aa2bc5c834 233 SMART SM00448 2 113 7.6E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_14250 e200aa6862606ddb94db96aa2bc5c834 233 Pfam PF04397 LytTr DNA-binding domain 136 230 5.9E-20 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN31_14250 e200aa6862606ddb94db96aa2bc5c834 233 SUPERFAMILY SSF52172 1 122 1.22E-25 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_14250 e200aa6862606ddb94db96aa2bc5c834 233 SMART SM00850 135 233 1.1E-19 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 SUPERFAMILY SSF81333 3 69 6.15E-20 T 12-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 Pfam PF00137 ATP synthase subunit C 4 66 3.5E-15 T 12-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 15.972 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 9.0E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 9.0E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 9.0E-20 T 12-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 12-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 69 1.9E-22 T 12-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BEN31_17610 6b2b43de5e9f3e673a321267b85efc30 70 Gene3D G3DSA:1.20.20.10 1 68 1.8E-28 T 12-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_14925 d8a191d5249abd95e0508039b5f500a5 72 Gene3D G3DSA:2.40.50.140 1 72 2.2E-38 T 12-10-2018 BEN31_14925 d8a191d5249abd95e0508039b5f500a5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.386 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BEN31_14925 d8a191d5249abd95e0508039b5f500a5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.6E-39 T 12-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 BEN31_14925 d8a191d5249abd95e0508039b5f500a5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.7E-29 T 12-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 BEN31_14925 d8a191d5249abd95e0508039b5f500a5 72 SUPERFAMILY SSF50249 1 71 5.14E-29 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_14925 d8a191d5249abd95e0508039b5f500a5 72 SMART SM00316 4 72 2.8E-6 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_03145 0746ba8c8b0ac18aea50631646a864ac 171 PIRSF PIRSF006443 1 170 7.5E-65 T 12-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 BEN31_03145 0746ba8c8b0ac18aea50631646a864ac 171 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 16 157 7.9E-36 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_03145 0746ba8c8b0ac18aea50631646a864ac 171 Pfam PF00994 Probable molybdopterin binding domain 18 161 5.2E-34 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_03145 0746ba8c8b0ac18aea50631646a864ac 171 SUPERFAMILY SSF53218 11 166 3.93E-40 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN31_03145 0746ba8c8b0ac18aea50631646a864ac 171 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 12-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 BEN31_03145 0746ba8c8b0ac18aea50631646a864ac 171 Gene3D G3DSA:3.40.980.10 1 169 8.5E-48 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN31_03145 0746ba8c8b0ac18aea50631646a864ac 171 SMART SM00852 17 162 4.6E-25 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 Gene3D G3DSA:3.40.50.720 2 267 3.6E-54 T 12-10-2018 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 SUPERFAMILY SSF48179 271 475 7.82E-40 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 170 2.6E-21 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 202 448 4.6E-50 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 Gene3D G3DSA:1.10.1040.10 270 475 4.6E-52 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 PRINTS PR00084 Mannitol dehydrogenase signature 18 28 1.2E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 PRINTS PR00084 Mannitol dehydrogenase signature 233 248 1.2E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 PRINTS PR00084 Mannitol dehydrogenase signature 162 175 1.2E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 PRINTS PR00084 Mannitol dehydrogenase signature 203 216 1.2E-5 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_01170 ca548b466dae4d27d401516f84344c5f 485 SUPERFAMILY SSF51735 4 266 2.91E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05715 ef0d947fc886f3aa9c2f99913e91bf9e 240 SMART SM00862 158 235 1.3E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_05715 ef0d947fc886f3aa9c2f99913e91bf9e 240 SMART SM00448 7 117 8.0E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_05715 ef0d947fc886f3aa9c2f99913e91bf9e 240 Pfam PF00072 Response regulator receiver domain 9 117 5.8E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_05715 ef0d947fc886f3aa9c2f99913e91bf9e 240 Gene3D G3DSA:3.40.50.2300 1 128 2.0E-42 T 12-10-2018 BEN31_05715 ef0d947fc886f3aa9c2f99913e91bf9e 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 235 5.1E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_05715 ef0d947fc886f3aa9c2f99913e91bf9e 240 Gene3D G3DSA:1.10.10.10 129 238 3.9E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05715 ef0d947fc886f3aa9c2f99913e91bf9e 240 SUPERFAMILY SSF52172 6 193 3.42E-44 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 SUPERFAMILY SSF53633 2 290 4.58E-63 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 Pfam PF13840 ACT domain 382 445 2.3E-6 T 12-10-2018 IPR027795 CASTOR, ACT domain BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 PIRSF PIRSF000726 1 454 1.3E-71 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 Gene3D G3DSA:3.40.1160.10 3 287 1.4E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 Gene3D G3DSA:3.30.2130.10 289 453 7.7E-53 T 12-10-2018 BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 Gene3D G3DSA:1.20.120.1320 39 135 1.4E-72 T 12-10-2018 BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 SUPERFAMILY SSF55021 296 360 1.83E-7 T 12-10-2018 BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 1.1E-75 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 Pfam PF00696 Amino acid kinase family 2 276 2.1E-36 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN31_13760 9ee7b7c27ff2e743025508cb31bd437a 458 SUPERFAMILY SSF55021 377 449 2.75E-19 T 12-10-2018 BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 178 206 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 119 130 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 191 210 2.1E-10 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 Gene3D G3DSA:3.40.50.720 2 283 2.1E-85 T 12-10-2018 BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 SUPERFAMILY SSF51735 42 284 5.95E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 246 266 2.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 229 2.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 210 2.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 130 2.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 44 61 2.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 181 2.7E-37 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10800 d744258ff9ca7b983f17c8aec46b4494 286 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 52 281 3.3E-58 T 12-10-2018 BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 SUPERFAMILY SSF53850 84 282 3.57E-28 T 12-10-2018 BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 Gene3D G3DSA:3.40.190.290 80 279 3.2E-29 T 12-10-2018 BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 Pfam PF03466 LysR substrate binding domain 83 280 3.5E-29 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 SUPERFAMILY SSF46785 2 80 1.28E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 Gene3D G3DSA:1.10.10.10 1 79 8.6E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07275 4d3c2b3ad0f3dac420b40e104d6df40d 284 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.1E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_04150 c7c7db27a314052b6532c543deab16cd 580 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 215 3.6E-9 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN31_04150 c7c7db27a314052b6532c543deab16cd 580 SUPERFAMILY SSF56601 184 573 2.91E-58 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_04150 c7c7db27a314052b6532c543deab16cd 580 Gene3D G3DSA:3.90.1310.30 50 228 5.5E-16 T 12-10-2018 BEN31_04150 c7c7db27a314052b6532c543deab16cd 580 SUPERFAMILY SSF56519 50 219 9.55E-20 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN31_04150 c7c7db27a314052b6532c543deab16cd 580 Pfam PF00905 Penicillin binding protein transpeptidase domain 259 569 3.4E-52 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_04150 c7c7db27a314052b6532c543deab16cd 580 Gene3D G3DSA:3.40.710.10 233 580 1.2E-66 T 12-10-2018 BEN31_14645 23fdae2069e966bd2f1f2c7dd922a2ba 254 Pfam PF12679 ABC-2 family transporter protein 2 252 8.9E-10 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BEN31_08020 2ba00fea2ebeb0abec2e89077b47bfc7 419 Pfam PF02163 Peptidase family M50 6 405 1.5E-80 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BEN31_08020 2ba00fea2ebeb0abec2e89077b47bfc7 419 SMART SM00228 189 258 0.0031 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_08020 2ba00fea2ebeb0abec2e89077b47bfc7 419 Gene3D G3DSA:2.30.42.10 201 288 9.9E-20 T 12-10-2018 BEN31_08020 2ba00fea2ebeb0abec2e89077b47bfc7 419 Pfam PF13180 PDZ domain 207 265 1.3E-7 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_08020 2ba00fea2ebeb0abec2e89077b47bfc7 419 SUPERFAMILY SSF50156 173 266 1.58E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_08020 2ba00fea2ebeb0abec2e89077b47bfc7 419 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 418 7.3E-131 T 12-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 BEN31_09880 b7b9ecf7bba2a0ca464eaddb4e710a3d 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 151 1.1E-35 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_09880 b7b9ecf7bba2a0ca464eaddb4e710a3d 155 SUPERFAMILY SSF55804 7 151 6.28E-41 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_09880 b7b9ecf7bba2a0ca464eaddb4e710a3d 155 Gene3D G3DSA:3.40.930.10 2 155 2.4E-50 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_01385 0f367fac87ae41db2d0f19dbdf05ee91 406 Gene3D G3DSA:3.40.640.10 34 294 7.9E-185 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_01385 0f367fac87ae41db2d0f19dbdf05ee91 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 402 2.7E-191 T 12-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BEN31_01385 0f367fac87ae41db2d0f19dbdf05ee91 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN31_01385 0f367fac87ae41db2d0f19dbdf05ee91 406 Pfam PF00266 Aminotransferase class-V 23 391 7.3E-164 T 12-10-2018 IPR000192 Aminotransferase class V domain BEN31_01385 0f367fac87ae41db2d0f19dbdf05ee91 406 PIRSF PIRSF005572 20 405 2.5E-52 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BEN31_01385 0f367fac87ae41db2d0f19dbdf05ee91 406 SUPERFAMILY SSF53383 2 398 2.55E-135 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_01385 0f367fac87ae41db2d0f19dbdf05ee91 406 Gene3D G3DSA:3.90.1150.10 6 395 7.9E-185 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 416 170.486 T 12-10-2018 IPR008135 Competence-induced protein CinA BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 PIRSF PIRSF006728 4 416 8.9E-165 T 12-10-2018 IPR008135 Competence-induced protein CinA BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 SUPERFAMILY SSF142433 254 414 1.57E-49 T 12-10-2018 IPR036653 CinA-like, C-terminal BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 Pfam PF02464 Competence-damaged protein 261 412 3.1E-51 T 12-10-2018 IPR008136 CinA, C-terminal BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 Pfam PF00994 Probable molybdopterin binding domain 8 172 1.7E-35 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 Gene3D G3DSA:3.90.950.20 256 414 1.9E-51 T 12-10-2018 IPR036653 CinA-like, C-terminal BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 Gene3D G3DSA:3.40.980.10 4 173 6.4E-52 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 6 170 2.0E-37 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 268 411 7.7E-47 T 12-10-2018 IPR008136 CinA, C-terminal BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 6 415 1.7E-178 T 12-10-2018 IPR008135 Competence-induced protein CinA BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 SMART SM00852 8 175 1.6E-41 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_07805 b363b57dae6bb3fd2cfc23c7d6bd376d 416 SUPERFAMILY SSF53218 6 210 3.14E-41 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN31_15435 49ead287726097ba40e7db91b9240dfa 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 4.8E-39 T 12-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 BEN31_15435 49ead287726097ba40e7db91b9240dfa 76 ProDom PD057826 YABK 4 76 2.0E-32 T 12-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 BEN31_07070 2ff7abae054daab97d003dc778b88ff7 304 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 4.0E-102 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 BEN31_07070 2ff7abae054daab97d003dc778b88ff7 304 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 2.4E-100 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BEN31_07070 2ff7abae054daab97d003dc778b88ff7 304 PIRSF PIRSF000535 1 304 2.3E-77 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BEN31_07070 2ff7abae054daab97d003dc778b88ff7 304 Pfam PF00294 pfkB family carbohydrate kinase 11 287 4.7E-48 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BEN31_07070 2ff7abae054daab97d003dc778b88ff7 304 SUPERFAMILY SSF53613 2 302 1.39E-61 T 12-10-2018 IPR029056 Ribokinase-like BEN31_07070 2ff7abae054daab97d003dc778b88ff7 304 Gene3D G3DSA:3.40.1190.20 1 304 9.3E-92 T 12-10-2018 IPR029056 Ribokinase-like BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 SUPERFAMILY SSF51905 7 261 3.32E-46 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 Gene3D G3DSA:3.50.50.60 296 458 1.2E-56 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 Gene3D G3DSA:3.50.50.60 2 221 4.7E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 Gene3D G3DSA:1.10.150.570 568 620 1.8E-23 T 12-10-2018 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 6.7E-299 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 SMART SM01228 545 616 2.5E-41 T 12-10-2018 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.383 T 12-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 Pfam PF01134 Glucose inhibited division protein A 9 399 1.5E-170 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 Pfam PF13932 GidA associated domain 401 615 3.5E-79 T 12-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 BEN31_15800 9cbee9ad2ce4f301226a6c1dcf3f7210 628 Gene3D G3DSA:1.10.10.1800 459 549 4.4E-26 T 12-10-2018 BEN31_18690 c6b8c33e6e82936c5010a272c8abbe67 326 SUPERFAMILY SSF56349 25 315 1.61E-51 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN31_18690 c6b8c33e6e82936c5010a272c8abbe67 326 Pfam PF00589 Phage integrase family 135 305 5.0E-33 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN31_18690 c6b8c33e6e82936c5010a272c8abbe67 326 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 31 114 2.6E-8 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BEN31_18690 c6b8c33e6e82936c5010a272c8abbe67 326 Gene3D G3DSA:1.10.150.130 21 132 6.6E-10 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BEN31_18690 c6b8c33e6e82936c5010a272c8abbe67 326 Gene3D G3DSA:1.10.443.10 133 313 3.6E-41 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 129 148 5.7E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 166 179 5.7E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 324 340 5.7E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 Pfam PF05922 Peptidase inhibitor I9 41 104 1.9E-5 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 325 335 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 Gene3D G3DSA:3.30.70.80 32 108 8.7E-23 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 134 145 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 SUPERFAMILY SSF54897 38 105 4.19E-20 T 12-10-2018 BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 Pfam PF00082 Subtilase family 129 372 3.1E-59 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 SUPERFAMILY SSF52743 107 379 1.57E-90 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 170 180 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_10820 fc96c1e1cabb3c70db5afb2f363a9c6a 381 Gene3D G3DSA:3.40.50.200 109 381 1.8E-107 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 SMART SM00850 146 243 4.2E-34 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 SMART SM00448 2 113 7.2E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 Pfam PF04397 LytTr DNA-binding domain 147 242 3.2E-27 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 Pfam PF00072 Response regulator receiver domain 4 113 9.3E-24 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 Gene3D G3DSA:2.20.25.10 207 244 8.3E-8 T 12-10-2018 BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 SUPERFAMILY SSF52172 3 154 2.56E-30 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 Gene3D G3DSA:3.40.50.2300 1 133 4.3E-31 T 12-10-2018 BEN31_03350 0aee24b58cac230f0bb55876432306a1 245 Gene3D G3DSA:2.40.50.40 137 206 2.9E-15 T 12-10-2018 BEN31_10955 9ad559c2007ea21e4f0da3aff16603af 114 Pfam PF08963 Protein of unknown function (DUF1878) 2 109 5.7E-46 T 12-10-2018 IPR015058 Protein of unknown function DUF1878 BEN31_10955 9ad559c2007ea21e4f0da3aff16603af 114 ProDom PD073069 YHAI 3D-STRUCTURE 9 112 1.0E-33 T 12-10-2018 IPR015058 Protein of unknown function DUF1878 BEN31_10955 9ad559c2007ea21e4f0da3aff16603af 114 Gene3D G3DSA:1.10.3750.10 1 114 8.1E-37 T 12-10-2018 IPR035945 YhaI-like superfamily BEN31_10955 9ad559c2007ea21e4f0da3aff16603af 114 SUPERFAMILY SSF109915 1 112 1.14E-44 T 12-10-2018 IPR035945 YhaI-like superfamily BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 180 485 3.9E-119 T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 494 36.572 T 12-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 Gene3D G3DSA:3.40.630.10 166 492 2.2E-130 T 12-10-2018 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 SUPERFAMILY SSF53187 176 490 5.96E-114 T 12-10-2018 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 341 348 - T 12-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 PRINTS PR00481 Cytosol aminopeptidase signature 256 273 3.3E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 3.3E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 PRINTS PR00481 Cytosol aminopeptidase signature 315 336 3.3E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 PRINTS PR00481 Cytosol aminopeptidase signature 337 357 3.3E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 PRINTS PR00481 Cytosol aminopeptidase signature 365 380 3.3E-50 T 12-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 SUPERFAMILY SSF52949 9 178 1.71E-34 T 12-10-2018 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 15 142 1.2E-25 T 12-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 BEN31_01635 ca6519b3d2f045e6fe4a9884197b28da 496 Gene3D G3DSA:3.40.220.10 1 152 8.5E-40 T 12-10-2018 BEN31_08450 94aa18aaea0abca33fb14e54d14a976d 405 Gene3D G3DSA:3.40.50.10300 186 403 3.3E-83 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BEN31_08450 94aa18aaea0abca33fb14e54d14a976d 405 Pfam PF02441 Flavoprotein 5 177 6.0E-48 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BEN31_08450 94aa18aaea0abca33fb14e54d14a976d 405 SUPERFAMILY SSF52507 1 179 7.72E-63 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BEN31_08450 94aa18aaea0abca33fb14e54d14a976d 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 393 3.0E-158 T 12-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 BEN31_08450 94aa18aaea0abca33fb14e54d14a976d 405 SUPERFAMILY SSF102645 186 399 3.01E-75 T 12-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BEN31_08450 94aa18aaea0abca33fb14e54d14a976d 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 369 1.3E-73 T 12-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 BEN31_08450 94aa18aaea0abca33fb14e54d14a976d 405 Gene3D G3DSA:3.40.50.1950 1 185 3.2E-62 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BEN31_17585 04ddfb6c1cadb6e694b018ba15fcd9eb 179 Hamap MF_00800 UPF0340 protein . 1 179 91.742 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BEN31_17585 04ddfb6c1cadb6e694b018ba15fcd9eb 179 SUPERFAMILY SSF110710 2 177 2.62E-76 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like BEN31_17585 04ddfb6c1cadb6e694b018ba15fcd9eb 179 Pfam PF04260 Protein of unknown function (DUF436) 8 176 1.5E-78 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BEN31_17585 04ddfb6c1cadb6e694b018ba15fcd9eb 179 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 13 176 1.0E-63 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BEN31_17585 04ddfb6c1cadb6e694b018ba15fcd9eb 179 Gene3D G3DSA:3.40.50.10360 1 179 1.2E-79 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like BEN31_17585 04ddfb6c1cadb6e694b018ba15fcd9eb 179 PIRSF PIRSF007510 1 179 1.2E-79 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BEN31_17585 04ddfb6c1cadb6e694b018ba15fcd9eb 179 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 9 176 3.9E-72 T 12-10-2018 IPR006340 Protein of unknown function DUF436 BEN31_00690 3f588fd39350fc5a14a64b6c5485b1ad 96 SUPERFAMILY SSF89447 2 49 2.22E-13 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN31_00690 3f588fd39350fc5a14a64b6c5485b1ad 96 Gene3D G3DSA:2.10.260.10 1 54 3.4E-20 T 12-10-2018 BEN31_00690 3f588fd39350fc5a14a64b6c5485b1ad 96 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 11 50 3.6E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_00690 3f588fd39350fc5a14a64b6c5485b1ad 96 SMART SM00966 8 51 7.0E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_00690 3f588fd39350fc5a14a64b6c5485b1ad 96 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 10 49 2.2E-9 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 Pfam PF04542 Sigma-70 region 2 9 74 1.1E-16 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 Gene3D G3DSA:1.10.1740.10 1 71 1.2E-24 T 12-10-2018 BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 SUPERFAMILY SSF88659 98 166 1.31E-12 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 Pfam PF08281 Sigma-70, region 4 110 159 2.0E-9 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 165 4.2E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 Gene3D G3DSA:1.10.10.10 90 167 2.8E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_05725 7a1ce324af7e0910979842e9a320dd96 202 SUPERFAMILY SSF88946 3 90 1.61E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 Gene3D G3DSA:3.40.50.2300 2 133 2.2E-33 T 12-10-2018 BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 Pfam PF00072 Response regulator receiver domain 6 116 1.1E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 231 8.0E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 SUPERFAMILY SSF46894 131 232 9.92E-26 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 SMART SM00862 155 231 6.4E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 Gene3D G3DSA:1.10.10.10 134 238 1.4E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 SMART SM00448 4 115 1.7E-38 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01150 9613b732dfac9d9f812f26b8f1a70c70 240 SUPERFAMILY SSF52172 3 133 9.53E-36 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_04375 ca68a1cb1573010d40ba9054dac6c462 470 Pfam PF01522 Polysaccharide deacetylase 273 387 3.8E-31 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_04375 ca68a1cb1573010d40ba9054dac6c462 470 Gene3D G3DSA:3.30.565.40 41 149 1.0E-11 T 12-10-2018 BEN31_04375 ca68a1cb1573010d40ba9054dac6c462 470 Pfam PF13739 Domain of unknown function (DUF4163) 55 134 4.7E-7 T 12-10-2018 IPR025303 Deacetylase PdaC BEN31_04375 ca68a1cb1573010d40ba9054dac6c462 470 Pfam PF11738 Protein of unknown function (DUF3298) 154 231 4.8E-5 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 BEN31_04375 ca68a1cb1573010d40ba9054dac6c462 470 SUPERFAMILY SSF88713 267 457 8.23E-57 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_04375 ca68a1cb1573010d40ba9054dac6c462 470 Gene3D G3DSA:3.20.20.370 236 458 9.5E-62 T 12-10-2018 BEN31_04375 ca68a1cb1573010d40ba9054dac6c462 470 Gene3D G3DSA:3.90.640.20 152 235 4.5E-15 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 150 163 3.8E-43 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 166 179 3.8E-43 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 194 203 3.8E-43 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 110 128 3.8E-43 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 85 96 3.8E-43 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 131 147 3.8E-43 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 3 145 6.9E-64 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 SUPERFAMILY SSF52096 3 310 1.71E-94 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 311 3.0E-148 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 Gene3D G3DSA:3.90.226.10 1 312 1.3E-117 T 12-10-2018 BEN31_10070 07bbfb0ca1384223a88ac6140f3c659a 313 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 2 313 47.482 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_15300 c414e0b00716a0d64f7a64b9e4eb8701 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN31_15300 c414e0b00716a0d64f7a64b9e4eb8701 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 2.4E-49 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN31_15300 c414e0b00716a0d64f7a64b9e4eb8701 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 1.5E-38 T 12-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN31_15300 c414e0b00716a0d64f7a64b9e4eb8701 167 SUPERFAMILY SSF55083 3 136 3.79E-51 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN31_15300 c414e0b00716a0d64f7a64b9e4eb8701 167 Gene3D G3DSA:3.30.70.560 1 152 4.7E-55 T 12-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 BEN31_13570 6bca5488ea833dbe2e7118957be136d9 98 Pfam PF12823 Domain of unknown function (DUF3817) 6 92 1.2E-20 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BEN31_13570 6bca5488ea833dbe2e7118957be136d9 98 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 9 91 3.5E-26 T 12-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane BEN31_15780 dec6f75c7e67de2603565ae487142c17 119 SUPERFAMILY SSF54211 1 113 1.34E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_15780 dec6f75c7e67de2603565ae487142c17 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 101 3.0E-38 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN31_15780 dec6f75c7e67de2603565ae487142c17 119 Pfam PF00825 Ribonuclease P 1 107 2.1E-35 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN31_15780 dec6f75c7e67de2603565ae487142c17 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 111 20.728 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN31_15780 dec6f75c7e67de2603565ae487142c17 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 111 1.4E-37 T 12-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 BEN31_15780 dec6f75c7e67de2603565ae487142c17 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 12-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 BEN31_15780 dec6f75c7e67de2603565ae487142c17 119 Gene3D G3DSA:3.30.230.10 1 117 2.0E-41 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_09475 c0e441d6cda0b6d2a429c474de248efe 80 Pfam PF09388 Spo0E like sporulation regulatory protein 10 50 4.8E-14 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 BEN31_09475 c0e441d6cda0b6d2a429c474de248efe 80 SUPERFAMILY SSF140500 6 57 5.1E-15 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BEN31_09475 c0e441d6cda0b6d2a429c474de248efe 80 Gene3D G3DSA:1.20.58.990 6 65 5.1E-10 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 2.9E-32 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 Gene3D G3DSA:3.40.50.720 7 264 4.2E-78 T 12-10-2018 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 SUPERFAMILY SSF51735 4 156 5.73E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 Gene3D G3DSA:3.30.360.10 131 236 4.2E-78 T 12-10-2018 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 SUPERFAMILY SSF55347 130 238 1.31E-38 T 12-10-2018 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 PIRSF PIRSF000161 4 267 1.3E-72 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 267 30.288 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 2.5E-92 T 12-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 12-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_06035 839a56f43ade71d0bb863fe23efb5da4 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 265 3.7E-32 T 12-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_07955 d4126180403e3420c71cff29cc9bbea2 116 SUPERFAMILY SSF89919 2 110 3.66E-37 T 12-10-2018 IPR023799 Ribosome-binding factor A domain superfamily BEN31_07955 d4126180403e3420c71cff29cc9bbea2 116 Gene3D G3DSA:3.30.300.20 1 115 9.5E-40 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_07955 d4126180403e3420c71cff29cc9bbea2 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 12-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 BEN31_07955 d4126180403e3420c71cff29cc9bbea2 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 107 28.957 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN31_07955 d4126180403e3420c71cff29cc9bbea2 116 Pfam PF02033 Ribosome-binding factor A 4 107 6.2E-35 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN31_07955 d4126180403e3420c71cff29cc9bbea2 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 94 2.0E-42 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN31_07955 d4126180403e3420c71cff29cc9bbea2 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 2.4E-43 T 12-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 BEN31_12500 ed2cc03277332ae4b1766ec4a1d04319 236 Gene3D G3DSA:3.40.50.1820 1 233 3.3E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_12500 ed2cc03277332ae4b1766ec4a1d04319 236 Pfam PF00975 Thioesterase domain 2 225 1.4E-39 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BEN31_12500 ed2cc03277332ae4b1766ec4a1d04319 236 SUPERFAMILY SSF53474 3 224 2.27E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_14830 b2a8146331e884770a72ad04a867efe3 352 Gene3D G3DSA:3.40.50.300 99 321 7.8E-68 T 12-10-2018 BEN31_14830 b2a8146331e884770a72ad04a867efe3 352 Hamap MF_02040 Iron-sulfur cluster carrier protein. 97 345 33.576 T 12-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein BEN31_14830 b2a8146331e884770a72ad04a867efe3 352 SUPERFAMILY SSF52540 108 348 1.75E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14830 b2a8146331e884770a72ad04a867efe3 352 ProSitePatterns PS01215 Mrp family signature. 210 226 - T 12-10-2018 IPR000808 Mrp, conserved site GO:0005524 BEN31_14830 b2a8146331e884770a72ad04a867efe3 352 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 108 344 4.2E-86 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Pfam PF00550 Phosphopantetheine attachment site 2068 2128 8.3E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Pfam PF00550 Phosphopantetheine attachment site 927 989 1.2E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:3.30.559.10 1011 1366 6.8E-131 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 1642 1754 3.9E-16 T 12-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:1.10.1200.10 2054 2136 6.7E-16 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:1.10.1200.10 913 1000 1.3E-24 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF55729 1829 1941 1.47E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SMART SM00825 Beta-ketoacyl synthase 13 438 4.3E-178 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF55048 663 723 4.97E-9 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF52151 534 828 1.02E-67 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:3.40.50.1000 1641 1800 2.4E-47 T 12-10-2018 IPR023214 HAD superfamily BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:3.40.366.10 535 838 1.6E-147 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Pfam PF00668 Condensation domain 1007 1439 2.1E-111 T 12-10-2018 IPR001242 Condensation domain BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF47336 2057 2129 7.33E-14 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 TIGRFAM TIGR01686 FkbH: FkbH domain 1642 1960 1.8E-83 T 12-10-2018 IPR010037 FkbH domain BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 388 495 5.4E-22 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Pfam PF00698 Acyl transferase domain 535 824 8.4E-52 T 12-10-2018 IPR014043 Acyl transferase BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF53901 9 434 1.34E-85 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 ProSitePatterns PS00012 Phosphopantetheine attachment site. 949 964 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF56784 1641 1753 1.24E-6 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 269 386 2.2E-44 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF47336 920 1022 1.07E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:3.30.70.3290 452 883 1.6E-147 T 12-10-2018 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 12 261 1.5E-69 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 537 832 1.4E-102 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SMART SM00823 Phosphopantetheine attachment site 925 994 6.6E-4 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 174 190 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF52777 1005 1193 3.0E-44 T 12-10-2018 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:3.30.559.30 1179 1425 6.8E-131 T 12-10-2018 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 SUPERFAMILY SSF52777 1183 1431 1.78E-50 T 12-10-2018 BEN31_12455 2aee97bfd7749df14be39942cfbe70d8 2136 Gene3D G3DSA:3.40.47.10 8 438 4.1E-162 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_14285 3b8b05ceaa5ca7e11f7d3b7102fb5f9e 326 Gene3D G3DSA:1.10.1500.10 70 207 7.5E-122 T 12-10-2018 BEN31_14285 3b8b05ceaa5ca7e11f7d3b7102fb5f9e 326 Pfam PF04960 Glutaminase 31 326 1.3E-106 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN31_14285 3b8b05ceaa5ca7e11f7d3b7102fb5f9e 326 Gene3D G3DSA:3.40.710.10 42 326 7.5E-122 T 12-10-2018 BEN31_14285 3b8b05ceaa5ca7e11f7d3b7102fb5f9e 326 Hamap MF_00313 Glutaminase [glsA]. 13 326 44.238 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN31_14285 3b8b05ceaa5ca7e11f7d3b7102fb5f9e 326 TIGRFAM TIGR03814 Gln_ase: glutaminase A 17 326 1.7E-120 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN31_14285 3b8b05ceaa5ca7e11f7d3b7102fb5f9e 326 SUPERFAMILY SSF56601 11 326 1.24E-119 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 SUPERFAMILY SSF57716 222 274 3.03E-16 T 12-10-2018 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 Gene3D G3DSA:1.10.8.50 136 275 1.5E-47 T 12-10-2018 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 44.936 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 SUPERFAMILY SSF81624 2 139 6.28E-44 T 12-10-2018 IPR035937 MutM-like, N-terminal BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 2.4E-36 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 SMART SM00898 2 118 1.5E-53 T 12-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 Pfam PF06827 Zinc finger found in FPG and IleRS 246 275 1.3E-9 T 12-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 12-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 6.5E-32 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 SUPERFAMILY SSF46946 135 227 1.28E-29 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 SMART SM01232 134 226 6.4E-45 T 12-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 1.1E-113 T 12-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 BEN31_03275 5335480bf2bb8c4f8217a9c9dea37b5b 277 Gene3D G3DSA:3.20.190.10 1 135 1.9E-43 T 12-10-2018 IPR035937 MutM-like, N-terminal BEN31_13865 c27d1fcb5136531ceeb6fded9fe8c742 229 SUPERFAMILY SSF52540 2 206 1.08E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_13865 c27d1fcb5136531ceeb6fded9fe8c742 229 Pfam PF00005 ABC transporter 23 153 1.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_13865 c27d1fcb5136531ceeb6fded9fe8c742 229 Gene3D G3DSA:3.40.50.300 1 227 6.0E-52 T 12-10-2018 BEN31_13865 c27d1fcb5136531ceeb6fded9fe8c742 229 SMART SM00382 27 202 3.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_10980 83d714a62b4bd50e0a8d0ded404773bd 315 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 1 313 63.65 T 12-10-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 BEN31_10980 83d714a62b4bd50e0a8d0ded404773bd 315 Gene3D G3DSA:2.40.50.140 22 100 3.3E-8 T 12-10-2018 BEN31_10980 83d714a62b4bd50e0a8d0ded404773bd 315 Pfam PF01966 HD domain 161 278 1.5E-11 T 12-10-2018 IPR006674 HD domain BEN31_10980 83d714a62b4bd50e0a8d0ded404773bd 315 SUPERFAMILY SSF109604 146 280 1.32E-15 T 12-10-2018 BEN31_10980 83d714a62b4bd50e0a8d0ded404773bd 315 SMART SM00471 156 288 8.0E-6 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_10980 83d714a62b4bd50e0a8d0ded404773bd 315 Gene3D G3DSA:1.10.3210.10 122 296 4.7E-13 T 12-10-2018 BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 1.3E-72 T 12-10-2018 IPR000150 Cof family GO:0016787 BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 12-10-2018 BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 SUPERFAMILY SSF56784 1 268 1.84E-79 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 Gene3D G3DSA:3.40.50.1000 3 263 4.6E-94 T 12-10-2018 IPR023214 HAD superfamily BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 12-10-2018 BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 Gene3D G3DSA:3.30.1240.10 86 192 4.6E-94 T 12-10-2018 BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 1.0E-31 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_16470 e210a7522b9bf2cd3a5ab4ff9d1a61ea 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 2.2E-72 T 12-10-2018 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 243 264 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 17 42 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 376 395 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 133 145 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 426 447 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 313 334 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 366 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 192 211 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 64 87 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 163 181 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 91 115 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 289 304 1.9E-103 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 26 469 5.3E-147 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 18 521 4.9E-207 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 Gene3D G3DSA:1.20.210.10 2 530 4.7E-205 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 245 299 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08880 77433331e6b5ec3634108db6e18db4e0 623 SUPERFAMILY SSF81442 15 523 4.45E-180 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_05935 7bf84eaf8fd0280ae2ba685c612c482f 127 Pfam PF07736 Chorismate mutase type I 4 119 3.9E-46 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_05935 7bf84eaf8fd0280ae2ba685c612c482f 127 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 4 119 2.6E-44 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_05935 7bf84eaf8fd0280ae2ba685c612c482f 127 SUPERFAMILY SSF55298 1 125 1.18E-46 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_05935 7bf84eaf8fd0280ae2ba685c612c482f 127 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 21 127 2.0E-39 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_05935 7bf84eaf8fd0280ae2ba685c612c482f 127 Gene3D G3DSA:3.30.1330.40 1 127 4.8E-51 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_05935 7bf84eaf8fd0280ae2ba685c612c482f 127 PIRSF PIRSF005965 1 125 1.5E-49 T 12-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_13130 ff47fed23e205cf76b310f5ef1775429 336 Pfam PF12146 Serine aminopeptidase, S33 54 293 1.7E-16 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BEN31_13130 ff47fed23e205cf76b310f5ef1775429 336 SUPERFAMILY SSF53474 33 294 2.7E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13130 ff47fed23e205cf76b310f5ef1775429 336 Gene3D G3DSA:3.40.50.1820 27 331 2.2E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_08360 4d2e333b4c44bd4f3c7134ef457e2aaf 188 Gene3D G3DSA:3.10.129.10 68 188 1.2E-39 T 12-10-2018 BEN31_08360 4d2e333b4c44bd4f3c7134ef457e2aaf 188 Hamap MF_01814 Transcription factor FapR [fapR]. 1 188 39.399 T 12-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 BEN31_08360 4d2e333b4c44bd4f3c7134ef457e2aaf 188 SUPERFAMILY SSF54637 74 183 3.36E-24 T 12-10-2018 IPR029069 HotDog domain superfamily BEN31_08360 4d2e333b4c44bd4f3c7134ef457e2aaf 188 Gene3D G3DSA:1.10.10.10 1 60 4.3E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08360 4d2e333b4c44bd4f3c7134ef457e2aaf 188 PIRSF PIRSF037733 1 188 6.7E-85 T 12-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 SUPERFAMILY SSF51971 151 421 3.35E-61 T 12-10-2018 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 Gene3D G3DSA:1.10.1060.10 7 151 8.8E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 SUPERFAMILY SSF46548 2 163 8.37E-35 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 475 5.6E-26 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 1.3E-24 T 12-10-2018 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 1.3E-24 T 12-10-2018 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 1.3E-24 T 12-10-2018 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 1.3E-24 T 12-10-2018 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 140 2.9E-21 T 12-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 Gene3D G3DSA:3.50.50.60 152 277 9.7E-35 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 Gene3D G3DSA:3.50.50.60 289 493 1.2E-14 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06830 29c2312ce692427cb2d58c339ff64173 494 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 493 6.6E-251 T 12-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 424 8.7E-141 T 12-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 Pfam PF04055 Radical SAM superfamily 149 319 1.0E-28 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 Gene3D G3DSA:3.80.30.20 140 374 5.1E-87 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 SUPERFAMILY SSF102114 126 363 3.14E-57 T 12-10-2018 BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 432 2.5E-150 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 1.1E-25 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 SMART SM00729 143 361 1.3E-59 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 Gene3D G3DSA:3.40.50.12160 3 132 2.0E-24 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 Pfam PF01938 TRAM domain 396 434 2.2E-4 T 12-10-2018 IPR002792 TRAM domain BEN31_04585 0a9d647e0c9a5ce3824bf4591209cd24 452 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 Gene3D G3DSA:3.30.70.580 62 231 8.9E-56 T 12-10-2018 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 SUPERFAMILY SSF55174 1 59 4.51E-13 T 12-10-2018 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 SUPERFAMILY SSF55120 45 234 3.91E-39 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 Gene3D G3DSA:3.30.70.1560 129 213 8.9E-56 T 12-10-2018 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 228 2.6E-45 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 Gene3D G3DSA:3.10.290.10 1 59 2.7E-18 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 Pfam PF00849 RNA pseudouridylate synthase 62 195 6.8E-17 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 SMART SM00363 1 60 9.6E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_02785 3ddc436bcf2babfb1b0bf3bd380046d0 238 Pfam PF01479 S4 domain 1 48 2.0E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_08980 bce46620301bbcd09795526e61e9df43 89 Gene3D G3DSA:1.10.220.80 12 89 1.1E-29 T 12-10-2018 IPR023324 BH2638-like superfamily BEN31_08980 bce46620301bbcd09795526e61e9df43 89 Hamap MF_01041 UPF0223 protein . 1 89 25.734 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BEN31_08980 bce46620301bbcd09795526e61e9df43 89 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 86 1.3E-37 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BEN31_08980 bce46620301bbcd09795526e61e9df43 89 PIRSF PIRSF037260 1 89 1.5E-37 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BEN31_08980 bce46620301bbcd09795526e61e9df43 89 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 89 4.0E-27 T 12-10-2018 IPR007920 Protein of unknown function UPF0223 BEN31_08980 bce46620301bbcd09795526e61e9df43 89 SUPERFAMILY SSF158504 4 85 3.53E-33 T 12-10-2018 IPR023324 BH2638-like superfamily BEN31_05700 cb2db1fb4ddb07f95daa74f3e710eb29 176 Pfam PF00578 AhpC/TSA family 38 152 8.6E-34 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_05700 cb2db1fb4ddb07f95daa74f3e710eb29 176 SUPERFAMILY SSF52833 9 168 1.76E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_05700 cb2db1fb4ddb07f95daa74f3e710eb29 176 Gene3D G3DSA:3.40.30.10 36 174 8.2E-46 T 12-10-2018 BEN31_05700 cb2db1fb4ddb07f95daa74f3e710eb29 176 ProSitePatterns PS00194 Thioredoxin family active site. 65 83 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 Gene3D G3DSA:3.30.450.20 183 264 9.6E-38 T 12-10-2018 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 Gene3D G3DSA:3.30.450.20 90 182 9.6E-38 T 12-10-2018 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 Pfam PF02743 Cache domain 36 258 3.4E-31 T 12-10-2018 IPR033479 Double Cache domain 1 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 444 605 3.2E-37 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 Pfam PF00672 HAMP domain 296 344 5.7E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 SMART SM00304 296 348 2.3E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 Gene3D G3DSA:1.20.1480.50 265 354 1.4E-18 T 12-10-2018 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 SUPERFAMILY SSF103190 93 192 4.71E-10 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 Gene3D G3DSA:1.10.287.950 374 652 4.3E-60 T 12-10-2018 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 SUPERFAMILY SSF58104 316 652 9.29E-66 T 12-10-2018 BEN31_09345 99c115d8dc6010a06f6af1aa2f3132a6 653 SMART SM00283 377 652 1.0E-68 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_10975 fa8ec9ae1c689630e6e19bcac145b2c0 75 Pfam PF14147 Sporulation protein YhaL 4 55 2.9E-28 T 12-10-2018 IPR025428 Sporulation protein YhaL BEN31_06520 b657dc5932270af6ef05fab26757419b 497 Pfam PF00474 Sodium:solute symporter family 40 432 1.5E-23 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BEN31_06520 b657dc5932270af6ef05fab26757419b 497 Gene3D G3DSA:1.20.1730.10 27 495 7.1E-42 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 SUPERFAMILY SSF56601 192 591 5.29E-88 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 SMART SM00740 597 657 5.3E-5 T 12-10-2018 IPR005543 PASTA domain BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 SMART SM00740 658 714 0.024 T 12-10-2018 IPR005543 PASTA domain BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 223 5.9E-23 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 SUPERFAMILY SSF54184 602 655 4.32E-9 T 12-10-2018 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Pfam PF03793 PASTA domain 602 655 8.4E-5 T 12-10-2018 IPR005543 PASTA domain BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Pfam PF03793 PASTA domain 660 711 2.3E-6 T 12-10-2018 IPR005543 PASTA domain BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 575 6.8E-81 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Gene3D G3DSA:3.30.70.2110 79 162 1.8E-60 T 12-10-2018 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 SUPERFAMILY SSF54184 659 705 6.67E-10 T 12-10-2018 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Gene3D G3DSA:3.40.710.10 234 582 4.0E-96 T 12-10-2018 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 SUPERFAMILY SSF56519 56 240 3.01E-47 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Gene3D G3DSA:2.20.70.70 55 226 1.8E-60 T 12-10-2018 BEN31_08745 9128eab7d09f9e5eb4d40355c13ea57a 716 Gene3D G3DSA:3.90.1310.10 60 207 1.8E-60 T 12-10-2018 BEN31_06975 de078e1fa45ed6192c8d328e709890f0 268 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 146 156 - T 12-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 BEN31_06975 de078e1fa45ed6192c8d328e709890f0 268 SUPERFAMILY SSF52799 7 256 1.63E-45 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like BEN31_06975 de078e1fa45ed6192c8d328e709890f0 268 Pfam PF13350 Tyrosine phosphatase family 7 256 1.4E-60 T 12-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type BEN31_06975 de078e1fa45ed6192c8d328e709890f0 268 Gene3D G3DSA:3.90.190.10 8 257 3.2E-59 T 12-10-2018 IPR029021 Protein-tyrosine phosphatase-like BEN31_17940 f78f5c07fec483d0f4d4f9c314a3eda9 365 Pfam PF03845 Spore germination protein 4 316 2.5E-61 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_17940 f78f5c07fec483d0f4d4f9c314a3eda9 365 Gene3D G3DSA:1.20.1740.10 1 364 4.6E-10 T 12-10-2018 BEN31_17940 f78f5c07fec483d0f4d4f9c314a3eda9 365 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 3 359 2.8E-62 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 PIRSF PIRSF001013 9 162 9.4E-78 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 SUPERFAMILY SSF53933 55 162 5.1E-39 T 12-10-2018 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 PRINTS PR00117 Barnase signature 59 76 4.1E-57 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 PRINTS PR00117 Barnase signature 120 139 4.1E-57 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 PRINTS PR00117 Barnase signature 99 117 4.1E-57 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 PRINTS PR00117 Barnase signature 79 96 4.1E-57 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 PRINTS PR00117 Barnase signature 142 160 4.1E-57 T 12-10-2018 IPR001887 Barnase GO:0003723|GO:0004521 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 Gene3D G3DSA:3.10.450.30 47 162 1.1E-47 T 12-10-2018 BEN31_18650 8675f9f277248b8bf1bf0b5658209a37 162 Pfam PF00545 ribonuclease 72 160 8.0E-24 T 12-10-2018 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 Gene3D G3DSA:1.10.1240.30 1 84 6.0E-34 T 12-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 145 333 1.7E-52 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 9 83 2.1E-30 T 12-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 SMART SM00331 119 333 1.0E-65 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 2.0E-40 T 12-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 SUPERFAMILY SSF81606 124 332 1.7E-7 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 Gene3D G3DSA:3.60.40.10 88 335 2.5E-55 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13325 a518a6f4c2ae75d8c012329994631e31 335 SUPERFAMILY SSF101215 2 84 5.75E-30 T 12-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 BEN31_07700 c2c9f7eb252ed5031d577eadcd43bfcf 149 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 140 7.0E-68 T 12-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes BEN31_07700 c2c9f7eb252ed5031d577eadcd43bfcf 149 Gene3D G3DSA:3.30.300.20 6 145 2.2E-28 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_07700 c2c9f7eb252ed5031d577eadcd43bfcf 149 Pfam PF02566 OsmC-like protein 39 142 1.2E-15 T 12-10-2018 IPR003718 OsmC/Ohr family BEN31_07700 c2c9f7eb252ed5031d577eadcd43bfcf 149 SUPERFAMILY SSF82784 3 140 1.26E-29 T 12-10-2018 IPR036102 OsmC/Ohr superfamily BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 Pfam PF07690 Major Facilitator Superfamily 16 352 5.9E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 Gene3D G3DSA:1.20.1250.20 4 390 1.4E-71 T 12-10-2018 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 SUPERFAMILY SSF103473 1 391 2.49E-75 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 PRINTS PR01035 Tetracycline resistance protein signature 78 102 2.2E-21 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 PRINTS PR01035 Tetracycline resistance protein signature 253 273 2.2E-21 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 PRINTS PR01035 Tetracycline resistance protein signature 341 364 2.2E-21 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 PRINTS PR01035 Tetracycline resistance protein signature 21 37 2.2E-21 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 PRINTS PR01035 Tetracycline resistance protein signature 164 184 2.2E-21 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_13100 aca31bb2bceaa3c580df14ccfe7cf74b 399 PRINTS PR01035 Tetracycline resistance protein signature 136 158 2.2E-21 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 SUPERFAMILY SSF52777 3 156 1.1E-23 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 SUPERFAMILY SSF56801 397 951 3.01E-146 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 460 855 1.9E-129 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Pfam PF00550 Phosphopantetheine attachment site 944 1004 1.2E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Pfam PF00501 AMP-binding enzyme 444 831 4.0E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Gene3D G3DSA:3.30.559.30 188 411 6.3E-28 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Gene3D G3DSA:3.30.559.10 1 183 3.7E-33 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 ProSitePatterns PS00455 Putative AMP-binding domain signature. 577 588 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1319 1468 7.1E-35 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Gene3D G3DSA:3.40.50.12780 427 824 1.5E-122 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Gene3D G3DSA:3.30.300.30 825 929 3.9E-31 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Gene3D G3DSA:1.10.1200.10 930 1008 2.0E-14 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 SUPERFAMILY SSF52777 1030 1195 2.56E-23 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Gene3D G3DSA:3.30.559.30 1186 1449 4.3E-53 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Pfam PF13193 AMP-binding enzyme C-terminal domain 839 913 1.1E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 SUPERFAMILY SSF52777 1201 1444 1.56E-31 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Pfam PF00668 Condensation domain 1030 1459 1.2E-59 T 12-10-2018 IPR001242 Condensation domain BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Pfam PF00668 Condensation domain 16 415 1.2E-63 T 12-10-2018 IPR001242 Condensation domain BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 SUPERFAMILY SSF47336 938 1005 4.06E-12 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 Gene3D G3DSA:3.30.559.10 1009 1185 1.8E-33 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 SUPERFAMILY SSF52777 166 402 2.33E-33 T 12-10-2018 BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 PRINTS PR00154 AMP-binding signature 584 592 8.1E-5 T 12-10-2018 IPR020459 AMP-binding BEN31_12515 10b0ac04d84fd8b55410101badfb919a 1470 PRINTS PR00154 AMP-binding signature 572 583 8.1E-5 T 12-10-2018 IPR020459 AMP-binding BEN31_17230 75c379820a78b75ef719b8232f14ae09 284 SUPERFAMILY SSF51735 1 276 6.02E-89 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17230 75c379820a78b75ef719b8232f14ae09 284 Gene3D G3DSA:3.40.50.720 2 264 3.3E-98 T 12-10-2018 BEN31_17230 75c379820a78b75ef719b8232f14ae09 284 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 276 3.0E-99 T 12-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BEN31_17230 75c379820a78b75ef719b8232f14ae09 284 Gene3D G3DSA:3.90.25.10 159 270 3.3E-98 T 12-10-2018 BEN31_17230 75c379820a78b75ef719b8232f14ae09 284 Pfam PF04321 RmlD substrate binding domain 1 276 5.4E-100 T 12-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 BEN31_13930 1e9a08016bfc3982eea566b30d0cae9e 661 Pfam PF02538 Hydantoinase B/oxoprolinase 4 530 2.9E-143 T 12-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 290 313 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 70 95 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 7.0E-35 T 12-10-2018 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 Gene3D G3DSA:1.10.3860.10 1 413 4.5E-122 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 SUPERFAMILY SSF118215 7 396 1.24E-111 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 Pfam PF00375 Sodium:dicarboxylate symporter family 7 395 5.0E-118 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN31_12985 4ef52bf771ad7d594ec03f16e032e9df 416 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 32 47 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 20 375 50.702 T 12-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 SUPERFAMILY SSF88697 4 158 1.39E-47 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 SUPERFAMILY SSF52374 161 371 3.13E-84 T 12-10-2018 BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 Pfam PF14306 PUA-like domain 4 153 1.1E-50 T 12-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 Gene3D G3DSA:3.10.400.10 3 152 3.1E-47 T 12-10-2018 BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 Pfam PF01747 ATP-sulfurylase 161 371 7.3E-93 T 12-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 5 371 1.1E-141 T 12-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BEN31_08505 e5223bce310c3b71b37179c6086225ec 378 Gene3D G3DSA:3.40.50.620 161 373 2.0E-95 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 SUPERFAMILY SSF53328 3 206 2.09E-65 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 36.225 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 Gene3D G3DSA:3.40.50.170 1 206 7.6E-84 T 12-10-2018 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 309 2.1E-115 T 12-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 Gene3D G3DSA:3.10.25.10 207 313 8.7E-37 T 12-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 2.0E-29 T 12-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 SUPERFAMILY SSF50486 205 310 8.16E-31 T 12-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 BEN31_08435 f3a708f6d1dfefb5d944f33a6966736a 317 Pfam PF00551 Formyl transferase 3 177 5.8E-39 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_09930 03436d25689dc09e31761e900be46e57 123 Pfam PF17428 Family of unknown function (DUF5412) 3 117 1.6E-41 T 12-10-2018 IPR035406 Protein of unknown function DUF5412 BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 124 6.5E-53 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 Gene3D G3DSA:1.10.1200.120 1 125 5.0E-42 T 12-10-2018 IPR036019 Gated mechanosensitive channel BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 123 24.107 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 SUPERFAMILY SSF81330 11 118 1.03E-34 T 12-10-2018 IPR036019 Gated mechanosensitive channel BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 2.8E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.8E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 2.8E-12 T 12-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 122 6.1E-45 T 12-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L BEN31_17830 39f837d00619510496b4c44ff9b2429a 131 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 12-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Gene3D G3DSA:3.30.470.20 189 324 9.9E-59 T 12-10-2018 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 SUPERFAMILY SSF56059 102 322 7.25E-63 T 12-10-2018 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Gene3D G3DSA:3.40.50.20 1 93 7.1E-35 T 12-10-2018 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 42.791 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 SMART SM01209 101 293 4.6E-128 T 12-10-2018 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 3.7E-83 T 12-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 415 1.1E-26 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 SUPERFAMILY SSF52440 2 101 1.27E-33 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 417 5.3E-175 T 12-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 SMART SM01210 325 417 2.0E-43 T 12-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 12-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 SUPERFAMILY SSF51246 324 417 3.14E-28 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 2.3E-32 T 12-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Gene3D G3DSA:3.30.1490.20 119 188 9.1E-28 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_12610 bdb85afe9be7c184ae112ed6e12b8bae 424 Gene3D G3DSA:3.90.600.10 325 422 6.5E-34 T 12-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_11140 474532d104c240e8071a9d5775f34944 146 Pfam PF13411 MerR HTH family regulatory protein 15 82 1.1E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_11140 474532d104c240e8071a9d5775f34944 146 SUPERFAMILY SSF46955 15 119 1.65E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_11140 474532d104c240e8071a9d5775f34944 146 Gene3D G3DSA:1.10.1660.10 3 132 1.6E-23 T 12-10-2018 BEN31_11140 474532d104c240e8071a9d5775f34944 146 SMART SM00422 15 83 2.8E-24 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_13020 0b743d2c8e213366587cb0966f0c5cf5 329 SUPERFAMILY SSF51430 1 317 4.58E-96 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_13020 0b743d2c8e213366587cb0966f0c5cf5 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 260 272 4.6E-7 T 12-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN31_13020 0b743d2c8e213366587cb0966f0c5cf5 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 273 286 4.6E-7 T 12-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN31_13020 0b743d2c8e213366587cb0966f0c5cf5 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 109 119 4.6E-7 T 12-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN31_13020 0b743d2c8e213366587cb0966f0c5cf5 329 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 203 209 4.6E-7 T 12-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 BEN31_13020 0b743d2c8e213366587cb0966f0c5cf5 329 Gene3D G3DSA:3.20.20.100 1 327 4.3E-113 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_13020 0b743d2c8e213366587cb0966f0c5cf5 329 Pfam PF00248 Aldo/keto reductase family 16 316 4.0E-79 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 243 1.0E-11 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 205 214 1.0E-11 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 318 331 1.0E-11 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 Gene3D G3DSA:3.40.50.880 164 342 5.8E-35 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 Pfam PF00117 Glutamine amidotransferase class-I 166 341 3.8E-45 T 12-10-2018 IPR017926 Glutamine amidotransferase BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 344 6.3E-136 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 347 43.352 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 9.1E-49 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 Gene3D G3DSA:3.50.30.20 1 146 1.3E-51 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 SUPERFAMILY SSF52021 1 139 2.88E-49 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 SUPERFAMILY SSF52317 142 345 1.41E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 248 1.0E-31 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 274 285 1.0E-31 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 164 178 1.0E-31 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 249 266 1.0E-31 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 202 216 1.0E-31 T 12-10-2018 BEN31_10430 4795b4c3e466ff6299afe4939578a442 353 SMART SM01097 1 130 1.3E-72 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 454 2.3E-137 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 Pfam PF08245 Mur ligase middle domain 111 294 6.1E-51 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 454 33.58 T 12-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 Pfam PF01225 Mur ligase family, catalytic domain 26 100 1.2E-13 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 SUPERFAMILY SSF53623 106 311 2.09E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 SUPERFAMILY SSF63418 1 101 4.45E-24 T 12-10-2018 IPR035911 MurE/MurF, N-terminal BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 392 2.4E-14 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 SUPERFAMILY SSF53244 316 454 2.01E-36 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 Gene3D G3DSA:3.90.190.20 314 454 9.3E-43 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 Gene3D G3DSA:3.40.1390.10 1 86 1.9E-20 T 12-10-2018 BEN31_13400 2b4329f2373df53486be25e55a2d4065 454 Gene3D G3DSA:3.40.1190.10 87 311 2.0E-69 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_01080 75c1204a70ea4353ac0fa1e84a92979b 671 Pfam PF00999 Sodium/hydrogen exchanger family 7 412 6.8E-66 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BEN31_01080 75c1204a70ea4353ac0fa1e84a92979b 671 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 10 519 1.7E-102 T 12-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 BEN31_09015 dbf8526ab19cc35de307cbe91ce9211f 371 Gene3D G3DSA:3.40.50.970 5 371 2.5E-123 T 12-10-2018 BEN31_09015 dbf8526ab19cc35de307cbe91ce9211f 371 Pfam PF00676 Dehydrogenase E1 component 53 343 3.1E-100 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BEN31_09015 dbf8526ab19cc35de307cbe91ce9211f 371 SUPERFAMILY SSF52518 11 365 2.21E-101 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_09015 dbf8526ab19cc35de307cbe91ce9211f 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 363 3.0E-142 T 12-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 BEN31_06065 83d299a747049cd52ca0fa3e243f887a 279 Gene3D G3DSA:3.20.20.60 2 272 1.4E-113 T 12-10-2018 BEN31_06065 83d299a747049cd52ca0fa3e243f887a 279 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 9.3E-123 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN31_06065 83d299a747049cd52ca0fa3e243f887a 279 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 42.847 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN31_06065 83d299a747049cd52ca0fa3e243f887a 279 PIRSF PIRSF000388 1 266 6.9E-110 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN31_06065 83d299a747049cd52ca0fa3e243f887a 279 Pfam PF02548 Ketopantoate hydroxymethyltransferase 6 258 5.3E-112 T 12-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 BEN31_06065 83d299a747049cd52ca0fa3e243f887a 279 SUPERFAMILY SSF51621 3 263 7.07E-107 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN31_06380 c5394dab6625927a8d3b544824006a0f 196 Gene3D G3DSA:3.40.30.10 25 194 2.3E-58 T 12-10-2018 BEN31_06380 c5394dab6625927a8d3b544824006a0f 196 SUPERFAMILY SSF52833 33 193 6.42E-42 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_06380 c5394dab6625927a8d3b544824006a0f 196 Pfam PF02630 SCO1/SenC 13 176 1.0E-52 T 12-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 SUPERFAMILY SSF55424 322 440 1.72E-31 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 291 1.0E-65 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 Gene3D G3DSA:3.50.50.60 114 439 2.9E-163 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 SUPERFAMILY SSF51905 1 125 2.51E-20 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 Gene3D G3DSA:3.50.50.60 2 339 2.9E-163 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 SUPERFAMILY SSF51905 108 315 3.84E-44 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.5E-27 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.5E-27 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.5E-27 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 1.5E-27 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.5E-27 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 328 431 7.9E-16 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.6E-17 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 2.6E-17 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 2.6E-17 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 386 401 2.6E-17 T 12-10-2018 BEN31_05415 1ed79da2d3524bee526ab9c220bbde53 442 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 2.6E-17 T 12-10-2018 BEN31_01335 8b6dcb714d2bc8777b82e9d04773ef41 78 ProDom PD058325 YUSG BH3483 7 78 1.0E-18 T 12-10-2018 IPR020140 Uncharacterised protein family YusG BEN31_01335 8b6dcb714d2bc8777b82e9d04773ef41 78 Pfam PF10830 Protein of unknown function (DUF2553) 6 78 1.8E-31 T 12-10-2018 IPR020140 Uncharacterised protein family YusG BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 Pfam PF00186 Dihydrofolate reductase 1 159 2.7E-66 T 12-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 SUPERFAMILY SSF53597 1 160 9.4E-61 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 PIRSF PIRSF000194 1 161 1.6E-65 T 12-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 PRINTS PR00070 Dihydrofolate reductase signature 27 35 2.0E-16 T 12-10-2018 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 PRINTS PR00070 Dihydrofolate reductase signature 91 105 2.0E-16 T 12-10-2018 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 PRINTS PR00070 Dihydrofolate reductase signature 13 23 2.0E-16 T 12-10-2018 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 PRINTS PR00070 Dihydrofolate reductase signature 40 51 2.0E-16 T 12-10-2018 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 12-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 BEN31_06345 6b0b376ab2531d92c58b2c73d35d17bf 161 Gene3D G3DSA:3.40.430.10 1 161 3.9E-64 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_16915 ef15577b180fbb15727248c79da79987 498 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16915 ef15577b180fbb15727248c79da79987 498 Gene3D G3DSA:3.40.50.300 1 241 2.7E-51 T 12-10-2018 BEN31_16915 ef15577b180fbb15727248c79da79987 498 Pfam PF00005 ABC transporter 271 426 3.8E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16915 ef15577b180fbb15727248c79da79987 498 SUPERFAMILY SSF52540 254 479 1.51E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16915 ef15577b180fbb15727248c79da79987 498 SMART SM00382 280 475 3.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16915 ef15577b180fbb15727248c79da79987 498 SMART SM00382 30 253 2.2E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16915 ef15577b180fbb15727248c79da79987 498 Gene3D G3DSA:3.40.50.300 260 494 4.4E-46 T 12-10-2018 BEN31_16915 ef15577b180fbb15727248c79da79987 498 SUPERFAMILY SSF52540 4 223 9.16E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16915 ef15577b180fbb15727248c79da79987 498 Pfam PF00005 ABC transporter 21 171 4.2E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09220 59923e822d52f8d18b7411d1fdefae4e 158 TIGRFAM TIGR01753 flav_short: flavodoxin 4 142 4.4E-44 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 BEN31_09220 59923e822d52f8d18b7411d1fdefae4e 158 SUPERFAMILY SSF52218 1 146 2.62E-39 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_09220 59923e822d52f8d18b7411d1fdefae4e 158 Pfam PF00258 Flavodoxin 5 134 4.6E-28 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BEN31_09220 59923e822d52f8d18b7411d1fdefae4e 158 Gene3D G3DSA:3.40.50.360 1 144 2.9E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_09220 59923e822d52f8d18b7411d1fdefae4e 158 PRINTS PR00369 Flavodoxin signature 52 63 6.2E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_09220 59923e822d52f8d18b7411d1fdefae4e 158 PRINTS PR00369 Flavodoxin signature 4 17 6.2E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_09220 59923e822d52f8d18b7411d1fdefae4e 158 PRINTS PR00369 Flavodoxin signature 81 91 6.2E-5 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 Gene3D G3DSA:3.40.50.300 288 514 6.4E-45 T 12-10-2018 BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 Pfam PF00005 ABC transporter 19 190 1.3E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 SMART SM00382 27 237 1.5E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 SMART SM00382 348 517 5.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 SUPERFAMILY SSF52540 306 505 2.08E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 Gene3D G3DSA:3.40.50.300 3 284 1.7E-65 T 12-10-2018 BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 Pfam PF00005 ABC transporter 341 468 2.1E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 SUPERFAMILY SSF52540 3 244 3.67E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 Pfam PF12848 ABC transporter 229 314 3.2E-20 T 12-10-2018 IPR032781 ABC-transporter extension domain BEN31_12230 44197ae09eb348d4b1c859b0850e3579 517 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_10405 20436796426c78ecd358439ca307b33f 64 Pfam PF11151 Protein of unknown function (DUF2929) 1 55 1.7E-20 T 12-10-2018 IPR021324 Protein of unknown function DUF2929 BEN31_10785 d81c9836e625439a76374c3f826938d7 368 Gene3D G3DSA:2.40.37.20 6 362 2.5E-106 T 12-10-2018 BEN31_10785 d81c9836e625439a76374c3f826938d7 368 SUPERFAMILY SSF51419 13 244 5.38E-39 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_10785 d81c9836e625439a76374c3f826938d7 368 Gene3D G3DSA:3.20.20.10 15 238 2.5E-106 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_10785 d81c9836e625439a76374c3f826938d7 368 Pfam PF01168 Alanine racemase, N-terminal domain 13 240 1.9E-29 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_10785 d81c9836e625439a76374c3f826938d7 368 SMART SM01119 254 351 1.7E-32 T 12-10-2018 IPR026956 D-serine dehydratase-like domain BEN31_10785 d81c9836e625439a76374c3f826938d7 368 Pfam PF14031 Putative serine dehydratase domain 254 349 1.0E-19 T 12-10-2018 IPR026956 D-serine dehydratase-like domain BEN31_08800 efa63f0a2bdd86d6111925d29a2d5870 342 Gene3D G3DSA:3.30.230.10 209 342 5.8E-17 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_08800 efa63f0a2bdd86d6111925d29a2d5870 342 SUPERFAMILY SSF50156 129 212 3.55E-15 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_08800 efa63f0a2bdd86d6111925d29a2d5870 342 SMART SM00228 112 187 0.0042 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_08800 efa63f0a2bdd86d6111925d29a2d5870 342 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 232 332 6.8E-11 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BEN31_08800 efa63f0a2bdd86d6111925d29a2d5870 342 SUPERFAMILY SSF54211 229 334 9.48E-21 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_08800 efa63f0a2bdd86d6111925d29a2d5870 342 Pfam PF13180 PDZ domain 129 196 5.0E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_08800 efa63f0a2bdd86d6111925d29a2d5870 342 Gene3D G3DSA:2.30.42.10 129 207 1.1E-22 T 12-10-2018 BEN31_17340 25350cc7d7bbb5f7ccf7cdbeb994ac57 73 Hamap MF_01863 UPF0741 protein . 1 73 29.391 T 12-10-2018 IPR020880 Protein of unknown function UPF0741 BEN31_17340 25350cc7d7bbb5f7ccf7cdbeb994ac57 73 Pfam PF07293 Protein of unknown function (DUF1450) 8 73 2.3E-8 T 12-10-2018 IPR009910 Protein of unknown function DUF1450 BEN31_10840 a9c143b4c5ae3f761a0d6be9a4697744 329 SUPERFAMILY SSF82649 243 329 1.36E-29 T 12-10-2018 BEN31_10840 a9c143b4c5ae3f761a0d6be9a4697744 329 Gene3D G3DSA:3.30.930.10 3 242 3.5E-82 T 12-10-2018 BEN31_10840 a9c143b4c5ae3f761a0d6be9a4697744 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 328 3.4E-33 T 12-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 BEN31_10840 a9c143b4c5ae3f761a0d6be9a4697744 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 323 2.2E-137 T 12-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 BEN31_10840 a9c143b4c5ae3f761a0d6be9a4697744 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 151 5.6E-12 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN31_10840 a9c143b4c5ae3f761a0d6be9a4697744 329 Gene3D G3DSA:3.30.390.50 243 329 2.5E-33 T 12-10-2018 BEN31_10840 a9c143b4c5ae3f761a0d6be9a4697744 329 SUPERFAMILY SSF55681 2 241 1.35E-81 T 12-10-2018 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 Pfam PF00512 His Kinase A (phospho-acceptor) domain 357 420 5.4E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 579 1.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 SMART SM00388 356 424 1.6E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 Gene3D G3DSA:1.10.287.130 348 428 2.3E-11 T 12-10-2018 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 SUPERFAMILY SSF47384 342 424 1.67E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 Gene3D G3DSA:3.30.565.10 429 582 1.4E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 SMART SM00387 470 581 8.9E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 9.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 9.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 535 9.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 9.6E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01155 492369e62dd8fdad7ad0b7382fd936a0 584 SUPERFAMILY SSF55874 414 578 6.81E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13150 ba97b5d341a0239d4c33bf615ce947c8 297 Pfam PF07859 alpha/beta hydrolase fold 68 273 2.8E-66 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BEN31_13150 ba97b5d341a0239d4c33bf615ce947c8 297 Gene3D G3DSA:3.40.50.1820 4 296 5.8E-81 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13150 ba97b5d341a0239d4c33bf615ce947c8 297 SUPERFAMILY SSF53474 30 295 9.95E-64 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_08805 9862c50554d7100228acf7474cb70643 259 Pfam PF01734 Patatin-like phospholipase 8 70 5.6E-13 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BEN31_08805 9862c50554d7100228acf7474cb70643 259 Pfam PF01734 Patatin-like phospholipase 124 164 2.3E-9 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BEN31_08805 9862c50554d7100228acf7474cb70643 259 Gene3D G3DSA:3.40.1090.10 1 100 2.9E-25 T 12-10-2018 BEN31_08805 9862c50554d7100228acf7474cb70643 259 SUPERFAMILY SSF52151 1 242 1.99E-54 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_08805 9862c50554d7100228acf7474cb70643 259 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 12-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 BEN31_08805 9862c50554d7100228acf7474cb70643 259 Gene3D G3DSA:3.40.1090.20 101 208 4.2E-5 T 12-10-2018 BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 SUPERFAMILY SSF52540 3 223 1.21E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 Pfam PF00005 ABC transporter 268 421 8.3E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 Pfam PF00005 ABC transporter 18 168 2.9E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 Gene3D G3DSA:3.40.50.300 1 240 9.5E-62 T 12-10-2018 BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 SMART SM00382 27 224 4.6E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 SMART SM00382 276 470 2.1E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 Gene3D G3DSA:3.40.50.300 250 489 3.3E-42 T 12-10-2018 BEN31_17915 3d5c853ca747cc19ea0556d3be752ebb 493 SUPERFAMILY SSF52540 266 479 6.32E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15405 aa4e6915e32e24d528b3ccf2f7a1cf1f 102 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 19 102 4.1E-35 T 12-10-2018 IPR012504 Sporulation protein YabP BEN31_15405 aa4e6915e32e24d528b3ccf2f7a1cf1f 102 PIRSF PIRSF011576 1 102 1.7E-53 T 12-10-2018 IPR012504 Sporulation protein YabP BEN31_15405 aa4e6915e32e24d528b3ccf2f7a1cf1f 102 Pfam PF07873 YabP family 19 84 3.1E-21 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC BEN31_15405 aa4e6915e32e24d528b3ccf2f7a1cf1f 102 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 18 102 3.0E-38 T 12-10-2018 IPR012504 Sporulation protein YabP BEN31_15405 aa4e6915e32e24d528b3ccf2f7a1cf1f 102 Gene3D G3DSA:2.60.40.2000 27 84 6.9E-24 T 12-10-2018 IPR038705 YabP superfamily BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 SUPERFAMILY SSF53067 120 349 3.94E-55 T 12-10-2018 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 Hamap MF_00542 Probable butyrate kinase [buk]. 1 373 174.577 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 356 5.1E-176 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 Pfam PF00871 Acetokinase family 8 336 2.7E-70 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 SUPERFAMILY SSF53067 6 175 1.85E-73 T 12-10-2018 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 PIRSF PIRSF036458 4 359 1.2E-174 T 12-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 Gene3D G3DSA:3.30.420.40 140 335 4.9E-160 T 12-10-2018 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 PRINTS PR00471 Acetate kinase family signature 8 19 4.5E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 PRINTS PR00471 Acetate kinase family signature 300 316 4.5E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 PRINTS PR00471 Acetate kinase family signature 277 290 4.5E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 PRINTS PR00471 Acetate kinase family signature 182 203 4.5E-15 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 Gene3D G3DSA:3.30.420.40 7 358 4.9E-160 T 12-10-2018 BEN31_05225 ddf0fcf7662aa69de3069696efe64184 373 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 182 199 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 Gene3D G3DSA:1.10.10.10 1 91 3.9E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 Pfam PF03466 LysR substrate binding domain 88 289 7.0E-37 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.0E-20 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 SUPERFAMILY SSF46785 1 84 4.19E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 Gene3D G3DSA:3.40.190.290 92 295 1.2E-36 T 12-10-2018 BEN31_09990 72e7418cdcea2b1c6de2e28f8a9e282b 296 SUPERFAMILY SSF53850 88 293 1.39E-38 T 12-10-2018 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 Gene3D G3DSA:2.130.10.10 335 574 7.4E-26 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 101 115 - T 12-10-2018 IPR019775 WD40 repeat, conserved site BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 Gene3D G3DSA:2.130.10.10 169 325 1.4E-22 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 Pfam PF00400 WD domain, G-beta repeat 42 72 0.0046 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 Pfam PF00400 WD domain, G-beta repeat 203 238 4.2E-6 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 Pfam PF00400 WD domain, G-beta repeat 79 114 1.0E-4 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 Pfam PF00400 WD domain, G-beta repeat 120 153 0.0093 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 Gene3D G3DSA:2.130.10.10 1 168 3.0E-38 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 485 523 2.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 443 482 3.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 241 281 320.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 2 31 130.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 157 196 210.0 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 32 72 1.3E-4 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 403 440 7.9 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 75 114 3.0E-7 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 361 400 2.6 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 117 154 0.47 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SMART SM00320 199 238 8.7E-8 T 12-10-2018 IPR001680 WD40 repeat GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SUPERFAMILY SSF50978 2 316 2.62E-59 T 12-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 BEN31_12190 57e25f7fb777662488c4975544ec42b2 585 SUPERFAMILY SSF50998 258 525 1.65E-29 T 12-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily BEN31_12760 d2fd10653eb78dbd4f3a72ba76ecf2dd 295 SMART SM00342 24 107 5.0E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_12760 d2fd10653eb78dbd4f3a72ba76ecf2dd 295 SUPERFAMILY SSF46689 8 58 7.17E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_12760 d2fd10653eb78dbd4f3a72ba76ecf2dd 295 Gene3D G3DSA:1.10.10.60 61 114 2.2E-16 T 12-10-2018 BEN31_12760 d2fd10653eb78dbd4f3a72ba76ecf2dd 295 Gene3D G3DSA:1.10.10.60 2 60 3.4E-20 T 12-10-2018 BEN31_12760 d2fd10653eb78dbd4f3a72ba76ecf2dd 295 Pfam PF12833 Helix-turn-helix domain 30 108 3.0E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_12760 d2fd10653eb78dbd4f3a72ba76ecf2dd 295 SUPERFAMILY SSF46689 60 109 9.41E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_12760 d2fd10653eb78dbd4f3a72ba76ecf2dd 295 Gene3D G3DSA:2.60.120.260 115 280 2.5E-19 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00385 P450 superfamily signature 346 357 2.6E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00385 P450 superfamily signature 271 282 2.6E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00385 P450 superfamily signature 236 253 2.6E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00385 P450 superfamily signature 337 346 2.6E-6 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 Pfam PF00067 Cytochrome P450 49 395 3.1E-38 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 Gene3D G3DSA:1.10.630.10 2 397 1.4E-132 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 SUPERFAMILY SSF48264 24 397 4.58E-97 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 339 348 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 190 212 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 337 346 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 127 143 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 271 282 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 316 331 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 288 315 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 346 357 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 144 159 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_06780 338d19a376aa028b5d09ce08f7e81e17 398 PRINTS PR00359 B-class P450 signature 81 92 1.1E-54 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_12750 5fd0a4e97815c64ee101e884073885c6 191 Pfam PF13302 Acetyltransferase (GNAT) domain 18 157 5.9E-25 T 12-10-2018 IPR000182 GNAT domain BEN31_12750 5fd0a4e97815c64ee101e884073885c6 191 Gene3D G3DSA:3.40.630.30 9 191 4.1E-38 T 12-10-2018 BEN31_12750 5fd0a4e97815c64ee101e884073885c6 191 SUPERFAMILY SSF55729 9 184 1.03E-37 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_06820 2084cfc748b95095a9bda951130d615b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_06820 2084cfc748b95095a9bda951130d615b 300 Gene3D G3DSA:1.10.10.10 1 84 3.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06820 2084cfc748b95095a9bda951130d615b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_06820 2084cfc748b95095a9bda951130d615b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_06820 2084cfc748b95095a9bda951130d615b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_06820 2084cfc748b95095a9bda951130d615b 300 SUPERFAMILY SSF46785 1 84 1.52E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06820 2084cfc748b95095a9bda951130d615b 300 SUPERFAMILY SSF53850 88 295 2.65E-39 T 12-10-2018 BEN31_06820 2084cfc748b95095a9bda951130d615b 300 Pfam PF03466 LysR substrate binding domain 89 291 4.7E-44 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_06820 2084cfc748b95095a9bda951130d615b 300 Gene3D G3DSA:3.40.190.290 90 298 1.0E-51 T 12-10-2018 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 Gene3D G3DSA:3.40.50.300 94 371 7.3E-128 T 12-10-2018 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 Gene3D G3DSA:2.40.30.20 1 93 5.2E-38 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 Gene3D G3DSA:1.20.150.20 372 499 1.8E-50 T 12-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 SUPERFAMILY SSF52540 95 370 3.14E-98 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 SUPERFAMILY SSF47917 372 499 5.23E-46 T 12-10-2018 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 1.3E-261 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 SUPERFAMILY SSF50615 10 94 2.94E-31 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 51.264 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 1.2E-19 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 1.5E-73 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 PIRSF PIRSF039088 1 501 1.1E-251 T 12-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17625 d11181a3406e18de6cbe447ccb401a6d 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 485 2.5E-46 T 12-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 SUPERFAMILY SSF51246 310 371 5.02E-12 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 Gene3D G3DSA:3.40.50.20 2 115 6.4E-43 T 12-10-2018 BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 SUPERFAMILY SSF56059 107 305 3.89E-63 T 12-10-2018 BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 Pfam PF02222 ATP-grasp domain 117 285 7.0E-61 T 12-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 363 1.4E-134 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 Gene3D G3DSA:3.30.470.20 186 373 5.2E-73 T 12-10-2018 BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 SUPERFAMILY SSF52440 7 92 9.64E-25 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 Gene3D G3DSA:3.30.1490.20 117 185 7.8E-25 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_12660 5f7887544ce8a475065a8e3697e42d7a 380 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 360 42.315 T 12-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 BEN31_04835 de177d61a823cf2d53cbe37c360cf7d3 270 Gene3D G3DSA:3.40.50.300 21 268 1.3E-62 T 12-10-2018 BEN31_04835 de177d61a823cf2d53cbe37c360cf7d3 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_04835 de177d61a823cf2d53cbe37c360cf7d3 270 SMART SM00382 48 242 4.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_04835 de177d61a823cf2d53cbe37c360cf7d3 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 24 270 4.1E-121 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BEN31_04835 de177d61a823cf2d53cbe37c360cf7d3 270 Pfam PF00005 ABC transporter 40 194 1.7E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_04835 de177d61a823cf2d53cbe37c360cf7d3 270 SUPERFAMILY SSF52540 15 257 4.19E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 392 50.946 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 12-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 Gene3D G3DSA:3.40.50.1100 12 208 2.2E-180 T 12-10-2018 BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 390 1.7E-186 T 12-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 Gene3D G3DSA:3.40.50.1100 56 385 2.2E-180 T 12-10-2018 BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 SUPERFAMILY SSF53686 5 390 9.3E-140 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 PIRSF PIRSF001413 2 398 2.0E-163 T 12-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_05960 8f856755ccd58b7f949f40d16039b4d1 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 55 379 2.6E-47 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN31_13470 a1fb6370f4ea27c8bdcdf309b672d4cd 86 Pfam PF04226 Transglycosylase associated protein 34 79 6.4E-8 T 12-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 BEN31_07630 8a9e183cef697318114e166e85cdac62 252 Gene3D G3DSA:3.30.70.1070 183 252 1.3E-26 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN31_07630 8a9e183cef697318114e166e85cdac62 252 SMART SM00646 64 172 7.3E-44 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_07630 8a9e183cef697318114e166e85cdac62 252 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 5.2E-44 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_07630 8a9e183cef697318114e166e85cdac62 252 Gene3D G3DSA:3.40.630.40 1 174 1.5E-53 T 12-10-2018 BEN31_07630 8a9e183cef697318114e166e85cdac62 252 Pfam PF05036 Sporulation related domain 182 251 6.3E-18 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 BEN31_07630 8a9e183cef697318114e166e85cdac62 252 SUPERFAMILY SSF110997 181 251 7.45E-18 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN31_07630 8a9e183cef697318114e166e85cdac62 252 SUPERFAMILY SSF53187 1 178 3.77E-51 T 12-10-2018 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 Gene3D G3DSA:3.30.160.20 209 295 6.7E-96 T 12-10-2018 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 Gene3D G3DSA:3.30.70.1660 110 340 6.7E-96 T 12-10-2018 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 SMART SM00937 63 177 3.6E-63 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 353 3.8E-173 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 SUPERFAMILY SSF75620 8 351 1.7E-135 T 12-10-2018 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 Pfam PF00472 RF-1 domain 210 319 7.4E-41 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 Pfam PF03462 PCRF domain 8 202 2.7E-74 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 Gene3D G3DSA:1.20.58.410 1 101 9.2E-9 T 12-10-2018 BEN31_17540 6e18188790468bdb8cbd4f49e95df2d2 355 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.861 T 12-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 BEN31_17995 1ec813c831041a58f2b56540fcd47272 366 Pfam PF03845 Spore germination protein 6 330 2.5E-80 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_17995 1ec813c831041a58f2b56540fcd47272 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 362 1.2E-66 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 5 124 1.3E-16 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 SMART SM00922 141 238 3.9E-30 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 Pfam PF13378 Enolase C-terminal domain-like 143 353 1.2E-54 T 12-10-2018 IPR029065 Enolase C-terminal domain-like BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 188 219 - T 12-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 SUPERFAMILY SSF51604 112 353 7.86E-72 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 Gene3D G3DSA:3.20.20.120 116 351 6.2E-119 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 SUPERFAMILY SSF54826 1 125 6.08E-32 T 12-10-2018 BEN31_09765 aecfb9d3e672af4688b8ac04ea345e7f 359 Gene3D G3DSA:3.30.390.10 6 115 6.2E-119 T 12-10-2018 IPR029017 Enolase-like, N-terminal BEN31_15875 67b706d6058ff0035996baded6c9eb11 321 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 16 301 9.1E-101 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 BEN31_15875 67b706d6058ff0035996baded6c9eb11 321 Gene3D G3DSA:3.40.50.300 1 290 1.7E-77 T 12-10-2018 BEN31_15875 67b706d6058ff0035996baded6c9eb11 321 SMART SM00382 27 214 3.3E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15875 67b706d6058ff0035996baded6c9eb11 321 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_15875 67b706d6058ff0035996baded6c9eb11 321 Pfam PF00005 ABC transporter 19 164 4.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_15875 67b706d6058ff0035996baded6c9eb11 321 SUPERFAMILY SSF52540 1 240 1.37E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16430 e645673fd682740aff49902e162b38cf 285 SUPERFAMILY SSF53697 99 284 6.49E-49 T 12-10-2018 BEN31_16430 e645673fd682740aff49902e162b38cf 285 Gene3D G3DSA:3.40.50.10490 99 284 6.5E-55 T 12-10-2018 BEN31_16430 e645673fd682740aff49902e162b38cf 285 Pfam PF01380 SIS domain 131 259 2.7E-25 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_16430 e645673fd682740aff49902e162b38cf 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 81 1.5E-19 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BEN31_16430 e645673fd682740aff49902e162b38cf 285 SUPERFAMILY SSF46689 7 81 8.06E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_16430 e645673fd682740aff49902e162b38cf 285 Gene3D G3DSA:1.10.10.10 3 84 7.5E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 Pfam PF13244 Domain of unknown function (DUF4040) 635 700 1.6E-21 T 12-10-2018 IPR025383 Domain of unknown function DUF4040 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 792 0.0 T 12-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 Pfam PF00361 Proton-conducting membrane transporter 129 423 5.8E-69 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 116 9.3E-12 T 12-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 259 281 8.7E-7 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 8.7E-7 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 365 387 8.7E-7 T 12-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 1.4E-46 T 12-10-2018 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 1.4E-46 T 12-10-2018 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.4E-46 T 12-10-2018 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 1.4E-46 T 12-10-2018 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 1.4E-46 T 12-10-2018 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.4E-46 T 12-10-2018 BEN31_01815 f49837d8cde6b3a5e0e8eeb4d82e2a1d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 1.4E-46 T 12-10-2018 BEN31_09545 7b02a73deb8441d40086942b39f5a230 299 Gene3D G3DSA:3.30.2010.10 81 173 2.1E-30 T 12-10-2018 BEN31_09545 7b02a73deb8441d40086942b39f5a230 299 Pfam PF01435 Peptidase family M48 90 298 4.8E-37 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN31_09545 7b02a73deb8441d40086942b39f5a230 299 Hamap MF_00188 Protease HtpX [htpX]. 2 299 23.969 T 12-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 BEN31_13945 e87b605382b21fa518c5a7f13684b464 142 Pfam PF14040 Deoxyribonuclease NucA/NucB 46 129 4.3E-12 T 12-10-2018 IPR029476 Deoxyribonuclease NucA/NucB BEN31_11200 eed3cea31e055d22f9bc86add3ff272d 127 Pfam PF13028 Protein of unknown function (DUF3889) 42 126 2.0E-29 T 12-10-2018 IPR024987 Protein of unknown function DUF3889 BEN31_11200 eed3cea31e055d22f9bc86add3ff272d 127 Gene3D G3DSA:3.10.450.390 44 126 1.6E-10 T 12-10-2018 BEN31_18110 fba95c66ec95a6e8f7b2f1f265f19b69 533 SUPERFAMILY SSF52540 34 235 4.63E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18110 fba95c66ec95a6e8f7b2f1f265f19b69 533 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_18110 fba95c66ec95a6e8f7b2f1f265f19b69 533 SMART SM00382 49 229 1.8E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_18110 fba95c66ec95a6e8f7b2f1f265f19b69 533 Pfam PF00005 ABC transporter 41 171 4.4E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_18110 fba95c66ec95a6e8f7b2f1f265f19b69 533 Gene3D G3DSA:3.40.50.300 2 282 7.1E-45 T 12-10-2018 BEN31_14995 b79a30ca377c00a9fe7434fdcb369055 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.6E-54 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BEN31_14995 b79a30ca377c00a9fe7434fdcb369055 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 12-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14995 b79a30ca377c00a9fe7434fdcb369055 122 SMART SM01374 1 122 5.1E-85 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BEN31_14995 b79a30ca377c00a9fe7434fdcb369055 122 SUPERFAMILY SSF50193 1 122 5.76E-50 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_14995 b79a30ca377c00a9fe7434fdcb369055 122 Gene3D G3DSA:2.40.150.20 1 122 4.9E-53 T 12-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_14995 b79a30ca377c00a9fe7434fdcb369055 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.298 T 12-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 BEN31_14995 b79a30ca377c00a9fe7434fdcb369055 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.4E-58 T 12-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 BEN31_08690 3f75a43829c8ee3d4b61baf59d26c830 122 PIRSF PIRSF018579 1 113 2.3E-45 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 BEN31_08690 3f75a43829c8ee3d4b61baf59d26c830 122 Pfam PF06947 Protein of unknown function (DUF1290) 22 107 8.1E-34 T 12-10-2018 IPR009709 Protein of unknown function DUF1290 BEN31_04095 de4a2aa9cf402ea0bc613a22a0aaeaa9 138 SUPERFAMILY SSF53098 1 137 5.01E-44 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_04095 de4a2aa9cf402ea0bc613a22a0aaeaa9 138 Pfam PF03652 Holliday junction resolvase 1 136 1.8E-43 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BEN31_04095 de4a2aa9cf402ea0bc613a22a0aaeaa9 138 Gene3D G3DSA:3.30.420.140 1 138 2.3E-50 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BEN31_04095 de4a2aa9cf402ea0bc613a22a0aaeaa9 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 27.203 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BEN31_04095 de4a2aa9cf402ea0bc613a22a0aaeaa9 138 SMART SM00732 1 103 3.2E-37 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BEN31_04095 de4a2aa9cf402ea0bc613a22a0aaeaa9 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 4.2E-56 T 12-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 BEN31_16645 bbea32731478e55bbc2931e8c7d86f4b 175 ProDom PD033957 LIPOPROTEIN MEMBRANE TRANSMEMBRANE YFJD PALMITATE YFJE PRECURSOR SIGNAL 38 173 4.0E-27 T 12-10-2018 IPR035324 Protein of unknown function DUF5381 BEN31_16645 bbea32731478e55bbc2931e8c7d86f4b 175 Pfam PF17353 Family of unknown function (DUF5381) 5 172 1.7E-69 T 12-10-2018 IPR035324 Protein of unknown function DUF5381 BEN31_17365 4a6a2dfe35d411326392986f0f11a46c 220 Pfam PF02163 Peptidase family M50 127 186 4.3E-8 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BEN31_11790 410f43649895201d9e31c8b55e8a2350 856 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 14 293 5.5E-12 T 12-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD BEN31_11790 410f43649895201d9e31c8b55e8a2350 856 SUPERFAMILY SSF55729 647 828 2.02E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_11790 410f43649895201d9e31c8b55e8a2350 856 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 538 829 5.6E-96 T 12-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 SUPERFAMILY SSF49464 577 640 5.3E-7 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 449 459 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Pfam PF05922 Peptidase inhibitor I9 68 178 1.6E-7 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 PRINTS PR00723 Subtilisin serine protease family (S8) signature 269 282 1.9E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 PRINTS PR00723 Subtilisin serine protease family (S8) signature 217 236 1.9E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 PRINTS PR00723 Subtilisin serine protease family (S8) signature 448 464 1.9E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Pfam PF13620 Carboxypeptidase regulatory-like domain 645 712 2.4E-9 T 12-10-2018 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 SUPERFAMILY SSF52743 198 516 5.5E-70 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Pfam PF13715 CarboxypepD_reg-like domain 572 640 2.1E-8 T 12-10-2018 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Pfam PF00082 Subtilase family 217 503 5.7E-52 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Gene3D G3DSA:2.60.40.1120 570 639 2.0E-9 T 12-10-2018 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Gene3D G3DSA:3.40.50.200 185 518 4.2E-79 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 273 283 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 SUPERFAMILY SSF49464 645 740 4.32E-13 T 12-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Gene3D G3DSA:2.60.40.1120 646 726 1.6E-11 T 12-10-2018 BEN31_08675 c89f09ef8d7a1f0581d91796f13751d2 1168 Gene3D G3DSA:2.60.40.10 977 1058 2.7E-17 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 190 412 2.7E-79 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 Gene3D G3DSA:2.40.50.100 1 103 5.5E-27 T 12-10-2018 BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 SUPERFAMILY SSF51230 3 96 4.47E-27 T 12-10-2018 IPR011053 Single hybrid motif BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 Pfam PF00364 Biotin-requiring enzyme 4 76 2.3E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 SUPERFAMILY SSF52777 191 410 1.25E-81 T 12-10-2018 BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 SUPERFAMILY SSF47005 107 152 2.88E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 Gene3D G3DSA:3.30.559.10 173 418 5.9E-96 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 Pfam PF02817 e3 binding domain 114 147 8.6E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN31_05245 4e9bbdae07c98d1296f5b3b3723f39e8 418 Gene3D G3DSA:4.10.320.10 104 152 1.1E-15 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_07225 4dc000aeb7111feaaaf608979d29711c 226 Gene3D G3DSA:1.10.357.10 3 226 8.6E-58 T 12-10-2018 BEN31_07225 4dc000aeb7111feaaaf608979d29711c 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 60 1.5E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07225 4dc000aeb7111feaaaf608979d29711c 226 SUPERFAMILY SSF46689 19 79 5.2E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_07225 4dc000aeb7111feaaaf608979d29711c 226 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 82 223 1.2E-10 T 12-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 BEN31_07225 4dc000aeb7111feaaaf608979d29711c 226 SUPERFAMILY SSF48498 87 222 1.33E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_09280 f0a2b475aca72d7140238bc01ddd924b 425 Pfam PF07690 Major Facilitator Superfamily 12 356 5.6E-25 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_09280 f0a2b475aca72d7140238bc01ddd924b 425 SUPERFAMILY SSF103473 5 407 6.28E-39 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_09280 f0a2b475aca72d7140238bc01ddd924b 425 TIGRFAM TIGR00900 2A0121: H+ Antiporter protein 9 377 7.6E-106 T 12-10-2018 IPR004751 Drug antiporter protein GO:0015307|GO:0015893 BEN31_09280 f0a2b475aca72d7140238bc01ddd924b 425 Gene3D G3DSA:1.20.1250.20 219 413 3.7E-14 T 12-10-2018 BEN31_09280 f0a2b475aca72d7140238bc01ddd924b 425 Gene3D G3DSA:1.20.1250.20 1 186 9.3E-18 T 12-10-2018 BEN31_04960 f11e7b1bc74598f5024de22bd9f2e09d 166 Pfam PF15980 Putative Competence protein ComGF 60 152 4.8E-19 T 12-10-2018 IPR016977 Competence operon G, ComGF BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 Pfam PF00364 Biotin-requiring enzyme 82 153 2.1E-21 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 2 156 1.6E-57 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 Gene3D G3DSA:2.40.50.100 78 155 3.1E-26 T 12-10-2018 BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 12-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 5.7E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 5.7E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 5.7E-15 T 12-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 BEN31_05120 cdf5b20842d7c2cb7983554a0e7c2768 158 SUPERFAMILY SSF51230 79 155 9.82E-22 T 12-10-2018 IPR011053 Single hybrid motif BEN31_12485 859cd21b3484e6e2112c9bcd3a809c4b 89 SUPERFAMILY SSF47336 4 82 2.09E-12 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12485 859cd21b3484e6e2112c9bcd3a809c4b 89 Pfam PF00550 Phosphopantetheine attachment site 5 76 7.2E-8 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12485 859cd21b3484e6e2112c9bcd3a809c4b 89 Gene3D G3DSA:1.10.1200.10 1 85 7.7E-19 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1709 1798 2.2E-22 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1245 1337 1.4E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1338 1428 9.2E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1799 1891 1.8E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1614 1708 1.9E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1522 1613 1.2E-19 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1155 1244 1.5E-27 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1429 1521 3.1E-26 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.1280 218 349 1.7E-18 T 12-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2012 2044 6.8E-5 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.740 767 918 8.1E-7 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.740 350 487 1.3E-9 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1904 1965 5.1E-7 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.1280 27 164 1.1E-8 T 12-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49401 210 345 4.35E-24 T 12-10-2018 IPR008966 Adhesion domain superfamily BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1811 1876 1.61E-7 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1721 1782 1.8E-7 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Pfam PF05737 Collagen binding domain 352 474 3.2E-23 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Pfam PF05737 Collagen binding domain 767 898 1.4E-25 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Pfam PF05737 Collagen binding domain 634 726 2.6E-7 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Pfam PF05737 Collagen binding domain 495 602 6.3E-18 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Pfam PF05737 Collagen binding domain 917 1035 2.3E-13 T 12-10-2018 IPR008456 Collagen binding domain GO:0005518 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1259 1322 9.02E-8 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49401 633 751 6.21E-18 T 12-10-2018 IPR008966 Adhesion domain superfamily BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49401 491 617 4.47E-21 T 12-10-2018 IPR008966 Adhesion domain superfamily BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Pfam PF00746 LPXTG cell wall anchor motif 2006 2044 3.6E-5 T 12-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1630 1694 1.8E-7 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1059 1154 1.4E-20 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.10 1897 2017 3.4E-23 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 Gene3D G3DSA:2.60.40.740 624 766 1.6E-5 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1535 1599 2.86E-6 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49401 351 488 1.49E-20 T 12-10-2018 IPR008966 Adhesion domain superfamily BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49401 909 1043 7.95E-25 T 12-10-2018 IPR008966 Adhesion domain superfamily BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1443 1505 5.89E-7 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49401 766 906 3.23E-25 T 12-10-2018 IPR008966 Adhesion domain superfamily BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1351 1412 8.63E-8 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1064 1135 3.22E-9 T 12-10-2018 BEN31_11865 e9857aa79c076621d0dd3ba136a76ccf 2047 SUPERFAMILY SSF49478 1166 1229 1.69E-8 T 12-10-2018 BEN31_14530 740dca5d0a34f37282bee0374da5f396 76 Pfam PF01206 Sulfurtransferase TusA 6 74 1.5E-23 T 12-10-2018 IPR001455 TusA-like domain BEN31_14530 740dca5d0a34f37282bee0374da5f396 76 SUPERFAMILY SSF64307 3 75 4.45E-25 T 12-10-2018 IPR036868 TusA-like domain superfamily BEN31_14530 740dca5d0a34f37282bee0374da5f396 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 12-10-2018 IPR001455 TusA-like domain BEN31_14530 740dca5d0a34f37282bee0374da5f396 76 Gene3D G3DSA:3.30.110.40 1 76 8.2E-29 T 12-10-2018 IPR036868 TusA-like domain superfamily BEN31_06200 9070f1a4ac46395a234a7ef3c69a8bd7 645 Gene3D G3DSA:3.40.50.300 37 316 1.3E-27 T 12-10-2018 BEN31_06200 9070f1a4ac46395a234a7ef3c69a8bd7 645 Pfam PF13307 Helicase C-terminal domain 487 637 1.6E-26 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN31_06200 9070f1a4ac46395a234a7ef3c69a8bd7 645 Gene3D G3DSA:3.40.50.300 462 638 6.3E-25 T 12-10-2018 BEN31_06200 9070f1a4ac46395a234a7ef3c69a8bd7 645 SUPERFAMILY SSF52540 52 623 4.89E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06200 9070f1a4ac46395a234a7ef3c69a8bd7 645 SMART SM00491 500 626 4.2E-7 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN31_09165 35d4727a180b19208285f85d5f2df975 193 SUPERFAMILY SSF53448 2 187 1.26E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_09165 35d4727a180b19208285f85d5f2df975 193 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 190 22.27 T 12-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 BEN31_09165 35d4727a180b19208285f85d5f2df975 193 Pfam PF12804 MobA-like NTP transferase domain 6 161 3.1E-30 T 12-10-2018 IPR025877 MobA-like NTP transferase BEN31_09165 35d4727a180b19208285f85d5f2df975 193 Gene3D G3DSA:3.90.550.10 5 191 5.7E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 SUPERFAMILY SSF52467 190 353 7.73E-31 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 538 4.0E-42 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 332 1.3E-26 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 12 549 2.1E-249 T 12-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 SUPERFAMILY SSF52518 366 553 7.37E-58 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 Gene3D G3DSA:3.40.50.970 365 564 1.5E-56 T 12-10-2018 BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 Gene3D G3DSA:3.40.50.1220 188 363 5.1E-37 T 12-10-2018 BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 Gene3D G3DSA:3.40.50.970 1 186 8.3E-68 T 12-10-2018 BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 SUPERFAMILY SSF52518 7 183 1.18E-49 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_17890 9d0ee5e3dbbc668f832f99ca6b756e36 566 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 177 1.6E-52 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 SMART SM00436 104 192 1.5E-52 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 689 0.017 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 7.7E-13 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 577 613 2.0E-16 T 12-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Gene3D G3DSA:3.30.65.10 559 618 1.7E-14 T 12-10-2018 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Pfam PF01131 DNA topoisomerase 128 547 3.0E-139 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 57.105 T 12-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 4.1E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 4.1E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 4.1E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 4.1E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 4.1E-37 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Gene3D G3DSA:2.70.20.10 184 457 3.6E-171 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 SMART SM00493 3 103 1.6E-31 T 12-10-2018 IPR006171 TOPRIM domain BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Gene3D G3DSA:1.10.460.10 135 550 3.6E-171 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 5.6E-274 T 12-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 SUPERFAMILY SSF57783 569 612 1.33E-14 T 12-10-2018 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Gene3D G3DSA:3.40.50.140 1 134 1.1E-53 T 12-10-2018 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Gene3D G3DSA:1.10.290.10 250 385 3.6E-171 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 Pfam PF01751 Toprim domain 5 113 1.6E-29 T 12-10-2018 IPR006171 TOPRIM domain BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 SMART SM00437 242 510 1.2E-137 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BEN31_08245 a00724bf92c25dcaabb0f93a44e16201 691 SUPERFAMILY SSF56712 4 589 3.14E-203 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 Pfam PF13840 ACT domain 337 398 9.3E-21 T 12-10-2018 IPR027795 CASTOR, ACT domain BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 SUPERFAMILY SSF55021 260 346 1.83E-11 T 12-10-2018 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 403 5.5E-144 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 SUPERFAMILY SSF55021 335 403 9.51E-16 T 12-10-2018 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 Pfam PF00696 Amino acid kinase family 2 235 7.6E-47 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 PIRSF PIRSF000726 1 65 8.5E-9 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 PIRSF PIRSF000726 60 404 4.5E-91 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 401 2.2E-92 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 Gene3D G3DSA:3.40.1160.10 1 255 3.6E-84 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 Gene3D G3DSA:3.30.2130.10 256 404 1.3E-31 T 12-10-2018 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_07895 ae3197c5f5f0471d3efd5a900499e394 404 SUPERFAMILY SSF53633 3 248 4.58E-69 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 Gene3D G3DSA:1.20.1560.10 3 314 5.6E-43 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 SUPERFAMILY SSF52540 331 570 2.49E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 SMART SM00382 360 546 2.6E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 SUPERFAMILY SSF90123 8 296 2.09E-50 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 12 542 4.6E-175 T 12-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 Gene3D G3DSA:3.40.50.300 319 573 1.4E-78 T 12-10-2018 BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 Pfam PF00005 ABC transporter 352 500 2.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16820 5bdbc3c2c6a67688732f49a70425e4a1 578 Pfam PF00664 ABC transporter transmembrane region 16 276 3.6E-31 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_01190 f7d766be71356c8e947f2a0e9650fc7f 352 Gene3D G3DSA:1.10.3470.10 9 351 6.1E-100 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01190 f7d766be71356c8e947f2a0e9650fc7f 352 Pfam PF01032 FecCD transport family 23 344 2.6E-93 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_01190 f7d766be71356c8e947f2a0e9650fc7f 352 SUPERFAMILY SSF81345 8 344 9.02E-81 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_18325 5c3b7a97ca858de4684549042d596a50 134 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 121 2.7E-47 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BEN31_18325 5c3b7a97ca858de4684549042d596a50 134 PIRSF PIRSF039090 1 129 1.4E-35 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BEN31_18325 5c3b7a97ca858de4684549042d596a50 134 Pfam PF02561 Flagellar protein FliS 7 118 4.6E-39 T 12-10-2018 IPR003713 Flagellar protein FliS GO:0044780 BEN31_18325 5c3b7a97ca858de4684549042d596a50 134 SUPERFAMILY SSF101116 4 122 5.36E-38 T 12-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 BEN31_18325 5c3b7a97ca858de4684549042d596a50 134 Gene3D G3DSA:1.20.120.340 1 122 1.4E-39 T 12-10-2018 BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 Gene3D G3DSA:3.40.190.290 92 290 4.7E-44 T 12-10-2018 BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.3E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 SUPERFAMILY SSF53850 90 294 5.26E-40 T 12-10-2018 BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-7 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 Pfam PF03466 LysR substrate binding domain 89 276 8.9E-45 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 SUPERFAMILY SSF46785 3 111 7.79E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_16410 6bcc0d4a861dd77c272c151c9a837aff 299 Gene3D G3DSA:1.10.10.10 1 91 9.7E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08405 65987d17793a4dac244945fceb5e260a 216 Gene3D G3DSA:3.20.20.70 1 216 9.2E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_08405 65987d17793a4dac244945fceb5e260a 216 PIRSF PIRSF001461 1 216 2.5E-96 T 12-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN31_08405 65987d17793a4dac244945fceb5e260a 216 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN31_08405 65987d17793a4dac244945fceb5e260a 216 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 214 1.8E-93 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN31_08405 65987d17793a4dac244945fceb5e260a 216 SUPERFAMILY SSF51366 2 214 3.3E-76 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_08405 65987d17793a4dac244945fceb5e260a 216 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 201 7.3E-90 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Gene3D G3DSA:1.10.3710.10 366 421 1.8E-16 T 12-10-2018 BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Gene3D G3DSA:1.10.3710.10 331 365 4.6E-8 T 12-10-2018 BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 SMART SM00382 37 149 1.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 125 3.1E-15 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Gene3D G3DSA:1.20.272.10 226 330 5.5E-43 T 12-10-2018 BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Pfam PF12002 MgsA AAA+ ATPase C terminal 252 417 3.0E-67 T 12-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 SUPERFAMILY SSF52540 2 218 1.29E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Gene3D G3DSA:3.40.50.300 1 148 1.0E-38 T 12-10-2018 BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 SUPERFAMILY SSF48019 237 419 4.25E-73 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Pfam PF16193 AAA C-terminal domain 172 251 3.2E-26 T 12-10-2018 IPR032423 AAA C-terminal domain BEN31_04015 a61bc163ffb5faa165acdaa41f6173b4 421 Gene3D G3DSA:1.10.8.60 149 224 1.5E-19 T 12-10-2018 BEN31_08770 529cd929437a26ce8a4ba7225d2ca551 299 Gene3D G3DSA:3.40.50.720 1 170 1.5E-55 T 12-10-2018 BEN31_08770 529cd929437a26ce8a4ba7225d2ca551 299 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 146 2.9E-26 T 12-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain BEN31_08770 529cd929437a26ce8a4ba7225d2ca551 299 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 6.4E-68 T 12-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 BEN31_08770 529cd929437a26ce8a4ba7225d2ca551 299 SUPERFAMILY SSF48179 175 291 2.24E-25 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_08770 529cd929437a26ce8a4ba7225d2ca551 299 SUPERFAMILY SSF51735 2 151 2.41E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_08770 529cd929437a26ce8a4ba7225d2ca551 299 Gene3D G3DSA:1.10.1040.10 171 299 2.6E-41 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_08770 529cd929437a26ce8a4ba7225d2ca551 299 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 175 289 1.8E-28 T 12-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 SUPERFAMILY SSF51735 7 187 2.76E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 180 186 - T 12-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 PIRSF PIRSF000110 1 491 1.5E-186 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 7.7E-202 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 SUPERFAMILY SSF55347 185 489 4.9E-116 T 12-10-2018 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 490 88.687 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 Gene3D G3DSA:3.30.360.10 179 490 2.4E-123 T 12-10-2018 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 193 488 1.6E-113 T 12-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 190 6.9E-61 T 12-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 170 198 1.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 240 256 1.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 146 159 1.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 331 357 1.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 222 239 1.1E-47 T 12-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 BEN31_05365 dfdb814fe7e70fe73efbb554e6858ed7 491 Gene3D G3DSA:3.40.50.720 6 178 2.9E-58 T 12-10-2018 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 SUPERFAMILY SSF55681 244 526 3.78E-93 T 12-10-2018 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 528 2.0E-38 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Gene3D G3DSA:3.30.980.10 73 223 3.5E-63 T 12-10-2018 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Pfam PF03129 Anticodon binding domain 541 625 6.8E-21 T 12-10-2018 IPR004154 Anticodon-binding BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 SUPERFAMILY SSF81271 6 65 2.18E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 626 9.0E-233 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 SUPERFAMILY SSF55186 67 241 5.1E-61 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Gene3D G3DSA:3.40.50.800 532 639 2.4E-31 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.7E-52 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 SUPERFAMILY SSF52954 530 634 3.93E-29 T 12-10-2018 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 634 34.369 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Gene3D G3DSA:3.30.930.10 224 531 1.5E-130 T 12-10-2018 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Gene3D G3DSA:3.10.20.30 4 66 4.7E-23 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Gene3D G3DSA:3.30.54.20 134 188 3.5E-63 T 12-10-2018 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 1.6E-14 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 Pfam PF02824 TGS domain 6 65 8.2E-13 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BEN31_11890 f2a1931c3268bc3acb4902080ed8dd1e 640 SMART SM00863 171 220 5.1E-22 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 PRINTS PR00171 Sugar transporter signature 101 120 9.7E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 PRINTS PR00171 Sugar transporter signature 18 28 9.7E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 PRINTS PR00171 Sugar transporter signature 254 264 9.7E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 PRINTS PR00171 Sugar transporter signature 366 378 9.7E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 PRINTS PR00171 Sugar transporter signature 343 364 9.7E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 SUPERFAMILY SSF103473 8 439 1.2E-73 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 Gene3D G3DSA:1.20.1250.20 4 440 8.7E-118 T 12-10-2018 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 Pfam PF00083 Sugar (and other) transporter 13 441 4.2E-108 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BEN31_04325 92669a450b91ffb21fb516b10b2eef72 446 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 438 1.3E-105 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:1.10.1200.10 963 1048 2.1E-23 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 SUPERFAMILY SSF53474 1054 1258 1.16E-30 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 489 889 3.5E-128 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:3.30.559.30 194 445 5.4E-140 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 SUPERFAMILY SSF52777 193 453 7.23E-53 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:1.10.287.490 1160 1206 1.3E-61 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Pfam PF00668 Condensation domain 9 448 8.1E-117 T 12-10-2018 IPR001242 Condensation domain BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Pfam PF00501 AMP-binding enzyme 468 866 5.7E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 SUPERFAMILY SSF56801 427 986 2.22E-151 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:3.40.50.980 472 778 8.1E-103 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:3.30.300.30 860 961 3.6E-31 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:2.30.38.10 779 856 6.1E-31 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 ProSitePatterns PS00455 Putative AMP-binding domain signature. 610 621 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Pfam PF13193 AMP-binding enzyme C-terminal domain 874 949 1.8E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:3.40.50.1820 1057 1264 1.3E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 SUPERFAMILY SSF52777 15 192 4.22E-43 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 SUPERFAMILY SSF47336 970 1040 1.3E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 SMART SM00823 Phosphopantetheine attachment site 975 1044 0.0035 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Pfam PF00975 Thioesterase domain 1060 1254 1.8E-20 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:3.40.50.980 490 625 8.1E-103 T 12-10-2018 BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Pfam PF00550 Phosphopantetheine attachment site 977 1040 2.8E-16 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13895 8e42f791c2c54a59af7ffe9186b57802 1277 Gene3D G3DSA:3.30.559.10 15 380 5.4E-140 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_02025 e8ee5655cde4aed80cbad821fc1c050e 334 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.0E-25 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BEN31_02025 e8ee5655cde4aed80cbad821fc1c050e 334 SUPERFAMILY SSF51735 2 151 2.63E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_02025 e8ee5655cde4aed80cbad821fc1c050e 334 Gene3D G3DSA:3.30.360.10 134 327 2.4E-62 T 12-10-2018 BEN31_02025 e8ee5655cde4aed80cbad821fc1c050e 334 Gene3D G3DSA:3.40.50.720 1 133 3.5E-36 T 12-10-2018 BEN31_02025 e8ee5655cde4aed80cbad821fc1c050e 334 SUPERFAMILY SSF55347 126 291 1.24E-32 T 12-10-2018 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 Pfam PF00664 ABC transporter transmembrane region 18 280 1.7E-14 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 531 1.3E-165 T 12-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 Gene3D G3DSA:1.20.1560.10 6 316 4.7E-25 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 SUPERFAMILY SSF90123 6 486 9.29E-39 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 Pfam PF00005 ABC transporter 353 500 1.1E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 Gene3D G3DSA:3.40.50.300 328 573 7.9E-76 T 12-10-2018 BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 SUPERFAMILY SSF52540 332 570 2.36E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16825 b42e6c909df21a95faafc95b36362aa5 577 SMART SM00382 362 554 3.0E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_01545 3ace48c6ffaf989a8dccaffe52d42fd8 353 Gene3D G3DSA:3.40.50.1100 59 155 1.2E-123 T 12-10-2018 BEN31_01545 3ace48c6ffaf989a8dccaffe52d42fd8 353 SUPERFAMILY SSF53686 6 349 9.17E-107 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN31_01545 3ace48c6ffaf989a8dccaffe52d42fd8 353 PIRSF PIRSF038945 1 349 1.5E-159 T 12-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 BEN31_01545 3ace48c6ffaf989a8dccaffe52d42fd8 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BEN31_01545 3ace48c6ffaf989a8dccaffe52d42fd8 353 Gene3D G3DSA:3.40.50.1100 13 322 1.2E-123 T 12-10-2018 BEN31_01545 3ace48c6ffaf989a8dccaffe52d42fd8 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 316 7.1E-75 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN31_01545 3ace48c6ffaf989a8dccaffe52d42fd8 353 TIGRFAM TIGR00260 thrC: threonine synthase 8 323 2.1E-111 T 12-10-2018 IPR004450 Threonine synthase-like BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 SUPERFAMILY SSF54736 50 121 7.15E-25 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 2.3E-19 T 12-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 94 9.0E-15 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 SUPERFAMILY SSF48300 4 56 1.57E-14 T 12-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 2.2E-30 T 12-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.1E-50 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 Gene3D G3DSA:3.30.1390.10 51 121 7.6E-31 T 12-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 Gene3D G3DSA:1.20.5.710 3 50 1.5E-19 T 12-10-2018 BEN31_15100 4c781215f5eb967159f1c8dc370dac66 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.537 T 12-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04905 cce78e94d69cde293b63321b3a1df047 212 SMART SM00849 12 191 1.3E-39 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_04905 cce78e94d69cde293b63321b3a1df047 212 Gene3D G3DSA:3.60.15.10 1 211 1.8E-61 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_04905 cce78e94d69cde293b63321b3a1df047 212 Pfam PF00753 Metallo-beta-lactamase superfamily 11 191 5.3E-33 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_04905 cce78e94d69cde293b63321b3a1df047 212 SUPERFAMILY SSF56281 5 208 3.41E-50 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_03340 3bfefdf6bffcfe6faad2bc3d6b4f87d3 259 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 104 225 9.1E-15 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN31_03340 3bfefdf6bffcfe6faad2bc3d6b4f87d3 259 SUPERFAMILY SSF56784 1 258 2.63E-43 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_03340 3bfefdf6bffcfe6faad2bc3d6b4f87d3 259 Gene3D G3DSA:3.40.50.1000 3 254 4.1E-48 T 12-10-2018 IPR023214 HAD superfamily BEN31_03340 3bfefdf6bffcfe6faad2bc3d6b4f87d3 259 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 109 231 6.9E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN31_03340 3bfefdf6bffcfe6faad2bc3d6b4f87d3 259 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 231 3.7E-24 T 12-10-2018 BEN31_03340 3bfefdf6bffcfe6faad2bc3d6b4f87d3 259 Gene3D G3DSA:1.10.150.240 14 131 4.1E-48 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN31_07865 9914fa2886e8126cbd720a974c080688 241 SMART SM00866 95 233 3.5E-24 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_07865 9914fa2886e8126cbd720a974c080688 241 Pfam PF07702 UTRA domain 97 232 2.2E-28 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_07865 9914fa2886e8126cbd720a974c080688 241 SUPERFAMILY SSF64288 62 239 1.88E-36 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_07865 9914fa2886e8126cbd720a974c080688 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.8E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_07865 9914fa2886e8126cbd720a974c080688 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.8E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_07865 9914fa2886e8126cbd720a974c080688 241 Gene3D G3DSA:1.10.10.10 2 74 1.7E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07865 9914fa2886e8126cbd720a974c080688 241 SMART SM00345 14 73 2.2E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_07865 9914fa2886e8126cbd720a974c080688 241 SUPERFAMILY SSF46785 2 88 3.67E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07865 9914fa2886e8126cbd720a974c080688 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 9.3E-21 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_07865 9914fa2886e8126cbd720a974c080688 241 Gene3D G3DSA:3.40.1410.10 77 238 5.0E-28 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_05585 ccf23512633e20c05d306449cf646542 338 SUPERFAMILY SSF53901 57 313 1.11E-16 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_05585 ccf23512633e20c05d306449cf646542 338 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 5 332 6.7E-151 T 12-10-2018 IPR010894 Stage V sporulation AD BEN31_05585 ccf23512633e20c05d306449cf646542 338 Gene3D G3DSA:3.40.47.40 1 338 7.5E-159 T 12-10-2018 IPR038369 Stage V sporulation AD superfamily BEN31_05585 ccf23512633e20c05d306449cf646542 338 PIRSF PIRSF011570 1 335 2.3E-164 T 12-10-2018 IPR010894 Stage V sporulation AD BEN31_05585 ccf23512633e20c05d306449cf646542 338 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 6 332 7.9E-164 T 12-10-2018 IPR010894 Stage V sporulation AD BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 324 2.1E-14 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 TIGRFAM TIGR00433 bioB: biotin synthase 33 324 1.0E-118 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 SMART SM00876 236 326 3.5E-31 T 12-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 Hamap MF_01694 Biotin synthase [bioB]. 20 327 39.512 T 12-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 Gene3D G3DSA:3.20.20.70 24 328 6.7E-107 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 Pfam PF04055 Radical SAM superfamily 69 224 3.4E-14 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 PIRSF PIRSF001619 3 331 2.0E-121 T 12-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 SUPERFAMILY SSF102114 20 327 3.27E-69 T 12-10-2018 BEN31_02055 640d622e9380dca27877828f6f9ad6f3 331 SMART SM00729 60 268 1.4E-30 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 SUPERFAMILY SSF55890 326 380 3.14E-12 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 Pfam PF17203 Single cache domain 3 45 173 9.1E-21 T 12-10-2018 IPR033463 Single cache domain 3 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 325 375 1.3E-9 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 Gene3D G3DSA:3.30.450.20 206 318 1.1E-24 T 12-10-2018 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 2.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 512 2.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 531 2.2E-11 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 SUPERFAMILY SSF55785 222 300 1.19E-9 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 533 2.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 SMART SM00091 219 284 7.0E-5 T 12-10-2018 IPR000014 PAS domain BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 Gene3D G3DSA:3.30.450.20 39 169 1.7E-36 T 12-10-2018 BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 SUPERFAMILY SSF103190 44 174 1.02E-32 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 SUPERFAMILY SSF55874 390 533 5.11E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 Pfam PF13426 PAS domain 230 319 1.2E-6 T 12-10-2018 IPR000014 PAS domain BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 Gene3D G3DSA:3.30.565.10 378 538 4.5E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 SMART SM00387 423 534 2.1E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_13455 bc6088484cf58410e98e430246f5ca81 539 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 220 327 8.0E-6 T 12-10-2018 IPR000014 PAS domain BEN31_13330 9896ac382a81bb448c4554d0b09ecdf8 133 Gene3D G3DSA:3.30.565.10 7 130 6.9E-16 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13330 9896ac382a81bb448c4554d0b09ecdf8 133 SUPERFAMILY SSF55874 21 127 2.86E-13 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13330 9896ac382a81bb448c4554d0b09ecdf8 133 Pfam PF13581 Histidine kinase-like ATPase domain 15 130 6.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 SUPERFAMILY SSF50341 8 153 1.57E-32 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 Pfam PF00072 Response regulator receiver domain 178 297 3.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 Pfam PF01584 CheW-like domain 19 152 1.3E-33 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 SMART SM00260 14 149 3.3E-36 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 Gene3D G3DSA:2.40.50.180 35 149 4.4E-35 T 12-10-2018 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 SMART SM00448 175 297 1.5E-25 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 Gene3D G3DSA:3.40.50.2300 161 301 5.6E-25 T 12-10-2018 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 PIRSF PIRSF002867 2 302 4.3E-96 T 12-10-2018 IPR024181 Chemotaxis response regulator CheV BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 Gene3D G3DSA:2.30.30.40 20 143 4.4E-35 T 12-10-2018 BEN31_09295 522d9d05f38d22df94d9cadb4aee494c 302 SUPERFAMILY SSF52172 173 298 8.97E-25 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 SUPERFAMILY SSF55060 205 385 2.26E-51 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 Pfam PF00288 GHMP kinases N terminal domain 114 181 3.7E-13 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 12-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00473 Galactokinase signature 112 130 1.6E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00473 Galactokinase signature 91 102 1.6E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00473 Galactokinase signature 26 44 1.6E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00473 Galactokinase signature 269 283 1.6E-28 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PIRSF PIRSF000530 1 388 6.4E-117 T 12-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 Gene3D G3DSA:3.30.230.10 21 201 3.5E-134 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 SUPERFAMILY SSF54211 2 202 6.91E-61 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 Pfam PF10509 Galactokinase galactose-binding signature 8 57 5.0E-23 T 12-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 Gene3D G3DSA:3.30.70.890 202 360 3.5E-134 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 TIGRFAM TIGR00131 gal_kin: galactokinase 5 386 1.3E-130 T 12-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 Hamap MF_00246 Galactokinase [galK]. 24 386 45.454 T 12-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00959 Mevalonate kinase family signature 162 181 1.7E-43 T 12-10-2018 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00959 Mevalonate kinase family signature 24 48 1.7E-43 T 12-10-2018 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00959 Mevalonate kinase family signature 119 141 1.7E-43 T 12-10-2018 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 PRINTS PR00959 Mevalonate kinase family signature 333 350 1.7E-43 T 12-10-2018 BEN31_17030 21dbec4dce6f1b5a8bd152bc8e4f4663 392 Pfam PF08544 GHMP kinases C terminal 293 353 2.8E-6 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain BEN31_07640 7807f0d9c204fd180364978e4c2aadb5 326 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 5 322 5.7E-145 T 12-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_07640 7807f0d9c204fd180364978e4c2aadb5 326 SUPERFAMILY SSF47240 4 320 2.84E-91 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_07640 7807f0d9c204fd180364978e4c2aadb5 326 PIRSF PIRSF000355 1 319 1.2E-91 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07640 7807f0d9c204fd180364978e4c2aadb5 326 Pfam PF00268 Ribonucleotide reductase, small chain 8 284 8.8E-81 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07640 7807f0d9c204fd180364978e4c2aadb5 326 Gene3D G3DSA:1.10.620.20 3 293 4.7E-113 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BEN31_07640 7807f0d9c204fd180364978e4c2aadb5 326 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 96 113 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_17965 7378efd63f87d49dca8300573529c585 407 SUPERFAMILY SSF54001 288 406 2.89E-29 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_17965 7378efd63f87d49dca8300573529c585 407 Pfam PF00877 NlpC/P60 family 301 402 4.2E-18 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN31_17965 7378efd63f87d49dca8300573529c585 407 Pfam PF00877 NlpC/P60 family 171 277 6.1E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN31_17965 7378efd63f87d49dca8300573529c585 407 Pfam PF00877 NlpC/P60 family 40 149 5.0E-21 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN31_17965 7378efd63f87d49dca8300573529c585 407 SUPERFAMILY SSF54001 156 281 1.37E-38 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_17965 7378efd63f87d49dca8300573529c585 407 Gene3D G3DSA:3.90.1720.10 20 157 6.8E-35 T 12-10-2018 BEN31_17965 7378efd63f87d49dca8300573529c585 407 Gene3D G3DSA:3.90.1720.10 158 282 1.7E-43 T 12-10-2018 BEN31_17965 7378efd63f87d49dca8300573529c585 407 Gene3D G3DSA:3.90.1720.10 283 407 2.4E-32 T 12-10-2018 BEN31_17965 7378efd63f87d49dca8300573529c585 407 SUPERFAMILY SSF54001 23 153 5.4E-33 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_08775 7905b415ddbacf10d6943d56e37e6440 159 PIRSF PIRSF037732 1 159 5.7E-84 T 12-10-2018 IPR017274 Putative N-acetyltransferase YlbP BEN31_08775 7905b415ddbacf10d6943d56e37e6440 159 SUPERFAMILY SSF55729 25 141 6.65E-15 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_08775 7905b415ddbacf10d6943d56e37e6440 159 Pfam PF13508 Acetyltransferase (GNAT) domain 66 129 1.5E-7 T 12-10-2018 IPR000182 GNAT domain BEN31_08775 7905b415ddbacf10d6943d56e37e6440 159 Gene3D G3DSA:3.40.630.30 1 159 4.5E-61 T 12-10-2018 BEN31_08775 7905b415ddbacf10d6943d56e37e6440 159 Hamap MF_00824 Uncharacterized N-acetyltransferase . 1 148 42.269 T 12-10-2018 IPR017274 Putative N-acetyltransferase YlbP BEN31_18310 b409ea9b2934806620e820a326664107 74 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 1.0E-17 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN31_18310 b409ea9b2934806620e820a326664107 74 Pfam PF02599 Global regulator protein family 1 53 3.8E-26 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN31_18310 b409ea9b2934806620e820a326664107 74 Gene3D G3DSA:3.30.70.1680 1 63 2.7E-30 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BEN31_18310 b409ea9b2934806620e820a326664107 74 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 17.886 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN31_18310 b409ea9b2934806620e820a326664107 74 SUPERFAMILY SSF117130 1 55 5.75E-21 T 12-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 BEN31_18310 b409ea9b2934806620e820a326664107 74 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 69 4.4E-32 T 12-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 BEN31_13535 760c499d8f07f49f64ca287444725515 283 Gene3D G3DSA:3.30.70.270 118 281 8.0E-18 T 12-10-2018 BEN31_13535 760c499d8f07f49f64ca287444725515 283 Pfam PF00990 Diguanylate cyclase, GGDEF domain 133 279 6.9E-20 T 12-10-2018 IPR000160 GGDEF domain BEN31_13535 760c499d8f07f49f64ca287444725515 283 SMART SM00267 121 283 3.4E-13 T 12-10-2018 IPR000160 GGDEF domain BEN31_13535 760c499d8f07f49f64ca287444725515 283 SUPERFAMILY SSF55073 138 278 1.33E-13 T 12-10-2018 IPR029787 Nucleotide cyclase BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 Gene3D G3DSA:3.30.160.270 377 549 8.3E-43 T 12-10-2018 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 240 253 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 SUPERFAMILY SSF51569 24 327 8.24E-92 T 12-10-2018 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 Pfam PF08502 LeuA allosteric (dimerisation) domain 423 549 3.5E-23 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 SUPERFAMILY SSF89000 388 438 1.41E-11 T 12-10-2018 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 Pfam PF00682 HMGL-like 31 307 5.1E-70 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 SMART SM00917 422 550 8.8E-25 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 SUPERFAMILY SSF110921 442 549 3.4E-23 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 Gene3D G3DSA:3.20.20.70 14 374 1.9E-135 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_12765 63fa059c5761aea7afe2def27adf8be6 553 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 1 551 49.88 T 12-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 Gene3D G3DSA:3.40.50.970 378 579 8.4E-69 T 12-10-2018 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 PIRSF PIRSF004983 2 576 4.7E-197 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 Pfam PF16582 Middle domain of thiamine pyrophosphate 217 401 5.0E-17 T 12-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 SUPERFAMILY SSF52518 384 567 7.94E-30 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 3 569 37.003 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 SUPERFAMILY SSF52518 6 179 6.87E-35 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 Gene3D G3DSA:3.40.50.970 1 173 2.7E-69 T 12-10-2018 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 444 8.1E-153 T 12-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 175 3.1E-36 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 SUPERFAMILY SSF52467 166 370 4.5E-10 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 551 4.4E-8 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BEN31_02435 55a3e697ab67eea95a40fcfe5f64a883 580 Gene3D G3DSA:3.40.50.1220 197 376 4.4E-53 T 12-10-2018 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 SUPERFAMILY SSF53067 3 140 7.92E-39 T 12-10-2018 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 SUPERFAMILY SSF53067 142 325 9.26E-51 T 12-10-2018 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 Gene3D G3DSA:3.90.640.10 178 251 1.6E-127 T 12-10-2018 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 Pfam PF06723 MreB/Mbl protein 4 327 3.0E-150 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 2.2E-136 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 1.1E-58 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 1.1E-58 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 1.1E-58 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 1.1E-58 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 1.1E-58 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 Gene3D G3DSA:3.30.420.40 146 309 1.6E-127 T 12-10-2018 BEN31_17805 f17c046cf2fef7a5fa4da90aa506d745 333 Gene3D G3DSA:3.30.420.40 6 319 1.6E-127 T 12-10-2018 BEN31_16140 861b0d505125db76d86cc981cef56724 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 3.1E-60 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN31_16140 861b0d505125db76d86cc981cef56724 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 159 1.7E-74 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN31_16140 861b0d505125db76d86cc981cef56724 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.527 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN31_16140 861b0d505125db76d86cc981cef56724 159 PIRSF PIRSF004505 1 159 5.4E-54 T 12-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 BEN31_16140 861b0d505125db76d86cc981cef56724 159 Gene3D G3DSA:3.40.1280.10 1 159 9.7E-70 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN31_16140 861b0d505125db76d86cc981cef56724 159 SUPERFAMILY SSF75217 2 157 6.47E-63 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN31_00735 2f98552150505af39e60cbc0dfd669ee 67 SMART SM00530 10 65 3.1E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00735 2f98552150505af39e60cbc0dfd669ee 67 Pfam PF01381 Helix-turn-helix 11 62 2.3E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00735 2f98552150505af39e60cbc0dfd669ee 67 SUPERFAMILY SSF47413 2 66 6.34E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_00735 2f98552150505af39e60cbc0dfd669ee 67 Gene3D G3DSA:1.10.260.40 3 67 2.5E-18 T 12-10-2018 BEN31_01870 0be4f0987384e6f2c039993dfb0a4b5d 633 Gene3D G3DSA:1.10.3810.10 64 265 9.0E-71 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_01870 0be4f0987384e6f2c039993dfb0a4b5d 633 SUPERFAMILY SSF56601 230 632 2.62E-94 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_01870 0be4f0987384e6f2c039993dfb0a4b5d 633 Pfam PF00912 Transglycosylase 72 246 8.7E-61 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_01870 0be4f0987384e6f2c039993dfb0a4b5d 633 SUPERFAMILY SSF53955 61 278 7.03E-72 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BEN31_01870 0be4f0987384e6f2c039993dfb0a4b5d 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 363 603 1.8E-24 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_01870 0be4f0987384e6f2c039993dfb0a4b5d 633 Gene3D G3DSA:3.40.710.10 300 633 2.0E-93 T 12-10-2018 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 Gene3D G3DSA:3.40.50.2300 168 334 2.0E-76 T 12-10-2018 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 Gene3D G3DSA:3.40.50.2300 69 329 2.0E-76 T 12-10-2018 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 SMART SM00354 8 78 5.8E-30 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 SUPERFAMILY SSF53822 68 337 1.73E-75 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 12-10-2018 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 53 3.5E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 Pfam PF13377 Periplasmic binding protein-like domain 176 337 4.9E-33 T 12-10-2018 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 Gene3D G3DSA:1.10.260.40 1 65 5.9E-21 T 12-10-2018 BEN31_16255 a7704ff33c0b1d525fd76707b86d4b36 340 SUPERFAMILY SSF47413 7 66 9.96E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 8.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 8.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 8.6E-14 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 Pfam PF00106 short chain dehydrogenase 7 189 5.6E-52 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 5.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.1E-27 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 PIRSF PIRSF000126 3 258 6.6E-54 T 12-10-2018 BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 Gene3D G3DSA:3.40.50.720 1 258 2.3E-66 T 12-10-2018 BEN31_05410 7b5ecc7df777e8258622df6a0f3e8204 258 SUPERFAMILY SSF51735 1 254 1.76E-69 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_06850 063794339ae67807484f76009d59a252 804 SUPERFAMILY SSF51905 147 304 1.39E-27 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06850 063794339ae67807484f76009d59a252 804 PIRSF PIRSF037149 2 803 0.0 T 12-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 BEN31_06850 063794339ae67807484f76009d59a252 804 Gene3D G3DSA:3.50.50.60 7 280 2.1E-89 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 2.0E-11 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.0E-11 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 2.0E-11 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.0E-11 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 Gene3D G3DSA:3.30.390.30 316 399 1.2E-9 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_06850 063794339ae67807484f76009d59a252 804 Gene3D G3DSA:1.10.10.1100 415 470 1.7E-11 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 Pfam PF04324 BFD-like [2Fe-2S] binding domain 479 529 1.9E-11 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BEN31_06850 063794339ae67807484f76009d59a252 804 Pfam PF04324 BFD-like [2Fe-2S] binding domain 415 463 1.4E-15 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BEN31_06850 063794339ae67807484f76009d59a252 804 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 788 0.0 T 12-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 BEN31_06850 063794339ae67807484f76009d59a252 804 SUPERFAMILY SSF51905 5 190 2.79E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06850 063794339ae67807484f76009d59a252 804 SUPERFAMILY SSF56014 626 791 3.14E-47 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 625 759 3.6E-26 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_06850 063794339ae67807484f76009d59a252 804 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 281 1.3E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_06850 063794339ae67807484f76009d59a252 804 Gene3D G3DSA:3.30.413.10 624 796 5.9E-37 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.3E-21 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.3E-21 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 3.3E-21 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 3.3E-21 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 3.3E-21 T 12-10-2018 BEN31_06850 063794339ae67807484f76009d59a252 804 Gene3D G3DSA:3.50.50.60 110 244 2.1E-89 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06850 063794339ae67807484f76009d59a252 804 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 555 617 4.8E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_06850 063794339ae67807484f76009d59a252 804 SUPERFAMILY SSF55124 490 617 1.16E-24 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00397 Sirohaem Fe-binding site signature 672 690 1.1E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_06850 063794339ae67807484f76009d59a252 804 PRINTS PR00397 Sirohaem Fe-binding site signature 629 647 1.1E-6 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_15105 fae581b4e9893da8a0d6e5f8d9e5524c 166 SUPERFAMILY SSF160369 6 160 3.92E-55 T 12-10-2018 BEN31_15105 fae581b4e9893da8a0d6e5f8d9e5524c 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 5 144 0.003 T 12-10-2018 BEN31_15105 fae581b4e9893da8a0d6e5f8d9e5524c 166 Pfam PF00466 Ribosomal protein L10 6 101 9.8E-30 T 12-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 BEN31_15105 fae581b4e9893da8a0d6e5f8d9e5524c 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 12-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15105 fae581b4e9893da8a0d6e5f8d9e5524c 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.38 T 12-10-2018 IPR022973 Ribosomal protein L10 BEN31_15105 fae581b4e9893da8a0d6e5f8d9e5524c 166 Gene3D G3DSA:3.30.70.1730 3 165 1.0E-42 T 12-10-2018 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 Gene3D G3DSA:1.10.520.20 6 97 2.5E-13 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 PRINTS PR00125 ATP synthase delta subunit signature 6 25 3.4E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.4E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 PRINTS PR00125 ATP synthase delta subunit signature 136 151 3.4E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.4E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 PRINTS PR00125 ATP synthase delta subunit signature 151 169 3.4E-24 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 2.2E-48 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 SUPERFAMILY SSF47928 1 104 7.19E-23 T 12-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 12-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 1.5E-52 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17620 3fb9c3ca9db8c2cff66cebc4407ad715 181 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 19.351 T 12-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 Gene3D G3DSA:2.40.50.530 1 63 2.1E-21 T 12-10-2018 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 8.9E-27 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 SUPERFAMILY SSF143034 2 62 3.14E-22 T 12-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 12-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.267 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.2E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.2E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.2E-23 T 12-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 BEN31_03370 986cc7039bafd91db92d72f205d6aa96 66 Pfam PF01632 Ribosomal protein L35 2 61 2.6E-25 T 12-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_12525 9b18f83b33c01cdda23ed33c345a9ff7 395 Pfam PF07537 CamS sex pheromone cAM373 precursor 58 388 1.9E-124 T 12-10-2018 IPR011426 CamS sex pheromone cAM373 BEN31_12525 9b18f83b33c01cdda23ed33c345a9ff7 395 PIRSF PIRSF012509 1 395 5.6E-153 T 12-10-2018 IPR011426 CamS sex pheromone cAM373 BEN31_12525 9b18f83b33c01cdda23ed33c345a9ff7 395 Gene3D G3DSA:3.10.570.10 55 395 4.6E-132 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 Gene3D G3DSA:3.40.50.300 64 286 1.3E-43 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 PRINTS PR01874 DNA repair protein radA signature 322 345 4.1E-94 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 PRINTS PR01874 DNA repair protein radA signature 213 241 4.1E-94 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 PRINTS PR01874 DNA repair protein radA signature 248 274 4.1E-94 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 PRINTS PR01874 DNA repair protein radA signature 10 34 4.1E-94 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 PRINTS PR01874 DNA repair protein radA signature 82 110 4.1E-94 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 PRINTS PR01874 DNA repair protein radA signature 124 141 4.1E-94 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 PRINTS PR01874 DNA repair protein radA signature 174 198 4.1E-94 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 Pfam PF13481 AAA domain 67 222 1.9E-15 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 Gene3D G3DSA:3.30.230.10 287 457 4.0E-20 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 SUPERFAMILY SSF52540 68 293 5.01E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 45.204 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.9E-223 T 12-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 366 430 8.3E-10 T 12-10-2018 BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 SMART SM00382 90 244 3.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15185 769e179d2dfc863e09016012018e4bd4 459 SUPERFAMILY SSF54211 255 456 2.62E-42 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 250 7.9E-89 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 SUPERFAMILY SSF88659 109 184 6.1E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 249 2.5E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 PIRSF PIRSF000770 3 255 3.5E-37 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 PRINTS PR00046 Major sigma-70 factor signature 235 246 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 PRINTS PR00046 Major sigma-70 factor signature 220 235 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 PRINTS PR00046 Major sigma-70 factor signature 203 215 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 PRINTS PR00046 Major sigma-70 factor signature 85 93 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 PRINTS PR00046 Major sigma-70 factor signature 61 74 2.6E-11 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 SUPERFAMILY SSF88946 12 105 2.22E-34 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 Pfam PF04542 Sigma-70 region 2 37 104 8.4E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 Pfam PF04545 Sigma-70, region 4 199 246 9.5E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 Gene3D G3DSA:1.10.10.10 179 254 8.2E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 SUPERFAMILY SSF88659 171 250 6.92E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 249 2.8E-114 T 12-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 Gene3D G3DSA:1.10.10.10 105 160 6.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 Pfam PF04539 Sigma-70 region 3 115 183 3.7E-14 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BEN31_05565 61f5d3df29978241a8a0cb1814772379 255 Gene3D G3DSA:1.10.601.10 2 104 2.7E-29 T 12-10-2018 BEN31_07065 1c5be1498428dcffaa8421b03a47df59 258 Pfam PF01380 SIS domain 122 221 9.0E-14 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_07065 1c5be1498428dcffaa8421b03a47df59 258 Gene3D G3DSA:3.40.50.10490 92 258 1.4E-30 T 12-10-2018 BEN31_07065 1c5be1498428dcffaa8421b03a47df59 258 Gene3D G3DSA:1.10.10.10 6 79 3.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07065 1c5be1498428dcffaa8421b03a47df59 258 SUPERFAMILY SSF53697 96 256 1.09E-29 T 12-10-2018 BEN31_07065 1c5be1498428dcffaa8421b03a47df59 258 Pfam PF01418 Helix-turn-helix domain, rpiR family 12 75 3.5E-16 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BEN31_07065 1c5be1498428dcffaa8421b03a47df59 258 SUPERFAMILY SSF46689 6 75 5.38E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 Gene3D G3DSA:1.10.10.1330 75 184 4.7E-27 T 12-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 429 9.4E-128 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 PIRSF PIRSF000774 1 432 1.9E-119 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 Gene3D G3DSA:1.10.10.60 371 429 1.1E-21 T 12-10-2018 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 Pfam PF04552 Sigma-54, DNA binding domain 272 430 1.5E-56 T 12-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 Pfam PF04963 Sigma-54 factor, core binding domain 73 257 2.1E-51 T 12-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 PRINTS PR00045 Sigma-54 factor signature 346 357 8.4E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 PRINTS PR00045 Sigma-54 factor signature 142 159 8.4E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 PRINTS PR00045 Sigma-54 factor signature 330 342 8.4E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 PRINTS PR00045 Sigma-54 factor signature 405 423 8.4E-26 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 410 417 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.0E-13 T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_00550 405a050b276da5d71ff9b8610e696c18 432 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 318 337 - T 12-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 BEN31_08760 74d9d76a8057f1947de6446bbdb0391e 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 2.0E-73 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BEN31_08760 74d9d76a8057f1947de6446bbdb0391e 143 Gene3D G3DSA:2.40.330.20 1 141 5.7E-55 T 12-10-2018 IPR038619 MraZ superfamily BEN31_08760 74d9d76a8057f1947de6446bbdb0391e 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 1.9E-64 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BEN31_08760 74d9d76a8057f1947de6446bbdb0391e 143 SUPERFAMILY SSF89447 1 136 1.67E-53 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN31_08760 74d9d76a8057f1947de6446bbdb0391e 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 60.434 T 12-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 BEN31_08760 74d9d76a8057f1947de6446bbdb0391e 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 9.5E-24 T 12-10-2018 IPR020603 MraZ domain BEN31_08760 74d9d76a8057f1947de6446bbdb0391e 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 1.4E-26 T 12-10-2018 IPR020603 MraZ domain BEN31_17855 75912114734d4d3195946e8045e14d65 925 Gene3D G3DSA:3.40.50.10810 451 665 1.3E-69 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BEN31_17855 75912114734d4d3195946e8045e14d65 925 Gene3D G3DSA:1.20.120.850 688 912 1.8E-86 T 12-10-2018 BEN31_17855 75912114734d4d3195946e8045e14d65 925 Pfam PF12419 SNF2 Helicase protein 266 392 1.8E-35 T 12-10-2018 IPR022138 Helicase SWF/SNF-related BEN31_17855 75912114734d4d3195946e8045e14d65 925 SUPERFAMILY SSF52540 669 920 2.49E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17855 75912114734d4d3195946e8045e14d65 925 SMART SM00490 780 863 1.4E-21 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_17855 75912114734d4d3195946e8045e14d65 925 SMART SM00487 446 633 2.1E-34 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_17855 75912114734d4d3195946e8045e14d65 925 SUPERFAMILY SSF52540 426 664 1.55E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17855 75912114734d4d3195946e8045e14d65 925 Pfam PF00271 Helicase conserved C-terminal domain 753 863 2.0E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_17855 75912114734d4d3195946e8045e14d65 925 Gene3D G3DSA:3.40.50.300 674 877 1.8E-86 T 12-10-2018 BEN31_17855 75912114734d4d3195946e8045e14d65 925 Pfam PF00176 SNF2 family N-terminal domain 444 734 3.4E-59 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BEN31_03650 1090785a142cefdd282320f316746e63 517 Pfam PF08502 LeuA allosteric (dimerisation) domain 368 500 1.3E-36 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_03650 1090785a142cefdd282320f316746e63 517 Gene3D G3DSA:3.20.20.70 1 275 3.3E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_03650 1090785a142cefdd282320f316746e63 517 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 510 42.643 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_03650 1090785a142cefdd282320f316746e63 517 Gene3D G3DSA:1.10.238.260 279 390 2.7E-39 T 12-10-2018 BEN31_03650 1090785a142cefdd282320f316746e63 517 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_03650 1090785a142cefdd282320f316746e63 517 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 12-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_03650 1090785a142cefdd282320f316746e63 517 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 498 2.2E-240 T 12-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_03650 1090785a142cefdd282320f316746e63 517 SMART SM00917 368 501 1.1E-35 T 12-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_03650 1090785a142cefdd282320f316746e63 517 SUPERFAMILY SSF51569 2 290 3.79E-95 T 12-10-2018 BEN31_03650 1090785a142cefdd282320f316746e63 517 SUPERFAMILY SSF110921 396 500 1.83E-19 T 12-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 BEN31_03650 1090785a142cefdd282320f316746e63 517 Gene3D G3DSA:3.30.160.270 391 501 5.6E-11 T 12-10-2018 BEN31_03650 1090785a142cefdd282320f316746e63 517 Pfam PF00682 HMGL-like 3 272 3.3E-94 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 SUPERFAMILY SSF52743 22 287 8.64E-88 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 87 97 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 Gene3D G3DSA:3.40.50.200 3 307 3.4E-112 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 Pfam PF00082 Subtilase family 41 287 3.9E-62 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 46 57 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 83 96 2.4E-23 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 243 259 2.4E-23 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 PRINTS PR00723 Subtilisin serine protease family (S8) signature 41 60 2.4E-23 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_09650 92e47477dbf9faba6b37c91e829bd148 319 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 244 254 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 SMART SM01134 73 232 1.3E-67 T 12-10-2018 BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 4.0E-15 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 SMART SM00420 6 58 1.3E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 9.8E-50 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 SUPERFAMILY SSF46785 5 76 3.41E-15 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 SUPERFAMILY SSF100950 74 231 1.02E-32 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.7E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_09110 6af7d733fb58f6e65e7f5bd9d4b7fbb8 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.7E-8 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_08490 85279c8c478afb66f3a976cd86fcc2a4 261 SUPERFAMILY SSF53800 2 242 7.52E-50 T 12-10-2018 BEN31_08490 85279c8c478afb66f3a976cd86fcc2a4 261 Pfam PF01903 CbiX 10 114 5.3E-27 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 BEN31_08490 85279c8c478afb66f3a976cd86fcc2a4 261 Pfam PF01903 CbiX 134 234 4.1E-20 T 12-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 BEN31_08490 85279c8c478afb66f3a976cd86fcc2a4 261 Gene3D G3DSA:3.40.50.1400 1 121 1.7E-26 T 12-10-2018 BEN31_08490 85279c8c478afb66f3a976cd86fcc2a4 261 Gene3D G3DSA:3.40.50.1400 124 245 4.5E-20 T 12-10-2018 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 2 288 8.9E-168 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 Gene3D G3DSA:3.30.930.10 1 204 3.7E-106 T 12-10-2018 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 3.7E-147 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 Gene3D G3DSA:1.20.58.180 205 286 1.5E-36 T 12-10-2018 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 SUPERFAMILY SSF55681 1 280 6.21E-131 T 12-10-2018 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.7E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.7E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.7E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.7E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.7E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.7E-67 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04670 70f112f1d82f0725db411b472d1374c7 295 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 57.655 T 12-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_15055 300be1388443908a0a0d5ec88366eb5f 319 Pfam PF12697 Alpha/beta hydrolase family 32 303 2.3E-12 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_15055 300be1388443908a0a0d5ec88366eb5f 319 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 108 122 2.4E-9 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN31_15055 300be1388443908a0a0d5ec88366eb5f 319 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 32 40 2.4E-9 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN31_15055 300be1388443908a0a0d5ec88366eb5f 319 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 60 71 2.4E-9 T 12-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 BEN31_15055 300be1388443908a0a0d5ec88366eb5f 319 SUPERFAMILY SSF53474 11 305 2.64E-38 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_15055 300be1388443908a0a0d5ec88366eb5f 319 Gene3D G3DSA:3.40.50.1820 8 311 3.1E-40 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_17590 155ec2f34791a5096d1b6dbac0d32b30 415 Gene3D G3DSA:3.90.1150.10 6 389 3.2E-188 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_17590 155ec2f34791a5096d1b6dbac0d32b30 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.372 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN31_17590 155ec2f34791a5096d1b6dbac0d32b30 415 Gene3D G3DSA:3.40.640.10 33 283 3.2E-188 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_17590 155ec2f34791a5096d1b6dbac0d32b30 415 Pfam PF00464 Serine hydroxymethyltransferase 5 380 7.5E-182 T 12-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN31_17590 155ec2f34791a5096d1b6dbac0d32b30 415 PIRSF PIRSF000412 1 414 1.4E-172 T 12-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN31_17590 155ec2f34791a5096d1b6dbac0d32b30 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 12-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 BEN31_17590 155ec2f34791a5096d1b6dbac0d32b30 415 SUPERFAMILY SSF53383 2 413 5.84E-182 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_15860 8dc000e86d553a71f273898c610e7f17 95 Pfam PF01250 Ribosomal protein S6 3 92 2.4E-29 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15860 8dc000e86d553a71f273898c610e7f17 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.9E-35 T 12-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15860 8dc000e86d553a71f273898c610e7f17 95 SUPERFAMILY SSF54995 1 93 6.67E-34 T 12-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15860 8dc000e86d553a71f273898c610e7f17 95 Gene3D G3DSA:3.30.70.60 1 95 5.5E-36 T 12-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 BEN31_15860 8dc000e86d553a71f273898c610e7f17 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 23.073 T 12-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN31_15860 8dc000e86d553a71f273898c610e7f17 95 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 12-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN31_12585 adc3212833eef905a78a42dd8376f55f 229 Gene3D G3DSA:3.40.1080.10 1 218 1.2E-73 T 12-10-2018 BEN31_12585 adc3212833eef905a78a42dd8376f55f 229 Pfam PF01144 Coenzyme A transferase 7 215 4.1E-65 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN31_12585 adc3212833eef905a78a42dd8376f55f 229 SMART SM00882 5 216 4.4E-73 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN31_12585 adc3212833eef905a78a42dd8376f55f 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 217 8.6E-64 T 12-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 BEN31_12585 adc3212833eef905a78a42dd8376f55f 229 SUPERFAMILY SSF100950 3 220 1.67E-73 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_12585 adc3212833eef905a78a42dd8376f55f 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 12-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 BEN31_12040 0cd196c29325ec721fe08c48cea16f74 71 Hamap MF_00829 UPF0435 protein . 4 71 18.881 T 12-10-2018 IPR009507 Protein of unknown function UPF0435 BEN31_12040 0cd196c29325ec721fe08c48cea16f74 71 Pfam PF06569 Protein of unknown function (DUF1128) 1 71 9.7E-32 T 12-10-2018 IPR009507 Protein of unknown function UPF0435 BEN31_03930 55365dc964303c45732120f7a83dc02d 88 Pfam PF02699 Preprotein translocase subunit 7 82 2.4E-30 T 12-10-2018 IPR003849 Preprotein translocase YajC BEN31_03930 55365dc964303c45732120f7a83dc02d 88 SMART SM01323 3 85 4.1E-41 T 12-10-2018 IPR003849 Preprotein translocase YajC BEN31_03930 55365dc964303c45732120f7a83dc02d 88 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 5 84 4.2E-32 T 12-10-2018 IPR003849 Preprotein translocase YajC BEN31_03930 55365dc964303c45732120f7a83dc02d 88 PRINTS PR01853 Bacterial YajC preprotein translocase signature 43 61 3.4E-14 T 12-10-2018 IPR003849 Preprotein translocase YajC BEN31_03930 55365dc964303c45732120f7a83dc02d 88 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 3.4E-14 T 12-10-2018 IPR003849 Preprotein translocase YajC BEN31_05290 9d5a4481eed6c54558ca121a02752b93 139 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 3 130 1.7E-35 T 12-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 BEN31_05290 9d5a4481eed6c54558ca121a02752b93 139 SUPERFAMILY SSF54593 2 132 8.01E-22 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_05290 9d5a4481eed6c54558ca121a02752b93 139 Gene3D G3DSA:3.10.180.10 1 130 4.4E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_05290 9d5a4481eed6c54558ca121a02752b93 139 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.0E-20 T 12-10-2018 BEN31_07860 1316ae2f1d4674371016f499366681da 408 Gene3D G3DSA:1.20.1250.20 4 399 2.4E-65 T 12-10-2018 BEN31_07860 1316ae2f1d4674371016f499366681da 408 Pfam PF07690 Major Facilitator Superfamily 19 282 1.1E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_07860 1316ae2f1d4674371016f499366681da 408 SUPERFAMILY SSF103473 8 400 3.66E-69 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_07860 1316ae2f1d4674371016f499366681da 408 PRINTS PR01035 Tetracycline resistance protein signature 341 364 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_07860 1316ae2f1d4674371016f499366681da 408 PRINTS PR01035 Tetracycline resistance protein signature 20 36 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_07860 1316ae2f1d4674371016f499366681da 408 PRINTS PR01035 Tetracycline resistance protein signature 169 189 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_07860 1316ae2f1d4674371016f499366681da 408 PRINTS PR01035 Tetracycline resistance protein signature 306 326 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_07860 1316ae2f1d4674371016f499366681da 408 PRINTS PR01035 Tetracycline resistance protein signature 141 163 4.9E-9 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_07715 e21d5d50db4c81725cad51e0d3992365 382 Gene3D G3DSA:1.25.40.10 1 380 5.9E-116 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_07715 e21d5d50db4c81725cad51e0d3992365 382 SUPERFAMILY SSF48452 100 210 3.54E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_07715 e21d5d50db4c81725cad51e0d3992365 382 Pfam PF13374 Tetratricopeptide repeat 224 256 5.5E-5 T 12-10-2018 BEN31_07715 e21d5d50db4c81725cad51e0d3992365 382 SMART SM00028 139 172 19.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_07715 e21d5d50db4c81725cad51e0d3992365 382 SMART SM00028 224 257 0.0021 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_07715 e21d5d50db4c81725cad51e0d3992365 382 SUPERFAMILY SSF48452 188 291 1.36E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_16340 0f8bb956afbf68597deb2edbd337d2a6 350 SUPERFAMILY SSF46689 270 342 4.48E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_16340 0f8bb956afbf68597deb2edbd337d2a6 350 Pfam PF13556 PucR C-terminal helix-turn-helix domain 308 344 1.8E-12 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_16340 0f8bb956afbf68597deb2edbd337d2a6 350 Pfam PF05651 Putative sugar diacid recognition 4 137 8.9E-49 T 12-10-2018 IPR008599 Putative sugar diacid recognition BEN31_16340 0f8bb956afbf68597deb2edbd337d2a6 350 Gene3D G3DSA:1.10.10.2840 245 346 2.0E-14 T 12-10-2018 BEN31_02910 a2b8b41c880a2be2eef7d98c5182c0b3 107 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 6 104 3.7E-35 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 BEN31_02910 a2b8b41c880a2be2eef7d98c5182c0b3 107 Pfam PF11009 Protein of unknown function (DUF2847) 6 103 3.1E-34 T 12-10-2018 IPR022551 Protein of unknown function DUF2847 BEN31_02910 a2b8b41c880a2be2eef7d98c5182c0b3 107 SUPERFAMILY SSF52833 4 104 1.44E-8 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_02910 a2b8b41c880a2be2eef7d98c5182c0b3 107 Gene3D G3DSA:3.40.30.10 2 106 4.1E-35 T 12-10-2018 BEN31_02935 0e268849b7ab9da84009ddc0f40e5137 210 SUPERFAMILY SSF55729 31 119 1.98E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_02935 0e268849b7ab9da84009ddc0f40e5137 210 Gene3D G3DSA:3.40.630.30 2 210 2.7E-86 T 12-10-2018 BEN31_02935 0e268849b7ab9da84009ddc0f40e5137 210 PIRSF PIRSF021278 2 210 3.8E-86 T 12-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 BEN31_02935 0e268849b7ab9da84009ddc0f40e5137 210 Pfam PF00583 Acetyltransferase (GNAT) family 47 118 1.7E-4 T 12-10-2018 IPR000182 GNAT domain BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 SUPERFAMILY SSF53335 4 275 8.32E-90 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 Pfam PF01564 Spermine/spermidine synthase domain 59 237 8.6E-71 T 12-10-2018 BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 TIGRFAM TIGR00417 speE: spermidine synthase 5 270 3.1E-125 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 4 276 41.834 T 12-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 80 93 - T 12-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 Gene3D G3DSA:3.40.50.150 54 275 6.5E-76 T 12-10-2018 BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 Pfam PF17284 Spermidine synthase tetramerisation domain 4 56 9.6E-22 T 12-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN31_17380 76b79792ecb99fd8b3e78cf80ec1d511 276 Gene3D G3DSA:2.30.140.10 2 53 3.0E-26 T 12-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 BEN31_06560 1732db80f76ed3a5541b77cafed04430 116 SUPERFAMILY SSF89442 1 115 1.44E-51 T 12-10-2018 IPR036492 Hypothetical protein YojF superfamily BEN31_06560 1732db80f76ed3a5541b77cafed04430 116 Gene3D G3DSA:2.70.180.10 1 116 1.1E-49 T 12-10-2018 IPR036492 Hypothetical protein YojF superfamily BEN31_06560 1732db80f76ed3a5541b77cafed04430 116 Pfam PF08830 Protein of unknown function (DUF1806) 3 114 2.8E-50 T 12-10-2018 IPR014934 Protein of unknown function DUF1806 BEN31_10750 3fb19df00d9deae7ebb686bf03847369 252 SUPERFAMILY SSF52540 2 227 1.47E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10750 3fb19df00d9deae7ebb686bf03847369 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_10750 3fb19df00d9deae7ebb686bf03847369 252 Gene3D G3DSA:3.40.50.300 1 247 1.0E-63 T 12-10-2018 BEN31_10750 3fb19df00d9deae7ebb686bf03847369 252 Pfam PF00005 ABC transporter 17 164 8.7E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_10750 3fb19df00d9deae7ebb686bf03847369 252 SMART SM00382 26 213 3.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Gene3D G3DSA:2.40.30.10 201 301 2.5E-34 T 12-10-2018 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Gene3D G3DSA:3.40.50.300 4 200 1.1E-66 T 12-10-2018 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 SUPERFAMILY SSF50447 153 301 8.25E-33 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 141 1.5E-22 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 601 3.7E-291 T 12-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Gene3D G3DSA:2.40.50.250 485 601 2.1E-129 T 12-10-2018 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Gene3D G3DSA:3.30.70.240 391 484 2.1E-129 T 12-10-2018 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 197 4.6E-57 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Pfam PF03144 Elongation factor Tu domain 2 221 291 1.7E-12 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Pfam PF14492 Elongation Factor G, domain II 330 382 1.7E-6 T 12-10-2018 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 SMART SM00838 397 485 2.2E-4 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 SUPERFAMILY SSF52540 3 209 1.7E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.6E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Pfam PF00679 Elongation factor G C-terminus 399 479 1.7E-24 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 SUPERFAMILY SSF54980 304 389 1.22E-15 T 12-10-2018 IPR035647 EF-G domain III/V-like BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 Gene3D G3DSA:3.30.70.870 308 592 2.1E-129 T 12-10-2018 BEN31_08950 62d5a7b44a69405650ca30c643bff3dd 612 SUPERFAMILY SSF54980 400 515 4.08E-29 T 12-10-2018 IPR035647 EF-G domain III/V-like BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 Gene3D G3DSA:3.90.650.10 146 323 7.9E-43 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 Gene3D G3DSA:3.30.1330.10 1 145 1.2E-41 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 323 27.552 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 SUPERFAMILY SSF55326 2 139 1.55E-32 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 152 306 1.3E-10 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 PIRSF PIRSF005303 1 323 5.5E-94 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 139 3.5E-21 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 323 6.6E-105 T 12-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 BEN31_12945 ed560749c9ed08e80c6dbe77f709376f 325 SUPERFAMILY SSF56042 145 308 7.33E-28 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 SUPERFAMILY SSF55326 405 565 8.11E-57 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 SUPERFAMILY SSF56042 204 430 4.64E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 357 3.8E-32 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Pfam PF02769 AIR synthase related protein, C-terminal domain 575 708 4.3E-16 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 SUPERFAMILY SSF56042 572 739 1.17E-36 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Gene3D G3DSA:3.90.650.10 35 362 5.7E-136 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 743 329.123 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 PIRSF PIRSF001587 8 742 0.0 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Gene3D G3DSA:3.30.1330.10 392 565 1.5E-62 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Gene3D G3DSA:3.90.650.10 570 741 9.6E-39 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 738 0.0 T 12-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 SUPERFAMILY SSF55326 18 201 7.92E-52 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Gene3D G3DSA:3.30.1330.10 49 197 5.7E-136 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 1.3E-25 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BEN31_12635 8b9bad546a68ed652b49d4d90040bfa1 743 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 3.0E-25 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BEN31_15200 9ef78739290881cc0a6104f5aa2c368a 185 PIRSF PIRSF015034 1 185 1.5E-70 T 12-10-2018 IPR025542 YacH protein BEN31_15200 9ef78739290881cc0a6104f5aa2c368a 185 SUPERFAMILY SSF46600 143 181 6.54E-7 T 12-10-2018 IPR036876 UVR domain superfamily BEN31_15200 9ef78739290881cc0a6104f5aa2c368a 185 Pfam PF02151 UvrB/uvrC motif 144 176 1.0E-7 T 12-10-2018 IPR001943 UVR domain GO:0005515 BEN31_18345 3d0b014c907d0b4988d5040838a0379e 187 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 128 182 1.7E-29 T 12-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal BEN31_18345 3d0b014c907d0b4988d5040838a0379e 187 Gene3D G3DSA:3.30.505.50 140 186 3.3E-27 T 12-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily BEN31_18345 3d0b014c907d0b4988d5040838a0379e 187 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 3.9E-29 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BEN31_18345 3d0b014c907d0b4988d5040838a0379e 187 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 186 24.857 T 12-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid BEN31_18345 3d0b014c907d0b4988d5040838a0379e 187 Gene3D G3DSA:3.30.160.100 1 109 1.5E-29 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like BEN31_18345 3d0b014c907d0b4988d5040838a0379e 187 SUPERFAMILY SSF69754 2 108 1.26E-31 T 12-10-2018 IPR036567 Ribosome hibernation promotion factor-like BEN31_18345 3d0b014c907d0b4988d5040838a0379e 187 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 6.8E-35 T 12-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 BEN31_03655 642fad088768fd21c87edb9fc7d3874b 365 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 49.58 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BEN31_03655 642fad088768fd21c87edb9fc7d3874b 365 Gene3D G3DSA:3.40.718.10 2 365 8.9E-153 T 12-10-2018 BEN31_03655 642fad088768fd21c87edb9fc7d3874b 365 SMART SM01329 4 349 4.5E-197 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_03655 642fad088768fd21c87edb9fc7d3874b 365 SUPERFAMILY SSF53659 4 352 1.6E-121 T 12-10-2018 BEN31_03655 642fad088768fd21c87edb9fc7d3874b 365 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BEN31_03655 642fad088768fd21c87edb9fc7d3874b 365 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 353 3.4E-141 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_03655 642fad088768fd21c87edb9fc7d3874b 365 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 351 1.1E-164 T 12-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 4.8E-36 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Gene3D G3DSA:3.30.1370.100 489 582 1.5E-67 T 12-10-2018 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 SUPERFAMILY SSF55874 2 213 6.68E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Gene3D G3DSA:2.30.42.20 448 631 1.5E-67 T 12-10-2018 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Gene3D G3DSA:3.30.565.10 1 212 1.4E-62 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 SUPERFAMILY SSF118116 443 631 4.05E-56 T 12-10-2018 IPR037198 MutL, C-terminal domain superfamily BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 5.9E-100 T 12-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 12-10-2018 IPR014762 DNA mismatch repair, conserved site BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 SMART SM00853 447 589 2.7E-55 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 SUPERFAMILY SSF54211 190 326 4.93E-36 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Pfam PF08676 MutL C terminal dimerisation domain 448 589 9.0E-48 T 12-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 113 5.3E-8 T 12-10-2018 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 SMART SM01340 208 326 1.6E-51 T 12-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Gene3D G3DSA:3.30.230.10 213 325 1.8E-31 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_07745 70ab694e9f87b7bec732ae46cd037792 633 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 629 27.598 T 12-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 BEN31_07520 4a222e849405a51201ab970ad985c156 283 Pfam PF05368 NmrA-like family 4 217 1.0E-20 T 12-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 BEN31_07520 4a222e849405a51201ab970ad985c156 283 Gene3D G3DSA:3.90.25.10 137 267 6.2E-86 T 12-10-2018 BEN31_07520 4a222e849405a51201ab970ad985c156 283 Gene3D G3DSA:3.40.50.720 4 266 6.2E-86 T 12-10-2018 BEN31_07520 4a222e849405a51201ab970ad985c156 283 SUPERFAMILY SSF51735 3 233 2.95E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 ProSitePatterns PS00819 Dps protein family signature 2. 53 67 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 Gene3D G3DSA:1.20.1260.10 1 145 7.6E-55 T 12-10-2018 IPR012347 Ferritin-like BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 Pfam PF00210 Ferritin-like domain 9 144 3.3E-33 T 12-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 SUPERFAMILY SSF47240 3 145 2.12E-47 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 1.2E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 1.2E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 27 43 1.2E-14 T 12-10-2018 IPR002177 DNA-binding protein Dps BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 PIRSF PIRSF005900 1 145 7.8E-48 T 12-10-2018 IPR002177 DNA-binding protein Dps BEN31_02520 9eed136c64696329ecc5ac72582101c2 145 ProSitePatterns PS00818 Dps protein family signature 1. 27 43 - T 12-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 254 4.1E-99 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 Hamap MF_00258 Glutamate racemase [murI]. 3 256 41.092 T 12-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 12-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 215 7.5E-40 T 12-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 12-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 SUPERFAMILY SSF53681 109 257 3.43E-38 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 Gene3D G3DSA:3.40.50.1860 95 207 2.6E-97 T 12-10-2018 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 SUPERFAMILY SSF53681 4 107 6.21E-36 T 12-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_03555 054fa0c96300fd0b3292574d08e4a7b3 271 Gene3D G3DSA:3.40.50.1860 5 254 2.6E-97 T 12-10-2018 BEN31_11285 8b90bc855d72ca9fed4e11f5b7448a05 302 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 19 300 2.4E-80 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_11285 8b90bc855d72ca9fed4e11f5b7448a05 302 Pfam PF00849 RNA pseudouridylate synthase 91 243 5.6E-34 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_11285 8b90bc855d72ca9fed4e11f5b7448a05 302 SUPERFAMILY SSF55120 75 298 2.24E-66 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_11285 8b90bc855d72ca9fed4e11f5b7448a05 302 Gene3D G3DSA:3.30.2350.10 84 302 3.9E-66 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.300.30 2179 2283 1.4E-29 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF56801 53 649 3.66E-96 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SMART SM00823 Phosphopantetheine attachment site 2293 2361 0.077 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SMART SM00823 Phosphopantetheine attachment site 1237 1306 0.049 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF52777 1325 1504 1.67E-51 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.559.10 2363 2543 1.4E-45 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF00550 Phosphopantetheine attachment site 1240 1302 2.5E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF00550 Phosphopantetheine attachment site 2296 2356 9.6E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF08659 KR domain 908 1080 3.7E-37 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1261 1276 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF51735 667 891 2.56E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:1.10.1200.10 2291 2362 1.7E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF47336 1230 1303 8.9E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.559.30 3014 3266 3.3E-130 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF47336 2289 2357 6.15E-14 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF52777 2833 3012 2.33E-40 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2317 2332 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 908 1096 5.7E-20 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1810 2208 1.1E-119 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF52777 1512 1772 6.89E-62 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.40.50.12780 84 539 6.5E-126 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.559.10 1324 1698 5.2E-151 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:2.30.38.10 3299 3374 5.3E-6 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2675 2823 6.1E-41 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.300.30 540 647 4.3E-32 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF52777 3013 3253 1.22E-53 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF00501 AMP-binding enzyme 1789 2184 2.2E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF00501 AMP-binding enzyme 105 545 3.2E-68 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF13193 AMP-binding enzyme C-terminal domain 2192 2265 1.0E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF52777 2559 2799 1.11E-26 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1930 1941 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.559.10 2833 3201 3.3E-130 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.40.50.720 661 1162 7.7E-79 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF52777 2369 2571 1.22E-28 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF00668 Condensation domain 2373 2802 4.5E-67 T 12-10-2018 IPR001242 Condensation domain BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF00668 Condensation domain 1321 1769 7.2E-122 T 12-10-2018 IPR001242 Condensation domain BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Pfam PF00668 Condensation domain 2829 3269 1.2E-105 T 12-10-2018 IPR001242 Condensation domain BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF51735 907 1140 3.39E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.40.50.12780 1779 2178 1.4E-128 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:1.10.1200.10 1220 1312 1.0E-23 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.559.30 2544 2803 1.0E-59 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 SUPERFAMILY SSF56801 1748 2305 8.24E-141 T 12-10-2018 BEN31_13890 dc42411b2e1e05bd0a2316eb2983510f 3376 Gene3D G3DSA:3.30.559.30 1508 1754 5.2E-151 T 12-10-2018 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:2.40.270.10 981 1047 4.7E-25 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:3.90.1100.10 389 592 7.4E-74 T 12-10-2018 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:2.40.270.10 752 790 4.2E-6 T 12-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.596 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:3.90.1800.10 1057 1110 1.1E-10 T 12-10-2018 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 370 410 5.3E-7 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 289 2.8E-28 T 12-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Pfam PF04563 RNA polymerase beta subunit 28 454 4.9E-30 T 12-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:2.40.50.150 791 930 2.2E-61 T 12-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1145 4.7E-27 T 12-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 896 0.0 T 12-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:3.90.1110.10 154 271 8.7E-9 T 12-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:3.90.1100.10 20 153 6.3E-53 T 12-10-2018 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:3.90.1100.10 605 671 5.2E-19 T 12-10-2018 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Gene3D G3DSA:2.40.50.100 672 751 1.2E-27 T 12-10-2018 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Pfam PF10385 RNA polymerase beta subunit external 1 domain 547 614 3.3E-25 T 12-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Pfam PF04565 RNA polymerase Rpb2, domain 3 469 537 3.5E-30 T 12-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 SUPERFAMILY SSF64484 13 1156 0.0 T 12-10-2018 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 Pfam PF00562 RNA polymerase Rpb2, domain 6 678 1069 3.6E-165 T 12-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15090 55197a9f4b1d5eaa32c28fa412595e44 1193 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 12-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Pfam PF02355 Protein export membrane protein 550 726 3.2E-66 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Pfam PF02355 Protein export membrane protein 240 405 9.1E-14 T 12-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Gene3D G3DSA:3.30.70.3400 33 121 7.6E-21 T 12-10-2018 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 419 33.733 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 PRINTS PR01755 Bacterial translocase SecF protein signature 473 488 1.2E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 PRINTS PR01755 Bacterial translocase SecF protein signature 631 649 1.2E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 PRINTS PR01755 Bacterial translocase SecF protein signature 666 681 1.2E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 PRINTS PR01755 Bacterial translocase SecF protein signature 583 597 1.2E-24 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 181 397 1.8E-57 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 553 715 4.6E-50 T 12-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Gene3D G3DSA:1.20.1640.10 551 742 7.3E-7 T 12-10-2018 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Gene3D G3DSA:1.20.1640.10 224 421 5.3E-14 T 12-10-2018 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 33 404 1.5E-115 T 12-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Pfam PF07549 SecD/SecF GG Motif 469 492 0.0063 T 12-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 SUPERFAMILY SSF82866 214 408 6.54E-41 T 12-10-2018 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 SUPERFAMILY SSF82866 552 731 7.85E-33 T 12-10-2018 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 475 718 3.0E-68 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BEN31_03955 9834f08ee6f7d2c497df178839fd768d 742 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 446 729 24.992 T 12-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 BEN31_14205 50bf57037e0b5c5f805f65197dd90d42 330 Gene3D G3DSA:3.20.20.30 2 330 5.2E-92 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_14205 50bf57037e0b5c5f805f65197dd90d42 330 SUPERFAMILY SSF51679 4 328 7.89E-69 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_14205 50bf57037e0b5c5f805f65197dd90d42 330 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 328 8.8E-116 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BEN31_14205 50bf57037e0b5c5f805f65197dd90d42 330 Pfam PF00296 Luciferase-like monooxygenase 12 297 4.3E-33 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 SUPERFAMILY SSF56059 83 349 8.13E-71 T 12-10-2018 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 Gene3D G3DSA:3.30.470.130 1 449 7.0E-199 T 12-10-2018 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 SMART SM00878 337 443 9.9E-70 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 1.0E-240 T 12-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 5.6E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 SUPERFAMILY SSF52440 1 113 6.76E-51 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 2.6E-43 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.0E-47 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_05125 ef6fdc7bf89a2d3d493642927ed0dd3e 449 SUPERFAMILY SSF51246 332 445 5.23E-47 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN31_17065 f933d4dd840bf93fe44498e8dde8d8e2 126 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 11 102 1.2E-32 T 12-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 BEN31_17065 f933d4dd840bf93fe44498e8dde8d8e2 126 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 92 3.4E-14 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BEN31_01500 75aa666532c8048650ea704855cf8625 298 PIRSF PIRSF005963 2 298 6.4E-135 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN31_01500 75aa666532c8048650ea704855cf8625 298 Gene3D G3DSA:3.20.20.70 20 268 2.7E-21 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_01500 75aa666532c8048650ea704855cf8625 298 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 3 45 2.6E-10 T 12-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN31_01500 75aa666532c8048650ea704855cf8625 298 SMART SM00729 57 265 3.7E-15 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_01500 75aa666532c8048650ea704855cf8625 298 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 293 1.5E-119 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN31_01500 75aa666532c8048650ea704855cf8625 298 Hamap MF_00206 Lipoyl synthase [lipA]. 1 295 147.955 T 12-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 BEN31_01500 75aa666532c8048650ea704855cf8625 298 Pfam PF04055 Radical SAM superfamily 64 224 1.5E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_01500 75aa666532c8048650ea704855cf8625 298 SUPERFAMILY SSF102114 20 287 4.58E-62 T 12-10-2018 BEN31_17165 93e71d09092fd3b62e50dfa6b6bc5425 123 Pfam PF04241 Protein of unknown function (DUF423) 18 105 1.4E-31 T 12-10-2018 IPR006696 Protein of unknown function DUF423 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Pfam PF00013 KH domain 557 614 4.9E-10 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SUPERFAMILY SSF50249 621 704 1.42E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SMART SM00322 553 618 2.2E-13 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Gene3D G3DSA:3.30.230.70 235 550 9.5E-120 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SUPERFAMILY SSF54211 7 144 5.57E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Gene3D G3DSA:3.30.1370.10 551 622 4.5E-21 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 1.1E-20 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Pfam PF01138 3' exoribonuclease family, domain 1 324 457 4.2E-18 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SUPERFAMILY SSF55666 451 548 3.93E-27 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 PIRSF PIRSF005499 2 705 1.1E-301 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Gene3D G3DSA:3.30.230.70 1 230 2.6E-85 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SMART SM00316 621 691 3.7E-24 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.867 T 12-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SUPERFAMILY SSF54211 292 488 5.57E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SUPERFAMILY SSF54791 556 641 2.43E-23 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 SUPERFAMILY SSF55666 145 235 7.72E-30 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 1.0E-16 T 12-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Pfam PF00575 S1 RNA binding domain 620 691 3.6E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Gene3D G3DSA:2.40.50.140 623 694 1.5E-24 T 12-10-2018 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 1.7E-16 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_07935 253c9d137e4cac900580caf0686b634c 705 Pfam PF03725 3' exoribonuclease family, domain 2 460 530 5.3E-7 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_14980 0f330000afbd93b594e093b87fb96ee7 61 Gene3D G3DSA:4.10.830.10 1 61 5.3E-30 T 12-10-2018 BEN31_14980 0f330000afbd93b594e093b87fb96ee7 61 SUPERFAMILY SSF57716 3 61 4.35E-22 T 12-10-2018 BEN31_14980 0f330000afbd93b594e093b87fb96ee7 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14980 0f330000afbd93b594e093b87fb96ee7 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.723 T 12-10-2018 IPR023053 Ribosomal protein S14, type Z BEN31_14980 0f330000afbd93b594e093b87fb96ee7 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 1.9E-24 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_06415 c6589ce547a0862d0ce1f95d862f3608 178 SUPERFAMILY SSF55068 3 168 4.71E-73 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN31_06415 c6589ce547a0862d0ce1f95d862f3608 178 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 36.793 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN31_06415 c6589ce547a0862d0ce1f95d862f3608 178 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 157 2.5E-66 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN31_06415 c6589ce547a0862d0ce1f95d862f3608 178 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 4.1E-62 T 12-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN31_06415 c6589ce547a0862d0ce1f95d862f3608 178 Gene3D G3DSA:3.30.1060.10 1 165 1.1E-67 T 12-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 Pfam PF00106 short chain dehydrogenase 3 192 1.8E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 Gene3D G3DSA:3.40.50.720 1 259 4.4E-59 T 12-10-2018 BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.8E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.8E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.8E-8 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 SUPERFAMILY SSF51735 2 254 3.56E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PIRSF PIRSF000126 1 261 2.7E-72 T 12-10-2018 BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04415 efe5c32ca9edd6cb97bba51b380cfa75 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.4E-21 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04020 60c99f69b0db62513e89e83ebe34164b 139 Pfam PF02082 Transcriptional regulator 1 82 6.3E-27 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_04020 60c99f69b0db62513e89e83ebe34164b 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BEN31_04020 60c99f69b0db62513e89e83ebe34164b 139 SUPERFAMILY SSF46785 2 125 3.27E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_04020 60c99f69b0db62513e89e83ebe34164b 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 124 2.8E-34 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_04020 60c99f69b0db62513e89e83ebe34164b 139 Gene3D G3DSA:1.10.10.10 1 139 7.5E-52 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16450 f0fdf2a7cb7513304bd5c758728ef6ce 445 PIRSF PIRSF006060 1 445 4.4E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_16450 f0fdf2a7cb7513304bd5c758728ef6ce 445 Pfam PF00324 Amino acid permease 18 418 5.0E-86 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_16450 f0fdf2a7cb7513304bd5c758728ef6ce 445 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_16450 f0fdf2a7cb7513304bd5c758728ef6ce 445 Gene3D G3DSA:1.20.1740.10 9 445 4.9E-50 T 12-10-2018 BEN31_04935 bb1f0cb15d156d05f7a391763e6dac10 356 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 12-10-2018 IPR001482 Type II/IV secretion system protein BEN31_04935 bb1f0cb15d156d05f7a391763e6dac10 356 SMART SM00382 136 259 4.0E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_04935 bb1f0cb15d156d05f7a391763e6dac10 356 SUPERFAMILY SSF52540 5 285 4.82E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04935 bb1f0cb15d156d05f7a391763e6dac10 356 Gene3D G3DSA:3.40.50.300 110 335 8.8E-64 T 12-10-2018 BEN31_04935 bb1f0cb15d156d05f7a391763e6dac10 356 Gene3D G3DSA:3.30.450.90 3 109 4.8E-30 T 12-10-2018 BEN31_04935 bb1f0cb15d156d05f7a391763e6dac10 356 Pfam PF00437 Type II/IV secretion system protein 13 274 2.7E-71 T 12-10-2018 IPR001482 Type II/IV secretion system protein BEN31_08935 2520b24730c193f8e3e7cc1c9b02b992 205 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 30 157 2.2E-16 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BEN31_08935 2520b24730c193f8e3e7cc1c9b02b992 205 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 9 159 3.3E-43 T 12-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 BEN31_03400 b295dd5424840d29ff659a319b75a9a7 73 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 21.691 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 BEN31_03400 b295dd5424840d29ff659a319b75a9a7 73 Pfam PF14098 Small, acid-soluble spore protein I 3 67 5.9E-29 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 BEN31_03400 b295dd5424840d29ff659a319b75a9a7 73 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 1.4E-31 T 12-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 301 318 - T 12-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 432 632 4.4E-21 T 12-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 Gene3D G3DSA:3.40.50.1700 417 636 5.2E-62 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 Gene3D G3DSA:3.20.20.300 27 416 1.0E-159 T 12-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 SUPERFAMILY SSF51445 20 431 5.69E-102 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 SUPERFAMILY SSF52279 432 632 1.96E-13 T 12-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 41 389 1.3E-116 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 PRINTS PR00133 Glycosyl hydrolase family 3 signature 135 154 5.2E-5 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 PRINTS PR00133 Glycosyl hydrolase family 3 signature 213 229 5.2E-5 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN31_14770 ac0b9e411bcfdb160cb60bb4615de8b8 639 PRINTS PR00133 Glycosyl hydrolase family 3 signature 301 319 5.2E-5 T 12-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 BEN31_13550 597647529b073f5041b6710996d7e26f 351 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 345 4.3E-84 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_13550 597647529b073f5041b6710996d7e26f 351 SMART SM01329 5 345 9.3E-162 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_13550 597647529b073f5041b6710996d7e26f 351 Gene3D G3DSA:3.40.718.10 1 351 1.7E-125 T 12-10-2018 BEN31_13550 597647529b073f5041b6710996d7e26f 351 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BEN31_13550 597647529b073f5041b6710996d7e26f 351 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 349 1.6E-183 T 12-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 BEN31_13550 597647529b073f5041b6710996d7e26f 351 SUPERFAMILY SSF53659 2 349 5.76E-112 T 12-10-2018 BEN31_01230 d783db92020360e14da7625db8096a2b 211 Pfam PF00072 Response regulator receiver domain 4 115 5.7E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01230 d783db92020360e14da7625db8096a2b 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01230 d783db92020360e14da7625db8096a2b 211 SUPERFAMILY SSF52172 1 119 2.28E-31 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_01230 d783db92020360e14da7625db8096a2b 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.8E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01230 d783db92020360e14da7625db8096a2b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01230 d783db92020360e14da7625db8096a2b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01230 d783db92020360e14da7625db8096a2b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01230 d783db92020360e14da7625db8096a2b 211 SUPERFAMILY SSF46894 144 210 2.04E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_01230 d783db92020360e14da7625db8096a2b 211 SMART SM00448 2 115 5.6E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01230 d783db92020360e14da7625db8096a2b 211 Gene3D G3DSA:3.40.50.12740 2 210 2.1E-70 T 12-10-2018 BEN31_01230 d783db92020360e14da7625db8096a2b 211 SMART SM00421 147 204 5.9E-29 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_09185 0ec09c0e5673d3c347fe32a1f0fd4696 180 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 180 1.1E-4 T 12-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_09185 0ec09c0e5673d3c347fe32a1f0fd4696 180 SUPERFAMILY SSF52833 6 179 1.67E-57 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_09185 0ec09c0e5673d3c347fe32a1f0fd4696 180 Gene3D G3DSA:3.40.30.10 1 180 1.5E-72 T 12-10-2018 BEN31_09185 0ec09c0e5673d3c347fe32a1f0fd4696 180 Pfam PF00578 AhpC/TSA family 6 141 2.0E-38 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_09185 0ec09c0e5673d3c347fe32a1f0fd4696 180 PIRSF PIRSF000239 1 180 1.0E-58 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 Pfam PF12708 Pectate lyase superfamily protein 54 108 2.8E-7 T 12-10-2018 IPR024535 Pectate lyase superfamily protein BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 SMART SM00710 303 324 3.8 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 SMART SM00710 269 290 0.56 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 SMART SM00710 244 268 690.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 SMART SM00710 356 385 1400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 SMART SM00710 397 418 1700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 ProSitePatterns PS00502 Polygalacturonase active site. 310 324 - T 12-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 SUPERFAMILY SSF51126 46 433 2.58E-92 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 Gene3D G3DSA:2.160.20.10 29 462 1.8E-141 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_01180 d0e76819b475bcabdcc4e3b2d8ff9a36 462 Pfam PF00295 Glycosyl hydrolases family 28 214 435 3.9E-27 T 12-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Pfam PF03979 Sigma-70 factor, region 1.1 17 85 1.3E-15 T 12-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 PRINTS PR00046 Major sigma-70 factor signature 188 196 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 PRINTS PR00046 Major sigma-70 factor signature 348 359 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 PRINTS PR00046 Major sigma-70 factor signature 164 177 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 PRINTS PR00046 Major sigma-70 factor signature 333 348 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 PRINTS PR00046 Major sigma-70 factor signature 312 324 2.8E-32 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Pfam PF04539 Sigma-70 region 3 219 295 4.1E-33 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Gene3D G3DSA:1.10.220.120 15 74 3.2E-9 T 12-10-2018 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Gene3D G3DSA:1.10.10.10 289 373 2.7E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Gene3D G3DSA:1.10.601.10 100 135 7.0E-11 T 12-10-2018 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Gene3D G3DSA:1.10.601.10 136 212 3.5E-51 T 12-10-2018 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 138 361 1.0E-39 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 164 177 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Gene3D G3DSA:1.10.10.10 213 288 3.9E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 SUPERFAMILY SSF88946 101 210 4.32E-53 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 SUPERFAMILY SSF88659 270 371 5.42E-30 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 SUPERFAMILY SSF88659 213 286 1.29E-23 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 333 359 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Pfam PF04542 Sigma-70 region 2 140 209 3.3E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 137 372 1.0E-125 T 12-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 9 373 33.987 T 12-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Pfam PF00140 Sigma-70 factor, region 1.2 102 135 5.2E-16 T 12-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_04700 3ef5902d2cade9a885dac5ca9b8d3de6 373 Pfam PF04545 Sigma-70, region 4 308 361 5.1E-20 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 PRINTS PR00906 SecA protein signature 393 406 1.2E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 PRINTS PR00906 SecA protein signature 61 85 1.2E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 PRINTS PR00906 SecA protein signature 115 125 1.2E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 PRINTS PR00906 SecA protein signature 356 373 1.2E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 PRINTS PR00906 SecA protein signature 168 188 1.2E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 PRINTS PR00906 SecA protein signature 99 113 1.2E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 PRINTS PR00906 SecA protein signature 319 341 1.2E-70 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 2.2E-242 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 SUPERFAMILY SSF52540 7 395 6.24E-83 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 SUPERFAMILY SSF52540 397 568 9.21E-53 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 12-10-2018 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 SUPERFAMILY SSF81767 225 348 2.49E-45 T 12-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Pfam PF02810 SEC-C motif 821 839 1.4E-7 T 12-10-2018 IPR004027 SEC-C motif BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 SUPERFAMILY SSF81886 571 829 2.09E-79 T 12-10-2018 IPR036266 SecA, Wing/Scaffold superfamily BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Gene3D G3DSA:3.40.50.300 15 396 0.0 T 12-10-2018 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 SMART SM00957 5 382 1.1E-279 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 SMART SM00958 226 338 2.1E-65 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Gene3D G3DSA:1.10.3060.10 571 773 0.0 T 12-10-2018 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Pfam PF07517 SecA DEAD-like domain 7 382 4.1E-127 T 12-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 ProSitePatterns PS01312 SecA family signature. 480 495 - T 12-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Gene3D G3DSA:1.10.1200.230 621 705 0.0 T 12-10-2018 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Gene3D G3DSA:3.10.450.50 774 840 3.7E-8 T 12-10-2018 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Pfam PF01043 SecA preprotein cross-linking domain 230 338 8.9E-41 T 12-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Pfam PF07516 SecA Wing and Scaffold domain 568 777 4.5E-64 T 12-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 781 19.592 T 12-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 BEN31_18350 b5d8f73f9ea0747bb757232087e9c154 841 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 12-10-2018 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 SUPERFAMILY SSF54791 208 304 7.03E-16 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 SUPERFAMILY SSF109604 316 467 1.03E-30 T 12-10-2018 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 SMART SM00471 332 438 3.9E-14 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 Gene3D G3DSA:3.30.1370.10 208 305 1.2E-8 T 12-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 Pfam PF01966 HD domain 337 428 1.8E-18 T 12-10-2018 IPR006674 HD domain BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 SMART SM00322 208 275 1.1E-6 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 Gene3D G3DSA:1.10.3210.10 319 473 1.3E-19 T 12-10-2018 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 Pfam PF00013 KH domain 213 267 3.4E-6 T 12-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 Pfam PF12072 Domain of unknown function (DUF3552) 7 205 2.7E-77 T 12-10-2018 IPR022711 Ribonuclease Y, N-terminal BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 TIGRFAM TIGR00277 HDIG: HDIG domain 332 409 3.0E-26 T 12-10-2018 IPR006675 HDIG domain BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 Hamap MF_00335 Ribonuclease Y [rny]. 5 520 25.84 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 BEN31_07795 b0436ec38766f860c1e4b47ec28539d9 520 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 8 520 1.7E-247 T 12-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 Gene3D G3DSA:3.30.230.40 90 194 2.4E-39 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 Gene3D G3DSA:3.30.230.40 1 89 1.7E-35 T 12-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 SUPERFAMILY SSF54211 2 86 4.93E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 41.204 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 SUPERFAMILY SSF54211 87 179 1.0E-34 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 8.2E-62 T 12-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN31_18580 14fbcd7914944ff0e68e86431c295c72 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 12-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 BEN31_10225 875c346c2f4d0f7d74473f08f77d9243 289 Pfam PF00849 RNA pseudouridylate synthase 81 233 1.4E-26 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_10225 875c346c2f4d0f7d74473f08f77d9243 289 Gene3D G3DSA:3.30.2350.10 74 289 1.5E-64 T 12-10-2018 BEN31_10225 875c346c2f4d0f7d74473f08f77d9243 289 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 124 138 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_10225 875c346c2f4d0f7d74473f08f77d9243 289 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 32 287 6.7E-71 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_10225 875c346c2f4d0f7d74473f08f77d9243 289 SUPERFAMILY SSF55120 66 285 9.12E-67 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 SUPERFAMILY SSF56327 151 309 4.04E-53 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 9.3E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 9.3E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 9.3E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 9.3E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 9.3E-31 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 Gene3D G3DSA:3.90.110.10 150 310 1.4E-61 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 PIRSF PIRSF000102 2 311 5.8E-105 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 Gene3D G3DSA:3.40.50.720 1 149 1.3E-60 T 12-10-2018 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 SUPERFAMILY SSF51735 7 147 3.6E-47 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 152 309 4.3E-28 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 6.1E-41 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 311 1.1E-170 T 12-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BEN31_03255 1f7a2cd951de444d765fe12accdf570d 312 Hamap MF_00487 Malate dehydrogenase [mdh]. 6 312 47.179 T 12-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 BEN31_13380 72c55026fa483023d78721f58cf37f74 159 Pfam PF03703 Bacterial PH domain 73 148 6.7E-17 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BEN31_04705 094790de30c0aad1cb49dbd2998a0d35 119 PIRSF PIRSF000025 1 119 2.2E-36 T 12-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 BEN31_04705 094790de30c0aad1cb49dbd2998a0d35 119 SUPERFAMILY SSF46626 6 117 2.4E-14 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN31_04705 094790de30c0aad1cb49dbd2998a0d35 119 Gene3D G3DSA:1.10.760.10 50 119 1.5E-22 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN31_04705 094790de30c0aad1cb49dbd2998a0d35 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 48 115 2.4E-11 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08575 2d1e73d82dc6204c8e3f2bbed69594cc 155 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN31_08575 2d1e73d82dc6204c8e3f2bbed69594cc 155 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN31_08575 2d1e73d82dc6204c8e3f2bbed69594cc 155 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 3.0E-18 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN31_08575 2d1e73d82dc6204c8e3f2bbed69594cc 155 TIGRFAM TIGR00077 lspA: signal peptidase II 2 151 4.3E-51 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN31_08575 2d1e73d82dc6204c8e3f2bbed69594cc 155 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 16.963 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN31_08575 2d1e73d82dc6204c8e3f2bbed69594cc 155 Pfam PF01252 Signal peptidase (SPase) II 6 144 3.1E-40 T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN31_08575 2d1e73d82dc6204c8e3f2bbed69594cc 155 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 12-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 Gene3D G3DSA:3.10.20.30 48 364 7.5E-159 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 1.9E-160 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 46.937 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 SUPERFAMILY SSF81271 282 363 3.71E-36 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.8E-36 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 3.7E-40 T 12-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 Gene3D G3DSA:1.10.150.300 113 200 7.5E-159 T 12-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 PIRSF PIRSF006641 1 366 5.3E-168 T 12-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 Pfam PF01926 50S ribosome-binding GTPase 5 126 1.6E-24 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 SUPERFAMILY SSF52540 3 304 4.5E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15855 df8eb294d4a8ec8f31b72c53b2b4fdfe 366 Gene3D G3DSA:3.40.50.300 4 281 7.5E-159 T 12-10-2018 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 SUPERFAMILY SSF53732 11 642 6.28E-224 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 Pfam PF00330 Aconitase family (aconitate hydratase) 81 577 1.1E-174 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 Gene3D G3DSA:3.30.499.20 12 380 1.5E-159 T 12-10-2018 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 ProSitePatterns PS01244 Aconitase family signature 2. 508 521 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 Gene3D G3DSA:1.10.1440.20 606 667 2.7E-23 T 12-10-2018 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 SUPERFAMILY SSF52016 646 905 1.37E-86 T 12-10-2018 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 Gene3D G3DSA:3.20.19.10 669 906 2.8E-102 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 ProSitePatterns PS00450 Aconitase family signature 1. 442 458 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 24 906 0.0 T 12-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 Gene3D G3DSA:3.30.499.10 381 605 9.0E-100 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 Pfam PF00694 Aconitase C-terminal domain 707 834 6.7E-45 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 508 521 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 300 313 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 380 394 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 286 299 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 210 223 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 446 457 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 153 166 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 177 185 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_07380 d1537e15fc5dd95b4ba7d6f0ab787fa1 909 PRINTS PR00415 Aconitase family signature 224 239 1.1E-40 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_05995 134c212c00467a6a738ff9cbbfded913 148 Pfam PF10673 Protein of unknown function (DUF2487) 9 145 4.5E-45 T 12-10-2018 IPR019615 Protein of unknown function DUF2487 BEN31_18130 8800452ddcad88182713a37c01f28432 238 SUPERFAMILY SSF53448 2 232 4.12E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_18130 8800452ddcad88182713a37c01f28432 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 232 1.6E-43 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN31_18130 8800452ddcad88182713a37c01f28432 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN31_18130 8800452ddcad88182713a37c01f28432 238 Gene3D G3DSA:3.90.550.10 1 238 4.3E-73 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_18130 8800452ddcad88182713a37c01f28432 238 Hamap MF_02068 Ribitol-5-phosphate cytidylyltransferase [tarI]. 1 234 46.125 T 12-10-2018 IPR034709 Ribitol-5-phosphate cytidylyltransferase GO:0047349 KEGG: 00040+2.7.7.40|KEGG: 00515+2.7.7.40|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7818|MetaCyc: PWY-7981 BEN31_18085 9ba3ffba297e98a401233aa054ce746f 129 Gene3D G3DSA:3.40.50.620 1 129 4.5E-44 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_18085 9ba3ffba297e98a401233aa054ce746f 129 Pfam PF01467 Cytidylyltransferase-like 5 124 1.9E-23 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_18085 9ba3ffba297e98a401233aa054ce746f 129 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 1.0E-67 T 12-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 BEN31_18085 9ba3ffba297e98a401233aa054ce746f 129 SUPERFAMILY SSF52374 1 126 1.39E-35 T 12-10-2018 BEN31_18085 9ba3ffba297e98a401233aa054ce746f 129 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 1.2E-21 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 SMART SM00436 126 216 4.4E-40 T 12-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 SMART SM00493 3 126 1.6E-18 T 12-10-2018 IPR006171 TOPRIM domain BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 12-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 Pfam PF01751 Toprim domain 5 134 7.5E-13 T 12-10-2018 IPR006171 TOPRIM domain BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 636 67.83 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 Gene3D G3DSA:1.10.460.10 160 591 2.4E-145 T 12-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 Gene3D G3DSA:2.70.20.10 210 475 2.4E-145 T 12-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 1.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 1.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 1.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 510 524 1.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.0E-27 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 727 2.5E-293 T 12-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 Pfam PF01131 DNA topoisomerase 152 581 2.4E-120 T 12-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 SUPERFAMILY SSF56712 3 597 6.54E-172 T 12-10-2018 IPR023405 DNA topoisomerase, type IA, core domain BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 Gene3D G3DSA:1.10.290.10 271 401 2.4E-145 T 12-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 SMART SM00437 262 547 5.8E-98 T 12-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 BEN31_13545 97aaf60ab0ee1bcb9da0420c421f6010 728 Gene3D G3DSA:3.40.50.140 4 154 8.7E-51 T 12-10-2018 BEN31_05930 45d2dc21b86f99377bbc623a8e478c6d 363 PIRSF PIRSF001455 3 362 8.0E-104 T 12-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN31_05930 45d2dc21b86f99377bbc623a8e478c6d 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 359 68.352 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN31_05930 45d2dc21b86f99377bbc623a8e478c6d 363 SUPERFAMILY SSF56796 7 357 3.27E-96 T 12-10-2018 BEN31_05930 45d2dc21b86f99377bbc623a8e478c6d 363 Pfam PF01761 3-dehydroquinate synthase 68 323 2.3E-96 T 12-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN31_05930 45d2dc21b86f99377bbc623a8e478c6d 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 351 2.3E-116 T 12-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 BEN31_05930 45d2dc21b86f99377bbc623a8e478c6d 363 Gene3D G3DSA:1.20.1090.10 173 360 7.3E-51 T 12-10-2018 BEN31_05930 45d2dc21b86f99377bbc623a8e478c6d 363 Gene3D G3DSA:3.40.50.1970 1 172 4.5E-63 T 12-10-2018 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 33.017 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 12-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 Gene3D G3DSA:2.30.30.790 3 115 1.7E-15 T 12-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 1.7E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 PIRSF PIRSF002191 1 115 2.7E-52 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 SUPERFAMILY SSF50104 2 114 1.7E-49 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN31_08285 5ebac637417504953ce4fae899d8ffb8 115 Pfam PF01245 Ribosomal protein L19 4 112 3.8E-54 T 12-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 Gene3D G3DSA:3.30.450.20 72 185 1.4E-34 T 12-10-2018 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 Gene3D G3DSA:1.10.8.500 304 356 2.2E-9 T 12-10-2018 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 SMART SM00283 386 661 6.6E-86 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 Gene3D G3DSA:3.30.450.20 60 267 1.4E-34 T 12-10-2018 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 SUPERFAMILY SSF103190 126 194 1.33E-9 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 SMART SM00304 305 357 3.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 Gene3D G3DSA:1.10.287.950 385 661 1.9E-65 T 12-10-2018 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 SMART SM00319 33 154 4.1E-8 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 Pfam PF02743 Cache domain 55 267 5.0E-23 T 12-10-2018 IPR033479 Double Cache domain 1 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 Pfam PF00672 HAMP domain 311 354 4.1E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 SUPERFAMILY SSF58104 325 661 4.19E-68 T 12-10-2018 BEN31_02000 f901d7ab2b2c8f7f6a9b7ce13a7476b6 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 433 615 2.0E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 678 26.962 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 678 2.8E-268 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 1.3E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 1.3E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 1.3E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.3E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.3E-37 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 Pfam PF05746 DALR anticodon binding domain 576 671 1.6E-6 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 543 9.8E-213 T 12-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 BEN31_04675 d306b09b7c16553785b525b845e87d8b 681 SUPERFAMILY SSF109604 338 491 5.1E-21 T 12-10-2018 BEN31_11755 2ad4fa83b81b1fc9e96c7a0918caf421 298 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 2.3E-103 T 12-10-2018 IPR010099 Epimerase family protein SDR39U1 BEN31_11755 2ad4fa83b81b1fc9e96c7a0918caf421 298 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 5.7E-18 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN31_11755 2ad4fa83b81b1fc9e96c7a0918caf421 298 Gene3D G3DSA:3.40.50.720 1 286 1.7E-70 T 12-10-2018 BEN31_11755 2ad4fa83b81b1fc9e96c7a0918caf421 298 Pfam PF08338 Domain of unknown function (DUF1731) 250 292 7.6E-13 T 12-10-2018 IPR013549 Domain of unknown function DUF1731 BEN31_11755 2ad4fa83b81b1fc9e96c7a0918caf421 298 SUPERFAMILY SSF51735 2 264 9.0E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.9E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 9.0E-89 T 12-10-2018 BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 PIRSF PIRSF000094 2 258 1.5E-103 T 12-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 Gene3D G3DSA:3.40.50.720 1 257 1.2E-61 T 12-10-2018 BEN31_10175 7e7a0dc143e83faa407263aa04c1aff7 258 SUPERFAMILY SSF51735 6 255 2.29E-67 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 SUPERFAMILY SSF48295 342 446 9.68E-37 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Pfam PF00308 Bacterial dnaA protein 111 327 1.4E-107 T 12-10-2018 IPR013317 Chromosomal replication initiator protein DnaA BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 SMART SM00382 143 271 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Gene3D G3DSA:1.10.8.60 277 345 3.2E-30 T 12-10-2018 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 ProSitePatterns PS01008 DnaA protein signature. 405 424 - T 12-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 446 35.258 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 144 164 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 176 190 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 242 269 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 405 424 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 208 222 7.8E-54 T 12-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Gene3D G3DSA:3.40.50.300 95 275 3.7E-55 T 12-10-2018 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 SMART SM00760 355 424 1.4E-41 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 445 1.4E-189 T 12-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Gene3D G3DSA:1.10.1750.10 346 446 1.0E-35 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Gene3D G3DSA:3.30.300.180 1 82 1.4E-32 T 12-10-2018 IPR038454 DnaA, N-terminal domain superfamily BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 SUPERFAMILY SSF52540 111 323 4.07E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 356 424 8.4E-31 T 12-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 BEN31_15770 0aa18b17043f7d51be685c347b559c9d 446 Pfam PF11638 DnaA N-terminal domain 7 66 7.3E-18 T 12-10-2018 IPR024633 DnaA N-terminal domain BEN31_07880 9b144dbea10f05fe142865d6e1f6f5fe 242 Gene3D G3DSA:3.90.226.10 40 219 6.5E-31 T 12-10-2018 BEN31_07880 9b144dbea10f05fe142865d6e1f6f5fe 242 SUPERFAMILY SSF52096 27 225 5.89E-39 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_07880 9b144dbea10f05fe142865d6e1f6f5fe 242 Pfam PF00574 Clp protease 41 217 6.3E-34 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Gene3D G3DSA:1.10.110.30 145 238 3.4E-28 T 12-10-2018 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Gene3D G3DSA:3.30.460.10 2 144 2.0E-53 T 12-10-2018 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 SUPERFAMILY SSF81891 140 392 3.79E-48 T 12-10-2018 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 169 228 6.4E-14 T 12-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 248 389 6.3E-30 T 12-10-2018 IPR032810 CCA-adding enzyme, C-terminal BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 SUPERFAMILY SSF81301 5 139 1.53E-44 T 12-10-2018 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Gene3D G3DSA:1.10.246.80 338 400 1.6E-17 T 12-10-2018 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Hamap MF_01263 CCA-adding enzyme [cca]. 2 394 38.302 T 12-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Pfam PF01743 Poly A polymerase head domain 22 141 2.9E-38 T 12-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 BEN31_06055 4be911e45b78f5bc07c01af7316fcffa 400 Gene3D G3DSA:1.20.58.560 241 337 1.2E-7 T 12-10-2018 BEN31_04855 49e7724d7671bf39cbe027f1c335fca6 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.981 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04855 49e7724d7671bf39cbe027f1c335fca6 49 Pfam PF00471 Ribosomal protein L33 3 49 6.3E-22 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04855 49e7724d7671bf39cbe027f1c335fca6 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 12-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04855 49e7724d7671bf39cbe027f1c335fca6 49 Gene3D G3DSA:2.20.28.120 1 49 2.4E-23 T 12-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04855 49e7724d7671bf39cbe027f1c335fca6 49 SUPERFAMILY SSF57829 1 49 1.76E-18 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BEN31_04855 49e7724d7671bf39cbe027f1c335fca6 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 1.3E-19 T 12-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_09780 88fd8d4a837e7e00cb601a1ae53b1554 336 Pfam PF00005 ABC transporter 25 183 2.1E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09780 88fd8d4a837e7e00cb601a1ae53b1554 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 298 2.0E-19 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_09780 88fd8d4a837e7e00cb601a1ae53b1554 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 318 2.4E-26 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_09780 88fd8d4a837e7e00cb601a1ae53b1554 336 Gene3D G3DSA:3.40.50.300 1 333 1.4E-100 T 12-10-2018 BEN31_09780 88fd8d4a837e7e00cb601a1ae53b1554 336 SMART SM00382 33 233 1.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_09780 88fd8d4a837e7e00cb601a1ae53b1554 336 SUPERFAMILY SSF52540 35 326 1.55E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09780 88fd8d4a837e7e00cb601a1ae53b1554 336 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_13640 aac190033b11c7ed158ac24f9741216d 263 Pfam PF07286 Protein of unknown function (DUF1445) 112 254 9.2E-68 T 12-10-2018 IPR009906 D-glutamate cyclase BEN31_13640 aac190033b11c7ed158ac24f9741216d 263 Gene3D G3DSA:3.40.1640.10 17 250 8.6E-97 T 12-10-2018 BEN31_13640 aac190033b11c7ed158ac24f9741216d 263 PIRSF PIRSF029755 1 263 1.7E-125 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 BEN31_13640 aac190033b11c7ed158ac24f9741216d 263 Gene3D G3DSA:3.30.2040.10 122 234 8.6E-97 T 12-10-2018 BEN31_13640 aac190033b11c7ed158ac24f9741216d 263 Hamap MF_01830 Putative hydro-lyase . 8 262 54.452 T 12-10-2018 IPR016938 Uncharacterised protein family UPF0317 BEN31_13640 aac190033b11c7ed158ac24f9741216d 263 SUPERFAMILY SSF160920 5 255 5.1E-114 T 12-10-2018 IPR038021 Putative hydro-lyase BEN31_11190 6fff5d54668c205552d1f7fe841c006f 143 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 4.2E-39 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_11190 6fff5d54668c205552d1f7fe841c006f 143 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BEN31_11190 6fff5d54668c205552d1f7fe841c006f 143 Gene3D G3DSA:1.10.10.10 1 141 1.6E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11190 6fff5d54668c205552d1f7fe841c006f 143 Pfam PF02082 Transcriptional regulator 1 81 5.5E-25 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_11190 6fff5d54668c205552d1f7fe841c006f 143 SUPERFAMILY SSF46785 2 135 1.08E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 SUPERFAMILY SSF47781 463 550 4.22E-26 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Pfam PF16921 Tex protein YqgF-like domain 319 444 3.1E-56 T 12-10-2018 IPR032639 Tex protein, YqgF-like domain BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Pfam PF12836 Helix-hairpin-helix motif 484 548 3.7E-25 T 12-10-2018 BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Pfam PF09371 Tex-like protein N-terminal domain 11 193 3.8E-69 T 12-10-2018 IPR018974 Tex-like protein, N-terminal BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 SUPERFAMILY SSF53098 315 462 5.39E-51 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Gene3D G3DSA:1.10.150.310 492 626 1.9E-44 T 12-10-2018 BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Gene3D G3DSA:1.10.3500.10 114 491 8.9E-158 T 12-10-2018 IPR023323 Tex-like domain superfamily BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 SUPERFAMILY SSF50249 631 717 8.95E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 SMART SM00732 319 417 1.0E-36 T 12-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 SUPERFAMILY SSF158832 8 314 1.29E-112 T 12-10-2018 BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 SUPERFAMILY SSF47781 554 628 2.67E-15 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Gene3D G3DSA:3.30.420.140 318 444 8.9E-158 T 12-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Gene3D G3DSA:1.10.10.650 4 111 6.8E-38 T 12-10-2018 IPR023319 Tex-like protein, HTH domain superfamily BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Gene3D G3DSA:2.40.50.140 631 717 7.7E-25 T 12-10-2018 BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 SMART SM00316 645 716 4.6E-23 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_13300 81696074d51d4ac75bf06cc63648a0b6 719 Pfam PF00575 S1 RNA binding domain 645 715 9.8E-18 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 SUPERFAMILY SSF47323 644 917 3.36E-73 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 SUPERFAMILY SSF52374 1 640 3.49E-153 T 12-10-2018 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 553 562 2.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 2.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 519 532 2.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 2.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 391 406 2.3E-32 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 Gene3D G3DSA:1.10.730.20 632 918 1.0E-89 T 12-10-2018 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 833 0.0 T 12-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 Gene3D G3DSA:3.90.740.10 194 398 2.3E-262 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 Gene3D G3DSA:3.40.50.620 24 621 2.3E-262 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 630 1.1E-220 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 20.461 T 12-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 Pfam PF08264 Anticodon-binding domain of tRNA 677 831 8.5E-31 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BEN31_08585 a5f849683674587f3c6075e2b73fe28a 921 SUPERFAMILY SSF50677 202 393 9.1E-64 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 Gene3D G3DSA:3.30.2090.10 181 320 3.0E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 Gene3D G3DSA:3.30.2090.10 756 843 5.3E-13 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 Pfam PF00873 AcrB/AcrD/AcrF family 304 1061 1.0E-163 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 Pfam PF00873 AcrB/AcrD/AcrF family 4 244 2.0E-41 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 SUPERFAMILY SSF82714 184 246 1.24E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 SUPERFAMILY SSF82693 41 132 1.15E-20 T 12-10-2018 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 SUPERFAMILY SSF82714 758 841 1.05E-14 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 SUPERFAMILY SSF82693 134 374 1.36E-14 T 12-10-2018 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 Gene3D G3DSA:3.30.70.1430 41 136 2.0E-20 T 12-10-2018 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 Gene3D G3DSA:1.20.1640.10 359 559 1.6E-56 T 12-10-2018 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 Gene3D G3DSA:1.20.1640.10 863 1074 8.3E-56 T 12-10-2018 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 SUPERFAMILY SSF82866 342 543 1.31E-44 T 12-10-2018 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.3E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 PRINTS PR00702 Acriflavin resistance protein family signature 492 515 3.3E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.3E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 PRINTS PR00702 Acriflavin resistance protein family signature 517 540 3.3E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 PRINTS PR00702 Acriflavin resistance protein family signature 594 611 3.3E-24 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_12410 fbcaa24b68246b2d1b91fa65fefdf193 1074 SUPERFAMILY SSF82866 844 1067 3.53E-46 T 12-10-2018 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Pfam PF02310 B12 binding domain 711 803 1.6E-19 T 12-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Gene3D G3DSA:3.20.20.20 319 614 5.0E-102 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 894 1141 2.7E-55 T 12-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 SUPERFAMILY SSF47644 622 704 2.48E-21 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Pfam PF02574 Homocysteine S-methyltransferase 13 302 3.5E-71 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Gene3D G3DSA:1.10.1240.10 615 702 5.5E-25 T 12-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Pfam PF00809 Pterin binding enzyme 338 571 4.4E-38 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 SUPERFAMILY SSF51717 335 597 2.49E-77 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Gene3D G3DSA:1.10.288.10 892 950 2.2E-63 T 12-10-2018 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 PIRSF PIRSF000381 1 1142 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 SUPERFAMILY SSF52242 706 835 9.68E-39 T 12-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 SMART SM01018 622 705 1.5E-35 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 SUPERFAMILY SSF56507 862 1141 3.79E-88 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Pfam PF02607 B12 binding domain 625 698 4.2E-21 T 12-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Gene3D G3DSA:3.10.196.10 877 1141 2.2E-63 T 12-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 TIGRFAM TIGR02082 metH: methionine synthase 8 1141 0.0 T 12-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Gene3D G3DSA:3.20.20.330 1 318 1.2E-105 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 SUPERFAMILY SSF82282 2 377 1.31E-108 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN31_10530 e83183a722eddd2f44ffb032cc0e9d9f 1142 Gene3D G3DSA:3.40.50.280 707 847 3.3E-45 T 12-10-2018 BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 150 158 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 3 494 45.91 T 12-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 SMART SM00487 22 219 3.2E-66 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 Gene3D G3DSA:3.40.50.300 2 208 2.3E-77 T 12-10-2018 BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 Pfam PF00271 Helicase conserved C-terminal domain 228 336 2.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 Pfam PF00270 DEAD/DEAH box helicase 27 192 3.7E-50 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 Gene3D G3DSA:3.40.50.300 210 437 3.1E-54 T 12-10-2018 BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 SUPERFAMILY SSF52540 71 358 2.93E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_13385 95999ad7dc3349d828e3fabc47680043 496 SMART SM00490 255 336 1.7E-35 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_08495 f7d693a51f7f5c6f56fb785b68fda0f5 251 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 238 1.1E-103 T 12-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BEN31_08495 f7d693a51f7f5c6f56fb785b68fda0f5 251 Gene3D G3DSA:3.40.1010.10 1 117 6.7E-49 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BEN31_08495 f7d693a51f7f5c6f56fb785b68fda0f5 251 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BEN31_08495 f7d693a51f7f5c6f56fb785b68fda0f5 251 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 12-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BEN31_08495 f7d693a51f7f5c6f56fb785b68fda0f5 251 SUPERFAMILY SSF53790 1 247 1.28E-87 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BEN31_08495 f7d693a51f7f5c6f56fb785b68fda0f5 251 Gene3D G3DSA:3.30.950.10 118 251 8.5E-47 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BEN31_08495 f7d693a51f7f5c6f56fb785b68fda0f5 251 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 214 6.0E-52 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 PIRSF PIRSF006250 1 277 1.5E-100 T 12-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 272 1.9E-63 T 12-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 Gene3D G3DSA:3.90.1170.20 12 272 3.4E-101 T 12-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 SUPERFAMILY SSF54675 4 107 2.27E-25 T 12-10-2018 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 274 7.5E-100 T 12-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 SUPERFAMILY SSF51690 108 273 4.71E-59 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 Gene3D G3DSA:3.20.20.70 122 264 3.4E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_03865 e6a2e3763b8b36a1b3cc090144f78a21 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 105 2.9E-23 T 12-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Pfam PF00874 PRD domain 316 403 2.5E-20 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Pfam PF00874 PRD domain 208 294 1.1E-18 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 416 472 3.2E-5 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Pfam PF08279 HTH domain 92 147 2.6E-6 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Pfam PF08279 HTH domain 6 62 9.4E-8 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Gene3D G3DSA:3.40.930.10 533 684 1.7E-13 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Gene3D G3DSA:1.10.1790.10 310 406 1.2E-19 T 12-10-2018 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Gene3D G3DSA:1.10.1790.10 202 295 1.0E-19 T 12-10-2018 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 SUPERFAMILY SSF46785 88 140 7.16E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Gene3D G3DSA:3.40.50.2300 414 500 4.8E-13 T 12-10-2018 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 SUPERFAMILY SSF63520 201 294 5.75E-21 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 SUPERFAMILY SSF63520 308 405 2.49E-19 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Gene3D G3DSA:1.10.10.10 1 62 3.1E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Gene3D G3DSA:1.10.10.10 72 150 1.9E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 SUPERFAMILY SSF55804 536 683 1.07E-17 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 544 682 2.6E-12 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_13605 3fbb94795275319bfdce534681fa6b66 695 SUPERFAMILY SSF52794 414 488 2.77E-11 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 198.727 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 SUPERFAMILY SSF53067 1 194 1.29E-72 T 12-10-2018 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 PIRSF PIRSF000722 1 394 6.6E-156 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 12-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 Gene3D G3DSA:3.30.420.40 2 194 4.2E-76 T 12-10-2018 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 Gene3D G3DSA:3.30.420.40 195 394 1.1E-83 T 12-10-2018 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 PRINTS PR00471 Acetate kinase family signature 299 312 9.3E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 PRINTS PR00471 Acetate kinase family signature 202 223 9.3E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 PRINTS PR00471 Acetate kinase family signature 4 15 9.3E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 PRINTS PR00471 Acetate kinase family signature 321 337 9.3E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 PRINTS PR00471 Acetate kinase family signature 172 185 9.3E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 PRINTS PR00471 Acetate kinase family signature 375 387 9.3E-48 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 TIGRFAM TIGR00016 ackA: acetate kinase 2 393 1.2E-180 T 12-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 SUPERFAMILY SSF53067 157 393 3.89E-95 T 12-10-2018 BEN31_03140 d2218bce60f10b7afd9429aee05606ab 394 Pfam PF00871 Acetokinase family 3 388 3.0E-175 T 12-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 Pfam PF06418 CTP synthase N-terminus 3 267 3.6E-131 T 12-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 Pfam PF00117 Glutamine amidotransferase class-I 302 525 1.9E-58 T 12-10-2018 IPR017926 Glutamine amidotransferase BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 53.016 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 Gene3D G3DSA:3.40.50.300 1 286 1.4E-135 T 12-10-2018 BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 SUPERFAMILY SSF52317 289 530 4.28E-84 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 SUPERFAMILY SSF52540 1 269 1.37E-127 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 527 2.5E-268 T 12-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 BEN31_17475 5e96fccf2fbd1bed5a3416fc96370222 535 Gene3D G3DSA:3.40.50.880 287 535 2.7E-102 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_15920 b6a84c902f77ccb465d7a90590106315 308 SMART SM01131 181 307 1.7E-56 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_15920 b6a84c902f77ccb465d7a90590106315 308 Gene3D G3DSA:3.10.310.20 190 308 9.4E-40 T 12-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_15920 b6a84c902f77ccb465d7a90590106315 308 Pfam PF01368 DHH family 3 146 1.7E-31 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_15920 b6a84c902f77ccb465d7a90590106315 308 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 308 46.403 T 12-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_15920 b6a84c902f77ccb465d7a90590106315 308 Gene3D G3DSA:3.90.1640.10 1 188 6.3E-81 T 12-10-2018 BEN31_15920 b6a84c902f77ccb465d7a90590106315 308 Pfam PF02833 DHHA2 domain 183 306 2.8E-22 T 12-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_15920 b6a84c902f77ccb465d7a90590106315 308 SUPERFAMILY SSF64182 2 307 2.22E-84 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 5.2E-22 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 SUPERFAMILY SSF52172 1 133 3.13E-34 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 SMART SM00421 147 204 5.0E-26 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 Gene3D G3DSA:3.40.50.12740 1 208 1.4E-68 T 12-10-2018 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 SMART SM00448 1 114 3.4E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 SUPERFAMILY SSF46894 140 207 2.04E-21 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_11215 d7551c0366d212fb9b1b8feb3a8a378a 216 Pfam PF00072 Response regulator receiver domain 3 113 8.7E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 SMART SM00344 12 118 6.0E-41 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 SUPERFAMILY SSF46785 11 71 9.5E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 Gene3D G3DSA:3.30.70.920 64 158 6.2E-14 T 12-10-2018 BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 3.3E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 3.3E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 3.3E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 Gene3D G3DSA:1.10.10.10 9 63 2.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 SUPERFAMILY SSF54909 73 151 1.34E-11 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 Pfam PF01037 Lrp/AsnC ligand binding domain 79 148 7.5E-9 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN31_17880 3051e3c7135e7df02cb335d8b481f2f0 158 Pfam PF13404 AsnC-type helix-turn-helix domain 12 52 2.7E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_05460 c0f31fdb54ca9abc80d42fa881310c67 108 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 105 1.9E-24 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BEN31_05460 c0f31fdb54ca9abc80d42fa881310c67 108 SUPERFAMILY SSF89360 1 106 2.49E-24 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN31_05460 c0f31fdb54ca9abc80d42fa881310c67 108 Gene3D G3DSA:2.60.300.12 1 108 3.9E-7 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 535 664 2.2E-44 T 12-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Gene3D G3DSA:2.40.50.140 556 665 2.9E-35 T 12-10-2018 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 237 248 5.7E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.7E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.7E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 270 285 5.7E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.7E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 PRINTS PR01041 Methionyl-tRNA synthetase signature 362 373 5.7E-33 T 12-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Pfam PF09334 tRNA synthetases class I (M) 8 374 5.5E-121 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 SUPERFAMILY SSF52374 5 361 3.75E-115 T 12-10-2018 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Gene3D G3DSA:3.40.50.620 8 345 4.4E-154 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Gene3D G3DSA:2.170.220.10 119 239 4.4E-154 T 12-10-2018 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 SUPERFAMILY SSF50249 564 664 2.18E-32 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 SUPERFAMILY SSF47323 364 578 5.98E-47 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Hamap MF_01228 Methionine--tRNA ligase [metG]. 4 523 52.079 T 12-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Pfam PF01588 Putative tRNA binding domain 571 663 1.0E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Gene3D G3DSA:1.10.730.10 352 521 2.9E-53 T 12-10-2018 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 Pfam PF08264 Anticodon-binding domain of tRNA 399 534 2.0E-8 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BEN31_15515 3cb8359097746d5ba58dc0f9515cfb3b 665 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 524 5.3E-187 T 12-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 BEN31_18120 f225787832304a1591a2669a189f3ef1 293 Pfam PF00483 Nucleotidyl transferase 6 265 8.7E-34 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN31_18120 f225787832304a1591a2669a189f3ef1 293 SUPERFAMILY SSF53448 4 275 1.31E-67 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_18120 f225787832304a1591a2669a189f3ef1 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 2.3E-122 T 12-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 BEN31_18120 f225787832304a1591a2669a189f3ef1 293 Gene3D G3DSA:3.90.550.10 1 291 3.4E-93 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_03405 f0fd157d4b7ba6a75288eaede2b3efb8 247 SUPERFAMILY SSF55315 2 95 6.47E-24 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_03405 f0fd157d4b7ba6a75288eaede2b3efb8 247 Gene3D G3DSA:3.40.1280.10 99 247 2.3E-51 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN31_03405 f0fd157d4b7ba6a75288eaede2b3efb8 247 Gene3D G3DSA:3.30.1330.30 3 96 5.7E-26 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_03405 f0fd157d4b7ba6a75288eaede2b3efb8 247 SMART SM00967 31 98 3.3E-11 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN31_03405 f0fd157d4b7ba6a75288eaede2b3efb8 247 SUPERFAMILY SSF75217 95 246 3.07E-43 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN31_03405 f0fd157d4b7ba6a75288eaede2b3efb8 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 93 1.2E-7 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN31_03405 f0fd157d4b7ba6a75288eaede2b3efb8 247 Pfam PF00588 SpoU rRNA Methylase family 106 243 3.0E-37 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 SUPERFAMILY SSF52172 3 136 2.28E-34 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 SUPERFAMILY SSF46894 152 227 2.07E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 SMART SM00448 4 117 9.1E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 1.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 1.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 1.0E-14 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 Gene3D G3DSA:3.40.50.12740 4 226 6.2E-70 T 12-10-2018 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 220 7.9E-25 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 Pfam PF00072 Response regulator receiver domain 6 118 5.3E-32 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_18250 6471c5abe4c44d0ce3e0ae3f1774b8a5 229 SMART SM00421 163 220 9.7E-29 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_10125 a4be2cb16e20c55522270af87fa9ae72 85 Pfam PF14069 Stage VI sporulation protein F 6 77 1.8E-27 T 12-10-2018 IPR025942 Stage VI sporulation protein F BEN31_02860 88bbb92ad934cd3c19fc3432ea62a983 357 PIRSF PIRSF001123 2 356 1.1E-147 T 12-10-2018 IPR008007 Peptidase M42 BEN31_02860 88bbb92ad934cd3c19fc3432ea62a983 357 Gene3D G3DSA:3.40.630.10 11 339 2.5E-115 T 12-10-2018 BEN31_02860 88bbb92ad934cd3c19fc3432ea62a983 357 Gene3D G3DSA:2.40.30.40 75 162 2.5E-115 T 12-10-2018 IPR023367 Peptidase M42, domain 2 BEN31_02860 88bbb92ad934cd3c19fc3432ea62a983 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 1.4E-108 T 12-10-2018 IPR008007 Peptidase M42 BEN31_02860 88bbb92ad934cd3c19fc3432ea62a983 357 SUPERFAMILY SSF53187 4 351 3.49E-70 T 12-10-2018 BEN31_02860 88bbb92ad934cd3c19fc3432ea62a983 357 SUPERFAMILY SSF101821 71 180 7.48E-30 T 12-10-2018 BEN31_17005 534865e68c0806a378ffa79a9f2c2c09 229 Gene3D G3DSA:3.40.50.150 20 227 5.1E-54 T 12-10-2018 BEN31_17005 534865e68c0806a378ffa79a9f2c2c09 229 SUPERFAMILY SSF53335 14 191 9.75E-36 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_17005 534865e68c0806a378ffa79a9f2c2c09 229 Pfam PF13489 Methyltransferase domain 33 180 3.7E-20 T 12-10-2018 BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.3E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.0E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 SUPERFAMILY SSF51735 2 247 1.24E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 Gene3D G3DSA:3.40.50.720 1 251 8.4E-69 T 12-10-2018 BEN31_03160 de0eeb1332b2c7cc824af0a3e078f3e4 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 246 6.6E-50 T 12-10-2018 BEN31_07240 840d9a94c5bd65fb4ed45a91c879cc53 367 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 92 105 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BEN31_07240 840d9a94c5bd65fb4ed45a91c879cc53 367 SUPERFAMILY SSF53686 3 365 1.28E-87 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN31_07240 840d9a94c5bd65fb4ed45a91c879cc53 367 Gene3D G3DSA:3.40.50.1100 51 366 1.7E-94 T 12-10-2018 BEN31_07240 840d9a94c5bd65fb4ed45a91c879cc53 367 Gene3D G3DSA:3.40.50.1100 100 196 1.7E-94 T 12-10-2018 BEN31_07240 840d9a94c5bd65fb4ed45a91c879cc53 367 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 361 2.5E-64 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Pfam PF13184 NusA-like KH domain 229 296 1.3E-28 T 12-10-2018 IPR025249 KH domain, NusA-like GO:0003723 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 SMART SM00316 133 199 1.5E-11 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Pfam PF00575 S1 RNA binding domain 133 195 3.6E-12 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Gene3D G3DSA:3.30.300.20 198 276 1.4E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Gene3D G3DSA:3.30.300.20 277 371 8.5E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 SMART SM00322 300 370 0.62 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 SMART SM00322 229 292 0.7 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 SUPERFAMILY SSF69705 1 126 1.96E-44 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Gene3D G3DSA:3.30.1480.10 1 124 2.9E-51 T 12-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 SUPERFAMILY SSF54814 199 277 1.83E-30 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 SUPERFAMILY SSF50249 132 198 1.0E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Pfam PF08529 NusA N-terminal domain 4 123 3.5E-46 T 12-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 369 30.61 T 12-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 Gene3D G3DSA:2.40.50.140 136 197 6.9E-25 T 12-10-2018 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 3.8E-129 T 12-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 BEN31_07980 cbd29ea7afdeac67f3d777097c9cf1ad 371 SUPERFAMILY SSF54814 278 341 3.86E-16 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 PIRSF PIRSF000770 2 241 1.1E-93 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 4.2E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 Gene3D G3DSA:1.20.120.1810 20 125 1.0E-23 T 12-10-2018 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 PRINTS PR00046 Major sigma-70 factor signature 78 91 7.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 PRINTS PR00046 Major sigma-70 factor signature 197 212 7.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 PRINTS PR00046 Major sigma-70 factor signature 212 223 7.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 PRINTS PR00046 Major sigma-70 factor signature 176 188 7.9E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 5 228 1.2E-114 T 12-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 Gene3D G3DSA:1.10.10.10 154 234 1.6E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04430 d6eed0957039d83a4e3693309693a685 241 SUPERFAMILY SSF88946 10 120 7.59E-34 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 SUPERFAMILY SSF88659 139 225 4.36E-18 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_04430 d6eed0957039d83a4e3693309693a685 241 Pfam PF04545 Sigma-70, region 4 173 223 6.9E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 Pfam PF04542 Sigma-70 region 2 54 123 9.8E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_04430 d6eed0957039d83a4e3693309693a685 241 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_04870 745fa89682fe48827091f77d2e916f6e 67 SUPERFAMILY SSF158379 1 59 1.31E-21 T 12-10-2018 IPR023164 YqgQ-like superfamily BEN31_04870 745fa89682fe48827091f77d2e916f6e 67 Gene3D G3DSA:1.10.287.760 1 67 5.7E-25 T 12-10-2018 IPR023164 YqgQ-like superfamily BEN31_04870 745fa89682fe48827091f77d2e916f6e 67 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 59 3.0E-27 T 12-10-2018 IPR009256 Protein of unknown function DUF910 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 Gene3D G3DSA:2.70.70.10 472 631 8.2E-57 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 SUPERFAMILY SSF51261 477 630 1.29E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 SUPERFAMILY SSF55604 10 84 3.14E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 485 609 1.2E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 Pfam PF02378 Phosphotransferase system, EIIC 112 393 5.5E-28 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 Gene3D G3DSA:3.30.1360.60 2 80 7.3E-25 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 7 630 6.4E-198 T 12-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 Pfam PF00367 phosphotransferase system, EIIB 13 39 1.7E-11 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 486 606 1.6E-44 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_16205 5e8383682079ab8c2ad4e8a173deacad 632 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 548 560 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_10010 72a2abb623f4b2caaa0787388c5b9dfb 82 Pfam PF10852 Protein of unknown function (DUF2651) 6 76 8.0E-16 T 12-10-2018 IPR020258 Uncharacterised protein family YbeF BEN31_10010 72a2abb623f4b2caaa0787388c5b9dfb 82 ProDom PD060054 MEMBRANE SPANNING TRANSMEMBRANE YBEF 1 71 2.0E-6 T 12-10-2018 IPR020258 Uncharacterised protein family YbeF BEN31_04060 c754daf0941af35171ae413740987546 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 214 5.9E-19 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_04060 c754daf0941af35171ae413740987546 216 Gene3D G3DSA:1.10.3720.10 9 216 2.1E-49 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04060 c754daf0941af35171ae413740987546 216 SUPERFAMILY SSF161098 15 207 1.44E-41 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04060 c754daf0941af35171ae413740987546 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 5.8E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_11990 8d3436bebbddc9c40890824d44b947c7 220 Pfam PF00005 ABC transporter 17 157 5.1E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11990 8d3436bebbddc9c40890824d44b947c7 220 SMART SM00382 26 206 4.2E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_11990 8d3436bebbddc9c40890824d44b947c7 220 SUPERFAMILY SSF52540 2 207 1.62E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11990 8d3436bebbddc9c40890824d44b947c7 220 Gene3D G3DSA:3.40.50.300 1 220 1.8E-46 T 12-10-2018 BEN31_11990 8d3436bebbddc9c40890824d44b947c7 220 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_09460 071ad2549cab24de6eecb75de964a521 254 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 58 2.9E-21 T 12-10-2018 IPR025713 Motility protein B, N-terminal domain BEN31_09460 071ad2549cab24de6eecb75de964a521 254 SUPERFAMILY SSF103088 127 249 1.96E-29 T 12-10-2018 IPR036737 OmpA-like domain superfamily BEN31_09460 071ad2549cab24de6eecb75de964a521 254 Gene3D G3DSA:3.30.1330.60 66 253 9.1E-42 T 12-10-2018 IPR036737 OmpA-like domain superfamily BEN31_09460 071ad2549cab24de6eecb75de964a521 254 Pfam PF00691 OmpA family 140 240 1.2E-14 T 12-10-2018 IPR006665 OmpA-like domain BEN31_06725 6fb8d54d2854a88b39594b8f7537bf2f 201 Pfam PF13761 Domain of unknown function (DUF4166) 14 193 5.4E-53 T 12-10-2018 IPR025311 Domain of unknown function DUF4166 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 2.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.3E-21 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 Gene3D G3DSA:2.30.30.30 119 177 6.7E-24 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 Pfam PF00467 KOW motif 128 158 3.8E-8 T 12-10-2018 IPR005824 KOW BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 SMART SM00739 123 150 4.6E-6 T 12-10-2018 IPR005824 KOW BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 SUPERFAMILY SSF50104 121 177 3.46E-19 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 SUPERFAMILY SSF82679 2 114 1.28E-40 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 Pfam PF02357 Transcription termination factor nusG 3 109 7.2E-28 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 SMART SM00738 2 113 3.0E-53 T 12-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.2E-68 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 29.983 T 12-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 Gene3D G3DSA:3.30.70.940 1 118 7.1E-45 T 12-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 BEN31_15120 03b9c247a4963c517eb086c1f14a7230 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 12-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site BEN31_03610 cbfe58d4fdb5b773de65c84a00e798fb 78 SUPERFAMILY SSF47336 2 76 1.44E-14 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_03610 cbfe58d4fdb5b773de65c84a00e798fb 78 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 78 45.565 T 12-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 BEN31_03610 cbfe58d4fdb5b773de65c84a00e798fb 78 Gene3D G3DSA:1.10.1200.10 1 78 4.4E-24 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_03610 cbfe58d4fdb5b773de65c84a00e798fb 78 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 76 3.2E-36 T 12-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 BEN31_03610 cbfe58d4fdb5b773de65c84a00e798fb 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.7E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 Gene3D G3DSA:1.10.3660.10 185 299 5.8E-36 T 12-10-2018 BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 SUPERFAMILY SSF48179 178 286 7.03E-35 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 Pfam PF01842 ACT domain 301 350 1.9E-8 T 12-10-2018 IPR002912 ACT domain BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 Pfam PF02153 Prephenate dehydrogenase 20 279 8.6E-92 T 12-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 Gene3D G3DSA:3.30.70.260 300 363 2.3E-6 T 12-10-2018 BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 Gene3D G3DSA:3.40.50.720 3 183 9.8E-52 T 12-10-2018 BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 SUPERFAMILY SSF51735 8 173 9.24E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05975 703afea1f80fcd3dafb32ca412f2dfdc 371 SUPERFAMILY SSF55021 294 351 1.95E-8 T 12-10-2018 BEN31_10600 24172556037c8e20bdaa85a2d610bc21 491 Gene3D G3DSA:3.50.50.60 7 84 6.2E-18 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10600 24172556037c8e20bdaa85a2d610bc21 491 Gene3D G3DSA:3.90.660.50 85 146 6.2E-18 T 12-10-2018 BEN31_10600 24172556037c8e20bdaa85a2d610bc21 491 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 6 485 2.6E-116 T 12-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 BEN31_10600 24172556037c8e20bdaa85a2d610bc21 491 Pfam PF01593 Flavin containing amine oxidoreductase 12 476 5.9E-28 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BEN31_10600 24172556037c8e20bdaa85a2d610bc21 491 Gene3D G3DSA:3.50.50.60 197 325 2.8E-11 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10600 24172556037c8e20bdaa85a2d610bc21 491 SUPERFAMILY SSF51905 1 481 3.31E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_07685 e12f12e513a33be7999e9aadcca7a89b 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07685 e12f12e513a33be7999e9aadcca7a89b 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.7E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07685 e12f12e513a33be7999e9aadcca7a89b 180 SUPERFAMILY SSF46689 4 69 3.59E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_07685 e12f12e513a33be7999e9aadcca7a89b 180 SUPERFAMILY SSF48498 88 178 1.98E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_07685 e12f12e513a33be7999e9aadcca7a89b 180 Gene3D G3DSA:1.10.357.10 1 180 4.8E-46 T 12-10-2018 BEN31_07685 e12f12e513a33be7999e9aadcca7a89b 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 1.7E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 Gene3D G3DSA:3.30.70.660 107 243 7.0E-49 T 12-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 Gene3D G3DSA:3.30.70.580 1 106 7.2E-36 T 12-10-2018 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 PIRSF PIRSF001430 1 247 6.0E-84 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 SUPERFAMILY SSF55120 1 247 4.46E-87 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 35.966 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 Pfam PF01416 tRNA pseudouridine synthase 7 104 1.6E-11 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 Pfam PF01416 tRNA pseudouridine synthase 145 246 1.7E-31 T 12-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_14880 ba5c660f9825ba2c5567d2bd9783c8bb 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 240 7.9E-74 T 12-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 459 1.2E-131 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 Gene3D G3DSA:1.20.120.430 125 459 1.5E-108 T 12-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 SUPERFAMILY SSF52540 78 375 4.19E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 459 34.362 T 12-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 Pfam PF01926 50S ribosome-binding GTPase 225 336 2.0E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 124 5.3E-41 T 12-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 Gene3D G3DSA:3.40.50.300 222 387 1.5E-108 T 12-10-2018 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 Gene3D G3DSA:3.30.1360.120 1 124 1.2E-48 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 Pfam PF12631 MnmE helical domain 127 456 7.8E-60 T 12-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 PRINTS PR00449 Transforming protein P21 ras signature 262 284 6.3E-6 T 12-10-2018 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 PRINTS PR00449 Transforming protein P21 ras signature 222 243 6.3E-6 T 12-10-2018 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 PRINTS PR00449 Transforming protein P21 ras signature 326 339 6.3E-6 T 12-10-2018 BEN31_15795 d42a290c7909efe82df43f1673ed636a 459 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 371 2.7E-29 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_10205 892b4c85067afd9d3fe14cf4eeb592fa 205 Gene3D G3DSA:3.20.20.70 1 203 4.0E-56 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_10205 892b4c85067afd9d3fe14cf4eeb592fa 205 Pfam PF02581 Thiamine monophosphate synthase 4 179 3.3E-42 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_10205 892b4c85067afd9d3fe14cf4eeb592fa 205 SUPERFAMILY SSF51391 3 196 4.84E-47 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_04070 314a0168f9af8f0917d3162a4a4ccc81 269 Gene3D G3DSA:3.40.190.10 135 232 1.2E-81 T 12-10-2018 BEN31_04070 314a0168f9af8f0917d3162a4a4ccc81 269 SMART SM00079 47 269 1.0E-5 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BEN31_04070 314a0168f9af8f0917d3162a4a4ccc81 269 Gene3D G3DSA:3.40.190.10 48 266 1.2E-81 T 12-10-2018 BEN31_04070 314a0168f9af8f0917d3162a4a4ccc81 269 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 71 84 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site BEN31_04070 314a0168f9af8f0917d3162a4a4ccc81 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 268 1.5E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_04070 314a0168f9af8f0917d3162a4a4ccc81 269 SUPERFAMILY SSF53850 4 268 3.58E-68 T 12-10-2018 BEN31_04070 314a0168f9af8f0917d3162a4a4ccc81 269 SMART SM00062 47 269 7.9E-77 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 SUPERFAMILY SSF54814 2 105 6.28E-39 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 8.6E-40 T 12-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 Gene3D G3DSA:3.30.300.20 17 106 3.3E-33 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 Pfam PF07650 KH domain 37 109 1.7E-21 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 12-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 SMART SM00322 59 124 7.5E-9 T 12-10-2018 IPR004087 K Homology domain GO:0003676 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 Gene3D G3DSA:3.30.1140.32 107 207 6.7E-41 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.9E-96 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.485 T 12-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 BEN31_15015 5d41e758db23dafd48dbdb25cabe6854 218 SUPERFAMILY SSF54821 107 205 1.57E-38 T 12-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 752 6.7E-156 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 SUPERFAMILY SSF51726 6 380 1.57E-91 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 4 757 34.015 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 9 757 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 SUPERFAMILY SSF51726 398 756 4.32E-114 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 PIRSF PIRSF000382 3 762 0.0 T 12-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 6 310 2.4E-120 T 12-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 Gene3D G3DSA:3.20.20.210 8 523 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_09655 7c270128ed5df44fd885d2f4f543a0b7 762 Gene3D G3DSA:3.20.20.210 388 755 0.0 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_09905 49841943f6490202447f4100952352ac 256 Gene3D G3DSA:1.20.5.460 92 127 2.7E-15 T 12-10-2018 BEN31_09905 49841943f6490202447f4100952352ac 256 Gene3D G3DSA:3.30.70.2720 128 248 2.3E-39 T 12-10-2018 BEN31_09905 49841943f6490202447f4100952352ac 256 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 15 241 8.0E-89 T 12-10-2018 BEN31_09905 49841943f6490202447f4100952352ac 256 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 3 238 6.0E-94 T 12-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 PIRSF PIRSF000077 1 104 9.1E-43 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 Gene3D G3DSA:3.40.30.10 1 104 3.1E-36 T 12-10-2018 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 2.2E-39 T 12-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 SUPERFAMILY SSF52833 3 104 5.68E-37 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 Pfam PF00085 Thioredoxin 3 103 1.4E-30 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 PRINTS PR00421 Thioredoxin family signature 20 28 1.3E-8 T 12-10-2018 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 PRINTS PR00421 Thioredoxin family signature 68 79 1.3E-8 T 12-10-2018 BEN31_03485 45828455349abee09b1fb42b8dbee02e 104 PRINTS PR00421 Thioredoxin family signature 28 37 1.3E-8 T 12-10-2018 BEN31_06575 aa5b8ebade1b97473336bdcbe6f02ace 208 Hamap MF_00838 Diadenylate cyclase [dacB]. 15 201 33.911 T 12-10-2018 IPR034693 Diadenylate cyclase CdaS GO:0004016|GO:0006171 BEN31_06575 aa5b8ebade1b97473336bdcbe6f02ace 208 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 80 195 1.1E-39 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal BEN31_06575 aa5b8ebade1b97473336bdcbe6f02ace 208 SUPERFAMILY SSF143597 39 198 3.01E-46 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BEN31_06575 aa5b8ebade1b97473336bdcbe6f02ace 208 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 3 70 3.6E-26 T 12-10-2018 IPR019457 Uncharacterised domain YojJ, N-terminal BEN31_06575 aa5b8ebade1b97473336bdcbe6f02ace 208 Gene3D G3DSA:1.10.287.770 5 67 8.5E-11 T 12-10-2018 BEN31_06575 aa5b8ebade1b97473336bdcbe6f02ace 208 Gene3D G3DSA:3.40.1700.10 68 208 7.1E-48 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 SUPERFAMILY SSF53649 39 452 1.06E-120 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 Gene3D G3DSA:3.40.720.10 50 443 9.9E-139 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 SMART SM00098 47 454 1.5E-170 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 ProSitePatterns PS00123 Alkaline phosphatase active site. 99 107 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 PRINTS PR00113 Alkaline phosphatase signature 136 156 6.8E-40 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 PRINTS PR00113 Alkaline phosphatase signature 46 66 6.8E-40 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 PRINTS PR00113 Alkaline phosphatase signature 186 196 6.8E-40 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 PRINTS PR00113 Alkaline phosphatase signature 99 114 6.8E-40 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 PRINTS PR00113 Alkaline phosphatase signature 252 281 6.8E-40 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 Gene3D G3DSA:1.10.60.40 328 413 9.9E-139 T 12-10-2018 BEN31_11175 399e13e91f0abdcf5bb417c335bb5796 454 Pfam PF00245 Alkaline phosphatase 47 451 1.7E-123 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Gene3D G3DSA:3.30.565.10 4 223 9.2E-94 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 8 638 0.0 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 SUPERFAMILY SSF55874 8 220 1.14E-73 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 SUPERFAMILY SSF54211 225 395 1.04E-64 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Gene3D G3DSA:3.30.230.10 224 402 1.1E-75 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 SUPERFAMILY SSF56719 398 630 5.49E-93 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 5 638 98.248 T 12-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Gene3D G3DSA:3.40.50.670 403 638 3.9E-112 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 SMART SM00387 33 177 5.6E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 ProSitePatterns PS00177 DNA topoisomerase II signature. 426 434 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 SMART SM00433 37 631 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 568 627 8.3E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 115 129 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 490 506 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 72 85 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 528 540 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 508 525 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 37 52 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 424 438 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 272 285 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR00418 DNA topoisomerase II family signature 570 586 6.2E-74 T 12-10-2018 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Pfam PF01751 Toprim domain 423 534 1.0E-18 T 12-10-2018 IPR006171 TOPRIM domain BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Pfam PF00204 DNA gyrase B 225 394 4.2E-66 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 176 4.6E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 364 378 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 316 332 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 198 211 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 607 623 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 8 18 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 474 483 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 183 198 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 224 246 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 378 398 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_15745 b1e9bbb59ab9a7091e981e9c8467a15d 638 PRINTS PR01159 DNA gyrase subunit B signature 591 603 1.2E-78 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_06070 482fadb4e8771a46cc7163fb8b930a6c 288 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 277 5.3E-116 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BEN31_06070 482fadb4e8771a46cc7163fb8b930a6c 288 Pfam PF02569 Pantoate-beta-alanine ligase 3 276 1.1E-101 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BEN31_06070 482fadb4e8771a46cc7163fb8b930a6c 288 SUPERFAMILY SSF52374 1 280 3.75E-104 T 12-10-2018 BEN31_06070 482fadb4e8771a46cc7163fb8b930a6c 288 Gene3D G3DSA:3.30.1300.10 178 276 7.1E-32 T 12-10-2018 BEN31_06070 482fadb4e8771a46cc7163fb8b930a6c 288 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 38.986 T 12-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 BEN31_06070 482fadb4e8771a46cc7163fb8b930a6c 288 Gene3D G3DSA:3.40.50.620 1 177 9.6E-74 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_06070 482fadb4e8771a46cc7163fb8b930a6c 288 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 85 7.6E-10 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 SUPERFAMILY SSF46785 7 80 9.1E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 6.8E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 Gene3D G3DSA:3.90.1150.10 115 474 8.8E-116 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 Gene3D G3DSA:1.10.10.10 1 77 5.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 SUPERFAMILY SSF53383 94 478 1.67E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 Pfam PF00155 Aminotransferase class I and II 118 472 9.0E-33 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 Gene3D G3DSA:3.40.640.10 152 371 8.8E-116 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_15695 6180ba17b39c62465e0da3bb397b8d27 492 SMART SM00345 17 76 2.6E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13935 a252ebb6ea655725dbd58a764f65d93a 689 Pfam PF01968 Hydantoinase/oxoprolinase 205 490 3.1E-90 T 12-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 BEN31_13935 a252ebb6ea655725dbd58a764f65d93a 689 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 7 183 7.1E-44 T 12-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 BEN31_13935 a252ebb6ea655725dbd58a764f65d93a 689 SUPERFAMILY SSF53067 6 483 2.18E-9 T 12-10-2018 BEN31_10545 039e0cd176cf92fb3dce238ec39c7937 449 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 10 347 1.4E-121 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase BEN31_10545 039e0cd176cf92fb3dce238ec39c7937 449 Gene3D G3DSA:3.50.50.60 1 431 6.9E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10545 039e0cd176cf92fb3dce238ec39c7937 449 SUPERFAMILY SSF51905 7 257 2.19E-16 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.7E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.7E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.7E-7 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 SUPERFAMILY SSF52172 1 126 2.28E-22 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 Gene3D G3DSA:3.40.50.12740 3 212 1.9E-45 T 12-10-2018 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 SUPERFAMILY SSF46894 144 209 1.29E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 4.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 SMART SM00421 150 207 1.4E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 Pfam PF00072 Response regulator receiver domain 4 116 9.4E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01775 d734cc6799eaf0287d87592cd9c41f7a 213 SMART SM00448 2 116 3.1E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_10460 d488b2f631e6534fd0568cb3c0beb8ac 481 Pfam PF01565 FAD binding domain 51 184 4.2E-33 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BEN31_10460 d488b2f631e6534fd0568cb3c0beb8ac 481 Gene3D G3DSA:3.30.465.40 21 231 7.6E-29 T 12-10-2018 BEN31_10460 d488b2f631e6534fd0568cb3c0beb8ac 481 SUPERFAMILY SSF55103 190 469 5.01E-18 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BEN31_10460 d488b2f631e6534fd0568cb3c0beb8ac 481 SUPERFAMILY SSF56176 36 211 4.67E-41 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN31_16395 812c7aea5735fb77475ac6ced7fa6f26 412 SUPERFAMILY SSF161098 160 396 9.94E-58 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_16395 812c7aea5735fb77475ac6ced7fa6f26 412 SUPERFAMILY SSF160964 107 164 1.83E-8 T 12-10-2018 BEN31_16395 812c7aea5735fb77475ac6ced7fa6f26 412 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 402 1.7E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_16395 812c7aea5735fb77475ac6ced7fa6f26 412 Gene3D G3DSA:1.10.3720.10 155 412 4.1E-68 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_06160 a10026732e7fcbb8ca00c7f1e632f516 374 SUPERFAMILY SSF51395 7 342 2.23E-91 T 12-10-2018 BEN31_06160 a10026732e7fcbb8ca00c7f1e632f516 374 Gene3D G3DSA:3.20.20.70 5 370 1.2E-102 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_06160 a10026732e7fcbb8ca00c7f1e632f516 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 339 9.5E-96 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF52777 198 444 4.56E-51 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF00501 AMP-binding enzyme 478 871 5.2E-95 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF00550 Phosphopantetheine attachment site 982 1045 1.6E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF00550 Phosphopantetheine attachment site 2501 2564 1.7E-13 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF51735 1959 2186 3.24E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2207 2408 8.2E-22 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.30.70.3290 1508 1919 7.0E-129 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF47336 974 1046 2.22E-16 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SMART SM00825 Beta-ketoacyl synthase 1070 1495 2.8E-174 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF00668 Condensation domain 2581 3015 2.1E-112 T 12-10-2018 IPR001242 Condensation domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF00668 Condensation domain 14 456 2.0E-98 T 12-10-2018 IPR001242 Condensation domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF51735 2205 2387 3.17E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:1.10.1200.10 967 1054 5.8E-21 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1445 1555 3.3E-18 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF13193 AMP-binding enzyme C-terminal domain 879 952 5.6E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.30.300.30 866 966 3.1E-33 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF47336 2491 2596 1.57E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF08659 KR domain 2207 2396 9.2E-37 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1325 1441 3.0E-43 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF56801 436 993 5.76E-145 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.30.559.30 2760 3001 2.4E-132 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SMART SM01294 2496 2564 0.0038 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.30.559.10 20 387 9.1E-116 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF00698 Acyl transferase domain 1591 1907 2.1E-44 T 12-10-2018 IPR014043 Acyl transferase BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF52151 1589 1885 1.02E-58 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF53901 1065 1491 3.38E-86 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SMART SM00823 Phosphopantetheine attachment site 980 1049 8.5E-6 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SMART SM00823 Phosphopantetheine attachment site 2499 2568 0.0036 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.40.50.720 1932 2467 1.1E-67 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF52777 2763 3003 1.56E-52 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 499 895 2.6E-128 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:1.10.1200.10 2486 2573 4.1E-21 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.40.366.10 1589 1890 7.0E-129 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.30.559.30 198 453 9.1E-116 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.40.50.12780 465 865 3.4E-124 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1230 1246 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.30.70.250 1722 1783 7.0E-129 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF52777 20 194 1.56E-40 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.40.47.10 1064 1495 6.2E-156 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1068 1317 1.3E-67 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1593 1889 1.2E-64 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 SUPERFAMILY SSF52777 2578 2776 1.33E-41 T 12-10-2018 BEN31_12475 394784b61800d6fd4a2127e10ea6b0e4 3029 Gene3D G3DSA:3.30.559.10 2585 2949 2.4E-132 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_16765 6d549f3258e540a86f6019663bf6c186 217 TIGRFAM TIGR03656 IsdC: heme uptake protein IsdC 1 212 2.3E-62 T 12-10-2018 IPR019909 Haem uptake protein IsdC GO:0009274|GO:0015886|GO:0030492 BEN31_16765 6d549f3258e540a86f6019663bf6c186 217 SUPERFAMILY SSF158911 15 157 7.32E-43 T 12-10-2018 IPR037250 NEAT domain superfamily BEN31_16765 6d549f3258e540a86f6019663bf6c186 217 SMART SM00725 30 151 1.7E-46 T 12-10-2018 IPR006635 NEAT domain BEN31_16765 6d549f3258e540a86f6019663bf6c186 217 Pfam PF05031 Iron Transport-associated domain 29 144 7.6E-38 T 12-10-2018 IPR006635 NEAT domain BEN31_16765 6d549f3258e540a86f6019663bf6c186 217 TIGRFAM TIGR03063 srtB_target: sortase B cell surface sorting signal 186 212 8.5E-6 T 12-10-2018 IPR017502 Sortase B cell surface sorting signal BEN31_16765 6d549f3258e540a86f6019663bf6c186 217 Gene3D G3DSA:2.60.40.1850 21 152 1.1E-45 T 12-10-2018 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 1.3E-36 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 PIRSF PIRSF000149 1 335 8.4E-138 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 Gene3D G3DSA:3.30.360.10 151 315 7.0E-152 T 12-10-2018 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 SMART SM00846 3 152 3.3E-88 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 5 325 8.6E-135 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 Gene3D G3DSA:3.40.50.720 5 328 7.0E-152 T 12-10-2018 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 SUPERFAMILY SSF55347 152 314 8.33E-72 T 12-10-2018 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 7.3E-69 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 6.5E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 6.5E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 6.5E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 6.5E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 6.5E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_03290 b11a2593a0a7109f845d5640b8b301d4 340 SUPERFAMILY SSF51735 1 179 1.41E-61 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_08715 1eb31a1c78dde6e0a9fb6d53909cddc0 364 SUPERFAMILY SSF53756 1 361 1.98E-109 T 12-10-2018 BEN31_08715 1eb31a1c78dde6e0a9fb6d53909cddc0 364 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 358 5.6E-109 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08715 1eb31a1c78dde6e0a9fb6d53909cddc0 364 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 143 2.4E-50 T 12-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08715 1eb31a1c78dde6e0a9fb6d53909cddc0 364 Gene3D G3DSA:3.40.50.2000 164 346 3.7E-109 T 12-10-2018 BEN31_08715 1eb31a1c78dde6e0a9fb6d53909cddc0 364 Gene3D G3DSA:3.40.50.2000 4 352 3.7E-109 T 12-10-2018 BEN31_08715 1eb31a1c78dde6e0a9fb6d53909cddc0 364 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 353 6.6E-43 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BEN31_08715 1eb31a1c78dde6e0a9fb6d53909cddc0 364 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 33.701 T 12-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_11730 a49d0ffab5b4085f009f35fbccffe7c2 327 SUPERFAMILY SSF53448 4 252 3.56E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_11730 a49d0ffab5b4085f009f35fbccffe7c2 327 Gene3D G3DSA:3.90.550.10 2 208 3.1E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_11730 a49d0ffab5b4085f009f35fbccffe7c2 327 Pfam PF00535 Glycosyl transferase family 2 7 168 2.7E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 445 1.6E-141 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 447 34.775 T 12-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 Gene3D G3DSA:3.40.50.720 7 93 4.8E-27 T 12-10-2018 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 SUPERFAMILY SSF51984 7 98 8.89E-16 T 12-10-2018 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 363 1.5E-7 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 Gene3D G3DSA:3.90.190.20 313 446 1.6E-38 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 SUPERFAMILY SSF53244 308 447 1.1E-38 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 SUPERFAMILY SSF53623 101 306 2.9E-52 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 Gene3D G3DSA:3.40.1190.10 100 306 8.7E-63 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_08725 6db24856e7f2ad3fd6c0add937a6d625 448 Pfam PF08245 Mur ligase middle domain 115 289 1.5E-35 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 8.8E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 8.8E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 8.8E-15 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 SUPERFAMILY SSF143800 1 80 4.32E-19 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 Gene3D G3DSA:2.30.170.50 1 80 1.8E-19 T 12-10-2018 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 2 80 3.0E-14 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_02485 ca3352456542ac5f98c6358f3f785bec 80 Pfam PF01197 Ribosomal protein L31 2 79 1.8E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_09440 d5fa07f1b7896be93ea36aa064cef54c 218 Gene3D G3DSA:3.40.50.620 1 218 8.5E-78 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_09440 d5fa07f1b7896be93ea36aa064cef54c 218 SUPERFAMILY SSF52402 3 209 4.63E-67 T 12-10-2018 BEN31_09440 d5fa07f1b7896be93ea36aa064cef54c 218 PIRSF PIRSF006293 2 218 6.9E-81 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN31_09440 d5fa07f1b7896be93ea36aa064cef54c 218 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 204 4.3E-89 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN31_09440 d5fa07f1b7896be93ea36aa064cef54c 218 Pfam PF06508 Queuosine biosynthesis protein QueC 5 211 2.6E-87 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN31_09440 d5fa07f1b7896be93ea36aa064cef54c 218 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 217 50.714 T 12-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 SUPERFAMILY SSF53807 17 311 3.24E-87 T 12-10-2018 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 197 214 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 60 78 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 139 158 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 223 241 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 268 286 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 289 307 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 35 56 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 79 98 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00691 Adhesin B signature 246 263 2.8E-80 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 Gene3D G3DSA:3.40.50.1980 24 181 4.1E-52 T 12-10-2018 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00690 Adhesin family signature 276 295 3.0E-49 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00690 Adhesin family signature 250 268 3.0E-49 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00690 Adhesin family signature 35 53 3.0E-49 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00690 Adhesin family signature 66 79 3.0E-49 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00690 Adhesin family signature 197 218 3.0E-49 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 PRINTS PR00690 Adhesin family signature 79 96 3.0E-49 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 Gene3D G3DSA:3.40.50.1980 182 312 1.9E-45 T 12-10-2018 BEN31_01040 9d9bfc52340a6c034ae7f3120f80ca11 312 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 308 4.5E-78 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BEN31_03605 2f0f0acaf444d826e2e8d59d8139f6a8 394 PIRSF PIRSF016636 2 393 7.4E-88 T 12-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB BEN31_03605 2f0f0acaf444d826e2e8d59d8139f6a8 394 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 3 390 9.9E-159 T 12-10-2018 IPR024024 D-alanyl transfer protein DltB BEN31_03605 2f0f0acaf444d826e2e8d59d8139f6a8 394 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 142 380 1.6E-15 T 12-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT BEN31_03605 2f0f0acaf444d826e2e8d59d8139f6a8 394 PIRSF PIRSF500216 1 394 8.6E-164 T 12-10-2018 IPR024024 D-alanyl transfer protein DltB BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 SUPERFAMILY SSF52777 187 416 2.0E-86 T 12-10-2018 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 417 2.4E-177 T 12-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 SUPERFAMILY SSF51230 2 94 1.1E-26 T 12-10-2018 IPR011053 Single hybrid motif BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 Pfam PF00364 Biotin-requiring enzyme 3 75 2.5E-23 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 Gene3D G3DSA:2.40.50.100 1 103 5.5E-26 T 12-10-2018 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 SUPERFAMILY SSF47005 116 161 3.27E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 188 416 1.8E-78 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 Gene3D G3DSA:3.30.559.10 186 417 5.2E-89 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 Gene3D G3DSA:4.10.320.10 123 161 3.6E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN31_06605 50952bbcea50ce168adbb62b2f01b884 418 Pfam PF02817 e3 binding domain 123 156 9.0E-12 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN31_03730 f73cdbc3c910fa55cfc98afc4272e636 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 274 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_03730 f73cdbc3c910fa55cfc98afc4272e636 430 Pfam PF00202 Aminotransferase class-III 35 399 5.4E-76 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_03730 f73cdbc3c910fa55cfc98afc4272e636 430 Gene3D G3DSA:3.90.1150.10 11 422 1.9E-183 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_03730 f73cdbc3c910fa55cfc98afc4272e636 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 7 428 103.833 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BEN31_03730 f73cdbc3c910fa55cfc98afc4272e636 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 7 427 4.2E-201 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BEN31_03730 f73cdbc3c910fa55cfc98afc4272e636 430 Gene3D G3DSA:3.40.640.10 73 320 1.9E-183 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_03730 f73cdbc3c910fa55cfc98afc4272e636 430 SUPERFAMILY SSF53383 5 428 1.97E-131 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_05955 04ea43f7da30185ab1d6fcde8f9d0f09 222 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 9 211 2.4E-45 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BEN31_05955 04ea43f7da30185ab1d6fcde8f9d0f09 222 Gene3D G3DSA:3.20.20.70 6 216 7.3E-52 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_05955 04ea43f7da30185ab1d6fcde8f9d0f09 222 SUPERFAMILY SSF51366 7 213 1.27E-43 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_05955 04ea43f7da30185ab1d6fcde8f9d0f09 222 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 6 217 31.803 T 12-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 BEN31_07120 2188c68cb1b60969957d21710a992726 88 Gene3D G3DSA:3.40.50.2300 1 88 1.1E-21 T 12-10-2018 BEN31_07120 2188c68cb1b60969957d21710a992726 88 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 6.6E-16 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_07120 2188c68cb1b60969957d21710a992726 88 SUPERFAMILY SSF52794 1 86 5.89E-20 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_04995 5293ac080184e8afd099e95c90a79ae8 113 Pfam PF08671 Anti-repressor SinI 76 103 1.5E-12 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 BEN31_04995 5293ac080184e8afd099e95c90a79ae8 113 SUPERFAMILY SSF47413 2 69 4.83E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_04995 5293ac080184e8afd099e95c90a79ae8 113 SMART SM00530 7 63 1.2E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_04995 5293ac080184e8afd099e95c90a79ae8 113 Pfam PF01381 Helix-turn-helix 8 60 7.7E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_04995 5293ac080184e8afd099e95c90a79ae8 113 Gene3D G3DSA:1.10.260.40 3 113 1.8E-32 T 12-10-2018 BEN31_04995 5293ac080184e8afd099e95c90a79ae8 113 SUPERFAMILY SSF47406 76 110 5.89E-12 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 PIRSF PIRSF000513 4 266 7.8E-99 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 Pfam PF02110 Hydroxyethylthiazole kinase family 10 255 2.1E-92 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 256 1.0E-95 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 2.1E-44 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 2.1E-44 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 2.1E-44 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 2.1E-44 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 2.1E-44 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 2.1E-44 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 261 33.79 T 12-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 SUPERFAMILY SSF53613 8 261 7.33E-60 T 12-10-2018 IPR029056 Ribokinase-like BEN31_16975 dab9b502cbc2b3e2c75ffb8e18399eb6 274 Gene3D G3DSA:3.40.1190.20 1 270 4.0E-101 T 12-10-2018 IPR029056 Ribokinase-like BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:3.30.420.10 413 559 5.4E-45 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Pfam PF02811 PHP domain 336 694 2.4E-52 T 12-10-2018 IPR004013 PHP domain GO:0003824 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Pfam PF14579 Helix-hairpin-helix motif 1352 1429 3.2E-8 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 230 1437 0.0 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 SMART SM00481 335 402 7.5E-25 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Pfam PF00929 Exonuclease 422 577 1.2E-43 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1437 462.334 T 12-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Pfam PF14480 DNA polymerase III polC-type N-terminus I 11 83 4.4E-23 T 12-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:2.40.50.140 219 319 4.4E-33 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:1.10.150.870 1288 1423 2.1E-52 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:1.10.100.20 995 1042 7.2E-59 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:1.10.150.700 1234 1286 9.0E-15 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:1.10.150.700 1096 1185 4.3E-36 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 SUPERFAMILY SSF50249 234 319 8.57E-11 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 SMART SM00479 420 587 5.5E-58 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 413 638 2.3E-76 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:3.20.20.140 560 806 5.6E-54 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Pfam PF11490 DNA polymerase III polC-type N-terminus II 97 207 1.4E-28 T 12-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 SUPERFAMILY SSF53098 420 877 1.03E-107 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:3.30.1900.20 973 1095 7.2E-59 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Gene3D G3DSA:3.20.20.140 335 403 3.0E-10 T 12-10-2018 BEN31_08010 7922d54be9164040a4d3359ce7d4915c 1437 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 825 1234 3.0E-98 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 Gene3D G3DSA:3.40.50.10490 58 226 2.2E-147 T 12-10-2018 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.742 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 6.3E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 6.3E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 6.3E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 6.3E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 6.3E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 6.3E-28 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 Gene3D G3DSA:3.40.50.10490 1 57 1.2E-18 T 12-10-2018 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 Pfam PF00342 Phosphoglucose isomerase 76 296 8.2E-19 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 Pfam PF00342 Phosphoglucose isomerase 369 426 4.6E-5 T 12-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 SUPERFAMILY SSF53697 4 447 6.33E-143 T 12-10-2018 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 12-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_01945 efc919fb675a625f8d83bf6c62402015 451 Gene3D G3DSA:3.40.50.10490 227 417 2.2E-147 T 12-10-2018 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 Gene3D G3DSA:1.20.120.1810 30 131 1.2E-25 T 12-10-2018 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 7 239 5.6E-135 T 12-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 Pfam PF04545 Sigma-70, region 4 180 233 1.0E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 PIRSF PIRSF000770 2 239 1.1E-79 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 SUPERFAMILY SSF88946 25 131 3.4E-35 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 1.1E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 7.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 7.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 7.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 7.1E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 SUPERFAMILY SSF88659 143 236 1.05E-21 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 Gene3D G3DSA:1.10.10.10 167 239 7.9E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08665 2c1d69045868f05e810fe1a270cbf4c1 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_13780 b7aa0324a1a81d1be19665e3da121a28 248 Gene3D G3DSA:3.40.50.300 1 248 2.2E-74 T 12-10-2018 BEN31_13780 b7aa0324a1a81d1be19665e3da121a28 248 SMART SM00382 26 216 3.9E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13780 b7aa0324a1a81d1be19665e3da121a28 248 PIRSF PIRSF039085 1 244 1.1E-99 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BEN31_13780 b7aa0324a1a81d1be19665e3da121a28 248 Pfam PF00005 ABC transporter 17 168 1.4E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_13780 b7aa0324a1a81d1be19665e3da121a28 248 SUPERFAMILY SSF52540 1 238 2.21E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_13780 b7aa0324a1a81d1be19665e3da121a28 248 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_15325 02db1981475145d06eac736f017cc0c7 472 SUPERFAMILY SSF56322 16 464 1.83E-147 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_15325 02db1981475145d06eac736f017cc0c7 472 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 100 457 1.8E-123 T 12-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I BEN31_15325 02db1981475145d06eac736f017cc0c7 472 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 150 6.8E-30 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_15325 02db1981475145d06eac736f017cc0c7 472 Pfam PF00425 chorismate binding enzyme 201 454 3.6E-99 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BEN31_15325 02db1981475145d06eac736f017cc0c7 472 PRINTS PR00095 Anthranilate synthase component I signature 302 315 8.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_15325 02db1981475145d06eac736f017cc0c7 472 PRINTS PR00095 Anthranilate synthase component I signature 316 329 8.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_15325 02db1981475145d06eac736f017cc0c7 472 PRINTS PR00095 Anthranilate synthase component I signature 411 425 8.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_15325 02db1981475145d06eac736f017cc0c7 472 PRINTS PR00095 Anthranilate synthase component I signature 396 410 8.6E-18 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_15325 02db1981475145d06eac736f017cc0c7 472 Gene3D G3DSA:3.60.120.10 2 470 2.3E-163 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_16350 bb788e6328a8aa0cf20d7dd40c928f96 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 6.0E-159 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BEN31_16350 bb788e6328a8aa0cf20d7dd40c928f96 379 Gene3D G3DSA:3.40.50.10350 1 361 2.5E-141 T 12-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold BEN31_16350 bb788e6328a8aa0cf20d7dd40c928f96 379 PIRSF PIRSF006078 1 378 1.8E-139 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BEN31_16350 bb788e6328a8aa0cf20d7dd40c928f96 379 SUPERFAMILY SSF110738 1 375 3.79E-141 T 12-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 BEN31_16350 bb788e6328a8aa0cf20d7dd40c928f96 379 Gene3D G3DSA:3.90.1510.10 42 276 2.5E-141 T 12-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 BEN31_16350 bb788e6328a8aa0cf20d7dd40c928f96 379 Pfam PF02595 Glycerate kinase family 3 373 1.5E-149 T 12-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 BEN31_10850 dc902f7c1e35845123ae22e6def1b9cd 45 Pfam PF14149 YhfH-like protein 3 38 5.0E-20 T 12-10-2018 IPR025432 YhfH-like protein BEN31_17815 4e0d7f4057f4c1cc92fc10243b484f7b 272 Pfam PF00460 Flagella basal body rod protein 12 35 1.1E-7 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN31_17815 4e0d7f4057f4c1cc92fc10243b484f7b 272 SUPERFAMILY SSF117143 107 233 1.7E-12 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BEN31_17815 4e0d7f4057f4c1cc92fc10243b484f7b 272 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 143 1.5E-21 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN31_17815 4e0d7f4057f4c1cc92fc10243b484f7b 272 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 156 254 1.2E-20 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN31_17815 4e0d7f4057f4c1cc92fc10243b484f7b 272 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 193 269 7.3E-21 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 65 79 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 Gene3D G3DSA:3.90.180.10 16 344 1.2E-137 T 12-10-2018 BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 Pfam PF00107 Zinc-binding dehydrogenase 188 310 4.5E-23 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 SMART SM00829 17 344 5.1E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 Gene3D G3DSA:3.40.50.720 162 316 1.2E-137 T 12-10-2018 BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 SUPERFAMILY SSF51735 151 314 2.11E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 SUPERFAMILY SSF50129 14 174 5.17E-53 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_13175 1cf9ccaacaaf964309e2c1f2ba069cf8 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 146 1.1E-27 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 2090 2277 4.56E-41 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF56801 1463 2020 5.63E-146 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3412 3564 2.0E-45 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF56801 423 990 1.96E-143 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2679 2690 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF13193 AMP-binding enzyme C-terminal domain 2930 3001 6.9E-12 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF13193 AMP-binding enzyme C-terminal domain 1911 1980 8.3E-10 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF13193 AMP-binding enzyme C-terminal domain 877 951 4.1E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.300.30 1896 1995 2.4E-30 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SMART SM00823 Phosphopantetheine attachment site 3027 3095 0.019 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SMART SM00823 Phosphopantetheine attachment site 978 1047 0.039 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SMART SM00823 Phosphopantetheine attachment site 2007 2076 0.22 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.30 1228 1470 1.7E-135 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2031 2046 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.40.50.12780 457 862 2.6E-122 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 8 182 4.67E-27 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00550 Phosphopantetheine attachment site 980 1043 1.0E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00550 Phosphopantetheine attachment site 2010 2069 5.2E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00550 Phosphopantetheine attachment site 3030 3087 1.4E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.10 2093 2451 2.6E-134 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.30 3275 3546 1.4E-66 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 188 427 3.67E-43 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 1058 1225 9.67E-41 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.300.30 2917 3015 4.5E-31 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.40.50.12780 2528 2916 1.3E-120 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF47336 3019 3092 7.72E-19 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1648 1659 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00668 Condensation domain 6 444 2.3E-97 T 12-10-2018 IPR001242 Condensation domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00668 Condensation domain 1060 1484 6.8E-120 T 12-10-2018 IPR001242 Condensation domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00668 Condensation domain 3105 3557 2.7E-107 T 12-10-2018 IPR001242 Condensation domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00668 Condensation domain 2091 2522 2.7E-127 T 12-10-2018 IPR001242 Condensation domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.10 1064 1414 1.7E-135 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF47336 1999 2070 4.84E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.10 7 371 3.6E-77 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00501 AMP-binding enzyme 464 869 4.7E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00501 AMP-binding enzyme 2548 2922 2.1E-86 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Pfam PF00501 AMP-binding enzyme 1506 1903 1.9E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF56801 2499 3040 7.46E-148 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 3111 3284 8.12E-35 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:1.10.1200.10 1996 2080 5.1E-24 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:1.10.1200.10 966 1051 1.5E-23 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 2264 2510 7.56E-58 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF47336 970 1044 8.64E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.10 3095 3274 6.6E-56 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 3293 3540 1.22E-35 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.40.50.12780 1496 1895 1.2E-125 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 485 893 3.9E-128 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2563 2946 3.4E-121 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1527 1927 7.5E-122 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.300.30 863 965 2.2E-28 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.30 2261 2506 2.6E-134 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 SUPERFAMILY SSF52777 1226 1469 7.89E-63 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:1.10.1200.10 3016 3094 3.5E-23 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 Gene3D G3DSA:3.30.559.30 186 427 3.6E-77 T 12-10-2018 BEN31_13905 3d3d927dcb43ed7ef23cf30067b8fafd 3568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 604 615 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13965 895596155224ad09493330a0332c4b3a 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 4.3E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_13965 895596155224ad09493330a0332c4b3a 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.3E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_13965 895596155224ad09493330a0332c4b3a 138 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.3E-11 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_13965 895596155224ad09493330a0332c4b3a 138 SMART SM00344 2 107 9.9E-20 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN31_13965 895596155224ad09493330a0332c4b3a 138 Gene3D G3DSA:3.30.70.920 52 137 7.6E-10 T 12-10-2018 BEN31_13965 895596155224ad09493330a0332c4b3a 138 SUPERFAMILY SSF54909 63 136 6.17E-9 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_13965 895596155224ad09493330a0332c4b3a 138 Pfam PF01037 Lrp/AsnC ligand binding domain 69 133 1.2E-6 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN31_13965 895596155224ad09493330a0332c4b3a 138 SUPERFAMILY SSF46785 1 58 6.28E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13965 895596155224ad09493330a0332c4b3a 138 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 2.6E-14 T 12-10-2018 BEN31_13965 895596155224ad09493330a0332c4b3a 138 Gene3D G3DSA:1.10.10.10 1 51 1.3E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_18260 d4087f1a4df8588fa465516d7b08e40e 375 SUPERFAMILY SSF52540 45 346 3.09E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18260 d4087f1a4df8588fa465516d7b08e40e 375 Pfam PF04851 Type III restriction enzyme, res subunit 32 180 2.7E-10 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BEN31_18260 d4087f1a4df8588fa465516d7b08e40e 375 SMART SM00490 255 336 1.3E-10 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_18260 d4087f1a4df8588fa465516d7b08e40e 375 Gene3D G3DSA:3.40.50.300 23 195 9.6E-16 T 12-10-2018 BEN31_18260 d4087f1a4df8588fa465516d7b08e40e 375 Pfam PF00271 Helicase conserved C-terminal domain 236 335 4.3E-12 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_18260 d4087f1a4df8588fa465516d7b08e40e 375 SMART SM00487 29 211 2.4E-18 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_18260 d4087f1a4df8588fa465516d7b08e40e 375 Gene3D G3DSA:3.40.50.300 210 349 5.9E-28 T 12-10-2018 BEN31_17935 658fb7a8d1c58f9bd1e5951b47793daa 380 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 210 377 1.9E-24 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_17935 658fb7a8d1c58f9bd1e5951b47793daa 380 Gene3D G3DSA:3.30.300.210 226 380 1.9E-15 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BEN31_17935 658fb7a8d1c58f9bd1e5951b47793daa 380 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 6 379 2.6E-66 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 ProSitePatterns PS00760 Signal peptidases I lysine active site. 87 99 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 ProSitePatterns PS00501 Signal peptidases I serine active site. 43 50 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 34 50 4.3E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 85 97 4.3E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 139 158 4.3E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 SUPERFAMILY SSF51306 32 186 7.5E-49 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 181 4.7E-54 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 Gene3D G3DSA:2.10.109.10 64 187 3.9E-37 T 12-10-2018 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 ProSitePatterns PS00761 Signal peptidases I signature 3. 144 157 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BEN31_11435 3c20f458307b6b3a2f319111a52e4983 188 Pfam PF00717 Peptidase S24-like 41 109 5.7E-19 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN31_17630 f6185068565aedf8d5036e997db050c1 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.045 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 12-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 SUPERFAMILY SSF52943 2 287 6.87E-92 T 12-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 Gene3D G3DSA:3.40.1380.10 60 206 1.7E-103 T 12-10-2018 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 2.1E-40 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 2.1E-40 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 2.1E-40 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 PRINTS PR00126 ATP synthase gamma subunit signature 72 91 2.1E-40 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 Pfam PF00231 ATP synthase 3 287 1.5E-99 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 287 1.7E-110 T 12-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17630 f6185068565aedf8d5036e997db050c1 288 Gene3D G3DSA:1.10.287.80 6 283 1.7E-103 T 12-10-2018 BEN31_07085 9109870b9a68e4c7aa85ba7c3e9d70fe 289 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 84 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_07085 9109870b9a68e4c7aa85ba7c3e9d70fe 289 SUPERFAMILY SSF51569 1 284 2.75E-94 T 12-10-2018 BEN31_07085 9109870b9a68e4c7aa85ba7c3e9d70fe 289 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 3.1E-95 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_07085 9109870b9a68e4c7aa85ba7c3e9d70fe 289 Gene3D G3DSA:3.20.20.70 3 284 5.8E-103 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_07085 9109870b9a68e4c7aa85ba7c3e9d70fe 289 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_07085 9109870b9a68e4c7aa85ba7c3e9d70fe 289 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 284 5.9E-92 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_07085 9109870b9a68e4c7aa85ba7c3e9d70fe 289 PIRSF PIRSF001359 1 284 8.6E-100 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 71.535 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 Gene3D G3DSA:3.30.1360.40 68 149 8.5E-34 T 12-10-2018 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 4.2E-31 T 12-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 3.0E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 3.0E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 3.0E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 3.0E-29 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 1.7E-56 T 12-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 145 2.8E-27 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 SUPERFAMILY SSF46785 5 78 6.96E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 SUPERFAMILY SSF55252 80 148 5.89E-22 T 12-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 Gene3D G3DSA:1.10.10.10 4 67 1.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05170 3fe7a352cfb15dcec806f4c8ab96beee 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 2.0E-26 T 12-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 BEN31_13680 34bfdaa1fae335790176c5dbaefcba6c 130 Gene3D G3DSA:3.30.1330.40 2 129 7.5E-24 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_13680 34bfdaa1fae335790176c5dbaefcba6c 130 SUPERFAMILY SSF55298 3 128 1.19E-27 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_13680 34bfdaa1fae335790176c5dbaefcba6c 130 Pfam PF01042 Endoribonuclease L-PSP 11 125 3.6E-18 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BEN31_01260 f4e9bc242527825b736f5c326a262341 292 SUPERFAMILY SSF46689 5 69 4.03E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_01260 f4e9bc242527825b736f5c326a262341 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_01260 f4e9bc242527825b736f5c326a262341 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_01260 f4e9bc242527825b736f5c326a262341 292 Gene3D G3DSA:1.10.357.10 1 194 2.8E-29 T 12-10-2018 BEN31_01260 f4e9bc242527825b736f5c326a262341 292 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 2.5E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 Pfam PF00089 Trypsin 110 284 6.3E-16 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 PRINTS PR00839 V8 serine protease family signature 95 112 4.7E-14 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 PRINTS PR00839 V8 serine protease family signature 264 276 4.7E-14 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 PRINTS PR00839 V8 serine protease family signature 119 136 4.7E-14 T 12-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 SUPERFAMILY SSF50494 89 297 1.38E-36 T 12-10-2018 IPR009003 Peptidase S1, PA clan BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 SMART SM00020 97 296 1.6E-4 T 12-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 Gene3D G3DSA:2.40.10.10 90 277 3.3E-74 T 12-10-2018 BEN31_07475 ad29ab68eabb823257458ab7f993f9df 302 Gene3D G3DSA:2.40.10.10 105 201 3.3E-74 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00097 Anthranilate synthase component II signature 214 223 1.3E-6 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00097 Anthranilate synthase component II signature 241 252 1.3E-6 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00097 Anthranilate synthase component II signature 325 338 1.3E-6 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 6.3E-54 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 9.3E-37 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 9.3E-37 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 9.3E-37 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 9.3E-37 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 9.3E-37 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 SUPERFAMILY SSF52317 139 351 6.23E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 Pfam PF00117 Glutamine amidotransferase class-I 174 348 9.0E-46 T 12-10-2018 IPR017926 Glutamine amidotransferase BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 49.127 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 Gene3D G3DSA:3.50.30.20 1 148 1.8E-57 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 7.3E-12 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 325 338 7.3E-12 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 7.3E-12 T 12-10-2018 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 351 1.9E-146 T 12-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 Gene3D G3DSA:3.40.50.880 164 360 5.2E-36 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 SUPERFAMILY SSF52021 1 143 5.23E-58 T 12-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08545 fc76f2e5b5b0555df4f46eb12f85e013 364 SMART SM01097 1 131 1.1E-91 T 12-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 SMART SM00382 593 770 9.4E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 Gene3D G3DSA:3.30.980.40 451 554 2.7E-36 T 12-10-2018 BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 SUPERFAMILY SSF52540 531 821 8.5E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 Gene3D G3DSA:3.40.50.300 555 834 3.5E-114 T 12-10-2018 BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 Pfam PF01580 FtsK/SpoIIIE family 558 749 2.0E-66 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 Pfam PF09397 Ftsk gamma domain 846 907 1.1E-28 T 12-10-2018 IPR018541 FtsK gamma domain BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 Gene3D G3DSA:1.10.10.10 839 905 5.3E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 SMART SM00843 844 909 2.5E-36 T 12-10-2018 IPR018541 FtsK gamma domain BEN31_02890 b410126e74be6abf8aae762843ad3f60 915 SUPERFAMILY SSF46785 846 910 1.02E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14480 16cf66dce7f2ec8c29217576a08572ba 360 PIRSF PIRSF000112 1 358 2.4E-107 T 12-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 BEN31_14480 16cf66dce7f2ec8c29217576a08572ba 360 Gene3D G3DSA:1.20.1090.10 156 360 2.2E-54 T 12-10-2018 BEN31_14480 16cf66dce7f2ec8c29217576a08572ba 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 328 2.6E-41 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BEN31_14480 16cf66dce7f2ec8c29217576a08572ba 360 Gene3D G3DSA:3.40.50.1970 8 153 4.8E-21 T 12-10-2018 BEN31_14480 16cf66dce7f2ec8c29217576a08572ba 360 SUPERFAMILY SSF56796 11 349 3.79E-53 T 12-10-2018 BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 7.7E-79 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 233 1.8E-106 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 141 155 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 12-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 233 1.2E-134 T 12-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 SUPERFAMILY SSF53335 3 227 7.45E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 233 35.153 T 12-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 BEN31_05905 363c496ccdeebf5f8142b3d14db983e0 234 Gene3D G3DSA:3.40.50.150 15 234 1.8E-62 T 12-10-2018 BEN31_17190 62d4daf3600a59913827f0a934a08d72 470 Gene3D G3DSA:3.40.50.2000 286 394 2.0E-5 T 12-10-2018 BEN31_17190 62d4daf3600a59913827f0a934a08d72 470 SUPERFAMILY SSF53756 221 460 7.85E-21 T 12-10-2018 BEN31_17190 62d4daf3600a59913827f0a934a08d72 470 Gene3D G3DSA:3.40.50.2000 251 285 2.0E-5 T 12-10-2018 BEN31_17190 62d4daf3600a59913827f0a934a08d72 470 Pfam PF05159 Capsule polysaccharide biosynthesis protein 309 391 1.2E-7 T 12-10-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 BEN31_03800 ab65efc45681b21cb446c16f38abb114 267 Pfam PF13614 AAA domain 4 160 2.8E-25 T 12-10-2018 IPR025669 AAA domain BEN31_03800 ab65efc45681b21cb446c16f38abb114 267 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 263 3.3E-126 T 12-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 BEN31_03800 ab65efc45681b21cb446c16f38abb114 267 PIRSF PIRSF003092 1 267 2.2E-95 T 12-10-2018 IPR025501 ATP binding protein MinD BEN31_03800 ab65efc45681b21cb446c16f38abb114 267 Gene3D G3DSA:3.40.50.300 3 255 3.6E-70 T 12-10-2018 BEN31_03800 ab65efc45681b21cb446c16f38abb114 267 SUPERFAMILY SSF52540 5 259 2.8E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17800 6df770f5608d4f6a30936d0a8c189272 92 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BEN31_17800 6df770f5608d4f6a30936d0a8c189272 92 Gene3D G3DSA:1.10.10.60 1 92 6.1E-45 T 12-10-2018 BEN31_17800 6df770f5608d4f6a30936d0a8c189272 92 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 81 2.5E-46 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID BEN31_17800 6df770f5608d4f6a30936d0a8c189272 92 Pfam PF12116 Stage III sporulation protein D 2 82 5.0E-41 T 12-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID BEN31_01615 ff2d013be4915bccbfbad56d7162b725 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 324 1.1E-47 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_01615 ff2d013be4915bccbfbad56d7162b725 403 SUPERFAMILY SSF51905 5 337 8.91E-30 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_01615 ff2d013be4915bccbfbad56d7162b725 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.1E-6 T 12-10-2018 BEN31_01615 ff2d013be4915bccbfbad56d7162b725 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-6 T 12-10-2018 BEN31_01615 ff2d013be4915bccbfbad56d7162b725 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.1E-6 T 12-10-2018 BEN31_01615 ff2d013be4915bccbfbad56d7162b725 403 Gene3D G3DSA:3.50.50.100 1 403 6.7E-146 T 12-10-2018 BEN31_00265 b954727677503691ddbd067ff7cf1f7c 367 Pfam PF17236 Family of unknown function (DUF5309) 127 352 3.1E-25 T 12-10-2018 IPR035198 Protein of unknown function DUF5309 BEN31_14390 d8e43e2e023e6020a3fd5f6d6de9eced 467 Gene3D G3DSA:1.20.1740.10 9 464 3.9E-63 T 12-10-2018 BEN31_14390 d8e43e2e023e6020a3fd5f6d6de9eced 467 PIRSF PIRSF006060 1 466 1.3E-79 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_14390 d8e43e2e023e6020a3fd5f6d6de9eced 467 Pfam PF00324 Amino acid permease 19 455 9.6E-118 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_14390 d8e43e2e023e6020a3fd5f6d6de9eced 467 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 Pfam PF00258 Flavodoxin 70 201 8.0E-30 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 Gene3D G3DSA:3.40.50.80 452 606 1.2E-58 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 7 606 6.7E-262 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 SUPERFAMILY SSF52218 66 210 1.22E-46 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00369 Flavodoxin signature 69 82 2.9E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00369 Flavodoxin signature 173 192 2.9E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00369 Flavodoxin signature 117 128 2.9E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00369 Flavodoxin signature 149 159 2.9E-13 T 12-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 SUPERFAMILY SSF52343 451 606 2.62E-51 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PIRSF PIRSF000207 1 606 1.7E-270 T 12-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 Pfam PF00667 FAD binding domain 234 429 3.5E-29 T 12-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 Gene3D G3DSA:1.20.990.10 282 391 9.3E-72 T 12-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 Gene3D G3DSA:3.40.50.360 59 220 1.5E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 Pfam PF00175 Oxidoreductase NAD-binding domain 464 570 3.9E-17 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 Gene3D G3DSA:2.40.30.10 234 446 9.3E-72 T 12-10-2018 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 532 548 1.7E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 282 1.7E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 488 497 1.7E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 393 400 1.7E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 555 563 1.7E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 501 512 1.7E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 463 482 1.7E-28 T 12-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 BEN31_07030 e2c8ad7c03efe9061e23bc376fe3b2a9 606 SUPERFAMILY SSF63380 231 452 3.06E-61 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN31_13155 db838c4fce70e75b5be617935d5e2f69 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 440 3.4E-98 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BEN31_13155 db838c4fce70e75b5be617935d5e2f69 479 Gene3D G3DSA:1.20.1250.20 265 477 1.8E-20 T 12-10-2018 BEN31_13155 db838c4fce70e75b5be617935d5e2f69 479 Gene3D G3DSA:1.20.1720.10 16 224 2.9E-34 T 12-10-2018 BEN31_13155 db838c4fce70e75b5be617935d5e2f69 479 Pfam PF07690 Major Facilitator Superfamily 21 412 1.9E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_13155 db838c4fce70e75b5be617935d5e2f69 479 SUPERFAMILY SSF103473 8 472 1.48E-55 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 SMART SM00448 3 113 8.6E-34 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 Gene3D G3DSA:3.40.50.2300 2 129 5.3E-30 T 12-10-2018 BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 Gene3D G3DSA:1.10.10.10 130 224 2.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 SUPERFAMILY SSF52172 3 129 8.25E-32 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 SUPERFAMILY SSF46894 127 222 6.8E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 222 2.6E-20 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 SMART SM00862 151 222 3.4E-19 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_01270 1e344c40eb84d70dc7b13e03108a0c06 225 Pfam PF00072 Response regulator receiver domain 5 113 4.2E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_11085 93253a30f4d0d660af782c396be1a420 585 SUPERFAMILY SSF90123 8 324 3.66E-70 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_11085 93253a30f4d0d660af782c396be1a420 585 SUPERFAMILY SSF52540 329 573 4.42E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11085 93253a30f4d0d660af782c396be1a420 585 Gene3D G3DSA:3.40.50.300 328 582 1.8E-81 T 12-10-2018 BEN31_11085 93253a30f4d0d660af782c396be1a420 585 Pfam PF00664 ABC transporter transmembrane region 20 292 2.3E-40 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_11085 93253a30f4d0d660af782c396be1a420 585 Pfam PF00005 ABC transporter 356 501 4.6E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11085 93253a30f4d0d660af782c396be1a420 585 SMART SM00382 363 549 2.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_11085 93253a30f4d0d660af782c396be1a420 585 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_11085 93253a30f4d0d660af782c396be1a420 585 Gene3D G3DSA:1.20.1560.10 2 320 3.1E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_15560 47cd2b1ff91568e237e0ed3657e92048 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 1.1E-53 T 12-10-2018 IPR010375 Cyclic-di-AMP receptor BEN31_15560 47cd2b1ff91568e237e0ed3657e92048 109 Gene3D G3DSA:3.30.70.120 1 103 1.2E-43 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_15560 47cd2b1ff91568e237e0ed3657e92048 109 SUPERFAMILY SSF54913 1 107 3.5E-12 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN31_08920 52289a44f44744f53f733b31ff851adb 309 Hamap MF_00313 Glutaminase [glsA]. 5 309 44.323 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN31_08920 52289a44f44744f53f733b31ff851adb 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 309 9.2E-123 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN31_08920 52289a44f44744f53f733b31ff851adb 309 Pfam PF04960 Glutaminase 23 309 7.3E-110 T 12-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 BEN31_08920 52289a44f44744f53f733b31ff851adb 309 SUPERFAMILY SSF56601 8 309 1.15E-111 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_08920 52289a44f44744f53f733b31ff851adb 309 Gene3D G3DSA:3.40.710.10 4 309 4.8E-111 T 12-10-2018 BEN31_05350 a0543fa992b504f8e6f0eb7ba6f52c3c 448 Pfam PF02378 Phosphotransferase system, EIIC 26 350 5.4E-70 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_05350 a0543fa992b504f8e6f0eb7ba6f52c3c 448 PIRSF PIRSF006351 1 433 2.5E-145 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_05350 a0543fa992b504f8e6f0eb7ba6f52c3c 448 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 9 424 6.5E-165 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_05350 a0543fa992b504f8e6f0eb7ba6f52c3c 448 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 424 6.5E-165 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BEN31_03735 e3429718992f8f3db04ce300971a7bd4 487 SUPERFAMILY SSF54106 435 480 5.62E-6 T 12-10-2018 BEN31_03735 e3429718992f8f3db04ce300971a7bd4 487 Gene3D G3DSA:3.10.350.10 425 487 5.0E-8 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_03735 e3429718992f8f3db04ce300971a7bd4 487 SMART SM00257 436 480 8.2E-6 T 12-10-2018 IPR018392 LysM domain BEN31_03735 e3429718992f8f3db04ce300971a7bd4 487 Pfam PF01476 LysM domain 438 480 1.4E-6 T 12-10-2018 IPR018392 LysM domain BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 555 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 569 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 594 607 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 588 5.2E-14 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Gene3D G3DSA:1.10.287.130 386 461 5.4E-18 T 12-10-2018 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SUPERFAMILY SSF55785 19 96 5.53E-8 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SMART SM00091 5 71 1.2 T 12-10-2018 IPR000014 PAS domain BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SMART SM00091 146 212 1.7E-7 T 12-10-2018 IPR000014 PAS domain BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SMART SM00091 270 336 2.1E-4 T 12-10-2018 IPR000014 PAS domain BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Gene3D G3DSA:3.30.565.10 463 609 1.4E-41 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Gene3D G3DSA:3.30.450.20 265 385 7.5E-11 T 12-10-2018 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SUPERFAMILY SSF55785 255 381 2.26E-10 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Gene3D G3DSA:3.30.450.20 159 264 1.7E-13 T 12-10-2018 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SUPERFAMILY SSF55874 461 607 6.42E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SUPERFAMILY SSF55785 165 266 1.32E-15 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Gene3D G3DSA:3.30.450.20 11 117 6.7E-16 T 12-10-2018 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SMART SM00387 504 609 2.6E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 504 607 1.2E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SMART SM00388 398 461 1.9E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Pfam PF00989 PAS fold 149 247 3.5E-13 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Pfam PF00989 PAS fold 270 380 6.0E-12 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 SUPERFAMILY SSF47384 394 459 6.08E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 Pfam PF00512 His Kinase A (phospho-acceptor) domain 400 460 6.0E-15 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 164 262 4.7E-15 T 12-10-2018 IPR000014 PAS domain BEN31_09320 ffaf8e6518c34f29fbaea6d66c3dcc6a 609 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 267 388 8.5E-9 T 12-10-2018 IPR000014 PAS domain BEN31_07365 91b25094b46b3061cff7886cd142efbd 47 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 1 47 18.377 T 12-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 BEN31_07365 91b25094b46b3061cff7886cd142efbd 47 Pfam PF08177 Small acid-soluble spore protein N family 1 46 6.3E-27 T 12-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 BEN31_11355 f7a90d11b921e3ae3dedc8c043034e49 210 Gene3D G3DSA:2.40.30.170 102 210 1.9E-33 T 12-10-2018 BEN31_11355 f7a90d11b921e3ae3dedc8c043034e49 210 SUPERFAMILY SSF51230 40 111 1.31E-9 T 12-10-2018 IPR011053 Single hybrid motif BEN31_11355 f7a90d11b921e3ae3dedc8c043034e49 210 Gene3D G3DSA:2.40.50.100 47 101 3.4E-6 T 12-10-2018 BEN31_11355 f7a90d11b921e3ae3dedc8c043034e49 210 Pfam PF13437 HlyD family secretion protein 85 201 1.2E-14 T 12-10-2018 BEN31_04580 d8bb578fc10fe69281fb7ff09b5a794f 256 SUPERFAMILY SSF88697 2 71 2.98E-13 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_04580 d8bb578fc10fe69281fb7ff09b5a794f 256 SUPERFAMILY SSF75217 75 251 8.72E-54 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN31_04580 d8bb578fc10fe69281fb7ff09b5a794f 256 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 251 1.7E-75 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BEN31_04580 d8bb578fc10fe69281fb7ff09b5a794f 256 Gene3D G3DSA:3.40.1280.10 1 256 2.0E-92 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN31_04580 d8bb578fc10fe69281fb7ff09b5a794f 256 Pfam PF04452 RNA methyltransferase 20 247 1.0E-74 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BEN31_04580 d8bb578fc10fe69281fb7ff09b5a794f 256 PIRSF PIRSF015601 1 251 3.5E-62 T 12-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 BEN31_15310 560543bd1189caeb15316af165e3ad78 285 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 27 42 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_15310 560543bd1189caeb15316af165e3ad78 285 Gene3D G3DSA:3.20.20.20 8 282 2.7E-113 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_15310 560543bd1189caeb15316af165e3ad78 285 Pfam PF00809 Pterin binding enzyme 28 261 1.4E-87 T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_15310 560543bd1189caeb15316af165e3ad78 285 SUPERFAMILY SSF51717 16 278 1.44E-99 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_15310 560543bd1189caeb15316af165e3ad78 285 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 61 74 - T 12-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_15310 560543bd1189caeb15316af165e3ad78 285 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 27 276 3.8E-102 T 12-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Pfam PF02785 Biotin carboxylase C-terminal domain 346 453 1.1E-31 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Gene3D G3DSA:3.20.20.70 514 818 1.5E-289 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 SMART SM00878 346 453 6.4E-51 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Gene3D G3DSA:3.10.600.10 508 1061 1.5E-289 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Pfam PF00682 HMGL-like 534 806 1.0E-28 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 114 4.5E-42 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Gene3D G3DSA:1.10.472.90 819 943 1.5E-289 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 SUPERFAMILY SSF56059 88 333 1.77E-71 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 8 1145 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Gene3D G3DSA:1.10.10.2790 944 979 1.5E-289 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Pfam PF02436 Conserved carboxylase domain 829 1029 5.7E-81 T 12-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 PIRSF PIRSF001594 1 1147 0.0 T 12-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 SUPERFAMILY SSF51246 341 460 2.15E-37 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 SUPERFAMILY SSF52440 4 117 2.09E-44 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Gene3D G3DSA:3.10.600.10 464 506 3.9E-8 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Pfam PF00364 Biotin-requiring enzyme 1079 1145 3.5E-15 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Gene3D G3DSA:3.30.470.130 1 461 6.0E-196 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 SUPERFAMILY SSF89000 834 1011 1.14E-59 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Gene3D G3DSA:2.40.50.100 1069 1146 8.9E-23 T 12-10-2018 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 326 7.5E-81 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 SUPERFAMILY SSF51230 1070 1145 4.97E-20 T 12-10-2018 IPR011053 Single hybrid motif BEN31_08905 c1382b6b22de3b9eceff18123725d18b 1148 SUPERFAMILY SSF51569 526 837 3.3E-81 T 12-10-2018 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 SUPERFAMILY SSF50037 280 324 1.88E-5 T 12-10-2018 IPR008988 Transcriptional repressor, C-terminal BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 86 323 1.7E-74 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 Pfam PF03099 Biotin/lipoate A/B protein ligase family 101 214 8.6E-18 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 SUPERFAMILY SSF55681 72 277 9.11E-62 T 12-10-2018 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 SUPERFAMILY SSF46785 6 62 7.26E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 Gene3D G3DSA:3.30.930.10 72 278 4.7E-68 T 12-10-2018 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 Gene3D G3DSA:1.10.10.10 2 65 2.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 325 37.124 T 12-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 Gene3D G3DSA:2.30.30.100 280 327 8.4E-8 T 12-10-2018 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 Pfam PF08279 HTH domain 7 60 1.0E-14 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_06060 472d0f8d9b78c2af88b428ad0d8aa885 327 Pfam PF02237 Biotin protein ligase C terminal domain 279 323 2.7E-10 T 12-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_01780 00a067c7dbbb0c7b8aac498d1ce46b31 129 SUPERFAMILY SSF54637 7 128 3.56E-32 T 12-10-2018 IPR029069 HotDog domain superfamily BEN31_01780 00a067c7dbbb0c7b8aac498d1ce46b31 129 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 9 125 5.1E-39 T 12-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 BEN31_01780 00a067c7dbbb0c7b8aac498d1ce46b31 129 Pfam PF03061 Thioesterase superfamily 39 115 5.6E-17 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN31_01780 00a067c7dbbb0c7b8aac498d1ce46b31 129 Gene3D G3DSA:3.10.129.10 1 129 8.0E-51 T 12-10-2018 BEN31_13145 7e5d4734577aa6317633782e81003cc3 121 Gene3D G3DSA:3.90.1150.30 1 121 3.8E-47 T 12-10-2018 IPR038056 YjbR-like superfamily BEN31_13145 7e5d4734577aa6317633782e81003cc3 121 SUPERFAMILY SSF142906 1 116 1.14E-41 T 12-10-2018 IPR038056 YjbR-like superfamily BEN31_13145 7e5d4734577aa6317633782e81003cc3 121 Pfam PF04237 YjbR 11 103 2.9E-26 T 12-10-2018 IPR007351 Uncharacterised protein YjbR BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 SUPERFAMILY SSF46977 416 512 3.79E-27 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 Gene3D G3DSA:1.20.58.100 388 495 1.2E-19 T 12-10-2018 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 Pfam PF00890 FAD binding domain 13 377 8.3E-81 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 11 494 1.5E-170 T 12-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 Gene3D G3DSA:3.50.50.60 13 387 1.3E-131 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 340 362 1.5E-5 T 12-10-2018 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 1.5E-5 T 12-10-2018 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 Pfam PF02910 Fumarate reductase flavoprotein C-term 419 508 7.6E-17 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 Gene3D G3DSA:3.90.700.10 237 343 1.3E-131 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 PIRSF PIRSF000171 6 526 1.0E-32 T 12-10-2018 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 SUPERFAMILY SSF56425 227 337 5.83E-30 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03860 a7b2e7940dfd7f248e9e6680ccba90ac 529 SUPERFAMILY SSF51905 13 400 2.89E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06180 fe06a8e25cea21f1b76da78689154165 101 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 97 24.007 T 12-10-2018 IPR011229 Cell cycle protein GpsB BEN31_06180 fe06a8e25cea21f1b76da78689154165 101 Pfam PF05103 DivIVA protein 8 67 6.4E-15 T 12-10-2018 IPR007793 DivIVA family BEN31_06180 fe06a8e25cea21f1b76da78689154165 101 PIRSF PIRSF029938 1 101 3.6E-40 T 12-10-2018 IPR011229 Cell cycle protein GpsB BEN31_06180 fe06a8e25cea21f1b76da78689154165 101 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 9.0E-15 T 12-10-2018 IPR019933 DivIVA domain BEN31_04110 cffbb28d15312f24456364f8cd4b78aa 472 Pfam PF00501 AMP-binding enzyme 2 374 1.3E-50 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_04110 cffbb28d15312f24456364f8cd4b78aa 472 SUPERFAMILY SSF56801 2 467 1.03E-93 T 12-10-2018 BEN31_04110 cffbb28d15312f24456364f8cd4b78aa 472 Pfam PF13193 AMP-binding enzyme C-terminal domain 383 454 5.7E-13 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_04110 cffbb28d15312f24456364f8cd4b78aa 472 Gene3D G3DSA:3.30.300.310 372 470 4.2E-22 T 12-10-2018 BEN31_04110 cffbb28d15312f24456364f8cd4b78aa 472 ProSitePatterns PS00455 Putative AMP-binding domain signature. 137 148 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_04110 cffbb28d15312f24456364f8cd4b78aa 472 Gene3D G3DSA:3.40.50.12780 1 371 2.7E-65 T 12-10-2018 BEN31_17045 0b81779a74eb06d17f6a6483278a9926 360 SUPERFAMILY SSF55920 132 338 4.06E-19 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN31_17045 0b81779a74eb06d17f6a6483278a9926 360 Gene3D G3DSA:3.40.350.10 2 118 1.8E-10 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN31_17045 0b81779a74eb06d17f6a6483278a9926 360 SUPERFAMILY SSF53092 2 106 7.5E-10 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN31_17045 0b81779a74eb06d17f6a6483278a9926 360 Gene3D G3DSA:3.90.230.10 126 337 2.9E-17 T 12-10-2018 BEN31_17045 0b81779a74eb06d17f6a6483278a9926 360 Pfam PF01321 Creatinase/Prolidase N-terminal domain 2 105 2.3E-11 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 BEN31_17045 0b81779a74eb06d17f6a6483278a9926 360 Pfam PF00557 Metallopeptidase family M24 141 325 3.8E-9 T 12-10-2018 IPR000994 Peptidase M24 BEN31_04245 1eca115ccae8db48122e0e96c030f7a9 254 Pfam PF00005 ABC transporter 17 168 3.7E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_04245 1eca115ccae8db48122e0e96c030f7a9 254 SUPERFAMILY SSF52540 1 238 7.8E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04245 1eca115ccae8db48122e0e96c030f7a9 254 SMART SM00382 26 216 6.3E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_04245 1eca115ccae8db48122e0e96c030f7a9 254 PIRSF PIRSF039085 1 244 4.8E-101 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BEN31_04245 1eca115ccae8db48122e0e96c030f7a9 254 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_04245 1eca115ccae8db48122e0e96c030f7a9 254 Gene3D G3DSA:3.40.50.300 1 246 5.7E-77 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:3.30.70.1440 657 851 5.8E-224 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 SUPERFAMILY SSF82866 793 1013 4.84E-45 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 SUPERFAMILY SSF82693 134 316 8.24E-7 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:1.20.1640.10 500 1008 5.8E-224 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Pfam PF00873 AcrB/AcrD/AcrF family 1 1010 2.0E-160 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:1.20.1640.10 11 499 5.8E-224 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:3.30.70.1430 38 805 5.8E-224 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 SUPERFAMILY SSF82693 553 648 2.09E-5 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 SUPERFAMILY SSF82693 39 129 1.92E-18 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.3E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.3E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 PRINTS PR00702 Acriflavin resistance protein family signature 325 348 3.3E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 PRINTS PR00702 Acriflavin resistance protein family signature 379 403 3.3E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 PRINTS PR00702 Acriflavin resistance protein family signature 457 480 3.3E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 PRINTS PR00702 Acriflavin resistance protein family signature 432 455 3.3E-28 T 12-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:3.30.70.1320 132 319 5.8E-224 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 SUPERFAMILY SSF82866 287 480 1.01E-33 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:3.30.2090.10 704 797 5.8E-224 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:3.30.70.1430 555 656 5.8E-224 T 12-10-2018 BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 Gene3D G3DSA:3.30.2090.10 176 267 5.8E-224 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN31_07780 f5f8f4f7b20fc96e29091f2ccbd99e9f 1014 SUPERFAMILY SSF82714 180 259 4.32E-5 T 12-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PIRSF PIRSF000724 1 394 7.4E-161 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 Gene3D G3DSA:3.40.50.1260 169 383 2.1E-165 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 12-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 SUPERFAMILY SSF53748 1 393 3.42E-164 T 12-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 43.094 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 Pfam PF00162 Phosphoglycerate kinase 6 383 6.7E-166 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 3.7E-97 T 12-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00585 0a23be390560467fcefd843fab4b99e1 394 Gene3D G3DSA:3.40.50.1260 7 391 2.1E-165 T 12-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_13700 46c7ef991da40059d0f780d9b2a5d815 480 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 393 477 1.3E-13 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_13700 46c7ef991da40059d0f780d9b2a5d815 480 Pfam PF02378 Phosphotransferase system, EIIC 20 278 1.5E-17 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_13700 46c7ef991da40059d0f780d9b2a5d815 480 Gene3D G3DSA:3.40.50.2300 379 480 6.1E-39 T 12-10-2018 BEN31_13700 46c7ef991da40059d0f780d9b2a5d815 480 SUPERFAMILY SSF52794 391 480 1.11E-27 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_13700 46c7ef991da40059d0f780d9b2a5d815 480 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 10 348 4.7E-178 T 12-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 BEN31_16500 25e7e59c5b052fee531e09df4397cca9 314 Pfam PF04545 Sigma-70, region 4 14 47 5.2E-6 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_16500 25e7e59c5b052fee531e09df4397cca9 314 SUPERFAMILY SSF100950 56 312 6.05E-78 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_16500 25e7e59c5b052fee531e09df4397cca9 314 Gene3D G3DSA:1.10.10.60 1 51 2.3E-20 T 12-10-2018 BEN31_16500 25e7e59c5b052fee531e09df4397cca9 314 SUPERFAMILY SSF88659 13 47 1.7E-7 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_16500 25e7e59c5b052fee531e09df4397cca9 314 Gene3D G3DSA:3.40.50.1360 52 312 6.7E-90 T 12-10-2018 BEN31_16500 25e7e59c5b052fee531e09df4397cca9 314 Pfam PF04198 Putative sugar-binding domain 57 311 6.3E-84 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 BEN31_15170 c281edd911eddc5d645c9afde1be1b2e 229 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 224 1.7E-80 T 12-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN31_15170 c281edd911eddc5d645c9afde1be1b2e 229 Gene3D G3DSA:3.90.550.10 2 228 2.0E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_15170 c281edd911eddc5d645c9afde1be1b2e 229 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 223 2.6E-78 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN31_15170 c281edd911eddc5d645c9afde1be1b2e 229 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 12-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN31_15170 c281edd911eddc5d645c9afde1be1b2e 229 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 223 42.058 T 12-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 BEN31_15170 c281edd911eddc5d645c9afde1be1b2e 229 SUPERFAMILY SSF53448 5 223 5.18E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_05175 c508e7a7ac65156d5cad7e4f1a04b834 577 Gene3D G3DSA:3.40.50.300 1 234 8.6E-43 T 12-10-2018 BEN31_05175 c508e7a7ac65156d5cad7e4f1a04b834 577 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 524 3.7E-15 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BEN31_05175 c508e7a7ac65156d5cad7e4f1a04b834 577 SUPERFAMILY SSF52540 1 218 1.69E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05175 c508e7a7ac65156d5cad7e4f1a04b834 577 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 568 9.2E-205 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BEN31_05175 c508e7a7ac65156d5cad7e4f1a04b834 577 SUPERFAMILY SSF52540 4 523 7.67E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05175 c508e7a7ac65156d5cad7e4f1a04b834 577 Gene3D G3DSA:3.40.50.300 248 569 1.4E-54 T 12-10-2018 BEN31_05175 c508e7a7ac65156d5cad7e4f1a04b834 577 PIRSF PIRSF003128 1 573 1.1E-189 T 12-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 SMART SM00304 208 260 1.1E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 SUPERFAMILY SSF58104 228 563 3.01E-65 T 12-10-2018 BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 Gene3D G3DSA:1.20.1480.50 171 266 1.2E-8 T 12-10-2018 BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 SMART SM00283 275 564 8.7E-76 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 SUPERFAMILY SSF103190 72 183 1.7E-9 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 515 1.8E-44 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 Pfam PF17202 Single cache domain 3 80 183 1.2E-31 T 12-10-2018 IPR033463 Single cache domain 3 BEN31_13950 4b3119d284184392e4776fe8ba35e39f 565 Gene3D G3DSA:1.10.287.950 269 564 9.3E-65 T 12-10-2018 BEN31_13565 ece88f04b09240fd4764755731f50566 224 SMART SM00895 84 209 3.3E-15 T 12-10-2018 IPR011711 GntR, C-terminal BEN31_13565 ece88f04b09240fd4764755731f50566 224 Pfam PF07729 FCD domain 84 208 2.1E-22 T 12-10-2018 IPR011711 GntR, C-terminal BEN31_13565 ece88f04b09240fd4764755731f50566 224 SMART SM00345 16 74 7.9E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13565 ece88f04b09240fd4764755731f50566 224 Gene3D G3DSA:1.10.10.10 11 74 5.9E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13565 ece88f04b09240fd4764755731f50566 224 SUPERFAMILY SSF46785 6 78 1.24E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13565 ece88f04b09240fd4764755731f50566 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 5.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13565 ece88f04b09240fd4764755731f50566 224 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 5.2E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13565 ece88f04b09240fd4764755731f50566 224 SUPERFAMILY SSF48008 80 214 2.04E-23 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN31_13565 ece88f04b09240fd4764755731f50566 224 Gene3D G3DSA:1.20.120.530 78 223 2.3E-25 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN31_13565 ece88f04b09240fd4764755731f50566 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 74 6.4E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13195 5ce396cbe8408e9e2081f40b7b95605c 112 Pfam PF01638 HxlR-like helix-turn-helix 19 109 1.2E-24 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_13195 5ce396cbe8408e9e2081f40b7b95605c 112 Gene3D G3DSA:1.10.10.10 1 112 2.6E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13195 5ce396cbe8408e9e2081f40b7b95605c 112 SUPERFAMILY SSF46785 8 107 4.44E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF56801 1491 2014 1.44E-137 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SMART SM00823 Phosphopantetheine attachment site 964 1032 0.0024 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SMART SM00823 Phosphopantetheine attachment site 3021 3089 0.012 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SMART SM00823 Phosphopantetheine attachment site 2001 2070 0.0071 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 191 453 1.56E-50 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.30 1218 1464 1.6E-140 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF56801 428 972 1.44E-146 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 1221 1467 5.78E-59 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF47336 3013 3086 1.31E-19 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3405 3555 6.1E-46 T 12-10-2018 IPR010060 Non-ribosomal peptide synthase BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.30 3268 3537 9.9E-67 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00501 AMP-binding enzyme 1497 1894 7.3E-100 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00501 AMP-binding enzyme 2539 2916 1.1E-87 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00501 AMP-binding enzyme 471 858 1.9E-94 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 12 189 2.3E-42 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.10 1054 1408 1.6E-140 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 3284 3535 9.0E-34 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 605 616 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.30 191 446 1.2E-128 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00550 Phosphopantetheine attachment site 966 1028 2.2E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00550 Phosphopantetheine attachment site 3024 3081 3.8E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00550 Phosphopantetheine attachment site 2003 2066 6.0E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.30 2255 2501 3.1E-138 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 3104 3277 3.11E-36 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 ProSitePatterns PS00012 Phosphopantetheine attachment site. 987 1002 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.10 2087 2445 3.1E-138 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 2259 2499 3.19E-55 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2557 2940 3.9E-122 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1518 1918 5.2E-128 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 490 882 5.5E-129 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00668 Condensation domain 1046 1475 4.8E-129 T 12-10-2018 IPR001242 Condensation domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00668 Condensation domain 2082 2515 1.2E-123 T 12-10-2018 IPR001242 Condensation domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00668 Condensation domain 3099 3547 7.5E-110 T 12-10-2018 IPR001242 Condensation domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF00668 Condensation domain 7 449 2.1E-126 T 12-10-2018 IPR001242 Condensation domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF47336 1995 2098 5.89E-20 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 2089 2251 1.33E-43 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.40.50.1820 955 1053 1.8E-21 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.300.30 853 954 3.7E-28 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.300.30 2911 3009 3.0E-31 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.300.30 1889 1990 1.4E-21 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.10 12 381 1.2E-128 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2673 2684 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:1.10.1200.10 1991 2072 2.0E-26 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF47336 959 1061 1.44E-14 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1636 1647 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF56801 2494 3034 6.15E-148 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Pfam PF13193 AMP-binding enzyme C-terminal domain 2924 2995 2.2E-11 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.30.559.10 3089 3267 1.3E-57 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:1.10.1200.10 3010 3088 9.5E-24 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 SUPERFAMILY SSF52777 1052 1214 1.93E-43 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.40.50.12780 2522 2910 2.4E-122 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.40.50.12780 1482 1888 1.2E-130 T 12-10-2018 BEN31_13900 fb78d645b6151bc718adc315238afbf8 3564 Gene3D G3DSA:3.40.50.12780 455 852 2.6E-134 T 12-10-2018 BEN31_06175 fffc2f757bd56a0bf8390ff991c15bb4 180 Gene3D G3DSA:3.40.50.450 1 176 5.6E-67 T 12-10-2018 BEN31_06175 fffc2f757bd56a0bf8390ff991c15bb4 180 PIRSF PIRSF021290 1 176 2.8E-69 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 BEN31_06175 fffc2f757bd56a0bf8390ff991c15bb4 180 Hamap MF_01575 UPF0398 protein . 1 174 35.163 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 BEN31_06175 fffc2f757bd56a0bf8390ff991c15bb4 180 SUPERFAMILY SSF102405 1 171 2.38E-62 T 12-10-2018 BEN31_06175 fffc2f757bd56a0bf8390ff991c15bb4 180 Pfam PF06908 Protein of unknown function (DUF1273) 4 168 4.4E-70 T 12-10-2018 IPR010697 Protein of unknown function DUF1273 BEN31_09665 461ed8a3581be890656a378dac2d78af 138 Pfam PF02566 OsmC-like protein 40 135 3.1E-20 T 12-10-2018 IPR003718 OsmC/Ohr family BEN31_09665 461ed8a3581be890656a378dac2d78af 138 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 136 2.9E-51 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 BEN31_09665 461ed8a3581be890656a378dac2d78af 138 Gene3D G3DSA:3.30.300.20 44 137 2.1E-34 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_09665 461ed8a3581be890656a378dac2d78af 138 Gene3D G3DSA:2.20.25.10 3 43 3.6E-17 T 12-10-2018 BEN31_09665 461ed8a3581be890656a378dac2d78af 138 SUPERFAMILY SSF82784 4 136 1.2E-39 T 12-10-2018 IPR036102 OsmC/Ohr superfamily BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 456 8.4E-37 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 3.2E-76 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 SUPERFAMILY SSF51905 7 340 2.82E-67 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 Gene3D G3DSA:3.50.50.60 152 273 2.4E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 Gene3D G3DSA:3.30.390.30 348 468 6.5E-42 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.8E-42 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.8E-42 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.8E-42 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.8E-42 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.8E-42 T 12-10-2018 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 2.4E-179 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 1.0E-73 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 Gene3D G3DSA:3.50.50.60 13 335 2.4E-128 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 PIRSF PIRSF000350 3 457 1.2E-97 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 SUPERFAMILY SSF55424 346 468 2.06E-40 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_09000 3ed694dbd484bfe178eba7788f676e0b 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 Pfam PF13229 Right handed beta helix region 407 544 1.4E-9 T 12-10-2018 IPR039448 Right handed beta helix domain BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SUPERFAMILY SSF51126 138 474 1.3E-20 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SUPERFAMILY SSF51126 425 624 4.24E-10 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 511 533 5.2 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 486 508 5000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 237 260 2700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 409 432 630.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 463 485 22.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 261 291 3200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 366 387 130.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 439 462 520.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 SMART SM00710 309 345 2900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00325 83f553674315cc9a8d5647a878690a4b 626 Gene3D G3DSA:2.160.20.10 137 506 6.1E-59 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 325 3.4E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 SUPERFAMILY SSF55874 175 323 3.14E-31 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 7.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 7.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 7.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 323 7.2E-8 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 Gene3D G3DSA:1.10.287.130 123 169 2.9E-34 T 12-10-2018 BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 Gene3D G3DSA:3.30.565.10 170 323 2.9E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 SMART SM00387 216 326 6.4E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_03070 213c010aa72b988747074db8d43dbcd9 334 SUPERFAMILY SSF47384 102 164 6.28E-5 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_16760 4815766dcafecb1d3bb2b2105b892b39 152 Gene3D G3DSA:2.60.40.1850 24 151 3.2E-41 T 12-10-2018 BEN31_16760 4815766dcafecb1d3bb2b2105b892b39 152 SUPERFAMILY SSF158911 17 150 5.1E-39 T 12-10-2018 IPR037250 NEAT domain superfamily BEN31_16760 4815766dcafecb1d3bb2b2105b892b39 152 SMART SM00725 33 152 1.0E-33 T 12-10-2018 IPR006635 NEAT domain BEN31_16760 4815766dcafecb1d3bb2b2105b892b39 152 Pfam PF05031 Iron Transport-associated domain 33 147 2.3E-33 T 12-10-2018 IPR006635 NEAT domain BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 SUPERFAMILY SSF103491 2 420 8.5E-126 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 429 28.992 T 12-10-2018 IPR026593 Protein translocase subunit SecY BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PIRSF PIRSF004557 1 430 1.2E-123 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 425 1.9E-149 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 Gene3D G3DSA:1.10.3370.10 1 425 1.5E-154 T 12-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 309 331 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 364 382 6.4E-101 T 12-10-2018 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 12-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_14945 038c32591fd4747a35ba9ff3cacc27f5 430 Pfam PF00344 SecY translocase 68 413 7.5E-108 T 12-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_12800 bf99127e643374965f590447000741e7 299 Pfam PF01545 Cation efflux family 15 206 1.5E-50 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN31_12800 bf99127e643374965f590447000741e7 299 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 288 1.9E-75 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN31_12800 bf99127e643374965f590447000741e7 299 Gene3D G3DSA:3.30.70.1350 212 287 3.6E-16 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BEN31_12800 bf99127e643374965f590447000741e7 299 Pfam PF16916 Dimerisation domain of Zinc Transporter 215 287 1.1E-17 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BEN31_12800 bf99127e643374965f590447000741e7 299 SUPERFAMILY SSF161111 8 208 2.35E-54 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN31_12800 bf99127e643374965f590447000741e7 299 SUPERFAMILY SSF160240 214 288 1.27E-19 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BEN31_12800 bf99127e643374965f590447000741e7 299 Gene3D G3DSA:1.20.1510.10 11 207 2.6E-54 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN31_07220 dec23a47ca4764115cfab0055b92edba 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 4.6E-22 T 12-10-2018 BEN31_07220 dec23a47ca4764115cfab0055b92edba 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 4.6E-22 T 12-10-2018 BEN31_07220 dec23a47ca4764115cfab0055b92edba 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 4.6E-22 T 12-10-2018 BEN31_07220 dec23a47ca4764115cfab0055b92edba 389 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 4.6E-22 T 12-10-2018 BEN31_07220 dec23a47ca4764115cfab0055b92edba 389 Pfam PF01494 FAD binding domain 10 332 4.1E-22 T 12-10-2018 IPR002938 FAD-binding domain GO:0071949 BEN31_07220 dec23a47ca4764115cfab0055b92edba 389 Gene3D G3DSA:3.50.50.60 6 381 7.5E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_07220 dec23a47ca4764115cfab0055b92edba 389 SUPERFAMILY SSF51905 9 374 5.07E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_17985 0d5fda26d56f44f785c78642e339915a 465 Pfam PF00535 Glycosyl transferase family 2 6 173 2.0E-27 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_17985 0d5fda26d56f44f785c78642e339915a 465 Gene3D G3DSA:3.40.50.150 253 460 5.6E-40 T 12-10-2018 BEN31_17985 0d5fda26d56f44f785c78642e339915a 465 SUPERFAMILY SSF53448 4 251 9.09E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17985 0d5fda26d56f44f785c78642e339915a 465 Gene3D G3DSA:3.90.550.10 1 226 9.8E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17985 0d5fda26d56f44f785c78642e339915a 465 SUPERFAMILY SSF53335 251 416 7.17E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_17985 0d5fda26d56f44f785c78642e339915a 465 Pfam PF13489 Methyltransferase domain 258 401 1.2E-18 T 12-10-2018 BEN31_12115 c200312a385b7796846f6c2347caf64c 454 Pfam PF02378 Phosphotransferase system, EIIC 10 294 1.8E-79 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_12115 c200312a385b7796846f6c2347caf64c 454 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 353 437 4.8E-17 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BEN31_12115 c200312a385b7796846f6c2347caf64c 454 SUPERFAMILY SSF55604 378 450 4.18E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_12115 c200312a385b7796846f6c2347caf64c 454 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 390 407 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_12115 c200312a385b7796846f6c2347caf64c 454 Pfam PF00367 phosphotransferase system, EIIB 381 412 1.9E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_12115 c200312a385b7796846f6c2347caf64c 454 Gene3D G3DSA:3.30.1360.60 378 451 2.6E-24 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_12115 c200312a385b7796846f6c2347caf64c 454 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 448 1.9E-177 T 12-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 SMART SM01005 248 373 6.3E-71 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 Pfam PF01168 Alanine racemase, N-terminal domain 14 233 6.8E-70 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 Pfam PF00842 Alanine racemase, C-terminal domain 248 372 3.2E-45 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 Gene3D G3DSA:3.20.20.10 16 238 1.1E-136 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 TIGRFAM TIGR00492 alr: alanine racemase 8 373 3.0E-136 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 Hamap MF_01201 Alanine racemase. 7 373 36.013 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 SUPERFAMILY SSF51419 14 244 3.76E-66 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 Gene3D G3DSA:2.40.37.10 14 370 1.1E-136 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 301 318 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 355 368 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 33 49 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 264 279 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 131 143 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 281 296 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 206 233 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 166 177 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 PRINTS PR00992 Alanine racemase signature 69 87 1.6E-72 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_13355 7953203dd40ab9952d367ac6b5db7eb0 393 SUPERFAMILY SSF50621 243 383 6.63E-51 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 Pfam PF13393 Histidyl-tRNA synthetase 8 312 1.7E-48 T 12-10-2018 BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 34.43 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 PIRSF PIRSF001549 1 422 1.8E-120 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 Gene3D G3DSA:3.30.930.10 2 323 1.2E-115 T 12-10-2018 BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 Pfam PF03129 Anticodon binding domain 332 420 8.3E-18 T 12-10-2018 IPR004154 Anticodon-binding BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 410 1.3E-156 T 12-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 SUPERFAMILY SSF55681 4 317 7.28E-96 T 12-10-2018 BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 Gene3D G3DSA:3.40.50.800 325 418 3.1E-27 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BEN31_03995 cf429dcf1ff25879f724afc16488d63e 424 SUPERFAMILY SSF52954 329 419 1.81E-25 T 12-10-2018 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 Gene3D G3DSA:3.50.50.60 8 301 5.2E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 305 5.3E-121 T 12-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.0E-35 T 12-10-2018 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 7.0E-35 T 12-10-2018 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 7.0E-35 T 12-10-2018 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 7.0E-35 T 12-10-2018 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 7.0E-35 T 12-10-2018 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 SUPERFAMILY SSF51905 4 302 2.54E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 Gene3D G3DSA:3.50.50.60 117 240 5.2E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 294 9.0E-51 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 12-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_18615 feab28874d40ff98d35085f4ab0d82cb 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 5.2E-71 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_05285 0fc4dd9735b5eae74067f3078ac32ea9 169 Pfam PF03734 L,D-transpeptidase catalytic domain 28 151 8.2E-20 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BEN31_05285 0fc4dd9735b5eae74067f3078ac32ea9 169 SUPERFAMILY SSF141523 26 151 6.28E-31 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BEN31_05285 0fc4dd9735b5eae74067f3078ac32ea9 169 Gene3D G3DSA:2.40.440.10 9 168 7.1E-39 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BEN31_11970 45b894fc00c43220280c868b768bde5d 239 Gene3D G3DSA:3.30.70.980 131 201 3.2E-48 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_11970 45b894fc00c43220280c868b768bde5d 239 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 58.573 T 12-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN BEN31_11970 45b894fc00c43220280c868b768bde5d 239 Pfam PF01709 Transcriptional regulator 4 235 1.2E-82 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_11970 45b894fc00c43220280c868b768bde5d 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 32.522 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_11970 45b894fc00c43220280c868b768bde5d 239 Gene3D G3DSA:3.30.70.980 83 234 3.2E-48 T 12-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_11970 45b894fc00c43220280c868b768bde5d 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 1.2E-74 T 12-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_11970 45b894fc00c43220280c868b768bde5d 239 SUPERFAMILY SSF75625 1 238 5.23E-83 T 12-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_11970 45b894fc00c43220280c868b768bde5d 239 Gene3D G3DSA:1.10.10.200 2 78 2.8E-23 T 12-10-2018 IPR017856 Integrase-like, N-terminal BEN31_13915 2e4dfa1d5285a5799d2635e043003d93 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 283 1.7E-7 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_13915 2e4dfa1d5285a5799d2635e043003d93 289 SUPERFAMILY SSF161098 6 284 3.18E-54 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_13915 2e4dfa1d5285a5799d2635e043003d93 289 Gene3D G3DSA:1.10.3720.10 10 286 2.4E-56 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_02090 0397f1cc4354f397fd7586d6826a27fe 172 Gene3D G3DSA:1.10.10.10 93 166 2.5E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_02090 0397f1cc4354f397fd7586d6826a27fe 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 11 162 6.5E-14 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_02090 0397f1cc4354f397fd7586d6826a27fe 172 SUPERFAMILY SSF88659 108 165 5.67E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_02090 0397f1cc4354f397fd7586d6826a27fe 172 SMART SM00421 113 171 0.0073 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_02090 0397f1cc4354f397fd7586d6826a27fe 172 Pfam PF08281 Sigma-70, region 4 108 159 1.7E-13 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 Pfam PF13382 Adenine deaminase C-terminal domain 401 570 5.5E-63 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 SUPERFAMILY SSF51338 11 355 1.7E-17 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 Gene3D G3DSA:2.30.40.10 12 350 6.4E-125 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 Gene3D G3DSA:3.20.20.140 70 313 6.4E-125 T 12-10-2018 BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 SUPERFAMILY SSF51556 70 318 1.48E-44 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 Pfam PF01979 Amidohydrolase family 66 349 7.4E-37 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 TIGRFAM TIGR01178 ade: adenine deaminase 21 572 6.5E-224 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BEN31_09050 f532d8e79a630ed4822bcfae38b69f7c 576 Hamap MF_01518 Adenine deaminase [ade]. 20 573 38.867 T 12-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BEN31_08425 57968fa3635758e238fa3a737b086609 360 PIRSF PIRSF006004 7 360 4.7E-141 T 12-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 BEN31_08425 57968fa3635758e238fa3a737b086609 360 Pfam PF13394 4Fe-4S single cluster domain 122 228 1.9E-6 T 12-10-2018 BEN31_08425 57968fa3635758e238fa3a737b086609 360 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 11 360 1.2E-169 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BEN31_08425 57968fa3635758e238fa3a737b086609 360 SUPERFAMILY SSF102114 109 329 6.8E-14 T 12-10-2018 BEN31_08425 57968fa3635758e238fa3a737b086609 360 Pfam PF04055 Radical SAM superfamily 117 287 6.6E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_08425 57968fa3635758e238fa3a737b086609 360 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 14 356 73.957 T 12-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 BEN31_08425 57968fa3635758e238fa3a737b086609 360 Gene3D G3DSA:3.20.20.70 77 341 1.5E-99 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_08425 57968fa3635758e238fa3a737b086609 360 Gene3D G3DSA:1.10.150.530 16 75 3.1E-23 T 12-10-2018 BEN31_09955 e894286738362f0065fdd0c22229584b 393 Pfam PF00842 Alanine racemase, C-terminal domain 250 377 9.5E-41 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 Hamap MF_01201 Alanine racemase. 5 378 33.711 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 TIGRFAM TIGR00492 alr: alanine racemase 6 377 7.7E-136 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 SUPERFAMILY SSF50621 245 385 7.32E-47 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 67 85 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 208 235 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 267 282 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 360 373 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 284 299 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 31 47 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 130 142 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 165 176 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 PRINTS PR00992 Alanine racemase signature 305 322 6.5E-65 T 12-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 Gene3D G3DSA:2.40.37.10 240 393 5.4E-56 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN31_09955 e894286738362f0065fdd0c22229584b 393 SMART SM01005 250 378 5.1E-60 T 12-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 12-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 Gene3D G3DSA:3.20.20.10 14 230 2.6E-70 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_09955 e894286738362f0065fdd0c22229584b 393 Pfam PF01168 Alanine racemase, N-terminal domain 12 235 1.4E-63 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_09955 e894286738362f0065fdd0c22229584b 393 SUPERFAMILY SSF51419 12 251 1.4E-62 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_10145 48eb5142d55c8e4026f48f61add9411a 128 Pfam PF07552 Spore Coat Protein X and V domain 71 127 8.5E-14 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 BEN31_10145 48eb5142d55c8e4026f48f61add9411a 128 Pfam PF07552 Spore Coat Protein X and V domain 6 63 8.1E-17 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Gene3D G3DSA:3.40.50.740 426 551 3.4E-56 T 12-10-2018 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 SUPERFAMILY SSF50692 605 777 6.63E-34 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Pfam PF00384 Molybdopterin oxidoreductase 60 545 5.0E-44 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 SMART SM00926 5 57 9.8E-10 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Gene3D G3DSA:3.40.50.740 77 140 4.1E-52 T 12-10-2018 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 11 57 1.2E-6 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Pfam PF01568 Molydopterin dinucleotide binding domain 649 769 1.5E-23 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Gene3D G3DSA:2.40.40.20 622 777 3.9E-35 T 12-10-2018 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 SUPERFAMILY SSF53706 7 628 1.83E-142 T 12-10-2018 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Gene3D G3DSA:3.30.2070.10 501 589 3.4E-56 T 12-10-2018 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Gene3D G3DSA:3.40.228.10 295 618 3.4E-56 T 12-10-2018 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Gene3D G3DSA:2.20.25.90 2 61 1.4E-11 T 12-10-2018 BEN31_13220 a77a5dfe0f6cd9ceba4b95a1bbff1ebe 777 Gene3D G3DSA:3.40.228.10 141 250 4.1E-52 T 12-10-2018 BEN31_18380 0702774997f6d791a2cf1a36166c5f22 228 SUPERFAMILY SSF52540 1 221 1.06E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18380 0702774997f6d791a2cf1a36166c5f22 228 SMART SM00382 27 221 1.9E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_18380 0702774997f6d791a2cf1a36166c5f22 228 Pfam PF00005 ABC transporter 19 165 5.3E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_18380 0702774997f6d791a2cf1a36166c5f22 228 Gene3D G3DSA:3.40.50.300 1 224 2.7E-66 T 12-10-2018 BEN31_18380 0702774997f6d791a2cf1a36166c5f22 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 2.3E-88 T 12-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 BEN31_18380 0702774997f6d791a2cf1a36166c5f22 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_10305 c3cbe23b3f74a0a1496e03d336449b4f 306 SMART SM00382 34 228 2.1E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_10305 c3cbe23b3f74a0a1496e03d336449b4f 306 SUPERFAMILY SSF52540 5 250 5.08E-76 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10305 c3cbe23b3f74a0a1496e03d336449b4f 306 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 276 5.7E-8 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_10305 c3cbe23b3f74a0a1496e03d336449b4f 306 Pfam PF00005 ABC transporter 26 178 2.0E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_10305 c3cbe23b3f74a0a1496e03d336449b4f 306 Gene3D G3DSA:3.40.50.300 3 305 6.1E-93 T 12-10-2018 BEN31_10305 c3cbe23b3f74a0a1496e03d336449b4f 306 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 158 1.2E-29 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 Gene3D G3DSA:1.10.10.10 73 158 2.5E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 Gene3D G3DSA:3.30.160.70 1 71 1.1E-17 T 12-10-2018 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 5 157 40.027 T 12-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 126 132 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 77 156 2.2E-34 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 SUPERFAMILY SSF53155 2 81 2.16E-17 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 SUPERFAMILY SSF46767 75 159 1.83E-29 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BEN31_09515 efe32f51859091fac7e45c7595b71ef1 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 1 73 4.8E-13 T 12-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN31_14965 60fadf5662ba377efda51139d718f4f8 120 SUPERFAMILY SSF53137 7 118 9.16E-56 T 12-10-2018 BEN31_14965 60fadf5662ba377efda51139d718f4f8 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 2.7E-48 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_14965 60fadf5662ba377efda51139d718f4f8 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 4.5E-52 T 12-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14965 60fadf5662ba377efda51139d718f4f8 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.273 T 12-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_14965 60fadf5662ba377efda51139d718f4f8 120 Gene3D G3DSA:3.30.420.100 5 120 1.5E-46 T 12-10-2018 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 SUPERFAMILY SSF51569 3 286 2.2E-97 T 12-10-2018 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 12-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 1.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 1.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 1.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 1.0E-34 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 287 7.6E-118 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 12-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 PIRSF PIRSF001365 1 288 3.3E-94 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 SMART SM01130 2 286 4.0E-130 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 288 63.074 T 12-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 Gene3D G3DSA:3.20.20.70 1 288 8.9E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_07890 640b4bea69664c011f136b713ac2d7f3 288 Pfam PF00701 Dihydrodipicolinate synthetase family 3 287 4.1E-116 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 SUPERFAMILY SSF51735 4 252 1.01E-86 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.6E-48 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 Gene3D G3DSA:3.40.50.720 1 253 3.4E-89 T 12-10-2018 BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17255 6e98eec40b405ade2c38be255d10733e 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 3.9E-72 T 12-10-2018 BEN31_06590 989e6b4ad76d176231b2ff7dcf8af815 292 Pfam PF07728 AAA domain (dynein-related subfamily) 55 192 5.2E-28 T 12-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 BEN31_06590 989e6b4ad76d176231b2ff7dcf8af815 292 SUPERFAMILY SSF52540 44 273 2.4E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06590 989e6b4ad76d176231b2ff7dcf8af815 292 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 128 146 3.7E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_06590 989e6b4ad76d176231b2ff7dcf8af815 292 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 56 74 3.7E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_06590 989e6b4ad76d176231b2ff7dcf8af815 292 Gene3D G3DSA:3.40.50.300 39 202 2.0E-33 T 12-10-2018 BEN31_06590 989e6b4ad76d176231b2ff7dcf8af815 292 SMART SM00382 52 201 1.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_03535 c0b500308be097c4163220a2a78283bd 286 SUPERFAMILY SSF53850 89 284 1.03E-30 T 12-10-2018 BEN31_03535 c0b500308be097c4163220a2a78283bd 286 Gene3D G3DSA:1.10.10.10 1 81 4.5E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03535 c0b500308be097c4163220a2a78283bd 286 Gene3D G3DSA:3.40.190.290 82 284 7.5E-72 T 12-10-2018 BEN31_03535 c0b500308be097c4163220a2a78283bd 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.5E-16 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_03535 c0b500308be097c4163220a2a78283bd 286 SUPERFAMILY SSF46785 1 111 6.23E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03535 c0b500308be097c4163220a2a78283bd 286 Pfam PF03466 LysR substrate binding domain 89 284 7.5E-33 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_03535 c0b500308be097c4163220a2a78283bd 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_03535 c0b500308be097c4163220a2a78283bd 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_03535 c0b500308be097c4163220a2a78283bd 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_06385 7365cc9b43ad9b310ccd87f181fcc686 253 Gene3D G3DSA:3.40.50.1110 20 248 6.8E-36 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BEN31_06385 7365cc9b43ad9b310ccd87f181fcc686 253 SUPERFAMILY SSF52266 37 247 4.09E-36 T 12-10-2018 BEN31_06385 7365cc9b43ad9b310ccd87f181fcc686 253 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 235 5.5E-28 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN31_06150 35f8770f9071bcb743b6093c47a4aeb4 139 SUPERFAMILY SSF49764 46 136 9.16E-10 T 12-10-2018 IPR008978 HSP20-like chaperone BEN31_06150 35f8770f9071bcb743b6093c47a4aeb4 139 Gene3D G3DSA:2.60.40.790 29 139 7.2E-13 T 12-10-2018 IPR008978 HSP20-like chaperone BEN31_06150 35f8770f9071bcb743b6093c47a4aeb4 139 Pfam PF00011 Hsp20/alpha crystallin family 63 138 5.5E-5 T 12-10-2018 IPR002068 Alpha crystallin/Hsp20 domain BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 SUPERFAMILY SSF52540 4 569 9.63E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Gene3D G3DSA:3.40.50.300 612 934 1.7E-146 T 12-10-2018 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Gene3D G3DSA:1.20.1580.10 92 492 1.6E-254 T 12-10-2018 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Gene3D G3DSA:3.30.190.20 132 241 1.6E-254 T 12-10-2018 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 923 0.0 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Pfam PF00005 ABC transporter 622 858 8.1E-10 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 SUPERFAMILY SSF52540 613 912 1.39E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Gene3D G3DSA:1.10.8.280 286 403 1.6E-254 T 12-10-2018 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Gene3D G3DSA:3.40.50.300 8 594 1.6E-254 T 12-10-2018 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.655 T 12-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 Gene3D G3DSA:1.20.1580.10 691 828 1.7E-146 T 12-10-2018 BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 SMART SM00382 25 564 9.1 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_18475 d1564c04546dd75aaa4a1460c00e2459 958 SMART SM00382 631 944 0.05 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_03480 67867a39b138ce4be8b4cb1106b4c122 492 SUPERFAMILY SSF51445 14 375 9.31E-99 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_03480 67867a39b138ce4be8b4cb1106b4c122 492 SMART SM00813 293 483 3.5E-75 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BEN31_03480 67867a39b138ce4be8b4cb1106b4c122 492 SUPERFAMILY SSF51011 361 489 1.65E-28 T 12-10-2018 BEN31_03480 67867a39b138ce4be8b4cb1106b4c122 492 Gene3D G3DSA:2.60.40.1180 11 487 8.2E-197 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN31_03480 67867a39b138ce4be8b4cb1106b4c122 492 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 293 483 1.5E-42 T 12-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 BEN31_03480 67867a39b138ce4be8b4cb1106b4c122 492 Gene3D G3DSA:3.20.20.80 15 375 8.2E-197 T 12-10-2018 BEN31_16775 d8e9c0655e5c068a9a00c17f60f5ff8e 295 SUPERFAMILY SSF53807 41 294 5.49E-52 T 12-10-2018 BEN31_16775 d8e9c0655e5c068a9a00c17f60f5ff8e 295 Pfam PF01497 Periplasmic binding protein 42 271 3.4E-39 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_16775 d8e9c0655e5c068a9a00c17f60f5ff8e 295 Gene3D G3DSA:3.40.50.1980 124 295 2.9E-57 T 12-10-2018 BEN31_16775 d8e9c0655e5c068a9a00c17f60f5ff8e 295 TIGRFAM TIGR03659 IsdE: heme ABC transporter, heme-binding protein isdE 7 293 3.8E-134 T 12-10-2018 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE GO:0015886|GO:0016020|GO:0020037 BEN31_16775 d8e9c0655e5c068a9a00c17f60f5ff8e 295 Gene3D G3DSA:3.40.50.1980 36 123 3.4E-33 T 12-10-2018 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 SUPERFAMILY SSF53223 16 193 1.57E-65 T 12-10-2018 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 Gene3D G3DSA:1.10.8.1210 18 352 1.2E-144 T 12-10-2018 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 SUPERFAMILY SSF51735 191 423 7.2E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 Gene3D G3DSA:1.10.8.1210 378 424 5.2E-17 T 12-10-2018 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 Gene3D G3DSA:3.40.50.720 179 351 1.2E-144 T 12-10-2018 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 Gene3D G3DSA:3.40.50.10860 43 178 1.2E-144 T 12-10-2018 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 191 422 9.3E-78 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 SMART SM00839 193 422 5.2E-95 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 224 244 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 182 204 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 102 116 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 350 361 1.6E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 PIRSF PIRSF000185 9 424 4.5E-172 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 110 123 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05790 a378318bfe27af945802c6165d5f8f17 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 47 173 3.2E-54 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_07540 d47ac6bee3b4b81cef1e00ce6be45f26 282 SMART SM00559 52 181 4.1E-44 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BEN31_07540 d47ac6bee3b4b81cef1e00ce6be45f26 282 SUPERFAMILY SSF100939 2 260 2.35E-51 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BEN31_07540 d47ac6bee3b4b81cef1e00ce6be45f26 282 Gene3D G3DSA:2.40.290.10 2 177 8.5E-23 T 12-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily BEN31_07540 d47ac6bee3b4b81cef1e00ce6be45f26 282 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 186 3.0E-43 T 12-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 BEN31_07540 d47ac6bee3b4b81cef1e00ce6be45f26 282 PIRSF PIRSF006493 1 282 6.6E-104 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BEN31_07540 d47ac6bee3b4b81cef1e00ce6be45f26 282 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 257 32.744 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BEN31_07540 d47ac6bee3b4b81cef1e00ce6be45f26 282 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 259 5.7E-93 T 12-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type BEN31_15955 807dd02b9e11cf7d6aed6636e5d39ee2 321 SUPERFAMILY SSF53807 47 311 1.14E-56 T 12-10-2018 BEN31_15955 807dd02b9e11cf7d6aed6636e5d39ee2 321 Gene3D G3DSA:3.40.50.1980 40 164 7.9E-29 T 12-10-2018 BEN31_15955 807dd02b9e11cf7d6aed6636e5d39ee2 321 Pfam PF01497 Periplasmic binding protein 61 289 2.7E-28 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_15955 807dd02b9e11cf7d6aed6636e5d39ee2 321 Gene3D G3DSA:3.40.50.1980 165 321 1.1E-42 T 12-10-2018 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 SMART SM01382 124 253 4.1E-94 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 SUPERFAMILY SSF50249 2 125 6.51E-52 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 12-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.5E-34 T 12-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 Gene3D G3DSA:4.10.950.10 197 276 3.0E-35 T 12-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 Gene3D G3DSA:2.30.30.30 118 196 5.7E-36 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 2.4E-141 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 Gene3D G3DSA:2.40.50.140 1 114 1.2E-49 T 12-10-2018 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 PIRSF PIRSF002158 3 276 1.6E-100 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 5.9E-58 T 12-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.981 T 12-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 SMART SM01383 42 118 1.3E-46 T 12-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15030 49c7c7a2d0acf2e0e2e9b7dd797d699b 277 SUPERFAMILY SSF50104 126 273 2.59E-61 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN31_00575 2d68d2ba1fb0152d980ee0fb82273e00 345 Gene3D G3DSA:1.10.10.10 19 89 2.0E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_00575 2d68d2ba1fb0152d980ee0fb82273e00 345 SUPERFAMILY SSF46785 19 82 6.59E-12 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_00575 2d68d2ba1fb0152d980ee0fb82273e00 345 Gene3D G3DSA:3.40.50.1360 90 340 5.8E-88 T 12-10-2018 BEN31_00575 2d68d2ba1fb0152d980ee0fb82273e00 345 Pfam PF04198 Putative sugar-binding domain 92 337 7.4E-73 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 BEN31_00575 2d68d2ba1fb0152d980ee0fb82273e00 345 SUPERFAMILY SSF100950 90 337 4.67E-68 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_06005 01b536267b4a63d86ecd00b37ed00e87 224 SUPERFAMILY SSF81342 6 224 3.3E-61 T 12-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 BEN31_06005 01b536267b4a63d86ecd00b37ed00e87 224 Gene3D G3DSA:1.20.810.10 1 224 1.2E-89 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 BEN31_06005 01b536267b4a63d86ecd00b37ed00e87 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 4.9E-49 T 12-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BEN31_06005 01b536267b4a63d86ecd00b37ed00e87 224 PIRSF PIRSF000032 2 224 2.4E-104 T 12-10-2018 BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 Gene3D G3DSA:3.40.190.10 160 260 7.7E-40 T 12-10-2018 BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 Gene3D G3DSA:1.10.10.10 1 83 7.8E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 6.5E-17 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 Gene3D G3DSA:3.40.190.10 92 281 7.7E-40 T 12-10-2018 BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 SUPERFAMILY SSF46785 1 111 5.44E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 SUPERFAMILY SSF53850 92 289 3.26E-32 T 12-10-2018 BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 Pfam PF03466 LysR substrate binding domain 91 282 9.5E-32 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_13230 a892a1b4a994488e5a3906fa9a740a15 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_18090 6a10a788dc1402b027fe6951eb94af61 668 Gene3D G3DSA:3.40.50.2000 168 345 1.8E-15 T 12-10-2018 BEN31_18090 6a10a788dc1402b027fe6951eb94af61 668 SUPERFAMILY SSF53756 263 525 3.98E-44 T 12-10-2018 BEN31_18090 6a10a788dc1402b027fe6951eb94af61 668 Pfam PF09318 Glycosyl transferase 1 domain A 33 217 2.7E-73 T 12-10-2018 IPR015397 Glycosyl transferase 1, domain A BEN31_18090 6a10a788dc1402b027fe6951eb94af61 668 Pfam PF00534 Glycosyl transferases group 1 348 502 7.0E-29 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BEN31_18090 6a10a788dc1402b027fe6951eb94af61 668 Gene3D G3DSA:3.40.50.2000 346 508 8.2E-36 T 12-10-2018 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 Gene3D G3DSA:1.20.1250.20 250 436 3.2E-24 T 12-10-2018 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 SUPERFAMILY SSF103473 8 431 4.97E-67 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 4.3E-5 T 12-10-2018 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 4.3E-5 T 12-10-2018 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 4.3E-5 T 12-10-2018 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 4.3E-5 T 12-10-2018 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 Pfam PF07690 Major Facilitator Superfamily 263 427 1.2E-17 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 Pfam PF07690 Major Facilitator Superfamily 13 190 1.6E-36 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_18445 ab91f58938a3bc0afaf80d5868532c54 444 Gene3D G3DSA:1.20.1720.10 9 236 1.2E-48 T 12-10-2018 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 SUPERFAMILY SSF53720 10 421 1.18E-111 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 Pfam PF00171 Aldehyde dehydrogenase family 10 289 2.9E-16 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 Gene3D G3DSA:3.40.605.10 23 416 9.3E-164 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 10 421 41.108 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 PIRSF PIRSF000151 3 422 8.9E-177 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 Gene3D G3DSA:3.40.309.10 231 379 9.3E-164 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 328 349 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_06795 ffd1c07935308debc8911e98868d5858 422 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 18 411 6.7E-163 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 Gene3D G3DSA:1.10.287.130 185 307 2.4E-17 T 12-10-2018 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 SUPERFAMILY SSF55874 303 466 3.93E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 SMART SM00388 245 313 2.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 Gene3D G3DSA:3.30.565.10 308 467 8.6E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 309 9.9E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 423 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 2.7E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 SUPERFAMILY SSF47384 229 313 5.69E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 360 466 7.6E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_07180 9332e3f75d4bfb784d0f8a07ec9df3fa 467 SMART SM00387 359 467 4.5E-27 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_18175 d8a13ba4932d7f9c16049dd95500d7b7 496 SMART SM00646 380 492 6.3E-45 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_18175 d8a13ba4932d7f9c16049dd95500d7b7 496 Gene3D G3DSA:3.40.630.40 319 496 2.3E-59 T 12-10-2018 BEN31_18175 d8a13ba4932d7f9c16049dd95500d7b7 496 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 322 491 4.4E-51 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_18175 d8a13ba4932d7f9c16049dd95500d7b7 496 SUPERFAMILY SSF53187 320 496 1.16E-52 T 12-10-2018 BEN31_18175 d8a13ba4932d7f9c16049dd95500d7b7 496 Pfam PF04122 Putative cell wall binding repeat 2 129 213 2.1E-18 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BEN31_18175 d8a13ba4932d7f9c16049dd95500d7b7 496 Pfam PF04122 Putative cell wall binding repeat 2 223 309 5.0E-13 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BEN31_18175 d8a13ba4932d7f9c16049dd95500d7b7 496 Pfam PF04122 Putative cell wall binding repeat 2 30 116 3.7E-16 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BEN31_10320 bb811ddcac557d6773503268a7cff7a5 314 Gene3D G3DSA:1.10.3720.10 84 302 1.8E-21 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_10320 bb811ddcac557d6773503268a7cff7a5 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 6.7E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_10320 bb811ddcac557d6773503268a7cff7a5 314 SUPERFAMILY SSF161098 88 294 3.27E-20 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 Gene3D G3DSA:3.40.710.10 283 478 3.0E-111 T 12-10-2018 BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 SUPERFAMILY SSF56601 171 565 1.71E-99 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 SMART SM00740 580 638 1.1E-13 T 12-10-2018 IPR005543 PASTA domain BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 Pfam PF03793 PASTA domain 584 637 1.1E-10 T 12-10-2018 IPR005543 PASTA domain BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 SUPERFAMILY SSF54184 584 638 7.72E-11 T 12-10-2018 BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 Gene3D G3DSA:3.90.1310.30 49 220 5.1E-45 T 12-10-2018 BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 11 637 1.8E-265 T 12-10-2018 IPR011927 Stage V sporulation protein D BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 Gene3D G3DSA:3.30.10.20 580 636 1.4E-7 T 12-10-2018 BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 Gene3D G3DSA:3.30.450.330 222 560 3.0E-111 T 12-10-2018 BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 556 2.7E-85 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 SUPERFAMILY SSF56519 52 220 2.22E-43 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN31_08740 5f53d2ccec005e86bb8f71962d3be4a1 639 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 200 1.7E-22 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 618 38.653 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 Pfam PF06480 FtsH Extracellular 9 104 1.0E-9 T 12-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 197 329 5.7E-44 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 Gene3D G3DSA:1.10.8.60 331 405 2.4E-30 T 12-10-2018 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 Gene3D G3DSA:3.40.50.300 147 330 6.6E-70 T 12-10-2018 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 SUPERFAMILY SSF140990 411 605 5.1E-73 T 12-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 SMART SM00382 193 332 1.3E-23 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 Gene3D G3DSA:1.20.58.760 406 609 1.5E-75 T 12-10-2018 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 ProSitePatterns PS00674 AAA-protein family signature. 300 318 - T 12-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 Pfam PF01434 Peptidase family M41 391 600 2.2E-88 T 12-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 SUPERFAMILY SSF52540 151 401 5.83E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15350 ec976c1e84d0c02486f3d1e90cbf64f0 633 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 601 1.3E-246 T 12-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 PIRSF PIRSF006809 1 419 2.9E-148 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 Pfam PF13167 GTP-binding GTPase N-terminal 27 114 6.0E-33 T 12-10-2018 IPR025121 GTPase HflX, N-terminal BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 SUPERFAMILY SSF52540 199 362 3.51E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 Pfam PF01926 50S ribosome-binding GTPase 201 320 5.7E-21 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 Pfam PF16360 GTP-binding GTPase Middle Region 116 194 1.5E-30 T 12-10-2018 IPR032305 GTP-binding protein, middle domain BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 Hamap MF_00900 GTPase HflX [hflX]. 29 388 47.053 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 269 287 6.3E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 6.3E-9 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 9 356 1.6E-145 T 12-10-2018 IPR016496 GTPase HflX GO:0005525 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 Gene3D G3DSA:3.40.50.11060 20 140 8.3E-41 T 12-10-2018 BEN31_07620 111e10468c9a79ab59f10729accdb60f 420 Gene3D G3DSA:3.40.50.300 201 367 2.3E-35 T 12-10-2018 BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 ProSitePatterns PS00359 Ribosomal protein L11 signature. 129 144 - T 12-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 SUPERFAMILY SSF46906 70 143 1.57E-27 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 Pfam PF00298 Ribosomal protein L11, RNA binding domain 74 142 2.9E-26 T 12-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 SMART SM00649 12 143 1.2E-87 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 39 76 8.0E-16 T 12-10-2018 BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 Gene3D G3DSA:3.30.1550.10 5 74 3.4E-34 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 8 144 31.847 T 12-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 SUPERFAMILY SSF54747 4 87 1.83E-30 T 12-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 6 144 3.2E-64 T 12-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 Gene3D G3DSA:1.10.10.250 75 143 6.1E-30 T 12-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily BEN31_15115 9ed3a23a8aeea2f448ff0ccbee343cb1 144 Pfam PF03946 Ribosomal protein L11, N-terminal domain 12 69 1.7E-30 T 12-10-2018 IPR020784 Ribosomal protein L11, N-terminal BEN31_08100 30bb49ce315396ce1865331772111b53 371 Gene3D G3DSA:3.40.50.300 175 359 4.7E-78 T 12-10-2018 BEN31_08100 30bb49ce315396ce1865331772111b53 371 Pfam PF00448 SRP54-type protein, GTPase domain 181 370 2.6E-44 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08100 30bb49ce315396ce1865331772111b53 371 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 267 9.1E-60 T 12-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 BEN31_08100 30bb49ce315396ce1865331772111b53 371 SUPERFAMILY SSF52540 180 358 1.39E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08100 30bb49ce315396ce1865331772111b53 371 Gene3D G3DSA:1.20.120.1380 129 362 4.7E-78 T 12-10-2018 BEN31_08100 30bb49ce315396ce1865331772111b53 371 SMART SM00962 180 371 2.7E-55 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_01395 f61a5daf8fdbce9a23bf919f823a04f4 465 SUPERFAMILY SSF101960 32 462 3.01E-139 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BEN31_01395 f61a5daf8fdbce9a23bf919f823a04f4 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 9.4E-231 T 12-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 BEN31_01395 f61a5daf8fdbce9a23bf919f823a04f4 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 9.6E-75 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BEN31_01690 3ab5fb19e034463ce89c376676d23f69 161 ProDom PD090911 YUEC MEMBRANE TRANSMEMBRANE 14 113 6.0E-6 T 12-10-2018 IPR020212 ESX secretion system protein YueC BEN31_01690 3ab5fb19e034463ce89c376676d23f69 161 Pfam PF17355 Family of unknown function (DUF5383) 35 156 2.1E-36 T 12-10-2018 IPR020212 ESX secretion system protein YueC BEN31_01690 3ab5fb19e034463ce89c376676d23f69 161 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 12 155 2.5E-39 T 12-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC BEN31_16320 120d4570a1e4a5b428dfe34677312717 253 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16320 120d4570a1e4a5b428dfe34677312717 253 SUPERFAMILY SSF52540 18 227 7.55E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16320 120d4570a1e4a5b428dfe34677312717 253 Gene3D G3DSA:3.40.50.300 1 251 7.8E-60 T 12-10-2018 BEN31_16320 120d4570a1e4a5b428dfe34677312717 253 SMART SM00382 34 222 2.9E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16320 120d4570a1e4a5b428dfe34677312717 253 Pfam PF00005 ABC transporter 25 174 1.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09710 2195d237443cf9135e0c965d500780b2 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.8E-26 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BEN31_09710 2195d237443cf9135e0c965d500780b2 104 Gene3D G3DSA:1.10.3730.20 1 104 3.0E-24 T 12-10-2018 BEN31_09710 2195d237443cf9135e0c965d500780b2 104 SUPERFAMILY SSF103481 6 101 9.15E-16 T 12-10-2018 BEN31_08465 47cbe16fd8ba6053ebdffde89b5764e6 89 Pfam PF04025 Domain of unknown function (DUF370) 5 77 7.5E-37 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BEN31_08465 47cbe16fd8ba6053ebdffde89b5764e6 89 Hamap MF_01503 UPF0296 protein . 3 82 29.086 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BEN31_08465 47cbe16fd8ba6053ebdffde89b5764e6 89 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 1.0E-35 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 Gene3D G3DSA:3.40.309.10 224 372 8.3E-159 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 Pfam PF00171 Aldehyde dehydrogenase family 6 281 2.5E-11 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 13 404 8.6E-168 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 40.197 T 12-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 SUPERFAMILY SSF53720 2 414 1.18E-106 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 Gene3D G3DSA:3.40.605.10 16 409 8.3E-159 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 PIRSF PIRSF000151 1 415 4.9E-173 T 12-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BEN31_09690 f1355c56b8008b3b00c53c3507b47927 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 343 - T 12-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 PIRSF PIRSF000144 59 711 1.5E-42 T 12-10-2018 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 Pfam PF01568 Molydopterin dinucleotide binding domain 597 704 2.8E-31 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 20 73 6.0E-11 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 SUPERFAMILY SSF50692 589 709 3.16E-37 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN31_06845 6a822feafad1aba363fd1965adae3144 712 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 449 466 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 SUPERFAMILY SSF53706 20 599 8.38E-168 T 12-10-2018 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 Gene3D G3DSA:3.40.50.740 83 552 2.5E-158 T 12-10-2018 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 24 41 - T 12-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 Gene3D G3DSA:2.40.40.20 594 709 1.1E-37 T 12-10-2018 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 Gene3D G3DSA:2.20.25.90 20 74 2.5E-7 T 12-10-2018 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 Pfam PF00384 Molybdopterin oxidoreductase 78 503 2.0E-89 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 Gene3D G3DSA:3.40.228.10 156 355 2.5E-158 T 12-10-2018 BEN31_06845 6a822feafad1aba363fd1965adae3144 712 SMART SM00926 19 75 3.4E-7 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_11035 d72cb1c5acab7dc67d5af07d02e88ea1 119 SUPERFAMILY SSF158622 3 114 8.63E-39 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BEN31_11035 d72cb1c5acab7dc67d5af07d02e88ea1 119 Hamap MF_01526 UPF0342 protein . 2 113 19.253 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BEN31_11035 d72cb1c5acab7dc67d5af07d02e88ea1 119 Gene3D G3DSA:1.20.1500.10 2 113 9.7E-39 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BEN31_11035 d72cb1c5acab7dc67d5af07d02e88ea1 119 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 5 108 1.4E-23 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 12-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 SUPERFAMILY SSF54211 6 155 3.26E-31 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 TIGRFAM TIGR00191 thrB: homoserine kinase 8 299 1.9E-96 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 PIRSF PIRSF000676 4 301 7.3E-90 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 Gene3D G3DSA:3.30.70.890 166 289 6.6E-35 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 SUPERFAMILY SSF55060 164 284 4.75E-33 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 Gene3D G3DSA:3.30.230.10 6 165 7.3E-44 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 Pfam PF08544 GHMP kinases C terminal 205 282 3.3E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 PRINTS PR00958 Homoserine kinase signature 131 144 7.3E-40 T 12-10-2018 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 PRINTS PR00958 Homoserine kinase signature 249 264 7.3E-40 T 12-10-2018 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 PRINTS PR00958 Homoserine kinase signature 97 112 7.3E-40 T 12-10-2018 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 PRINTS PR00958 Homoserine kinase signature 169 186 7.3E-40 T 12-10-2018 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 PRINTS PR00958 Homoserine kinase signature 15 30 7.3E-40 T 12-10-2018 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 Pfam PF00288 GHMP kinases N terminal domain 84 144 4.6E-12 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BEN31_01550 ae8bb9021a5651035ade1b98c84348ee 310 Hamap MF_00384 Homoserine kinase [thrB]. 10 299 29.22 T 12-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 SUPERFAMILY SSF50249 6 110 4.38E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 SUPERFAMILY SSF55681 120 588 1.7E-109 T 12-10-2018 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 Gene3D G3DSA:3.30.1360.30 280 424 1.5E-197 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 Gene3D G3DSA:3.30.930.10 124 586 1.5E-197 T 12-10-2018 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 Gene3D G3DSA:2.40.50.140 2 110 7.0E-35 T 12-10-2018 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 Pfam PF01336 OB-fold nucleic acid binding domain 22 107 5.1E-17 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 198 210 2.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 215 228 2.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 479 495 2.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 523 537 2.2E-26 T 12-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 5 589 34.855 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 Pfam PF02938 GAD domain 316 410 3.2E-32 T 12-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 125 562 1.6E-111 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 SUPERFAMILY SSF55261 297 424 8.99E-43 T 12-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 BEN31_04000 685e62c21ce6144a5290c06873bb8fa9 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 587 6.4E-268 T 12-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 Gene3D G3DSA:1.10.287.130 187 302 2.6E-30 T 12-10-2018 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 SMART SM00304 189 242 5.6E-8 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 SUPERFAMILY SSF47384 226 306 1.8E-18 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 SMART SM00387 351 463 6.3E-36 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 SUPERFAMILY SSF158472 191 239 4.71E-7 T 12-10-2018 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 460 3.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 3.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 3.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 3.3E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 SMART SM00388 243 306 3.8E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 SUPERFAMILY SSF55874 296 463 3.54E-47 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 244 305 1.1E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 Gene3D G3DSA:3.30.565.10 311 465 8.5E-43 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_18430 076bc4cc95fb21e032b48b6f86b1ff20 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 461 3.6E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01455 aa30a3cbb466770985c72a0fcd81ce96 411 Pfam PF00266 Aminotransferase class-V 39 355 3.5E-32 T 12-10-2018 IPR000192 Aminotransferase class V domain BEN31_01455 aa30a3cbb466770985c72a0fcd81ce96 411 SUPERFAMILY SSF53383 12 389 3.34E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_01455 aa30a3cbb466770985c72a0fcd81ce96 411 Gene3D G3DSA:3.90.1150.10 10 386 9.8E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_01455 aa30a3cbb466770985c72a0fcd81ce96 411 Gene3D G3DSA:3.40.640.10 23 285 9.8E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_01455 aa30a3cbb466770985c72a0fcd81ce96 411 PIRSF PIRSF000524 5 410 3.7E-133 T 12-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 BEN31_01455 aa30a3cbb466770985c72a0fcd81ce96 411 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 Pfam PF00042 Globin 7 102 1.7E-6 T 12-10-2018 IPR000971 Globin GO:0020037 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 Gene3D G3DSA:2.40.30.10 152 252 5.1E-32 T 12-10-2018 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 Pfam PF00970 Oxidoreductase FAD-binding domain 158 252 1.7E-7 T 12-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 SUPERFAMILY SSF52343 255 389 1.18E-23 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 Gene3D G3DSA:3.40.50.80 253 395 8.0E-26 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 SUPERFAMILY SSF46458 1 138 2.83E-31 T 12-10-2018 IPR009050 Globin-like superfamily BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 3.5E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 3.5E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 356 364 3.5E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 3.5E-7 T 12-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 Pfam PF00175 Oxidoreductase NAD-binding domain 264 367 1.0E-7 T 12-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 Gene3D G3DSA:1.10.490.10 1 145 1.9E-44 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BEN31_11185 a78cbf5d48942cad64dc822402b05247 399 SUPERFAMILY SSF63380 151 254 7.66E-25 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Gene3D G3DSA:2.30.30.40 116 172 2.7E-16 T 12-10-2018 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 354 522 1.4E-46 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Gene3D G3DSA:3.40.630.40 340 526 7.0E-54 T 12-10-2018 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 PIRSF PIRSF037846 3 262 1.0E-66 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 PIRSF PIRSF037846 185 526 5.6E-133 T 12-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 SUPERFAMILY SSF53187 351 525 1.79E-51 T 12-10-2018 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 SMART SM00287 267 329 7.5E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 SMART SM00287 189 251 2.7E-9 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 SMART SM00287 113 175 2.2E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 SMART SM00287 32 94 3.4E-18 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Gene3D G3DSA:2.30.30.40 189 247 7.5E-15 T 12-10-2018 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 SMART SM00646 413 522 6.0E-33 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Pfam PF08239 Bacterial SH3 domain 197 247 1.4E-10 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Pfam PF08239 Bacterial SH3 domain 121 172 2.7E-12 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Pfam PF08239 Bacterial SH3 domain 276 325 6.2E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Pfam PF08239 Bacterial SH3 domain 42 90 1.5E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Gene3D G3DSA:2.30.30.40 25 95 3.5E-17 T 12-10-2018 BEN31_03990 c64e134927463e2a7e04b6869cda2171 526 Gene3D G3DSA:2.30.30.40 259 330 1.9E-12 T 12-10-2018 BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 Gene3D G3DSA:3.40.1350.30 134 289 8.8E-130 T 12-10-2018 BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 450 1.4E-198 T 12-10-2018 BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 Pfam PF01938 TRAM domain 8 62 1.1E-11 T 12-10-2018 IPR002792 TRAM domain BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 440 450 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 279 456 1.7E-23 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 419 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 SUPERFAMILY SSF50249 3 64 1.14E-16 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 Gene3D G3DSA:3.40.50.150 85 451 8.8E-130 T 12-10-2018 BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 Gene3D G3DSA:2.40.50.140 1 83 1.4E-22 T 12-10-2018 BEN31_12395 df72ae9ec3f139e7c7706da6bb5a9933 461 SUPERFAMILY SSF53335 72 456 3.12E-95 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_14265 1641e1acc3d7d9c1df20a0fe5ab99210 346 Pfam PF11611 Domain of unknown function (DUF4352) 32 143 7.7E-25 T 12-10-2018 IPR029051 Domain of unknown function DUF4352 BEN31_14265 1641e1acc3d7d9c1df20a0fe5ab99210 346 Gene3D G3DSA:2.60.40.1240 32 165 3.3E-19 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily BEN31_14265 1641e1acc3d7d9c1df20a0fe5ab99210 346 Pfam PF17118 Domain of unknown function (DUF5105) 156 343 4.8E-69 T 12-10-2018 IPR031343 Domain of unknown function DUF5105 BEN31_16190 350a1f24d2c53af0a3981ec35c7382d8 168 Gene3D G3DSA:3.20.90.20 1 158 2.4E-7 T 12-10-2018 IPR038595 LURP-one-related superfamily BEN31_16190 350a1f24d2c53af0a3981ec35c7382d8 168 Pfam PF04525 LURP-one-related 6 147 4.0E-13 T 12-10-2018 IPR007612 LURP-one-related BEN31_16190 350a1f24d2c53af0a3981ec35c7382d8 168 SUPERFAMILY SSF54518 2 152 1.52E-31 T 12-10-2018 IPR025659 Tubby-like, C-terminal BEN31_15365 7f81dac06501f667d360f867819c75bd 335 SUPERFAMILY SSF56112 10 229 5.88E-24 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_15365 7f81dac06501f667d360f867819c75bd 335 Pfam PF00069 Protein kinase domain 22 232 1.2E-15 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN31_15365 7f81dac06501f667d360f867819c75bd 335 SMART SM00220 22 278 1.0E-6 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN31_15365 7f81dac06501f667d360f867819c75bd 335 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 28 49 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BEN31_15365 7f81dac06501f667d360f867819c75bd 335 Gene3D G3DSA:3.30.200.20 15 104 5.1E-24 T 12-10-2018 BEN31_15365 7f81dac06501f667d360f867819c75bd 335 Gene3D G3DSA:1.10.510.10 105 258 5.1E-24 T 12-10-2018 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Pfam PF08264 Anticodon-binding domain of tRNA 608 756 8.3E-45 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 SUPERFAMILY SSF46589 814 878 2.09E-16 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 SUPERFAMILY SSF47323 577 829 4.49E-78 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 565 2.7E-227 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Gene3D G3DSA:3.40.50.620 28 526 0.0 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 SUPERFAMILY SSF52374 7 575 4.98E-146 T 12-10-2018 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Gene3D G3DSA:3.90.740.10 181 347 0.0 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 879 16.285 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Gene3D G3DSA:1.10.730.10 8 741 0.0 T 12-10-2018 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 8.7E-40 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 8.7E-40 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 PRINTS PR00986 Valyl-tRNA synthetase signature 445 466 8.7E-40 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 8.7E-40 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 PRINTS PR00986 Valyl-tRNA synthetase signature 477 495 8.7E-40 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Gene3D G3DSA:1.10.287.380 807 879 3.2E-23 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 861 0.0 T 12-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 SUPERFAMILY SSF50677 197 347 2.62E-64 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN31_03750 dbdbf4acecf67dbf20f791e2be234aeb 880 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 879 2.1E-22 T 12-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 19 30 - T 12-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 SMART SM00729 13 222 9.8E-15 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 Gene3D G3DSA:3.20.20.70 1 335 1.8E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 335 7.7E-118 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 Pfam PF13353 4Fe-4S single cluster domain 21 108 7.0E-7 T 12-10-2018 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 SUPERFAMILY SSF102114 5 292 8.63E-80 T 12-10-2018 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 Pfam PF04055 Radical SAM superfamily 17 181 1.2E-32 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 4 335 41.032 T 12-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_17695 673ed0ef9e42d3bf8a7ee06e50c0a36a 335 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 316 3.6E-37 T 12-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_02265 3d3cc721a843c1964b15165363267901 515 Pfam PF15975 Flotillin 369 464 1.3E-15 T 12-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 BEN31_02265 3d3cc721a843c1964b15165363267901 515 Gene3D G3DSA:3.30.479.30 78 194 7.6E-39 T 12-10-2018 BEN31_02265 3d3cc721a843c1964b15165363267901 515 SMART SM00244 120 302 1.1E-11 T 12-10-2018 IPR001107 Band 7 domain BEN31_02265 3d3cc721a843c1964b15165363267901 515 SUPERFAMILY SSF117892 69 211 3.27E-35 T 12-10-2018 IPR036013 Band 7/SPFH domain superfamily BEN31_02265 3d3cc721a843c1964b15165363267901 515 Pfam PF01145 SPFH domain / Band 7 family 31 220 8.6E-26 T 12-10-2018 IPR001107 Band 7 domain BEN31_12665 06fc3fa9c80401707ab502d44376872b 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 33.847 T 12-10-2018 IPR033747 Class I PurE BEN31_12665 06fc3fa9c80401707ab502d44376872b 162 PIRSF PIRSF001338 1 162 1.0E-71 T 12-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 BEN31_12665 06fc3fa9c80401707ab502d44376872b 162 SUPERFAMILY SSF52255 4 160 4.32E-70 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BEN31_12665 06fc3fa9c80401707ab502d44376872b 162 SMART SM01001 3 154 5.0E-110 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BEN31_12665 06fc3fa9c80401707ab502d44376872b 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 161 5.8E-70 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BEN31_12665 06fc3fa9c80401707ab502d44376872b 162 Gene3D G3DSA:3.40.50.7700 1 162 4.8E-75 T 12-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 BEN31_12665 06fc3fa9c80401707ab502d44376872b 162 Pfam PF00731 AIR carboxylase 5 152 3.5E-67 T 12-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Pfam PF08279 HTH domain 5 62 2.9E-10 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 503 639 2.9E-26 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 SUPERFAMILY SSF63520 178 281 3.01E-19 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Gene3D G3DSA:3.40.50.2300 408 496 2.2E-6 T 12-10-2018 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 SUPERFAMILY SSF63520 298 401 1.57E-22 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Gene3D G3DSA:3.40.930.10 500 641 1.9E-23 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 SUPERFAMILY SSF52794 408 484 3.61E-5 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Pfam PF05043 Mga helix-turn-helix domain 91 166 1.0E-16 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Gene3D G3DSA:1.10.10.10 2 152 4.2E-14 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 SUPERFAMILY SSF55804 501 640 4.97E-28 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Pfam PF00874 PRD domain 204 281 8.2E-17 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Pfam PF00874 PRD domain 309 397 9.3E-21 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Gene3D G3DSA:1.10.1790.10 299 399 2.8E-23 T 12-10-2018 BEN31_16865 f7e719986e88893553be350dcec3f7ee 647 Gene3D G3DSA:1.10.1790.10 188 283 2.6E-14 T 12-10-2018 BEN31_00905 bf19c7b50a2a6daa29c7f92686576935 1338 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 161 506 1.2E-91 T 12-10-2018 IPR010090 Phage tail tape measure protein BEN31_00905 bf19c7b50a2a6daa29c7f92686576935 1338 SUPERFAMILY SSF57997 29 146 7.85E-7 T 12-10-2018 BEN31_00905 bf19c7b50a2a6daa29c7f92686576935 1338 Pfam PF10145 Phage-related minor tail protein 201 399 6.4E-44 T 12-10-2018 IPR010090 Phage tail tape measure protein BEN31_05880 4aedcc8c33f7e135330eda44b673f777 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 1.5E-272 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 BEN31_05880 4aedcc8c33f7e135330eda44b673f777 492 Gene3D G3DSA:3.40.50.300 12 236 1.1E-10 T 12-10-2018 BEN31_05880 4aedcc8c33f7e135330eda44b673f777 492 SUPERFAMILY SSF52540 19 224 1.47E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05880 4aedcc8c33f7e135330eda44b673f777 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 9.6E-228 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 BEN31_05880 4aedcc8c33f7e135330eda44b673f777 492 PIRSF PIRSF007466 1 492 6.6E-270 T 12-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 BEN31_02730 45d8b2fe4418d15763bd70cc9a65d7ea 370 Pfam PF07470 Glycosyl Hydrolase Family 88 14 364 4.2E-116 T 12-10-2018 IPR010905 Glycosyl hydrolase, family 88 BEN31_02730 45d8b2fe4418d15763bd70cc9a65d7ea 370 SUPERFAMILY SSF48208 12 364 5.67E-78 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN31_02730 45d8b2fe4418d15763bd70cc9a65d7ea 370 Gene3D G3DSA:1.50.10.10 1 367 3.2E-144 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN31_02985 725615fbd71d16f064b8cf494031e3a6 221 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_02985 725615fbd71d16f064b8cf494031e3a6 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 6.4E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_02985 725615fbd71d16f064b8cf494031e3a6 221 Gene3D G3DSA:1.10.357.10 2 209 2.9E-37 T 12-10-2018 BEN31_02985 725615fbd71d16f064b8cf494031e3a6 221 SUPERFAMILY SSF46689 6 78 3.03E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_02985 725615fbd71d16f064b8cf494031e3a6 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_02985 725615fbd71d16f064b8cf494031e3a6 221 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14890 15e483030f9720e28c85b795a000a7c0 289 SMART SM00382 32 223 1.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14890 15e483030f9720e28c85b795a000a7c0 289 Pfam PF00005 ABC transporter 24 174 9.5E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_14890 15e483030f9720e28c85b795a000a7c0 289 Gene3D G3DSA:3.40.50.300 1 286 1.3E-77 T 12-10-2018 BEN31_14890 15e483030f9720e28c85b795a000a7c0 289 SUPERFAMILY SSF52540 1 240 2.27E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14890 15e483030f9720e28c85b795a000a7c0 289 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 280 1.4E-122 T 12-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 BEN31_14890 15e483030f9720e28c85b795a000a7c0 289 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_07950 817ff0c73f0b2f0d2a85d47d248e998b 309 Gene3D G3DSA:3.30.2350.10 1 242 7.2E-93 T 12-10-2018 BEN31_07950 817ff0c73f0b2f0d2a85d47d248e998b 309 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 237 8.4E-16 T 12-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 BEN31_07950 817ff0c73f0b2f0d2a85d47d248e998b 309 SUPERFAMILY SSF55120 1 237 2.24E-81 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_07950 817ff0c73f0b2f0d2a85d47d248e998b 309 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 217 2.8E-87 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_07950 817ff0c73f0b2f0d2a85d47d248e998b 309 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 178 7.1E-59 T 12-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 BEN31_07950 817ff0c73f0b2f0d2a85d47d248e998b 309 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 303 19.593 T 12-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_02625 c4d2234ab6319c6e08905822bf97827a 321 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 314 4.5E-140 T 12-10-2018 IPR005911 Protein YhcC-like GO:0051536 BEN31_02625 c4d2234ab6319c6e08905822bf97827a 321 SMART SM00729 32 259 8.2E-45 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_02625 c4d2234ab6319c6e08905822bf97827a 321 Pfam PF16199 Radical_SAM C-terminal domain 220 303 2.8E-26 T 12-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 BEN31_02625 c4d2234ab6319c6e08905822bf97827a 321 Pfam PF04055 Radical SAM superfamily 52 214 4.8E-15 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_02625 c4d2234ab6319c6e08905822bf97827a 321 SUPERFAMILY SSF102114 5 314 9.94E-57 T 12-10-2018 BEN31_02625 c4d2234ab6319c6e08905822bf97827a 321 Gene3D G3DSA:3.80.30.20 50 257 7.6E-15 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN31_14950 8d25348e13a9993c8d3e8249d36f04d2 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.1E-39 T 12-10-2018 IPR021131 Ribosomal protein L18e/L15P BEN31_14950 8d25348e13a9993c8d3e8249d36f04d2 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 12-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14950 8d25348e13a9993c8d3e8249d36f04d2 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.7E-56 T 12-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14950 8d25348e13a9993c8d3e8249d36f04d2 146 Gene3D G3DSA:3.100.10.10 66 146 6.9E-29 T 12-10-2018 BEN31_14950 8d25348e13a9993c8d3e8249d36f04d2 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.985 T 12-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 BEN31_14950 8d25348e13a9993c8d3e8249d36f04d2 146 SUPERFAMILY SSF52080 4 143 2.75E-50 T 12-10-2018 IPR036227 Ribosomal L18e/L15P superfamily BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 Pfam PF00457 Glycosyl hydrolases family 11 39 219 4.5E-66 T 12-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 206 217 - T 12-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 Gene3D G3DSA:2.60.120.180 27 227 1.7E-92 T 12-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 SUPERFAMILY SSF49899 29 224 5.07E-82 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 117 127 - T 12-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 PRINTS PR00911 Glycosyl hydrolase family 11 signature 143 149 7.9E-18 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 PRINTS PR00911 Glycosyl hydrolase family 11 signature 191 199 7.9E-18 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 PRINTS PR00911 Glycosyl hydrolase family 11 signature 107 116 7.9E-18 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 PRINTS PR00911 Glycosyl hydrolase family 11 signature 163 168 7.9E-18 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 PRINTS PR00911 Glycosyl hydrolase family 11 signature 117 127 7.9E-18 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_06770 93786f633c1d7ba434db42b7789f06a8 227 PRINTS PR00911 Glycosyl hydrolase family 11 signature 168 177 7.9E-18 T 12-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_04160 654983950c081f467c796c5f0b136729 67 Pfam PF10750 Protein of unknown function (DUF2536) 1 66 3.3E-34 T 12-10-2018 IPR019686 Protein of unknown function DUF2536 BEN31_10280 cf8b1e5ae1bb68318bfa91fa9483760f 221 Gene3D G3DSA:3.30.70.1950 123 221 1.8E-31 T 12-10-2018 IPR038471 MecA, C-terminal domain superfamily BEN31_10280 cf8b1e5ae1bb68318bfa91fa9483760f 221 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 216 1.0E-53 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BEN31_10280 cf8b1e5ae1bb68318bfa91fa9483760f 221 PIRSF PIRSF029008 1 221 9.0E-76 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BEN31_10280 cf8b1e5ae1bb68318bfa91fa9483760f 221 Hamap MF_01124 Adapter protein MecA [mecA]. 1 220 27.635 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 Gene3D G3DSA:1.20.1260.110 146 291 2.0E-45 T 12-10-2018 IPR038331 DisA, linker domain superfamily BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 Pfam PF10635 DisA bacterial checkpoint controller linker region 145 283 6.2E-50 T 12-10-2018 IPR018906 DNA integrity scanning, DisA, linker region BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 1 356 44.843 T 12-10-2018 IPR023763 DNA integrity scanning protein, DisA BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 28 140 3.4E-28 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 Gene3D G3DSA:3.40.1700.10 10 145 1.7E-56 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 SUPERFAMILY SSF47781 241 356 1.81E-13 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 Gene3D G3DSA:1.10.150.20 292 355 4.2E-26 T 12-10-2018 BEN31_15180 2bb26da8bec68e49dd787f469fe228fe 359 SUPERFAMILY SSF143597 21 145 6.28E-31 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BEN31_01475 31375e8e53a4604e613131c38d2300b3 283 Pfam PF01904 Protein of unknown function DUF72 16 265 7.9E-60 T 12-10-2018 IPR002763 Protein of unknown function DUF72 BEN31_01475 31375e8e53a4604e613131c38d2300b3 283 Gene3D G3DSA:3.20.20.410 1 282 2.1E-95 T 12-10-2018 IPR036520 UPF0759 superfamily BEN31_01475 31375e8e53a4604e613131c38d2300b3 283 SUPERFAMILY SSF117396 1 268 1.03E-85 T 12-10-2018 IPR036520 UPF0759 superfamily BEN31_04255 6e133eb33750426e24ffab0f092e07d7 262 ProSitePatterns PS00337 Beta-lactamase class-D active site. 70 80 - T 12-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 BEN31_04255 6e133eb33750426e24ffab0f092e07d7 262 Pfam PF00905 Penicillin binding protein transpeptidase domain 60 243 4.8E-33 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_04255 6e133eb33750426e24ffab0f092e07d7 262 SUPERFAMILY SSF56601 43 247 2.54E-32 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_04255 6e133eb33750426e24ffab0f092e07d7 262 Gene3D G3DSA:3.40.710.10 31 260 1.2E-91 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 630 2.2E-30 T 12-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 509 526 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 573 589 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 38 53 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 529 541 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 73 86 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 269 282 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 115 129 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 425 439 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR00418 DNA topoisomerase II family signature 491 507 5.0E-70 T 12-10-2018 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Gene3D G3DSA:3.40.50.670 411 643 2.9E-102 T 12-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 176 1.4E-21 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 9 19 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 183 198 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 363 377 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 377 397 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 610 626 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 198 211 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 475 484 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 222 244 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 PRINTS PR01159 DNA gyrase subunit B signature 594 606 2.7E-57 T 12-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Pfam PF01751 Toprim domain 424 527 1.0E-16 T 12-10-2018 IPR006171 TOPRIM domain BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 7 639 48.424 T 12-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 SMART SM00433 38 634 0.0 T 12-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 ProSitePatterns PS00177 DNA topoisomerase II signature. 427 435 - T 12-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Gene3D G3DSA:3.30.565.10 6 221 1.2E-87 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 SUPERFAMILY SSF56719 399 634 8.11E-87 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Pfam PF00204 DNA gyrase B 223 393 1.4E-58 T 12-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 SUPERFAMILY SSF54211 223 393 1.04E-52 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 SUPERFAMILY SSF55874 9 220 1.31E-68 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 8 643 0.0 T 12-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 Gene3D G3DSA:3.30.230.10 222 403 1.3E-70 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_07325 9cc9fc01ccfdfcb9a8ba18a2ce958357 655 SMART SM00387 34 178 6.1E-25 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 265 2.7E-80 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 Gene3D G3DSA:1.10.3730.10 163 270 3.5E-36 T 12-10-2018 BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 98 5.9E-20 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 SUPERFAMILY SSF48179 160 268 1.12E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 PIRSF PIRSF000193 1 268 1.6E-74 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 Gene3D G3DSA:3.40.50.720 1 162 3.7E-48 T 12-10-2018 BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 265 7.1E-32 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 SUPERFAMILY SSF51735 3 159 3.78E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05400 ccdc9b554b373fd43be9eb638b7fdbed 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 265 25.381 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 Pfam PF17203 Single cache domain 3 40 174 3.5E-9 T 12-10-2018 IPR033463 Single cache domain 3 BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 3.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 3.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 3.2E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 326 367 8.7E-8 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 Gene3D G3DSA:3.30.450.20 34 169 2.9E-15 T 12-10-2018 BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 Gene3D G3DSA:3.30.565.10 376 525 9.8E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 428 527 4.2E-16 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 SUPERFAMILY SSF55874 400 526 3.67E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 SUPERFAMILY SSF103190 38 170 2.55E-19 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 SMART SM00387 421 529 6.0E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 SUPERFAMILY SSF55890 327 393 7.98E-10 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BEN31_12175 ec10f7e75001a53a798620be221ae2a0 532 Gene3D G3DSA:3.30.450.20 204 316 1.3E-16 T 12-10-2018 BEN31_10520 adac624764b76778b78e655398d4d3c6 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.456 T 12-10-2018 IPR007551 Protein of unknown function DUF520 BEN31_10520 adac624764b76778b78e655398d4d3c6 163 Gene3D G3DSA:3.30.70.990 12 101 2.7E-60 T 12-10-2018 IPR035570 UPF0234, N-terminal BEN31_10520 adac624764b76778b78e655398d4d3c6 163 SUPERFAMILY SSF89963 92 163 1.75E-25 T 12-10-2018 IPR036183 YajQ-like superfamily BEN31_10520 adac624764b76778b78e655398d4d3c6 163 SUPERFAMILY SSF89963 6 89 1.15E-29 T 12-10-2018 IPR036183 YajQ-like superfamily BEN31_10520 adac624764b76778b78e655398d4d3c6 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 4.2E-61 T 12-10-2018 IPR007551 Protein of unknown function DUF520 BEN31_10520 adac624764b76778b78e655398d4d3c6 163 Gene3D G3DSA:3.30.70.860 6 163 2.7E-60 T 12-10-2018 IPR035571 UPF0234-like, C-terminal BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 10 313 6.6E-109 T 12-10-2018 IPR017861 Kae1/TsaD family BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 ProSitePatterns PS01016 Glycoprotease family signature. 102 122 - T 12-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 7 338 64.298 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 136 148 1.2E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 103 122 1.2E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 82 102 1.2E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 1.2E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 1.2E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 10 23 1.2E-51 T 12-10-2018 IPR017861 Kae1/TsaD family BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 9 320 5.6E-134 T 12-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 SUPERFAMILY SSF53067 107 315 3.11E-45 T 12-10-2018 BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 SUPERFAMILY SSF53067 9 128 1.67E-31 T 12-10-2018 BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 Gene3D G3DSA:3.30.420.40 134 300 2.2E-123 T 12-10-2018 BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 Pfam PF00814 Glycoprotease family 29 313 1.7E-105 T 12-10-2018 IPR000905 Gcp-like domain BEN31_12925 a1cff4cd824d08f9f1106c66ac4a9cb6 342 Gene3D G3DSA:3.30.420.40 9 322 2.2E-123 T 12-10-2018 BEN31_04750 582af8fb23d5671fe87b61f69ea55fb3 261 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_04750 582af8fb23d5671fe87b61f69ea55fb3 261 SMART SM00382 30 219 5.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_04750 582af8fb23d5671fe87b61f69ea55fb3 261 SUPERFAMILY SSF52540 3 217 1.78E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04750 582af8fb23d5671fe87b61f69ea55fb3 261 Gene3D G3DSA:3.40.50.300 1 255 2.7E-63 T 12-10-2018 BEN31_04750 582af8fb23d5671fe87b61f69ea55fb3 261 Pfam PF00005 ABC transporter 22 169 1.7E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF52151 1400 1686 2.62E-66 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF51735 1769 1996 6.24E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF55048 1527 1587 9.42E-8 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:3.40.366.10 1401 1703 1.6E-136 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF53901 19 438 1.35E-83 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1403 1696 7.7E-90 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF00550 Phosphopantetheine attachment site 2309 2372 9.7E-12 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF00550 Phosphopantetheine attachment site 801 863 1.9E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:3.30.70.3050 486 523 4.0E-189 T 12-10-2018 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:3.40.47.10 20 485 4.0E-189 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:1.10.1200.10 794 874 5.5E-10 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF52151 586 676 7.32E-7 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 1047 1063 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2017 2220 3.8E-37 T 12-10-2018 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SMART SM00823 Phosphopantetheine attachment site 798 867 0.016 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SMART SM00823 Phosphopantetheine attachment site 2307 2376 0.0014 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2331 2346 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SMART SM00825 Beta-ketoacyl synthase 20 442 4.7E-169 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SMART SM00825 Beta-ketoacyl synthase 889 1311 1.4E-168 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF53901 885 1307 5.33E-83 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 178 194 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:3.40.50.720 1759 2268 7.2E-87 T 12-10-2018 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:3.40.50.1820 2297 2400 2.6E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 19 265 1.5E-68 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 888 1134 1.1E-65 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF51735 2015 2253 4.58E-30 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF47336 2299 2372 1.83E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:3.30.70.3290 1324 1748 1.6E-136 T 12-10-2018 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 SUPERFAMILY SSF47336 797 901 3.66E-15 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF00698 Acyl transferase domain 1401 1686 5.1E-49 T 12-10-2018 IPR014043 Acyl transferase BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF08659 KR domain 2017 2217 9.8E-42 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 392 501 4.6E-18 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 1261 1373 1.1E-20 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 1142 1259 8.5E-42 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 273 389 4.0E-42 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN31_12460 a349801026d9324cf9e9157de35cdc49 2414 Gene3D G3DSA:3.40.47.10 883 1309 2.2E-159 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_04825 a453dab1fb5ae864275ff21cd247784e 308 SUPERFAMILY SSF161098 29 302 4.97E-39 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04825 a453dab1fb5ae864275ff21cd247784e 308 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 29 306 8.0E-88 T 12-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 BEN31_04825 a453dab1fb5ae864275ff21cd247784e 308 Gene3D G3DSA:1.10.3720.10 81 307 1.9E-38 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04825 a453dab1fb5ae864275ff21cd247784e 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 307 1.9E-31 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_09430 d17933558b488fbcc7d596d2e46bd781 243 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 240 36.755 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BEN31_09430 d17933558b488fbcc7d596d2e46bd781 243 Pfam PF04055 Radical SAM superfamily 29 125 2.9E-13 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_09430 d17933558b488fbcc7d596d2e46bd781 243 PIRSF PIRSF000370 3 243 6.5E-52 T 12-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BEN31_09430 d17933558b488fbcc7d596d2e46bd781 243 Pfam PF13394 4Fe-4S single cluster domain 27 115 1.5E-10 T 12-10-2018 BEN31_09430 d17933558b488fbcc7d596d2e46bd781 243 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 4 243 7.3E-116 T 12-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 BEN31_09430 d17933558b488fbcc7d596d2e46bd781 243 SUPERFAMILY SSF102114 27 164 7.32E-14 T 12-10-2018 BEN31_09430 d17933558b488fbcc7d596d2e46bd781 243 Gene3D G3DSA:3.20.20.70 5 236 1.3E-31 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Gene3D G3DSA:1.10.10.2480 1 71 1.4E-15 T 12-10-2018 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 131 180 1.2E-16 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 48 4.4E-13 T 12-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 210 366 2.7E-42 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Pfam PF11987 Translation-initiation factor 2 493 597 1.8E-38 T 12-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 ProSitePatterns PS01176 Initiation factor 2 signature. 658 680 - T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Gene3D G3DSA:3.40.50.300 204 378 4.5E-75 T 12-10-2018 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 123 705 1.5E-285 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 SUPERFAMILY SSF52156 485 614 6.67E-41 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 SUPERFAMILY SSF52540 199 379 2.42E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Gene3D G3DSA:2.40.30.10 609 706 2.6E-32 T 12-10-2018 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 SUPERFAMILY SSF50447 608 705 1.64E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 SUPERFAMILY SSF50447 379 462 7.54E-26 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 705 17.586 T 12-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Gene3D G3DSA:3.40.50.10050 501 608 2.4E-40 T 12-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Gene3D G3DSA:2.40.30.10 379 496 5.1E-42 T 12-10-2018 BEN31_07965 7b4f169dc86fe4a9764e0fbe3571cff5 706 Pfam PF00009 Elongation factor Tu GTP binding domain 212 367 6.6E-36 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_08975 b8f74ba35c9fb1075e1f4b7e449414ff 211 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 1.1E-85 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 BEN31_08975 b8f74ba35c9fb1075e1f4b7e449414ff 211 Hamap MF_01851 UPF0637 protein . 5 205 38.046 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 BEN31_08975 b8f74ba35c9fb1075e1f4b7e449414ff 211 PIRSF PIRSF021332 1 209 3.6E-89 T 12-10-2018 IPR009403 Protein of unknown function UPF0637 BEN31_08975 b8f74ba35c9fb1075e1f4b7e449414ff 211 Gene3D G3DSA:3.30.930.20 1 211 3.7E-90 T 12-10-2018 BEN31_08975 b8f74ba35c9fb1075e1f4b7e449414ff 211 SUPERFAMILY SSF142913 4 208 8.11E-86 T 12-10-2018 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 SMART SM00382 56 227 3.1E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 SUPERFAMILY SSF54752 267 326 1.83E-21 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 ProSitePatterns PS00321 recA signature. 212 220 - T 12-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 323 1.5E-176 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 Hamap MF_00268 Protein RecA [recA]. 4 328 53.139 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 Gene3D G3DSA:3.30.250.10 267 343 2.8E-28 T 12-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 SUPERFAMILY SSF52540 3 266 7.36E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 Gene3D G3DSA:3.40.50.300 25 266 1.1E-81 T 12-10-2018 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 Pfam PF00154 recA bacterial DNA recombination protein 7 267 3.5E-147 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 PRINTS PR00142 RecA protein signature 296 313 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 PRINTS PR00142 RecA protein signature 92 121 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 PRINTS PR00142 RecA protein signature 126 155 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 PRINTS PR00142 RecA protein signature 209 237 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 PRINTS PR00142 RecA protein signature 242 271 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_07800 6c61bf2bfc3c760bde527c0b3f09875d 346 PRINTS PR00142 RecA protein signature 164 193 3.8E-85 T 12-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Gene3D G3DSA:3.10.310.40 766 876 2.4E-36 T 12-10-2018 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Gene3D G3DSA:3.30.54.20 626 679 4.1E-51 T 12-10-2018 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Pfam PF01411 tRNA synthetases class II (A) 8 556 1.7E-212 T 12-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 SUPERFAMILY SSF50447 455 554 6.42E-19 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Gene3D G3DSA:3.30.930.10 3 242 3.8E-94 T 12-10-2018 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 SMART SM00863 655 698 1.4E-21 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 185.714 T 12-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 9.2E-19 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 SUPERFAMILY SSF101353 246 438 1.57E-69 T 12-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Gene3D G3DSA:2.40.30.130 477 556 6.4E-10 T 12-10-2018 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 4.5E-32 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Gene3D G3DSA:3.30.980.10 564 699 4.1E-51 T 12-10-2018 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 SUPERFAMILY SSF55186 556 720 7.06E-53 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 SUPERFAMILY SSF55681 5 245 8.7E-89 T 12-10-2018 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 12-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 BEN31_04085 3db34b8509650ca0122a25cae4ff0df4 878 Pfam PF02272 DHHA1 domain 735 873 2.8E-30 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 SUPERFAMILY SSF56014 429 561 1.57E-35 T 12-10-2018 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 417 7.9E-13 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 75 131 1.9E-14 T 12-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 SUPERFAMILY SSF55124 13 145 2.62E-33 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 559 2.1E-4 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 SUPERFAMILY SSF56014 146 344 1.2E-58 T 12-10-2018 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 8 571 57.549 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 17 560 3.4E-281 T 12-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 Gene3D G3DSA:3.30.413.10 427 568 1.3E-37 T 12-10-2018 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 479 495 - T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 PRINTS PR00397 Sirohaem Fe-binding site signature 479 497 1.6E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 PRINTS PR00397 Sirohaem Fe-binding site signature 431 449 1.6E-8 T 12-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 328 3.0E-47 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_07025 61cbd2450d42513a85c2a83a151378d6 572 SUPERFAMILY SSF55124 346 422 9.91E-22 T 12-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_09900 4f5a49181b3f3d383044a311d6ac1580 332 Pfam PF01384 Phosphate transporter family 22 320 8.8E-90 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Gene3D G3DSA:3.90.320.10 990 1232 7.1E-77 T 12-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 463 2.2E-94 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 SUPERFAMILY SSF52980 1014 1226 2.68E-38 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Pfam PF13361 UvrD-like helicase C-terminal domain 473 883 9.1E-34 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 SUPERFAMILY SSF52540 3 888 1.69E-121 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 10 1232 0.0 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 8 1234 20.169 T 12-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Gene3D G3DSA:3.40.50.300 476 758 5.8E-59 T 12-10-2018 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Gene3D G3DSA:3.40.50.300 759 959 9.7E-49 T 12-10-2018 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Gene3D G3DSA:3.40.50.300 2 192 1.3E-40 T 12-10-2018 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Gene3D G3DSA:3.40.50.300 281 475 2.7E-32 T 12-10-2018 BEN31_10690 0a94baf7d74be1e6dd1db2693f897ebd 1234 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1052 1225 1.5E-10 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BEN31_17205 140b59e63252b00b1fd61f8b48b47798 374 Pfam PF03102 NeuB family 37 272 1.2E-78 T 12-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 BEN31_17205 140b59e63252b00b1fd61f8b48b47798 374 SUPERFAMILY SSF51569 4 276 1.11E-81 T 12-10-2018 BEN31_17205 140b59e63252b00b1fd61f8b48b47798 374 Pfam PF08666 SAF domain 310 365 2.2E-8 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BEN31_17205 140b59e63252b00b1fd61f8b48b47798 374 Gene3D G3DSA:3.90.1210.10 306 373 2.0E-23 T 12-10-2018 BEN31_17205 140b59e63252b00b1fd61f8b48b47798 374 SMART SM00858 305 366 1.4E-5 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BEN31_17205 140b59e63252b00b1fd61f8b48b47798 374 SUPERFAMILY SSF51269 300 365 1.73E-16 T 12-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 BEN31_17205 140b59e63252b00b1fd61f8b48b47798 374 Gene3D G3DSA:3.20.20.70 1 305 4.9E-111 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 9.4E-150 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 SUPERFAMILY SSF52210 123 287 1.31E-55 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 Pfam PF00549 CoA-ligase 151 267 9.9E-19 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 Gene3D G3DSA:3.40.50.720 1 123 1.2E-52 T 12-10-2018 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 PIRSF PIRSF001553 1 291 3.5E-135 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 12-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 SMART SM00881 4 100 1.6E-35 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 Gene3D G3DSA:3.40.50.261 124 289 1.2E-72 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.2E-40 T 12-10-2018 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.2E-40 T 12-10-2018 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.2E-40 T 12-10-2018 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.2E-40 T 12-10-2018 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 12-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 44.021 T 12-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 Pfam PF02629 CoA binding domain 6 99 1.6E-31 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BEN31_08255 549fdb33b1a1ff80a3d28ba22b1b9890 300 SUPERFAMILY SSF51735 1 122 4.22E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 Gene3D G3DSA:3.60.20.10 12 458 1.2E-177 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 PIRSF PIRSF000485 8 473 4.5E-191 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 SUPERFAMILY SSF53271 247 470 1.1E-77 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 Pfam PF00156 Phosphoribosyl transferase domain 269 382 3.4E-8 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 Gene3D G3DSA:3.40.50.2020 271 435 1.2E-177 T 12-10-2018 BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 SUPERFAMILY SSF56235 12 237 1.46E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 456 47.617 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 Pfam PF13522 Glutamine amidotransferase domain 75 205 2.4E-21 T 12-10-2018 BEN31_12630 a584f6c86c1cca80d2b0aa07226432f8 476 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 457 2.8E-174 T 12-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 BEN31_07590 97e90475002baf931072b492433268c0 157 SUPERFAMILY SSF160424 3 154 6.15E-50 T 12-10-2018 IPR036170 Probable antitoxin YezG superfamily BEN31_07590 97e90475002baf931072b492433268c0 157 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 151 8.4E-36 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BEN31_07590 97e90475002baf931072b492433268c0 157 Pfam PF04634 Protein of unknown function, DUF600 6 150 3.4E-54 T 12-10-2018 IPR006728 Protein of unknown function DUF600 BEN31_07590 97e90475002baf931072b492433268c0 157 Gene3D G3DSA:3.30.500.20 2 118 3.7E-40 T 12-10-2018 BEN31_07400 aec525ffdeeff26f176b89bb6f1f5d78 142 Pfam PF11084 Protein of unknown function (DUF2621) 4 141 1.5E-73 T 12-10-2018 IPR020203 Uncharacterised protein family, YneK BEN31_07400 aec525ffdeeff26f176b89bb6f1f5d78 142 ProDom PD086666 YNEK BH2332 11 140 9.0E-44 T 12-10-2018 IPR020203 Uncharacterised protein family, YneK BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 3.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 3.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 3.9E-36 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 Gene3D G3DSA:3.40.50.720 1 241 5.0E-70 T 12-10-2018 BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 240 2.0E-51 T 12-10-2018 BEN31_07830 cfc093ad176510e2d93735d464ae2891 242 SUPERFAMILY SSF51735 3 241 1.99E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17730 c847114b042b489af0fda2bb05cbe3a2 599 SMART SM00382 373 565 1.6E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_17730 c847114b042b489af0fda2bb05cbe3a2 599 Gene3D G3DSA:3.40.50.300 338 598 2.0E-72 T 12-10-2018 BEN31_17730 c847114b042b489af0fda2bb05cbe3a2 599 Gene3D G3DSA:1.20.1560.10 10 324 2.2E-22 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_17730 c847114b042b489af0fda2bb05cbe3a2 599 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_17730 c847114b042b489af0fda2bb05cbe3a2 599 SUPERFAMILY SSF90123 12 317 5.76E-33 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_17730 c847114b042b489af0fda2bb05cbe3a2 599 SUPERFAMILY SSF52540 343 589 1.44E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17730 c847114b042b489af0fda2bb05cbe3a2 599 Pfam PF00005 ABC transporter 365 519 6.1E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_17565 fb78057f571c3c64eadfe64a4705dd44 351 Gene3D G3DSA:3.90.870.10 10 221 2.0E-82 T 12-10-2018 BEN31_17565 fb78057f571c3c64eadfe64a4705dd44 351 PIRSF PIRSF004930 3 349 6.9E-131 T 12-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 BEN31_17565 fb78057f571c3c64eadfe64a4705dd44 351 Gene3D G3DSA:3.40.50.11030 224 351 2.1E-40 T 12-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily BEN31_17565 fb78057f571c3c64eadfe64a4705dd44 351 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 22 215 6.8E-67 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 BEN31_17565 fb78057f571c3c64eadfe64a4705dd44 351 Pfam PF01300 Telomere recombination 29 205 4.0E-59 T 12-10-2018 IPR006070 YrdC-like domain GO:0003725 BEN31_17565 fb78057f571c3c64eadfe64a4705dd44 351 Pfam PF03481 Putative GTP-binding controlling metal-binding 207 343 2.0E-28 T 12-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain BEN31_17565 fb78057f571c3c64eadfe64a4705dd44 351 SUPERFAMILY SSF55821 20 217 1.34E-65 T 12-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily BEN31_10195 2dc9627c7ad9891ac094cf76a558b196 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 1.2E-20 T 12-10-2018 IPR010035 ThiS, thiamine-biosynthesis BEN31_10195 2dc9627c7ad9891ac094cf76a558b196 67 Gene3D G3DSA:3.10.20.30 1 67 2.5E-18 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BEN31_10195 2dc9627c7ad9891ac094cf76a558b196 67 SUPERFAMILY SSF54285 2 66 7.48E-17 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BEN31_10195 2dc9627c7ad9891ac094cf76a558b196 67 Pfam PF02597 ThiS family 3 67 8.4E-11 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BEN31_02600 eabaef8c2cd6d8c5734078ad4c9d4977 632 PIRSF PIRSF001589 1 628 5.4E-198 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN31_02600 eabaef8c2cd6d8c5734078ad4c9d4977 632 Pfam PF00733 Asparagine synthase 240 610 4.4E-113 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BEN31_02600 eabaef8c2cd6d8c5734078ad4c9d4977 632 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 547 2.5E-183 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN31_02600 eabaef8c2cd6d8c5734078ad4c9d4977 632 SUPERFAMILY SSF52402 232 605 7.12E-86 T 12-10-2018 BEN31_02600 eabaef8c2cd6d8c5734078ad4c9d4977 632 SUPERFAMILY SSF56235 1 225 4.29E-62 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_02600 eabaef8c2cd6d8c5734078ad4c9d4977 632 Gene3D G3DSA:3.60.20.10 3 189 1.9E-65 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_02600 eabaef8c2cd6d8c5734078ad4c9d4977 632 Pfam PF13537 Glutamine amidotransferase domain 51 168 1.8E-45 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 Gene3D G3DSA:3.40.50.720 231 442 1.6E-75 T 12-10-2018 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 PIRSF PIRSF500134 3 435 6.7E-180 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 413 6.3E-141 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 200 292 2.5E-39 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 PIRSF PIRSF000124 3 432 3.5E-143 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 186 7.8E-68 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 SUPERFAMILY SSF51735 3 194 8.81E-51 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 SUPERFAMILY SSF48179 200 297 2.61E-33 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 Gene3D G3DSA:3.40.50.720 1 198 9.7E-75 T 12-10-2018 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 SUPERFAMILY SSF52413 300 427 3.14E-35 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 Gene3D G3DSA:1.20.5.100 199 230 2.2E-19 T 12-10-2018 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 416 2.7E-28 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_18200 954b3b71e5d62c17bbd5a4258628e866 444 SMART SM00984 315 417 1.1E-40 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_12645 5b36fc5f3a5d3bdf6ec17881ef3518db 84 Gene3D G3DSA:3.30.1280.10 1 84 1.2E-37 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12645 5b36fc5f3a5d3bdf6ec17881ef3518db 84 SUPERFAMILY SSF82697 1 80 5.23E-30 T 12-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12645 5b36fc5f3a5d3bdf6ec17881ef3518db 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 1.4E-32 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12645 5b36fc5f3a5d3bdf6ec17881ef3518db 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 4.0E-33 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12645 5b36fc5f3a5d3bdf6ec17881ef3518db 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 2.0E-36 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12645 5b36fc5f3a5d3bdf6ec17881ef3518db 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.792 T 12-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_06360 d1130dcd38ef13ef6b601b36128c3f7b 322 SUPERFAMILY SSF52540 9 215 1.63E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06360 d1130dcd38ef13ef6b601b36128c3f7b 322 Gene3D G3DSA:3.40.50.300 8 148 3.6E-26 T 12-10-2018 BEN31_06360 d1130dcd38ef13ef6b601b36128c3f7b 322 Pfam PF14532 Sigma-54 interaction domain 24 148 2.4E-15 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN31_06360 d1130dcd38ef13ef6b601b36128c3f7b 322 Gene3D G3DSA:1.10.8.60 149 220 5.5E-13 T 12-10-2018 BEN31_06360 d1130dcd38ef13ef6b601b36128c3f7b 322 SMART SM00382 29 141 0.002 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 Gene3D G3DSA:1.10.60.40 332 422 6.3E-129 T 12-10-2018 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 Gene3D G3DSA:3.40.720.10 51 451 6.3E-129 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 ProSitePatterns PS00123 Alkaline phosphatase active site. 102 110 - T 12-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 SMART SM00098 48 463 6.2E-137 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 SUPERFAMILY SSF53649 38 460 3.34E-109 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 Pfam PF00245 Alkaline phosphatase 48 460 1.2E-108 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 PRINTS PR00113 Alkaline phosphatase signature 256 285 1.1E-26 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 PRINTS PR00113 Alkaline phosphatase signature 102 117 1.1E-26 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 PRINTS PR00113 Alkaline phosphatase signature 139 159 1.1E-26 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 PRINTS PR00113 Alkaline phosphatase signature 189 199 1.1E-26 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_12445 4052fdb40309f18e37b28e736c034b79 468 PRINTS PR00113 Alkaline phosphatase signature 47 67 1.1E-26 T 12-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 Pfam PF00581 Rhodanese-like domain 93 181 7.1E-16 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 12-10-2018 IPR001455 TusA-like domain BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 Pfam PF01206 Sulfurtransferase TusA 7 75 1.3E-19 T 12-10-2018 IPR001455 TusA-like domain BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 SMART SM00450 91 186 2.2E-22 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 Gene3D G3DSA:3.40.250.10 85 186 2.7E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 SUPERFAMILY SSF64307 2 75 1.07E-21 T 12-10-2018 IPR036868 TusA-like domain superfamily BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 ProSitePatterns PS00380 Rhodanese signature 1. 116 127 - T 12-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 SUPERFAMILY SSF52821 87 183 6.42E-31 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_14540 81b7b1d5ed11e321c4e451450c6174a6 186 Gene3D G3DSA:3.30.110.40 2 76 3.1E-26 T 12-10-2018 IPR036868 TusA-like domain superfamily BEN31_03425 411da72cde40ffe2a073dfe0a23cb161 85 Pfam PF05164 Cell division protein ZapA 10 82 1.1E-16 T 12-10-2018 IPR007838 Cell division protein ZapA-like BEN31_03425 411da72cde40ffe2a073dfe0a23cb161 85 SUPERFAMILY SSF102829 10 84 5.1E-20 T 12-10-2018 IPR036192 Cell division protein ZapA-like superfamily BEN31_03425 411da72cde40ffe2a073dfe0a23cb161 85 Hamap MF_02013 Cell division protein ZapA [zapA]. 1 85 27.251 T 12-10-2018 IPR023688 Cell division protein ZapA, firmicutes GO:0051301 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 SUPERFAMILY SSF51735 5 157 2.77E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 230 244 - T 12-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 5.3E-161 T 12-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 SUPERFAMILY SSF55347 129 321 1.88E-76 T 12-10-2018 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 4.8E-34 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 Gene3D G3DSA:3.30.360.10 128 317 9.3E-140 T 12-10-2018 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 320 4.9E-62 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 Gene3D G3DSA:3.40.50.720 7 331 9.3E-140 T 12-10-2018 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 PIRSF PIRSF000148 4 339 2.8E-132 T 12-10-2018 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 SMART SM00859 6 121 1.6E-42 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN31_07900 2dac0355d19fb35e10451fb1aa63b6cf 339 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 334 38.228 T 12-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_05780 d9fccd5132d5697c88712e8805565b4c 262 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 52 207 3.4E-13 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BEN31_05780 d9fccd5132d5697c88712e8805565b4c 262 Gene3D G3DSA:3.60.21.10 50 240 1.5E-21 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_05780 d9fccd5132d5697c88712e8805565b4c 262 SUPERFAMILY SSF56300 50 256 4.56E-30 T 12-10-2018 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SUPERFAMILY SSF88723 3 172 5.89E-55 T 12-10-2018 IPR029060 PIN-like domain superfamily BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Gene3D G3DSA:1.10.150.20 176 249 4.3E-99 T 12-10-2018 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SUPERFAMILY SSF56672 473 879 4.78E-160 T 12-10-2018 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SUPERFAMILY SSF47807 173 288 7.92E-35 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Gene3D G3DSA:3.30.70.370 614 875 5.5E-111 T 12-10-2018 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Pfam PF00476 DNA polymerase family A 501 877 1.4E-162 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 ProSitePatterns PS00447 DNA polymerase family A signature. 705 724 - T 12-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Gene3D G3DSA:3.40.50.1010 7 280 4.3E-99 T 12-10-2018 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Gene3D G3DSA:3.30.420.10 301 492 2.4E-59 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Gene3D G3DSA:1.10.150.20 660 803 5.5E-111 T 12-10-2018 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 172 3.4E-53 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SUPERFAMILY SSF53098 304 470 8.19E-43 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SMART SM00474 291 469 1.6E-15 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 694 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 628 643 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 605 627 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 826 839 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 764 775 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 730 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 674 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 742 753 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 812 1.4E-80 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Gene3D G3DSA:1.20.1060.10 494 608 1.1E-44 T 12-10-2018 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SMART SM00482 636 843 7.7E-121 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 267 4.6E-35 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SMART SM00279 175 210 2.6E-18 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 TIGRFAM TIGR00593 pola: DNA polymerase I 7 879 0.0 T 12-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03270 1e43e8850b215623726010f0bcf574de 879 SMART SM00475 5 264 3.0E-151 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 SMART SM00387 361 476 9.0E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 SUPERFAMILY SSF55874 323 473 2.36E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 SUPERFAMILY SSF158472 201 250 1.7E-8 T 12-10-2018 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 SMART SM00304 199 252 2.4E-6 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 Gene3D G3DSA:1.20.1480.50 162 258 2.6E-16 T 12-10-2018 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 Pfam PF00672 HAMP domain 201 246 4.9E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 1.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 412 1.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 1.0E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 Pfam PF06580 Histidine kinase 267 346 1.3E-23 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 Gene3D G3DSA:3.30.565.10 319 478 2.5E-20 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_18040 38c287b4d4584964c56c885ac6f833c3 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 366 474 1.9E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 Pfam PF13307 Helicase C-terminal domain 747 904 7.6E-35 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 Gene3D G3DSA:3.40.50.300 715 922 2.0E-38 T 12-10-2018 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 Pfam PF00929 Exonuclease 7 163 5.8E-33 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 5 922 1.7E-242 T 12-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 171 1.3E-29 T 12-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 SUPERFAMILY SSF52540 270 886 2.21E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 Pfam PF06733 DEAD_2 415 472 4.6E-5 T 12-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 SUPERFAMILY SSF53098 5 275 9.28E-53 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 Gene3D G3DSA:3.40.50.300 254 504 1.4E-37 T 12-10-2018 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 Gene3D G3DSA:3.30.420.10 1 172 1.5E-47 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 SMART SM00479 5 172 7.5E-43 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 2 924 25.721 T 12-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 BEN31_06080 a29bc638f09d70a4fef84164c0256b44 930 SMART SM00491 760 892 7.6E-40 T 12-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 BEN31_11030 71cce4ba3cc37eb16595de1ef1e7aa7e 288 Gene3D G3DSA:3.30.1240.10 84 196 1.8E-79 T 12-10-2018 BEN31_11030 71cce4ba3cc37eb16595de1ef1e7aa7e 288 SUPERFAMILY SSF56784 3 273 5.99E-53 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_11030 71cce4ba3cc37eb16595de1ef1e7aa7e 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 241 6.6E-15 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_11030 71cce4ba3cc37eb16595de1ef1e7aa7e 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 268 1.0E-43 T 12-10-2018 IPR000150 Cof family GO:0016787 BEN31_11030 71cce4ba3cc37eb16595de1ef1e7aa7e 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 268 7.8E-49 T 12-10-2018 BEN31_11030 71cce4ba3cc37eb16595de1ef1e7aa7e 288 Gene3D G3DSA:3.40.50.1000 5 265 1.8E-79 T 12-10-2018 IPR023214 HAD superfamily BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Gene3D G3DSA:3.30.1360.40 235 331 8.0E-195 T 12-10-2018 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 705 753 3.9E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 650 5.3E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 654 698 9.1E-13 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 521 2.8 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 598 1.2E-5 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Gene3D G3DSA:3.90.199.10 31 485 8.0E-195 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 SMART SM00434 10 463 1.5E-256 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Gene3D G3DSA:1.10.268.10 368 456 8.0E-195 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 467 2.7E-149 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 803 33.143 T 12-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 SUPERFAMILY SSF56719 30 485 8.24E-167 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 7 745 0.0 T 12-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 800 1.2E-269 T 12-10-2018 BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 Gene3D G3DSA:2.120.10.90 499 811 2.7E-108 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN31_07320 3fde5f2f44316271014b50ea333d4245 812 SUPERFAMILY SSF101904 499 808 3.01E-98 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SMART SM00073 3 100 1.2E-37 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SUPERFAMILY SSF47384 297 357 5.49E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 543 3.9E-15 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Gene3D G3DSA:1.20.120.160 3 135 5.7E-40 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Gene3D G3DSA:3.30.565.10 357 543 1.5E-58 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SUPERFAMILY SSF55874 358 542 1.09E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Pfam PF01584 CheW-like domain 549 675 8.6E-27 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SMART SM01231 296 356 1.1E-18 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SUPERFAMILY SSF55052 163 246 6.28E-24 T 12-10-2018 IPR035891 CheY-binding domain of CheA BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 522 1.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 541 1.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 1.8E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SMART SM00260 536 675 2.7E-46 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Gene3D G3DSA:2.30.30.40 544 670 1.2E-38 T 12-10-2018 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Pfam PF07194 P2 response regulator binding domain 166 246 1.7E-24 T 12-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SUPERFAMILY SSF47226 3 112 5.23E-33 T 12-10-2018 IPR036641 HPT domain superfamily GO:0000160 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Gene3D G3DSA:1.10.287.560 296 356 2.1E-19 T 12-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 297 355 9.8E-14 T 12-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Gene3D G3DSA:2.40.50.180 567 630 1.2E-38 T 12-10-2018 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Gene3D G3DSA:3.30.70.1110 163 247 2.9E-27 T 12-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 Pfam PF01627 Hpt domain 5 99 1.4E-20 T 12-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SUPERFAMILY SSF50341 543 675 1.83E-33 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN31_08085 2f37e4e4e9e9ce44452982ac942f685b 676 SMART SM00387 401 544 2.2E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_18170 c7ee87fbcdb7d0caa2370aedfe5d6e91 703 Pfam PF08486 Stage II sporulation protein 413 489 6.0E-23 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal BEN31_18170 c7ee87fbcdb7d0caa2370aedfe5d6e91 703 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 412 701 2.8E-78 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 BEN31_18170 c7ee87fbcdb7d0caa2370aedfe5d6e91 703 Pfam PF04122 Putative cell wall binding repeat 2 64 150 3.8E-16 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BEN31_18170 c7ee87fbcdb7d0caa2370aedfe5d6e91 703 Pfam PF04122 Putative cell wall binding repeat 2 252 338 3.4E-12 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BEN31_18170 c7ee87fbcdb7d0caa2370aedfe5d6e91 703 Pfam PF04122 Putative cell wall binding repeat 2 162 241 1.4E-16 T 12-10-2018 IPR007253 Putative cell wall binding repeat 2 BEN31_18170 c7ee87fbcdb7d0caa2370aedfe5d6e91 703 Gene3D G3DSA:3.40.50.12090 182 271 3.3E-6 T 12-10-2018 BEN31_18170 c7ee87fbcdb7d0caa2370aedfe5d6e91 703 Gene3D G3DSA:3.40.50.12090 87 180 1.7E-7 T 12-10-2018 BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 PIRSF PIRSF004749 2 185 1.3E-48 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 Gene3D G3DSA:3.90.45.10 1 184 5.7E-68 T 12-10-2018 IPR036821 Peptide deformylase superfamily BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 177 1.7E-52 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 SUPERFAMILY SSF56420 2 176 9.81E-61 T 12-10-2018 IPR036821 Peptide deformylase superfamily BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 PRINTS PR01576 Peptide deformylase signature 108 119 1.5E-32 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 PRINTS PR01576 Peptide deformylase signature 121 139 1.5E-32 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 PRINTS PR01576 Peptide deformylase signature 140 169 1.5E-32 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 PRINTS PR01576 Peptide deformylase signature 47 76 1.5E-32 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 Pfam PF01327 Polypeptide deformylase 4 171 1.3E-47 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09030 8475732ac411eb5eea2d36fa1c232df3 185 Hamap MF_00163 Peptide deformylase [def]. 3 182 27.58 T 12-10-2018 IPR023635 Peptide deformylase BEN31_09670 7ec238380c511f591233ea292fb7d8ed 148 Gene3D G3DSA:1.10.10.10 1 146 3.7E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09670 7ec238380c511f591233ea292fb7d8ed 148 SUPERFAMILY SSF46785 5 144 7.66E-35 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_09670 7ec238380c511f591233ea292fb7d8ed 148 SMART SM00347 31 129 1.1E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09670 7ec238380c511f591233ea292fb7d8ed 148 Pfam PF01047 MarR family 38 96 1.3E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_04625 03aaa27ee2ea5092691aa75e77617d7a 396 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 5 388 2.2E-112 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD BEN31_04625 03aaa27ee2ea5092691aa75e77617d7a 396 PIRSF PIRSF029895 1 396 3.0E-175 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD BEN31_04625 03aaa27ee2ea5092691aa75e77617d7a 396 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 386 1.7E-116 T 12-10-2018 IPR010690 Putative stage IV sporulation YqfD BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 Pfam PF04542 Sigma-70 region 2 43 111 6.4E-17 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 SUPERFAMILY SSF88659 176 257 3.92E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 Gene3D G3DSA:1.10.10.10 112 165 2.1E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PRINTS PR00046 Major sigma-70 factor signature 67 80 2.3E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PRINTS PR00046 Major sigma-70 factor signature 211 223 2.3E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PRINTS PR00046 Major sigma-70 factor signature 243 254 2.3E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PRINTS PR00046 Major sigma-70 factor signature 228 243 2.3E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PRINTS PR00046 Major sigma-70 factor signature 91 99 2.3E-12 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 67 80 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 Gene3D G3DSA:1.20.120.1810 3 111 4.9E-27 T 12-10-2018 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 SUPERFAMILY SSF88659 115 191 2.7E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 Pfam PF04545 Sigma-70, region 4 208 254 3.1E-13 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 228 254 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 258 1.6E-156 T 12-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 SUPERFAMILY SSF88946 14 111 5.49E-33 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 Gene3D G3DSA:1.10.10.10 186 258 1.7E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 Pfam PF04539 Sigma-70 region 3 125 176 1.6E-6 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 257 1.2E-83 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PIRSF PIRSF000770 124 158 2.5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PIRSF PIRSF000770 15 123 3.6E-17 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 PIRSF PIRSF000770 160 259 5.8E-14 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08660 39c478428cc40566e00ee7eec07672cc 259 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 257 7.3E-35 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 Pfam PF01728 FtsJ-like methyltransferase 62 243 2.1E-18 T 12-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 3.0E-94 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 Gene3D G3DSA:3.40.50.150 65 282 2.5E-83 T 12-10-2018 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 SUPERFAMILY SSF53335 56 244 2.93E-21 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 Gene3D G3DSA:3.10.290.10 2 64 6.0E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 Pfam PF01479 S4 domain 6 47 1.1E-7 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 PIRSF PIRSF005578 1 269 3.3E-104 T 12-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 SMART SM00363 6 71 1.4E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_05165 36b2cf1d38505c865e2dc4d86ff6fff8 284 SUPERFAMILY SSF55174 5 71 1.0E-11 T 12-10-2018 BEN31_11070 efd559734912b58aeb1e9d69f4c44d5e 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BEN31_11070 efd559734912b58aeb1e9d69f4c44d5e 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BEN31_11070 efd559734912b58aeb1e9d69f4c44d5e 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 1.7E-22 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BEN31_11070 efd559734912b58aeb1e9d69f4c44d5e 67 Gene3D G3DSA:1.10.8.910 8 67 7.2E-31 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BEN31_00610 ca8e70acbb0ba244594fe86a42e9d87b 255 Pfam PF00005 ABC transporter 17 160 1.5E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00610 ca8e70acbb0ba244594fe86a42e9d87b 255 SUPERFAMILY SSF52540 9 218 3.77E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00610 ca8e70acbb0ba244594fe86a42e9d87b 255 SMART SM00382 26 208 2.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_00610 ca8e70acbb0ba244594fe86a42e9d87b 255 Gene3D G3DSA:3.40.50.300 2 240 8.5E-42 T 12-10-2018 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 Gene3D G3DSA:3.90.1150.10 23 385 7.4E-152 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 Pfam PF00202 Aminotransferase class-III 15 393 9.7E-134 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 5 392 4.1E-163 T 12-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 Gene3D G3DSA:3.40.640.10 58 306 7.4E-152 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 SUPERFAMILY SSF53383 2 395 4.57E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 Hamap MF_01689 Ornithine aminotransferase [rocD]. 4 396 65.734 T 12-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 PIRSF PIRSF000521 174 397 3.3E-30 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_00565 0a2efab9a85b06a5bff31ec8f2ab2ab0 397 PIRSF PIRSF000521 1 159 2.1E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_12935 56f4c83dfcfb84e0d80afd1f6ec11b16 229 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 1.9E-51 T 12-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 BEN31_12935 56f4c83dfcfb84e0d80afd1f6ec11b16 229 SUPERFAMILY SSF53067 108 214 3.63E-13 T 12-10-2018 BEN31_12935 56f4c83dfcfb84e0d80afd1f6ec11b16 229 SUPERFAMILY SSF53067 3 107 1.25E-26 T 12-10-2018 BEN31_12935 56f4c83dfcfb84e0d80afd1f6ec11b16 229 Gene3D G3DSA:3.30.420.40 95 189 6.5E-47 T 12-10-2018 BEN31_12935 56f4c83dfcfb84e0d80afd1f6ec11b16 229 Pfam PF00814 Glycoprotease family 32 198 3.8E-30 T 12-10-2018 IPR000905 Gcp-like domain BEN31_12935 56f4c83dfcfb84e0d80afd1f6ec11b16 229 Gene3D G3DSA:3.30.420.40 3 216 6.5E-47 T 12-10-2018 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 Gene3D G3DSA:3.40.50.2300 158 285 3.3E-53 T 12-10-2018 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 Gene3D G3DSA:1.10.260.40 1 59 6.5E-21 T 12-10-2018 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 SUPERFAMILY SSF47413 1 59 2.25E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 7.1E-20 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 SMART SM00354 1 71 1.5E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 Gene3D G3DSA:3.40.50.2300 63 301 3.3E-53 T 12-10-2018 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.8E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.8E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 SUPERFAMILY SSF53822 61 324 1.96E-49 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_09380 5709f46f7786b09d913b597e10f019f1 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 318 5.0E-25 T 12-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SUPERFAMILY SSF51126 437 605 8.43E-10 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 Pfam PF13229 Right handed beta helix region 241 388 8.1E-8 T 12-10-2018 IPR039448 Right handed beta helix domain BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 Pfam PF13229 Right handed beta helix region 406 573 5.1E-9 T 12-10-2018 IPR039448 Right handed beta helix domain BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SUPERFAMILY SSF51126 136 447 4.64E-27 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 462 484 580.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 408 431 690.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 509 531 12.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 438 461 1300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 308 344 450.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 533 563 2900.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 260 290 6800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 365 386 2400.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 SMART SM00710 236 259 1800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_00920 c85af743d4d7f127b43693eb4168113f 624 Gene3D G3DSA:2.160.20.10 136 484 8.0E-63 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 41.222 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 SMART SM00987 50 210 5.5E-37 T 12-10-2018 BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 Gene3D G3DSA:3.40.470.10 1 225 1.3E-101 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 214 2.2E-86 T 12-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 Pfam PF03167 Uracil DNA glycosylase superfamily 55 210 7.0E-27 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 12-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 SUPERFAMILY SSF52141 4 222 4.58E-95 T 12-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN31_17145 65a0a7b589159935ed2969c1fa8e02ff 226 SMART SM00986 50 210 5.5E-37 T 12-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 BEN31_18490 13909f19370dbdaadd882fe8af2a0835 363 Pfam PF13349 Putative adhesin 104 356 1.3E-17 T 12-10-2018 IPR025164 Putative adhesin BEN31_18490 13909f19370dbdaadd882fe8af2a0835 363 PIRSF PIRSF012569 1 361 5.5E-122 T 12-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 PIRSF PIRSF000429 1 391 2.1E-128 T 12-10-2018 IPR002155 Thiolase GO:0016747 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 SUPERFAMILY SSF53901 1 264 1.32E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 4.1E-139 T 12-10-2018 IPR002155 Thiolase GO:0016747 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.2E-48 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 1.0E-75 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 Gene3D G3DSA:3.40.47.10 128 387 2.3E-147 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 SUPERFAMILY SSF53901 269 390 2.3E-42 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_01315 a6aadcfec194c3e2be048a148dd583fb 391 Gene3D G3DSA:3.40.47.10 5 274 2.3E-147 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_08650 4bbc5c7529f786bb0a65973f06fd5c36 414 Gene3D G3DSA:3.40.50.720 10 160 1.6E-18 T 12-10-2018 BEN31_08650 4bbc5c7529f786bb0a65973f06fd5c36 414 SUPERFAMILY SSF51735 16 136 1.26E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_08650 4bbc5c7529f786bb0a65973f06fd5c36 414 Pfam PF08666 SAF domain 329 394 5.0E-7 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BEN31_08650 4bbc5c7529f786bb0a65973f06fd5c36 414 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 17 113 5.4E-8 T 12-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_08650 4bbc5c7529f786bb0a65973f06fd5c36 414 SMART SM00858 328 394 9.6E-4 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BEN31_14120 da7a771c0edcd696d5f2de720f2d6ec8 476 Pfam PF03606 C4-dicarboxylate anaerobic carrier 18 469 6.6E-80 T 12-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 BEN31_10665 883f0584036d6cadb2e057af78bbd0b3 143 Pfam PF10970 Spore germination protein GerPE 5 129 9.3E-55 T 12-10-2018 IPR024496 Spore germination protein GerPE BEN31_10665 883f0584036d6cadb2e057af78bbd0b3 143 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 6 121 2.0E-24 T 12-10-2018 IPR024496 Spore germination protein GerPE BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 Gene3D G3DSA:2.170.8.10 38 330 2.5E-225 T 12-10-2018 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 SUPERFAMILY SSF68923 12 212 7.67E-80 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 PIRSF PIRSF006294 1 527 1.3E-241 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 1 527 8.1E-265 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 SUPERFAMILY SSF53795 213 516 2.75E-134 T 12-10-2018 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 Gene3D G3DSA:3.90.228.20 214 513 2.5E-225 T 12-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 528 55.712 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 Gene3D G3DSA:3.40.449.10 28 213 2.5E-225 T 12-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 BEN31_02590 2f4de458e6d9da038d9160e50f518c96 528 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 481 6.0E-224 T 12-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 BEN31_05490 28c8caf4488f07951de0f7698b0789ec 307 PRINTS PR00069 Aldo-keto reductase signature 134 151 1.6E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_05490 28c8caf4488f07951de0f7698b0789ec 307 PRINTS PR00069 Aldo-keto reductase signature 37 61 1.6E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_05490 28c8caf4488f07951de0f7698b0789ec 307 PRINTS PR00069 Aldo-keto reductase signature 103 121 1.6E-7 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_05490 28c8caf4488f07951de0f7698b0789ec 307 Gene3D G3DSA:3.20.20.100 1 296 3.3E-105 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_05490 28c8caf4488f07951de0f7698b0789ec 307 Pfam PF00248 Aldo/keto reductase family 18 292 1.9E-65 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN31_05490 28c8caf4488f07951de0f7698b0789ec 307 SUPERFAMILY SSF51430 2 298 8.9E-79 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 SUPERFAMILY SSF53187 5 369 5.78E-64 T 12-10-2018 BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 Pfam PF07687 Peptidase dimerisation domain 180 273 2.4E-15 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 Pfam PF01546 Peptidase family M20/M25/M40 73 367 4.6E-25 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 367 9.6E-171 T 12-10-2018 IPR010162 Peptidase M20B, peptidase T-like BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 SUPERFAMILY SSF55031 179 284 2.88E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 Gene3D G3DSA:3.30.70.360 176 287 6.4E-134 T 12-10-2018 BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 Gene3D G3DSA:3.40.630.10 14 362 6.4E-134 T 12-10-2018 BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 PIRSF PIRSF001123 4 102 2.0E-5 T 12-10-2018 IPR008007 Peptidase M42 BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 PIRSF PIRSF001123 256 373 7.2E-6 T 12-10-2018 IPR008007 Peptidase M42 BEN31_05300 c7abf5d02793be3182c1f20894f6a629 373 PIRSF PIRSF001123 82 180 2.4E-4 T 12-10-2018 IPR008007 Peptidase M42 BEN31_12685 bc1528f894ab5e22e8849bd891ad5206 441 Pfam PF00860 Permease family 16 402 3.5E-44 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BEN31_12685 bc1528f894ab5e22e8849bd891ad5206 441 PIRSF PIRSF005353 1 441 3.0E-171 T 12-10-2018 IPR026033 Purine permease PbuG-like BEN31_08895 110505d70143aaa2466d5756f4a86d99 307 Pfam PF02628 Cytochrome oxidase assembly protein 8 287 5.3E-32 T 12-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 BEN31_08895 110505d70143aaa2466d5756f4a86d99 307 Hamap MF_01664 Heme A synthase [ctaA]. 1 303 28.279 T 12-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 BEN31_06800 65b39f6f5321ccfe8a5688d68fcfc484 189 Gene3D G3DSA:3.40.630.30 7 161 5.1E-11 T 12-10-2018 BEN31_06800 65b39f6f5321ccfe8a5688d68fcfc484 189 Pfam PF00583 Acetyltransferase (GNAT) family 51 142 8.6E-7 T 12-10-2018 IPR000182 GNAT domain BEN31_06800 65b39f6f5321ccfe8a5688d68fcfc484 189 SUPERFAMILY SSF55729 6 152 7.21E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 301 1.3E-118 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 SUPERFAMILY SSF75138 3 131 5.23E-39 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 Gene3D G3DSA:3.40.1390.20 1 131 7.5E-43 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 SUPERFAMILY SSF53795 132 297 1.22E-41 T 12-10-2018 BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 Pfam PF02603 HPr Serine kinase N terminus 4 127 9.8E-40 T 12-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 42.062 T 12-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 4.8E-77 T 12-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 BEN31_18525 e6999fa0502bba0e83c4816bbe73eb6b 310 Gene3D G3DSA:3.40.50.300 132 310 1.2E-75 T 12-10-2018 BEN31_13295 7a5e8ad07642812fef1af0dacaf91402 157 SMART SM00731 4 151 7.8E-59 T 12-10-2018 IPR006640 SprT-like BEN31_13295 7a5e8ad07642812fef1af0dacaf91402 157 Pfam PF10263 SprT-like family 7 119 3.3E-14 T 12-10-2018 IPR006640 SprT-like BEN31_13295 7a5e8ad07642812fef1af0dacaf91402 157 Hamap MF_00745 Protein SprT-like. 4 151 40.042 T 12-10-2018 IPR023524 Uncharacterised protein family SprT-like BEN31_13295 7a5e8ad07642812fef1af0dacaf91402 157 Pfam PF17283 SprT-like zinc ribbon domain 118 149 3.2E-7 T 12-10-2018 IPR035240 SprT-like, zinc ribbon domain BEN31_00420 e4a5af7632a6d45701bef563ff7ac183 469 SUPERFAMILY SSF88713 269 455 7.23E-58 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_00420 e4a5af7632a6d45701bef563ff7ac183 469 Gene3D G3DSA:3.20.20.370 239 464 2.0E-64 T 12-10-2018 BEN31_00420 e4a5af7632a6d45701bef563ff7ac183 469 Gene3D G3DSA:3.30.565.40 39 149 2.8E-9 T 12-10-2018 BEN31_00420 e4a5af7632a6d45701bef563ff7ac183 469 Pfam PF01522 Polysaccharide deacetylase 273 385 1.8E-30 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_00420 e4a5af7632a6d45701bef563ff7ac183 469 Gene3D G3DSA:3.90.640.20 153 238 1.2E-13 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 PIRSF PIRSF037677 173 838 2.3E-128 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 PIRSF PIRSF037677 1 220 2.0E-34 T 12-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Gene3D G3DSA:1.10.1420.10 385 521 1.1E-100 T 12-10-2018 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 674 690 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Gene3D G3DSA:3.40.1170.10 1 114 1.1E-47 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 SUPERFAMILY SSF52540 553 784 1.15E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Pfam PF00488 MutS domain V 597 783 9.8E-85 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Gene3D G3DSA:3.30.420.110 121 244 7.7E-14 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Pfam PF01624 MutS domain I 5 113 4.0E-45 T 12-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Gene3D G3DSA:1.10.1420.10 250 545 1.1E-100 T 12-10-2018 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 SMART SM00534 593 780 5.0E-119 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 SUPERFAMILY SSF48334 251 549 1.96E-87 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 SUPERFAMILY SSF53150 111 264 1.1E-29 T 12-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Pfam PF05190 MutS family domain IV 413 504 2.5E-30 T 12-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 850 25.36 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 SMART SM00533 268 576 2.5E-114 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Pfam PF05188 MutS domain II 122 237 3.6E-11 T 12-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 SUPERFAMILY SSF55271 2 109 4.19E-42 T 12-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Pfam PF05192 MutS domain III 256 545 4.3E-44 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 Gene3D G3DSA:3.40.50.300 554 857 1.7E-103 T 12-10-2018 BEN31_07750 ad64ab5947862b5227afabef81ba5969 858 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 856 0.0 T 12-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 BEN31_16805 cb94adfb0adf051db2114253309a2466 373 SMART SM00382 27 224 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16805 cb94adfb0adf051db2114253309a2466 373 SUPERFAMILY SSF54909 267 363 1.49E-22 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_16805 cb94adfb0adf051db2114253309a2466 373 Gene3D G3DSA:3.40.50.300 1 250 5.4E-60 T 12-10-2018 BEN31_16805 cb94adfb0adf051db2114253309a2466 373 SUPERFAMILY SSF52540 4 229 2.09E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16805 cb94adfb0adf051db2114253309a2466 373 Pfam PF03992 Antibiotic biosynthesis monooxygenase 267 343 4.3E-15 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BEN31_16805 cb94adfb0adf051db2114253309a2466 373 Gene3D G3DSA:3.30.70.100 263 372 1.3E-32 T 12-10-2018 BEN31_16805 cb94adfb0adf051db2114253309a2466 373 Pfam PF00005 ABC transporter 18 166 5.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_18070 18f2c0cc7cd871118ebd956bf5ccdd32 876 Pfam PF08239 Bacterial SH3 domain 632 675 1.2E-7 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_18070 18f2c0cc7cd871118ebd956bf5ccdd32 876 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 731 859 1.2E-10 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN31_18070 18f2c0cc7cd871118ebd956bf5ccdd32 876 Gene3D G3DSA:1.10.530.10 727 863 2.9E-7 T 12-10-2018 BEN31_18070 18f2c0cc7cd871118ebd956bf5ccdd32 876 SMART SM00287 624 695 8.1E-8 T 12-10-2018 IPR003646 SH3-like domain, bacterial-type BEN31_18070 18f2c0cc7cd871118ebd956bf5ccdd32 876 SMART SM00047 718 870 6.6E-54 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN31_18070 18f2c0cc7cd871118ebd956bf5ccdd32 876 Gene3D G3DSA:2.30.30.40 624 688 8.0E-11 T 12-10-2018 BEN31_16685 8074e590401178058248c3a7eb2efc25 141 ProDom PD085159 YWQH COILED COIL 1 138 2.0E-19 T 12-10-2018 IPR020326 Uncharacterised protein family YwqH BEN31_16685 8074e590401178058248c3a7eb2efc25 141 Pfam PF16888 Domain of unknown function (DUF5082) 15 106 1.9E-9 T 12-10-2018 IPR031681 Protein of unknown function DUF5082 BEN31_17395 b07232a850972e999388dcd15256ff1f 140 Gene3D G3DSA:2.40.128.20 1 139 2.0E-39 T 12-10-2018 IPR012674 Calycin BEN31_17395 b07232a850972e999388dcd15256ff1f 140 Pfam PF09148 Domain of unknown function (DUF1934) 8 132 6.2E-29 T 12-10-2018 IPR015231 Protein of unknown function DUF1934 BEN31_17395 b07232a850972e999388dcd15256ff1f 140 SUPERFAMILY SSF50814 5 136 4.42E-32 T 12-10-2018 IPR012674 Calycin BEN31_09600 1a26d0b6377cfdc1025642079b5af10c 109 Gene3D G3DSA:1.10.1660.10 6 88 1.1E-22 T 12-10-2018 BEN31_09600 1a26d0b6377cfdc1025642079b5af10c 109 SUPERFAMILY SSF46955 15 102 1.6E-17 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_09600 1a26d0b6377cfdc1025642079b5af10c 109 SMART SM00422 14 82 7.1E-23 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_09600 1a26d0b6377cfdc1025642079b5af10c 109 Pfam PF13411 MerR HTH family regulatory protein 15 76 1.1E-14 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_09600 1a26d0b6377cfdc1025642079b5af10c 109 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 1.5E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_09600 1a26d0b6377cfdc1025642079b5af10c 109 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 1.5E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_09600 1a26d0b6377cfdc1025642079b5af10c 109 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 1.5E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_01365 3f70fb6cce466f6c8390573f3552d67d 273 SUPERFAMILY SSF53850 31 271 3.84E-75 T 12-10-2018 BEN31_01365 3f70fb6cce466f6c8390573f3552d67d 273 Gene3D G3DSA:3.40.190.10 114 221 1.5E-95 T 12-10-2018 BEN31_01365 3f70fb6cce466f6c8390573f3552d67d 273 PIRSF PIRSF002854 1 272 4.3E-91 T 12-10-2018 IPR004872 Lipoprotein NlpA family BEN31_01365 3f70fb6cce466f6c8390573f3552d67d 273 Gene3D G3DSA:3.40.190.10 34 270 1.5E-95 T 12-10-2018 BEN31_01365 3f70fb6cce466f6c8390573f3552d67d 273 Pfam PF03180 NLPA lipoprotein 32 271 2.4E-84 T 12-10-2018 IPR004872 Lipoprotein NlpA family BEN31_06395 a283da00bd1b538c5f9d32cc5e44567f 65 ProDom PD054146 YPMT TRANSMEMBRANE MEMBRANE 1 62 9.0E-8 T 12-10-2018 IPR035403 Uncharacterized protein YmpT BEN31_06395 a283da00bd1b538c5f9d32cc5e44567f 65 Pfam PF17431 Uncharacterized ympT 1 61 5.1E-25 T 12-10-2018 IPR035403 Uncharacterized protein YmpT BEN31_12325 9b0a9bb17a4e1a5e6b89f2c81e11f249 399 Pfam PF05977 Transmembrane secretion effector 27 397 1.3E-14 T 12-10-2018 IPR010290 Transmembrane secretion effector BEN31_12325 9b0a9bb17a4e1a5e6b89f2c81e11f249 399 SUPERFAMILY SSF103473 18 397 2.18E-35 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_12325 9b0a9bb17a4e1a5e6b89f2c81e11f249 399 Gene3D G3DSA:1.20.1250.20 6 395 1.3E-31 T 12-10-2018 BEN31_17670 0bb2d9d09e576ba6e7731355b1dcd2db 231 SMART SM00327 36 223 8.3E-21 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_17670 0bb2d9d09e576ba6e7731355b1dcd2db 231 Gene3D G3DSA:3.40.50.410 37 226 2.5E-28 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_17670 0bb2d9d09e576ba6e7731355b1dcd2db 231 SUPERFAMILY SSF53300 28 222 3.12E-25 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_17670 0bb2d9d09e576ba6e7731355b1dcd2db 231 Pfam PF00092 von Willebrand factor type A domain 39 221 8.8E-17 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_13540 e378d53795cab5ac2bd63c9f565f3952 360 Pfam PF01270 Glycosyl hydrolases family 8 43 223 6.1E-8 T 12-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BEN31_13540 e378d53795cab5ac2bd63c9f565f3952 360 SUPERFAMILY SSF48208 10 333 1.36E-39 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN31_13540 e378d53795cab5ac2bd63c9f565f3952 360 Gene3D G3DSA:1.50.10.10 26 354 4.9E-104 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Gene3D G3DSA:3.20.20.70 493 1185 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Pfam PF04898 Glutamate synthase central domain 467 744 1.2E-113 T 12-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 SUPERFAMILY SSF69336 1217 1483 6.93E-91 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 SUPERFAMILY SSF56235 22 443 5.55E-150 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Pfam PF01645 Conserved region in glutamate synthase 802 1169 1.5E-161 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Pfam PF00310 Glutamine amidotransferases class-II 22 440 1.1E-183 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Gene3D G3DSA:3.60.20.10 22 555 0.0 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 SUPERFAMILY SSF51395 462 1207 1.1E-256 T 12-10-2018 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Pfam PF01493 GXGXG motif 1248 1436 3.5E-80 T 12-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Gene3D G3DSA:2.160.20.60 1219 1493 1.2E-107 T 12-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 BEN31_06825 bb36b29e688b07b3ed1c5b014415cfff 1523 Gene3D G3DSA:3.20.20.70 445 801 0.0 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_13630 e5ebdb6dfd75e0f1958610b099a80c07 337 Gene3D G3DSA:2.40.100.10 196 335 1.8E-48 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN31_13630 e5ebdb6dfd75e0f1958610b099a80c07 337 SUPERFAMILY SSF50891 198 313 3.79E-9 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN31_13630 e5ebdb6dfd75e0f1958610b099a80c07 337 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 306 2.6E-92 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BEN31_13630 e5ebdb6dfd75e0f1958610b099a80c07 337 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 331 3.0E-93 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BEN31_13630 e5ebdb6dfd75e0f1958610b099a80c07 337 SMART SM00797 24 323 1.4E-134 T 12-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B BEN31_15690 766c73add04ea29c6f003e5a0f38f400 294 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 9 294 4.5E-160 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15690 766c73add04ea29c6f003e5a0f38f400 294 SUPERFAMILY SSF51366 18 269 8.47E-69 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_15690 766c73add04ea29c6f003e5a0f38f400 294 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 4 294 53.831 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15690 766c73add04ea29c6f003e5a0f38f400 294 ProSitePatterns PS01235 PdxS/SNZ family signature. 205 223 - T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15690 766c73add04ea29c6f003e5a0f38f400 294 PIRSF PIRSF029271 1 294 4.4E-154 T 12-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15690 766c73add04ea29c6f003e5a0f38f400 294 Gene3D G3DSA:3.20.20.70 2 294 3.1E-149 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_15690 766c73add04ea29c6f003e5a0f38f400 294 Pfam PF01680 SOR/SNZ family 7 212 3.3E-107 T 12-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 7 76 2.2E-32 T 12-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 Gene3D G3DSA:3.30.110.10 79 171 2.3E-37 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 ProSitePatterns PS00938 Initiation factor 3 signature. 58 71 - T 12-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 SUPERFAMILY SSF54364 5 78 1.83E-29 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 170 31.124 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 7 169 3.1E-77 T 12-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 83 168 3.2E-38 T 12-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 SUPERFAMILY SSF55200 82 170 7.46E-33 T 12-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 BEN31_03365 244fc824279bd368cd20da1da1fa46c1 171 Gene3D G3DSA:3.10.20.80 1 78 1.9E-34 T 12-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 SUPERFAMILY SSF69864 171 398 7.85E-96 T 12-10-2018 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 Pfam PF00764 Arginosuccinate synthase 8 392 3.4E-184 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 Gene3D G3DSA:3.40.50.620 1 174 5.8E-69 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 12-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 397 55.78 T 12-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 394 8.8E-180 T 12-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 SUPERFAMILY SSF52402 3 171 1.17E-49 T 12-10-2018 BEN31_03150 c985dbf7b3bdfec320d5c43c7277c1c7 403 Gene3D G3DSA:3.90.1260.10 175 402 7.1E-95 T 12-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 Pfam PF07687 Peptidase dimerisation domain 201 313 1.3E-14 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 19 408 2.0E-112 T 12-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 Gene3D G3DSA:3.30.70.360 203 329 5.2E-141 T 12-10-2018 BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 Pfam PF01546 Peptidase family M20/M25/M40 96 413 9.9E-40 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 SUPERFAMILY SSF55031 202 309 8.37E-13 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 Gene3D G3DSA:3.40.630.10 26 417 5.2E-141 T 12-10-2018 BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 95 104 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BEN31_12575 5ddfe464ba0edd8b8b20914b702e4b3e 421 SUPERFAMILY SSF53187 6 418 1.83E-67 T 12-10-2018 BEN31_05965 e76f4b0c33fd45ada9083ffb7a12f48d 267 SUPERFAMILY SSF51366 6 238 2.35E-79 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_05965 e76f4b0c33fd45ada9083ffb7a12f48d 267 Pfam PF00290 Tryptophan synthase alpha chain 7 253 6.7E-94 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_05965 e76f4b0c33fd45ada9083ffb7a12f48d 267 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 7 260 1.6E-95 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_05965 e76f4b0c33fd45ada9083ffb7a12f48d 267 Gene3D G3DSA:3.20.20.70 2 262 6.8E-93 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_05965 e76f4b0c33fd45ada9083ffb7a12f48d 267 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 8 263 35.005 T 12-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_05965 e76f4b0c33fd45ada9083ffb7a12f48d 267 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 42 55 - T 12-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 BEN31_01325 adb51ead88b8a2399bf7e21c3e973859 118 SUPERFAMILY SSF52833 5 117 2.05E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_01325 adb51ead88b8a2399bf7e21c3e973859 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 1.6E-34 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BEN31_01325 adb51ead88b8a2399bf7e21c3e973859 118 Pfam PF03960 ArsC family 10 114 3.6E-18 T 12-10-2018 IPR006660 Arsenate reductase-like BEN31_01325 adb51ead88b8a2399bf7e21c3e973859 118 Gene3D G3DSA:3.40.30.10 1 116 8.4E-47 T 12-10-2018 BEN31_09630 6d9873ea6ca1ae06e00b406204b71e9c 172 Pfam PF03413 Peptidase propeptide and YPEB domain 44 99 3.7E-11 T 12-10-2018 IPR025711 PepSY domain BEN31_09630 6d9873ea6ca1ae06e00b406204b71e9c 172 Pfam PF03413 Peptidase propeptide and YPEB domain 110 169 5.6E-17 T 12-10-2018 IPR025711 PepSY domain BEN31_09630 6d9873ea6ca1ae06e00b406204b71e9c 172 Gene3D G3DSA:3.10.450.40 103 172 1.8E-20 T 12-10-2018 BEN31_09630 6d9873ea6ca1ae06e00b406204b71e9c 172 Gene3D G3DSA:3.10.450.40 34 102 4.8E-17 T 12-10-2018 BEN31_14855 1533309a63e11e9e6320100dc12e222e 157 SUPERFAMILY SSF55729 6 151 4.65E-29 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_14855 1533309a63e11e9e6320100dc12e222e 157 Pfam PF00583 Acetyltransferase (GNAT) family 43 143 3.5E-20 T 12-10-2018 IPR000182 GNAT domain BEN31_14855 1533309a63e11e9e6320100dc12e222e 157 Gene3D G3DSA:3.40.630.30 3 154 1.8E-40 T 12-10-2018 BEN31_12155 6b2c9e7ba1c279a60b169c79f94b83a5 543 Gene3D G3DSA:3.40.630.10 53 350 3.7E-32 T 12-10-2018 BEN31_12155 6b2c9e7ba1c279a60b169c79f94b83a5 543 Pfam PF00246 Zinc carboxypeptidase 75 191 4.2E-18 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BEN31_12155 6b2c9e7ba1c279a60b169c79f94b83a5 543 SMART SM00631 68 325 5.1E-5 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BEN31_12155 6b2c9e7ba1c279a60b169c79f94b83a5 543 SUPERFAMILY SSF53187 68 345 4.96E-36 T 12-10-2018 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 Gene3D G3DSA:1.10.8.60 319 387 8.8E-25 T 12-10-2018 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 361 370 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 SMART SM00382 169 322 1.8E-7 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 SUPERFAMILY SSF55785 9 112 1.26E-13 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 Gene3D G3DSA:3.30.450.20 4 118 6.7E-14 T 12-10-2018 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 Pfam PF02954 Bacterial regulatory protein, Fis family 414 453 3.1E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 Gene3D G3DSA:3.40.50.300 135 318 3.2E-53 T 12-10-2018 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 Pfam PF00989 PAS fold 11 118 1.9E-8 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 SMART SM00091 9 75 0.0042 T 12-10-2018 IPR000014 PAS domain BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 436 6.1E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 436 456 6.1E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 Gene3D G3DSA:1.10.10.60 389 455 3.9E-16 T 12-10-2018 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 SUPERFAMILY SSF46689 361 453 6.45E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 Pfam PF00158 Sigma-54 interaction domain 151 312 1.3E-57 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 124 1.3E-11 T 12-10-2018 IPR000014 PAS domain BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 173 186 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN31_06455 16c7b36a9cd4fd10a69e21843dc95164 458 SUPERFAMILY SSF52540 152 382 6.12E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11420 2ff0de9449f0c0a67ddf2b1429aed921 248 SMART SM00382 27 205 5.1E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_11420 2ff0de9449f0c0a67ddf2b1429aed921 248 Pfam PF00005 ABC transporter 19 156 2.4E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11420 2ff0de9449f0c0a67ddf2b1429aed921 248 SUPERFAMILY SSF52540 2 219 7.43E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11420 2ff0de9449f0c0a67ddf2b1429aed921 248 Gene3D G3DSA:3.40.50.300 1 237 1.2E-51 T 12-10-2018 BEN31_05420 055f315cd3a3bcbf18af1e513c1bf2b6 319 PIRSF PIRSF000545 2 319 4.7E-135 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN31_05420 055f315cd3a3bcbf18af1e513c1bf2b6 319 Hamap MF_00215 Pantothenate kinase [coaA]. 1 319 150.999 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN31_05420 055f315cd3a3bcbf18af1e513c1bf2b6 319 SUPERFAMILY SSF52540 11 317 7.3E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05420 055f315cd3a3bcbf18af1e513c1bf2b6 319 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 12 318 5.4E-145 T 12-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN31_05420 055f315cd3a3bcbf18af1e513c1bf2b6 319 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 234 5.0E-13 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BEN31_05420 055f315cd3a3bcbf18af1e513c1bf2b6 319 Gene3D G3DSA:3.40.50.300 3 319 7.4E-94 T 12-10-2018 BEN31_04280 f4d0543269bcb45547fbf9b6bbc30b38 288 SUPERFAMILY SSF53474 28 286 1.45E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_04280 f4d0543269bcb45547fbf9b6bbc30b38 288 Pfam PF07859 alpha/beta hydrolase fold 68 161 3.4E-20 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BEN31_04280 f4d0543269bcb45547fbf9b6bbc30b38 288 Gene3D G3DSA:3.40.50.1820 27 270 2.2E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 185 204 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 SUPERFAMILY SSF53383 1 357 1.38E-109 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 PIRSF PIRSF000525 1 359 1.1E-145 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 Gene3D G3DSA:3.40.640.10 17 254 7.9E-83 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 357 4.4E-152 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 358 46.956 T 12-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 Pfam PF00266 Aminotransferase class-V 6 347 7.0E-46 T 12-10-2018 IPR000192 Aminotransferase class V domain BEN31_10930 5f7667a7ae60926246f35a225ab9e298 359 Gene3D G3DSA:3.90.1150.10 256 358 7.9E-40 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 Pfam PF01676 Metalloenzyme superfamily 7 379 3.4E-46 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 PIRSF PIRSF001491 5 394 2.0E-168 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 Gene3D G3DSA:3.30.70.1250 101 219 1.2E-175 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 SUPERFAMILY SSF143856 103 219 4.05E-52 T 12-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 SUPERFAMILY SSF53649 5 393 8.11E-78 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 Hamap MF_00740 Phosphopentomutase [deoB]. 6 390 56.047 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 TIGRFAM TIGR01696 deoB: phosphopentomutase 8 388 1.3E-209 T 12-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 BEN31_05540 d5fbc4b0c7156ec55f40f6567ca793ad 394 Gene3D G3DSA:3.40.720.10 7 390 1.2E-175 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 Gene3D G3DSA:3.40.50.1220 201 366 1.4E-62 T 12-10-2018 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 572 1.3E-278 T 12-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 SUPERFAMILY SSF52518 377 572 4.05E-67 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 400 548 2.6E-53 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 179 1.1E-54 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 Gene3D G3DSA:3.40.50.970 10 190 1.9E-69 T 12-10-2018 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 SUPERFAMILY SSF52518 15 197 2.26E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 207 342 4.7E-47 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 Gene3D G3DSA:3.40.50.970 370 573 2.1E-70 T 12-10-2018 BEN31_03635 c977af47c4d8b7fc6cdfa4f0b50eac10 574 SUPERFAMILY SSF52467 199 368 3.4E-64 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 Gene3D G3DSA:3.30.420.40 1 254 2.3E-114 T 12-10-2018 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 59.654 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 495 3.2E-227 T 12-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 PIRSF PIRSF000538 4 498 7.1E-183 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 SUPERFAMILY SSF53067 5 256 5.67E-99 T 12-10-2018 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 7.4E-91 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 SUPERFAMILY SSF53067 256 495 7.99E-85 T 12-10-2018 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 3.3E-65 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_11235 9d5555008fc761e242d9efe720fd54b3 498 Gene3D G3DSA:3.30.420.40 255 498 4.9E-91 T 12-10-2018 BEN31_04480 fe93eace635c1e67163590314e455676 187 Gene3D G3DSA:1.10.3210.10 1 186 1.5E-60 T 12-10-2018 BEN31_04480 fe93eace635c1e67163590314e455676 187 SUPERFAMILY SSF109604 3 185 6.02E-37 T 12-10-2018 BEN31_04480 fe93eace635c1e67163590314e455676 187 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 180 2.8E-69 T 12-10-2018 IPR005249 Conserved hypothetical protein CHP00488 BEN31_04480 fe93eace635c1e67163590314e455676 187 Pfam PF01966 HD domain 18 130 3.2E-16 T 12-10-2018 IPR006674 HD domain BEN31_04480 fe93eace635c1e67163590314e455676 187 SMART SM00471 14 141 2.0E-11 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_03330 214409a808025654544ce2a2b8f09626 646 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 646 35.53 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 642 3.1E-242 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 329 540 6.7E-35 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Gene3D G3DSA:3.30.930.10 230 543 1.8E-117 T 12-10-2018 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Gene3D G3DSA:3.10.20.30 2 66 2.2E-24 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BEN31_03330 214409a808025654544ce2a2b8f09626 646 Pfam PF02824 TGS domain 7 64 8.3E-12 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 SUPERFAMILY SSF55681 248 537 2.49E-97 T 12-10-2018 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Gene3D G3DSA:3.40.50.800 544 646 1.7E-33 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BEN31_03330 214409a808025654544ce2a2b8f09626 646 SUPERFAMILY SSF52954 540 643 1.24E-29 T 12-10-2018 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Pfam PF03129 Anticodon binding domain 552 638 7.5E-24 T 12-10-2018 IPR004154 Anticodon-binding BEN31_03330 214409a808025654544ce2a2b8f09626 646 SMART SM00863 175 224 9.4E-25 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 175 224 2.8E-16 T 12-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 BEN31_03330 214409a808025654544ce2a2b8f09626 646 SUPERFAMILY SSF55186 67 246 1.57E-64 T 12-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 BEN31_03330 214409a808025654544ce2a2b8f09626 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 518 531 1.8E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 336 364 1.8E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 545 557 1.8E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 369 392 1.8E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 475 503 1.8E-47 T 12-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 SUPERFAMILY SSF81271 5 64 6.76E-15 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Gene3D G3DSA:3.30.980.10 72 227 2.8E-63 T 12-10-2018 BEN31_03330 214409a808025654544ce2a2b8f09626 646 Gene3D G3DSA:3.30.54.20 136 192 2.8E-63 T 12-10-2018 BEN31_10610 5d48887fc507f9fc661a3e1e3fde8327 613 PIRSF PIRSF001589 1 611 6.4E-149 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN31_10610 5d48887fc507f9fc661a3e1e3fde8327 613 Pfam PF00733 Asparagine synthase 242 604 4.5E-96 T 12-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 BEN31_10610 5d48887fc507f9fc661a3e1e3fde8327 613 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 532 1.1E-172 T 12-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 BEN31_10610 5d48887fc507f9fc661a3e1e3fde8327 613 SUPERFAMILY SSF56235 1 226 5.32E-64 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_10610 5d48887fc507f9fc661a3e1e3fde8327 613 Gene3D G3DSA:3.60.20.10 2 184 2.8E-62 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_10610 5d48887fc507f9fc661a3e1e3fde8327 613 SUPERFAMILY SSF52402 230 575 5.12E-75 T 12-10-2018 BEN31_10610 5d48887fc507f9fc661a3e1e3fde8327 613 Pfam PF13537 Glutamine amidotransferase domain 48 169 5.8E-46 T 12-10-2018 IPR017932 Glutamine amidotransferase type 2 domain BEN31_10350 6c738132ea4f970132a68ba3ec9b90d2 544 Gene3D G3DSA:3.90.76.10 77 196 1.1E-185 T 12-10-2018 BEN31_10350 6c738132ea4f970132a68ba3ec9b90d2 544 Gene3D G3DSA:3.40.190.10 55 526 1.1E-185 T 12-10-2018 BEN31_10350 6c738132ea4f970132a68ba3ec9b90d2 544 PIRSF PIRSF002741 6 544 1.3E-159 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BEN31_10350 6c738132ea4f970132a68ba3ec9b90d2 544 Gene3D G3DSA:3.10.105.10 289 512 1.1E-185 T 12-10-2018 BEN31_10350 6c738132ea4f970132a68ba3ec9b90d2 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 457 1.7E-93 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BEN31_10350 6c738132ea4f970132a68ba3ec9b90d2 544 SUPERFAMILY SSF53850 42 542 1.54E-139 T 12-10-2018 BEN31_10835 97432cf614bc4612ddcaf472a24b2683 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 501 2.8E-21 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_10835 97432cf614bc4612ddcaf472a24b2683 517 SUPERFAMILY SSF56801 5 514 1.57E-160 T 12-10-2018 BEN31_10835 97432cf614bc4612ddcaf472a24b2683 517 Pfam PF00501 AMP-binding enzyme 8 417 2.7E-114 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_10835 97432cf614bc4612ddcaf472a24b2683 517 Gene3D G3DSA:3.40.50.12780 1 410 6.5E-126 T 12-10-2018 BEN31_10835 97432cf614bc4612ddcaf472a24b2683 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_10835 97432cf614bc4612ddcaf472a24b2683 517 Gene3D G3DSA:3.30.300.310 413 516 5.2E-33 T 12-10-2018 BEN31_12565 6d0a114e84bd3b4c2bc9433ca7d1d27a 580 Pfam PF13382 Adenine deaminase C-terminal domain 416 571 1.1E-34 T 12-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 BEN31_12565 6d0a114e84bd3b4c2bc9433ca7d1d27a 580 SUPERFAMILY SSF51338 20 356 9.47E-16 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_12565 6d0a114e84bd3b4c2bc9433ca7d1d27a 580 SUPERFAMILY SSF51556 82 328 2.19E-8 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_12565 6d0a114e84bd3b4c2bc9433ca7d1d27a 580 Gene3D G3DSA:2.30.40.10 26 360 3.6E-79 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_12565 6d0a114e84bd3b4c2bc9433ca7d1d27a 580 Pfam PF01979 Amidohydrolase family 78 360 1.3E-20 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN31_12565 6d0a114e84bd3b4c2bc9433ca7d1d27a 580 Gene3D G3DSA:3.20.20.140 82 325 3.6E-79 T 12-10-2018 BEN31_09695 14ba0cb173734438bce1432036539eac 365 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 258 36.286 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 12-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 PIRSF PIRSF000729 1 363 6.6E-135 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BEN31_09695 14ba0cb173734438bce1432036539eac 365 Pfam PF00696 Amino acid kinase family 4 232 1.2E-44 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 SUPERFAMILY SSF88697 277 360 2.65E-17 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_09695 14ba0cb173734438bce1432036539eac 365 SUPERFAMILY SSF53633 4 254 8.77E-68 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_09695 14ba0cb173734438bce1432036539eac 365 Gene3D G3DSA:3.40.1160.10 1 261 9.6E-84 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_09695 14ba0cb173734438bce1432036539eac 365 Gene3D G3DSA:2.30.130.10 266 361 8.9E-24 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 BEN31_09695 14ba0cb173734438bce1432036539eac 365 SMART SM00359 277 355 1.3E-17 T 12-10-2018 IPR002478 PUA domain GO:0003723 BEN31_09695 14ba0cb173734438bce1432036539eac 365 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 1.1E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 1.1E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 1.1E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 1.1E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 1.1E-53 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_09695 14ba0cb173734438bce1432036539eac 365 Pfam PF01472 PUA domain 277 346 8.0E-19 T 12-10-2018 IPR002478 PUA domain GO:0003723 BEN31_09695 14ba0cb173734438bce1432036539eac 365 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 360 3.5E-140 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_12495 0f74196ce81b02e5ffc18541c428797e 285 Gene3D G3DSA:1.10.1040.10 189 285 2.9E-29 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_12495 0f74196ce81b02e5ffc18541c428797e 285 Gene3D G3DSA:3.40.50.720 3 188 9.8E-58 T 12-10-2018 BEN31_12495 0f74196ce81b02e5ffc18541c428797e 285 SUPERFAMILY SSF48179 186 284 2.04E-30 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_12495 0f74196ce81b02e5ffc18541c428797e 285 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 184 1.1E-54 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_12495 0f74196ce81b02e5ffc18541c428797e 285 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 2.6E-31 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_12495 0f74196ce81b02e5ffc18541c428797e 285 PIRSF PIRSF000105 1 285 2.2E-81 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 BEN31_12495 0f74196ce81b02e5ffc18541c428797e 285 SUPERFAMILY SSF51735 1 186 1.17E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 PIRSF PIRSF005419 1 677 5.1E-262 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 1.4E-282 T 12-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 12-10-2018 IPR025505 FHIPEP conserved site BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 Pfam PF00771 FHIPEP family 15 667 3.3E-276 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 Gene3D G3DSA:1.10.8.540 486 575 4.1E-33 T 12-10-2018 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 Gene3D G3DSA:1.10.490.80 577 675 8.7E-30 T 12-10-2018 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 Gene3D G3DSA:3.40.30.60 342 485 8.3E-54 T 12-10-2018 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 2.1E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 2.1E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 2.1E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 2.1E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 2.1E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08105 3dec3bedd00c155bc682c6f0220ea9b9 677 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 2.1E-54 T 12-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 111 130 7.0E-5 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 188 196 7.0E-5 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 PRINTS PR00409 Phthalate dioxygenase reductase family signature 52 66 7.0E-5 T 12-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 Gene3D G3DSA:3.40.50.80 102 214 7.3E-24 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 Gene3D G3DSA:2.40.30.10 2 97 3.2E-28 T 12-10-2018 BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 SUPERFAMILY SSF52343 94 255 1.7E-29 T 12-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 215 254 2.0E-16 T 12-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 Gene3D G3DSA:2.10.240.10 215 256 2.7E-19 T 12-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 PIRSF PIRSF006816 1 257 4.4E-70 T 12-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 SUPERFAMILY SSF63380 3 99 5.55E-21 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN31_08535 6b6cc002010e9c2e118d8c778f568f5b 258 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 3 256 38.072 T 12-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit BEN31_08700 1411e21231bae9c17bc182f46d0fe716 229 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 221 2.5E-31 T 12-10-2018 IPR010273 Protein of unknown function DUF881 BEN31_08700 1411e21231bae9c17bc182f46d0fe716 229 Gene3D G3DSA:3.30.70.1880 90 226 2.7E-30 T 12-10-2018 BEN31_18255 4f281a5c7baacd6ae80a328148d5fe1d 280 Gene3D G3DSA:3.30.1180.10 152 280 4.9E-46 T 12-10-2018 BEN31_18255 4f281a5c7baacd6ae80a328148d5fe1d 280 SUPERFAMILY SSF82549 1 279 1.33E-97 T 12-10-2018 BEN31_18255 4f281a5c7baacd6ae80a328148d5fe1d 280 Gene3D G3DSA:3.40.50.10170 1 151 5.8E-57 T 12-10-2018 BEN31_18255 4f281a5c7baacd6ae80a328148d5fe1d 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 277 7.7E-105 T 12-10-2018 IPR003797 DegV BEN31_18255 4f281a5c7baacd6ae80a328148d5fe1d 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 278 1.3E-101 T 12-10-2018 IPR003797 DegV BEN31_03055 5dff554135dbb7b1b047d46ae302b8f9 253 SMART SM00382 32 220 1.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_03055 5dff554135dbb7b1b047d46ae302b8f9 253 Pfam PF00005 ABC transporter 23 171 2.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_03055 5dff554135dbb7b1b047d46ae302b8f9 253 SUPERFAMILY SSF52540 3 225 8.83E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03055 5dff554135dbb7b1b047d46ae302b8f9 253 Gene3D G3DSA:3.40.50.300 1 244 2.6E-65 T 12-10-2018 BEN31_11770 333c85caf675b862366253d1654b4bce 195 PIRSF PIRSF000232 8 195 2.2E-47 T 12-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like BEN31_11770 333c85caf675b862366253d1654b4bce 195 Pfam PF00881 Nitroreductase family 18 174 1.3E-24 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN31_11770 333c85caf675b862366253d1654b4bce 195 Gene3D G3DSA:3.40.109.10 6 194 2.0E-41 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_11770 333c85caf675b862366253d1654b4bce 195 SUPERFAMILY SSF55469 13 192 6.54E-36 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_11745 649d728b5c611f2801287655271a642b 104 SUPERFAMILY SSF101697 1 103 1.06E-43 T 12-10-2018 IPR036289 Hypothetical protein YfhH BEN31_11745 649d728b5c611f2801287655271a642b 104 Pfam PF08838 Protein of unknown function (DUF1811) 3 100 3.0E-43 T 12-10-2018 IPR014938 Protein of unknown function DUF1811 BEN31_11745 649d728b5c611f2801287655271a642b 104 Gene3D G3DSA:2.30.30.340 51 104 1.0E-21 T 12-10-2018 BEN31_11745 649d728b5c611f2801287655271a642b 104 Gene3D G3DSA:1.10.287.880 1 50 1.5E-26 T 12-10-2018 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 Pfam PF10415 Fumarase C C-terminus 407 459 9.6E-26 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 1.9E-5 T 12-10-2018 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 1.9E-5 T 12-10-2018 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 Gene3D G3DSA:1.10.275.10 5 137 1.3E-54 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 Pfam PF00206 Lyase 12 341 2.3E-117 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 459 1.7E-249 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 Gene3D G3DSA:1.10.40.30 407 464 6.2E-28 T 12-10-2018 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.1E-33 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 3.1E-33 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 3.1E-33 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 3.1E-33 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 SUPERFAMILY SSF48557 4 459 9.74E-155 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 461 89.328 T 12-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_01255 fe8e67ae308029c49c44963c342a550d 464 Gene3D G3DSA:1.20.200.10 138 406 2.0E-114 T 12-10-2018 BEN31_08240 cd640178b85b4004b67b8db89a3f6c8f 434 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 336 359 - T 12-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 BEN31_08240 cd640178b85b4004b67b8db89a3f6c8f 434 SUPERFAMILY SSF51905 7 366 8.43E-28 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_08240 cd640178b85b4004b67b8db89a3f6c8f 434 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 5 433 37.25 T 12-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 BEN31_08240 cd640178b85b4004b67b8db89a3f6c8f 434 Pfam PF01134 Glucose inhibited division protein A 5 367 3.6E-119 T 12-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 BEN31_08240 cd640178b85b4004b67b8db89a3f6c8f 434 Gene3D G3DSA:3.50.50.60 2 177 8.6E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_08240 cd640178b85b4004b67b8db89a3f6c8f 434 Gene3D G3DSA:3.50.50.60 291 434 6.9E-53 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_08240 cd640178b85b4004b67b8db89a3f6c8f 434 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 433 1.7E-244 T 12-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 PIRSF PIRSF035805 5 197 2.2E-65 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 38.108 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 SUPERFAMILY SSF52540 8 142 2.04E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 Gene3D G3DSA:3.30.60.20 142 193 7.2E-27 T 12-10-2018 BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 Gene3D G3DSA:3.40.50.300 1 141 1.7E-58 T 12-10-2018 BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 Pfam PF00265 Thymidine kinase 8 187 1.2E-57 T 12-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 12-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 BEN31_17520 d0dc72f0a68afe61e26e51e9d74d5d0a 200 SUPERFAMILY SSF57716 142 193 9.27E-17 T 12-10-2018 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 Gene3D G3DSA:1.20.5.100 197 228 1.2E-18 T 12-10-2018 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 PIRSF PIRSF000124 1 431 5.8E-140 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 SMART SM00984 314 416 2.4E-40 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 SUPERFAMILY SSF48179 198 292 2.83E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 Gene3D G3DSA:3.40.50.720 229 436 2.4E-72 T 12-10-2018 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 SUPERFAMILY SSF52413 303 426 2.22E-33 T 12-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 413 2.1E-29 T 12-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 5.4E-60 T 12-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 SUPERFAMILY SSF51735 1 189 1.97E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 412 1.2E-134 T 12-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 4.0E-39 T 12-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 PIRSF PIRSF500134 1 434 1.8E-168 T 12-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 BEN31_17865 8fc5cbcedced0cf6906213fbba3973b7 439 Gene3D G3DSA:3.40.50.720 1 196 3.1E-68 T 12-10-2018 BEN31_13985 7b55ed458e422700cdf758274fdc2cdb 225 SUPERFAMILY SSF161098 20 207 2.49E-49 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_13985 7b55ed458e422700cdf758274fdc2cdb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 221 4.4E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_13985 7b55ed458e422700cdf758274fdc2cdb 225 Gene3D G3DSA:1.10.3720.10 13 223 1.7E-58 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_13985 7b55ed458e422700cdf758274fdc2cdb 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 116 1.3E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_07845 8f3e6403597e6a01cd90e6cc76fde978 430 Pfam PF05193 Peptidase M16 inactive domain 184 362 1.9E-17 T 12-10-2018 IPR007863 Peptidase M16, C-terminal BEN31_07845 8f3e6403597e6a01cd90e6cc76fde978 430 Gene3D G3DSA:3.30.830.10 9 239 1.2E-58 T 12-10-2018 BEN31_07845 8f3e6403597e6a01cd90e6cc76fde978 430 Gene3D G3DSA:3.30.830.10 240 427 3.1E-37 T 12-10-2018 BEN31_07845 8f3e6403597e6a01cd90e6cc76fde978 430 SUPERFAMILY SSF63411 280 428 5.24E-17 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN31_07845 8f3e6403597e6a01cd90e6cc76fde978 430 SUPERFAMILY SSF63411 15 221 5.59E-41 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN31_07845 8f3e6403597e6a01cd90e6cc76fde978 430 Pfam PF00675 Insulinase (Peptidase family M16) 66 177 2.2E-18 T 12-10-2018 IPR011765 Peptidase M16, N-terminal BEN31_00945 2bca5391c407591a4074e901418bae4d 269 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 5 176 7.6E-45 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_00945 2bca5391c407591a4074e901418bae4d 269 SMART SM00646 64 176 4.6E-38 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_00945 2bca5391c407591a4074e901418bae4d 269 Gene3D G3DSA:3.40.630.40 1 179 2.1E-53 T 12-10-2018 BEN31_00945 2bca5391c407591a4074e901418bae4d 269 SUPERFAMILY SSF53187 3 180 4.08E-50 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-8 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 1.2E-8 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 Gene3D G3DSA:1.20.58.100 422 539 7.5E-35 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 6.5E-287 T 12-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 BEN31_03510 960114d2083b0fe071630a718eab032d 586 SUPERFAMILY SSF56425 231 353 3.89E-31 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03510 960114d2083b0fe071630a718eab032d 586 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 12-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03510 960114d2083b0fe071630a718eab032d 586 Gene3D G3DSA:3.50.50.60 6 403 3.2E-124 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_03510 960114d2083b0fe071630a718eab032d 586 Gene3D G3DSA:3.90.700.10 258 367 3.2E-124 T 12-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03510 960114d2083b0fe071630a718eab032d 586 PIRSF PIRSF000171 343 576 3.6E-16 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 PIRSF PIRSF000171 1 240 7.8E-21 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-6 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 1.2E-6 T 12-10-2018 BEN31_03510 960114d2083b0fe071630a718eab032d 586 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 2.0E-42 T 12-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03510 960114d2083b0fe071630a718eab032d 586 SUPERFAMILY SSF46977 443 579 1.83E-45 T 12-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03510 960114d2083b0fe071630a718eab032d 586 SUPERFAMILY SSF51905 6 424 2.78E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_03510 960114d2083b0fe071630a718eab032d 586 Pfam PF00890 FAD binding domain 6 392 2.6E-88 T 12-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 177 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 Gene3D G3DSA:3.40.50.720 5 315 9.9E-113 T 12-10-2018 BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 Gene3D G3DSA:3.40.50.720 97 288 9.9E-113 T 12-10-2018 BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 198 220 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 288 9.1E-66 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 SUPERFAMILY SSF52283 2 133 8.29E-33 T 12-10-2018 BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 319 8.7E-27 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BEN31_18655 eb945081bf55849245ab17b2bc7a4e03 325 SUPERFAMILY SSF51735 102 289 7.81E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 SUPERFAMILY SSF48334 18 287 7.59E-29 T 12-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 PIRSF PIRSF005814 1 785 2.0E-287 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 Pfam PF01713 Smr domain 710 785 1.8E-20 T 12-10-2018 IPR002625 Smr domain BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 SMART SM00533 9 315 2.1E-43 T 12-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 SMART SM00534 328 513 2.2E-81 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 Gene3D G3DSA:1.10.1420.10 35 283 1.2E-8 T 12-10-2018 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 SUPERFAMILY SSF160443 708 784 2.22E-9 T 12-10-2018 IPR036063 Smr domain superfamily BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 Gene3D G3DSA:3.40.50.300 292 598 3.9E-87 T 12-10-2018 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 Pfam PF00488 MutS domain V 331 512 3.9E-36 T 12-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 785 0.0 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 Gene3D G3DSA:1.10.1420.10 134 259 1.2E-8 T 12-10-2018 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 SMART SM00463 707 785 2.3E-23 T 12-10-2018 IPR002625 Smr domain BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 784 22.536 T 12-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 SUPERFAMILY SSF52540 292 512 2.64E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03440 84130b402a80b308d23f25e7ee91e2a6 785 Gene3D G3DSA:3.30.1370.110 698 785 2.3E-24 T 12-10-2018 BEN31_09195 9a13129e1f6291fc468737f466de958f 80 Hamap MF_00506 UPF0180 protein . 1 79 25.873 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 BEN31_09195 9a13129e1f6291fc468737f466de958f 80 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 1 47 1.0E-11 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 BEN31_09195 9a13129e1f6291fc468737f466de958f 80 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 78 2.2E-29 T 12-10-2018 IPR005370 Uncharacterised protein family UPF0180 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 380 7.3E-9 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 46 69 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 430 1.2E-127 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 SUPERFAMILY SSF53623 5 301 1.14E-94 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 PIRSF PIRSF001563 1 434 1.6E-150 T 12-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 Pfam PF08245 Mur ligase middle domain 48 275 1.9E-13 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 Gene3D G3DSA:3.40.1190.10 5 302 1.5E-100 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 Gene3D G3DSA:3.90.190.20 303 433 5.6E-30 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_03755 a2567b1fa36f57c1008c56963a9d33f0 434 SUPERFAMILY SSF53244 303 430 4.58E-24 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 Gene3D G3DSA:1.10.10.60 417 471 1.8E-19 T 12-10-2018 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 Gene3D G3DSA:1.10.10.60 367 416 2.0E-15 T 12-10-2018 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 SUPERFAMILY SSF46689 420 469 1.79E-11 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 SMART SM00448 2 116 6.4E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 Pfam PF12833 Helix-turn-helix domain 390 468 1.9E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 SUPERFAMILY SSF52172 1 136 2.13E-35 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 Gene3D G3DSA:3.40.50.12740 2 174 7.6E-38 T 12-10-2018 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 SMART SM00342 383 466 5.1E-31 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 Pfam PF00072 Response regulator receiver domain 4 116 1.7E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_18045 0edd603bb1c3ca9ca2d28f01bdb7a376 472 SUPERFAMILY SSF46689 369 417 1.79E-9 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 Gene3D G3DSA:3.40.50.180 160 351 2.5E-62 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 Pfam PF01339 CheB methylesterase 169 348 2.1E-53 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 SUPERFAMILY SSF52172 1 107 3.27E-29 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 SUPERFAMILY SSF52738 163 353 3.01E-60 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 Gene3D G3DSA:3.40.50.2300 1 137 4.6E-33 T 12-10-2018 BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 PIRSF PIRSF000876 1 357 5.8E-132 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 Pfam PF00072 Response regulator receiver domain 4 109 5.0E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 353 37.847 T 12-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN31_08090 eefbaaae37acb2eeed991f7f40ba7614 357 SMART SM00448 2 118 1.9E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 Gene3D G3DSA:3.40.640.10 58 278 1.7E-129 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 195 218 5.4E-11 T 12-10-2018 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 159 183 5.4E-11 T 12-10-2018 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 113 134 5.4E-11 T 12-10-2018 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 91 111 5.4E-11 T 12-10-2018 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 Pfam PF00155 Aminotransferase class I and II 29 375 3.1E-65 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 Gene3D G3DSA:3.90.1150.10 29 375 1.7E-129 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 SUPERFAMILY SSF53383 4 379 1.61E-113 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_09315 ec868d56ffeafcf458d0154ae5335632 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BEN31_01950 1a6bd5a80fe24c59801c8f2078f17ec9 72 Pfam PF10676 Spore germination protein gerPA/gerPF 5 58 1.8E-7 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 7.0E-24 T 12-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.5E-28 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 SUPERFAMILY SSF48557 4 456 6.13E-152 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 Gene3D G3DSA:1.20.200.10 120 446 5.1E-194 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 456 5.0E-211 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 Gene3D G3DSA:1.10.275.10 26 230 5.1E-194 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 Gene3D G3DSA:1.10.40.30 361 433 5.1E-194 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 6.8E-68 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 6.8E-68 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 6.8E-68 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 6.8E-68 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 6.8E-68 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 6.8E-68 T 12-10-2018 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 44.071 T 12-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 Pfam PF00206 Lyase 7 301 5.7E-74 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BEN31_03155 885d2ade8fcf89c09d4368a358066f7e 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN31_12145 8fe0efc5be10692028c25128c53b6197 185 Pfam PF03551 Transcriptional regulator PadR-like family 8 81 1.7E-18 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BEN31_12145 8fe0efc5be10692028c25128c53b6197 185 SUPERFAMILY SSF46785 4 182 1.17E-39 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_12145 8fe0efc5be10692028c25128c53b6197 185 Gene3D G3DSA:1.10.10.10 3 88 5.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12145 8fe0efc5be10692028c25128c53b6197 185 Pfam PF10400 Virulence activator alpha C-term 94 180 5.9E-18 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal BEN31_17660 188766963b7f9aa4054d5737da674b66 435 Gene3D G3DSA:3.65.10.10 21 231 1.2E-173 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN31_17660 188766963b7f9aa4054d5737da674b66 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 2.8E-121 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BEN31_17660 188766963b7f9aa4054d5737da674b66 435 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.518 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_17660 188766963b7f9aa4054d5737da674b66 435 SUPERFAMILY SSF55205 2 418 1.49E-141 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BEN31_17660 188766963b7f9aa4054d5737da674b66 435 Gene3D G3DSA:3.65.10.10 7 414 1.2E-173 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN31_17660 188766963b7f9aa4054d5737da674b66 435 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 2.2E-180 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_03920 7887dd4353a33d6b83ec88c50667b1d2 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.699 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN31_03920 7887dd4353a33d6b83ec88c50667b1d2 342 Gene3D G3DSA:3.40.1780.10 14 341 5.6E-141 T 12-10-2018 BEN31_03920 7887dd4353a33d6b83ec88c50667b1d2 342 SUPERFAMILY SSF111337 1 341 3.01E-140 T 12-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN31_03920 7887dd4353a33d6b83ec88c50667b1d2 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 5.9E-144 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN31_03920 7887dd4353a33d6b83ec88c50667b1d2 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 7.6E-155 T 12-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 BEN31_03920 7887dd4353a33d6b83ec88c50667b1d2 342 Gene3D G3DSA:2.40.10.240 64 162 5.6E-141 T 12-10-2018 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Gene3D G3DSA:3.40.50.300 1 202 6.3E-76 T 12-10-2018 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 SUPERFAMILY SSF52540 59 347 1.72E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06655 67200f11d229ac9cad0be1063293753b 593 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 457 1.5E-138 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Gene3D G3DSA:3.40.50.300 203 334 1.4E-39 T 12-10-2018 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 SUPERFAMILY SSF46785 397 539 8.03E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Pfam PF00270 DEAD/DEAH box helicase 21 183 2.1E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Pfam PF00570 HRDC domain 518 584 5.9E-24 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Pfam PF16124 RecQ zinc-binding 339 399 2.8E-14 T 12-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Pfam PF00271 Helicase conserved C-terminal domain 223 324 4.8E-17 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_06655 67200f11d229ac9cad0be1063293753b 593 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 585 2.0E-229 T 12-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Pfam PF09382 RQC domain 402 510 1.8E-31 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 SMART SM00956 406 509 1.1E-39 T 12-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 SMART SM00341 514 592 5.6E-19 T 12-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Gene3D G3DSA:1.10.10.10 335 511 8.5E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06655 67200f11d229ac9cad0be1063293753b 593 Gene3D G3DSA:1.10.150.80 512 592 9.7E-25 T 12-10-2018 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 SMART SM00490 244 325 2.6E-27 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_06655 67200f11d229ac9cad0be1063293753b 593 SUPERFAMILY SSF47819 515 591 1.4E-25 T 12-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 BEN31_06655 67200f11d229ac9cad0be1063293753b 593 SMART SM00487 14 212 1.1E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_12710 0caeae9f0c93102cc4da029bbdbcd915 191 Gene3D G3DSA:3.40.630.30 13 191 4.9E-44 T 12-10-2018 BEN31_12710 0caeae9f0c93102cc4da029bbdbcd915 191 SUPERFAMILY SSF55729 11 184 1.1E-45 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_12710 0caeae9f0c93102cc4da029bbdbcd915 191 Pfam PF13302 Acetyltransferase (GNAT) domain 19 158 1.9E-28 T 12-10-2018 IPR000182 GNAT domain BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 Pfam PF00543 Nitrogen regulatory protein P-II 7 108 9.2E-31 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 Gene3D G3DSA:3.30.70.120 1 115 7.3E-42 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 PRINTS PR00340 P-II protein signature 55 78 1.4E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 PRINTS PR00340 P-II protein signature 26 44 1.4E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 PRINTS PR00340 P-II protein signature 5 20 1.4E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 PRINTS PR00340 P-II protein signature 86 106 1.4E-21 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 ProSitePatterns PS00638 P-II protein C-terminal region signature. 86 99 - T 12-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 SUPERFAMILY SSF54913 4 115 3.11E-32 T 12-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta BEN31_17755 7c6c6f0b432ec43f394e80f8280ea405 115 SMART SM00938 7 108 7.1E-36 T 12-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 BEN31_14405 c3a68712226646a41343864fb46e50fc 889 Gene3D G3DSA:3.40.50.200 406 693 8.0E-77 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_14405 c3a68712226646a41343864fb46e50fc 889 Gene3D G3DSA:2.60.40.10 806 883 6.8E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_14405 c3a68712226646a41343864fb46e50fc 889 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 491 501 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_14405 c3a68712226646a41343864fb46e50fc 889 SUPERFAMILY SSF52743 449 725 4.45E-76 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_14405 c3a68712226646a41343864fb46e50fc 889 Pfam PF00082 Subtilase family 448 680 2.2E-43 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_14405 c3a68712226646a41343864fb46e50fc 889 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 642 652 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_14405 c3a68712226646a41343864fb46e50fc 889 PRINTS PR00723 Subtilisin serine protease family (S8) signature 641 657 2.9E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_14405 c3a68712226646a41343864fb46e50fc 889 PRINTS PR00723 Subtilisin serine protease family (S8) signature 487 500 2.9E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_14405 c3a68712226646a41343864fb46e50fc 889 PRINTS PR00723 Subtilisin serine protease family (S8) signature 447 466 2.9E-14 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_18270 83e2b315adab86b0530516490b9094df 224 Pfam PF00156 Phosphoribosyl transferase domain 161 222 1.2E-7 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_18270 83e2b315adab86b0530516490b9094df 224 SUPERFAMILY SSF53271 67 222 3.41E-22 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_18270 83e2b315adab86b0530516490b9094df 224 Gene3D G3DSA:3.40.50.2020 92 224 1.2E-16 T 12-10-2018 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 Gene3D G3DSA:1.20.140.10 235 380 1.0E-58 T 12-10-2018 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 SUPERFAMILY SSF47203 227 379 2.42E-62 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 Gene3D G3DSA:1.10.540.10 1 120 3.4E-44 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 SUPERFAMILY SSF56645 2 242 7.2E-88 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 5.8E-54 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 PIRSF PIRSF016578 220 380 4.0E-11 T 12-10-2018 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 PIRSF PIRSF016578 3 216 1.8E-8 T 12-10-2018 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.2E-39 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 Gene3D G3DSA:2.40.110.10 121 234 8.7E-44 T 12-10-2018 BEN31_17460 1e696b57c0c9b2a8729b401bc233cb9b 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 7.0E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN31_07930 21294c301dd65c8720c73c9d2761afa2 317 Gene3D G3DSA:3.20.20.370 117 316 8.6E-60 T 12-10-2018 BEN31_07930 21294c301dd65c8720c73c9d2761afa2 317 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 45 312 2.0E-137 T 12-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY BEN31_07930 21294c301dd65c8720c73c9d2761afa2 317 Pfam PF01522 Polysaccharide deacetylase 146 245 6.7E-29 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_07930 21294c301dd65c8720c73c9d2761afa2 317 SUPERFAMILY SSF88713 106 311 8.9E-59 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 Gene3D G3DSA:1.10.10.10 1 82 1.7E-31 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 Gene3D G3DSA:3.40.50.720 83 217 4.7E-49 T 12-10-2018 BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 SUPERFAMILY SSF46785 9 80 2.86E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 SMART SM00881 81 183 2.5E-20 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 Pfam PF02629 CoA binding domain 83 181 1.2E-29 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 212 39.604 T 12-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 SUPERFAMILY SSF51735 83 210 1.84E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12910 597b54462695d7eb1d28cff0d6efdce3 217 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 1.5E-19 T 12-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 BEN31_02875 0c2ff7f4680f42fc2ae88d7ca107124b 106 Pfam PF00085 Thioredoxin 8 101 2.1E-17 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN31_02875 0c2ff7f4680f42fc2ae88d7ca107124b 106 Gene3D G3DSA:3.40.30.10 1 104 8.4E-24 T 12-10-2018 BEN31_02875 0c2ff7f4680f42fc2ae88d7ca107124b 106 SUPERFAMILY SSF52833 2 102 1.45E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_01710 10aa58921dd9cccdb9a4bf2e3b855e62 78 Pfam PF10842 Protein of unknown function (DUF2642) 8 72 4.0E-31 T 12-10-2018 IPR020139 Protein of unknown function DUF2642 BEN31_01710 10aa58921dd9cccdb9a4bf2e3b855e62 78 ProDom PD058323 YUZF BH2251 3 72 6.0E-21 T 12-10-2018 IPR020139 Protein of unknown function DUF2642 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 Gene3D G3DSA:3.40.50.720 2 331 4.9E-128 T 12-10-2018 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 141 2.2E-34 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 SUPERFAMILY SSF55347 149 313 2.07E-58 T 12-10-2018 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 Gene3D G3DSA:3.30.360.10 147 313 4.9E-128 T 12-10-2018 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 339 43.342 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 12-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 SUPERFAMILY SSF51735 2 177 1.38E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 345 2.5E-139 T 12-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 SMART SM00859 2 141 5.0E-46 T 12-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 BEN31_10450 29dd2fe7b48dc43babbd3a62fe8c68b9 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 316 3.9E-33 T 12-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 Gene3D G3DSA:3.20.20.150 12 445 1.2E-186 T 12-10-2018 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 Hamap MF_00455 Xylose isomerase [xylA]. 18 442 54.919 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 SUPERFAMILY SSF51658 13 443 4.01E-173 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 Pfam PF01261 Xylose isomerase-like TIM barrel 128 290 7.8E-9 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 13 442 7.1E-218 T 12-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 186 207 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 162 181 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 306 317 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 339 350 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 139 159 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 98 120 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 213 232 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 235 259 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_06760 1aafed921b68d00c5d1727ad4d47880a 445 PRINTS PR00688 Xylose isomerase signature 277 304 1.3E-96 T 12-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 BEN31_13375 c3333aac00919b76caeb16bad2e9e50e 499 Pfam PF03703 Bacterial PH domain 263 346 8.5E-15 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BEN31_13375 c3333aac00919b76caeb16bad2e9e50e 499 Pfam PF03703 Bacterial PH domain 67 146 9.2E-20 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BEN31_13375 c3333aac00919b76caeb16bad2e9e50e 499 Pfam PF03703 Bacterial PH domain 411 491 1.4E-7 T 12-10-2018 IPR005182 Domain of unknown function DUF304 BEN31_13375 c3333aac00919b76caeb16bad2e9e50e 499 PIRSF PIRSF026631 1 499 5.1E-133 T 12-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 Gene3D G3DSA:3.30.860.10 1 92 1.3E-39 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.0E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.0E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.0E-23 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 Pfam PF00203 Ribosomal protein S19 3 83 1.4E-35 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 12-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 SUPERFAMILY SSF54570 3 84 7.85E-35 T 12-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 3.1E-47 T 12-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 PIRSF PIRSF002144 1 92 2.4E-31 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15025 e5a5e56a3c6a5cd31d354cf3a1de1e34 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.188 T 12-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 8 198 6.3E-40 T 12-10-2018 IPR003111 Lon, substrate-binding domain BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Gene3D G3DSA:1.20.58.1480 119 243 3.1E-44 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 SUPERFAMILY SSF88697 8 198 1.42E-44 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 2.5E-98 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 SMART SM00382 346 494 5.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Gene3D G3DSA:3.40.50.300 312 489 8.6E-69 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 2.3E-55 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 2.3E-55 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 2.3E-55 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 2.3E-55 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 2.3E-55 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 SUPERFAMILY SSF54211 593 768 4.55E-57 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 PIRSF PIRSF001174 1 773 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Gene3D G3DSA:3.30.230.10 591 774 1.4E-86 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 SUPERFAMILY SSF52540 308 586 3.99E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Hamap MF_01973 Lon protease [lon]. 9 770 72.285 T 12-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 SMART SM00464 8 200 7.8E-75 T 12-10-2018 IPR003111 Lon, substrate-binding domain BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 TIGRFAM TIGR00763 lon: endopeptidase La 10 769 0.0 T 12-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Gene3D G3DSA:2.30.130.40 1 114 5.1E-31 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Gene3D G3DSA:1.10.8.60 490 582 8.8E-31 T 12-10-2018 BEN31_03690 ad225a9f96277b3b0f675cefbe251dd2 774 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 487 3.7E-23 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_04770 154af00d09da3be7bba7b85f02674c81 192 Gene3D G3DSA:3.40.50.1000 1 166 2.2E-14 T 12-10-2018 IPR023214 HAD superfamily BEN31_04770 154af00d09da3be7bba7b85f02674c81 192 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 4 181 2.9E-14 T 12-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 BEN31_04770 154af00d09da3be7bba7b85f02674c81 192 PIRSF PIRSF021362 1 191 7.9E-79 T 12-10-2018 IPR009206 Nucleotidase, putative BEN31_04770 154af00d09da3be7bba7b85f02674c81 192 SUPERFAMILY SSF56784 4 162 9.78E-20 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 SUPERFAMILY SSF51735 274 564 3.1E-91 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 Gene3D G3DSA:3.40.50.720 272 566 1.6E-110 T 12-10-2018 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PIRSF PIRSF000106 1 566 5.2E-229 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 SMART SM00919 274 535 6.2E-122 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 SUPERFAMILY SSF53223 4 273 4.17E-102 T 12-10-2018 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PRINTS PR00072 Malic enzyme signature 270 286 4.1E-73 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PRINTS PR00072 Malic enzyme signature 186 208 4.1E-73 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PRINTS PR00072 Malic enzyme signature 150 179 4.1E-73 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PRINTS PR00072 Malic enzyme signature 88 112 4.1E-73 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PRINTS PR00072 Malic enzyme signature 301 317 4.1E-73 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PRINTS PR00072 Malic enzyme signature 245 263 4.1E-73 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 PRINTS PR00072 Malic enzyme signature 413 429 4.1E-73 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 Pfam PF00390 Malic enzyme, N-terminal domain 82 264 5.5E-73 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 Pfam PF03949 Malic enzyme, NAD binding domain 274 535 1.8E-103 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 Gene3D G3DSA:3.40.50.10380 16 271 2.4E-102 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 SMART SM01274 82 264 8.1E-92 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN31_17525 a32b92baaa4dc263bb7be3f841bb778e 566 ProSitePatterns PS00331 Malic enzymes signature. 270 286 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BEN31_17500 58cac8fd5892d91ae6fb5ae000664b4a 429 SUPERFAMILY SSF55205 1 416 2.78E-136 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BEN31_17500 58cac8fd5892d91ae6fb5ae000664b4a 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 42.791 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_17500 58cac8fd5892d91ae6fb5ae000664b4a 429 Gene3D G3DSA:3.65.10.10 21 228 8.5E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN31_17500 58cac8fd5892d91ae6fb5ae000664b4a 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 406 2.3E-96 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BEN31_17500 58cac8fd5892d91ae6fb5ae000664b4a 429 Gene3D G3DSA:3.65.10.10 6 413 8.5E-160 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN31_17500 58cac8fd5892d91ae6fb5ae000664b4a 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 6.4E-175 T 12-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 SUPERFAMILY SSF55424 338 457 8.76E-36 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 323 8.6E-71 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 Gene3D G3DSA:3.50.50.60 149 272 1.3E-107 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 342 450 1.3E-32 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.2E-38 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 3.2E-38 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 3.2E-38 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.2E-38 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 3.2E-38 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 SUPERFAMILY SSF51905 1 333 2.99E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PIRSF PIRSF000350 1 459 7.9E-95 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 Gene3D G3DSA:3.50.50.60 5 329 1.3E-107 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 338 359 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 3.5E-68 T 12-10-2018 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 457 2.5E-162 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN31_09840 e5d8019eee23ae7f6602fb648dae1f6c 460 Gene3D G3DSA:3.30.390.30 341 458 3.4E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 SMART SM00422 4 73 2.3E-21 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 SUPERFAMILY SSF46955 4 111 2.23E-26 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 1.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 1.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.0E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 Gene3D G3DSA:1.10.1660.10 2 117 2.8E-28 T 12-10-2018 BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 Pfam PF13411 MerR HTH family regulatory protein 6 72 1.3E-16 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_16465 41f012eb29197f34e2df31e3eab6a7b6 119 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_12785 ba309ee28db95f79395d79a636c92b06 733 SUPERFAMILY SSF54001 399 555 3.31E-42 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_12785 ba309ee28db95f79395d79a636c92b06 733 SMART SM00460 472 547 5.6E-18 T 12-10-2018 IPR002931 Transglutaminase-like BEN31_12785 ba309ee28db95f79395d79a636c92b06 733 Pfam PF01841 Transglutaminase-like superfamily 423 545 7.3E-27 T 12-10-2018 IPR002931 Transglutaminase-like BEN31_12785 ba309ee28db95f79395d79a636c92b06 733 Pfam PF13559 Domain of unknown function (DUF4129) 661 724 3.2E-9 T 12-10-2018 IPR025403 Domain of unknown function DUF4129 BEN31_12785 ba309ee28db95f79395d79a636c92b06 733 Gene3D G3DSA:3.10.620.30 385 573 3.9E-23 T 12-10-2018 BEN31_11330 234452c7df941a05ec9a51f42f26860a 363 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 351 8.0E-47 T 12-10-2018 IPR000160 GGDEF domain BEN31_11330 234452c7df941a05ec9a51f42f26860a 363 Gene3D G3DSA:3.30.70.270 188 361 2.1E-52 T 12-10-2018 BEN31_11330 234452c7df941a05ec9a51f42f26860a 363 Pfam PF07694 5TMR of 5TMR-LYT 23 148 4.6E-11 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BEN31_11330 234452c7df941a05ec9a51f42f26860a 363 SMART SM00267 181 355 2.3E-54 T 12-10-2018 IPR000160 GGDEF domain BEN31_11330 234452c7df941a05ec9a51f42f26860a 363 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 189 354 9.7E-51 T 12-10-2018 IPR000160 GGDEF domain BEN31_11330 234452c7df941a05ec9a51f42f26860a 363 SUPERFAMILY SSF55073 197 355 2.75E-46 T 12-10-2018 IPR029787 Nucleotide cyclase BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 250 2.8E-73 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 454 8.2E-36 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 Gene3D G3DSA:3.30.420.40 3 251 6.6E-82 T 12-10-2018 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 7 509 2.5E-201 T 12-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 Gene3D G3DSA:3.30.420.40 252 514 4.9E-92 T 12-10-2018 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 PIRSF PIRSF000538 4 505 9.7E-151 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 SUPERFAMILY SSF53067 7 253 1.69E-71 T 12-10-2018 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 SUPERFAMILY SSF53067 252 501 3.35E-68 T 12-10-2018 BEN31_16435 3e0a4cea0b3824a65e873461b1069113 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_06100 98dccc7d46de114e64c17fd480ff67f9 234 Gene3D G3DSA:1.10.10.10 1 115 3.2E-35 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06100 98dccc7d46de114e64c17fd480ff67f9 234 Gene3D G3DSA:1.10.10.630 125 201 2.2E-30 T 12-10-2018 IPR034829 DnaD-like domain superfamily BEN31_06100 98dccc7d46de114e64c17fd480ff67f9 234 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 129 201 1.5E-23 T 12-10-2018 IPR006343 DnaD domain BEN31_06100 98dccc7d46de114e64c17fd480ff67f9 234 SUPERFAMILY SSF158499 130 195 8.63E-20 T 12-10-2018 IPR034829 DnaD-like domain superfamily BEN31_06100 98dccc7d46de114e64c17fd480ff67f9 234 SUPERFAMILY SSF46785 23 88 4.57E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06100 98dccc7d46de114e64c17fd480ff67f9 234 Pfam PF07261 Replication initiation and membrane attachment 131 202 5.7E-25 T 12-10-2018 IPR006343 DnaD domain BEN31_14350 c37fc051f6a6bb82349530b60bde2cad 164 Pfam PF04167 Protein of unknown function (DUF402) 51 116 2.2E-13 T 12-10-2018 IPR007295 Domain of unknown function DUF402 BEN31_14350 c37fc051f6a6bb82349530b60bde2cad 164 Gene3D G3DSA:2.40.380.10 17 153 3.9E-5 T 12-10-2018 IPR035930 FomD-like superfamily BEN31_14350 c37fc051f6a6bb82349530b60bde2cad 164 SUPERFAMILY SSF159234 21 122 5.36E-24 T 12-10-2018 IPR035930 FomD-like superfamily BEN31_12580 d7ba9104318e3deaa8b65286565db08f 221 SMART SM00882 10 206 1.5E-58 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN31_12580 d7ba9104318e3deaa8b65286565db08f 221 Gene3D G3DSA:3.40.1080.10 6 218 7.7E-85 T 12-10-2018 BEN31_12580 d7ba9104318e3deaa8b65286565db08f 221 Pfam PF01144 Coenzyme A transferase 11 205 1.7E-33 T 12-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 BEN31_12580 d7ba9104318e3deaa8b65286565db08f 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 9 212 2.6E-86 T 12-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 BEN31_12580 d7ba9104318e3deaa8b65286565db08f 221 SUPERFAMILY SSF100950 7 218 1.83E-64 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 SUPERFAMILY SSF52540 11 206 5.47E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 Gene3D G3DSA:3.30.300.20 186 298 2.4E-44 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 3.0E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 Hamap MF_00367 GTPase Era [era]. 6 296 39.36 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 102 4.6E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 4.6E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 Pfam PF07650 KH domain 208 285 9.8E-23 T 12-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 169 1.9E-29 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 1.1E-115 T 12-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 SUPERFAMILY SSF54814 182 297 1.41E-43 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN31_04655 32e05f27a994f1926daffcc3c8c95691 301 Gene3D G3DSA:3.40.50.300 3 185 1.4E-48 T 12-10-2018 BEN31_12140 66b1fab02dc228091a181aec614b8adc 368 Pfam PF02898 Nitric oxide synthase, oxygenase domain 4 362 2.8E-173 T 12-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 BEN31_12140 66b1fab02dc228091a181aec614b8adc 368 PIRSF PIRSF037219 1 368 6.6E-189 T 12-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 BEN31_12140 66b1fab02dc228091a181aec614b8adc 368 Gene3D G3DSA:3.90.340.10 6 355 1.4E-155 T 12-10-2018 BEN31_12140 66b1fab02dc228091a181aec614b8adc 368 SUPERFAMILY SSF56512 3 363 2.75E-170 T 12-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 BEN31_12140 66b1fab02dc228091a181aec614b8adc 368 Gene3D G3DSA:3.90.1230.10 194 300 1.4E-155 T 12-10-2018 BEN31_12140 66b1fab02dc228091a181aec614b8adc 368 Gene3D G3DSA:3.90.440.10 83 193 1.4E-155 T 12-10-2018 BEN31_12140 66b1fab02dc228091a181aec614b8adc 368 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 66 73 - T 12-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 Gene3D G3DSA:3.30.390.10 3 127 2.3E-59 T 12-10-2018 IPR029017 Enolase-like, N-terminal BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 PIRSF PIRSF001400 1 427 3.6E-197 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 Pfam PF03952 Enolase, N-terminal domain 4 134 2.6E-62 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 SUPERFAMILY SSF54826 3 138 7.51E-61 T 12-10-2018 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 12-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 SUPERFAMILY SSF51604 139 428 1.24E-130 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 PRINTS PR00148 Enolase signature 313 324 2.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 PRINTS PR00148 Enolase signature 336 350 2.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 PRINTS PR00148 Enolase signature 161 174 2.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 PRINTS PR00148 Enolase signature 37 51 2.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 PRINTS PR00148 Enolase signature 107 123 2.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 PRINTS PR00148 Enolase signature 365 382 2.0E-47 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 Hamap MF_00318 Enolase [eno]. 2 413 46.078 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 425 5.6E-144 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 5.6E-222 T 12-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 Gene3D G3DSA:3.20.20.120 128 430 7.3E-139 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 SMART SM01192 139 427 5.0E-229 T 12-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00600 167a794d15e26eb01d4bcb398bb5ebe3 430 SMART SM01193 4 134 4.0E-100 T 12-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_03575 c84cac1e497c15bac1684cb8ccf92ba5 174 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 145 7.9E-31 T 12-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 BEN31_03575 c84cac1e497c15bac1684cb8ccf92ba5 174 SUPERFAMILY SSF56300 1 155 9.04E-42 T 12-10-2018 BEN31_03575 c84cac1e497c15bac1684cb8ccf92ba5 174 Gene3D G3DSA:3.60.21.10 1 168 4.1E-45 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_03575 c84cac1e497c15bac1684cb8ccf92ba5 174 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 149 9.5E-37 T 12-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 BEN31_00590 757d7fedbad685f3443139e08fb9c355 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 60.267 T 12-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00590 757d7fedbad685f3443139e08fb9c355 253 Pfam PF00121 Triosephosphate isomerase 5 246 1.2E-93 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00590 757d7fedbad685f3443139e08fb9c355 253 Gene3D G3DSA:3.20.20.70 2 252 7.8E-104 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_00590 757d7fedbad685f3443139e08fb9c355 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.3E-58 T 12-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00590 757d7fedbad685f3443139e08fb9c355 253 SUPERFAMILY SSF51351 1 248 8.12E-93 T 12-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00590 757d7fedbad685f3443139e08fb9c355 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 12-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_18700 596ede55f205d2e13c108fd51e9fde72 125 Gene3D G3DSA:1.10.10.10 7 117 2.4E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_18700 596ede55f205d2e13c108fd51e9fde72 125 Pfam PF13730 Helix-turn-helix domain 31 83 3.0E-11 T 12-10-2018 BEN31_18700 596ede55f205d2e13c108fd51e9fde72 125 SUPERFAMILY SSF46785 52 95 1.72E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_02790 941f241e251d291ec86ed8d290f1cdd6 73 SUPERFAMILY SSF46785 10 59 2.54E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_02790 941f241e251d291ec86ed8d290f1cdd6 73 SMART SM00420 11 56 0.0044 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_02790 941f241e251d291ec86ed8d290f1cdd6 73 Pfam PF08220 DeoR-like helix-turn-helix domain 11 54 5.8E-9 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_02790 941f241e251d291ec86ed8d290f1cdd6 73 Gene3D G3DSA:1.10.10.10 10 71 1.1E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_15870 5927f2288498b503b536c3498faf92db 79 Gene3D G3DSA:4.10.640.10 3 78 5.7E-30 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 12-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 77 8.3E-36 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 21.995 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 SUPERFAMILY SSF46911 6 78 9.02E-30 T 12-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 1.1E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 1.1E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 1.1E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 1.1E-20 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 76 3.0E-22 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15870 5927f2288498b503b536c3498faf92db 79 Pfam PF01084 Ribosomal protein S18 23 73 3.9E-27 T 12-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_10180 9d20e10d63ae890235c3d6fddfd2e17f 268 SUPERFAMILY SSF53613 4 262 2.81E-82 T 12-10-2018 IPR029056 Ribokinase-like BEN31_10180 9d20e10d63ae890235c3d6fddfd2e17f 268 Pfam PF08543 Phosphomethylpyrimidine kinase 13 257 2.5E-95 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BEN31_10180 9d20e10d63ae890235c3d6fddfd2e17f 268 Gene3D G3DSA:3.40.1190.20 1 267 6.5E-102 T 12-10-2018 IPR029056 Ribokinase-like BEN31_10180 9d20e10d63ae890235c3d6fddfd2e17f 268 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 259 1.3E-101 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 SUPERFAMILY SSF46785 721 785 1.12E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 Pfam PF09397 Ftsk gamma domain 721 780 1.1E-29 T 12-10-2018 IPR018541 FtsK gamma domain BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 Gene3D G3DSA:3.30.980.40 318 421 7.3E-39 T 12-10-2018 BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 SMART SM00382 461 643 4.3E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 Pfam PF01580 FtsK/SpoIIIE family 426 622 2.6E-64 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 Gene3D G3DSA:1.10.10.10 715 779 4.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 SUPERFAMILY SSF52540 399 694 2.12E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 Gene3D G3DSA:3.40.50.300 423 708 3.6E-111 T 12-10-2018 BEN31_07870 9c68df837f3d4aff95dacc9658a16d1a 790 SMART SM00843 718 783 3.4E-40 T 12-10-2018 IPR018541 FtsK gamma domain BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 SMART SM01060 10 393 3.9E-275 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 Pfam PF06628 Catalase-related immune-responsive 417 478 1.2E-17 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 Gene3D G3DSA:2.40.180.10 1 491 6.0E-239 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 336 344 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 Pfam PF00199 Catalase 10 390 5.3E-186 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 PRINTS PR00067 Catalase signature 126 144 2.0E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 PRINTS PR00067 Catalase signature 323 349 2.0E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 PRINTS PR00067 Catalase signature 291 318 2.0E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 PRINTS PR00067 Catalase signature 107 124 2.0E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 PRINTS PR00067 Catalase signature 86 104 2.0E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 PRINTS PR00067 Catalase signature 23 46 2.0E-76 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 ProSitePatterns PS00438 Catalase proximal active site signature. 46 62 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 PIRSF PIRSF038928 1 483 2.6E-199 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_11195 85cf2fa2dd30e83958299c05cf9d8f13 491 SUPERFAMILY SSF56634 3 485 9.16E-212 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_13650 96a63c8be0ee56c54de61bee25898c5c 252 SUPERFAMILY SSF88713 3 251 1.85E-99 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_13650 96a63c8be0ee56c54de61bee25898c5c 252 Gene3D G3DSA:3.20.20.370 2 252 3.2E-103 T 12-10-2018 BEN31_13650 96a63c8be0ee56c54de61bee25898c5c 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.414 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BEN31_13650 96a63c8be0ee56c54de61bee25898c5c 252 Pfam PF03746 LamB/YcsF family 4 241 3.4E-103 T 12-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BEN31_12850 c59ec3ce5bd792eecfc9176d26ffe06d 199 PIRSF PIRSF010372 1 199 2.0E-66 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type BEN31_12850 c59ec3ce5bd792eecfc9176d26ffe06d 199 SUPERFAMILY SSF50475 9 184 1.48E-39 T 12-10-2018 BEN31_12850 c59ec3ce5bd792eecfc9176d26ffe06d 199 Gene3D G3DSA:2.30.110.10 1 199 3.8E-61 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN31_12850 c59ec3ce5bd792eecfc9176d26ffe06d 199 Pfam PF04299 Putative FMN-binding domain 1 160 5.5E-49 T 12-10-2018 IPR007396 Transcriptional regulator PAI 2-type BEN31_14585 8708580f198818c86df529fd8b211716 444 PIRSF PIRSF002808 5 444 1.8E-172 T 12-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 BEN31_14585 8708580f198818c86df529fd8b211716 444 Gene3D G3DSA:1.20.1250.20 19 226 2.5E-57 T 12-10-2018 BEN31_14585 8708580f198818c86df529fd8b211716 444 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 1.1E-248 T 12-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 BEN31_14585 8708580f198818c86df529fd8b211716 444 Gene3D G3DSA:1.20.1250.20 240 442 7.3E-57 T 12-10-2018 BEN31_14585 8708580f198818c86df529fd8b211716 444 SUPERFAMILY SSF103473 9 436 1.03E-83 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14585 8708580f198818c86df529fd8b211716 444 Pfam PF07690 Major Facilitator Superfamily 34 399 7.7E-55 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_14585 8708580f198818c86df529fd8b211716 444 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 1.2E-163 T 12-10-2018 BEN31_14585 8708580f198818c86df529fd8b211716 444 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 12-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 BEN31_16550 1d1e84d990bf83440b55b5a641119a05 123 Pfam PF06993 Protein of unknown function (DUF1304) 11 119 4.6E-42 T 12-10-2018 IPR009732 Protein of unknown function DUF1304 BEN31_16285 3d56c8c29c89cf86110a17e0a459d287 183 Pfam PF10400 Virulence activator alpha C-term 98 179 6.4E-14 T 12-10-2018 IPR018309 Transcription regulator PadR, C-terminal BEN31_16285 3d56c8c29c89cf86110a17e0a459d287 183 SUPERFAMILY SSF46785 7 179 1.1E-37 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_16285 3d56c8c29c89cf86110a17e0a459d287 183 Gene3D G3DSA:1.10.10.10 6 93 1.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16285 3d56c8c29c89cf86110a17e0a459d287 183 Pfam PF03551 Transcriptional regulator PadR-like family 11 84 5.7E-13 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 Gene3D G3DSA:3.40.50.10860 8 276 2.1E-118 T 12-10-2018 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 SUPERFAMILY SSF51735 122 280 2.04E-52 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 2.1E-41 T 12-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 12-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 SUPERFAMILY SSF53223 1 121 1.92E-41 T 12-10-2018 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 Gene3D G3DSA:3.40.50.720 6 258 2.1E-118 T 12-10-2018 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 1.8E-73 T 12-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.1E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.1E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.1E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.1E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.1E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.1E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.1E-87 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_05140 3c6bdd7e95727506efede65b61e38199 283 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 40.333 T 12-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 BEN31_02675 9b8e39494aaf06a66afb252fcd4c04e0 107 Pfam PF14074 Protein of unknown function (DUF4257) 5 84 4.5E-35 T 12-10-2018 IPR025353 Protein of unknown function DUF4257) BEN31_02675 9b8e39494aaf06a66afb252fcd4c04e0 107 ProDom PD866859 YTVB PLASMID MEMBRANE TRANSMEMBRANE 1 107 8.0E-37 T 12-10-2018 BEN31_14870 681b29d25b022a05804c37e4598843fe 130 SUPERFAMILY SSF54211 5 130 1.78E-49 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_14870 681b29d25b022a05804c37e4598843fe 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 12-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 BEN31_14870 681b29d25b022a05804c37e4598843fe 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.395 T 12-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid BEN31_14870 681b29d25b022a05804c37e4598843fe 130 Gene3D G3DSA:3.30.230.10 1 130 1.1E-52 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_14870 681b29d25b022a05804c37e4598843fe 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.8E-48 T 12-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 291 366 6.1E-31 T 12-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 Gene3D G3DSA:2.30.330.10 280 374 5.0E-35 T 12-10-2018 IPR036429 SpoA-like superfamily BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 294 364 1.9E-24 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 Gene3D G3DSA:3.40.1550.10 29 225 3.4E-54 T 12-10-2018 IPR028976 CheC-like superfamily BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 SUPERFAMILY SSF103039 30 219 7.76E-50 T 12-10-2018 IPR028976 CheC-like superfamily BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 Pfam PF04509 CheC-like family 34 70 6.2E-15 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 Pfam PF04509 CheC-like family 131 167 7.5E-17 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 PRINTS PR00956 Flagellar motor switch protein FliN signature 311 327 2.2E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 PRINTS PR00956 Flagellar motor switch protein FliN signature 327 340 2.2E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 PRINTS PR00956 Flagellar motor switch protein FliN signature 294 310 2.2E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 PRINTS PR00956 Flagellar motor switch protein FliN signature 340 355 2.2E-29 T 12-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 BEN31_08140 193b8c00b0fb096885ad8f5475be665d 374 SUPERFAMILY SSF101801 292 372 1.83E-24 T 12-10-2018 IPR036429 SpoA-like superfamily BEN31_12940 8bbd29299b0f0b5a5548011b0204d0e4 158 Gene3D G3DSA:3.40.50.300 1 152 3.2E-41 T 12-10-2018 BEN31_12940 8bbd29299b0f0b5a5548011b0204d0e4 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 138 2.1E-44 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BEN31_12940 8bbd29299b0f0b5a5548011b0204d0e4 158 SUPERFAMILY SSF52540 25 123 2.97E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12940 8bbd29299b0f0b5a5548011b0204d0e4 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 128 5.6E-38 T 12-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 Gene3D G3DSA:2.160.10.10 253 439 2.7E-51 T 12-10-2018 BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 321 352 3.9E-6 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 1.5E-6 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 299 9.8E-10 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 SUPERFAMILY SSF51161 254 443 1.95E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 SUPERFAMILY SSF53448 4 307 2.93E-66 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 Pfam PF00483 Nucleotidyl transferase 6 217 2.3E-26 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 Gene3D G3DSA:3.90.550.10 1 252 7.9E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 41.566 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BEN31_15455 fb38fc3f3193186d7e5c99fc130bca2f 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 1.5E-188 T 12-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 Pfam PF02637 GatB domain 326 473 7.2E-56 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 Gene3D G3DSA:1.10.150.380 298 411 5.7E-39 T 12-10-2018 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 473 1.7E-180 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 SUPERFAMILY SSF89095 295 400 5.06E-36 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 SUPERFAMILY SSF55931 4 294 7.19E-121 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 12-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 39.203 T 12-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 SMART SM00845 326 473 1.2E-79 T 12-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 Gene3D G3DSA:1.10.10.410 413 476 3.0E-26 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BEN31_12420 1cd0a4eba526ade28ff2efb3e9b1ce32 476 Pfam PF02934 GatB/GatE catalytic domain 5 286 2.3E-111 T 12-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 BEN31_10560 0bee4a09d5ec03b4876e527c9454b380 498 Gene3D G3DSA:3.90.1150.170 66 483 8.5E-130 T 12-10-2018 BEN31_10560 0bee4a09d5ec03b4876e527c9454b380 498 Gene3D G3DSA:3.40.640.10 117 369 8.5E-130 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10560 0bee4a09d5ec03b4876e527c9454b380 498 SUPERFAMILY SSF53383 21 486 4.49E-121 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_10560 0bee4a09d5ec03b4876e527c9454b380 498 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 64 427 7.0E-60 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BEN31_14850 b189cea21dcbfaf3aefa8881a2f4c5e5 338 SUPERFAMILY SSF56601 24 311 8.35E-19 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_14850 b189cea21dcbfaf3aefa8881a2f4c5e5 338 Pfam PF13354 Beta-lactamase enzyme family 36 287 7.7E-18 T 12-10-2018 BEN31_14850 b189cea21dcbfaf3aefa8881a2f4c5e5 338 Gene3D G3DSA:3.40.710.10 7 321 1.9E-29 T 12-10-2018 BEN31_12330 33e4b6070fc574d7037bc49ab478cc62 243 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 72 1.7E-14 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BEN31_12330 33e4b6070fc574d7037bc49ab478cc62 243 Pfam PF01380 SIS domain 107 215 5.9E-16 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_12330 33e4b6070fc574d7037bc49ab478cc62 243 SUPERFAMILY SSF46689 5 74 4.12E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_12330 33e4b6070fc574d7037bc49ab478cc62 243 Gene3D G3DSA:3.40.50.10490 90 243 4.7E-31 T 12-10-2018 BEN31_12330 33e4b6070fc574d7037bc49ab478cc62 243 Gene3D G3DSA:1.10.10.10 4 89 9.5E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12330 33e4b6070fc574d7037bc49ab478cc62 243 SUPERFAMILY SSF53697 83 237 3.78E-30 T 12-10-2018 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 432 34.608 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 Gene3D G3DSA:3.40.1190.10 91 291 6.2E-53 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 SUPERFAMILY SSF51984 4 88 8.5E-22 T 12-10-2018 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 Pfam PF01225 Mur ligase family, catalytic domain 4 101 5.0E-24 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 429 1.5E-140 T 12-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 378 6.6E-18 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 SUPERFAMILY SSF53623 87 293 5.89E-59 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 Gene3D G3DSA:3.40.50.720 3 89 1.7E-21 T 12-10-2018 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 Pfam PF08245 Mur ligase middle domain 106 275 3.1E-26 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 Gene3D G3DSA:3.90.190.20 292 431 1.7E-39 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_02895 93aca0b0faa0f0788462f9dffbc2ae8d 432 SUPERFAMILY SSF53244 294 427 6.41E-37 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_11910 d242c651dfb9ec76edd55011f1ae1922 275 Gene3D G3DSA:3.20.80.10 121 272 2.1E-13 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_11910 d242c651dfb9ec76edd55011f1ae1922 275 SMART SM00422 2 72 4.7E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_11910 d242c651dfb9ec76edd55011f1ae1922 275 Pfam PF13411 MerR HTH family regulatory protein 2 71 1.9E-12 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_11910 d242c651dfb9ec76edd55011f1ae1922 275 SUPERFAMILY SSF55136 122 270 2.38E-10 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_11910 d242c651dfb9ec76edd55011f1ae1922 275 SMART SM00871 120 270 2.0E-13 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding BEN31_11910 d242c651dfb9ec76edd55011f1ae1922 275 SUPERFAMILY SSF46955 2 107 2.75E-23 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_11910 d242c651dfb9ec76edd55011f1ae1922 275 Gene3D G3DSA:1.10.1660.10 1 115 5.6E-23 T 12-10-2018 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 100 1.6E-20 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 Pfam PF01872 RibD C-terminal domain 148 355 3.3E-54 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 Gene3D G3DSA:3.40.430.10 137 362 2.3E-78 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 SUPERFAMILY SSF53927 4 145 4.82E-44 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 356 2.6E-121 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 SUPERFAMILY SSF53597 146 360 2.36E-62 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 PIRSF PIRSF006769 2 362 3.9E-133 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 359 1.3E-65 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BEN31_16740 aca4198e46f736211fd11a8af1ccf688 363 Gene3D G3DSA:3.40.140.10 2 136 1.4E-43 T 12-10-2018 BEN31_01590 fba173206cec04572023e59c98f72063 120 Gene3D G3DSA:2.60.300.12 4 112 1.2E-37 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN31_01590 fba173206cec04572023e59c98f72063 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 109 6.2E-39 T 12-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 BEN31_01590 fba173206cec04572023e59c98f72063 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 12-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 BEN31_01590 fba173206cec04572023e59c98f72063 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 105 1.3E-21 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BEN31_01590 fba173206cec04572023e59c98f72063 120 SUPERFAMILY SSF89360 4 98 1.35E-30 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN31_14185 02c6c05ac7663d7eaf181486e41a2385 259 SUPERFAMILY SSF103473 30 236 9.94E-5 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14185 02c6c05ac7663d7eaf181486e41a2385 259 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 32 239 1.1E-78 T 12-10-2018 IPR022493 Integral membrane YkoY BEN31_14185 02c6c05ac7663d7eaf181486e41a2385 259 Pfam PF03741 Integral membrane protein TerC family 35 212 1.0E-51 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 2.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 Pfam PF01047 MarR family 41 93 4.9E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 SMART SM00347 29 129 5.7E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 SUPERFAMILY SSF46785 6 142 2.49E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13060 3371f927cf5232bab608275432d2d7b6 157 Gene3D G3DSA:1.10.10.10 2 140 2.5E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12270 ee01a590a8f4227e40d550425659b495 679 Gene3D G3DSA:3.40.710.10 347 679 3.8E-79 T 12-10-2018 BEN31_12270 ee01a590a8f4227e40d550425659b495 679 SUPERFAMILY SSF54427 45 159 1.23E-27 T 12-10-2018 IPR032710 NTF2-like domain superfamily BEN31_12270 ee01a590a8f4227e40d550425659b495 679 Gene3D G3DSA:3.90.1310.10 169 342 1.7E-43 T 12-10-2018 BEN31_12270 ee01a590a8f4227e40d550425659b495 679 SUPERFAMILY SSF56601 348 677 7.09E-79 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_12270 ee01a590a8f4227e40d550425659b495 679 Gene3D G3DSA:3.10.450.100 38 156 1.5E-15 T 12-10-2018 BEN31_12270 ee01a590a8f4227e40d550425659b495 679 Pfam PF03717 Penicillin-binding Protein dimerisation domain 168 326 3.8E-29 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN31_12270 ee01a590a8f4227e40d550425659b495 679 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 43 161 4.9E-31 T 12-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 BEN31_12270 ee01a590a8f4227e40d550425659b495 679 Pfam PF00905 Penicillin binding protein transpeptidase domain 365 664 2.9E-65 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_12270 ee01a590a8f4227e40d550425659b495 679 SUPERFAMILY SSF56519 161 347 1.22E-33 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN31_12270 ee01a590a8f4227e40d550425659b495 679 Gene3D G3DSA:3.30.1390.30 189 260 1.7E-43 T 12-10-2018 BEN31_10880 fc24998886d7f197fe7f4f6a09c54034 312 Hamap MF_00323 Ferrochelatase [hemH]. 4 308 32.716 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN31_10880 fc24998886d7f197fe7f4f6a09c54034 312 ProSitePatterns PS00534 Ferrochelatase signature. 178 196 - T 12-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN31_10880 fc24998886d7f197fe7f4f6a09c54034 312 SUPERFAMILY SSF53800 3 308 7.36E-91 T 12-10-2018 BEN31_10880 fc24998886d7f197fe7f4f6a09c54034 312 Gene3D G3DSA:3.40.50.1400 148 289 5.5E-109 T 12-10-2018 BEN31_10880 fc24998886d7f197fe7f4f6a09c54034 312 TIGRFAM TIGR00109 hemH: ferrochelatase 2 308 1.3E-107 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN31_10880 fc24998886d7f197fe7f4f6a09c54034 312 Pfam PF00762 Ferrochelatase 5 307 1.6E-84 T 12-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 BEN31_10880 fc24998886d7f197fe7f4f6a09c54034 312 Gene3D G3DSA:3.40.50.1400 8 304 5.5E-109 T 12-10-2018 BEN31_11740 7308b13cd5d17c1fa1bf426975ee5093 49 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 1 49 17.307 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 BEN31_11740 7308b13cd5d17c1fa1bf426975ee5093 49 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 16 47 6.3E-19 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 BEN31_11740 7308b13cd5d17c1fa1bf426975ee5093 49 Pfam PF08176 Small acid-soluble spore protein K family 1 47 2.1E-28 T 12-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 SUPERFAMILY SSF47413 4 58 9.38E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.9E-15 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 Pfam PF13377 Periplasmic binding protein-like domain 163 330 8.4E-36 T 12-10-2018 BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 SUPERFAMILY SSF53822 71 314 2.08E-35 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 Gene3D G3DSA:3.40.50.2300 154 290 4.6E-37 T 12-10-2018 BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 Gene3D G3DSA:3.40.50.2300 76 321 4.6E-37 T 12-10-2018 BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 Gene3D G3DSA:1.10.260.40 1 60 1.9E-16 T 12-10-2018 BEN31_16405 1dd3792ff8ef9c0438263e84d3df6228 331 SMART SM00354 2 69 2.9E-10 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_09480 413e53825fbd917a26aec8523e35e8a7 176 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 176 30.376 T 12-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 BEN31_09480 413e53825fbd917a26aec8523e35e8a7 176 SUPERFAMILY SSF51182 10 174 9.72E-34 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_09480 413e53825fbd917a26aec8523e35e8a7 176 Gene3D G3DSA:2.60.120.10 1 171 2.8E-59 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_09480 413e53825fbd917a26aec8523e35e8a7 176 Pfam PF03079 ARD/ARD' family 4 169 3.7E-46 T 12-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 Gene3D G3DSA:4.10.910.10 72 121 6.2E-26 T 12-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 12-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.97 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.8E-35 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 Gene3D G3DSA:1.10.8.50 1 71 2.3E-29 T 12-10-2018 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.3E-53 T 12-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 SUPERFAMILY SSF46946 2 114 4.84E-46 T 12-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 BEN31_14915 0aefb7c9d7ae4aba718949d49054857e 121 PIRSF PIRSF002134 1 121 1.1E-42 T 12-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 SUPERFAMILY SSF46785 2 71 7.44E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 SMART SM00866 90 229 3.2E-39 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 Pfam PF07702 UTRA domain 92 229 1.3E-35 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 Gene3D G3DSA:3.40.1410.10 77 233 2.9E-41 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.9E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.9E-7 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 SUPERFAMILY SSF64288 79 232 3.3E-45 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 SMART SM00345 7 66 1.6E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 Gene3D G3DSA:1.10.10.10 2 70 3.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05360 121654f35e437dbdc48dd316455f2c5d 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.7E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 2.1E-50 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 2.1E-50 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 2.1E-50 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 2.1E-50 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.1E-50 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 2.1E-50 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 SUPERFAMILY SSF48179 181 332 4.42E-59 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 161 1.6E-57 T 12-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 Gene3D G3DSA:1.10.1040.10 185 341 3.1E-55 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 PIRSF PIRSF000114 1 333 3.4E-118 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 1.9E-56 T 12-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 SUPERFAMILY SSF51735 3 179 7.11E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 Gene3D G3DSA:3.40.50.720 1 184 1.5E-70 T 12-10-2018 BEN31_05865 b2f9dd72ffe2b2f8dd9df7f2456b083a 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 39.586 T 12-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 BEN31_03175 cb008d5a6f2ff29fa33de86f0d1fada4 100 Pfam PF14007 YtpI-like protein 5 90 4.1E-35 T 12-10-2018 IPR025618 YtpI-like protein BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 21 240 3.8E-80 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 Hamap MF_00104 Ribonuclease 3 [rnc]. 21 237 31.827 T 12-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 Gene3D G3DSA:3.30.160.20 173 240 1.6E-22 T 12-10-2018 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 Pfam PF14622 Ribonuclease-III-like 31 159 3.6E-36 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 Pfam PF00035 Double-stranded RNA binding motif 175 240 7.2E-17 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 SUPERFAMILY SSF69065 14 175 6.98E-52 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 Gene3D G3DSA:1.10.1520.10 17 164 5.8E-47 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 ProSitePatterns PS00517 Ribonuclease III family signature. 57 65 - T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 SUPERFAMILY SSF54768 169 243 2.51E-23 T 12-10-2018 BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 SMART SM00358 174 241 4.9E-20 T 12-10-2018 IPR014720 Double-stranded RNA-binding domain BEN31_08335 961f57f0392329999159aa360d9a6fb8 247 SMART SM00535 33 168 4.8E-60 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN31_17445 481a5af76468aae650646eccc1a04357 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 12-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 BEN31_17445 481a5af76468aae650646eccc1a04357 391 Pfam PF00108 Thiolase, N-terminal domain 5 259 1.5E-92 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BEN31_17445 481a5af76468aae650646eccc1a04357 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 12-10-2018 IPR020610 Thiolase, active site GO:0016747 BEN31_17445 481a5af76468aae650646eccc1a04357 391 SUPERFAMILY SSF53901 4 267 8.77E-80 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_17445 481a5af76468aae650646eccc1a04357 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 1.4E-139 T 12-10-2018 IPR002155 Thiolase GO:0016747 BEN31_17445 481a5af76468aae650646eccc1a04357 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 2.1E-44 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BEN31_17445 481a5af76468aae650646eccc1a04357 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 12-10-2018 IPR020613 Thiolase, conserved site GO:0016747 BEN31_17445 481a5af76468aae650646eccc1a04357 391 Gene3D G3DSA:3.40.47.10 5 274 4.4E-144 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_17445 481a5af76468aae650646eccc1a04357 391 SUPERFAMILY SSF53901 269 389 3.58E-37 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_17445 481a5af76468aae650646eccc1a04357 391 Gene3D G3DSA:3.40.47.10 125 388 4.4E-144 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_17445 481a5af76468aae650646eccc1a04357 391 PIRSF PIRSF000429 1 390 8.8E-123 T 12-10-2018 IPR002155 Thiolase GO:0016747 BEN31_06230 870900eb79bcce627ff98eac21316224 1199 Pfam PF00350 Dynamin family 47 201 1.3E-24 T 12-10-2018 IPR022812 Dynamin superfamily BEN31_06230 870900eb79bcce627ff98eac21316224 1199 Pfam PF00350 Dynamin family 621 845 2.7E-39 T 12-10-2018 IPR022812 Dynamin superfamily BEN31_06230 870900eb79bcce627ff98eac21316224 1199 Gene3D G3DSA:3.40.50.300 47 277 7.1E-37 T 12-10-2018 BEN31_06230 870900eb79bcce627ff98eac21316224 1199 SUPERFAMILY SSF52540 607 885 1.7E-29 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06230 870900eb79bcce627ff98eac21316224 1199 SUPERFAMILY SSF52540 30 290 8.18E-28 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14840 0a74f605ad99b470c6f844b53566956a 147 Pfam PF10730 Protein of unknown function (DUF2521) 1 147 1.2E-53 T 12-10-2018 IPR019667 Uncharacterised protein family YbaK BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 Gene3D G3DSA:1.10.3120.10 117 423 4.5E-96 T 12-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.0E-46 T 12-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 TIGRFAM TIGR00115 tig: trigger factor 12 421 1.5E-143 T 12-10-2018 IPR005215 Trigger factor GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 PIRSF PIRSF003095 1 424 3.7E-139 T 12-10-2018 IPR005215 Trigger factor GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 Gene3D G3DSA:3.10.50.40 151 248 4.5E-96 T 12-10-2018 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 Gene3D G3DSA:3.30.70.1050 1 116 3.2E-32 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 SUPERFAMILY SSF102735 1 129 1.28E-39 T 12-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 SUPERFAMILY SSF109998 250 423 1.06E-42 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 1.7E-47 T 12-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 SUPERFAMILY SSF54534 89 243 3.93E-38 T 12-10-2018 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 Hamap MF_00303 Trigger factor [tig]. 1 424 23.792 T 12-10-2018 IPR005215 Trigger factor GO:0015031 BEN31_03675 e1afb3828af5a2a3ac3ea5e693b20b5b 424 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 239 3.6E-15 T 12-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain BEN31_07020 a86fb13900670bcaeabaa910d6de574d 644 SUPERFAMILY SSF56801 32 638 5.89E-145 T 12-10-2018 BEN31_07020 a86fb13900670bcaeabaa910d6de574d 644 Gene3D G3DSA:3.30.300.30 513 641 1.1E-27 T 12-10-2018 BEN31_07020 a86fb13900670bcaeabaa910d6de574d 644 Gene3D G3DSA:3.40.50.12780 65 511 5.1E-88 T 12-10-2018 BEN31_07020 a86fb13900670bcaeabaa910d6de574d 644 Pfam PF00501 AMP-binding enzyme 95 517 4.6E-70 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_07020 a86fb13900670bcaeabaa910d6de574d 644 Pfam PF13193 AMP-binding enzyme C-terminal domain 526 604 4.0E-24 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_07020 a86fb13900670bcaeabaa910d6de574d 644 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 32 86 2.5E-10 T 12-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 BEN31_07020 a86fb13900670bcaeabaa910d6de574d 644 ProSitePatterns PS00455 Putative AMP-binding domain signature. 262 273 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_00445 e0ac54b7de2b9fbf0df2f3137e310d6f 156 Gene3D G3DSA:1.10.260.40 1 112 2.9E-21 T 12-10-2018 BEN31_00445 e0ac54b7de2b9fbf0df2f3137e310d6f 156 SUPERFAMILY SSF47413 2 65 3.38E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_00445 e0ac54b7de2b9fbf0df2f3137e310d6f 156 Pfam PF08671 Anti-repressor SinI 125 148 2.7E-8 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 BEN31_00445 e0ac54b7de2b9fbf0df2f3137e310d6f 156 SMART SM00530 5 61 1.6E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00445 e0ac54b7de2b9fbf0df2f3137e310d6f 156 SUPERFAMILY SSF47406 125 149 8.24E-5 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 BEN31_00445 e0ac54b7de2b9fbf0df2f3137e310d6f 156 Pfam PF01381 Helix-turn-helix 6 61 2.3E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 1.6E-87 T 12-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 Pfam PF04542 Sigma-70 region 2 34 103 4.6E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 PRINTS PR00046 Major sigma-70 factor signature 206 218 2.3E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 PRINTS PR00046 Major sigma-70 factor signature 223 238 2.3E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 PRINTS PR00046 Major sigma-70 factor signature 58 71 2.3E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 PRINTS PR00046 Major sigma-70 factor signature 238 249 2.3E-9 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 Gene3D G3DSA:1.20.140.160 106 256 2.0E-29 T 12-10-2018 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 SUPERFAMILY SSF88946 4 103 1.44E-25 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 SUPERFAMILY SSF88659 107 180 6.1E-13 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 Gene3D G3DSA:1.20.120.1810 1 102 1.2E-14 T 12-10-2018 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 1 253 7.1E-120 T 12-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 253 3.2E-33 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 Pfam PF04539 Sigma-70 region 3 113 187 4.8E-16 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 Pfam PF04545 Sigma-70, region 4 202 251 1.9E-16 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_13310 9b7823dc9f53c652c82bc8247e7b8926 262 SUPERFAMILY SSF88659 172 255 3.74E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.40.50.12780 1860 2266 3.2E-134 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF53474 2454 2729 9.58E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:1.10.1200.10 2367 2448 2.5E-20 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF52777 1599 1843 2.22E-61 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF56801 1834 2392 1.44E-146 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF00668 Condensation domain 1413 1855 1.2E-112 T 12-10-2018 IPR001242 Condensation domain BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF00550 Phosphopantetheine attachment site 1331 1393 2.7E-9 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF00550 Phosphopantetheine attachment site 2380 2443 1.1E-11 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.30.300.30 14 110 4.7E-8 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.30.300.30 640 746 2.7E-34 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2403 2418 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF08659 KR domain 1006 1194 1.9E-31 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF56801 12 106 1.7E-6 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.40.50.1820 2461 2730 4.5E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF47336 2373 2443 8.77E-16 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1896 2296 1.9E-129 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF47336 1323 1393 8.77E-15 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.40.50.12780 188 639 1.6E-114 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF00501 AMP-binding enzyme 220 645 6.0E-60 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF00501 AMP-binding enzyme 1875 2272 4.8E-98 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.40.50.1820 1318 1419 2.1E-20 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF51735 1007 1201 4.0E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.30.300.30 2267 2366 3.6E-30 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF13193 AMP-binding enzyme C-terminal domain 2280 2352 5.9E-9 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF51735 767 990 7.87E-22 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.40.50.720 759 1261 4.4E-81 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF56801 190 749 1.7E-89 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.30.559.30 1598 1839 4.4E-131 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Gene3D G3DSA:3.30.559.10 1420 1785 4.4E-131 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2016 2027 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 Pfam PF00975 Thioesterase domain 2473 2727 2.3E-20 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1352 1367 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SUPERFAMILY SSF52777 1418 1594 6.45E-39 T 12-10-2018 BEN31_13885 8e015bfc1a8c0a92971b49a89df379c5 2731 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1006 1196 4.6E-16 T 12-10-2018 BEN31_08290 78c71e2198b985e0a8b9664b92fdf63f 244 PIRSF PIRSF000386 1 243 2.7E-105 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN31_08290 78c71e2198b985e0a8b9664b92fdf63f 244 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 1.4E-76 T 12-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN31_08290 78c71e2198b985e0a8b9664b92fdf63f 244 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 244 113.338 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN31_08290 78c71e2198b985e0a8b9664b92fdf63f 244 Gene3D G3DSA:1.10.1270.20 173 244 5.3E-32 T 12-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN31_08290 78c71e2198b985e0a8b9664b92fdf63f 244 SUPERFAMILY SSF75217 1 235 1.44E-101 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN31_08290 78c71e2198b985e0a8b9664b92fdf63f 244 Gene3D G3DSA:3.40.1280.10 1 172 7.4E-73 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN31_08290 78c71e2198b985e0a8b9664b92fdf63f 244 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 7.3E-108 T 12-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.97 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 1.2E-231 T 12-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 Gene3D G3DSA:3.40.50.10490 444 600 2.9E-62 T 12-10-2018 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 Pfam PF01380 SIS domain 288 413 8.8E-35 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 Pfam PF01380 SIS domain 461 582 1.0E-18 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 Gene3D G3DSA:3.60.20.10 2 239 1.7E-70 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 SUPERFAMILY SSF56235 2 234 6.35E-65 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 Gene3D G3DSA:3.40.50.10490 243 442 2.3E-62 T 12-10-2018 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 SUPERFAMILY SSF53697 244 600 5.08E-97 T 12-10-2018 BEN31_14690 0001a6156ed94a007e0e9d9623831ce2 600 Pfam PF13522 Glutamine amidotransferase domain 62 192 4.4E-21 T 12-10-2018 BEN31_08605 5e592a1d39edc8bf01c5e0aa91221dc8 152 Hamap MF_01197 Cell division protein SepF [sepF]. 1 144 21.062 T 12-10-2018 IPR023052 Cell division protein SepF GO:0090529 BEN31_08605 5e592a1d39edc8bf01c5e0aa91221dc8 152 Pfam PF04472 Cell division protein SepF 65 136 4.8E-31 T 12-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 BEN31_08605 5e592a1d39edc8bf01c5e0aa91221dc8 152 Gene3D G3DSA:3.30.110.150 58 152 1.1E-36 T 12-10-2018 IPR038594 SepF-like superfamily BEN31_14520 7389b07ce052843da93dc31a50125827 477 PRINTS PR01046 Prolyl-tRNA synthetase signature 148 159 5.4E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_14520 7389b07ce052843da93dc31a50125827 477 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 5.4E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_14520 7389b07ce052843da93dc31a50125827 477 PRINTS PR01046 Prolyl-tRNA synthetase signature 109 120 5.4E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_14520 7389b07ce052843da93dc31a50125827 477 PRINTS PR01046 Prolyl-tRNA synthetase signature 139 147 5.4E-9 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_14520 7389b07ce052843da93dc31a50125827 477 SUPERFAMILY SSF52954 281 402 1.42E-32 T 12-10-2018 BEN31_14520 7389b07ce052843da93dc31a50125827 477 Gene3D G3DSA:3.40.50.800 286 401 2.3E-34 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BEN31_14520 7389b07ce052843da93dc31a50125827 477 Pfam PF03129 Anticodon binding domain 292 382 2.3E-19 T 12-10-2018 IPR004154 Anticodon-binding BEN31_14520 7389b07ce052843da93dc31a50125827 477 Hamap MF_01571 Proline--tRNA ligase [proS]. 10 477 43.309 T 12-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 BEN31_14520 7389b07ce052843da93dc31a50125827 477 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 411 477 3.8E-24 T 12-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 BEN31_14520 7389b07ce052843da93dc31a50125827 477 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 12 477 6.7E-179 T 12-10-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 BEN31_14520 7389b07ce052843da93dc31a50125827 477 SUPERFAMILY SSF64586 406 477 3.53E-21 T 12-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 BEN31_14520 7389b07ce052843da93dc31a50125827 477 SMART SM00946 410 477 7.7E-30 T 12-10-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 BEN31_14520 7389b07ce052843da93dc31a50125827 477 Gene3D G3DSA:3.30.930.10 6 285 8.7E-102 T 12-10-2018 BEN31_14520 7389b07ce052843da93dc31a50125827 477 Gene3D G3DSA:3.30.110.30 404 477 8.4E-24 T 12-10-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 BEN31_14520 7389b07ce052843da93dc31a50125827 477 SUPERFAMILY SSF55681 14 279 3.73E-76 T 12-10-2018 BEN31_14520 7389b07ce052843da93dc31a50125827 477 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 104 273 1.5E-16 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_05055 544883094ca3eea714b848015917a79d 175 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 20 160 1.0E-47 T 12-10-2018 IPR024563 Uncharacterised protein family YqhR BEN31_05055 544883094ca3eea714b848015917a79d 175 Pfam PF11085 Conserved membrane protein YqhR 5 168 1.0E-75 T 12-10-2018 IPR024563 Uncharacterised protein family YqhR BEN31_16505 edbc56ab80de75fac6a95e9f8bca5b92 223 PIRSF PIRSF001357 1 222 2.5E-79 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BEN31_16505 edbc56ab80de75fac6a95e9f8bca5b92 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 212 1.0E-95 T 12-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BEN31_16505 edbc56ab80de75fac6a95e9f8bca5b92 223 Gene3D G3DSA:3.20.20.70 1 218 1.6E-97 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_16505 edbc56ab80de75fac6a95e9f8bca5b92 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 37.659 T 12-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 BEN31_16505 edbc56ab80de75fac6a95e9f8bca5b92 223 SMART SM01133 2 214 1.5E-106 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BEN31_16505 edbc56ab80de75fac6a95e9f8bca5b92 223 SUPERFAMILY SSF51569 2 214 1.36E-83 T 12-10-2018 BEN31_16505 edbc56ab80de75fac6a95e9f8bca5b92 223 Pfam PF01791 DeoC/LacD family aldolase 4 210 1.8E-21 T 12-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 42.399 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 Gene3D G3DSA:1.10.560.10 7 518 1.7E-235 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 Gene3D G3DSA:3.50.7.10 190 370 1.7E-235 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 PRINTS PR00298 60kDa chaperonin signature 82 109 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 PRINTS PR00298 60kDa chaperonin signature 26 52 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 PRINTS PR00298 60kDa chaperonin signature 266 289 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 PRINTS PR00298 60kDa chaperonin signature 396 417 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 PRINTS PR00298 60kDa chaperonin signature 348 373 2.0E-73 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 SUPERFAMILY SSF48592 5 518 5.33E-80 T 12-10-2018 IPR027413 GroEL-like equatorial domain superfamily BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 Gene3D G3DSA:3.30.260.10 135 408 1.7E-235 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 SUPERFAMILY SSF52029 183 374 6.88E-85 T 12-10-2018 IPR027409 GroEL-like apical domain superfamily BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 12-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 SUPERFAMILY SSF54849 136 204 3.43E-27 T 12-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 6.9E-259 T 12-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 BEN31_12875 c8573f7f7bcb63dc11ef9da75ec8f1dc 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 2.0E-104 T 12-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 7 427 34.685 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 11 426 3.0E-133 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 PIRSF PIRSF000505 1 428 4.1E-122 T 12-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 SUPERFAMILY SSF55205 2 423 3.43E-134 T 12-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 ProSitePatterns PS00104 EPSP synthase signature 1. 85 99 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 Gene3D G3DSA:3.65.10.10 19 227 2.0E-157 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 12-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 Gene3D G3DSA:3.65.10.10 10 420 2.0E-157 T 12-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 BEN31_05980 09abc25e1c0f31cd6704464f276122d2 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 5 420 8.8E-125 T 12-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 BEN31_06045 a626a6c94647ec1ba4aa489d87b0e21b 234 Pfam PF02585 GlcNAc-PI de-N-acetylase 7 123 1.7E-23 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 BEN31_06045 a626a6c94647ec1ba4aa489d87b0e21b 234 Gene3D G3DSA:3.40.50.10320 1 234 6.6E-83 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BEN31_06045 a626a6c94647ec1ba4aa489d87b0e21b 234 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 4 226 4.3E-101 T 12-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 BEN31_06045 a626a6c94647ec1ba4aa489d87b0e21b 234 SUPERFAMILY SSF102588 4 230 1.83E-55 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 SUPERFAMILY SSF55604 6 81 3.14E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 Gene3D G3DSA:3.30.1360.60 1 77 9.0E-28 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 Pfam PF00367 phosphotransferase system, EIIB 9 41 1.2E-11 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 536 548 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 SUPERFAMILY SSF51261 468 617 7.32E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 Gene3D G3DSA:2.70.70.10 462 618 3.1E-54 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 475 594 1.5E-42 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 618 4.5E-231 T 12-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 Pfam PF02378 Phosphotransferase system, EIIC 110 388 2.8E-29 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_14455 8743868a006995cf1b175c8ac92bf9d8 619 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 473 596 9.2E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_13080 78b388d848c8460e6010f234f8636fc9 89 Pfam PF14150 YesK-like protein 2 81 4.1E-25 T 12-10-2018 IPR025434 YesK-like protein BEN31_05835 0ad7dd4440b318925b9f1d74ede05f19 355 Gene3D G3DSA:3.20.20.70 2 353 1.6E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_05835 0ad7dd4440b318925b9f1d74ede05f19 355 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 1.2E-117 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BEN31_05835 0ad7dd4440b318925b9f1d74ede05f19 355 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 38.554 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BEN31_05835 0ad7dd4440b318925b9f1d74ede05f19 355 Pfam PF01070 FMN-dependent dehydrogenase 166 326 1.3E-20 T 12-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 BEN31_05835 0ad7dd4440b318925b9f1d74ede05f19 355 SMART SM01240 23 336 0.0024 T 12-10-2018 BEN31_05835 0ad7dd4440b318925b9f1d74ede05f19 355 PIRSF PIRSF003314 1 340 6.0E-122 T 12-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 BEN31_05835 0ad7dd4440b318925b9f1d74ede05f19 355 SUPERFAMILY SSF51395 23 347 2.56E-85 T 12-10-2018 BEN31_12275 55a32eaafa71a8259ec78b0d49459667 412 Gene3D G3DSA:1.20.1250.20 222 405 4.1E-22 T 12-10-2018 BEN31_12275 55a32eaafa71a8259ec78b0d49459667 412 Gene3D G3DSA:1.20.1250.20 18 204 1.4E-18 T 12-10-2018 BEN31_12275 55a32eaafa71a8259ec78b0d49459667 412 SUPERFAMILY SSF103473 15 401 9.94E-55 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_12275 55a32eaafa71a8259ec78b0d49459667 412 Pfam PF07690 Major Facilitator Superfamily 28 366 4.6E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 454 471 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 614 626 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 SUPERFAMILY SSF55604 443 513 4.58E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 64 365 3.1E-95 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 Gene3D G3DSA:3.30.1360.60 439 517 1.4E-28 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 552 672 2.7E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 516 4.5E-247 T 12-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 500 3.7E-28 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 Gene3D G3DSA:2.70.70.10 538 699 3.5E-63 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 Pfam PF02378 Phosphotransferase system, EIIC 14 354 4.3E-98 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 SUPERFAMILY SSF51261 545 696 2.79E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 553 672 2.8E-47 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_09370 dedc8dfd075565a00961fa2e169c6322 699 Pfam PF00367 phosphotransferase system, EIIB 444 476 8.7E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_10810 5f61878e91ad601b7884f48bdd374042 431 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 251 420 5.7E-29 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_10810 5f61878e91ad601b7884f48bdd374042 431 SUPERFAMILY SSF46458 28 177 1.48E-37 T 12-10-2018 IPR009050 Globin-like superfamily BEN31_10810 5f61878e91ad601b7884f48bdd374042 431 SUPERFAMILY SSF58104 199 429 2.49E-48 T 12-10-2018 BEN31_10810 5f61878e91ad601b7884f48bdd374042 431 Pfam PF11563 Protoglobin 30 184 5.8E-41 T 12-10-2018 BEN31_10810 5f61878e91ad601b7884f48bdd374042 431 Gene3D G3DSA:1.10.287.950 206 430 5.9E-40 T 12-10-2018 BEN31_10810 5f61878e91ad601b7884f48bdd374042 431 SMART SM00283 193 426 3.2E-21 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_10810 5f61878e91ad601b7884f48bdd374042 431 Gene3D G3DSA:1.10.490.10 26 177 3.8E-40 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BEN31_10745 fcc434415e89012fd48c1b5a140c442c 314 Gene3D G3DSA:3.40.50.1980 45 305 7.1E-100 T 12-10-2018 BEN31_10745 fcc434415e89012fd48c1b5a140c442c 314 Gene3D G3DSA:3.40.50.12260 182 287 7.1E-100 T 12-10-2018 BEN31_10745 fcc434415e89012fd48c1b5a140c442c 314 SUPERFAMILY SSF53807 43 299 1.81E-66 T 12-10-2018 BEN31_10745 fcc434415e89012fd48c1b5a140c442c 314 Pfam PF01497 Periplasmic binding protein 54 288 2.3E-38 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 5 532 1.1E-283 T 12-10-2018 IPR014251 Sporulation protease LonB BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 342 534 1.6E-34 T 12-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 1.2E-33 T 12-10-2018 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 1.2E-33 T 12-10-2018 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 1.2E-33 T 12-10-2018 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 1.2E-33 T 12-10-2018 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 1.2E-33 T 12-10-2018 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 SUPERFAMILY SSF52540 55 328 1.1E-44 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 Gene3D G3DSA:3.30.230.10 342 551 9.4E-53 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 442 450 - T 12-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 Gene3D G3DSA:3.40.50.300 52 263 3.8E-32 T 12-10-2018 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 265 1.0E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 SUPERFAMILY SSF54211 352 532 1.33E-41 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_03685 77471c8ce943b86cca740ec2921588f1 553 SMART SM00382 89 267 2.2E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 Pfam PF00476 DNA polymerase family A 342 732 1.3E-60 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 SUPERFAMILY SSF53098 113 304 4.11E-36 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 Pfam PF01612 3'-5' exonuclease 115 299 7.3E-29 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 PRINTS PR00868 DNA-polymerase family A (pol I) signature 588 599 2.0E-12 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 PRINTS PR00868 DNA-polymerase family A (pol I) signature 442 464 2.0E-12 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 PRINTS PR00868 DNA-polymerase family A (pol I) signature 490 513 2.0E-12 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 693 2.0E-12 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 PRINTS PR00868 DNA-polymerase family A (pol I) signature 650 666 2.0E-12 T 12-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 Gene3D G3DSA:1.20.1060.10 331 445 6.4E-13 T 12-10-2018 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 SMART SM00482 476 697 1.0E-18 T 12-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 SMART SM00479 135 306 0.0045 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 Gene3D G3DSA:3.30.70.370 450 730 1.5E-53 T 12-10-2018 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 Gene3D G3DSA:1.10.150.20 499 657 1.5E-53 T 12-10-2018 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 Gene3D G3DSA:3.30.420.10 112 329 9.0E-57 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 SMART SM00474 115 305 2.0E-23 T 12-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 BEN31_00055 343a611dbbe7b4a110aa134399d81827 746 SUPERFAMILY SSF56672 311 732 1.33E-83 T 12-10-2018 BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 SUPERFAMILY SSF47060 3 89 5.59E-37 T 12-10-2018 IPR009068 S15/NS1, RNA-binding BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 2.4E-42 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 2.0E-37 T 12-10-2018 BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 SMART SM01387 8 88 1.3E-52 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.274 T 12-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-38 T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 Gene3D G3DSA:1.10.287.10 2 89 6.1E-38 T 12-10-2018 BEN31_07940 ae052aa59e29664fa0abffb0d2348635 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 12-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_07575 962f1361c0d04222d1f49313447bc345 193 SMART SM00014 57 164 2.1E-17 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN31_07575 962f1361c0d04222d1f49313447bc345 193 Gene3D G3DSA:1.20.144.10 77 190 3.7E-21 T 12-10-2018 BEN31_07575 962f1361c0d04222d1f49313447bc345 193 SUPERFAMILY SSF48317 2 172 7.33E-34 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN31_07575 962f1361c0d04222d1f49313447bc345 193 Pfam PF01569 PAP2 superfamily 58 166 3.4E-19 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 SMART SM00829 15 318 1.4E-16 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 153 174 - T 12-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 Pfam PF13602 Zinc-binding dehydrogenase 195 318 7.7E-24 T 12-10-2018 BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 93 5.0E-8 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 Gene3D G3DSA:3.40.50.720 136 269 2.5E-83 T 12-10-2018 BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 SUPERFAMILY SSF50129 4 157 1.37E-31 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 Gene3D G3DSA:3.90.180.10 25 318 2.5E-83 T 12-10-2018 BEN31_13200 c335ca612c69d0ee37d619c1976bd0fb 324 SUPERFAMILY SSF51735 125 295 4.78E-35 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07905 13af040467df7a20e058033dc6f85633 197 Pfam PF02441 Flavoprotein 7 168 2.9E-19 T 12-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 BEN31_07905 13af040467df7a20e058033dc6f85633 197 SUPERFAMILY SSF52507 5 185 2.09E-30 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BEN31_07905 13af040467df7a20e058033dc6f85633 197 Gene3D G3DSA:3.40.50.1950 1 197 1.1E-58 T 12-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 BEN31_07905 13af040467df7a20e058033dc6f85633 197 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 7 193 2.4E-105 T 12-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B BEN31_07905 13af040467df7a20e058033dc6f85633 197 PIRSF PIRSF001390 1 197 7.4E-81 T 12-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B BEN31_11465 92600eb9d6ed9463fcdf7e92f5590cf5 181 Gene3D G3DSA:3.40.50.1240 1 173 3.1E-30 T 12-10-2018 IPR029033 Histidine phosphatase superfamily BEN31_11465 92600eb9d6ed9463fcdf7e92f5590cf5 181 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 167 1.7E-24 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN31_11465 92600eb9d6ed9463fcdf7e92f5590cf5 181 SUPERFAMILY SSF53254 1 175 4.98E-30 T 12-10-2018 IPR029033 Histidine phosphatase superfamily BEN31_11465 92600eb9d6ed9463fcdf7e92f5590cf5 181 SMART SM00855 3 141 1.7E-5 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 9 562 2.4E-254 T 12-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 SMART SM00642 17 423 2.3E-156 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 Gene3D G3DSA:2.60.40.1180 483 566 3.0E-22 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 Gene3D G3DSA:3.90.400.10 109 179 8.0E-195 T 12-10-2018 BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 SUPERFAMILY SSF51445 8 479 1.2E-151 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 Pfam PF16657 Maltogenic Amylase, C-terminal domain 482 557 2.4E-9 T 12-10-2018 IPR032091 Maltogenic Amylase, C-terminal BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 SUPERFAMILY SSF51011 482 563 4.32E-17 T 12-10-2018 BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 Gene3D G3DSA:3.20.20.80 9 474 8.0E-195 T 12-10-2018 BEN31_12065 202721d2e1cd405288ffbd5d931030ec 566 Pfam PF00128 Alpha amylase, catalytic domain 32 380 1.8E-126 T 12-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 BEN31_06545 24c94c5adce11779373d8e0c84441239 157 Gene3D G3DSA:2.60.40.790 62 146 1.1E-10 T 12-10-2018 IPR008978 HSP20-like chaperone BEN31_06545 24c94c5adce11779373d8e0c84441239 157 SUPERFAMILY SSF49764 69 155 1.31E-12 T 12-10-2018 IPR008978 HSP20-like chaperone BEN31_04970 a1be8303a975963dc14825b8f590d63c 64 Pfam PF14038 YqzE-like protein 2 54 8.6E-28 T 12-10-2018 IPR025622 YqzE-like protein BEN31_14510 ec0375588e5bbb703a8804af7cd73968 255 SUPERFAMILY SSF55729 136 254 1.5E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_14510 ec0375588e5bbb703a8804af7cd73968 255 Gene3D G3DSA:3.40.630.30 28 255 1.1E-21 T 12-10-2018 BEN31_14510 ec0375588e5bbb703a8804af7cd73968 255 Pfam PF13673 Acetyltransferase (GNAT) domain 164 253 1.1E-8 T 12-10-2018 IPR000182 GNAT domain BEN31_00880 23428fb94ac3cfa038a74d7c5ce25444 127 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 10 93 1.0E-9 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BEN31_00880 23428fb94ac3cfa038a74d7c5ce25444 127 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 120 2.2E-24 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BEN31_03495 b901a4f41a6643099646806bf3854a93 409 SUPERFAMILY SSF55021 249 325 2.02E-15 T 12-10-2018 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 400 1.9E-140 T 12-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 Gene3D G3DSA:3.30.70.260 260 337 2.7E-49 T 12-10-2018 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 SUPERFAMILY SSF53633 4 242 2.75E-72 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_03495 b901a4f41a6643099646806bf3854a93 409 SUPERFAMILY SSF55021 329 404 2.55E-22 T 12-10-2018 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 6.6E-151 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 Pfam PF13840 ACT domain 335 398 4.8E-15 T 12-10-2018 IPR027795 CASTOR, ACT domain BEN31_03495 b901a4f41a6643099646806bf3854a93 409 Gene3D G3DSA:3.30.70.260 254 402 2.7E-49 T 12-10-2018 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 Pfam PF00696 Amino acid kinase family 3 229 2.2E-53 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 Gene3D G3DSA:3.40.1160.10 1 253 3.9E-91 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_03495 b901a4f41a6643099646806bf3854a93 409 PIRSF PIRSF000726 55 408 1.9E-136 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 PIRSF PIRSF000726 1 61 1.2E-21 T 12-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_03495 b901a4f41a6643099646806bf3854a93 409 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 12-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 450 7.4E-24 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Gene3D G3DSA:3.30.310.50 469 573 4.2E-10 T 12-10-2018 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 1.1E-42 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 SUPERFAMILY SSF53738 33 235 2.08E-46 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 SUPERFAMILY SSF53738 208 319 6.28E-21 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 SUPERFAMILY SSF53738 304 455 2.35E-32 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Gene3D G3DSA:3.40.120.10 326 452 2.4E-36 T 12-10-2018 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 318 8.6E-25 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 506 550 1.7E-9 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Gene3D G3DSA:3.40.120.10 34 190 8.4E-48 T 12-10-2018 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 SUPERFAMILY SSF55957 446 576 5.89E-15 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 Gene3D G3DSA:3.40.120.10 209 325 1.2E-23 T 12-10-2018 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 6.5E-6 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_11225 17d22ac0c7e26a18328f6b42567714a3 581 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 6.5E-6 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_06490 4e3a1e62001c6a7872c8ef43f05198c4 105 ProDom PD030115 YODL GK1575 3 105 7.0E-24 T 12-10-2018 BEN31_06490 4e3a1e62001c6a7872c8ef43f05198c4 105 Pfam PF14191 YodL-like 32 88 9.3E-6 T 12-10-2018 IPR025923 YodL-like BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 Gene3D G3DSA:2.40.10.10 212 328 1.4E-40 T 12-10-2018 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 Pfam PF13180 PDZ domain 329 428 9.3E-23 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 Pfam PF13365 Trypsin-like peptidase domain 147 291 1.8E-31 T 12-10-2018 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 PRINTS PR00834 HtrA/DegQ protease family signature 221 245 8.5E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 PRINTS PR00834 HtrA/DegQ protease family signature 180 200 8.5E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 PRINTS PR00834 HtrA/DegQ protease family signature 262 279 8.5E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 PRINTS PR00834 HtrA/DegQ protease family signature 376 388 8.5E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 PRINTS PR00834 HtrA/DegQ protease family signature 284 301 8.5E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 PRINTS PR00834 HtrA/DegQ protease family signature 159 171 8.5E-38 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 Gene3D G3DSA:2.30.42.10 329 437 4.2E-25 T 12-10-2018 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 SMART SM00228 329 419 4.6E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 SUPERFAMILY SSF50156 310 428 1.58E-20 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 SUPERFAMILY SSF50494 94 325 8.25E-59 T 12-10-2018 IPR009003 Peptidase S1, PA clan BEN31_09805 1b6b739bf0781bb903fe069ffc8fb1de 438 Gene3D G3DSA:2.40.10.10 82 202 3.2E-28 T 12-10-2018 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 297 2.3E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 SMART SM00387 341 449 1.9E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 4.0E-13 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 SUPERFAMILY SSF47384 215 295 2.16E-16 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 Gene3D G3DSA:1.10.287.130 180 297 1.2E-24 T 12-10-2018 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 SMART SM00388 231 298 5.0E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 SUPERFAMILY SSF55874 288 447 6.55E-40 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 446 6.3E-22 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09640 95d9fa2b9207c10ff51117ae7ca406b2 449 Gene3D G3DSA:3.30.565.10 302 449 4.2E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_06745 9c0f07e8b66923840eae70cbedaaf8dc 463 Pfam PF13347 MFS/sugar transport protein 16 437 1.0E-104 T 12-10-2018 BEN31_06745 9c0f07e8b66923840eae70cbedaaf8dc 463 Gene3D G3DSA:1.20.1250.20 232 429 1.7E-10 T 12-10-2018 BEN31_06745 9c0f07e8b66923840eae70cbedaaf8dc 463 Gene3D G3DSA:1.20.1250.20 16 214 4.0E-16 T 12-10-2018 BEN31_06745 9c0f07e8b66923840eae70cbedaaf8dc 463 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 14 450 7.0E-152 T 12-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 BEN31_06745 9c0f07e8b66923840eae70cbedaaf8dc 463 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 65 90 - T 12-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 BEN31_06745 9c0f07e8b66923840eae70cbedaaf8dc 463 SUPERFAMILY SSF103473 17 424 1.44E-40 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_15650 b98c338da4fec7242cc5aa9c5e5c58c1 184 SUPERFAMILY SSF52499 4 180 6.02E-45 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_15650 b98c338da4fec7242cc5aa9c5e5c58c1 184 Gene3D G3DSA:3.40.50.850 1 178 1.1E-42 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_15650 b98c338da4fec7242cc5aa9c5e5c58c1 184 Pfam PF00857 Isochorismatase family 7 174 2.1E-31 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 Gene3D G3DSA:3.40.440.10 5 252 6.1E-105 T 12-10-2018 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 Gene3D G3DSA:1.10.300.10 100 199 6.1E-105 T 12-10-2018 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 12-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 12-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 Pfam PF00709 Adenylosuccinate synthetase 4 420 1.2E-185 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 Gene3D G3DSA:3.90.170.10 265 429 2.7E-71 T 12-10-2018 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 1.3E-200 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 SMART SM00788 3 422 1.8E-293 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 212.6 T 12-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 BEN31_16030 1051df2eac49daf438b1c665ca713c5a 429 SUPERFAMILY SSF52540 1 427 1.38E-175 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12440 1e9d2b16834513c261a5cc99b94c4127 230 Pfam PF02308 MgtC family 13 141 1.0E-32 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN31_12440 1e9d2b16834513c261a5cc99b94c4127 230 PRINTS PR01837 MgtC/SapB protein signature 16 35 7.2E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN31_12440 1e9d2b16834513c261a5cc99b94c4127 230 PRINTS PR01837 MgtC/SapB protein signature 97 121 7.2E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN31_12440 1e9d2b16834513c261a5cc99b94c4127 230 PRINTS PR01837 MgtC/SapB protein signature 35 53 7.2E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN31_12440 1e9d2b16834513c261a5cc99b94c4127 230 PRINTS PR01837 MgtC/SapB protein signature 69 91 7.2E-41 T 12-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 BEN31_05910 3055b707ef45d8cdb5ea80e3e34803e4 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 2.5E-168 T 12-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 BEN31_05910 3055b707ef45d8cdb5ea80e3e34803e4 320 Pfam PF00348 Polyprenyl synthetase 31 254 3.4E-67 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BEN31_05910 3055b707ef45d8cdb5ea80e3e34803e4 320 Gene3D G3DSA:1.10.600.10 7 320 7.4E-99 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_05910 3055b707ef45d8cdb5ea80e3e34803e4 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN31_05910 3055b707ef45d8cdb5ea80e3e34803e4 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN31_05910 3055b707ef45d8cdb5ea80e3e34803e4 320 SUPERFAMILY SSF48576 6 319 2.16E-85 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_01700 a50291af8974a4bf351404dd258d84b8 177 TIGRFAM TIGR00277 HDIG: HDIG domain 25 92 2.0E-8 T 12-10-2018 IPR006675 HDIG domain BEN31_01700 a50291af8974a4bf351404dd258d84b8 177 Pfam PF01966 HD domain 26 138 1.1E-13 T 12-10-2018 IPR006674 HD domain BEN31_01700 a50291af8974a4bf351404dd258d84b8 177 Gene3D G3DSA:1.10.3210.10 7 170 2.8E-16 T 12-10-2018 BEN31_01700 a50291af8974a4bf351404dd258d84b8 177 SMART SM00471 19 149 9.3E-9 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_01700 a50291af8974a4bf351404dd258d84b8 177 SUPERFAMILY SSF109604 16 138 2.55E-20 T 12-10-2018 BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 PIRSF PIRSF026579 1 178 2.8E-95 T 12-10-2018 IPR014213 Sporulation stage V, protein T BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 SMART SM00966 8 52 1.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 12-10-2018 BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 Gene3D G3DSA:3.30.450.40 56 178 8.0E-48 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 5.8E-47 T 12-10-2018 IPR039472 Sporulation stage V protein T, GAF domain BEN31_15425 0739483bb1f39435f232ef83e46301a2 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 2.3E-89 T 12-10-2018 IPR014213 Sporulation stage V, protein T BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 1.1E-44 T 12-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 Hamap MF_00551 Uridine kinase [udk]. 2 206 41.493 T 12-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 PRINTS PR00988 Uridine kinase signature 5 22 9.8E-36 T 12-10-2018 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 PRINTS PR00988 Uridine kinase signature 35 46 9.8E-36 T 12-10-2018 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 PRINTS PR00988 Uridine kinase signature 150 161 9.8E-36 T 12-10-2018 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 PRINTS PR00988 Uridine kinase signature 136 146 9.8E-36 T 12-10-2018 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 PRINTS PR00988 Uridine kinase signature 80 95 9.8E-36 T 12-10-2018 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 PRINTS PR00988 Uridine kinase signature 172 185 9.8E-36 T 12-10-2018 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 SUPERFAMILY SSF52540 4 197 6.36E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 TIGRFAM TIGR00235 udk: uridine kinase 4 205 1.4E-91 T 12-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 BEN31_04140 355f1102d5f89399ddc00b1e809eb889 210 Gene3D G3DSA:3.40.50.300 1 210 7.9E-67 T 12-10-2018 BEN31_03815 d37eb1c603d3a9261fc4239476f9aca1 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 12-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_03815 d37eb1c603d3a9261fc4239476f9aca1 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.4E-40 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03815 d37eb1c603d3a9261fc4239476f9aca1 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 27.129 T 12-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03815 d37eb1c603d3a9261fc4239476f9aca1 102 SUPERFAMILY SSF141091 1 101 6.28E-39 T 12-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03815 d37eb1c603d3a9261fc4239476f9aca1 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.2E-40 T 12-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 4.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 4.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 4.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 4.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 4.0E-28 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 195 9.1E-42 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 SUPERFAMILY SSF54719 89 200 4.58E-48 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 Gene3D G3DSA:2.40.500.20 91 202 4.8E-51 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 PIRSF PIRSF000349 1 202 2.4E-85 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 SUPERFAMILY SSF46609 1 91 6.42E-39 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 3.3E-34 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_04805 0e40cb5e38267604b3486125fda109ac 202 Gene3D G3DSA:1.10.287.990 20 90 1.0E-31 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_05555 a28ad2a4da3aba942e4bdf59398e6d91 117 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 107 1.9E-38 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 BEN31_05555 a28ad2a4da3aba942e4bdf59398e6d91 117 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 5 110 3.0E-46 T 12-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 BEN31_05555 a28ad2a4da3aba942e4bdf59398e6d91 117 Pfam PF01740 STAS domain 5 109 2.0E-25 T 12-10-2018 IPR002645 STAS domain BEN31_05555 a28ad2a4da3aba942e4bdf59398e6d91 117 SUPERFAMILY SSF52091 3 113 2.75E-31 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_05555 a28ad2a4da3aba942e4bdf59398e6d91 117 Gene3D G3DSA:3.30.750.24 2 117 1.7E-34 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 71 161 6.6E-17 T 12-10-2018 IPR016188 PurM-like, N-terminal domain BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 9.9E-149 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 339 6.7E-37 T 12-10-2018 IPR010918 PurM-like, C-terminal domain BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 Gene3D G3DSA:3.30.1330.10 1 167 6.9E-68 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 Gene3D G3DSA:3.90.650.10 168 345 1.1E-70 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 340 47.716 T 12-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 SUPERFAMILY SSF55326 4 166 4.34E-49 T 12-10-2018 IPR036921 PurM-like, N-terminal domain superfamily BEN31_12625 bb1839af83c853453f3ec6c0792fbefc 346 SUPERFAMILY SSF56042 168 338 2.54E-57 T 12-10-2018 IPR036676 PurM-like, C-terminal domain superfamily BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 Gene3D G3DSA:1.10.720.90 2 55 1.6E-26 T 12-10-2018 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-51 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 SUPERFAMILY SSF74731 2 116 2.09E-50 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.8E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.8E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.8E-41 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 Gene3D G3DSA:1.10.1900.20 56 118 3.7E-29 T 12-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.092 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-13 T 12-10-2018 BEN31_03375 272697aa962134901f9cf55fd24e8e81 119 Pfam PF00453 Ribosomal protein L20 3 109 6.0E-50 T 12-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 Hamap MF_00109 Shikimate kinase [aroK]. 11 177 25.145 T 12-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 Gene3D G3DSA:3.40.50.300 2 178 7.0E-46 T 12-10-2018 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 Pfam PF01202 Shikimate kinase 20 177 3.5E-43 T 12-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 SUPERFAMILY SSF52540 13 173 6.06E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 PRINTS PR01100 Shikimate kinase family signature 106 123 4.5E-17 T 12-10-2018 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 PRINTS PR01100 Shikimate kinase family signature 66 74 4.5E-17 T 12-10-2018 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 PRINTS PR01100 Shikimate kinase family signature 85 94 4.5E-17 T 12-10-2018 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 PRINTS PR01100 Shikimate kinase family signature 14 29 4.5E-17 T 12-10-2018 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 PRINTS PR01100 Shikimate kinase family signature 38 51 4.5E-17 T 12-10-2018 BEN31_14040 78bc18ce5e134d2cc5168a7731473a20 185 ProSitePatterns PS01128 Shikimate kinase signature. 67 93 - T 12-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 Gene3D G3DSA:3.40.50.150 18 338 5.9E-92 T 12-10-2018 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 Pfam PF00145 C-5 cytosine-specific DNA methylase 16 340 2.6E-80 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 16 32 5.7E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 162 175 5.7E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 116 130 5.7E-14 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 17 340 3.3E-76 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 77 89 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 Gene3D G3DSA:3.90.120.10 157 331 5.9E-92 T 12-10-2018 BEN31_00160 e5f3956af9a2bd3e82a9622149a7e20b 348 SUPERFAMILY SSF53335 15 344 2.13E-92 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 506 5.3E-183 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 SUPERFAMILY SSF103473 15 519 1.57E-74 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 9.0E-12 T 12-10-2018 BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 9.0E-12 T 12-10-2018 BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 9.0E-12 T 12-10-2018 BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 9.0E-12 T 12-10-2018 BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 Gene3D G3DSA:1.20.1720.10 17 226 9.6E-44 T 12-10-2018 BEN31_11350 78c7ffaa570a4b9fc9ff5ffa9bbe8d63 539 Pfam PF07690 Major Facilitator Superfamily 22 412 1.6E-57 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_10390 370569c65a7e99e43821df2a94c7f07e 320 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 28 318 5.6E-71 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 BEN31_10390 370569c65a7e99e43821df2a94c7f07e 320 Gene3D G3DSA:3.40.50.2300 41 285 9.6E-73 T 12-10-2018 BEN31_10390 370569c65a7e99e43821df2a94c7f07e 320 Gene3D G3DSA:3.40.50.2300 134 297 9.6E-73 T 12-10-2018 BEN31_10390 370569c65a7e99e43821df2a94c7f07e 320 SUPERFAMILY SSF53822 27 268 3.14E-23 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 1 239 4.8E-85 T 12-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 ProSitePatterns PS01057 SAICAR synthetase signature 1. 87 101 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 236 33.266 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 ProSitePatterns PS01058 SAICAR synthetase signature 2. 174 182 - T 12-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 Pfam PF01259 SAICAR synthetase 8 232 5.9E-69 T 12-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 SUPERFAMILY SSF56104 4 238 3.11E-84 T 12-10-2018 BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 Gene3D G3DSA:3.30.200.20 8 233 3.7E-99 T 12-10-2018 BEN31_12650 757e30c3ca0d393af00741425a9f3084 240 Gene3D G3DSA:3.30.470.20 86 222 3.7E-99 T 12-10-2018 BEN31_17215 e9cefe3511437054fbfe00bf667dc4c7 342 Gene3D G3DSA:3.40.50.2000 156 281 2.2E-23 T 12-10-2018 BEN31_17215 e9cefe3511437054fbfe00bf667dc4c7 342 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 186 278 4.3E-6 T 12-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 BEN31_17215 e9cefe3511437054fbfe00bf667dc4c7 342 Gene3D G3DSA:3.40.50.11190 3 150 4.9E-6 T 12-10-2018 BEN31_17215 e9cefe3511437054fbfe00bf667dc4c7 342 SUPERFAMILY SSF53756 4 332 6.28E-14 T 12-10-2018 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Pfam PF03461 TRCF domain 1025 1117 4.5E-25 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SMART SM00982 1024 1124 1.6E-36 T 12-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Gene3D G3DSA:3.90.1150.50 1020 1177 1.8E-42 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SUPERFAMILY SSF143517 1011 1169 1.96E-36 T 12-10-2018 IPR037235 TRCF-like, C-terminal domain BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Pfam PF00271 Helicase conserved C-terminal domain 828 929 7.2E-17 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 42 1147 28.772 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SMART SM00487 620 810 2.2E-32 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SMART SM01058 499 596 1.3E-51 T 12-10-2018 IPR003711 CarD-like/TRCF domain BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Pfam PF02559 CarD-like/TRCF domain 500 595 1.1E-31 T 12-10-2018 IPR003711 CarD-like/TRCF domain BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SUPERFAMILY SSF52540 14 367 1.07E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SUPERFAMILY SSF52540 543 803 7.55E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Pfam PF00270 DEAD/DEAH box helicase 625 784 3.5E-16 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SUPERFAMILY SSF52540 802 1009 4.63E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Gene3D G3DSA:3.40.50.11180 35 325 2.1E-67 T 12-10-2018 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Gene3D G3DSA:3.40.50.300 562 801 3.3E-246 T 12-10-2018 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Gene3D G3DSA:2.30.30.840 503 561 3.3E-246 T 12-10-2018 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1098 0.0 T 12-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SUPERFAMILY SSF141259 491 568 1.31E-26 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SMART SM00490 846 930 3.3E-19 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 SUPERFAMILY SSF52540 377 490 7.7E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Gene3D G3DSA:3.30.2060.10 140 225 2.1E-67 T 12-10-2018 BEN31_15430 ea8bae1d80b982509aef60c6a3677f00 1177 Gene3D G3DSA:3.40.50.300 498 1008 3.3E-246 T 12-10-2018 BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 SUPERFAMILY SSF52540 6 243 2.16E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 Pfam PF08402 TOBE domain 281 356 1.6E-6 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 Gene3D G3DSA:2.40.50.100 240 361 1.2E-33 T 12-10-2018 BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 Gene3D G3DSA:3.40.50.300 1 239 3.0E-73 T 12-10-2018 BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 SUPERFAMILY SSF50331 237 364 2.38E-29 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 Pfam PF00005 ABC transporter 21 162 1.0E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 SMART SM00382 29 212 1.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_11065 99b7f1ac0fd132d3d4fa8f125b6bf9dd 368 Gene3D G3DSA:2.40.50.140 303 348 1.2E-33 T 12-10-2018 BEN31_17280 0d68cec95df6469b6197898a8afa93e8 386 SUPERFAMILY SSF103473 4 377 7.46E-59 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_17280 0d68cec95df6469b6197898a8afa93e8 386 Pfam PF07690 Major Facilitator Superfamily 12 327 3.0E-42 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_17280 0d68cec95df6469b6197898a8afa93e8 386 Gene3D G3DSA:1.20.1250.20 6 378 8.7E-47 T 12-10-2018 BEN31_09010 45a85f5c31e56375d9dd317ca1d91abc 325 Gene3D G3DSA:3.40.50.970 1 192 4.7E-80 T 12-10-2018 BEN31_09010 45a85f5c31e56375d9dd317ca1d91abc 325 Gene3D G3DSA:3.40.50.920 193 325 2.2E-47 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_09010 45a85f5c31e56375d9dd317ca1d91abc 325 SUPERFAMILY SSF52922 188 325 3.01E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_09010 45a85f5c31e56375d9dd317ca1d91abc 325 SMART SM00861 4 179 4.8E-63 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_09010 45a85f5c31e56375d9dd317ca1d91abc 325 SUPERFAMILY SSF52518 2 204 3.24E-66 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_09010 45a85f5c31e56375d9dd317ca1d91abc 325 Pfam PF02780 Transketolase, C-terminal domain 194 314 5.6E-39 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BEN31_09010 45a85f5c31e56375d9dd317ca1d91abc 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 4.6E-40 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Gene3D G3DSA:2.40.50.100 966 1029 6.9E-68 T 12-10-2018 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1192 18.731 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 385 6.4E-9 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 474 4.3E-29 T 12-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 8.8E-38 T 12-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Gene3D G3DSA:1.10.1790.20 950 1128 6.9E-68 T 12-10-2018 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1129 1.4E-67 T 12-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 1.4E-14 T 12-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Gene3D G3DSA:1.10.150.390 1130 1190 1.5E-28 T 12-10-2018 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Gene3D G3DSA:1.10.40.90 363 405 1.0E-23 T 12-10-2018 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 SUPERFAMILY SSF64484 5 1181 0.0 T 12-10-2018 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Gene3D G3DSA:1.10.274.100 479 659 2.9E-49 T 12-10-2018 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 12-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Gene3D G3DSA:1.10.132.30 660 794 3.1E-59 T 12-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 SMART SM00663 224 503 7.7E-185 T 12-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_15085 8aa1f7361ea8122c1cf5237713a171f8 1199 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 1.7E-89 T 12-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_02470 d0fc68fde76c318174f0dcf0ccb7c6aa 350 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 10 339 7.4E-37 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 Gene3D G3DSA:3.40.50.980 22 179 1.7E-50 T 12-10-2018 BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 522 1.2E-13 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 Gene3D G3DSA:3.40.50.980 182 355 1.4E-56 T 12-10-2018 BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 7 529 2.3E-235 T 12-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 SUPERFAMILY SSF56801 5 532 4.84E-135 T 12-10-2018 BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 Pfam PF00501 AMP-binding enzyme 32 437 9.3E-82 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 Gene3D G3DSA:2.30.38.10 356 431 8.5E-29 T 12-10-2018 BEN31_15980 71f32cd4c7c6d8e80545e888917d1c70 539 Gene3D G3DSA:3.30.300.310 433 537 1.4E-30 T 12-10-2018 BEN31_17545 e2d4b7695c58a53ef4515c16bba50233 294 Pfam PF05175 Methyltransferase small domain 113 203 9.9E-16 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BEN31_17545 e2d4b7695c58a53ef4515c16bba50233 294 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 7 289 2.4E-78 T 12-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 BEN31_17545 e2d4b7695c58a53ef4515c16bba50233 294 Gene3D G3DSA:1.10.8.10 7 88 5.9E-19 T 12-10-2018 BEN31_17545 e2d4b7695c58a53ef4515c16bba50233 294 Gene3D G3DSA:3.40.50.150 89 292 1.5E-59 T 12-10-2018 BEN31_17545 e2d4b7695c58a53ef4515c16bba50233 294 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 284 1.6E-81 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BEN31_17545 e2d4b7695c58a53ef4515c16bba50233 294 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 8 288 39.896 T 12-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 BEN31_17545 e2d4b7695c58a53ef4515c16bba50233 294 SUPERFAMILY SSF53335 7 285 1.82E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 211 800 4.1E-185 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 269 780 3.8E-92 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 1.3E-27 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 1.3E-27 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 1.3E-27 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 1.3E-27 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 1.3E-27 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 1.3E-27 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Gene3D G3DSA:2.70.150.20 289 401 5.8E-42 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Pfam PF00122 E1-E2 ATPase 297 477 5.3E-58 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 SUPERFAMILY SSF55008 3 71 3.8E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 5 68 4.7E-10 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 72 136 1.9E-11 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Pfam PF00403 Heavy-metal-associated domain 7 66 1.5E-14 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Pfam PF00403 Heavy-metal-associated domain 75 134 4.0E-13 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Gene3D G3DSA:3.30.70.100 72 138 2.4E-20 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Gene3D G3DSA:3.40.50.1000 479 749 2.2E-94 T 12-10-2018 IPR023214 HAD superfamily BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 192 212 7.0E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 212 237 7.0E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 4 29 7.0E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 SUPERFAMILY SSF81665 257 774 2.09E-13 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 SUPERFAMILY SSF81653 300 396 2.22E-28 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00943 Copper-transporting ATPase signature 116 136 1.2E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00943 Copper-transporting ATPase signature 266 285 1.2E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00943 Copper-transporting ATPase signature 481 496 1.2E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00943 Copper-transporting ATPase signature 214 233 1.2E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00943 Copper-transporting ATPase signature 419 433 1.2E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00943 Copper-transporting ATPase signature 674 691 1.2E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 PRINTS PR00943 Copper-transporting ATPase signature 286 304 1.2E-15 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 SUPERFAMILY SSF56784 496 797 1.26E-64 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 229 799 2.3E-198 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Gene3D G3DSA:3.40.1110.10 509 629 2.2E-94 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Gene3D G3DSA:3.30.70.100 2 71 1.8E-20 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 495 711 1.4E-47 T 12-10-2018 BEN31_01005 de93a01f359378cfc87013e0ac7907fb 811 SUPERFAMILY SSF55008 70 137 5.76E-20 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN31_13050 7975cd9cea2a68f4edebafd27d69bf7f 350 Pfam PF00296 Luciferase-like monooxygenase 8 305 1.9E-48 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BEN31_13050 7975cd9cea2a68f4edebafd27d69bf7f 350 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 5.9E-162 T 12-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative BEN31_13050 7975cd9cea2a68f4edebafd27d69bf7f 350 SUPERFAMILY SSF51679 1 340 7.77E-84 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_13050 7975cd9cea2a68f4edebafd27d69bf7f 350 Gene3D G3DSA:3.20.20.30 1 348 9.4E-94 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_09240 922246d4f57d1b02ea0cf9aaba4569e2 63 Pfam PF14156 Antirepressor AbbA 2 62 4.8E-34 T 12-10-2018 IPR025446 Antirepressor AbbA BEN31_09240 922246d4f57d1b02ea0cf9aaba4569e2 63 ProDom PD054279 YKZF 25 63 2.0E-12 T 12-10-2018 BEN31_14755 e5e29bd2a6d9070712cd6fdee5e0fc85 289 SUPERFAMILY SSF53697 94 279 1.05E-41 T 12-10-2018 BEN31_14755 e5e29bd2a6d9070712cd6fdee5e0fc85 289 SUPERFAMILY SSF46689 6 78 2.87E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_14755 e5e29bd2a6d9070712cd6fdee5e0fc85 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 76 5.1E-23 T 12-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 BEN31_14755 e5e29bd2a6d9070712cd6fdee5e0fc85 289 Gene3D G3DSA:1.10.10.10 1 83 3.9E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14755 e5e29bd2a6d9070712cd6fdee5e0fc85 289 Pfam PF01380 SIS domain 127 256 1.0E-24 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_14755 e5e29bd2a6d9070712cd6fdee5e0fc85 289 Gene3D G3DSA:3.40.50.10490 94 282 8.5E-48 T 12-10-2018 BEN31_18135 cbcd9ab7abb2eebe36579e5e78bb3b80 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 129 1.4E-8 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_18135 cbcd9ab7abb2eebe36579e5e78bb3b80 341 SUPERFAMILY SSF51735 139 295 6.48E-10 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_18135 cbcd9ab7abb2eebe36579e5e78bb3b80 341 Hamap MF_02069 Ribulose-5-phosphate reductase [tarJ]. 1 341 59.352 T 12-10-2018 IPR034710 Ribulose-5-phosphate reductase GO:0050256 KEGG: 00040+1.1.1.405|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7818 BEN31_18135 cbcd9ab7abb2eebe36579e5e78bb3b80 341 Pfam PF16912 Glucose dehydrogenase C-terminus 139 327 8.2E-10 T 12-10-2018 IPR031640 Glucose dehydrogenase, C-terminal KEGG: 00030+1.1.1.47 BEN31_18135 cbcd9ab7abb2eebe36579e5e78bb3b80 341 SUPERFAMILY SSF50129 18 173 3.96E-22 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_18135 cbcd9ab7abb2eebe36579e5e78bb3b80 341 Gene3D G3DSA:3.90.180.10 23 318 5.9E-36 T 12-10-2018 BEN31_18135 cbcd9ab7abb2eebe36579e5e78bb3b80 341 Gene3D G3DSA:3.40.50.720 162 279 5.9E-36 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 PIRSF PIRSF001604 1 668 7.4E-259 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Gene3D G3DSA:2.40.50.140 314 386 3.8E-29 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SMART SM00278 539 558 2.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SMART SM00278 475 494 2.2 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SMART SM00278 441 460 240.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SUPERFAMILY SSF47781 399 580 1.63E-65 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Gene3D G3DSA:3.30.470.90 73 313 4.1E-102 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 12-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 662 1.7E-276 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Hamap MF_01588 DNA ligase [ligA]. 4 666 53.773 T 12-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 593 662 2.3E-12 T 12-10-2018 IPR001357 BRCT domain BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SMART SM00532 5 443 2.1E-283 T 12-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Pfam PF14520 Helix-hairpin-helix domain 443 493 0.0016 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SUPERFAMILY SSF56091 2 312 3.7E-122 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 12-10-2018 IPR018239 NAD-dependent DNA ligase, active site BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 314 3.7E-131 T 12-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Gene3D G3DSA:1.10.150.20 427 499 1.2E-30 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SMART SM00292 592 668 2.5E-11 T 12-10-2018 IPR001357 BRCT domain BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 394 5.9E-33 T 12-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 403 429 4.1E-10 T 12-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Pfam PF12826 Helix-hairpin-helix motif 505 567 6.9E-24 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Gene3D G3DSA:1.10.150.20 500 579 3.1E-26 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SUPERFAMILY SSF52113 590 665 1.53E-18 T 12-10-2018 IPR036420 BRCT domain superfamily BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 SUPERFAMILY SSF50249 313 397 2.06E-26 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Gene3D G3DSA:2.20.70.80 387 424 3.4E-12 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Gene3D G3DSA:1.10.287.610 1 72 1.7E-26 T 12-10-2018 BEN31_12530 2e39e3921780a4d1407d5548e9631296 668 Gene3D G3DSA:3.40.50.10190 580 667 1.2E-25 T 12-10-2018 IPR036420 BRCT domain superfamily BEN31_02555 e526345a3a061297ccf712396f94729f 264 Gene3D G3DSA:1.10.3720.10 68 264 8.4E-24 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_02555 e526345a3a061297ccf712396f94729f 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 261 6.4E-26 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_02555 e526345a3a061297ccf712396f94729f 264 SUPERFAMILY SSF161098 68 259 9.81E-29 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.384 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 12-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 2.0E-17 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 SUPERFAMILY SSF110324 10 91 1.43E-32 T 12-10-2018 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 Gene3D G3DSA:2.40.50.100 28 93 3.1E-26 T 12-10-2018 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 PRINTS PR00063 Ribosomal protein L27 signature 12 36 5.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 PRINTS PR00063 Ribosomal protein L27 signature 62 86 5.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 PRINTS PR00063 Ribosomal protein L27 signature 37 61 5.1E-39 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 Pfam PF01016 Ribosomal L27 protein 10 89 3.6E-35 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03825 f3ce4b96658a0cb7b66eee5e385954e0 94 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 3.4E-41 T 12-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 PIRSF PIRSF000445 1 434 5.0E-156 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 2.6E-46 T 12-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 Gene3D G3DSA:3.40.50.720 161 313 4.3E-47 T 12-10-2018 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 419 5.7E-165 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 Gene3D G3DSA:3.30.460.30 1 158 9.6E-55 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 419 1.1E-19 T 12-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 12-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 SUPERFAMILY SSF51735 162 314 1.36E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 29.989 T 12-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 SUPERFAMILY SSF69075 318 419 6.67E-16 T 12-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 SUPERFAMILY SSF69742 1 158 8.37E-47 T 12-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 BEN31_03705 8dc2f708301e18d148f7388899b5ea07 455 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 4.5E-48 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BEN31_15195 bab2f3cbb4943eb3460eca527dba9954 363 ProSitePatterns PS00112 Phosphagen kinase active site signature. 167 173 - T 12-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 BEN31_15195 bab2f3cbb4943eb3460eca527dba9954 363 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 350 40.52 T 12-10-2018 IPR023660 Protein arginine kinase GO:0016775 BEN31_15195 bab2f3cbb4943eb3460eca527dba9954 363 SUPERFAMILY SSF55931 3 268 3.36E-88 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BEN31_15195 bab2f3cbb4943eb3460eca527dba9954 363 Gene3D G3DSA:3.30.590.10 8 265 4.7E-74 T 12-10-2018 BEN31_15195 bab2f3cbb4943eb3460eca527dba9954 363 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 54 253 1.0E-74 T 12-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 Gene3D G3DSA:3.40.50.200 123 441 1.7E-99 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 382 392 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 Pfam PF00082 Subtilase family 146 421 1.3E-53 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 151 161 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 SUPERFAMILY SSF52743 128 440 1.57E-80 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 Gene3D G3DSA:3.30.70.80 48 122 1.9E-8 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 2.3E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 381 397 2.3E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_07710 accfc6f941d4e124aab4678c1f104fd2 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 2.3E-18 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_09645 1fa427751e515b39c80e67416c25731d 228 Gene3D G3DSA:1.10.10.10 126 228 1.9E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09645 1fa427751e515b39c80e67416c25731d 228 SUPERFAMILY SSF52172 1 179 2.34E-41 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_09645 1fa427751e515b39c80e67416c25731d 228 Pfam PF00072 Response regulator receiver domain 6 116 6.6E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_09645 1fa427751e515b39c80e67416c25731d 228 SMART SM00448 4 115 8.0E-43 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_09645 1fa427751e515b39c80e67416c25731d 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 226 1.0E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_09645 1fa427751e515b39c80e67416c25731d 228 SMART SM00862 151 226 1.4E-27 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_09645 1fa427751e515b39c80e67416c25731d 228 Gene3D G3DSA:3.40.50.2300 1 125 4.1E-39 T 12-10-2018 BEN31_07160 22e9ecaca24fa93ddd81231a783c195b 486 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 485 3.3E-182 T 12-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 BEN31_07160 22e9ecaca24fa93ddd81231a783c195b 486 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 3 485 73.764 T 12-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 BEN31_07160 22e9ecaca24fa93ddd81231a783c195b 486 Gene3D G3DSA:3.40.605.10 24 462 8.8E-158 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_07160 22e9ecaca24fa93ddd81231a783c195b 486 Pfam PF00171 Aldehyde dehydrogenase family 17 481 1.8E-154 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_07160 22e9ecaca24fa93ddd81231a783c195b 486 Gene3D G3DSA:3.40.309.10 254 454 8.8E-158 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_07160 22e9ecaca24fa93ddd81231a783c195b 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN31_07160 22e9ecaca24fa93ddd81231a783c195b 486 SUPERFAMILY SSF53720 5 485 5.89E-153 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 1.3E-92 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 1.0E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 1.0E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 1.0E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 1.0E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 1.0E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 1.0E-64 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 3.3E-25 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 3.3E-25 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 3.3E-25 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 3.3E-25 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 3.3E-25 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 3.3E-25 T 12-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 Pfam PF00813 FliP family 25 217 8.7E-81 T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08125 ba5522647cd2967f4a88288fc8bde6ba 221 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 12-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 SUPERFAMILY SSF48029 118 329 8.24E-71 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 38 64 1.3E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 1.3E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 1.3E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 1.3E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 1.3E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 9 25 1.3E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 1.3E-79 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 Gene3D G3DSA:1.10.220.30 107 198 1.8E-34 T 12-10-2018 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 Pfam PF14841 FliG middle domain 119 193 2.5E-31 T 12-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 338 2.2E-161 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 Pfam PF01706 FliG C-terminal domain 222 328 3.4E-43 T 12-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 Gene3D G3DSA:1.10.220.30 2 86 1.3E-18 T 12-10-2018 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 Pfam PF14842 FliG N-terminal domain 9 111 4.1E-36 T 12-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 PIRSF PIRSF003161 3 338 1.5E-126 T 12-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 SUPERFAMILY SSF48029 10 104 4.71E-20 T 12-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical BEN31_08195 d2ee94b16072e27c9be7a1907c6db51b 338 Gene3D G3DSA:1.10.220.30 199 338 8.9E-51 T 12-10-2018 BEN31_08380 5052cc4058e9d06fb8d21827be4d517c 557 SUPERFAMILY SSF101473 4 201 4.05E-45 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BEN31_08380 5052cc4058e9d06fb8d21827be4d517c 557 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 557 7.3E-213 T 12-10-2018 IPR019986 DAK2 domain-containing protein YloV BEN31_08380 5052cc4058e9d06fb8d21827be4d517c 557 SMART SM01121 240 557 3.9E-187 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain BEN31_08380 5052cc4058e9d06fb8d21827be4d517c 557 SMART SM01120 36 201 2.6E-70 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BEN31_08380 5052cc4058e9d06fb8d21827be4d517c 557 Gene3D G3DSA:1.25.40.340 8 179 9.1E-12 T 12-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BEN31_08380 5052cc4058e9d06fb8d21827be4d517c 557 Pfam PF13684 Dihydroxyacetone kinase family 240 557 9.6E-126 T 12-10-2018 IPR033470 Uncharacterised protein, DhaK domain BEN31_08380 5052cc4058e9d06fb8d21827be4d517c 557 Pfam PF02734 DAK2 domain 36 200 7.6E-42 T 12-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 Gene3D G3DSA:1.10.8.410 225 273 5.0E-29 T 12-10-2018 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 SUPERFAMILY SSF64518 1 273 2.75E-91 T 12-10-2018 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 PRINTS PR00207 Flagellin signature 110 133 2.0E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 PRINTS PR00207 Flagellin signature 74 93 2.0E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 PRINTS PR00207 Flagellin signature 35 52 2.0E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 Gene3D G3DSA:1.20.1330.10 42 173 2.1E-54 T 12-10-2018 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 Pfam PF00700 Bacterial flagellin C-terminal helical region 188 272 2.9E-32 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.2E-44 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_09940 e0fe85ff39292e49a1468f24a29548fd 273 Gene3D G3DSA:1.20.1330.10 187 224 2.4E-15 T 12-10-2018 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 Gene3D G3DSA:3.50.50.60 7 304 6.4E-120 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.8E-16 T 12-10-2018 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.8E-16 T 12-10-2018 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 2.8E-16 T 12-10-2018 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 Hamap MF_01685 Ferredoxin--NADP reductase. 7 328 44.328 T 12-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 SUPERFAMILY SSF51905 8 314 5.67E-40 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 1.3E-25 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.3E-25 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 1.3E-25 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 1.3E-25 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 1.3E-25 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 1.3E-25 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 293 3.9E-30 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_01610 d7ce55e2dae2fadf079ffdcf4e09dcf5 332 Gene3D G3DSA:3.50.50.60 128 246 6.4E-120 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_15915 a9d202386e4b19071a5eb5232c5053eb 284 Pfam PF11738 Protein of unknown function (DUF3298) 190 271 6.1E-20 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 BEN31_15915 a9d202386e4b19071a5eb5232c5053eb 284 Pfam PF13739 Domain of unknown function (DUF4163) 85 158 5.2E-8 T 12-10-2018 IPR025303 Deacetylase PdaC BEN31_15915 a9d202386e4b19071a5eb5232c5053eb 284 Gene3D G3DSA:3.90.640.20 186 284 3.4E-43 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily BEN31_15915 a9d202386e4b19071a5eb5232c5053eb 284 Gene3D G3DSA:3.30.565.40 75 185 1.1E-31 T 12-10-2018 BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 Pfam PF00072 Response regulator receiver domain 5 112 5.9E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 SUPERFAMILY SSF52172 2 129 2.99E-39 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.3E-23 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 SMART SM00448 3 112 3.3E-45 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 SUPERFAMILY SSF46894 127 228 2.13E-24 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 SMART SM00862 151 228 9.9E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 Gene3D G3DSA:3.40.50.2300 2 129 2.3E-36 T 12-10-2018 BEN31_01415 40de3bb836717f897aaaf9413fdadd24 231 Gene3D G3DSA:1.10.10.10 130 231 3.3E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 4.7E-22 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 SUPERFAMILY SSF55315 2 78 7.85E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 Pfam PF00588 SpoU rRNA Methylase family 98 238 4.4E-40 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 244 1.9E-92 T 12-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 Gene3D G3DSA:3.30.1330.30 1 76 2.2E-14 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 SMART SM00967 7 81 6.5E-20 T 12-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 Gene3D G3DSA:3.40.1280.10 77 245 9.8E-58 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN31_15140 a0b5283f61fe501deb91c67b6e4b403e 249 SUPERFAMILY SSF75217 69 245 3.53E-49 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN31_15010 f3527853780abeced6befc2565a4e57a 144 SUPERFAMILY SSF54686 1 137 1.7E-59 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.632 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 Gene3D G3DSA:3.90.1170.10 1 143 6.8E-56 T 12-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.6E-53 T 12-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 8.4E-41 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.8E-64 T 12-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15010 f3527853780abeced6befc2565a4e57a 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 12-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_06950 cd9ea6466ca5d18848b425895db628ac 447 PIRSF PIRSF000139 5 441 5.4E-141 T 12-10-2018 BEN31_06950 cd9ea6466ca5d18848b425895db628ac 447 Pfam PF13183 4Fe-4S dicluster domain 22 91 1.1E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN31_06950 cd9ea6466ca5d18848b425895db628ac 447 Gene3D G3DSA:1.10.1060.10 1 112 3.8E-9 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_06950 cd9ea6466ca5d18848b425895db628ac 447 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 77 88 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN31_06950 cd9ea6466ca5d18848b425895db628ac 447 SUPERFAMILY SSF46548 19 106 9.77E-19 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_06950 cd9ea6466ca5d18848b425895db628ac 447 Pfam PF02754 Cysteine-rich domain 195 277 3.8E-19 T 12-10-2018 IPR004017 Cysteine-rich domain BEN31_06950 cd9ea6466ca5d18848b425895db628ac 447 Pfam PF02754 Cysteine-rich domain 326 410 8.0E-15 T 12-10-2018 IPR004017 Cysteine-rich domain BEN31_08355 97399feb18227a5ddf017be80a745bcd 332 PIRSF PIRSF002465 1 332 9.1E-132 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BEN31_08355 97399feb18227a5ddf017be80a745bcd 332 Pfam PF02504 Fatty acid synthesis protein 1 317 5.1E-129 T 12-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 BEN31_08355 97399feb18227a5ddf017be80a745bcd 332 SUPERFAMILY SSF53659 1 327 4.11E-106 T 12-10-2018 BEN31_08355 97399feb18227a5ddf017be80a745bcd 332 Gene3D G3DSA:3.40.718.10 1 332 1.3E-142 T 12-10-2018 BEN31_08355 97399feb18227a5ddf017be80a745bcd 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 152.586 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BEN31_08355 97399feb18227a5ddf017be80a745bcd 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 328 1.8E-139 T 12-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 533 545 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 Gene3D G3DSA:2.70.70.10 460 616 6.0E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 Pfam PF00367 phosphotransferase system, EIIB 8 41 2.1E-13 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 SUPERFAMILY SSF55604 6 79 1.22E-18 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 SUPERFAMILY SSF51261 468 614 5.41E-52 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 Gene3D G3DSA:3.30.1360.60 1 76 1.7E-22 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 473 591 2.5E-43 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 470 595 7.1E-49 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 Pfam PF02378 Phosphotransferase system, EIIC 111 379 1.4E-27 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_16295 93a462046ddb0357534ffb6a9a1b5b26 619 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 614 9.5E-220 T 12-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 BEN31_16275 59f9613e05cdc0975539579213f5f876 207 SUPERFAMILY SSF55811 26 196 6.5E-31 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN31_16275 59f9613e05cdc0975539579213f5f876 207 Gene3D G3DSA:3.90.79.10 2 202 5.7E-53 T 12-10-2018 BEN31_16275 59f9613e05cdc0975539579213f5f876 207 ProSitePatterns PS00893 Nudix box signature. 62 83 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN31_16275 59f9613e05cdc0975539579213f5f876 207 Pfam PF00293 NUDIX domain 25 138 1.3E-14 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN31_00320 fe74a20643bd4b305e838edabd706d9e 463 Pfam PF06605 Prophage endopeptidase tail 29 327 2.2E-43 T 12-10-2018 IPR010572 Prophage tail endopeptidase BEN31_00320 fe74a20643bd4b305e838edabd706d9e 463 Gene3D G3DSA:3.55.50.40 88 173 4.1E-6 T 12-10-2018 BEN31_00320 fe74a20643bd4b305e838edabd706d9e 463 Gene3D G3DSA:2.40.10.280 2 81 7.3E-9 T 12-10-2018 BEN31_03390 c8b3ba0bc19459ef6fa70109400c20dc 362 SUPERFAMILY SSF53187 7 358 1.76E-74 T 12-10-2018 BEN31_03390 c8b3ba0bc19459ef6fa70109400c20dc 362 PIRSF PIRSF001123 4 361 2.7E-148 T 12-10-2018 IPR008007 Peptidase M42 BEN31_03390 c8b3ba0bc19459ef6fa70109400c20dc 362 Gene3D G3DSA:2.40.30.40 77 164 7.1E-137 T 12-10-2018 IPR023367 Peptidase M42, domain 2 BEN31_03390 c8b3ba0bc19459ef6fa70109400c20dc 362 Gene3D G3DSA:3.40.630.10 12 345 7.1E-137 T 12-10-2018 BEN31_03390 c8b3ba0bc19459ef6fa70109400c20dc 362 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 7.9E-118 T 12-10-2018 IPR008007 Peptidase M42 BEN31_03390 c8b3ba0bc19459ef6fa70109400c20dc 362 SUPERFAMILY SSF101821 73 182 4.43E-33 T 12-10-2018 BEN31_16230 8da74694720ffc7e4b9f4162d80fe5a5 179 PIRSF PIRSF015278 1 177 3.5E-40 T 12-10-2018 IPR016630 Uncharacterised conserved protein UCP015278 BEN31_16230 8da74694720ffc7e4b9f4162d80fe5a5 179 Pfam PF10004 Uncharacterized protein conserved in bacteria (DUF2247) 8 171 6.6E-42 T 12-10-2018 IPR016630 Uncharacterised conserved protein UCP015278 BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 Pfam PF12538 DNA transporter 3 119 6.2E-31 T 12-10-2018 IPR022206 Firmicutes EssC, N-terminal BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 SUPERFAMILY SSF52540 988 1172 5.73E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 Pfam PF01580 FtsK/SpoIIIE family 1257 1323 5.9E-6 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 Pfam PF01580 FtsK/SpoIIIE family 646 853 1.8E-30 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 Pfam PF01580 FtsK/SpoIIIE family 986 1159 2.8E-23 T 12-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 Gene3D G3DSA:3.40.50.300 617 950 6.1E-78 T 12-10-2018 BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 SUPERFAMILY SSF52540 1246 1419 1.01E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 SUPERFAMILY SSF52540 639 894 1.44E-30 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 206 1481 0.0 T 12-10-2018 IPR023839 Firmicutes EssC, C-terminal BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 Gene3D G3DSA:3.40.50.300 956 1243 1.1E-63 T 12-10-2018 BEN31_01680 8260f54a763745e0670f7ece1f4a4238 1491 Gene3D G3DSA:3.40.50.300 1250 1483 3.0E-25 T 12-10-2018 BEN31_11845 4aff28948f593890e1d20281b2ec1dbf 114 Gene3D G3DSA:1.10.3730.20 2 107 2.3E-19 T 12-10-2018 BEN31_11845 4aff28948f593890e1d20281b2ec1dbf 114 Pfam PF00893 Small Multidrug Resistance protein 4 91 4.2E-17 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BEN31_11845 4aff28948f593890e1d20281b2ec1dbf 114 SUPERFAMILY SSF103481 8 103 2.09E-11 T 12-10-2018 BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 SUPERFAMILY SSF46785 9 142 3.93E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 Gene3D G3DSA:1.10.10.10 1 141 4.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 4.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 4.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 4.3E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 Pfam PF01047 MarR family 36 93 7.3E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09465 661d3afa0f4cfaeb5b442214cd43f55f 151 SMART SM00347 29 129 6.1E-27 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_16115 0531ea2b387944f5fa4969596441ac7a 286 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 271 2.3E-73 T 12-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase BEN31_16115 0531ea2b387944f5fa4969596441ac7a 286 PIRSF PIRSF006779 1 278 7.4E-96 T 12-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase BEN31_16115 0531ea2b387944f5fa4969596441ac7a 286 Gene3D G3DSA:3.40.50.10790 1 166 3.9E-50 T 12-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal BEN31_16115 0531ea2b387944f5fa4969596441ac7a 286 SUPERFAMILY SSF101852 171 276 2.09E-29 T 12-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal BEN31_16115 0531ea2b387944f5fa4969596441ac7a 286 Gene3D G3DSA:2.40.30.90 167 283 2.4E-34 T 12-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal BEN31_16115 0531ea2b387944f5fa4969596441ac7a 286 SUPERFAMILY SSF102522 5 167 8.76E-55 T 12-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 56 8.3E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 Gene3D G3DSA:1.10.260.40 7 66 2.4E-19 T 12-10-2018 BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 SUPERFAMILY SSF53822 66 325 1.88E-58 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 SMART SM00354 8 79 1.0E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 Pfam PF13377 Periplasmic binding protein-like domain 177 335 7.9E-27 T 12-10-2018 BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 Gene3D G3DSA:3.40.50.2300 71 318 2.4E-70 T 12-10-2018 BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 12-10-2018 BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 SUPERFAMILY SSF47413 8 67 4.69E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_18015 51228a9365c6aced0088acddcb2809aa 336 Gene3D G3DSA:3.40.50.2300 166 297 2.4E-70 T 12-10-2018 BEN31_07175 e64e21fcf4d4bdc569739c9437716be8 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 3.0E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_07175 e64e21fcf4d4bdc569739c9437716be8 235 Gene3D G3DSA:1.10.10.10 132 235 9.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07175 e64e21fcf4d4bdc569739c9437716be8 235 Gene3D G3DSA:3.40.50.2300 2 131 2.8E-34 T 12-10-2018 BEN31_07175 e64e21fcf4d4bdc569739c9437716be8 235 Pfam PF00072 Response regulator receiver domain 8 117 5.3E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_07175 e64e21fcf4d4bdc569739c9437716be8 235 SMART SM00862 154 230 2.1E-25 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_07175 e64e21fcf4d4bdc569739c9437716be8 235 SMART SM00448 6 117 1.9E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_07175 e64e21fcf4d4bdc569739c9437716be8 235 SUPERFAMILY SSF52172 7 188 1.57E-37 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_10290 cbf594410d0ee2e1e93255f8d72ea56f 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 39.417 T 12-10-2018 IPR023731 Regulatory protein Spx GO:0045892 BEN31_10290 cbf594410d0ee2e1e93255f8d72ea56f 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 6.5E-38 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BEN31_10290 cbf594410d0ee2e1e93255f8d72ea56f 131 SUPERFAMILY SSF52833 1 128 5.77E-41 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_10290 cbf594410d0ee2e1e93255f8d72ea56f 131 Gene3D G3DSA:3.40.30.10 1 131 5.5E-48 T 12-10-2018 BEN31_10290 cbf594410d0ee2e1e93255f8d72ea56f 131 Pfam PF03960 ArsC family 5 113 5.5E-24 T 12-10-2018 IPR006660 Arsenate reductase-like BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 SUPERFAMILY SSF58104 252 580 3.79E-60 T 12-10-2018 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 SMART SM01049 39 139 3.2E-7 T 12-10-2018 IPR033480 Single Cache domain 2 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 Pfam PF00672 HAMP domain 229 273 8.1E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 SMART SM00283 306 567 3.0E-50 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 SMART SM00304 225 277 2.5E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 Gene3D G3DSA:1.10.8.500 229 275 7.4E-7 T 12-10-2018 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 353 526 2.8E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 Pfam PF17200 Single Cache domain 2 42 202 5.0E-38 T 12-10-2018 IPR033480 Single Cache domain 2 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 Gene3D G3DSA:3.30.450.20 38 202 8.2E-16 T 12-10-2018 BEN31_13685 f70ac1c6fe92125fc26084cfe7a339aa 582 Gene3D G3DSA:1.10.287.950 276 581 1.6E-57 T 12-10-2018 BEN31_13850 14bad0163b4ab8c8d245b5876e04e4bd 304 SUPERFAMILY SSF103481 47 143 6.8E-15 T 12-10-2018 BEN31_13850 14bad0163b4ab8c8d245b5876e04e4bd 304 Pfam PF00892 EamA-like transporter family 8 142 2.3E-26 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_13850 14bad0163b4ab8c8d245b5876e04e4bd 304 Pfam PF00892 EamA-like transporter family 154 294 3.3E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_13850 14bad0163b4ab8c8d245b5876e04e4bd 304 SUPERFAMILY SSF103481 216 296 2.35E-11 T 12-10-2018 BEN31_11590 52168e2d7b28105b20df590ba1ff8186 431 Gene3D G3DSA:3.90.1150.10 9 423 9.2E-169 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_11590 52168e2d7b28105b20df590ba1ff8186 431 Gene3D G3DSA:3.40.640.10 72 320 9.2E-169 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_11590 52168e2d7b28105b20df590ba1ff8186 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 2.0E-168 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BEN31_11590 52168e2d7b28105b20df590ba1ff8186 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 92.526 T 12-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 BEN31_11590 52168e2d7b28105b20df590ba1ff8186 431 SUPERFAMILY SSF53383 2 428 4.81E-123 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_11590 52168e2d7b28105b20df590ba1ff8186 431 Pfam PF00202 Aminotransferase class-III 36 399 9.6E-71 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_11590 52168e2d7b28105b20df590ba1ff8186 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_09435 fbe43bb22c6445ed5f6303c5f59cfedc 146 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 17 138 1.3E-27 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BEN31_09435 fbe43bb22c6445ed5f6303c5f59cfedc 146 SUPERFAMILY SSF55620 12 139 3.89E-31 T 12-10-2018 BEN31_09435 fbe43bb22c6445ed5f6303c5f59cfedc 146 Gene3D G3DSA:3.30.479.10 13 140 8.5E-28 T 12-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 BEN31_09435 fbe43bb22c6445ed5f6303c5f59cfedc 146 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 16 110 1.2E-27 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BEN31_09435 fbe43bb22c6445ed5f6303c5f59cfedc 146 PIRSF PIRSF006113 13 140 3.1E-19 T 12-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 BEN31_16335 428429d88fda62cffbc763a407de6e0c 215 Gene3D G3DSA:1.10.357.10 1 204 5.2E-60 T 12-10-2018 BEN31_16335 428429d88fda62cffbc763a407de6e0c 215 SUPERFAMILY SSF48498 88 186 4.67E-6 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_16335 428429d88fda62cffbc763a407de6e0c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 3.8E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_16335 428429d88fda62cffbc763a407de6e0c 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_16335 428429d88fda62cffbc763a407de6e0c 215 SUPERFAMILY SSF46689 5 66 1.8E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_16335 428429d88fda62cffbc763a407de6e0c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.8E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_16335 428429d88fda62cffbc763a407de6e0c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.8E-12 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 Gene3D G3DSA:3.90.1720.10 150 277 2.4E-32 T 12-10-2018 BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 SUPERFAMILY SSF54106 26 70 1.44E-9 T 12-10-2018 BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 SMART SM00257 95 138 4.3E-17 T 12-10-2018 IPR018392 LysM domain BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 SMART SM00257 27 70 9.8E-14 T 12-10-2018 IPR018392 LysM domain BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 12-10-2018 IPR010916 TonB box, conserved site BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 Gene3D G3DSA:3.10.350.10 91 146 1.0E-18 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 Gene3D G3DSA:3.10.350.10 24 77 1.8E-15 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 Pfam PF00877 NlpC/P60 family 173 272 6.0E-28 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 SUPERFAMILY SSF54001 153 275 2.7E-34 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 Pfam PF01476 LysM domain 96 137 2.0E-13 T 12-10-2018 IPR018392 LysM domain BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 Pfam PF01476 LysM domain 29 69 3.1E-13 T 12-10-2018 IPR018392 LysM domain BEN31_11170 6ffb3723bef03bd83f8f765af31ff01c 277 SUPERFAMILY SSF54106 95 137 6.54E-11 T 12-10-2018 BEN31_12005 4e7a9ef5cf60ff35486791d3dd94b83a 355 Pfam PF01699 Sodium/calcium exchanger protein 27 178 4.4E-21 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BEN31_12005 4e7a9ef5cf60ff35486791d3dd94b83a 355 Pfam PF01699 Sodium/calcium exchanger protein 210 350 3.6E-20 T 12-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 BEN31_12005 4e7a9ef5cf60ff35486791d3dd94b83a 355 Gene3D G3DSA:1.20.1420.30 57 345 9.4E-25 T 12-10-2018 BEN31_12005 4e7a9ef5cf60ff35486791d3dd94b83a 355 Gene3D G3DSA:1.20.58.1130 39 242 9.4E-25 T 12-10-2018 BEN31_12005 4e7a9ef5cf60ff35486791d3dd94b83a 355 TIGRFAM TIGR00378 cax: calcium/proton exchanger 11 353 2.0E-148 T 12-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 BEN31_12005 4e7a9ef5cf60ff35486791d3dd94b83a 355 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 5 353 2.4E-121 T 12-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 Gene3D G3DSA:1.10.10.60 250 296 3.4E-11 T 12-10-2018 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 Pfam PF12833 Helix-turn-helix domain 270 347 2.7E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 SUPERFAMILY SSF51215 97 232 1.05E-11 T 12-10-2018 IPR037923 Transcription regulator HTH-like BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 Pfam PF02311 AraC-like ligand binding domain 96 137 1.8E-4 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 331 7.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 331 347 7.0E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 SUPERFAMILY SSF46689 300 349 1.16E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 Gene3D G3DSA:2.60.120.10 89 156 3.3E-9 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 Gene3D G3DSA:1.10.10.60 297 350 1.0E-16 T 12-10-2018 BEN31_12770 8b459bb3a66ff488823e5602e3440788 351 SMART SM00342 264 347 5.0E-25 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Pfam PF10410 DnaB-helicase binding domain of primase 373 426 1.3E-9 T 12-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Gene3D G3DSA:3.90.980.10 114 245 6.6E-53 T 12-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Pfam PF13155 Toprim-like 267 352 2.5E-19 T 12-10-2018 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 PIRSF PIRSF002811 2 609 6.5E-200 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Gene3D G3DSA:3.40.1360.10 246 370 3.1E-38 T 12-10-2018 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 SUPERFAMILY SSF57783 4 99 2.55E-36 T 12-10-2018 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 SMART SM00400 36 90 1.0E-34 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Pfam PF01807 CHC2 zinc finger 6 99 1.3E-38 T 12-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Gene3D G3DSA:1.10.860.10 473 569 2.6E-30 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 SUPERFAMILY SSF56731 119 428 8.63E-103 T 12-10-2018 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Pfam PF08275 DNA primase catalytic core, N-terminal domain 130 256 3.5E-45 T 12-10-2018 IPR013264 DNA primase, catalytic core, N-terminal BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 SUPERFAMILY SSF48024 469 569 1.16E-9 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Gene3D G3DSA:3.90.580.10 1 101 1.4E-41 T 12-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 SMART SM00493 264 335 2.9E-17 T 12-10-2018 IPR006171 TOPRIM domain BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 TIGRFAM TIGR01391 dnaG: DNA primase 4 421 1.4E-150 T 12-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 BEN31_04695 b842b2f4d1ec0fee03b1c204402730a4 609 Hamap MF_00974 DNA primase [dnaG]. 4 599 30.032 T 12-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 SUPERFAMILY SSF48179 161 262 6.63E-18 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 96 3.6E-16 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 PIRSF PIRSF000193 1 266 1.7E-65 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 Gene3D G3DSA:1.10.3730.10 162 262 2.3E-15 T 12-10-2018 BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 Gene3D G3DSA:3.40.50.720 1 161 1.4E-26 T 12-10-2018 BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 SUPERFAMILY SSF51735 2 156 7.42E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 260 4.4E-17 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_04495 f974e046b1a4d1f86e7713ec943132c9 282 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Gene3D G3DSA:3.30.70.3290 447 852 4.7E-125 T 12-10-2018 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Pfam PF08659 KR domain 1124 1316 6.0E-51 T 12-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Gene3D G3DSA:3.40.47.10 6 433 3.4E-160 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SUPERFAMILY SSF55048 650 710 1.83E-5 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 256 4.1E-73 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 264 380 4.4E-42 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SUPERFAMILY SSF51735 1120 1330 6.56E-34 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Gene3D G3DSA:3.40.50.720 887 1376 2.0E-93 T 12-10-2018 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Pfam PF00698 Acyl transferase domain 519 818 1.3E-47 T 12-10-2018 IPR014043 Acyl transferase BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 521 820 6.8E-82 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SUPERFAMILY SSF52151 518 805 1.7E-64 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1124 1318 1.2E-40 T 12-10-2018 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SMART SM00825 Beta-ketoacyl synthase 9 433 3.0E-176 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Gene3D G3DSA:3.30.70.250 651 711 4.7E-125 T 12-10-2018 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SUPERFAMILY SSF51735 897 1104 9.84E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 169 185 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Gene3D G3DSA:1.10.1200.10 1387 1471 5.7E-11 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SMART SM00823 Phosphopantetheine attachment site 1399 1467 8.8E-5 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Pfam PF00550 Phosphopantetheine attachment site 1412 1462 2.0E-10 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Gene3D G3DSA:3.40.366.10 517 822 4.7E-125 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 383 494 8.8E-23 T 12-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SUPERFAMILY SSF53901 8 379 1.83E-83 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_12465 3f1da3bdc9bc05f3295603c78a4c88ba 1501 SUPERFAMILY SSF47336 1397 1463 7.85E-11 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_08320 b748f2d37531aa1e8f1164cf0de9d914 110 SUPERFAMILY SSF88659 3 102 9.53E-33 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_08320 b748f2d37531aa1e8f1164cf0de9d914 110 Hamap MF_00245 UPF0122 protein . 3 103 21.803 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like BEN31_08320 b748f2d37531aa1e8f1164cf0de9d914 110 Gene3D G3DSA:1.10.10.10 1 110 1.9E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08320 b748f2d37531aa1e8f1164cf0de9d914 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 99 1.8E-41 T 12-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like BEN31_03530 0a7499bd5bbc20bd37bd8b198e1045fd 376 Gene3D G3DSA:3.10.310.10 4 361 2.0E-133 T 12-10-2018 BEN31_03530 0a7499bd5bbc20bd37bd8b198e1045fd 376 SUPERFAMILY SSF54506 2 166 4.55E-60 T 12-10-2018 BEN31_03530 0a7499bd5bbc20bd37bd8b198e1045fd 376 SUPERFAMILY SSF54506 170 366 4.79E-52 T 12-10-2018 BEN31_03530 0a7499bd5bbc20bd37bd8b198e1045fd 376 Gene3D G3DSA:3.10.310.10 166 347 2.0E-133 T 12-10-2018 BEN31_03530 0a7499bd5bbc20bd37bd8b198e1045fd 376 Pfam PF04303 PrpF protein 1 363 1.2E-134 T 12-10-2018 IPR007400 PrpF protein BEN31_03630 37e78a6163c72132c474cedd95c689a9 304 Pfam PF01063 Amino-transferase class IV 35 261 1.5E-55 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BEN31_03630 37e78a6163c72132c474cedd95c689a9 304 Gene3D G3DSA:3.20.10.10 130 294 9.4E-56 T 12-10-2018 BEN31_03630 37e78a6163c72132c474cedd95c689a9 304 SUPERFAMILY SSF56752 6 290 1.83E-92 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BEN31_03630 37e78a6163c72132c474cedd95c689a9 304 ProSitePatterns PS00770 Aminotransferases class-IV signature. 188 217 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BEN31_03630 37e78a6163c72132c474cedd95c689a9 304 Gene3D G3DSA:3.30.470.10 4 129 2.8E-47 T 12-10-2018 BEN31_03630 37e78a6163c72132c474cedd95c689a9 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 290 1.7E-99 T 12-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 BEN31_06460 86c61c8161557c0587c49597648b0919 466 Pfam PF12544 Lysine-2,3-aminomutase 321 445 6.2E-61 T 12-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain BEN31_06460 86c61c8161557c0587c49597648b0919 466 Pfam PF04055 Radical SAM superfamily 130 276 1.7E-7 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_06460 86c61c8161557c0587c49597648b0919 466 PIRSF PIRSF004911 2 400 3.8E-163 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BEN31_06460 86c61c8161557c0587c49597648b0919 466 Gene3D G3DSA:3.20.20.70 63 348 3.1E-121 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_06460 86c61c8161557c0587c49597648b0919 466 Gene3D G3DSA:2.40.50.600 349 413 3.1E-19 T 12-10-2018 BEN31_06460 86c61c8161557c0587c49597648b0919 466 TIGRFAM TIGR00238 TIGR00238: KamA family protein 14 342 6.0E-150 T 12-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase BEN31_06460 86c61c8161557c0587c49597648b0919 466 SUPERFAMILY SSF102114 114 358 1.44E-34 T 12-10-2018 BEN31_06460 86c61c8161557c0587c49597648b0919 466 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 23 425 2.5E-194 T 12-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 BEN31_17405 43364adbd193e5e52911e96176f26c87 323 Gene3D G3DSA:3.50.30.60 161 320 1.3E-49 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_17405 43364adbd193e5e52911e96176f26c87 323 Gene3D G3DSA:3.40.50.10740 1 159 6.1E-55 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BEN31_17405 43364adbd193e5e52911e96176f26c87 323 SUPERFAMILY SSF52317 1 160 7.78E-44 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_17405 43364adbd193e5e52911e96176f26c87 323 SUPERFAMILY SSF141986 168 315 4.32E-34 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_17405 43364adbd193e5e52911e96176f26c87 323 Pfam PF02016 LD-carboxypeptidase 13 310 1.7E-70 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_17405 43364adbd193e5e52911e96176f26c87 323 PIRSF PIRSF028757 1 323 7.1E-79 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 Hamap MF_00550 Peptidase T [pepT]. 2 406 58.986 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 PIRSF PIRSF037215 1 410 1.6E-191 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 Pfam PF07687 Peptidase dimerisation domain 209 309 8.6E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 SUPERFAMILY SSF55031 211 322 1.15E-36 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 Gene3D G3DSA:3.30.70.360 211 321 2.7E-183 T 12-10-2018 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 Gene3D G3DSA:3.40.630.10 5 402 2.7E-183 T 12-10-2018 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 SUPERFAMILY SSF53187 3 406 6.79E-82 T 12-10-2018 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 6.8E-203 T 12-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 BEN31_16625 0467b8aad4b364cb27a0a37f54c396d2 410 Pfam PF01546 Peptidase family M20/M25/M40 141 403 5.0E-13 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_17170 3ddda93273ca413f595459b918990ba0 205 Gene3D G3DSA:2.60.120.10 2 170 2.6E-27 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_17170 3ddda93273ca413f595459b918990ba0 205 SMART SM00835 32 158 4.0E-17 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BEN31_17170 3ddda93273ca413f595459b918990ba0 205 SUPERFAMILY SSF51182 19 169 6.4E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_17170 3ddda93273ca413f595459b918990ba0 205 Pfam PF00190 Cupin 28 132 2.7E-12 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BEN31_15890 7dea8051e0f0935ac990bb9095cd5977 202 Gene3D G3DSA:3.40.50.1820 1 201 2.2E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_15890 7dea8051e0f0935ac990bb9095cd5977 202 Pfam PF01738 Dienelactone hydrolase family 89 186 2.1E-7 T 12-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 BEN31_15890 7dea8051e0f0935ac990bb9095cd5977 202 SUPERFAMILY SSF53474 2 201 8.11E-56 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 Pfam PF00375 Sodium:dicarboxylate symporter family 8 398 1.7E-112 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 35 50 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 Gene3D G3DSA:1.10.3860.10 1 417 1.6E-124 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 293 316 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 PRINTS PR00173 Glutamate-aspartate symporter signature 143 165 2.0E-36 T 12-10-2018 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 2.0E-36 T 12-10-2018 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 PRINTS PR00173 Glutamate-aspartate symporter signature 43 63 2.0E-36 T 12-10-2018 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 2.0E-36 T 12-10-2018 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 2.0E-36 T 12-10-2018 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 PRINTS PR00173 Glutamate-aspartate symporter signature 217 236 2.0E-36 T 12-10-2018 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 2.0E-36 T 12-10-2018 BEN31_13445 0e07ff4b3f82fac4db7d89956f1ea046 422 SUPERFAMILY SSF118215 8 400 2.75E-119 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 103 3.8E-36 T 12-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 SUPERFAMILY SSF55608 120 221 8.5E-19 T 12-10-2018 IPR027434 Homing endonuclease BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.731 T 12-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 2.2E-36 T 12-10-2018 IPR039518 WhiA, LAGLIDADG-like domain BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 2.6E-132 T 12-10-2018 IPR033981 Sporulation regulator WhiA-like BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 Pfam PF02650 WhiA C-terminal HTH domain 220 304 2.7E-35 T 12-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 Gene3D G3DSA:3.10.28.10 1 214 2.8E-66 T 12-10-2018 IPR027434 Homing endonuclease BEN31_18635 ce7cbd762302b7c43963927207bedfbf 316 Gene3D G3DSA:1.10.10.10 215 309 2.8E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16090 9f4de12d2ff7cac6a51d22c678361b8b 264 SUPERFAMILY SSF56281 1 243 8.65E-45 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_16090 9f4de12d2ff7cac6a51d22c678361b8b 264 Gene3D G3DSA:3.60.15.10 8 250 3.4E-41 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_16090 9f4de12d2ff7cac6a51d22c678361b8b 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 2.5E-28 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_16090 9f4de12d2ff7cac6a51d22c678361b8b 264 SMART SM00849 13 218 1.9E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_05010 71aadf9fee1d264f142dae379014d350 365 SUPERFAMILY SSF101790 274 363 2.45E-24 T 12-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal BEN31_05010 71aadf9fee1d264f142dae379014d350 365 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 258 3.0E-95 T 12-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain BEN31_05010 71aadf9fee1d264f142dae379014d350 365 Gene3D G3DSA:4.10.1250.10 238 280 4.4E-18 T 12-10-2018 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 363 2.9E-154 T 12-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 267 357 4.3E-26 T 12-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 Gene3D G3DSA:3.30.70.1400 51 137 3.7E-93 T 12-10-2018 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 PIRSF PIRSF006487 1 365 2.1E-108 T 12-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 Gene3D G3DSA:2.40.30.110 281 363 3.1E-30 T 12-10-2018 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 Gene3D G3DSA:3.30.1360.120 4 236 3.7E-93 T 12-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 363 48.746 T 12-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 BEN31_05010 71aadf9fee1d264f142dae379014d350 365 SUPERFAMILY SSF103025 2 282 6.91E-101 T 12-10-2018 BEN31_06470 e2bd142b1db08887f3a27b28d718a9ab 74 Hamap MF_01538 UPF0346 protein . 1 70 21.723 T 12-10-2018 IPR010673 Protein of unknown function UPF0346 BEN31_06470 e2bd142b1db08887f3a27b28d718a9ab 74 SUPERFAMILY SSF140652 2 72 1.06E-29 T 12-10-2018 IPR036806 YozE SAM-like superfamily BEN31_06470 e2bd142b1db08887f3a27b28d718a9ab 74 PIRSF PIRSF037262 1 72 5.5E-35 T 12-10-2018 IPR010673 Protein of unknown function UPF0346 BEN31_06470 e2bd142b1db08887f3a27b28d718a9ab 74 Gene3D G3DSA:1.10.150.260 1 72 2.9E-28 T 12-10-2018 IPR036806 YozE SAM-like superfamily BEN31_06470 e2bd142b1db08887f3a27b28d718a9ab 74 Pfam PF06855 YozE SAM-like fold 3 68 1.8E-27 T 12-10-2018 IPR023089 YozE SAM-like domain BEN31_06865 32496abb1e8ab9da42af3e033c5d4588 326 SUPERFAMILY SSF51126 31 322 9.61E-84 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_06865 32496abb1e8ab9da42af3e033c5d4588 326 ProSitePatterns PS00800 Pectinesterase signature 1. 59 78 - T 12-10-2018 IPR018040 Pectinesterase, Tyr active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 BEN31_06865 32496abb1e8ab9da42af3e033c5d4588 326 Gene3D G3DSA:2.160.20.10 28 326 4.1E-110 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_06865 32496abb1e8ab9da42af3e033c5d4588 326 ProSitePatterns PS00503 Pectinesterase signature 2. 179 188 - T 12-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 BEN31_06865 32496abb1e8ab9da42af3e033c5d4588 326 Pfam PF01095 Pectinesterase 36 317 6.2E-75 T 12-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 Gene3D G3DSA:1.10.10.60 1 50 1.4E-16 T 12-10-2018 BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 SUPERFAMILY SSF46689 4 78 3.11E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 Gene3D G3DSA:1.10.357.10 51 190 1.8E-17 T 12-10-2018 BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 SUPERFAMILY SSF48498 77 188 8.9E-12 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 4.1E-16 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 2.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_10870 7cc84756decfd06e7aaab435cdb8e58f 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 2.2E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07435 15230a90c965536ae91312c37856abfa 76 SUPERFAMILY SSF158221 1 42 1.03E-13 T 12-10-2018 BEN31_07435 15230a90c965536ae91312c37856abfa 76 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 7.2E-31 T 12-10-2018 IPR009242 Protein of unknown function DUF896 BEN31_07435 15230a90c965536ae91312c37856abfa 76 Hamap MF_01103 UPF0291 protein . 2 60 16.394 T 12-10-2018 IPR009242 Protein of unknown function DUF896 BEN31_07435 15230a90c965536ae91312c37856abfa 76 Gene3D G3DSA:1.10.287.540 1 56 6.3E-23 T 12-10-2018 BEN31_16460 f21db5cbc3e34c66068d75e4c6f74769 327 SUPERFAMILY SSF55347 125 289 2.29E-24 T 12-10-2018 BEN31_16460 f21db5cbc3e34c66068d75e4c6f74769 327 Gene3D G3DSA:3.30.360.10 134 326 1.0E-57 T 12-10-2018 BEN31_16460 f21db5cbc3e34c66068d75e4c6f74769 327 Gene3D G3DSA:3.40.50.720 1 133 1.8E-37 T 12-10-2018 BEN31_16460 f21db5cbc3e34c66068d75e4c6f74769 327 SUPERFAMILY SSF51735 2 151 1.39E-46 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_16460 f21db5cbc3e34c66068d75e4c6f74769 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 117 1.6E-28 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 7.5E-40 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 SUPERFAMILY SSF81271 384 456 2.62E-22 T 12-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 SMART SM00471 46 158 2.1E-8 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Gene3D G3DSA:3.30.70.260 657 736 4.5E-18 T 12-10-2018 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 SUPERFAMILY SSF81301 197 373 2.78E-67 T 12-10-2018 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Gene3D G3DSA:3.30.460.10 198 329 4.2E-54 T 12-10-2018 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 SUPERFAMILY SSF109604 12 196 2.51E-75 T 12-10-2018 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 SMART SM00954 240 350 2.1E-70 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 733 3.3E-258 T 12-10-2018 IPR004811 RelA/SpoT family GO:0015969 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Pfam PF13291 ACT domain 657 733 5.7E-21 T 12-10-2018 IPR002912 ACT domain BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 SUPERFAMILY SSF55021 659 735 3.41E-12 T 12-10-2018 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Gene3D G3DSA:1.10.3210.10 1 196 1.5E-87 T 12-10-2018 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Pfam PF02824 TGS domain 397 456 1.1E-22 T 12-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Gene3D G3DSA:3.10.20.30 390 462 8.2E-32 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BEN31_03980 a06a5fb1722907d4f2d2faef43ab2d87 736 Pfam PF13328 HD domain 31 180 9.8E-52 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_09560 652ca80793759b8fb7b58c5405c3368c 393 Pfam PF12791 Anti-sigma factor N-terminus 7 56 7.2E-14 T 12-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal BEN31_16125 0d08b48cb306242e94febf2133418d07 571 Pfam PF00005 ABC transporter 23 173 4.2E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16125 0d08b48cb306242e94febf2133418d07 571 Pfam PF00005 ABC transporter 319 465 2.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16125 0d08b48cb306242e94febf2133418d07 571 SMART SM00382 328 513 1.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16125 0d08b48cb306242e94febf2133418d07 571 SMART SM00382 32 224 7.9E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16125 0d08b48cb306242e94febf2133418d07 571 Pfam PF12558 ATP-binding cassette cobalt transporter 237 310 1.6E-19 T 12-10-2018 IPR022216 Putative ABC cobalt transporter BEN31_16125 0d08b48cb306242e94febf2133418d07 571 Gene3D G3DSA:3.40.50.300 3 256 9.5E-69 T 12-10-2018 BEN31_16125 0d08b48cb306242e94febf2133418d07 571 SUPERFAMILY SSF52540 4 237 6.39E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16125 0d08b48cb306242e94febf2133418d07 571 SUPERFAMILY SSF52540 294 527 3.99E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16125 0d08b48cb306242e94febf2133418d07 571 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16125 0d08b48cb306242e94febf2133418d07 571 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16125 0d08b48cb306242e94febf2133418d07 571 Gene3D G3DSA:3.40.50.300 299 550 1.3E-63 T 12-10-2018 BEN31_18340 0b40b3afb55214abb10293749429752a 561 Gene3D G3DSA:1.20.1480.50 162 257 4.2E-13 T 12-10-2018 BEN31_18340 0b40b3afb55214abb10293749429752a 561 Pfam PF00672 HAMP domain 203 253 1.7E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_18340 0b40b3afb55214abb10293749429752a 561 SMART SM00283 285 560 3.3E-66 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_18340 0b40b3afb55214abb10293749429752a 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 510 8.7E-45 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_18340 0b40b3afb55214abb10293749429752a 561 SMART SM00304 203 256 1.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_18340 0b40b3afb55214abb10293749429752a 561 Gene3D G3DSA:1.10.287.950 258 560 1.8E-65 T 12-10-2018 BEN31_18340 0b40b3afb55214abb10293749429752a 561 SUPERFAMILY SSF58104 228 559 3.53E-68 T 12-10-2018 BEN31_18340 0b40b3afb55214abb10293749429752a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 5.1E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_18340 0b40b3afb55214abb10293749429752a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 17 5.1E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_18340 0b40b3afb55214abb10293749429752a 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 5.1E-19 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 Gene3D G3DSA:1.10.1790.10 64 167 5.3E-37 T 12-10-2018 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 Gene3D G3DSA:1.10.1790.10 168 277 6.1E-38 T 12-10-2018 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 Pfam PF03123 CAT RNA binding domain 2 54 3.4E-23 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 SUPERFAMILY SSF63520 58 167 1.18E-31 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 SUPERFAMILY SSF63520 170 274 3.4E-28 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 SMART SM01061 1 59 1.1E-29 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 Pfam PF00874 PRD domain 181 272 5.8E-21 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 Pfam PF00874 PRD domain 75 162 3.0E-25 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 Gene3D G3DSA:2.30.24.10 1 55 1.0E-23 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_14460 3638e6f680a0f9f7aa691b8dc06ff7c8 278 SUPERFAMILY SSF50151 2 53 2.62E-17 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_14320 a97dcba664bf64918b524ec4564cc886 145 Gene3D G3DSA:1.10.10.10 2 142 1.8E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14320 a97dcba664bf64918b524ec4564cc886 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 4.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_14320 a97dcba664bf64918b524ec4564cc886 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 4.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_14320 a97dcba664bf64918b524ec4564cc886 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 4.8E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_14320 a97dcba664bf64918b524ec4564cc886 145 SUPERFAMILY SSF46785 5 139 1.6E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14320 a97dcba664bf64918b524ec4564cc886 145 Pfam PF01047 MarR family 35 92 3.4E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_14320 a97dcba664bf64918b524ec4564cc886 145 SMART SM00347 27 127 3.3E-24 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_05465 04056ef5d0099da6af3bb0115404d285 79 Pfam PF10827 Protein of unknown function (DUF2552) 2 79 7.0E-45 T 12-10-2018 IPR020157 Uncharacterised protein family YqkC BEN31_05465 04056ef5d0099da6af3bb0115404d285 79 ProDom PD058987 CYTOSOLIC YQKC 21 79 8.0E-15 T 12-10-2018 IPR020157 Uncharacterised protein family YqkC BEN31_09500 6388f763cd4aad32eabf14f629bb334a 396 Gene3D G3DSA:3.40.640.10 44 285 2.2E-119 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_09500 6388f763cd4aad32eabf14f629bb334a 396 SUPERFAMILY SSF53383 5 386 1.53E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_09500 6388f763cd4aad32eabf14f629bb334a 396 Pfam PF00155 Aminotransferase class I and II 33 383 9.5E-69 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_09500 6388f763cd4aad32eabf14f629bb334a 396 Gene3D G3DSA:3.90.1150.10 25 383 2.2E-119 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_01195 8a99005efc22cdd41ff1e8b929b6c8f4 428 Gene3D G3DSA:3.40.50.300 1 256 2.4E-68 T 12-10-2018 BEN31_01195 8a99005efc22cdd41ff1e8b929b6c8f4 428 Pfam PF00005 ABC transporter 18 167 3.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_01195 8a99005efc22cdd41ff1e8b929b6c8f4 428 SUPERFAMILY SSF52540 2 230 2.17E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01195 8a99005efc22cdd41ff1e8b929b6c8f4 428 SMART SM00382 26 215 2.4E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14415 916104c5ef2b33e7d9fbd3fb61624dc9 109 SUPERFAMILY SSF52794 2 98 1.55E-30 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_14415 916104c5ef2b33e7d9fbd3fb61624dc9 109 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 3.7E-25 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BEN31_14415 916104c5ef2b33e7d9fbd3fb61624dc9 109 Gene3D G3DSA:3.40.50.2300 1 104 9.0E-34 T 12-10-2018 BEN31_14415 916104c5ef2b33e7d9fbd3fb61624dc9 109 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 3.0E-16 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_15290 dfb43794cda0a0c2f081aa91f0e31627 333 SUPERFAMILY SSF51395 11 318 1.46E-90 T 12-10-2018 BEN31_15290 dfb43794cda0a0c2f081aa91f0e31627 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 321 2.2E-140 T 12-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 BEN31_15290 dfb43794cda0a0c2f081aa91f0e31627 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN31_15290 dfb43794cda0a0c2f081aa91f0e31627 333 Gene3D G3DSA:1.10.1200.80 254 330 4.4E-19 T 12-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 BEN31_15290 dfb43794cda0a0c2f081aa91f0e31627 333 Gene3D G3DSA:3.20.20.70 7 251 1.4E-81 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_15290 dfb43794cda0a0c2f081aa91f0e31627 333 PIRSF PIRSF006621 1 330 2.3E-107 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN31_15290 dfb43794cda0a0c2f081aa91f0e31627 333 Pfam PF01207 Dihydrouridine synthase (Dus) 14 319 1.6E-113 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN31_01770 1e6d0d82eebf5ac6d7206c58c203d75c 770 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 681 768 4.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01770 1e6d0d82eebf5ac6d7206c58c203d75c 770 SUPERFAMILY SSF50156 42 103 3.33E-6 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_01770 1e6d0d82eebf5ac6d7206c58c203d75c 770 SUPERFAMILY SSF55874 661 767 5.37E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01770 1e6d0d82eebf5ac6d7206c58c203d75c 770 Gene3D G3DSA:2.30.42.10 13 99 2.1E-6 T 12-10-2018 BEN31_01770 1e6d0d82eebf5ac6d7206c58c203d75c 770 Gene3D G3DSA:3.30.565.10 635 770 2.2E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01770 1e6d0d82eebf5ac6d7206c58c203d75c 770 Pfam PF07730 Histidine kinase 569 637 1.3E-11 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN31_01770 1e6d0d82eebf5ac6d7206c58c203d75c 770 SMART SM00387 677 770 5.1E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 SUPERFAMILY SSF51735 2 217 6.02E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 1.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 1.0E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 187 0.0066 T 12-10-2018 BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 Gene3D G3DSA:3.40.50.720 1 237 1.5E-42 T 12-10-2018 BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 Pfam PF00106 short chain dehydrogenase 3 195 1.2E-33 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04420 800cd32e1b1e6e09fb842130517aba55 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 9.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 Pfam PF00318 Ribosomal protein S2 9 223 4.0E-102 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 44.246 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 6.9E-114 T 12-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.3E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.3E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.3E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.3E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.3E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.3E-42 T 12-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 Gene3D G3DSA:1.10.287.610 97 152 2.5E-97 T 12-10-2018 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 Gene3D G3DSA:3.40.50.10490 10 214 2.5E-97 T 12-10-2018 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 SUPERFAMILY SSF52313 6 234 9.03E-102 T 12-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily BEN31_08055 eaaba3e74803cda11f23cfcfd449f61f 244 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 12-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 BEN31_05900 90232f9c04fd5445bd7274eb48477449 255 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 21 224 1.1E-76 T 12-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 BEN31_05020 4d645fdca5ced320c8617ab95cdedc8a 485 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 59.594 T 12-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 BEN31_05020 4d645fdca5ced320c8617ab95cdedc8a 485 Gene3D G3DSA:3.90.1150.10 339 470 4.0E-48 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_05020 4d645fdca5ced320c8617ab95cdedc8a 485 Pfam PF02347 Glycine cleavage system P-protein 45 299 2.6E-7 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BEN31_05020 4d645fdca5ced320c8617ab95cdedc8a 485 Gene3D G3DSA:3.40.640.10 86 313 2.0E-56 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_05020 4d645fdca5ced320c8617ab95cdedc8a 485 SUPERFAMILY SSF53383 12 482 4.13E-114 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_03395 baae0e7d0c28605d7e4bccdf0a78b6eb 598 Pfam PF02554 Carbon starvation protein CstA 1 371 4.3E-147 T 12-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 BEN31_03395 baae0e7d0c28605d7e4bccdf0a78b6eb 598 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 416 537 4.3E-29 T 12-10-2018 IPR025299 CstA, C-terminal domain BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 168 1.5E-54 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 SUPERFAMILY SSF51735 4 176 2.39E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 Gene3D G3DSA:3.40.50.720 1 179 6.0E-61 T 12-10-2018 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 SUPERFAMILY SSF48179 176 468 4.01E-132 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 4.1E-137 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 4.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 4.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 4.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 4.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 4.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 4.7E-88 T 12-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 PIRSF PIRSF000109 1 469 3.1E-245 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 7.9E-232 T 12-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 Gene3D G3DSA:1.20.5.320 436 469 2.0E-22 T 12-10-2018 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 12-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 Gene3D G3DSA:1.10.1040.10 180 435 2.0E-111 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_05325 7ad481fc66abc47fff8d111aeb8a4c3d 469 SMART SM01350 178 468 3.7E-230 T 12-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 BEN31_07015 78ce3aec2c67c20542611edba0209d0d 509 Gene3D G3DSA:3.90.226.10 245 508 1.4E-84 T 12-10-2018 BEN31_07015 78ce3aec2c67c20542611edba0209d0d 509 Gene3D G3DSA:3.90.226.10 2 244 1.4E-78 T 12-10-2018 BEN31_07015 78ce3aec2c67c20542611edba0209d0d 509 SUPERFAMILY SSF52096 5 247 2.28E-68 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_07015 78ce3aec2c67c20542611edba0209d0d 509 Pfam PF01039 Carboxyl transferase domain 26 506 1.0E-161 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BEN31_07015 78ce3aec2c67c20542611edba0209d0d 509 SUPERFAMILY SSF52096 211 489 6.4E-81 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_05395 0fafd31d5fae1b30fd8a9c2f0966d8ca 160 Pfam PF12867 DinB superfamily 15 151 3.4E-18 T 12-10-2018 IPR024775 DinB-like domain BEN31_05395 0fafd31d5fae1b30fd8a9c2f0966d8ca 160 Gene3D G3DSA:1.20.120.450 1 159 2.9E-37 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_05395 0fafd31d5fae1b30fd8a9c2f0966d8ca 160 SUPERFAMILY SSF109854 7 156 2.59E-30 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 Pfam PF00742 Homoserine dehydrogenase 137 315 7.2E-66 T 12-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 PIRSF PIRSF000098 1 430 9.6E-173 T 12-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 Pfam PF01842 ACT domain 351 416 2.0E-14 T 12-10-2018 IPR002912 ACT domain BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 8.2E-24 T 12-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 Gene3D G3DSA:3.40.50.720 4 336 3.9E-149 T 12-10-2018 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 SUPERFAMILY SSF55347 137 302 5.1E-53 T 12-10-2018 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 Gene3D G3DSA:3.30.70.260 344 418 3.9E-149 T 12-10-2018 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 SUPERFAMILY SSF55021 349 422 1.13E-12 T 12-10-2018 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 SUPERFAMILY SSF51735 2 158 1.53E-33 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 Gene3D G3DSA:3.30.360.10 136 343 3.9E-149 T 12-10-2018 BEN31_01540 10a3b96e6aa8a4fb8f8a9b2d6973ebef 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 12-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 BEN31_18545 19329a73b99eaa41221abadfe6f9732a 172 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 7.8E-11 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_18545 19329a73b99eaa41221abadfe6f9732a 172 Gene3D G3DSA:2.160.10.10 16 171 3.7E-29 T 12-10-2018 BEN31_18545 19329a73b99eaa41221abadfe6f9732a 172 SUPERFAMILY SSF51161 26 158 6.38E-33 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_18790 68c2b3e2aa778f1ce614fe91af357ddb 341 Pfam PF01446 Replication protein 104 340 1.1E-48 T 12-10-2018 IPR000989 Replication protein GO:0003677|GO:0005727|GO:0006260 BEN31_12295 f0dca73966c5f1515f3955a85d9f6892 323 SUPERFAMILY SSF51735 3 321 5.3E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12295 f0dca73966c5f1515f3955a85d9f6892 323 Gene3D G3DSA:3.90.25.10 184 323 1.3E-40 T 12-10-2018 BEN31_12295 f0dca73966c5f1515f3955a85d9f6892 323 Pfam PF16363 GDP-mannose 4,6 dehydratase 11 313 9.8E-58 T 12-10-2018 IPR016040 NAD(P)-binding domain BEN31_12295 f0dca73966c5f1515f3955a85d9f6892 323 Gene3D G3DSA:3.40.50.720 3 183 8.2E-52 T 12-10-2018 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 SUPERFAMILY SSF55021 21 101 1.57E-20 T 12-10-2018 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 17 299 47.144 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 Gene3D G3DSA:3.30.70.260 16 102 4.2E-28 T 12-10-2018 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 273 298 6.1E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 127 6.1E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 22 48 6.1E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 273 6.1E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 55 67 6.1E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 127 154 6.1E-63 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 SUPERFAMILY SSF53328 104 300 4.19E-60 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 21 299 2.7E-131 T 12-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 Pfam PF00551 Formyl transferase 104 281 6.9E-42 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 Pfam PF01842 ACT domain 22 80 2.4E-9 T 12-10-2018 IPR002912 ACT domain BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 Gene3D G3DSA:3.40.50.170 104 300 4.8E-72 T 12-10-2018 BEN31_09700 91c525fbe94e885b667adccff8a614e6 300 PIRSF PIRSF036480 17 300 3.1E-114 T 12-10-2018 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 1.3E-19 T 12-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 SUPERFAMILY SSF54782 220 308 9.94E-23 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 PIRSF PIRSF001438 1 310 2.2E-123 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 Gene3D G3DSA:3.40.190.10 4 209 3.8E-87 T 12-10-2018 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.5E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.5E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 2.5E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.5E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.5E-49 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 7.5E-113 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 Gene3D G3DSA:3.30.160.40 220 304 4.5E-28 T 12-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 Gene3D G3DSA:3.40.190.10 101 201 3.8E-87 T 12-10-2018 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.452 T 12-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 3.6E-82 T 12-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 12-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03715 af7ca7c64ea789dcfb8a97ccfc211138 311 SUPERFAMILY SSF53850 2 216 7.21E-84 T 12-10-2018 BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 SMART SM00851 14 107 7.5E-23 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 34.056 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 PIRSF PIRSF006614 1 138 2.1E-59 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 Gene3D G3DSA:3.40.50.1380 1 137 2.3E-55 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 62 - T 12-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 Pfam PF02142 MGS-like domain 15 107 2.3E-17 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 SUPERFAMILY SSF52335 1 130 1.83E-51 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN31_06040 9d9e8e10364e3e584580b924dff95aff 139 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 2 121 1.5E-59 T 12-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 BEN31_01065 125228c3425bac1be0ca900e45f54fcb 137 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 1 137 23.672 T 12-10-2018 IPR012187 Disulphide bond formation protein BdbC BEN31_01065 125228c3425bac1be0ca900e45f54fcb 137 PIRSF PIRSF036659 1 137 2.3E-54 T 12-10-2018 IPR012187 Disulphide bond formation protein BdbC BEN31_01065 125228c3425bac1be0ca900e45f54fcb 137 Gene3D G3DSA:1.20.1550.10 1 112 2.7E-9 T 12-10-2018 IPR023380 DsbB-like superfamily BEN31_01065 125228c3425bac1be0ca900e45f54fcb 137 SUPERFAMILY SSF158442 8 131 1.57E-29 T 12-10-2018 IPR023380 DsbB-like superfamily BEN31_01065 125228c3425bac1be0ca900e45f54fcb 137 Pfam PF02600 Disulfide bond formation protein DsbB 11 108 1.2E-7 T 12-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 67.318 T 12-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 Pfam PF00171 Aldehyde dehydrogenase family 50 511 6.1E-155 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 515 7.0E-273 T 12-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 Gene3D G3DSA:3.40.605.10 9 511 3.1E-191 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 Gene3D G3DSA:3.40.309.10 290 480 3.1E-191 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_14000 ee438c8f5668303bf4467bd7e7fc4dc2 515 SUPERFAMILY SSF53720 4 511 3.14E-157 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Gene3D G3DSA:3.40.1110.10 334 537 0.0 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 53 882 8.6E-216 T 12-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 SMART SM00831 2 76 3.0E-28 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 71 7.3E-19 T 12-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 SUPERFAMILY SSF56784 322 736 3.08E-64 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Pfam PF00689 Cation transporting ATPase, C-terminus 716 881 1.0E-51 T 12-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Gene3D G3DSA:3.40.50.1000 321 677 0.0 T 12-10-2018 IPR023214 HAD superfamily BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 455 473 4.7E-18 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 77 97 4.7E-18 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 317 338 4.7E-18 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00121 Sodium/potassium-transporting ATPase signature 244 266 4.7E-18 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 SUPERFAMILY SSF81653 114 224 1.16E-30 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 SUPERFAMILY SSF81665 1 881 1.57E-136 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Gene3D G3DSA:2.70.150.10 16 227 0.0 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 541 8.9E-41 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 8.9E-41 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 8.9E-41 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 8.9E-41 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 8.9E-41 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 8.9E-41 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 599 722 1.0E-37 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 220 346 2.4E-28 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 186 2.5E-20 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 427 576 8.3E-19 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 646 2.6E-25 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 Pfam PF00122 E1-E2 ATPase 111 304 2.6E-51 T 12-10-2018 BEN31_08475 3d611d1c4fb073720b4f33331a3f64f5 891 SUPERFAMILY SSF81660 332 534 1.46E-58 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN31_09125 a371c3c4d07ed27947615835d04cf627 368 Gene3D G3DSA:2.40.30.170 49 294 9.7E-42 T 12-10-2018 BEN31_09125 a371c3c4d07ed27947615835d04cf627 368 SUPERFAMILY SSF111369 70 228 5.23E-6 T 12-10-2018 BEN31_09125 a371c3c4d07ed27947615835d04cf627 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 250 9.2E-14 T 12-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain BEN31_09125 a371c3c4d07ed27947615835d04cf627 368 Gene3D G3DSA:2.40.420.20 45 352 9.7E-42 T 12-10-2018 BEN31_09125 a371c3c4d07ed27947615835d04cf627 368 Gene3D G3DSA:2.40.50.100 60 209 9.7E-42 T 12-10-2018 BEN31_09125 a371c3c4d07ed27947615835d04cf627 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 367 4.7E-36 T 12-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 BEN31_09125 a371c3c4d07ed27947615835d04cf627 368 Gene3D G3DSA:1.10.287.470 95 174 9.7E-42 T 12-10-2018 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 Gene3D G3DSA:2.30.40.10 7 419 6.7E-153 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 Gene3D G3DSA:3.20.20.140 54 366 6.7E-153 T 12-10-2018 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 15 424 8.2E-161 T 12-10-2018 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 SUPERFAMILY SSF51338 1 427 1.59E-28 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 12-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 45.099 T 12-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 Pfam PF01979 Amidohydrolase family 50 420 1.3E-55 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN31_08550 e154496b4bdf212bb328bcc1721d2b08 428 SUPERFAMILY SSF51556 54 368 7.33E-110 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 Gene3D G3DSA:2.60.40.420 174 352 5.0E-66 T 12-10-2018 IPR008972 Cupredoxin BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 SUPERFAMILY SSF49503 359 508 2.72E-32 T 12-10-2018 IPR008972 Cupredoxin BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 Gene3D G3DSA:2.60.40.420 358 509 9.6E-51 T 12-10-2018 IPR008972 Cupredoxin BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 SUPERFAMILY SSF49503 3 174 7.64E-34 T 12-10-2018 IPR008972 Cupredoxin BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 Pfam PF00394 Multicopper oxidase 242 313 3.8E-6 T 12-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 Gene3D G3DSA:2.60.40.420 1 172 1.8E-66 T 12-10-2018 IPR008972 Cupredoxin BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 Pfam PF07731 Multicopper oxidase 376 506 3.8E-21 T 12-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 Pfam PF07732 Multicopper oxidase 45 79 2.5E-6 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 Pfam PF07732 Multicopper oxidase 99 174 7.1E-6 T 12-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 BEN31_12810 861f0de8b4dd1e6b1f206a6fc854a069 509 SUPERFAMILY SSF49503 180 309 7.68E-29 T 12-10-2018 IPR008972 Cupredoxin BEN31_14315 32e4e4a6b52c571a33c6a49a582bd102 502 Pfam PF00501 AMP-binding enzyme 11 405 7.4E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_14315 32e4e4a6b52c571a33c6a49a582bd102 502 Gene3D G3DSA:3.30.300.30 402 501 7.9E-27 T 12-10-2018 BEN31_14315 32e4e4a6b52c571a33c6a49a582bd102 502 Gene3D G3DSA:3.40.50.12780 2 401 3.7E-108 T 12-10-2018 BEN31_14315 32e4e4a6b52c571a33c6a49a582bd102 502 SUPERFAMILY SSF56801 2 501 2.88E-134 T 12-10-2018 BEN31_14315 32e4e4a6b52c571a33c6a49a582bd102 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 489 6.4E-15 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_14315 32e4e4a6b52c571a33c6a49a582bd102 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 162 173 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_08525 1eca824ffb83880a06132ff83d4fa6ea 234 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 12-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08525 1eca824ffb83880a06132ff83d4fa6ea 234 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 38.846 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08525 1eca824ffb83880a06132ff83d4fa6ea 234 Gene3D G3DSA:3.20.20.70 4 234 7.3E-79 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_08525 1eca824ffb83880a06132ff83d4fa6ea 234 SMART SM00934 4 229 1.5E-85 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08525 1eca824ffb83880a06132ff83d4fa6ea 234 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 229 4.9E-61 T 12-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08525 1eca824ffb83880a06132ff83d4fa6ea 234 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 228 9.7E-46 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08525 1eca824ffb83880a06132ff83d4fa6ea 234 SUPERFAMILY SSF51366 2 233 6.48E-68 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_18245 8aea40a37b2f551d1d865ceaad858242 391 SUPERFAMILY SSF55874 254 383 2.49E-19 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_18245 8aea40a37b2f551d1d865ceaad858242 391 Gene3D G3DSA:3.30.565.10 256 383 1.1E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_18245 8aea40a37b2f551d1d865ceaad858242 391 PIRSF PIRSF003169 1 388 1.4E-162 T 12-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 BEN31_18245 8aea40a37b2f551d1d865ceaad858242 391 Pfam PF07730 Histidine kinase 180 248 1.6E-16 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN31_18245 8aea40a37b2f551d1d865ceaad858242 391 SMART SM00387 289 385 2.1E-10 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_18245 8aea40a37b2f551d1d865ceaad858242 391 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 291 384 4.2E-11 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_18245 8aea40a37b2f551d1d865ceaad858242 391 Pfam PF05384 Sensor protein DegS 12 170 1.2E-59 T 12-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 PRINTS PR00139 Asparaginase/glutaminase family signature 59 70 1.1E-21 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 PRINTS PR00139 Asparaginase/glutaminase family signature 139 157 1.1E-21 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 PRINTS PR00139 Asparaginase/glutaminase family signature 318 336 1.1E-21 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 Pfam PF00710 Asparaginase, N-terminal 58 251 1.1E-57 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 PIRSF PIRSF001220 53 381 7.5E-88 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 SUPERFAMILY SSF53774 57 381 8.37E-98 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 61 69 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 SMART SM00870 58 376 1.6E-133 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 Gene3D G3DSA:3.40.50.40 271 382 1.5E-37 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 140 150 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 Gene3D G3DSA:3.40.50.1170 53 270 5.0E-84 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 PIRSF PIRSF500176 55 382 8.3E-75 T 12-10-2018 BEN31_13120 2f512d90556d2fc1bbb341f54d39f24a 382 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 45 382 8.3E-141 T 12-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 BEN31_09825 29d0fbbf8b795fb7fd0e1ed47c4f33de 318 SUPERFAMILY SSF100950 59 313 2.68E-74 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_09825 29d0fbbf8b795fb7fd0e1ed47c4f33de 318 Pfam PF04198 Putative sugar-binding domain 60 313 9.3E-82 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 BEN31_09825 29d0fbbf8b795fb7fd0e1ed47c4f33de 318 Gene3D G3DSA:1.10.10.60 1 53 9.0E-22 T 12-10-2018 BEN31_09825 29d0fbbf8b795fb7fd0e1ed47c4f33de 318 Gene3D G3DSA:3.40.50.1360 56 316 7.5E-90 T 12-10-2018 BEN31_07725 ea2d2c2821239d08a8e298af032a5ab2 157 Gene3D G3DSA:1.20.58.1290 61 156 3.4E-27 T 12-10-2018 BEN31_07725 ea2d2c2821239d08a8e298af032a5ab2 157 SMART SM01058 1 109 7.0E-34 T 12-10-2018 IPR003711 CarD-like/TRCF domain BEN31_07725 ea2d2c2821239d08a8e298af032a5ab2 157 Pfam PF02559 CarD-like/TRCF domain 2 108 4.5E-18 T 12-10-2018 IPR003711 CarD-like/TRCF domain BEN31_07725 ea2d2c2821239d08a8e298af032a5ab2 157 Gene3D G3DSA:2.30.30.840 1 60 2.5E-22 T 12-10-2018 BEN31_07725 ea2d2c2821239d08a8e298af032a5ab2 157 SUPERFAMILY SSF141259 2 65 3.14E-13 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily BEN31_17325 f3d1e1676b65e9872a46bdae6b8b4ff9 281 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 7 281 49.125 T 12-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 BEN31_17325 f3d1e1676b65e9872a46bdae6b8b4ff9 281 Gene3D G3DSA:3.30.930.10 6 281 2.4E-81 T 12-10-2018 BEN31_17325 f3d1e1676b65e9872a46bdae6b8b4ff9 281 SUPERFAMILY SSF55681 7 273 2.07E-70 T 12-10-2018 BEN31_17325 f3d1e1676b65e9872a46bdae6b8b4ff9 281 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 184 6.3E-17 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN31_01060 85cbbe2f2ae15e8ef91e73fa93a7029f 228 SUPERFAMILY SSF52833 42 220 1.97E-39 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_01060 85cbbe2f2ae15e8ef91e73fa93a7029f 228 Gene3D G3DSA:3.40.30.10 31 228 6.0E-60 T 12-10-2018 BEN31_01060 85cbbe2f2ae15e8ef91e73fa93a7029f 228 Pfam PF13462 Thioredoxin 49 221 3.6E-40 T 12-10-2018 IPR012336 Thioredoxin-like fold BEN31_03875 3f6bdbcf06f543d98c28f4137a953415 421 SMART SM00257 3 48 7.3E-18 T 12-10-2018 IPR018392 LysM domain BEN31_03875 3f6bdbcf06f543d98c28f4137a953415 421 SUPERFAMILY SSF54106 2 48 1.26E-11 T 12-10-2018 BEN31_03875 3f6bdbcf06f543d98c28f4137a953415 421 Gene3D G3DSA:3.10.350.10 1 60 3.6E-16 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_03875 3f6bdbcf06f543d98c28f4137a953415 421 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 49 6.1E-27 T 12-10-2018 IPR014248 Spore coat assembly protein SafA BEN31_03875 3f6bdbcf06f543d98c28f4137a953415 421 Pfam PF01476 LysM domain 4 48 4.6E-16 T 12-10-2018 IPR018392 LysM domain BEN31_14545 1813dbd7271941bb42aa2e0c61fd8dd7 117 SUPERFAMILY SSF52821 5 116 9.43E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_14545 1813dbd7271941bb42aa2e0c61fd8dd7 117 Gene3D G3DSA:3.40.250.10 22 117 2.1E-30 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_14545 1813dbd7271941bb42aa2e0c61fd8dd7 117 Pfam PF00581 Rhodanese-like domain 31 116 2.4E-18 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_14545 1813dbd7271941bb42aa2e0c61fd8dd7 117 SMART SM00450 27 117 4.3E-19 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_09335 8e5ed198403454eb16044241fbd40795 276 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 1 149 3.1E-46 T 12-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 BEN31_09335 8e5ed198403454eb16044241fbd40795 276 PIRSF PIRSF000103 1 275 1.3E-67 T 12-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 BEN31_09335 8e5ed198403454eb16044241fbd40795 276 Gene3D G3DSA:3.40.50.720 1 151 2.4E-46 T 12-10-2018 BEN31_09335 8e5ed198403454eb16044241fbd40795 276 SUPERFAMILY SSF48179 152 274 6.57E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_09335 8e5ed198403454eb16044241fbd40795 276 SUPERFAMILY SSF51735 1 152 6.9E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_09335 8e5ed198403454eb16044241fbd40795 276 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 154 274 1.3E-35 T 12-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 BEN31_09335 8e5ed198403454eb16044241fbd40795 276 Gene3D G3DSA:1.10.1040.10 152 276 8.5E-41 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 SMART SM00490 256 337 3.9E-31 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 Pfam PF03880 DbpA RNA binding domain 406 476 1.7E-18 T 12-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 479 66.56 T 12-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 SUPERFAMILY SSF52540 71 352 2.51E-69 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 SMART SM00487 23 217 5.9E-54 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 12-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 Gene3D G3DSA:3.30.70.330 405 480 3.1E-28 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 Pfam PF00271 Helicase conserved C-terminal domain 235 337 1.3E-29 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 Gene3D G3DSA:3.40.50.300 4 209 2.8E-70 T 12-10-2018 BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 Gene3D G3DSA:3.40.50.300 210 397 2.5E-48 T 12-10-2018 BEN31_03100 e55a481869adbaf6324de4b86bc5a075 480 Pfam PF00270 DEAD/DEAH box helicase 28 194 6.7E-44 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SUPERFAMILY SSF81301 152 314 1.9E-41 T 12-10-2018 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Gene3D G3DSA:3.20.20.140 324 570 3.8E-76 T 12-10-2018 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Gene3D G3DSA:3.30.460.10 152 258 1.1E-22 T 12-10-2018 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SUPERFAMILY SSF47802 2 81 1.96E-20 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Gene3D G3DSA:3.30.210.10 259 323 1.7E-14 T 12-10-2018 IPR037160 DNA polymerase, thumb domain superfamily BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Gene3D G3DSA:1.10.150.110 1 82 1.0E-19 T 12-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Pfam PF14716 Helix-hairpin-helix domain 4 69 2.9E-18 T 12-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SMART SM00483 1 314 1.3E-87 T 12-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SMART SM00278 123 142 2.1 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SMART SM00278 48 67 4.8 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SMART SM00278 88 107 71.0 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SMART SM00481 336 415 1.1E-22 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Pfam PF14791 DNA polymerase beta thumb 253 314 9.1E-16 T 12-10-2018 IPR029398 DNA polymerase beta, thumb domain BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Pfam PF02811 PHP domain 337 464 8.7E-7 T 12-10-2018 IPR004013 PHP domain GO:0003824 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Gene3D G3DSA:1.10.150.20 83 148 1.8E-19 T 12-10-2018 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 SUPERFAMILY SSF89550 334 569 1.7E-54 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 PIRSF PIRSF005047 1 570 2.6E-240 T 12-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03435 d26aa15b6ee58e421e45164e0120279d 570 Pfam PF14520 Helix-hairpin-helix domain 90 144 3.8E-7 T 12-10-2018 BEN31_06715 808f2ecf7fe7e91aed292ec5b2e1a65d 157 Pfam PF14526 Integron-associated effector binding protein 4 145 1.8E-18 T 12-10-2018 IPR029441 Integron-associated effector binding protein BEN31_06715 808f2ecf7fe7e91aed292ec5b2e1a65d 157 SUPERFAMILY SSF55136 2 146 6.28E-17 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_06715 808f2ecf7fe7e91aed292ec5b2e1a65d 157 Gene3D G3DSA:3.20.80.10 1 146 3.8E-35 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_06715 808f2ecf7fe7e91aed292ec5b2e1a65d 157 SMART SM00871 2 146 2.4E-19 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding BEN31_06840 fddc93644be4610619e507f36c0af500 752 Gene3D G3DSA:1.10.10.1100 411 465 5.3E-8 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 Gene3D G3DSA:3.30.413.10 599 751 1.9E-10 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 Pfam PF04324 BFD-like [2Fe-2S] binding domain 411 456 2.8E-11 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BEN31_06840 fddc93644be4610619e507f36c0af500 752 Pfam PF04324 BFD-like [2Fe-2S] binding domain 474 523 1.4E-8 T 12-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain BEN31_06840 fddc93644be4610619e507f36c0af500 752 SUPERFAMILY SSF56014 617 732 7.27E-12 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 282 4.0E-58 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_06840 fddc93644be4610619e507f36c0af500 752 Gene3D G3DSA:3.50.50.60 8 302 3.0E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06840 fddc93644be4610619e507f36c0af500 752 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 600 733 8.6E-5 T 12-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.2E-19 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 2.2E-19 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.2E-19 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.2E-19 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.2E-19 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 2.8E-12 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.8E-12 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 2.8E-12 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 2.8E-12 T 12-10-2018 BEN31_06840 fddc93644be4610619e507f36c0af500 752 Gene3D G3DSA:3.50.50.60 115 239 3.0E-83 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06840 fddc93644be4610619e507f36c0af500 752 SUPERFAMILY SSF51905 61 305 5.11E-37 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_13625 83f87204c9716ed188e5f18e873893e0 253 Pfam PF01614 Bacterial transcriptional regulator 121 245 1.6E-31 T 12-10-2018 IPR014757 Transcription regulator IclR, C-terminal BEN31_13625 83f87204c9716ed188e5f18e873893e0 253 Pfam PF09339 IclR helix-turn-helix domain 8 56 2.6E-11 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BEN31_13625 83f87204c9716ed188e5f18e873893e0 253 Gene3D G3DSA:1.10.10.10 4 76 1.5E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13625 83f87204c9716ed188e5f18e873893e0 253 SUPERFAMILY SSF55781 61 249 7.19E-47 T 12-10-2018 BEN31_13625 83f87204c9716ed188e5f18e873893e0 253 SMART SM00346 5 93 1.2E-23 T 12-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 BEN31_13625 83f87204c9716ed188e5f18e873893e0 253 Gene3D G3DSA:3.30.450.40 77 252 4.6E-50 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_13625 83f87204c9716ed188e5f18e873893e0 253 SUPERFAMILY SSF46785 6 77 9.8E-13 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_09450 313cee723dfeae67c156f55759872df2 700 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 610 688 3.8E-23 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_09450 313cee723dfeae67c156f55759872df2 700 SUPERFAMILY SSF52540 73 338 4.74E-67 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09450 313cee723dfeae67c156f55759872df2 700 Pfam PF02151 UvrB/uvrC motif 326 359 1.0E-5 T 12-10-2018 IPR001943 UVR domain GO:0005515 BEN31_09450 313cee723dfeae67c156f55759872df2 700 Pfam PF07724 AAA domain (Cdc48 subfamily) 437 604 3.1E-52 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_09450 313cee723dfeae67c156f55759872df2 700 Gene3D G3DSA:1.10.8.60 610 699 1.5E-24 T 12-10-2018 BEN31_09450 313cee723dfeae67c156f55759872df2 700 Gene3D G3DSA:3.40.50.300 391 609 2.6E-83 T 12-10-2018 BEN31_09450 313cee723dfeae67c156f55759872df2 700 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 487 505 6.4E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_09450 313cee723dfeae67c156f55759872df2 700 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 516 534 6.4E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_09450 313cee723dfeae67c156f55759872df2 700 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 549 563 6.4E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_09450 313cee723dfeae67c156f55759872df2 700 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 442 460 6.4E-37 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_09450 313cee723dfeae67c156f55759872df2 700 Gene3D G3DSA:3.40.50.300 61 253 2.5E-65 T 12-10-2018 BEN31_09450 313cee723dfeae67c156f55759872df2 700 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 206 218 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BEN31_09450 313cee723dfeae67c156f55759872df2 700 SUPERFAMILY SSF52540 387 688 4.63E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09450 313cee723dfeae67c156f55759872df2 700 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 472 490 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 BEN31_09450 313cee723dfeae67c156f55759872df2 700 Gene3D G3DSA:4.10.860.10 319 368 4.7E-37 T 12-10-2018 BEN31_09450 313cee723dfeae67c156f55759872df2 700 Gene3D G3DSA:1.10.8.60 256 382 4.7E-37 T 12-10-2018 BEN31_09450 313cee723dfeae67c156f55759872df2 700 SMART SM01086 610 697 2.6E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_09450 313cee723dfeae67c156f55759872df2 700 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 116 248 6.7E-12 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_09450 313cee723dfeae67c156f55759872df2 700 SMART SM00382 438 611 1.3E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_09450 313cee723dfeae67c156f55759872df2 700 SMART SM00382 111 255 1.1E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 Gene3D G3DSA:1.10.287.380 552 640 2.5E-6 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 SUPERFAMILY SSF52540 310 529 1.07E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 Gene3D G3DSA:3.40.50.300 1 285 1.1E-66 T 12-10-2018 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 Pfam PF00005 ABC transporter 19 191 3.4E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 Gene3D G3DSA:3.40.50.300 289 551 3.9E-61 T 12-10-2018 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 Pfam PF16326 ABC transporter C-terminal domain 573 639 2.8E-14 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 SMART SM00382 352 527 1.1E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 SMART SM00382 28 346 6.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 SUPERFAMILY SSF52540 4 232 1.31E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 Pfam PF00005 ABC transporter 343 473 5.7E-23 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_12920 ba6d143bc821a18b498b24cad73b7df6 640 Pfam PF12848 ABC transporter 231 316 3.0E-25 T 12-10-2018 IPR032781 ABC-transporter extension domain BEN31_16355 27a23f7ccc9c3e82dab0b1f526c84d03 112 SUPERFAMILY SSF82057 40 112 9.61E-29 T 12-10-2018 BEN31_16355 27a23f7ccc9c3e82dab0b1f526c84d03 112 Gene3D G3DSA:2.20.25.10 1 42 2.0E-19 T 12-10-2018 BEN31_16355 27a23f7ccc9c3e82dab0b1f526c84d03 112 Pfam PF03831 PhnA domain 45 112 1.7E-33 T 12-10-2018 IPR013988 PhnA protein, C-terminal BEN31_16355 27a23f7ccc9c3e82dab0b1f526c84d03 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 1.2E-50 T 12-10-2018 IPR004624 PhnA protein BEN31_16355 27a23f7ccc9c3e82dab0b1f526c84d03 112 Pfam PF08274 PhnA Zinc-Ribbon 4 32 7.5E-14 T 12-10-2018 IPR013987 PhnA protein, N-terminal BEN31_16355 27a23f7ccc9c3e82dab0b1f526c84d03 112 Gene3D G3DSA:2.30.30.40 43 112 1.0E-34 T 12-10-2018 BEN31_16355 27a23f7ccc9c3e82dab0b1f526c84d03 112 SUPERFAMILY SSF57783 3 36 7.48E-14 T 12-10-2018 BEN31_18060 5465c15ec4926d3a54bbb211645fcc5e 273 SUPERFAMILY SSF161098 4 273 1.21E-64 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_18060 5465c15ec4926d3a54bbb211645fcc5e 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 266 1.7E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_18060 5465c15ec4926d3a54bbb211645fcc5e 273 Gene3D G3DSA:1.10.3720.10 2 264 1.9E-53 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_14750 0002186629df33a5dac82da1e19f771a 303 Gene3D G3DSA:1.10.8.1080 222 300 3.6E-28 T 12-10-2018 BEN31_14750 0002186629df33a5dac82da1e19f771a 303 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 9 299 4.5E-135 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BEN31_14750 0002186629df33a5dac82da1e19f771a 303 Pfam PF13580 SIS domain 42 168 2.1E-11 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_14750 0002186629df33a5dac82da1e19f771a 303 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 298 41.29 T 12-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 BEN31_14750 0002186629df33a5dac82da1e19f771a 303 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 12-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 BEN31_14750 0002186629df33a5dac82da1e19f771a 303 Gene3D G3DSA:3.40.50.10490 3 221 1.5E-77 T 12-10-2018 BEN31_14750 0002186629df33a5dac82da1e19f771a 303 SUPERFAMILY SSF53697 9 251 2.67E-70 T 12-10-2018 BEN31_17820 888c4891547730144e104e3862df4ca5 351 Gene3D G3DSA:1.25.40.10 2 350 2.6E-74 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_17820 888c4891547730144e104e3862df4ca5 351 SUPERFAMILY SSF48452 84 249 2.91E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_17820 888c4891547730144e104e3862df4ca5 351 Pfam PF13424 Tetratricopeptide repeat 175 238 4.0E-9 T 12-10-2018 BEN31_17820 888c4891547730144e104e3862df4ca5 351 SMART SM00028 89 122 370.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_17820 888c4891547730144e104e3862df4ca5 351 SMART SM00028 209 242 0.81 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_17820 888c4891547730144e104e3862df4ca5 351 SMART SM00028 169 202 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09160 f28a278b0ad394437d85c16f8a6ebe13 338 Gene3D G3DSA:3.40.50.720 2 250 2.1E-73 T 12-10-2018 BEN31_09160 f28a278b0ad394437d85c16f8a6ebe13 338 Pfam PF00899 ThiF family 5 241 2.1E-57 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BEN31_09160 f28a278b0ad394437d85c16f8a6ebe13 338 SUPERFAMILY SSF69572 2 327 2.49E-81 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BEN31_04860 ed4259b41d863c96d1353f5a4a2fa5fc 186 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 179 6.3E-56 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BEN31_04860 ed4259b41d863c96d1353f5a4a2fa5fc 186 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 179 1.6E-54 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BEN31_04860 ed4259b41d863c96d1353f5a4a2fa5fc 186 PIRSF PIRSF006806 1 182 1.4E-53 T 12-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase BEN31_04860 ed4259b41d863c96d1353f5a4a2fa5fc 186 Gene3D G3DSA:3.40.50.10420 1 185 1.7E-64 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BEN31_04860 ed4259b41d863c96d1353f5a4a2fa5fc 186 SUPERFAMILY SSF100950 1 184 1.4E-54 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_14165 6702101c682715f6e570c93e4c70b9c3 271 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 54 223 1.1E-5 T 12-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal BEN31_14165 6702101c682715f6e570c93e4c70b9c3 271 PIRSF PIRSF030802 1 237 3.1E-17 T 12-10-2018 IPR024197 Uncharacterised conserved protein UCP030802 BEN31_14165 6702101c682715f6e570c93e4c70b9c3 271 Gene3D G3DSA:3.40.50.1000 1 137 1.3E-16 T 12-10-2018 IPR023214 HAD superfamily BEN31_14165 6702101c682715f6e570c93e4c70b9c3 271 SUPERFAMILY SSF56784 1 231 3.54E-16 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_13365 25bd39774edc6bbab8235f78052e593b 121 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 112 3.3E-22 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_13365 25bd39774edc6bbab8235f78052e593b 121 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 118 1.4E-31 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BEN31_13365 25bd39774edc6bbab8235f78052e593b 121 SUPERFAMILY SSF56214 1 117 1.28E-33 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_13365 25bd39774edc6bbab8235f78052e593b 121 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 118 24.438 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BEN31_13365 25bd39774edc6bbab8235f78052e593b 121 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 3.0E-42 T 12-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BEN31_13365 25bd39774edc6bbab8235f78052e593b 121 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 119 4.0E-37 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BEN31_13365 25bd39774edc6bbab8235f78052e593b 121 Gene3D G3DSA:3.90.470.20 1 121 3.6E-38 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_08415 590c8288b8118639af90909c04993f4c 651 SMART SM00220 11 268 1.8E-70 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN31_08415 590c8288b8118639af90909c04993f4c 651 SUPERFAMILY SSF56112 8 268 1.08E-82 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_08415 590c8288b8118639af90909c04993f4c 651 Gene3D G3DSA:1.10.510.10 92 276 2.7E-53 T 12-10-2018 BEN31_08415 590c8288b8118639af90909c04993f4c 651 Gene3D G3DSA:2.60.40.2560 569 647 1.2E-16 T 12-10-2018 BEN31_08415 590c8288b8118639af90909c04993f4c 651 Pfam PF00069 Protein kinase domain 11 258 8.9E-55 T 12-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 BEN31_08415 590c8288b8118639af90909c04993f4c 651 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 12-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 BEN31_08415 590c8288b8118639af90909c04993f4c 651 Gene3D G3DSA:3.30.200.20 1 90 7.4E-34 T 12-10-2018 BEN31_08415 590c8288b8118639af90909c04993f4c 651 Gene3D G3DSA:3.30.10.20 430 497 1.2E-17 T 12-10-2018 BEN31_08415 590c8288b8118639af90909c04993f4c 651 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 12-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 BEN31_08415 590c8288b8118639af90909c04993f4c 651 Gene3D G3DSA:3.30.10.20 500 565 3.6E-17 T 12-10-2018 BEN31_08415 590c8288b8118639af90909c04993f4c 651 Gene3D G3DSA:3.30.10.20 361 428 1.7E-15 T 12-10-2018 BEN31_08415 590c8288b8118639af90909c04993f4c 651 SMART SM00740 358 426 4.7E-13 T 12-10-2018 IPR005543 PASTA domain BEN31_08415 590c8288b8118639af90909c04993f4c 651 SMART SM00740 427 495 3.6E-16 T 12-10-2018 IPR005543 PASTA domain BEN31_08415 590c8288b8118639af90909c04993f4c 651 SMART SM00740 496 562 9.3E-18 T 12-10-2018 IPR005543 PASTA domain BEN31_08415 590c8288b8118639af90909c04993f4c 651 Pfam PF03793 PASTA domain 432 494 1.8E-15 T 12-10-2018 IPR005543 PASTA domain BEN31_08415 590c8288b8118639af90909c04993f4c 651 Pfam PF03793 PASTA domain 362 424 1.1E-12 T 12-10-2018 IPR005543 PASTA domain BEN31_08415 590c8288b8118639af90909c04993f4c 651 Pfam PF03793 PASTA domain 501 561 3.1E-14 T 12-10-2018 IPR005543 PASTA domain BEN31_18405 4f44ba74cad04cb412f38f87ac1fe655 117 ProDom PD072806 SWRA MOTILITY YVZD SWARMING MOTILITY-SWARMING 22 117 2.0E-38 T 12-10-2018 IPR035388 Swarming motility protein SwrA BEN31_18405 4f44ba74cad04cb412f38f87ac1fe655 117 Pfam PF17423 Swarming motility protein 1 116 4.7E-60 T 12-10-2018 IPR035388 Swarming motility protein SwrA BEN31_01380 60ee768b563c82e1ffb6415a07a9f19f 437 SUPERFAMILY SSF101960 12 436 1.03E-118 T 12-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily BEN31_01380 60ee768b563c82e1ffb6415a07a9f19f 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 411 2.2E-62 T 12-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 BEN31_01380 60ee768b563c82e1ffb6415a07a9f19f 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 428 3.2E-73 T 12-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 SMART SM01091 354 431 3.3E-19 T 12-10-2018 IPR005170 Transporter-associated domain BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 Pfam PF03471 Transporter associated domain 355 430 3.5E-16 T 12-10-2018 IPR005170 Transporter-associated domain BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 Gene3D G3DSA:3.30.465.10 349 439 4.0E-14 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 Pfam PF01595 Domain of unknown function DUF21 7 201 7.7E-49 T 12-10-2018 IPR002550 CNNM, transmembrane domain BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 SUPERFAMILY SSF54631 204 341 3.92E-28 T 12-10-2018 BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 Gene3D G3DSA:3.10.580.10 195 348 1.3E-47 T 12-10-2018 BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 SUPERFAMILY SSF56176 352 436 3.82E-15 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN31_11145 3fb7a8687eaea70fd806a5c01646e131 443 Pfam PF00571 CBS domain 290 338 1.7E-4 T 12-10-2018 IPR000644 CBS domain BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 Gene3D G3DSA:3.40.50.720 2 239 4.5E-45 T 12-10-2018 BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 SUPERFAMILY SSF51735 4 226 1.27E-45 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 4.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 4.3E-16 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 4.8E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 4.8E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 4.8E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 Pfam PF00106 short chain dehydrogenase 4 192 1.0E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13140 e3a794cc66e6664a34731be981f74fb3 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_12310 14cbf08fb7c3ea879823289ef163d734 400 Gene3D G3DSA:1.20.1250.20 1 388 4.6E-32 T 12-10-2018 BEN31_12310 14cbf08fb7c3ea879823289ef163d734 400 Pfam PF07690 Major Facilitator Superfamily 12 327 7.8E-16 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_12310 14cbf08fb7c3ea879823289ef163d734 400 SUPERFAMILY SSF103473 3 384 1.44E-28 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_08890 c0dbe886aecfe7cce02f4fab937dc684 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 21 304 18.239 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BEN31_08890 c0dbe886aecfe7cce02f4fab937dc684 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 81 103 - T 12-10-2018 IPR030470 UbiA prenyltransferase conserved site BEN31_08890 c0dbe886aecfe7cce02f4fab937dc684 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 23 301 8.5E-96 T 12-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 BEN31_08890 c0dbe886aecfe7cce02f4fab937dc684 305 Pfam PF01040 UbiA prenyltransferase family 39 288 4.9E-59 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BEN31_08890 c0dbe886aecfe7cce02f4fab937dc684 305 Gene3D G3DSA:1.10.357.140 33 190 4.5E-18 T 12-10-2018 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 157 4.3E-27 T 12-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 157 33.12 T 12-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 Gene3D G3DSA:1.10.287.180 5 78 5.4E-32 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 Gene3D G3DSA:3.10.50.30 79 157 8.9E-28 T 12-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 7.6E-59 T 12-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 SUPERFAMILY SSF46557 7 79 1.07E-27 T 12-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 12-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 7.9E-32 T 12-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 SUPERFAMILY SSF54534 83 156 4.05E-22 T 12-10-2018 BEN31_04145 9291a2733eed5c488a170e41950daa94 157 PIRSF PIRSF006092 1 157 3.5E-53 T 12-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 BEN31_15070 1ddfacb80886eb17d259a72e80f6b99f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.8E-66 T 12-10-2018 IPR023798 Ribosomal protein S7 domain BEN31_15070 1ddfacb80886eb17d259a72e80f6b99f 156 SUPERFAMILY SSF47973 1 149 3.53E-61 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BEN31_15070 1ddfacb80886eb17d259a72e80f6b99f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 12-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15070 1ddfacb80886eb17d259a72e80f6b99f 156 Gene3D G3DSA:1.10.455.10 2 156 2.0E-64 T 12-10-2018 IPR036823 Ribosomal protein S7 domain superfamily BEN31_15070 1ddfacb80886eb17d259a72e80f6b99f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.1E-70 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BEN31_15070 1ddfacb80886eb17d259a72e80f6b99f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.472 T 12-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 BEN31_15070 1ddfacb80886eb17d259a72e80f6b99f 156 PIRSF PIRSF002122 5 156 5.6E-59 T 12-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 Gene3D G3DSA:3.40.1410.10 88 228 1.0E-30 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 SMART SM00345 9 68 4.2E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 Pfam PF07702 UTRA domain 91 229 1.1E-30 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 Gene3D G3DSA:1.10.10.10 5 72 1.4E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 SUPERFAMILY SSF64288 75 234 6.28E-40 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 SMART SM00866 90 229 3.4E-27 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 SUPERFAMILY SSF46785 4 72 2.53E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 5 236 7.6E-96 T 12-10-2018 IPR012770 Trehalose operon transcriptional repressor BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 9.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 9.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_12060 d9fd31dfd7ffd34ad5452acd7925f3b9 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 66 1.7E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_09045 5a429dd970749706455e30ab38f28066 555 PIRSF PIRSF004803 1 555 3.6E-248 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BEN31_09045 5a429dd970749706455e30ab38f28066 555 Gene3D G3DSA:3.40.50.10710 207 357 2.0E-194 T 12-10-2018 BEN31_09045 5a429dd970749706455e30ab38f28066 555 Pfam PF00753 Metallo-beta-lactamase superfamily 20 167 5.0E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_09045 5a429dd970749706455e30ab38f28066 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 48.026 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BEN31_09045 5a429dd970749706455e30ab38f28066 555 Gene3D G3DSA:3.60.15.10 12 442 2.0E-194 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_09045 5a429dd970749706455e30ab38f28066 555 Gene3D G3DSA:3.10.20.580 449 555 1.7E-39 T 12-10-2018 BEN31_09045 5a429dd970749706455e30ab38f28066 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 360 407 2.8E-8 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BEN31_09045 5a429dd970749706455e30ab38f28066 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 3.9E-236 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 BEN31_09045 5a429dd970749706455e30ab38f28066 555 SMART SM00849 21 215 1.2E-24 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_09045 5a429dd970749706455e30ab38f28066 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 12-10-2018 IPR001587 Ribonuclease J, conserved site BEN31_09045 5a429dd970749706455e30ab38f28066 555 SUPERFAMILY SSF56281 11 423 4.9E-95 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_16655 bd386c10022e949fb4166e4d7da4822a 115 SUPERFAMILY SSF47413 3 67 2.95E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_16655 bd386c10022e949fb4166e4d7da4822a 115 Pfam PF01381 Helix-turn-helix 9 60 1.7E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_16655 bd386c10022e949fb4166e4d7da4822a 115 SMART SM00530 5 60 7.6E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_16655 bd386c10022e949fb4166e4d7da4822a 115 Gene3D G3DSA:1.10.260.40 1 114 6.6E-21 T 12-10-2018 BEN31_09540 b38466d1ad8b691e3c32cef9e939d09b 450 Pfam PF02386 Cation transport protein 26 428 1.2E-61 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 SUPERFAMILY SSF52283 22 126 1.78E-32 T 12-10-2018 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 SUPERFAMILY SSF51735 95 279 2.89E-60 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 Gene3D G3DSA:3.40.50.720 91 280 3.5E-113 T 12-10-2018 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 SUPERFAMILY SSF55021 440 522 9.82E-21 T 12-10-2018 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 524 8.1E-220 T 12-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 1.2E-61 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 Gene3D G3DSA:3.30.1330.90 317 450 3.0E-32 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 12-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 Gene3D G3DSA:3.30.70.260 451 524 3.1E-23 T 12-10-2018 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 SUPERFAMILY SSF143548 316 446 1.02E-31 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 Pfam PF01842 ACT domain 453 512 1.8E-9 T 12-10-2018 IPR002912 ACT domain BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 307 1.5E-33 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BEN31_05740 5d12f8af7c187ff7b78a59dc3829d2a4 524 Gene3D G3DSA:3.40.50.720 4 289 3.5E-113 T 12-10-2018 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.0E-24 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 Pfam PF00557 Metallopeptidase family M24 12 239 9.9E-57 T 12-10-2018 IPR000994 Peptidase M24 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 43.534 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 Gene3D G3DSA:3.90.230.10 1 248 1.0E-108 T 12-10-2018 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 SUPERFAMILY SSF55920 1 247 1.16E-90 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 3.7E-104 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_14935 edb34a7f6d729d3c84d767e260107603 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 SUPERFAMILY SSF56281 502 755 5.01E-51 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 Pfam PF03772 Competence protein 207 468 6.2E-59 T 12-10-2018 IPR004477 ComEC/Rec2-related protein BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 81 750 1.6E-146 T 12-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 Pfam PF13567 Domain of unknown function (DUF4131) 27 165 2.3E-12 T 12-10-2018 IPR025405 Domain of unknown function DUF4131 BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 SMART SM00849 510 721 3.9E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 228 399 6.4E-37 T 12-10-2018 IPR004477 ComEC/Rec2-related protein BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 Gene3D G3DSA:3.60.15.10 499 763 1.0E-74 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_04510 ca0a90595337b788b8d6e6cf63ba13f1 775 Pfam PF00753 Metallo-beta-lactamase superfamily 507 719 1.0E-15 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 3.7E-140 T 12-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.1E-40 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 SUPERFAMILY SSF51735 3 168 2.82E-68 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 Gene3D G3DSA:3.30.360.10 151 315 5.2E-160 T 12-10-2018 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 PIRSF PIRSF000149 1 334 2.6E-142 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 SUPERFAMILY SSF55347 152 314 4.76E-74 T 12-10-2018 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 12-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.1E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.1E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.1E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.1E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.1E-41 T 12-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 Gene3D G3DSA:3.40.50.720 4 329 5.2E-160 T 12-10-2018 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 5.7E-72 T 12-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_00580 48cffc4c2252e794e0191dee5acbbf4a 335 SMART SM00846 3 152 4.6E-98 T 12-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 SMART SM00347 32 129 7.8E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 Gene3D G3DSA:1.10.10.10 21 145 3.3E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.7E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.7E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.7E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 SUPERFAMILY SSF46785 36 143 9.54E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_10065 7b9752a590dff19360f00a7a8e21a9fd 148 Pfam PF01047 MarR family 51 93 3.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_03615 cefc241263c3a4229e58c84d4a45ac7d 388 SUPERFAMILY SSF52266 295 387 1.83E-10 T 12-10-2018 BEN31_03615 cefc241263c3a4229e58c84d4a45ac7d 388 Pfam PF04914 DltD protein 41 386 6.1E-119 T 12-10-2018 IPR006998 DltD BEN31_03615 cefc241263c3a4229e58c84d4a45ac7d 388 PIRSF PIRSF021438 1 388 1.1E-162 T 12-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes BEN31_03615 cefc241263c3a4229e58c84d4a45ac7d 388 Gene3D G3DSA:3.40.50.1110 274 385 2.1E-6 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BEN31_03615 cefc241263c3a4229e58c84d4a45ac7d 388 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 6 385 3.9E-137 T 12-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 Gene3D G3DSA:3.30.1330.30 1 82 1.3E-23 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 82 23.754 T 12-10-2018 IPR023460 Ribosomal protein L7Ae, putative BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 80 1.2E-15 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 SUPERFAMILY SSF55315 5 81 3.61E-19 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 PRINTS PR00884 Ribosomal protein HS6 signature 20 30 1.3E-5 T 12-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 PRINTS PR00884 Ribosomal protein HS6 signature 30 41 1.3E-5 T 12-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 PRINTS PR00884 Ribosomal protein HS6 signature 56 66 1.3E-5 T 12-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15080 ddec8a775b2b1f4ba97ba972cbe617e7 82 PRINTS PR00884 Ribosomal protein HS6 signature 70 82 1.3E-5 T 12-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 SUPERFAMILY SSF51445 130 428 8.67E-46 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 Gene3D G3DSA:3.10.50.10 325 384 1.7E-103 T 12-10-2018 IPR029070 Chitinase insertion domain superfamily BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 SUPERFAMILY SSF54106 4 49 1.26E-11 T 12-10-2018 BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 SUPERFAMILY SSF54106 53 98 1.83E-7 T 12-10-2018 BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 Gene3D G3DSA:3.20.20.80 132 418 1.7E-103 T 12-10-2018 BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 Pfam PF01476 LysM domain 6 49 3.2E-13 T 12-10-2018 IPR018392 LysM domain BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 Pfam PF01476 LysM domain 55 88 3.5E-7 T 12-10-2018 IPR018392 LysM domain BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 SMART SM00257 5 49 4.2E-14 T 12-10-2018 IPR018392 LysM domain BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 SMART SM00257 54 98 1.2E-5 T 12-10-2018 IPR018392 LysM domain BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 Gene3D G3DSA:3.10.350.10 53 109 1.3E-8 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 Gene3D G3DSA:3.10.350.10 2 52 1.4E-15 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 Pfam PF00704 Glycosyl hydrolases family 18 179 411 8.2E-27 T 12-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 BEN31_15655 ca3f51a8770544740329aaa1ee2f1971 433 SMART SM00636 105 413 9.6E-29 T 12-10-2018 IPR011583 Chitinase II GO:0008061 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 5.0E-5 T 12-10-2018 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 SUPERFAMILY SSF52374 4 157 2.73E-43 T 12-10-2018 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 158 3.2E-64 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 Gene3D G3DSA:3.40.50.620 1 160 4.3E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 Pfam PF01467 Cytidylyltransferase-like 7 134 2.8E-20 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 8.8E-20 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.941 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 2.4E-54 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 2.4E-54 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 2.4E-54 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 2.4E-54 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN31_08815 e8a6487b80e608510a17e71dc03bb25c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 2.4E-54 T 12-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 321 4.4E-71 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 SUPERFAMILY SSF55424 337 458 1.89E-36 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 448 5.4E-33 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 259 273 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 301 308 1.4E-64 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 Gene3D G3DSA:3.30.390.30 339 459 3.4E-40 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PIRSF PIRSF000350 1 458 1.7E-91 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 Gene3D G3DSA:3.50.50.60 148 268 4.6E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 Gene3D G3DSA:3.50.50.60 3 326 4.6E-115 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 SUPERFAMILY SSF51905 3 367 3.02E-60 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 458 1.1E-168 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 3.8E-38 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 3.8E-38 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 3.8E-38 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 274 3.8E-38 T 12-10-2018 BEN31_13275 767f6e02e37a5ab935ea498d76b69c0c 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 286 308 3.8E-38 T 12-10-2018 BEN31_03020 c69fce5cd0e5e4d4db0c0341ff4371ad 70 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 65 3.8E-22 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BEN31_03020 c69fce5cd0e5e4d4db0c0341ff4371ad 70 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 44 58 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BEN31_03020 c69fce5cd0e5e4d4db0c0341ff4371ad 70 Gene3D G3DSA:1.10.8.910 11 69 2.5E-30 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BEN31_03020 c69fce5cd0e5e4d4db0c0341ff4371ad 70 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 26 35 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SUPERFAMILY SSF54106 27 71 6.54E-11 T 12-10-2018 BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SUPERFAMILY SSF54106 242 285 1.57E-11 T 12-10-2018 BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Gene3D G3DSA:3.10.350.10 92 145 1.9E-18 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Gene3D G3DSA:3.10.350.10 25 79 2.3E-17 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Gene3D G3DSA:3.10.350.10 239 291 1.7E-18 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Gene3D G3DSA:3.10.350.10 169 222 7.3E-16 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SMART SM00257 243 286 4.8E-16 T 12-10-2018 IPR018392 LysM domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SMART SM00257 28 71 4.2E-18 T 12-10-2018 IPR018392 LysM domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SMART SM00257 96 139 1.8E-15 T 12-10-2018 IPR018392 LysM domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SMART SM00257 173 216 2.0E-15 T 12-10-2018 IPR018392 LysM domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Pfam PF00877 NlpC/P60 family 332 432 3.7E-27 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SUPERFAMILY SSF54001 314 434 7.85E-32 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SUPERFAMILY SSF54106 96 138 1.83E-10 T 12-10-2018 BEN31_06580 09eac5cae4add91672d831426dba64fd 435 SUPERFAMILY SSF54106 173 215 6.8E-10 T 12-10-2018 BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Gene3D G3DSA:3.90.1720.10 311 435 3.8E-31 T 12-10-2018 BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Pfam PF01476 LysM domain 97 138 3.9E-13 T 12-10-2018 IPR018392 LysM domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Pfam PF01476 LysM domain 244 285 6.4E-16 T 12-10-2018 IPR018392 LysM domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Pfam PF01476 LysM domain 174 215 4.6E-13 T 12-10-2018 IPR018392 LysM domain BEN31_06580 09eac5cae4add91672d831426dba64fd 435 Pfam PF01476 LysM domain 30 71 4.3E-15 T 12-10-2018 IPR018392 LysM domain BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 74 86 9.2E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 132 151 9.2E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 9.2E-18 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 ProSitePatterns PS00760 Signal peptidases I lysine active site. 76 88 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 SUPERFAMILY SSF51306 24 164 4.6E-40 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 ProSitePatterns PS00761 Signal peptidases I signature 3. 137 150 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 Pfam PF00717 Peptidase S24-like 30 97 1.7E-15 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 9 163 2.0E-39 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 Gene3D G3DSA:2.10.109.10 54 168 3.2E-35 T 12-10-2018 BEN31_10725 23966249b81d417b1fb609e8b28a9583 170 ProSitePatterns PS00501 Signal peptidases I serine active site. 33 40 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BEN31_02545 279a0c2ffc97b8fef1ef85c9bd5fb363 217 Pfam PF02342 TerD domain 33 213 1.8E-59 T 12-10-2018 IPR003325 TerD domain BEN31_02545 279a0c2ffc97b8fef1ef85c9bd5fb363 217 Gene3D G3DSA:2.60.60.30 48 211 6.9E-49 T 12-10-2018 BEN31_03970 490b095a1f6aef2a25a4bef8df576d6b 774 Pfam PF01368 DHH family 83 225 3.9E-10 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_03970 490b095a1f6aef2a25a4bef8df576d6b 774 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 566 763 7.7E-66 T 12-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal BEN31_03970 490b095a1f6aef2a25a4bef8df576d6b 774 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 559 3.7E-186 T 12-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 BEN31_03970 490b095a1f6aef2a25a4bef8df576d6b 774 Gene3D G3DSA:3.90.1640.30 57 318 4.9E-97 T 12-10-2018 BEN31_03970 490b095a1f6aef2a25a4bef8df576d6b 774 Pfam PF02272 DHHA1 domain 315 437 9.5E-19 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BEN31_03970 490b095a1f6aef2a25a4bef8df576d6b 774 SUPERFAMILY SSF64182 57 450 6.02E-122 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BEN31_03970 490b095a1f6aef2a25a4bef8df576d6b 774 Gene3D G3DSA:3.10.310.30 319 442 1.1E-34 T 12-10-2018 BEN31_02930 21af75229b432c44c0a36170e3455c51 213 Pfam PF00571 CBS domain 74 126 6.4E-9 T 12-10-2018 IPR000644 CBS domain BEN31_02930 21af75229b432c44c0a36170e3455c51 213 Pfam PF00571 CBS domain 4 56 3.5E-15 T 12-10-2018 IPR000644 CBS domain BEN31_02930 21af75229b432c44c0a36170e3455c51 213 SUPERFAMILY SSF54631 1 131 1.07E-32 T 12-10-2018 BEN31_02930 21af75229b432c44c0a36170e3455c51 213 Gene3D G3DSA:3.10.580.10 1 151 8.7E-41 T 12-10-2018 BEN31_02930 21af75229b432c44c0a36170e3455c51 213 SMART SM00116 81 128 2.8E-12 T 12-10-2018 IPR000644 CBS domain BEN31_02930 21af75229b432c44c0a36170e3455c51 213 SMART SM00116 10 58 1.2E-13 T 12-10-2018 IPR000644 CBS domain BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 9.1E-51 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 Gene3D G3DSA:1.10.8.60 310 417 1.3E-37 T 12-10-2018 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 1.6E-18 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.587 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 SMART SM00994 10 49 8.0E-24 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 SUPERFAMILY SSF57716 11 46 1.71E-11 T 12-10-2018 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 405 5.9E-216 T 12-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.6E-20 T 12-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 SMART SM00382 108 259 9.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 Gene3D G3DSA:3.30.50.30 3 50 1.0E-21 T 12-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 Gene3D G3DSA:3.40.50.300 53 309 5.2E-107 T 12-10-2018 BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 SMART SM01086 311 407 3.3E-34 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_03680 c28aa01a882000cc109faec871a2e4f0 421 SUPERFAMILY SSF52540 59 392 3.58E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03015 acdcba7919b557cf658c1568755b6109 401 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 2.2E-68 T 12-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 BEN31_03015 acdcba7919b557cf658c1568755b6109 401 Pfam PF02926 THUMP domain 36 162 2.7E-24 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BEN31_03015 acdcba7919b557cf658c1568755b6109 401 SUPERFAMILY SSF143437 3 173 2.96E-54 T 12-10-2018 BEN31_03015 acdcba7919b557cf658c1568755b6109 401 Gene3D G3DSA:3.40.50.620 175 400 1.4E-73 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_03015 acdcba7919b557cf658c1568755b6109 401 SUPERFAMILY SSF52402 174 385 3.75E-51 T 12-10-2018 BEN31_03015 acdcba7919b557cf658c1568755b6109 401 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 4.6E-142 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BEN31_03015 acdcba7919b557cf658c1568755b6109 401 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 401 167.184 T 12-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 BEN31_03015 acdcba7919b557cf658c1568755b6109 401 Gene3D G3DSA:3.30.2130.30 1 174 4.1E-62 T 12-10-2018 BEN31_03015 acdcba7919b557cf658c1568755b6109 401 SMART SM00981 74 165 5.4E-24 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 Pfam PF00288 GHMP kinases N terminal domain 87 144 7.4E-12 T 12-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 SUPERFAMILY SSF55060 161 281 9.71E-31 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 Gene3D G3DSA:3.30.70.890 162 287 7.4E-30 T 12-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 SUPERFAMILY SSF54211 3 157 1.59E-48 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 36.339 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 Gene3D G3DSA:3.30.230.10 1 159 3.2E-62 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 Pfam PF08544 GHMP kinases C terminal 197 270 5.8E-10 T 12-10-2018 IPR013750 GHMP kinase, C-terminal domain BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 PIRSF PIRSF010376 2 288 3.2E-100 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BEN31_15475 1b3b377cce7d7094bd29be27e35ddd34 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 287 1.3E-117 T 12-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 BEN31_12015 3f4fb0189165274880b90f71b47c3d2f 393 Gene3D G3DSA:1.20.1250.20 2 184 2.3E-21 T 12-10-2018 BEN31_12015 3f4fb0189165274880b90f71b47c3d2f 393 Pfam PF07690 Major Facilitator Superfamily 209 377 2.1E-24 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_12015 3f4fb0189165274880b90f71b47c3d2f 393 ProSitePatterns PS00216 Sugar transport proteins signature 1. 258 275 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_12015 3f4fb0189165274880b90f71b47c3d2f 393 SUPERFAMILY SSF103473 4 375 1.44E-49 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_12015 3f4fb0189165274880b90f71b47c3d2f 393 Gene3D G3DSA:1.20.1250.20 199 384 1.7E-23 T 12-10-2018 BEN31_15785 ad9484bb4b4cdb6763708cf42b384455 263 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 7 250 33.459 T 12-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 BEN31_15785 ad9484bb4b4cdb6763708cf42b384455 263 PRINTS PR00701 60kDa inner membrane protein signature 213 236 3.1E-15 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_15785 ad9484bb4b4cdb6763708cf42b384455 263 PRINTS PR00701 60kDa inner membrane protein signature 129 152 3.1E-15 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_15785 ad9484bb4b4cdb6763708cf42b384455 263 Pfam PF02096 60Kd inner membrane protein 64 246 3.5E-61 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_15785 ad9484bb4b4cdb6763708cf42b384455 263 PRINTS PR01900 YidC translocation/secretion protein signature 180 195 9.1E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_15785 ad9484bb4b4cdb6763708cf42b384455 263 PRINTS PR01900 YidC translocation/secretion protein signature 202 226 9.1E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_15785 ad9484bb4b4cdb6763708cf42b384455 263 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 63 246 3.4E-67 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_06140 5ffe670add63f96524cc4cab49f3e276 123 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 10 119 3.7E-32 T 12-10-2018 IPR014913 Protein of unknown function DUF1798 BEN31_06140 5ffe670add63f96524cc4cab49f3e276 123 Gene3D G3DSA:1.20.120.440 2 123 3.3E-32 T 12-10-2018 IPR023351 YppE-like superfamily BEN31_06140 5ffe670add63f96524cc4cab49f3e276 123 SUPERFAMILY SSF140415 2 122 1.44E-36 T 12-10-2018 IPR023351 YppE-like superfamily BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 401 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 420 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 377 1.7E-12 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 421 6.5E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 Gene3D G3DSA:3.30.565.10 316 426 1.2E-27 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 SUPERFAMILY SSF55874 271 421 1.7E-29 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_14280 68a6174cad7e3b9b0670415b05eafbf2 428 SMART SM00387 312 423 3.8E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_08570 80602b52afdd154a001d4274412f2653 304 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 10 301 1.2E-108 T 12-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_08570 80602b52afdd154a001d4274412f2653 304 SUPERFAMILY SSF55174 14 101 4.37E-17 T 12-10-2018 BEN31_08570 80602b52afdd154a001d4274412f2653 304 Gene3D G3DSA:3.30.2350.10 81 304 3.9E-76 T 12-10-2018 BEN31_08570 80602b52afdd154a001d4274412f2653 304 SUPERFAMILY SSF55120 73 301 2.88E-78 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_08570 80602b52afdd154a001d4274412f2653 304 SMART SM00363 15 75 1.2E-12 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_08570 80602b52afdd154a001d4274412f2653 304 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 12-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_08570 80602b52afdd154a001d4274412f2653 304 Pfam PF00849 RNA pseudouridylate synthase 88 242 1.2E-36 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_08570 80602b52afdd154a001d4274412f2653 304 Pfam PF01479 S4 domain 15 61 6.7E-14 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_08570 80602b52afdd154a001d4274412f2653 304 Gene3D G3DSA:3.10.290.10 2 69 1.7E-21 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_11750 90cbc006831df352c809f5e5d78961a0 263 Gene3D G3DSA:1.10.10.10 108 152 4.4E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11750 90cbc006831df352c809f5e5d78961a0 263 Gene3D G3DSA:1.10.10.2800 1 107 2.8E-37 T 12-10-2018 BEN31_11750 90cbc006831df352c809f5e5d78961a0 263 Gene3D G3DSA:1.10.10.10 214 263 7.1E-11 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11750 90cbc006831df352c809f5e5d78961a0 263 Gene3D G3DSA:1.10.10.10 153 213 6.4E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11750 90cbc006831df352c809f5e5d78961a0 263 Pfam PF02631 RecX family 210 261 8.3E-5 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BEN31_11750 90cbc006831df352c809f5e5d78961a0 263 Pfam PF02631 RecX family 84 204 3.0E-28 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BEN31_11750 90cbc006831df352c809f5e5d78961a0 263 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 17.293 T 12-10-2018 IPR003783 Regulatory protein RecX GO:0006282 BEN31_17320 5da55292f2acd6e6afbf2f19d2ec624a 115 Gene3D G3DSA:3.40.1580.10 7 109 3.7E-18 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BEN31_17320 5da55292f2acd6e6afbf2f19d2ec624a 115 Pfam PF14568 SMI1-KNR4 cell-wall 20 92 4.1E-11 T 12-10-2018 BEN31_17320 5da55292f2acd6e6afbf2f19d2ec624a 115 SUPERFAMILY SSF160631 9 97 4.97E-17 T 12-10-2018 BEN31_14865 78b9cfd7cd604d1271411351552d138d 171 SUPERFAMILY SSF55729 2 166 3.06E-52 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_14865 78b9cfd7cd604d1271411351552d138d 171 Gene3D G3DSA:3.40.630.30 2 168 1.3E-58 T 12-10-2018 BEN31_14865 78b9cfd7cd604d1271411351552d138d 171 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 1.2E-33 T 12-10-2018 IPR000182 GNAT domain BEN31_03770 039139bf8126fbb760c38347b10f9411 189 SUPERFAMILY SSF52972 2 182 5.04E-61 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN31_03770 039139bf8126fbb760c38347b10f9411 189 PIRSF PIRSF006305 1 188 9.9E-61 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BEN31_03770 039139bf8126fbb760c38347b10f9411 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 181 2.1E-65 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BEN31_03770 039139bf8126fbb760c38347b10f9411 189 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 31.886 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BEN31_03770 039139bf8126fbb760c38347b10f9411 189 Gene3D G3DSA:3.90.950.10 1 187 3.0E-75 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN31_03770 039139bf8126fbb760c38347b10f9411 189 Pfam PF02545 Maf-like protein 3 183 1.6E-58 T 12-10-2018 IPR003697 Maf-like protein GO:0047429 BEN31_17825 ddd49f7a7ab0b87eabf3f3bb935cc20f 144 Gene3D G3DSA:3.10.129.10 1 139 7.3E-59 T 12-10-2018 BEN31_17825 ddd49f7a7ab0b87eabf3f3bb935cc20f 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 34.533 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN31_17825 ddd49f7a7ab0b87eabf3f3bb935cc20f 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 1.6E-59 T 12-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN31_17825 ddd49f7a7ab0b87eabf3f3bb935cc20f 144 Pfam PF07977 FabA-like domain 11 134 4.6E-36 T 12-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN31_17825 ddd49f7a7ab0b87eabf3f3bb935cc20f 144 SUPERFAMILY SSF54637 1 137 3.2E-48 T 12-10-2018 IPR029069 HotDog domain superfamily BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 SUPERFAMILY SSF53271 75 309 2.62E-67 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 4.5E-26 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 Gene3D G3DSA:3.40.50.2020 13 305 1.4E-126 T 12-10-2018 BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 Gene3D G3DSA:3.40.50.2020 153 293 1.4E-126 T 12-10-2018 BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 6.6E-52 T 12-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 12-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 2.0E-130 T 12-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 SMART SM01400 10 126 3.6E-82 T 12-10-2018 BEN31_15450 14543d360aa1a0e5e92b867956bb6b78 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 317 51.08 T 12-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 Gene3D G3DSA:3.40.50.2300 159 289 1.1E-58 T 12-10-2018 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 Pfam PF13377 Periplasmic binding protein-like domain 169 329 4.9E-34 T 12-10-2018 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 Gene3D G3DSA:3.40.50.2300 63 306 1.1E-58 T 12-10-2018 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 Gene3D G3DSA:1.10.260.40 1 60 3.2E-22 T 12-10-2018 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 SUPERFAMILY SSF47413 3 60 9.38E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 SMART SM00354 2 72 2.4E-24 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 SUPERFAMILY SSF53822 63 332 5.8E-56 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_14050 a3c641c0e6e93bf2cab352fa1305ae14 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 7.0E-17 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_07580 b21f967ecdfaf953ef8973f90c0e280f 180 Gene3D G3DSA:3.40.630.30 3 173 6.8E-37 T 12-10-2018 BEN31_07580 b21f967ecdfaf953ef8973f90c0e280f 180 SUPERFAMILY SSF55729 2 150 7.5E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_07580 b21f967ecdfaf953ef8973f90c0e280f 180 Pfam PF13302 Acetyltransferase (GNAT) domain 8 140 1.1E-24 T 12-10-2018 IPR000182 GNAT domain BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 SUPERFAMILY SSF90123 5 418 1.7E-74 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 ProSitePatterns PS00211 ABC transporters family signature. 566 580 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 SMART SM00382 454 646 3.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 Gene3D G3DSA:3.40.50.300 425 670 1.4E-85 T 12-10-2018 BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 Pfam PF00664 ABC transporter transmembrane region 148 385 9.9E-44 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 Gene3D G3DSA:1.20.1560.10 132 416 8.4E-71 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 Pfam PF00005 ABC transporter 445 594 8.7E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11080 b2133a43b5d5b8dc3de4c90b7739aba7 671 SUPERFAMILY SSF52540 423 664 7.03E-84 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18290 986b16a74aed80b962c2daea23648292 506 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 440 499 6.4E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN31_18290 986b16a74aed80b962c2daea23648292 506 Pfam PF00460 Flagella basal body rod protein 8 37 2.6E-6 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN31_18290 986b16a74aed80b962c2daea23648292 506 PRINTS PR01005 Flagellar hook-associated protein signature 467 491 2.1E-5 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN31_18290 986b16a74aed80b962c2daea23648292 506 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 2.1E-5 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN31_18290 986b16a74aed80b962c2daea23648292 506 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 499 1.3E-105 T 12-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 BEN31_18290 986b16a74aed80b962c2daea23648292 506 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN31_18290 986b16a74aed80b962c2daea23648292 506 SUPERFAMILY SSF64518 139 499 6.54E-19 T 12-10-2018 BEN31_03265 e23a0139951bcba874c963e467f59432 580 SUPERFAMILY SSF55874 412 578 2.36E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03265 e23a0139951bcba874c963e467f59432 580 SUPERFAMILY SSF55785 234 348 4.19E-9 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_03265 e23a0139951bcba874c963e467f59432 580 SMART SM00388 356 423 1.8E-23 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_03265 e23a0139951bcba874c963e467f59432 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03265 e23a0139951bcba874c963e467f59432 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03265 e23a0139951bcba874c963e467f59432 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03265 e23a0139951bcba874c963e467f59432 580 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 1.2E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_03265 e23a0139951bcba874c963e467f59432 580 Pfam PF00989 PAS fold 241 347 1.1E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_03265 e23a0139951bcba874c963e467f59432 580 SMART SM00387 469 580 8.6E-40 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_03265 e23a0139951bcba874c963e467f59432 580 Gene3D G3DSA:3.30.450.20 226 351 1.2E-15 T 12-10-2018 BEN31_03265 e23a0139951bcba874c963e467f59432 580 Gene3D G3DSA:3.30.565.10 426 577 7.8E-51 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03265 e23a0139951bcba874c963e467f59432 580 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 578 7.3E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_03265 e23a0139951bcba874c963e467f59432 580 Pfam PF16736 Single Cache-like 34 145 2.2E-36 T 12-10-2018 IPR031967 PhoR, single Cache-like domain BEN31_03265 e23a0139951bcba874c963e467f59432 580 Pfam PF00512 His Kinase A (phospho-acceptor) domain 356 422 3.5E-20 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_03265 e23a0139951bcba874c963e467f59432 580 Gene3D G3DSA:3.30.450.20 33 156 2.0E-9 T 12-10-2018 BEN31_03265 e23a0139951bcba874c963e467f59432 580 SUPERFAMILY SSF47384 342 423 1.67E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_03265 e23a0139951bcba874c963e467f59432 580 Gene3D G3DSA:1.10.287.130 352 425 8.1E-27 T 12-10-2018 BEN31_03265 e23a0139951bcba874c963e467f59432 580 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 238 356 3.5E-7 T 12-10-2018 IPR000014 PAS domain BEN31_09565 014fd519b0585d4763a704172c361835 251 SUPERFAMILY SSF88946 25 104 9.58E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_09565 014fd519b0585d4763a704172c361835 251 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 17 247 28.976 T 12-10-2018 IPR014244 RNA polymerase sigma-I type BEN31_09565 014fd519b0585d4763a704172c361835 251 Gene3D G3DSA:1.10.1740.10 22 103 6.8E-10 T 12-10-2018 BEN31_09565 014fd519b0585d4763a704172c361835 251 PIRSF PIRSF038953 8 251 1.0E-67 T 12-10-2018 IPR014244 RNA polymerase sigma-I type BEN31_09565 014fd519b0585d4763a704172c361835 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 229 7.5E-14 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_09565 014fd519b0585d4763a704172c361835 251 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 24 245 1.3E-85 T 12-10-2018 IPR014244 RNA polymerase sigma-I type BEN31_09565 014fd519b0585d4763a704172c361835 251 Pfam PF04542 Sigma-70 region 2 36 106 1.3E-11 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 Gene3D G3DSA:3.40.50.300 441 613 6.3E-57 T 12-10-2018 BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 Pfam PF00270 DEAD/DEAH box helicase 258 415 7.3E-20 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 SUPERFAMILY SSF52540 173 436 5.34E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 Gene3D G3DSA:3.40.50.300 196 434 3.9E-91 T 12-10-2018 BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 SUPERFAMILY SSF52540 369 629 1.3E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 Pfam PF17191 RecG wedge domain 10 165 5.6E-17 T 12-10-2018 IPR033454 RecG, wedge domain BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 648 2.7E-255 T 12-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 Pfam PF00271 Helicase conserved C-terminal domain 452 572 8.5E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 Gene3D G3DSA:2.40.50.140 46 138 2.8E-9 T 12-10-2018 BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 SMART SM00487 253 442 8.9E-36 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 SMART SM00490 488 573 1.5E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_08365 44d0c1f86a6894f13fee368eab8bb3ab 682 SUPERFAMILY SSF50249 3 168 2.06E-30 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 646 0.0 T 12-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 501 5.1E-148 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 12-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 47 555 8.9E-203 T 12-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 2.0E-104 T 12-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 Gene3D G3DSA:1.20.210.10 30 561 3.0E-200 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17055 8f4899fec594cebfb4c2e2fca516e642 652 SUPERFAMILY SSF81442 44 555 1.11E-177 T 12-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_04575 04eb22cfe39167a8afba0f078009a616 311 SUPERFAMILY SSF53335 89 310 3.88E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_04575 04eb22cfe39167a8afba0f078009a616 311 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 2.8E-108 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BEN31_04575 04eb22cfe39167a8afba0f078009a616 311 Gene3D G3DSA:3.40.50.150 116 311 5.6E-62 T 12-10-2018 BEN31_04575 04eb22cfe39167a8afba0f078009a616 311 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.518 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BEN31_04575 04eb22cfe39167a8afba0f078009a616 311 PIRSF PIRSF000401 1 311 1.1E-108 T 12-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 BEN31_04575 04eb22cfe39167a8afba0f078009a616 311 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 2.3E-107 T 12-10-2018 BEN31_03550 4e1669d53564d6e8b2cfd6cf485a2780 146 SUPERFAMILY SSF46785 11 144 2.4E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03550 4e1669d53564d6e8b2cfd6cf485a2780 146 Gene3D G3DSA:1.10.10.10 2 146 4.1E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03550 4e1669d53564d6e8b2cfd6cf485a2780 146 Pfam PF01047 MarR family 36 94 1.4E-19 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_03550 4e1669d53564d6e8b2cfd6cf485a2780 146 SMART SM00347 29 129 4.5E-25 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_03550 4e1669d53564d6e8b2cfd6cf485a2780 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 7.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_03550 4e1669d53564d6e8b2cfd6cf485a2780 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 7.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_03550 4e1669d53564d6e8b2cfd6cf485a2780 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 7.7E-9 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_16790 2414e0a5f788fc723a9df36f3ecb7471 250 Gene3D G3DSA:2.40.260.10 29 248 1.5E-73 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_16790 2414e0a5f788fc723a9df36f3ecb7471 250 TIGRFAM TIGR03064 sortase_srtB: sortase, SrtB family 6 242 2.7E-81 T 12-10-2018 IPR009835 Sortase B family BEN31_16790 2414e0a5f788fc723a9df36f3ecb7471 250 SUPERFAMILY SSF63817 16 246 4.97E-68 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_16790 2414e0a5f788fc723a9df36f3ecb7471 250 Pfam PF04203 Sortase family 82 246 1.7E-19 T 12-10-2018 IPR005754 Sortase family BEN31_16790 2414e0a5f788fc723a9df36f3ecb7471 250 PIRSF PIRSF030150 2 248 2.5E-89 T 12-10-2018 IPR015986 Sortase B, Firmicutes BEN31_12405 5411fc5f42f726ff5376c24952a2be73 317 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 302 1.1E-45 T 12-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain BEN31_12405 5411fc5f42f726ff5376c24952a2be73 317 SUPERFAMILY SSF53590 1 309 3.79E-79 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like BEN31_12405 5411fc5f42f726ff5376c24952a2be73 317 Gene3D G3DSA:3.90.245.10 2 313 1.9E-94 T 12-10-2018 IPR036452 Ribonucleoside hydrolase-like BEN31_16245 e4dccb2d0b1602879bb987edf628df0b 300 SUPERFAMILY SSF53223 7 112 3.28E-32 T 12-10-2018 BEN31_16245 e4dccb2d0b1602879bb987edf628df0b 300 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 13 296 31.486 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN31_16245 e4dccb2d0b1602879bb987edf628df0b 300 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 18 100 9.4E-24 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN31_16245 e4dccb2d0b1602879bb987edf628df0b 300 Gene3D G3DSA:3.40.50.720 114 268 9.6E-88 T 12-10-2018 BEN31_16245 e4dccb2d0b1602879bb987edf628df0b 300 Gene3D G3DSA:3.40.50.10860 17 284 9.6E-88 T 12-10-2018 BEN31_16245 e4dccb2d0b1602879bb987edf628df0b 300 SUPERFAMILY SSF51735 113 296 5.37E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 SMART SM00116 318 366 2.3E-9 T 12-10-2018 IPR000644 CBS domain BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 SMART SM00116 258 306 4.6E-6 T 12-10-2018 IPR000644 CBS domain BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 Pfam PF00005 ABC transporter 18 163 6.8E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 Gene3D G3DSA:3.40.50.300 1 240 2.1E-76 T 12-10-2018 BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 Gene3D G3DSA:3.10.580.10 247 372 1.5E-34 T 12-10-2018 BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 Pfam PF00571 CBS domain 311 364 3.0E-6 T 12-10-2018 IPR000644 CBS domain BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 Pfam PF00571 CBS domain 251 298 9.3E-9 T 12-10-2018 IPR000644 CBS domain BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 12 371 1.7E-173 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 SUPERFAMILY SSF54631 250 369 2.65E-24 T 12-10-2018 BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 SUPERFAMILY SSF52540 1 240 1.52E-79 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00650 83900c7dd09139bc46fb42e0df537b8c 382 SMART SM00382 27 213 4.2E-21 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12225 6f5457422024ca2adf1af8f7ecc21e4d 380 SMART SM00490 255 335 4.1E-22 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_12225 6f5457422024ca2adf1af8f7ecc21e4d 380 SMART SM00487 23 218 2.8E-51 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_12225 6f5457422024ca2adf1af8f7ecc21e4d 380 Gene3D G3DSA:3.40.50.300 2 208 1.4E-61 T 12-10-2018 BEN31_12225 6f5457422024ca2adf1af8f7ecc21e4d 380 SUPERFAMILY SSF52540 72 355 2.41E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12225 6f5457422024ca2adf1af8f7ecc21e4d 380 Pfam PF00271 Helicase conserved C-terminal domain 230 335 3.3E-22 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_12225 6f5457422024ca2adf1af8f7ecc21e4d 380 Gene3D G3DSA:3.40.50.300 209 379 1.8E-38 T 12-10-2018 BEN31_12225 6f5457422024ca2adf1af8f7ecc21e4d 380 Pfam PF00270 DEAD/DEAH box helicase 28 193 7.8E-44 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_10885 f3ff438840ae7bc206964c9496a107f9 352 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 8 344 46.977 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN31_10885 f3ff438840ae7bc206964c9496a107f9 352 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 8 343 9.3E-123 T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN31_10885 f3ff438840ae7bc206964c9496a107f9 352 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 341 1.7E-128 T 12-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN31_10885 f3ff438840ae7bc206964c9496a107f9 352 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN31_10885 f3ff438840ae7bc206964c9496a107f9 352 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 12-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 BEN31_10885 f3ff438840ae7bc206964c9496a107f9 352 Gene3D G3DSA:3.20.20.210 1 352 8.8E-150 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_10885 f3ff438840ae7bc206964c9496a107f9 352 SUPERFAMILY SSF51726 6 346 4.19E-105 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 Pfam PF02779 Transketolase, pyrimidine binding domain 316 477 5.2E-39 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 SUPERFAMILY SSF52518 7 378 1.33E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 SUPERFAMILY SSF52922 489 623 3.66E-33 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 SUPERFAMILY SSF52518 316 503 2.88E-55 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 SMART SM00861 316 481 3.2E-64 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 2.1E-114 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 Pfam PF02780 Transketolase, C-terminal domain 493 615 5.4E-33 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 Gene3D G3DSA:3.40.50.970 313 489 6.8E-66 T 12-10-2018 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 623 4.4E-301 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 Gene3D G3DSA:3.40.50.920 493 627 1.5E-40 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.836 T 12-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_05160 4d7159a2b6fab8718f85b0050932b4ed 633 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Gene3D G3DSA:3.40.50.300 220 333 8.2E-26 T 12-10-2018 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 SMART SM01086 358 452 1.5E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Gene3D G3DSA:3.40.50.300 4 182 9.0E-35 T 12-10-2018 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Pfam PF07724 AAA domain (Cdc48 subfamily) 214 352 2.3E-41 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 358 428 1.3E-8 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 466 3.7E-220 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 466 44.18 T 12-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Gene3D G3DSA:1.10.8.60 358 463 5.5E-41 T 12-10-2018 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 SUPERFAMILY SSF52540 6 464 6.23E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 110 5.0E-7 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 Gene3D G3DSA:1.10.8.10 250 270 8.2E-26 T 12-10-2018 BEN31_08225 c17dc7921c20e090bd7fe27de58495f1 466 SMART SM00382 51 359 2.5E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13510 f869c444308480d19935b451afe07bee 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 321 9.8E-37 T 12-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 BEN31_13510 f869c444308480d19935b451afe07bee 573 SUPERFAMILY SSF52518 4 177 3.04E-41 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_13510 f869c444308480d19935b451afe07bee 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 3.8E-43 T 12-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 BEN31_13510 f869c444308480d19935b451afe07bee 573 SUPERFAMILY SSF52518 358 562 1.79E-61 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_13510 f869c444308480d19935b451afe07bee 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 526 1.4E-42 T 12-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 BEN31_13510 f869c444308480d19935b451afe07bee 573 Gene3D G3DSA:3.40.50.970 348 568 2.2E-60 T 12-10-2018 BEN31_13510 f869c444308480d19935b451afe07bee 573 SUPERFAMILY SSF52467 187 349 1.55E-47 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN31_13510 f869c444308480d19935b451afe07bee 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 12-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 BEN31_13510 f869c444308480d19935b451afe07bee 573 Gene3D G3DSA:3.40.50.1220 183 335 8.9E-51 T 12-10-2018 BEN31_13510 f869c444308480d19935b451afe07bee 573 Gene3D G3DSA:3.40.50.970 2 182 8.6E-57 T 12-10-2018 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 334 3.3E-140 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 3.2E-45 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 Gene3D G3DSA:3.40.50.1440 6 220 1.1E-84 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 SUPERFAMILY SSF55307 204 315 6.41E-43 T 12-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 SMART SM00865 207 324 1.5E-53 T 12-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 Pfam PF12327 FtsZ family, C-terminal domain 222 315 7.6E-32 T 12-10-2018 IPR024757 Cell division protein FtsZ, C-terminal BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 370 39.526 T 12-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 12-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 SMART SM00864 13 205 5.9E-119 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 SUPERFAMILY SSF52490 13 208 1.57E-73 T 12-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 Gene3D G3DSA:3.30.1330.20 221 328 2.1E-41 T 12-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.3E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.3E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.3E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN31_08680 ca5b2e25a60b5bfe426ea640ae4df90b 381 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.3E-52 T 12-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 7.8E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 7.8E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 7.8E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 7.8E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 7.8E-38 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 SUPERFAMILY SSF52096 29 284 1.31E-78 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 7 283 9.7E-131 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 Pfam PF01039 Carboxyl transferase domain 63 242 5.5E-18 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 Gene3D G3DSA:3.90.226.10 29 283 1.4E-86 T 12-10-2018 BEN31_03210 0405b27623621af1f0f2e15244e190ef 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 4 282 38.523 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_06925 a7a0f5b38af37be492428e94d3cebd4a 76 Pfam PF12728 Helix-turn-helix domain 2 46 2.2E-6 T 12-10-2018 BEN31_06925 a7a0f5b38af37be492428e94d3cebd4a 76 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 50 8.7E-13 T 12-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 Gene3D G3DSA:3.40.50.300 2 237 5.0E-56 T 12-10-2018 BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 SUPERFAMILY SSF52540 256 490 2.83E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 Gene3D G3DSA:3.40.50.300 253 509 2.2E-40 T 12-10-2018 BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 SUPERFAMILY SSF52540 3 226 1.66E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 SMART SM00382 29 225 7.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 Pfam PF00005 ABC transporter 21 169 4.1E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_01840 1b8ab4521dcc8e7a768467487c9425c7 511 Pfam PF00005 ABC transporter 274 429 2.4E-18 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_01745 1c75850bdcd87ea81b193b8e7f2d7e43 489 Gene3D G3DSA:3.20.140.10 12 471 5.4E-203 T 12-10-2018 BEN31_01745 1c75850bdcd87ea81b193b8e7f2d7e43 489 PIRSF PIRSF000484 6 481 2.5E-151 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BEN31_01745 1c75850bdcd87ea81b193b8e7f2d7e43 489 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 159 347 2.8E-13 T 12-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 BEN31_01745 1c75850bdcd87ea81b193b8e7f2d7e43 489 SUPERFAMILY SSF51690 141 479 1.77E-129 T 12-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 BEN31_01745 1c75850bdcd87ea81b193b8e7f2d7e43 489 SUPERFAMILY SSF54675 9 140 2.36E-48 T 12-10-2018 BEN31_01745 1c75850bdcd87ea81b193b8e7f2d7e43 489 Gene3D G3DSA:3.20.20.70 153 320 5.4E-203 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_01745 1c75850bdcd87ea81b193b8e7f2d7e43 489 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 466 4.9E-176 T 12-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 BEN31_13135 991e1a21945cb94b083741b9d3340734 254 Pfam PF13411 MerR HTH family regulatory protein 6 72 2.6E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_13135 991e1a21945cb94b083741b9d3340734 254 SUPERFAMILY SSF46955 8 111 2.12E-20 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_13135 991e1a21945cb94b083741b9d3340734 254 SMART SM00422 3 73 5.9E-8 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_13135 991e1a21945cb94b083741b9d3340734 254 Gene3D G3DSA:1.10.1660.10 5 131 8.4E-23 T 12-10-2018 BEN31_01915 2edd308b54e23784c1e706e554e1b35d 166 Pfam PF01037 Lrp/AsnC ligand binding domain 73 145 2.1E-15 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN31_01915 2edd308b54e23784c1e706e554e1b35d 166 Gene3D G3DSA:1.10.10.10 3 53 1.4E-7 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_01915 2edd308b54e23784c1e706e554e1b35d 166 SUPERFAMILY SSF54909 66 147 2.68E-18 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_01915 2edd308b54e23784c1e706e554e1b35d 166 SUPERFAMILY SSF46785 3 61 6.94E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_01915 2edd308b54e23784c1e706e554e1b35d 166 SMART SM00344 3 114 2.1E-5 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN31_01915 2edd308b54e23784c1e706e554e1b35d 166 Gene3D G3DSA:3.30.70.920 55 153 2.3E-21 T 12-10-2018 BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 7 303 5.0E-138 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 Pfam PF02610 L-arabinose isomerase 5 357 2.0E-166 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 SUPERFAMILY SSF50443 327 473 5.49E-55 T 12-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 Hamap MF_00519 L-arabinose isomerase [araA]. 1 473 58.592 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 SUPERFAMILY SSF53743 1 327 2.25E-120 T 12-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 Gene3D G3DSA:3.40.50.10940 1 175 3.7E-84 T 12-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 PIRSF PIRSF001478 1 473 2.8E-229 T 12-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 BEN31_04320 b5bddb8f767f1969c70a64c6a6da92b3 473 Pfam PF11762 L-arabinose isomerase C-terminal domain 360 472 1.0E-41 T 12-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 BEN31_08340 20eb19143cf4b2f274abc90268a7ad47 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 55 76 7.0E-5 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BEN31_08340 20eb19143cf4b2f274abc90268a7ad47 77 Pfam PF00550 Phosphopantetheine attachment site 7 73 1.9E-14 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_08340 20eb19143cf4b2f274abc90268a7ad47 77 SUPERFAMILY SSF47336 2 76 4.32E-23 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_08340 20eb19143cf4b2f274abc90268a7ad47 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 77 2.6E-35 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BEN31_08340 20eb19143cf4b2f274abc90268a7ad47 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.757 T 12-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 BEN31_08340 20eb19143cf4b2f274abc90268a7ad47 77 Gene3D G3DSA:1.10.1200.10 1 77 6.0E-29 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_08340 20eb19143cf4b2f274abc90268a7ad47 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 12-10-2018 IPR006162 Phosphopantetheine attachment site BEN31_16170 369a30cf9596cd14b527f33cb4ee36bb 282 Gene3D G3DSA:3.60.15.10 11 242 1.9E-35 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_16170 369a30cf9596cd14b527f33cb4ee36bb 282 SUPERFAMILY SSF56281 26 241 4.98E-37 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_16170 369a30cf9596cd14b527f33cb4ee36bb 282 SMART SM00849 23 222 5.0E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_16170 369a30cf9596cd14b527f33cb4ee36bb 282 Pfam PF00753 Metallo-beta-lactamase superfamily 28 222 4.8E-18 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_08485 51ef53721e5b2bafffb376af438cbeed 167 Pfam PF13241 Putative NAD(P)-binding 6 111 3.1E-26 T 12-10-2018 BEN31_08485 51ef53721e5b2bafffb376af438cbeed 167 SUPERFAMILY SSF75615 105 161 7.19E-9 T 12-10-2018 BEN31_08485 51ef53721e5b2bafffb376af438cbeed 167 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 147 2.6E-30 T 12-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 BEN31_08485 51ef53721e5b2bafffb376af438cbeed 167 Gene3D G3DSA:3.40.50.720 1 127 1.9E-37 T 12-10-2018 BEN31_08485 51ef53721e5b2bafffb376af438cbeed 167 SUPERFAMILY SSF51735 1 100 3.16E-20 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Pfam PF00364 Biotin-requiring enzyme 4 76 1.7E-11 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Gene3D G3DSA:4.10.320.10 110 164 2.1E-16 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 SUPERFAMILY SSF47005 161 206 1.44E-9 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Gene3D G3DSA:2.40.50.100 1 103 1.0E-24 T 12-10-2018 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 SMART SM01059 229 429 0.0033 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 SUPERFAMILY SSF51230 1 93 1.57E-22 T 12-10-2018 IPR011053 Single hybrid motif BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 SUPERFAMILY SSF47005 116 161 4.05E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 SUPERFAMILY SSF52777 212 440 1.07E-82 T 12-10-2018 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Gene3D G3DSA:3.30.559.10 202 437 1.6E-89 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 213 440 3.2E-85 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Pfam PF02817 e3 binding domain 169 201 5.9E-10 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Pfam PF02817 e3 binding domain 122 157 7.0E-13 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN31_09845 044e9e7544a849b0e776ace61dfa5c17 440 Gene3D G3DSA:4.10.320.10 166 201 6.3E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_17900 cf1394eaf78c579cbe073280b53b86f4 200 Gene3D G3DSA:2.30.110.10 1 200 4.7E-61 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN31_17900 cf1394eaf78c579cbe073280b53b86f4 200 SMART SM00903 15 172 1.0E-25 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BEN31_17900 cf1394eaf78c579cbe073280b53b86f4 200 SUPERFAMILY SSF50475 2 191 1.23E-39 T 12-10-2018 BEN31_17900 cf1394eaf78c579cbe073280b53b86f4 200 Pfam PF01613 Flavin reductase like domain 18 164 1.0E-17 T 12-10-2018 IPR002563 Flavin reductase like domain GO:0010181 BEN31_13785 1afe88f2fd5e26d8ac4d73f7952448c0 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 219 1.1E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_13785 1afe88f2fd5e26d8ac4d73f7952448c0 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 113 1.0E-23 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_13785 1afe88f2fd5e26d8ac4d73f7952448c0 224 SUPERFAMILY SSF161098 14 204 2.75E-45 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_13785 1afe88f2fd5e26d8ac4d73f7952448c0 224 Gene3D G3DSA:1.10.3720.10 2 221 1.7E-60 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 SMART SM01134 71 231 5.5E-59 T 12-10-2018 BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 8.4E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 8.4E-7 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 SUPERFAMILY SSF46785 4 59 2.95E-10 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 1.4E-18 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 Pfam PF00455 DeoR C terminal sensor domain 74 229 3.1E-45 T 12-10-2018 IPR014036 DeoR C-terminal sensor domain BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 SUPERFAMILY SSF100950 72 231 1.26E-30 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 Gene3D G3DSA:1.10.10.10 1 54 3.1E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 12-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 BEN31_06970 ef85e9113fb7d704adff35059e5d0fe1 256 SMART SM00420 6 58 2.1E-19 T 12-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 BEN31_18665 c54ebb5519dc143bc6dcceb52c3824a2 540 Pfam PF01740 STAS domain 434 534 2.5E-20 T 12-10-2018 IPR002645 STAS domain BEN31_18665 c54ebb5519dc143bc6dcceb52c3824a2 540 Pfam PF00916 Sulfate permease family 15 379 2.0E-96 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BEN31_18665 c54ebb5519dc143bc6dcceb52c3824a2 540 SUPERFAMILY SSF52091 433 528 2.55E-19 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_18665 c54ebb5519dc143bc6dcceb52c3824a2 540 TIGRFAM TIGR00815 sulP: sulfate permease 7 533 1.4E-114 T 12-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 BEN31_18665 c54ebb5519dc143bc6dcceb52c3824a2 540 Gene3D G3DSA:3.30.750.24 418 536 1.2E-26 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 1.8E-141 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 SMART SM01230 105 354 1.4E-140 T 12-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 361 373 - T 12-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 12-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 12-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 Gene3D G3DSA:3.10.20.70 2 107 2.6E-46 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 441 1.8E-190 T 12-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 SUPERFAMILY SSF55931 105 442 3.63E-130 T 12-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 99 1.4E-33 T 12-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 SUPERFAMILY SSF54368 5 104 1.44E-35 T 12-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 BEN31_07605 672d76919c0b583ace7ac47adf80aa99 444 Gene3D G3DSA:3.30.590.10 108 444 5.0E-149 T 12-10-2018 BEN31_01160 aa4ce57b986acfdbeef186bbf0762362 478 Gene3D G3DSA:1.10.2020.10 46 136 1.0E-197 T 12-10-2018 BEN31_01160 aa4ce57b986acfdbeef186bbf0762362 478 SUPERFAMILY SSF51556 3 464 2.09E-181 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_01160 aa4ce57b986acfdbeef186bbf0762362 478 Gene3D G3DSA:3.20.20.140 7 463 1.0E-197 T 12-10-2018 BEN31_01160 aa4ce57b986acfdbeef186bbf0762362 478 Pfam PF02614 Glucuronate isomerase 1 463 6.1E-230 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BEN31_01160 aa4ce57b986acfdbeef186bbf0762362 478 Hamap MF_00675 Uronate isomerase [uxaC]. 2 465 50.354 T 12-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 BEN31_15145 e9492ffb15b4df83d2c1a943710797a7 143 PIRSF PIRSF005520 1 139 2.6E-53 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family BEN31_15145 e9492ffb15b4df83d2c1a943710797a7 143 Gene3D G3DSA:1.10.1520.10 4 143 1.4E-52 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BEN31_15145 e9492ffb15b4df83d2c1a943710797a7 143 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 7 133 29.548 T 12-10-2018 IPR008226 Mini-ribonuclease 3 family BEN31_15145 e9492ffb15b4df83d2c1a943710797a7 143 SUPERFAMILY SSF69065 9 130 6.63E-42 T 12-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 BEN31_15145 e9492ffb15b4df83d2c1a943710797a7 143 SMART SM00535 1 134 1.9E-14 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN31_15145 e9492ffb15b4df83d2c1a943710797a7 143 Pfam PF00636 Ribonuclease III domain 17 116 3.5E-17 T 12-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 BEN31_17275 ae1f85f83064256afa60a71d051be434 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 12-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site BEN31_17275 ae1f85f83064256afa60a71d051be434 159 Pfam PF01037 Lrp/AsnC ligand binding domain 70 136 4.1E-10 T 12-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain BEN31_17275 ae1f85f83064256afa60a71d051be434 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 6.3E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_17275 ae1f85f83064256afa60a71d051be434 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 6.3E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_17275 ae1f85f83064256afa60a71d051be434 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 6.3E-15 T 12-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 BEN31_17275 ae1f85f83064256afa60a71d051be434 159 SUPERFAMILY SSF46785 3 62 7.08E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_17275 ae1f85f83064256afa60a71d051be434 159 SMART SM00344 3 109 2.5E-32 T 12-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 BEN31_17275 ae1f85f83064256afa60a71d051be434 159 Gene3D G3DSA:3.30.70.920 55 140 5.8E-18 T 12-10-2018 BEN31_17275 ae1f85f83064256afa60a71d051be434 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 50 6.7E-17 T 12-10-2018 BEN31_17275 ae1f85f83064256afa60a71d051be434 159 SUPERFAMILY SSF54909 67 136 3.89E-12 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_17275 ae1f85f83064256afa60a71d051be434 159 Gene3D G3DSA:1.10.10.10 1 54 5.0E-21 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14005 7627ad3e74eff6b4ba2d98a671f1abe5 305 PIRSF PIRSF000196 1 305 6.9E-126 T 12-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 BEN31_14005 7627ad3e74eff6b4ba2d98a671f1abe5 305 Gene3D G3DSA:3.20.20.530 21 305 5.6E-92 T 12-10-2018 BEN31_14005 7627ad3e74eff6b4ba2d98a671f1abe5 305 Pfam PF01619 Proline dehydrogenase 45 294 6.4E-33 T 12-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 BEN31_14005 7627ad3e74eff6b4ba2d98a671f1abe5 305 SUPERFAMILY SSF51730 37 300 4.32E-71 T 12-10-2018 IPR029041 FAD-linked oxidoreductase-like BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 SUPERFAMILY SSF118215 8 404 6.93E-123 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 298 321 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 Gene3D G3DSA:1.10.3860.10 1 419 3.0E-138 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 225 244 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 1.7E-47 T 12-10-2018 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 7.1E-127 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN31_10855 30e472830bb3dc2c98b88395da3f4723 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_13165 8556d028f2e169717620f81b334c66f6 243 SUPERFAMILY SSF49899 34 242 3.17E-59 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN31_13165 8556d028f2e169717620f81b334c66f6 243 Gene3D G3DSA:2.60.120.200 25 112 3.2E-20 T 12-10-2018 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 Gene3D G3DSA:2.60.120.200 114 243 3.5E-50 T 12-10-2018 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 185 202 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 131 146 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 205 227 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 147 160 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 91 109 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 110 126 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 165 182 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 229 241 3.4E-79 T 12-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 134 144 - T 12-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 BEN31_13165 8556d028f2e169717620f81b334c66f6 243 Pfam PF00722 Glycosyl hydrolases family 16 56 237 6.0E-45 T 12-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 Pfam PF07730 Histidine kinase 184 248 1.8E-17 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 Pfam PF13185 GAF domain 26 168 2.4E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 285 374 4.7E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 SMART SM00065 26 177 6.5E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 Gene3D G3DSA:3.30.565.10 243 379 7.7E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 SUPERFAMILY SSF55874 253 372 1.44E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 Gene3D G3DSA:3.30.450.40 2 180 6.2E-22 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_11220 5980af76659dfbdd0bde7b71aa1ac227 381 SUPERFAMILY SSF55781 29 172 2.18E-18 T 12-10-2018 BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 269 1.4E-129 T 12-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 1.5E-30 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 Gene3D G3DSA:1.10.10.10 1 73 1.1E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 Pfam PF00156 Phosphoribosyl transferase domain 108 261 3.6E-23 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 9 74 2.0E-30 T 12-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 SUPERFAMILY SSF46785 2 73 5.17E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 SUPERFAMILY SSF53271 93 264 6.25E-41 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_15470 aff3a9671a5eec263a49c8bef8eff537 277 Gene3D G3DSA:3.40.50.2020 75 274 5.6E-61 T 12-10-2018 BEN31_15355 2cb55f37701c98371e6e5adeb32716d1 179 Pfam PF00156 Phosphoribosyl transferase domain 14 159 7.3E-25 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_15355 2cb55f37701c98371e6e5adeb32716d1 179 SUPERFAMILY SSF53271 3 178 8.52E-59 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_15355 2cb55f37701c98371e6e5adeb32716d1 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 173 3.3E-69 T 12-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 BEN31_15355 2cb55f37701c98371e6e5adeb32716d1 179 Gene3D G3DSA:3.40.50.2020 1 179 3.6E-66 T 12-10-2018 BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 76 90 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 SUPERFAMILY SSF50129 4 200 3.74E-57 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 Pfam PF00107 Zinc-binding dehydrogenase 206 275 6.4E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 Gene3D G3DSA:3.40.50.720 187 350 2.0E-134 T 12-10-2018 BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 SUPERFAMILY SSF51735 172 362 1.78E-64 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 Gene3D G3DSA:3.90.180.10 44 387 2.0E-134 T 12-10-2018 BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 TIGRFAM TIGR02819 fdhA_non_GSH: formaldehyde dehydrogenase, glutathione-independent 2 402 1.8E-232 T 12-10-2018 IPR014184 Formaldehyde dehydrogenase, glutathione-independent GO:0016491|GO:0055114 BEN31_04200 832fdd8d3833d4bc868c65bc3aff0c06 404 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 44 153 8.0E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_05735 d3b660d566b56016e4b7f66de028147d 215 Gene3D G3DSA:3.10.350.10 166 215 1.5E-14 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_05735 d3b660d566b56016e4b7f66de028147d 215 Gene3D G3DSA:2.70.70.10 19 162 3.2E-40 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_05735 d3b660d566b56016e4b7f66de028147d 215 SUPERFAMILY SSF51261 23 150 9.03E-44 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_05735 d3b660d566b56016e4b7f66de028147d 215 Pfam PF01476 LysM domain 171 212 2.9E-10 T 12-10-2018 IPR018392 LysM domain BEN31_05735 d3b660d566b56016e4b7f66de028147d 215 SUPERFAMILY SSF54106 170 212 1.19E-10 T 12-10-2018 BEN31_05735 d3b660d566b56016e4b7f66de028147d 215 SMART SM00257 170 213 1.6E-10 T 12-10-2018 IPR018392 LysM domain BEN31_05735 d3b660d566b56016e4b7f66de028147d 215 Pfam PF01551 Peptidase family M23 47 141 5.4E-32 T 12-10-2018 IPR016047 Peptidase M23 BEN31_06945 2ab41743e7b49671e498e28084f785ed 495 PIRSF PIRSF005690 2 484 7.0E-143 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_06945 2ab41743e7b49671e498e28084f785ed 495 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 19 469 2.3E-151 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_10740 458a7832bc907826f5a383f3a46c8f2e 318 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 89 238 1.5E-35 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_10740 458a7832bc907826f5a383f3a46c8f2e 318 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 90 238 2.4E-39 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_10740 458a7832bc907826f5a383f3a46c8f2e 318 Gene3D G3DSA:1.10.260.150 53 318 1.4E-76 T 12-10-2018 BEN31_08390 50f70d91c057b368320a34750aeb54bf 62 Pfam PF00830 Ribosomal L28 family 3 58 2.4E-21 T 12-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08390 50f70d91c057b368320a34750aeb54bf 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 4.9E-23 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08390 50f70d91c057b368320a34750aeb54bf 62 SUPERFAMILY SSF143800 1 60 1.08E-23 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08390 50f70d91c057b368320a34750aeb54bf 62 Gene3D G3DSA:2.30.170.40 19 62 7.0E-19 T 12-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08390 50f70d91c057b368320a34750aeb54bf 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.981 T 12-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 455 5.6E-188 T 12-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 SUPERFAMILY SSF55604 6 79 2.35E-20 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 115 1.6E-17 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 Gene3D G3DSA:3.30.1360.60 1 77 1.7E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 Pfam PF02378 Phosphotransferase system, EIIC 114 398 7.0E-55 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 157 443 7.2E-93 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_17110 57222c8dcf2a6c402b7f04b3e5f1a9e3 462 Pfam PF00367 phosphotransferase system, EIIB 9 41 3.4E-14 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_13480 c7b2ef76d860567899a61cf9ab4442a6 189 Gene3D G3DSA:3.40.630.30 2 174 5.3E-52 T 12-10-2018 BEN31_13480 c7b2ef76d860567899a61cf9ab4442a6 189 SUPERFAMILY SSF55729 2 173 3.6E-48 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_13480 c7b2ef76d860567899a61cf9ab4442a6 189 Pfam PF13302 Acetyltransferase (GNAT) domain 11 148 2.6E-25 T 12-10-2018 IPR000182 GNAT domain BEN31_11125 c22cc96fdf4c671d1c250703707cb7c0 121 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 112 2.4E-20 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN31_11125 c22cc96fdf4c671d1c250703707cb7c0 121 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 118 16.133 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN31_11125 c22cc96fdf4c671d1c250703707cb7c0 121 TIGRFAM TIGR00494 crcB: protein CrcB 6 111 4.0E-25 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 6.1E-26 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 6.1E-26 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 6.1E-26 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.1E-26 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 Gene3D G3DSA:1.20.200.10 93 348 2.6E-101 T 12-10-2018 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.3E-183 T 12-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 1.9E-24 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 Pfam PF00206 Lyase 6 286 5.6E-80 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 SMART SM00998 349 429 9.9E-40 T 12-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 Gene3D G3DSA:1.10.275.10 1 92 5.2E-39 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 Gene3D G3DSA:1.10.40.30 349 431 3.0E-34 T 12-10-2018 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 SUPERFAMILY SSF48557 3 427 8.17E-139 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 2.9E-10 T 12-10-2018 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 2.9E-10 T 12-10-2018 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 2.9E-10 T 12-10-2018 BEN31_12655 11bdfef276d50fb4932276a3bdb05d27 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 2.9E-10 T 12-10-2018 BEN31_18435 343eafc1c4e7c70a3a6cf6706b221623 228 Pfam PF00072 Response regulator receiver domain 7 116 3.7E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_18435 343eafc1c4e7c70a3a6cf6706b221623 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 4.0E-24 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_18435 343eafc1c4e7c70a3a6cf6706b221623 228 SMART SM00448 5 115 6.4E-50 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_18435 343eafc1c4e7c70a3a6cf6706b221623 228 Gene3D G3DSA:3.40.50.2300 1 129 1.8E-43 T 12-10-2018 BEN31_18435 343eafc1c4e7c70a3a6cf6706b221623 228 SUPERFAMILY SSF52172 4 184 2.85E-48 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_18435 343eafc1c4e7c70a3a6cf6706b221623 228 SMART SM00862 150 224 3.2E-26 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_18435 343eafc1c4e7c70a3a6cf6706b221623 228 Gene3D G3DSA:1.10.10.10 130 228 1.1E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 SMART SM00487 13 196 1.5E-21 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 Pfam PF00271 Helicase conserved C-terminal domain 229 323 1.5E-16 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 SUPERFAMILY SSF52540 57 346 1.12E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 Gene3D G3DSA:3.40.50.300 1 199 1.6E-68 T 12-10-2018 BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 SMART SM00490 242 324 1.2E-24 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 Pfam PF00270 DEAD/DEAH box helicase 21 180 1.8E-18 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 131 140 - T 12-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site BEN31_05760 5789ee11fc0e6b92cbf14e9991ad5bf3 502 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 368 1.9E-106 T 12-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 BEN31_06810 623f6afd3726008458d624b2d31113c0 609 SUPERFAMILY SSF52540 358 603 1.28E-90 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06810 623f6afd3726008458d624b2d31113c0 609 SUPERFAMILY SSF90123 25 350 2.22E-88 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_06810 623f6afd3726008458d624b2d31113c0 609 Pfam PF00005 ABC transporter 384 532 3.6E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_06810 623f6afd3726008458d624b2d31113c0 609 SMART SM00382 392 584 7.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_06810 623f6afd3726008458d624b2d31113c0 609 Pfam PF00664 ABC transporter transmembrane region 44 321 1.4E-58 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_06810 623f6afd3726008458d624b2d31113c0 609 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_06810 623f6afd3726008458d624b2d31113c0 609 Gene3D G3DSA:1.20.1560.10 14 353 4.0E-106 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_06810 623f6afd3726008458d624b2d31113c0 609 Gene3D G3DSA:3.40.50.300 363 608 5.4E-89 T 12-10-2018 BEN31_10355 377304ab7b3e071974c318e928f61397 340 Gene3D G3DSA:3.40.50.300 17 340 5.1E-102 T 12-10-2018 BEN31_10355 377304ab7b3e071974c318e928f61397 340 ProSitePatterns PS00211 ABC transporters family signature. 171 185 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_10355 377304ab7b3e071974c318e928f61397 340 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 249 337 6.9E-28 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_10355 377304ab7b3e071974c318e928f61397 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 250 317 5.6E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_10355 377304ab7b3e071974c318e928f61397 340 SMART SM00382 55 248 2.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_10355 377304ab7b3e071974c318e928f61397 340 Pfam PF00005 ABC transporter 47 198 1.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_10355 377304ab7b3e071974c318e928f61397 340 SUPERFAMILY SSF52540 19 270 1.3E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_02035 1aa4db60ea78e5384ce449574f332aa7 130 Pfam PF13564 DoxX-like family 10 79 2.7E-6 T 12-10-2018 IPR032808 DoxX family BEN31_03515 32122db37bbbd954435186183e57b11e 254 Gene3D G3DSA:1.10.1060.10 114 248 4.1E-28 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_03515 32122db37bbbd954435186183e57b11e 254 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 234 2.7E-40 T 12-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03515 32122db37bbbd954435186183e57b11e 254 SUPERFAMILY SSF54292 6 112 7.61E-22 T 12-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 BEN31_03515 32122db37bbbd954435186183e57b11e 254 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN31_03515 32122db37bbbd954435186183e57b11e 254 Pfam PF13183 4Fe-4S dicluster domain 151 226 7.7E-9 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN31_03515 32122db37bbbd954435186183e57b11e 254 SUPERFAMILY SSF46548 114 239 6.28E-27 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_03515 32122db37bbbd954435186183e57b11e 254 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 118 1.1E-28 T 12-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03515 32122db37bbbd954435186183e57b11e 254 Gene3D G3DSA:3.10.20.30 1 112 1.0E-30 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BEN31_01310 687a3c882630f4540943541119d8bf1a 795 SUPERFAMILY SSF48179 206 325 3.57E-21 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Gene3D G3DSA:3.40.50.720 1 208 4.3E-64 T 12-10-2018 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 SUPERFAMILY SSF52096 482 792 9.67E-39 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 381 416 5.6E-5 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 208 306 2.6E-11 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Gene3D G3DSA:3.90.226.10 485 689 2.9E-29 T 12-10-2018 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Gene3D G3DSA:1.10.1040.10 365 454 6.1E-8 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 SUPERFAMILY SSF48179 357 446 6.72E-17 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 205 8.7E-43 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Gene3D G3DSA:1.10.1040.10 209 340 6.6E-18 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 Pfam PF00378 Enoyl-CoA hydratase/isomerase 490 624 1.8E-11 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN31_01310 687a3c882630f4540943541119d8bf1a 795 SUPERFAMILY SSF51735 4 206 1.61E-43 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04120 0e1162b1bc0c59b6bc283c380dee172f 360 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 17 357 34.099 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BEN31_04120 0e1162b1bc0c59b6bc283c380dee172f 360 Gene3D G3DSA:1.10.8.1150 48 121 1.8E-24 T 12-10-2018 BEN31_04120 0e1162b1bc0c59b6bc283c380dee172f 360 Gene3D G3DSA:3.30.160.60 327 359 1.9E-5 T 12-10-2018 BEN31_04120 0e1162b1bc0c59b6bc283c380dee172f 360 Pfam PF02618 YceG-like family 54 353 5.2E-83 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BEN31_04120 0e1162b1bc0c59b6bc283c380dee172f 360 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 15 357 3.6E-120 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 SUPERFAMILY SSF47005 135 181 9.29E-13 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 SUPERFAMILY SSF51230 3 92 6.15E-25 T 12-10-2018 IPR011053 Single hybrid motif BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 Pfam PF02817 e3 binding domain 141 175 4.6E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 Gene3D G3DSA:2.40.50.100 2 81 2.1E-25 T 12-10-2018 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 216 444 2.5E-89 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 Gene3D G3DSA:3.30.559.10 197 443 1.9E-90 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 Gene3D G3DSA:4.10.320.10 130 183 3.5E-20 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 SUPERFAMILY SSF52777 207 444 1.16E-88 T 12-10-2018 BEN31_09005 7b3dfc1b809bbcce060244f25a5e1b64 446 Pfam PF00364 Biotin-requiring enzyme 4 75 2.2E-22 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 Gene3D G3DSA:1.10.10.1270 438 491 4.5E-8 T 12-10-2018 BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 Gene3D G3DSA:1.10.10.1270 492 543 1.8E-8 T 12-10-2018 BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 177 187 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 143 153 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 PRINTS PR00723 Subtilisin serine protease family (S8) signature 138 157 4.0E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 PRINTS PR00723 Subtilisin serine protease family (S8) signature 328 344 4.0E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 PRINTS PR00723 Subtilisin serine protease family (S8) signature 173 186 4.0E-17 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 Pfam PF00082 Subtilase family 138 379 8.3E-51 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 SUPERFAMILY SSF52743 119 382 2.62E-85 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 SUPERFAMILY SSF54897 40 98 8.5E-6 T 12-10-2018 BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 Gene3D G3DSA:3.30.70.80 32 104 1.3E-12 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 329 339 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_14345 2925ee5bd26ff12ca8d965d26c229598 543 Gene3D G3DSA:3.40.50.200 117 384 5.0E-85 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Gene3D G3DSA:1.10.10.60 630 688 2.3E-17 T 12-10-2018 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Gene3D G3DSA:3.40.50.720 2 87 1.1E-6 T 12-10-2018 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SUPERFAMILY SSF55785 103 215 3.84E-15 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SUPERFAMILY SSF51735 1 90 2.59E-14 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SMART SM00382 388 531 3.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Pfam PF00158 Sigma-54 interaction domain 368 535 3.2E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 392 405 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Pfam PF00989 PAS fold 237 339 1.7E-13 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Pfam PF00989 PAS fold 120 218 2.5E-12 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SMART SM00091 236 301 2.7E-6 T 12-10-2018 IPR000014 PAS domain BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SMART SM00091 117 183 1.1E-8 T 12-10-2018 IPR000014 PAS domain BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Pfam PF02954 Bacterial regulatory protein, Fis family 642 682 2.7E-15 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 116 227 1.4E-10 T 12-10-2018 IPR000014 PAS domain BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 233 349 2.3E-16 T 12-10-2018 IPR000014 PAS domain BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Gene3D G3DSA:1.10.8.60 540 620 1.6E-19 T 12-10-2018 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SUPERFAMILY SSF52540 367 612 5.1E-68 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SUPERFAMILY SSF46689 631 684 4.48E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Gene3D G3DSA:3.40.50.300 355 539 1.1E-63 T 12-10-2018 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 SUPERFAMILY SSF55785 217 336 2.97E-14 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 648 665 3.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 665 685 3.4E-8 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 582 591 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Gene3D G3DSA:3.30.450.20 107 219 8.6E-19 T 12-10-2018 BEN31_05210 21ff56c67d6b02dceebdc31be1d25bb0 690 Gene3D G3DSA:3.30.450.20 223 339 9.3E-17 T 12-10-2018 BEN31_03235 8135643196e08cfc36c4402ddfa767be 372 Pfam PF01594 AI-2E family transporter 14 356 2.7E-64 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BEN31_03235 8135643196e08cfc36c4402ddfa767be 372 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 359 1.9E-102 T 12-10-2018 IPR014227 Putative transport protein YtvI-like BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 2 267 9.6E-128 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 SUPERFAMILY SSF52172 2 129 2.28E-32 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 156 266 1.0E-58 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 PIRSF PIRSF002937 1 267 3.3E-132 T 12-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 Pfam PF00072 Response regulator receiver domain 6 120 2.8E-28 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 Gene3D G3DSA:3.40.50.2300 1 149 4.0E-32 T 12-10-2018 BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 SUPERFAMILY SSF46894 151 265 6.04E-48 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 157 260 1.1E-44 T 12-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 Gene3D G3DSA:1.10.10.10 150 267 1.0E-54 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05185 9af5ae691a7aae776e5e68a26fe7f0d7 267 SMART SM00448 4 120 1.0E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 Gene3D G3DSA:3.30.479.20 56 147 2.4E-26 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 2.2E-126 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 SUPERFAMILY SSF54713 55 143 1.24E-23 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 Gene3D G3DSA:1.10.286.20 199 236 1.7E-19 T 12-10-2018 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 83.328 T 12-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 SUPERFAMILY SSF46934 3 54 1.36E-20 T 12-10-2018 IPR009060 UBA-like superfamily GO:0005515 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 Pfam PF00889 Elongation factor TS 70 274 1.1E-77 T 12-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 Gene3D G3DSA:1.10.8.10 1 55 1.2E-27 T 12-10-2018 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 SUPERFAMILY SSF54713 152 292 1.19E-52 T 12-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_08050 48d944b7dbfff81f39bac2c0287f1fbc 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 12-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_16565 7df5e6680b4b2f9dc7ca40d76ff472cc 228 Pfam PF03070 TENA/THI-4/PQQC family 10 214 1.0E-47 T 12-10-2018 IPR004305 Thiaminase-2/PQQC BEN31_16565 7df5e6680b4b2f9dc7ca40d76ff472cc 228 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 13 215 2.8E-56 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 BEN31_16565 7df5e6680b4b2f9dc7ca40d76ff472cc 228 SUPERFAMILY SSF48613 3 222 8.31E-67 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BEN31_16565 7df5e6680b4b2f9dc7ca40d76ff472cc 228 Gene3D G3DSA:1.20.910.10 1 224 6.7E-66 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BEN31_13740 29fd9bce28ecf89c2c1e6264a8804972 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.9E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_13740 29fd9bce28ecf89c2c1e6264a8804972 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.9E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_13740 29fd9bce28ecf89c2c1e6264a8804972 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.9E-13 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_13740 29fd9bce28ecf89c2c1e6264a8804972 103 SUPERFAMILY SSF46785 5 91 1.76E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13740 29fd9bce28ecf89c2c1e6264a8804972 103 Gene3D G3DSA:1.10.10.10 2 94 5.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13740 29fd9bce28ecf89c2c1e6264a8804972 103 SMART SM00418 16 93 1.7E-22 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_13740 29fd9bce28ecf89c2c1e6264a8804972 103 Pfam PF12840 Helix-turn-helix domain 17 69 9.2E-12 T 12-10-2018 BEN31_15340 d09cd6f09a85ca15fbfd00f0bf5117ce 291 Gene3D G3DSA:3.90.1280.10 235 291 7.5E-24 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BEN31_15340 d09cd6f09a85ca15fbfd00f0bf5117ce 291 SUPERFAMILY SSF118352 230 288 1.31E-21 T 12-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 BEN31_15340 d09cd6f09a85ca15fbfd00f0bf5117ce 291 PIRSF PIRSF005261 1 289 1.8E-76 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BEN31_15340 d09cd6f09a85ca15fbfd00f0bf5117ce 291 Gene3D G3DSA:3.55.30.10 1 234 1.1E-96 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BEN31_15340 d09cd6f09a85ca15fbfd00f0bf5117ce 291 SUPERFAMILY SSF64397 1 239 9.29E-77 T 12-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 BEN31_15340 d09cd6f09a85ca15fbfd00f0bf5117ce 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 289 41.366 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BEN31_15340 d09cd6f09a85ca15fbfd00f0bf5117ce 291 Pfam PF01430 Hsp33 protein 2 278 1.8E-89 T 12-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 Pfam PF12836 Helix-hairpin-helix motif 144 207 3.7E-23 T 12-10-2018 BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 SUPERFAMILY SSF47781 123 208 5.23E-29 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 Gene3D G3DSA:1.10.150.310 154 209 6.0E-14 T 12-10-2018 BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 143 208 3.5E-25 T 12-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 SMART SM00278 186 205 0.18 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 SMART SM00278 156 175 0.45 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 Pfam PF10531 SLBB domain 68 119 6.8E-12 T 12-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_04500 1a949978b339ab64eec6c709f1afe05f 209 Gene3D G3DSA:3.10.560.10 53 153 1.3E-10 T 12-10-2018 BEN31_13360 a1f1de9fd802886d8026104eb19d06ed 335 Gene3D G3DSA:2.50.20.10 29 210 1.0E-14 T 12-10-2018 BEN31_13360 a1f1de9fd802886d8026104eb19d06ed 335 SUPERFAMILY SSF89392 28 203 8.63E-25 T 12-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX BEN31_13360 a1f1de9fd802886d8026104eb19d06ed 335 Pfam PF14285 Domain of unknown function (DUF4367) 230 329 3.7E-6 T 12-10-2018 IPR025377 Domain of unknown function DUF4367 BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 2 1161 0.0 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1162 65.112 T 12-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 SUPERFAMILY SSF52540 294 749 4.16E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 Gene3D G3DSA:3.40.50.300 563 700 4.6E-44 T 12-10-2018 BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 Gene3D G3DSA:3.40.50.300 280 421 3.3E-30 T 12-10-2018 BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 Gene3D G3DSA:3.40.50.300 118 278 3.6E-34 T 12-10-2018 BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 Pfam PF12705 PD-(D/E)XK nuclease superfamily 791 1131 4.9E-60 T 12-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BEN31_10695 6cf745ba304253fd04fc76d2893a71dd 1169 SUPERFAMILY SSF52540 5 231 1.07E-5 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 Pfam PF02589 LUD domain 72 294 4.4E-54 T 12-10-2018 IPR003741 LUD domain BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 Pfam PF13183 4Fe-4S dicluster domain 310 376 4.6E-8 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 SUPERFAMILY SSF46548 286 392 1.99E-15 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 454 2.5E-201 T 12-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 312 323 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 Gene3D G3DSA:3.40.50.10420 130 277 9.2E-15 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 SUPERFAMILY SSF100950 64 295 7.95E-37 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_07510 4ecd83e9fa189d5754dbaf76bbc74144 473 Pfam PF11870 Domain of unknown function (DUF3390) 384 470 1.4E-23 T 12-10-2018 IPR024569 4Fe-4S binding protein, C-terminal BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 5.3E-144 T 12-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 Gene3D G3DSA:3.40.50.300 13 177 1.8E-105 T 12-10-2018 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 Gene3D G3DSA:1.10.8.60 8 235 1.8E-105 T 12-10-2018 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.0E-45 T 12-10-2018 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 SUPERFAMILY SSF48019 244 359 5.36E-25 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 3.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 3.5E-5 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 Gene3D G3DSA:1.20.272.10 248 362 1.3E-8 T 12-10-2018 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 SMART SM00382 37 179 1.2E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 240 360 4.1E-12 T 12-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 BEN31_15635 9b8561cb156e9357bf42c92338a10543 570 SUPERFAMILY SSF52540 31 222 4.74E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07340 33eecf9d32b0610e0df3d92b1536f1e9 193 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 182 2.6E-50 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BEN31_07340 33eecf9d32b0610e0df3d92b1536f1e9 193 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 192 7.3E-68 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BEN31_07340 33eecf9d32b0610e0df3d92b1536f1e9 193 SMART SM01207 8 183 2.5E-77 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BEN31_07340 33eecf9d32b0610e0df3d92b1536f1e9 193 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 19.964 T 12-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 SUPERFAMILY SSF52540 332 577 2.9E-97 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 SUPERFAMILY SSF90123 5 327 2.09E-80 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 Pfam PF00664 ABC transporter transmembrane region 23 289 3.3E-49 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 Gene3D G3DSA:1.20.1560.10 3 323 4.3E-108 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 Pfam PF00005 ABC transporter 358 507 5.1E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 Gene3D G3DSA:3.40.50.300 331 580 4.1E-94 T 12-10-2018 BEN31_11625 8b77a8a3dea7b8a6ea2cd2514bb9b6d1 580 SMART SM00382 367 553 4.6E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 Gene3D G3DSA:3.90.1820.20 1 432 1.6E-144 T 12-10-2018 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 9.4E-70 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 SUPERFAMILY SSF56327 168 433 7.91E-73 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 SUPERFAMILY SSF51735 2 167 3.51E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 405 3.7E-65 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 1.3E-38 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 1.3E-38 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.3E-38 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 1.3E-38 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 1.3E-38 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 1.3E-38 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_07155 a3687b9851851bb00cae8310d5f344fa 443 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 1.3E-38 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12430 2ff79360e7f6498b5b1ee6cb57f90818 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 2.2E-24 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 BEN31_12430 2ff79360e7f6498b5b1ee6cb57f90818 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 3.0E-37 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 BEN31_12430 2ff79360e7f6498b5b1ee6cb57f90818 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 26.632 T 12-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 BEN31_12430 2ff79360e7f6498b5b1ee6cb57f90818 96 Gene3D G3DSA:1.10.20.60 1 94 6.0E-35 T 12-10-2018 BEN31_12430 2ff79360e7f6498b5b1ee6cb57f90818 96 SUPERFAMILY SSF141000 3 94 4.84E-34 T 12-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 134 146 1.6E-20 T 12-10-2018 BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 52 68 1.6E-20 T 12-10-2018 BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 170 194 1.6E-20 T 12-10-2018 BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 78 92 1.6E-20 T 12-10-2018 BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 Pfam PF02384 N-6 DNA Methylase 48 244 1.6E-18 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 Gene3D G3DSA:3.40.50.150 55 258 7.7E-41 T 12-10-2018 BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 SUPERFAMILY SSF53335 50 274 3.29E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_00170 e38290831c4cb7fe17a865d509b879d5 407 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 137 143 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 279 294 2.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 235 252 2.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 309 330 2.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 17 39 2.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 215 233 2.0E-43 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 SUPERFAMILY SSF160544 251 358 6.02E-43 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 14 355 2.1E-98 T 12-10-2018 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 Gene3D G3DSA:3.40.1690.10 225 362 9.2E-59 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 Pfam PF01312 FlhB HrpN YscU SpaS Family 14 354 2.3E-133 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN31_08110 183b3ff4c2f1dafdcd14f34f5a196faa 362 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 15 360 7.8E-136 T 12-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 Pfam PF00206 Lyase 14 343 2.3E-115 T 12-10-2018 IPR022761 Fumarate lyase, N-terminal BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 7 470 1.3E-243 T 12-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 SUPERFAMILY SSF48557 6 461 2.83E-149 T 12-10-2018 IPR008948 L-Aspartase-like GO:0003824 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 4.5E-8 T 12-10-2018 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 PRINTS PR00145 Argininosuccinate lyase family signature 135 157 4.5E-8 T 12-10-2018 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 4.5E-8 T 12-10-2018 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 12-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 2.0E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 2.0E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 2.0E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 2.0E-32 T 12-10-2018 IPR000362 Fumarate lyase family BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 Pfam PF10415 Fumarase C C-terminus 410 462 1.6E-18 T 12-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 Gene3D G3DSA:1.10.275.10 7 140 4.6E-57 T 12-10-2018 IPR024083 Fumarase/histidase, N-terminal BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 Gene3D G3DSA:1.20.200.10 141 408 1.1E-114 T 12-10-2018 BEN31_16665 e1e260fbaf008ce1e896b3340402a933 474 Gene3D G3DSA:1.10.40.30 409 460 2.0E-20 T 12-10-2018 BEN31_15390 b3c2c863da68632402c114ad83fbbcb0 132 Pfam PF00575 S1 RNA binding domain 4 74 1.5E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_15390 b3c2c863da68632402c114ad83fbbcb0 132 SMART SM00316 4 74 9.9E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_15390 b3c2c863da68632402c114ad83fbbcb0 132 SUPERFAMILY SSF50249 4 83 9.61E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_15390 b3c2c863da68632402c114ad83fbbcb0 132 Gene3D G3DSA:2.40.50.140 1 85 2.8E-29 T 12-10-2018 BEN31_14835 fb499569d4a3bc355983e4b64754164a 237 Gene3D G3DSA:3.40.630.40 39 234 1.0E-55 T 12-10-2018 BEN31_14835 fb499569d4a3bc355983e4b64754164a 237 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 43 226 5.4E-49 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_14835 fb499569d4a3bc355983e4b64754164a 237 SMART SM00646 115 226 4.3E-37 T 12-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 BEN31_14835 fb499569d4a3bc355983e4b64754164a 237 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 41 228 6.2E-84 T 12-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 BEN31_14835 fb499569d4a3bc355983e4b64754164a 237 SUPERFAMILY SSF53187 41 230 3.77E-53 T 12-10-2018 BEN31_06050 14f45f1931c0a92b7dc3172a407d50e2 381 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 4 374 2.2E-176 T 12-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 BEN31_06050 14f45f1931c0a92b7dc3172a407d50e2 381 SUPERFAMILY SSF53756 8 376 2.43E-90 T 12-10-2018 BEN31_06050 14f45f1931c0a92b7dc3172a407d50e2 381 Gene3D G3DSA:3.40.50.2000 176 357 1.3E-128 T 12-10-2018 BEN31_06050 14f45f1931c0a92b7dc3172a407d50e2 381 Pfam PF00534 Glycosyl transferases group 1 195 350 7.3E-42 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BEN31_06050 14f45f1931c0a92b7dc3172a407d50e2 381 Gene3D G3DSA:3.40.50.2000 14 368 1.3E-128 T 12-10-2018 BEN31_06050 14f45f1931c0a92b7dc3172a407d50e2 381 Pfam PF13439 Glycosyltransferase Family 4 14 178 1.2E-28 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN31_00795 dc353f867027762cf5a3cfeaf566ea6e 149 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 8 144 3.5E-44 T 12-10-2018 IPR006524 Transcription activator, ArpU family BEN31_00795 dc353f867027762cf5a3cfeaf566ea6e 149 Gene3D G3DSA:1.20.140.160 8 141 1.1E-6 T 12-10-2018 BEN31_00795 dc353f867027762cf5a3cfeaf566ea6e 149 Pfam PF07374 Protein of unknown function (DUF1492) 82 134 7.3E-5 T 12-10-2018 IPR010861 Protein of unknown function DUF1492 BEN31_00795 dc353f867027762cf5a3cfeaf566ea6e 149 SUPERFAMILY SSF88659 69 142 9.42E-8 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 Gene3D G3DSA:3.40.50.300 259 473 6.7E-51 T 12-10-2018 BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 Pfam PF00005 ABC transporter 285 409 2.9E-17 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 SMART SM00382 293 454 3.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 SMART SM00382 27 150 2.8E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 Pfam PF00005 ABC transporter 23 59 2.3E-8 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 SUPERFAMILY SSF52540 253 469 2.5E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 SUPERFAMILY SSF52540 4 187 2.86E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 Pfam PF12848 ABC transporter 145 249 1.5E-8 T 12-10-2018 IPR032781 ABC-transporter extension domain BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 Gene3D G3DSA:3.40.50.300 2 65 7.3E-11 T 12-10-2018 BEN31_00415 2efc55d999c4bbecfb6fb4a48cddfbbf 519 Gene3D G3DSA:3.40.50.300 66 204 8.6E-28 T 12-10-2018 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 Gene3D G3DSA:1.10.1650.20 286 338 6.0E-186 T 12-10-2018 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 8 700 0.0 T 12-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 95 688 5.3E-176 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 SUPERFAMILY SSF48168 8 166 2.88E-49 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 91 163 1.0E-16 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 Pfam PF08343 Ribonucleotide reductase N-terminal 9 89 7.9E-30 T 12-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 Gene3D G3DSA:3.20.70.20 152 686 6.0E-186 T 12-10-2018 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 Pfam PF02867 Ribonucleotide reductase, barrel domain 168 684 5.1E-137 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 1.5E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 1.5E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 243 262 1.5E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 1.5E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 1.5E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_07645 fd7e5b33dbc707a2dfbdcb0f19d7469e 700 SUPERFAMILY SSF51998 167 689 9.16E-167 T 12-10-2018 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 Gene3D G3DSA:3.10.290.10 1 63 4.5E-22 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 SMART SM00363 2 63 6.3E-16 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 Pfam PF00849 RNA pseudouridylate synthase 62 196 1.8E-24 T 12-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 SUPERFAMILY SSF55120 46 237 7.44E-44 T 12-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 Pfam PF01479 S4 domain 2 48 6.3E-15 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 2.5E-50 T 12-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 SUPERFAMILY SSF55174 2 67 1.06E-16 T 12-10-2018 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 Gene3D G3DSA:3.30.70.1560 123 215 2.7E-55 T 12-10-2018 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 12-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 BEN31_05695 cb6238e5fc6a3e0cc0b470ec54a25577 244 Gene3D G3DSA:3.30.70.580 64 222 2.7E-55 T 12-10-2018 BEN31_11705 e3fe8b50ed75f42f9a419a63d334cd2f 200 PRINTS PR00046 Major sigma-70 factor signature 166 177 4.6E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_11705 e3fe8b50ed75f42f9a419a63d334cd2f 200 PRINTS PR00046 Major sigma-70 factor signature 151 166 4.6E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_11705 e3fe8b50ed75f42f9a419a63d334cd2f 200 PRINTS PR00046 Major sigma-70 factor signature 134 146 4.6E-5 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_11705 e3fe8b50ed75f42f9a419a63d334cd2f 200 SUPERFAMILY SSF88659 118 179 1.01E-16 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_11705 e3fe8b50ed75f42f9a419a63d334cd2f 200 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 47 180 6.1E-13 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_11705 e3fe8b50ed75f42f9a419a63d334cd2f 200 Pfam PF04545 Sigma-70, region 4 132 179 2.0E-14 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_11705 e3fe8b50ed75f42f9a419a63d334cd2f 200 Gene3D G3DSA:1.20.140.160 26 182 1.4E-14 T 12-10-2018 BEN31_07100 349eea0f08514bf18ba29fc04954ea51 534 Pfam PF04740 LXG domain of WXG superfamily 2 174 1.6E-38 T 12-10-2018 IPR006829 LXG domain BEN31_07100 349eea0f08514bf18ba29fc04954ea51 534 Pfam PF14449 Pre-toxin TG 229 294 2.0E-19 T 12-10-2018 IPR027797 Pre-toxin TG domain BEN31_07100 349eea0f08514bf18ba29fc04954ea51 534 Pfam PF14436 Bacterial EndoU nuclease 399 523 4.5E-15 T 12-10-2018 IPR029501 Bacterial EndoU nuclease BEN31_15935 18df7d95fdde68376179c4142a009893 149 Gene3D G3DSA:3.10.430.100 60 149 3.4E-33 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BEN31_15935 18df7d95fdde68376179c4142a009893 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 1.0E-30 T 12-10-2018 IPR020069 Ribosomal protein L9, C-terminal BEN31_15935 18df7d95fdde68376179c4142a009893 149 Gene3D G3DSA:3.40.5.10 1 52 2.1E-25 T 12-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15935 18df7d95fdde68376179c4142a009893 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15935 18df7d95fdde68376179c4142a009893 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.5E-52 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15935 18df7d95fdde68376179c4142a009893 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.863 T 12-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15935 18df7d95fdde68376179c4142a009893 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 6.4E-23 T 12-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15935 18df7d95fdde68376179c4142a009893 149 SUPERFAMILY SSF55658 1 56 3.14E-17 T 12-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal BEN31_15935 18df7d95fdde68376179c4142a009893 149 SUPERFAMILY SSF55653 57 147 3.66E-29 T 12-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily BEN31_12740 cbeded79e612de53aec9e1800d99357b 272 Gene3D G3DSA:2.60.120.10 65 191 2.3E-41 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_12740 cbeded79e612de53aec9e1800d99357b 272 Pfam PF07883 Cupin domain 90 165 1.7E-12 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BEN31_12740 cbeded79e612de53aec9e1800d99357b 272 SUPERFAMILY SSF51182 51 172 7.49E-25 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 Gene3D G3DSA:1.25.40.10 310 422 5.5E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 Pfam PF13432 Tetratricopeptide repeat 177 237 2.4E-4 T 12-10-2018 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SUPERFAMILY SSF48452 173 408 2.74E-27 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 Gene3D G3DSA:1.25.40.10 32 104 1.3E-9 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 Gene3D G3DSA:1.25.40.10 203 309 2.3E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SMART SM00028 204 237 230.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SMART SM00028 238 271 17.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SMART SM00028 272 305 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SMART SM00028 374 407 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SMART SM00028 101 134 84.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SMART SM00028 135 168 66.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SMART SM00028 171 203 16.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 Pfam PF14559 Tetratricopeptide repeat 47 110 1.8E-5 T 12-10-2018 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 Pfam PF14559 Tetratricopeptide repeat 250 314 3.0E-6 T 12-10-2018 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 SUPERFAMILY SSF48452 38 200 3.98E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05985 b79f60509f073c807e2e8e5eb7675340 423 Gene3D G3DSA:1.25.40.10 105 202 1.9E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_08410 f549b6d114fca773a09ac8c217100393 298 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 43 289 1.0E-90 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BEN31_08410 f549b6d114fca773a09ac8c217100393 298 Gene3D G3DSA:2.40.50.140 1 65 2.2E-30 T 12-10-2018 BEN31_08410 f549b6d114fca773a09ac8c217100393 298 Gene3D G3DSA:3.40.50.300 66 230 2.8E-49 T 12-10-2018 BEN31_08410 f549b6d114fca773a09ac8c217100393 298 SUPERFAMILY SSF50249 1 66 1.1E-17 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_08410 f549b6d114fca773a09ac8c217100393 298 Pfam PF16745 RsgA N-terminal domain 3 60 6.4E-25 T 12-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal BEN31_08410 f549b6d114fca773a09ac8c217100393 298 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 295 38.485 T 12-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 BEN31_08410 f549b6d114fca773a09ac8c217100393 298 Gene3D G3DSA:1.10.40.50 231 298 9.5E-23 T 12-10-2018 BEN31_08410 f549b6d114fca773a09ac8c217100393 298 Pfam PF03193 RsgA GTPase 63 230 7.6E-62 T 12-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 BEN31_08410 f549b6d114fca773a09ac8c217100393 298 SUPERFAMILY SSF52540 68 295 1.3E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 965 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Gene3D G3DSA:3.30.1490.20 683 750 1.5E-81 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 542 3.6E-38 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Gene3D G3DSA:3.30.470.20 664 922 1.5E-81 T 12-10-2018 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 SUPERFAMILY SSF56059 128 399 5.3E-107 T 12-10-2018 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 670 869 1.4E-33 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 7.0E-80 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 SUPERFAMILY SSF56059 670 925 6.19E-77 T 12-10-2018 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Gene3D G3DSA:3.40.50.20 550 659 7.3E-44 T 12-10-2018 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 SUPERFAMILY SSF52440 1 127 1.58E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1016 12.248 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 832 839 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.8E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.8E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.8E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.8E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 2.8E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.8E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 2.8E-61 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Gene3D G3DSA:3.40.50.20 1 116 2.2E-47 T 12-10-2018 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Gene3D G3DSA:1.10.1030.10 403 547 4.1E-40 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 SMART SM01096 420 542 2.9E-55 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 SUPERFAMILY SSF48108 394 546 1.06E-42 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 Gene3D G3DSA:3.30.470.20 119 401 3.1E-122 T 12-10-2018 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 706 720 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 SUPERFAMILY SSF52440 555 672 3.31E-45 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_10425 4c8486e86f8fced5603262fd735dbf79 1026 SMART SM01209 676 839 0.0089 T 12-10-2018 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 Pfam PF00331 Glycosyl hydrolase family 10 63 328 2.8E-46 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 Gene3D G3DSA:3.20.20.80 55 347 6.5E-75 T 12-10-2018 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 SMART SM00633 99 340 2.3E-10 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 PRINTS PR00134 Glycosyl hydrolase family 10 signature 130 142 4.1E-8 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 PRINTS PR00134 Glycosyl hydrolase family 10 signature 212 223 4.1E-8 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 PRINTS PR00134 Glycosyl hydrolase family 10 signature 174 185 4.1E-8 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 PRINTS PR00134 Glycosyl hydrolase family 10 signature 240 252 4.1E-8 T 12-10-2018 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 BEN31_07995 c83cef69e642c061c19ed8791a0d263b 409 SUPERFAMILY SSF51445 50 354 2.62E-91 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_17595 fd931f86cbded0446c1c657dcf70002c 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 1.9E-92 T 12-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BEN31_17595 fd931f86cbded0446c1c657dcf70002c 209 SUPERFAMILY SSF53271 4 207 3.41E-73 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_17595 fd931f86cbded0446c1c657dcf70002c 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 5.2E-75 T 12-10-2018 BEN31_17595 fd931f86cbded0446c1c657dcf70002c 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.097 T 12-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BEN31_17595 fd931f86cbded0446c1c657dcf70002c 209 Gene3D G3DSA:3.40.50.2020 1 209 3.5E-83 T 12-10-2018 BEN31_04760 2de6679401614efd478a987ffd6bb713 142 SUPERFAMILY SSF46785 5 133 8.16E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_04760 2de6679401614efd478a987ffd6bb713 142 Pfam PF01475 Ferric uptake regulator family 12 129 1.1E-28 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BEN31_04760 2de6679401614efd478a987ffd6bb713 142 Gene3D G3DSA:1.10.10.10 1 83 9.1E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04760 2de6679401614efd478a987ffd6bb713 142 Gene3D G3DSA:3.30.1490.190 87 141 3.6E-14 T 12-10-2018 BEN31_06910 30138c0324420b8e300a9bf84de95be2 273 Gene3D G3DSA:3.40.50.10090 14 258 4.8E-75 T 12-10-2018 BEN31_06910 30138c0324420b8e300a9bf84de95be2 273 Gene3D G3DSA:3.40.50.10090 38 174 4.8E-75 T 12-10-2018 BEN31_06910 30138c0324420b8e300a9bf84de95be2 273 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 259 1.1E-33 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_06910 30138c0324420b8e300a9bf84de95be2 273 SUPERFAMILY SSF69618 7 268 3.53E-52 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_11315 0829940badfab29314070a7489eebf88 168 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 7 165 3.2E-49 T 12-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 BEN31_11315 0829940badfab29314070a7489eebf88 168 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 26 164 1.3E-27 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BEN31_17945 7166bee14296ae2c1bafc7e9d8962fe1 493 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 24 471 1.3E-167 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_17945 7166bee14296ae2c1bafc7e9d8962fe1 493 PIRSF PIRSF005690 9 485 8.5E-165 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_06010 a6405a32b095df98e16e25761fcd5063 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 158 2.0E-8 T 12-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BEN31_06010 a6405a32b095df98e16e25761fcd5063 255 SUPERFAMILY SSF81648 21 156 1.14E-28 T 12-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 BEN31_06010 a6405a32b095df98e16e25761fcd5063 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 184 249 1.0E-13 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_06010 a6405a32b095df98e16e25761fcd5063 255 Gene3D G3DSA:1.20.810.10 13 168 7.2E-24 T 12-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 BEN31_06010 a6405a32b095df98e16e25761fcd5063 255 PIRSF PIRSF036636 1 255 6.4E-148 T 12-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 BEN31_06010 a6405a32b095df98e16e25761fcd5063 255 Gene3D G3DSA:1.10.760.10 181 253 7.3E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN31_06010 a6405a32b095df98e16e25761fcd5063 255 SUPERFAMILY SSF46626 136 251 3.93E-13 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN31_10235 8ebe17f15bd41e1dc25fea81799f0a91 209 Pfam PF04607 Region found in RelA / SpoT proteins 45 163 6.6E-38 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN31_10235 8ebe17f15bd41e1dc25fea81799f0a91 209 SMART SM00954 45 165 1.4E-42 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN31_10235 8ebe17f15bd41e1dc25fea81799f0a91 209 Gene3D G3DSA:1.10.287.860 148 209 2.4E-28 T 12-10-2018 BEN31_10235 8ebe17f15bd41e1dc25fea81799f0a91 209 SUPERFAMILY SSF81301 5 200 2.78E-59 T 12-10-2018 BEN31_10235 8ebe17f15bd41e1dc25fea81799f0a91 209 Gene3D G3DSA:3.30.460.10 1 147 1.2E-56 T 12-10-2018 BEN31_09910 2e5f6100a4a3db4f00868ea0371747db 56 Gene3D G3DSA:1.20.5.740 34 56 4.0E-12 T 12-10-2018 BEN31_09910 2e5f6100a4a3db4f00868ea0371747db 56 Pfam PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system 1 56 3.0E-35 T 12-10-2018 IPR025897 Antitoxin SpoIISB BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 130 4.9E-16 T 12-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 Gene3D G3DSA:2.60.15.10 1 88 2.8E-32 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 82 1.5E-29 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 129 1.3E-40 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 SUPERFAMILY SSF46604 87 129 5.75E-6 T 12-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 SUPERFAMILY SSF51344 3 83 2.35E-24 T 12-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 2.0E-31 T 12-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 128 23.805 T 12-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17640 78f98231f91295b8fc7c5cf8b1e4b765 131 Gene3D G3DSA:1.20.5.440 89 130 8.9E-16 T 12-10-2018 BEN31_04645 52aa2ad3751fa73683fb207b83fc4235 128 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 122 1.1E-36 T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN31_04645 52aa2ad3751fa73683fb207b83fc4235 128 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 75 86 - T 12-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN31_04645 52aa2ad3751fa73683fb207b83fc4235 128 Gene3D G3DSA:1.10.3830.10 8 126 2.1E-41 T 12-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 BEN31_05820 0279245a6a80055e8326d9fe6dde6483 60 ProDom PD052359 YPFB 1 57 1.0E-6 T 12-10-2018 IPR035281 Protein of unknown function DUF5359 BEN31_05820 0279245a6a80055e8326d9fe6dde6483 60 Pfam PF17313 Family of unknown function (DUF5359) 1 56 2.0E-19 T 12-10-2018 IPR035281 Protein of unknown function DUF5359 BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 Gene3D G3DSA:3.60.15.10 10 436 3.1E-162 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 Gene3D G3DSA:3.10.20.580 449 555 1.2E-37 T 12-10-2018 BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 43.994 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 PIRSF PIRSF004803 1 555 8.7E-222 T 12-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 Pfam PF00753 Metallo-beta-lactamase superfamily 20 167 1.1E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 SUPERFAMILY SSF56281 10 424 7.08E-77 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 Gene3D G3DSA:3.40.50.10710 208 365 3.1E-162 T 12-10-2018 BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 553 8.2E-213 T 12-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 407 5.9E-9 T 12-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain BEN31_07885 3915bf4f75e6d76e51430607a2a76c01 555 SMART SM00849 21 220 2.2E-13 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_13115 b72efe00119169fd508bfc0636b56ecd 299 Pfam PF00561 alpha/beta hydrolase fold 24 273 7.3E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_13115 b72efe00119169fd508bfc0636b56ecd 299 Gene3D G3DSA:3.40.50.1820 1 283 1.2E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13115 b72efe00119169fd508bfc0636b56ecd 299 SUPERFAMILY SSF53474 2 281 4.63E-41 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13115 b72efe00119169fd508bfc0636b56ecd 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 4.3E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_13115 b72efe00119169fd508bfc0636b56ecd 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 4.3E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_13115 b72efe00119169fd508bfc0636b56ecd 299 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 4.3E-5 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 SUPERFAMILY SSF50447 176 298 4.2E-34 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Pfam PF06421 GTP-binding protein LepA C-terminus 498 604 7.6E-52 T 12-10-2018 IPR013842 GTP-binding protein LepA, C-terminal BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Gene3D G3DSA:3.30.70.2570 490 564 6.0E-35 T 12-10-2018 IPR038363 LepA, C-terminal domain superfamily BEN31_04545 a078e520c61862201c49da364ceafbb9 612 SUPERFAMILY SSF54980 302 380 1.01E-18 T 12-10-2018 IPR035647 EF-G domain III/V-like BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Gene3D G3DSA:3.30.70.3380 378 489 6.2E-44 T 12-10-2018 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Pfam PF00679 Elongation factor G C-terminus 409 496 2.1E-25 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 314.602 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 TIGRFAM TIGR01393 lepA: elongation factor 4 13 606 0.0 T 12-10-2018 IPR006297 Elongation factor 4 GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Gene3D G3DSA:3.40.50.300 10 195 7.1E-74 T 12-10-2018 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 SUPERFAMILY SSF52540 10 215 3.78E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Gene3D G3DSA:3.30.70.870 296 377 2.3E-36 T 12-10-2018 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 SUPERFAMILY SSF54980 409 504 4.8E-27 T 12-10-2018 IPR035647 EF-G domain III/V-like BEN31_04545 a078e520c61862201c49da364ceafbb9 612 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 PRINTS PR00315 GTP-binding elongation factor signature 100 111 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 PRINTS PR00315 GTP-binding elongation factor signature 16 29 3.8E-14 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Pfam PF03144 Elongation factor Tu domain 2 215 285 4.3E-12 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Pfam PF00009 Elongation factor Tu GTP binding domain 13 191 1.4E-53 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BEN31_04545 a078e520c61862201c49da364ceafbb9 612 Gene3D G3DSA:2.40.30.10 196 295 4.1E-38 T 12-10-2018 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 184 1.4E-19 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_04545 a078e520c61862201c49da364ceafbb9 612 SMART SM00838 408 496 2.2E-4 T 12-10-2018 IPR000640 Elongation factor EFG, domain V-like BEN31_13830 5c909899eabbc87c01d5ffc63d45f1ce 247 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_13830 5c909899eabbc87c01d5ffc63d45f1ce 247 SMART SM00382 26 223 1.8E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13830 5c909899eabbc87c01d5ffc63d45f1ce 247 Gene3D G3DSA:3.40.50.300 1 245 2.8E-77 T 12-10-2018 BEN31_13830 5c909899eabbc87c01d5ffc63d45f1ce 247 Pfam PF00005 ABC transporter 17 169 1.2E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_13830 5c909899eabbc87c01d5ffc63d45f1ce 247 PIRSF PIRSF039085 1 245 8.1E-112 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BEN31_13830 5c909899eabbc87c01d5ffc63d45f1ce 247 SUPERFAMILY SSF52540 1 239 5.62E-78 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 264 1.2E-28 T 12-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 172 6.2E-47 T 12-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 SMART SM00279 176 211 4.4E-16 T 12-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 SMART SM00475 3 264 2.6E-117 T 12-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 SUPERFAMILY SSF88723 3 156 1.24E-44 T 12-10-2018 IPR029060 PIN-like domain superfamily BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 Gene3D G3DSA:3.40.50.1010 5 275 1.4E-81 T 12-10-2018 BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 Gene3D G3DSA:1.10.150.20 177 249 1.4E-81 T 12-10-2018 BEN31_06240 1aec3af18855892609bb4321c5adeb94 295 SUPERFAMILY SSF47807 174 283 7.63E-28 T 12-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily BEN31_01985 fdabc6520ed0c9813663d416532bb55c 343 Pfam PF03060 Nitronate monooxygenase 5 341 4.2E-99 T 12-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 BEN31_01985 fdabc6520ed0c9813663d416532bb55c 343 SUPERFAMILY SSF51412 4 340 2.29E-60 T 12-10-2018 BEN31_01985 fdabc6520ed0c9813663d416532bb55c 343 Gene3D G3DSA:3.20.20.70 2 343 1.8E-110 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 658 0.0 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 SUPERFAMILY SSF46600 615 659 1.05E-10 T 12-10-2018 IPR036876 UVR domain superfamily BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Gene3D G3DSA:3.40.50.300 1 242 2.9E-84 T 12-10-2018 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 660 45.031 T 12-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Pfam PF04851 Type III restriction enzyme, res subunit 13 130 6.8E-12 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Gene3D G3DSA:3.40.50.300 248 413 2.6E-54 T 12-10-2018 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Pfam PF02151 UvrB/uvrC motif 625 659 1.7E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Pfam PF00271 Helicase conserved C-terminal domain 440 544 3.8E-19 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 SUPERFAMILY SSF52540 324 574 3.39E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Gene3D G3DSA:3.40.50.300 414 595 1.8E-53 T 12-10-2018 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 SMART SM00487 9 424 2.5E-24 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Gene3D G3DSA:4.10.860.10 600 660 2.0E-6 T 12-10-2018 BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 Pfam PF12344 Ultra-violet resistance protein B 551 593 1.0E-20 T 12-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 SMART SM00490 459 545 2.7E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_18470 0ada096c3a40d5762d12ddde031717c7 661 SUPERFAMILY SSF52540 3 414 4.51E-144 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.1E-5 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.1E-5 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 273 1.1E-5 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 SUPERFAMILY SSF51905 1 307 2.56E-22 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.0E-5 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 3.0E-5 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 3.0E-5 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 3.0E-5 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 Gene3D G3DSA:3.50.50.100 1 354 8.4E-76 T 12-10-2018 BEN31_01575 25b51367c81d7b05f127b7379469d01a 355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 1.5E-35 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_16590 8ad8bb63e961cbd1d428c0b456101cd3 271 Gene3D G3DSA:2.30.320.10 2 271 2.7E-97 T 12-10-2018 IPR035948 YwqG-like superfamily BEN31_16590 8ad8bb63e961cbd1d428c0b456101cd3 271 SUPERFAMILY SSF103032 6 271 8.76E-80 T 12-10-2018 IPR035948 YwqG-like superfamily BEN31_16590 8ad8bb63e961cbd1d428c0b456101cd3 271 Pfam PF09234 Domain of unknown function (DUF1963) 40 270 1.7E-64 T 12-10-2018 IPR015315 Protein of unknown function DUF1963 BEN31_06120 035fa7a5418aee7f41cb2b318553971e 203 SUPERFAMILY SSF52980 34 196 2.47E-66 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN31_06120 035fa7a5418aee7f41cb2b318553971e 203 Pfam PF03838 Recombination protein U 31 193 2.1E-64 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 BEN31_06120 035fa7a5418aee7f41cb2b318553971e 203 TIGRFAM TIGR00648 recU: recombination protein U 30 196 2.6E-80 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 BEN31_06120 035fa7a5418aee7f41cb2b318553971e 203 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 203 98.736 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 BEN31_06120 035fa7a5418aee7f41cb2b318553971e 203 Gene3D G3DSA:3.40.1350.10 34 203 5.8E-71 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BEN31_06120 035fa7a5418aee7f41cb2b318553971e 203 PIRSF PIRSF037785 24 203 2.0E-74 T 12-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 BEN31_03295 8002c662078f3baf283dfb5f82f12058 126 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 31.087 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BEN31_03295 8002c662078f3baf283dfb5f82f12058 126 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 1.9E-34 T 12-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BEN31_03295 8002c662078f3baf283dfb5f82f12058 126 Gene3D G3DSA:3.30.160.750 63 125 4.4E-17 T 12-10-2018 BEN31_03295 8002c662078f3baf283dfb5f82f12058 126 Gene3D G3DSA:3.30.360.110 1 62 2.3E-25 T 12-10-2018 BEN31_03295 8002c662078f3baf283dfb5f82f12058 126 SUPERFAMILY SSF56276 3 113 4.32E-39 T 12-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 BEN31_03295 8002c662078f3baf283dfb5f82f12058 126 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 2.2E-39 T 12-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 Gene3D G3DSA:3.40.50.1980 393 540 4.7E-22 T 12-10-2018 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 SUPERFAMILY SSF46689 229 279 3.09E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 SMART SM00342 192 275 5.2E-28 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 Pfam PF01497 Periplasmic binding protein 305 518 5.8E-19 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 3.5E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 3.5E-6 T 12-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 SUPERFAMILY SSF46689 178 226 4.66E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 SUPERFAMILY SSF51215 40 163 1.14E-5 T 12-10-2018 IPR037923 Transcription regulator HTH-like BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 Gene3D G3DSA:1.10.10.2730 230 275 4.1E-17 T 12-10-2018 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 Gene3D G3DSA:1.10.10.60 178 229 2.4E-12 T 12-10-2018 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 Gene3D G3DSA:3.40.50.1980 276 390 6.4E-9 T 12-10-2018 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 Pfam PF12833 Helix-turn-helix domain 199 276 2.8E-20 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_15960 8c4efc39a865fade157a79e79e0663c5 541 SUPERFAMILY SSF53807 275 536 3.57E-34 T 12-10-2018 BEN31_17185 6a6b7db0490d1b8eed18514ed8498935 256 SUPERFAMILY SSF53448 3 225 1.69E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17185 6a6b7db0490d1b8eed18514ed8498935 256 Pfam PF00535 Glycosyl transferase family 2 5 167 2.5E-23 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_17185 6a6b7db0490d1b8eed18514ed8498935 256 Gene3D G3DSA:3.90.550.10 3 255 7.5E-82 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_16900 084e58f30eee533aed4e096e04d44f82 363 Gene3D G3DSA:3.30.470.10 25 352 1.7E-137 T 12-10-2018 BEN31_16900 084e58f30eee533aed4e096e04d44f82 363 Gene3D G3DSA:3.20.10.10 171 339 1.7E-137 T 12-10-2018 BEN31_16900 084e58f30eee533aed4e096e04d44f82 363 PIRSF PIRSF006468 2 358 2.4E-134 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BEN31_16900 084e58f30eee533aed4e096e04d44f82 363 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 4.4E-125 T 12-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 BEN31_16900 084e58f30eee533aed4e096e04d44f82 363 Pfam PF01063 Amino-transferase class IV 70 312 1.1E-36 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BEN31_16900 084e58f30eee533aed4e096e04d44f82 363 SUPERFAMILY SSF56752 5 353 4.58E-118 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BEN31_16900 084e58f30eee533aed4e096e04d44f82 363 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BEN31_02940 f7969588783b30e6c3ee74b3326a496e 574 Gene3D G3DSA:3.40.50.12780 15 457 3.5E-117 T 12-10-2018 BEN31_02940 f7969588783b30e6c3ee74b3326a496e 574 Gene3D G3DSA:3.30.300.30 460 573 6.7E-28 T 12-10-2018 BEN31_02940 f7969588783b30e6c3ee74b3326a496e 574 Pfam PF00501 AMP-binding enzyme 51 464 5.2E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_02940 f7969588783b30e6c3ee74b3326a496e 574 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_02940 f7969588783b30e6c3ee74b3326a496e 574 SUPERFAMILY SSF56801 22 564 4.45E-160 T 12-10-2018 BEN31_02940 f7969588783b30e6c3ee74b3326a496e 574 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 551 1.8E-24 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 2.2E-55 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 2.2E-55 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 2.2E-55 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 2.2E-55 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 2.2E-55 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 2.2E-55 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 202 0.0017 T 12-10-2018 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 Gene3D G3DSA:3.40.50.720 1 259 6.8E-78 T 12-10-2018 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 260 1.9E-109 T 12-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 Pfam PF00106 short chain dehydrogenase 9 202 3.4E-61 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.5E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_15990 382cfa01f4fd38345ee8605e2af1317e 261 SUPERFAMILY SSF51735 8 259 2.27E-77 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_10260 6e0fb33bc03de1ca0d6861a5c68c1540 303 Gene3D G3DSA:3.40.30.10 20 219 5.4E-25 T 12-10-2018 BEN31_10260 6e0fb33bc03de1ca0d6861a5c68c1540 303 SUPERFAMILY SSF52833 19 220 3.17E-27 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_10260 6e0fb33bc03de1ca0d6861a5c68c1540 303 Pfam PF13743 Thioredoxin 24 212 4.6E-69 T 12-10-2018 BEN31_04295 d95d9e64d3fdccb3b99e06734473e2e4 185 SUPERFAMILY SSF53697 5 184 1.21E-37 T 12-10-2018 BEN31_04295 d95d9e64d3fdccb3b99e06734473e2e4 185 Pfam PF01380 SIS domain 34 156 1.7E-18 T 12-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 BEN31_04295 d95d9e64d3fdccb3b99e06734473e2e4 185 Gene3D G3DSA:3.40.50.10490 1 185 1.1E-53 T 12-10-2018 BEN31_04295 d95d9e64d3fdccb3b99e06734473e2e4 185 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 8 185 1.1E-67 T 12-10-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 Gene3D G3DSA:3.90.79.10 241 363 2.9E-26 T 12-10-2018 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 SMART SM00478 48 199 9.8E-53 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 Gene3D G3DSA:1.10.1670.10 19 222 1.4E-88 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 Pfam PF00633 Helix-hairpin-helix motif 108 137 1.3E-6 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 16 277 5.1E-112 T 12-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 Gene3D G3DSA:1.10.340.30 30 141 1.4E-88 T 12-10-2018 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 Pfam PF14815 NUDIX domain 244 357 3.4E-22 T 12-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 173 1.4E-20 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 SUPERFAMILY SSF55811 229 360 4.85E-24 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 SUPERFAMILY SSF48150 15 231 2.2E-72 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BEN31_11655 cf793ff83a5b94412f5e46297f1bd666 366 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 201 217 - T 12-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 Pfam PF00710 Asparaginase, N-terminal 3 187 1.3E-65 T 12-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 PIRSF PIRSF500176 1 325 1.8E-104 T 12-10-2018 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 Gene3D G3DSA:3.40.50.1170 1 199 1.0E-70 T 12-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 PIRSF PIRSF001220 1 327 1.8E-98 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 SMART SM00870 3 316 3.5E-118 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 12-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 Gene3D G3DSA:3.40.50.40 200 328 1.0E-35 T 12-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 12-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 2.1E-15 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.1E-15 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 2.1E-15 T 12-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 SUPERFAMILY SSF53774 2 328 1.2E-98 T 12-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 BEN31_16660 3262c5c680d5e9eee81b1352c61316ae 329 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 328 5.2E-133 T 12-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 BEN31_14940 af703177c9698fddf952205d2391f579 217 SUPERFAMILY SSF52540 1 213 2.45E-47 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14940 af703177c9698fddf952205d2391f579 217 PRINTS PR00094 Adenylate kinase signature 160 175 3.1E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN31_14940 af703177c9698fddf952205d2391f579 217 PRINTS PR00094 Adenylate kinase signature 32 46 3.1E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN31_14940 af703177c9698fddf952205d2391f579 217 PRINTS PR00094 Adenylate kinase signature 177 191 3.1E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN31_14940 af703177c9698fddf952205d2391f579 217 PRINTS PR00094 Adenylate kinase signature 4 17 3.1E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN31_14940 af703177c9698fddf952205d2391f579 217 PRINTS PR00094 Adenylate kinase signature 81 97 3.1E-33 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN31_14940 af703177c9698fddf952205d2391f579 217 Pfam PF00406 Adenylate kinase 5 190 3.8E-61 T 12-10-2018 BEN31_14940 af703177c9698fddf952205d2391f579 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.8E-81 T 12-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BEN31_14940 af703177c9698fddf952205d2391f579 217 Gene3D G3DSA:3.40.50.300 1 213 6.5E-84 T 12-10-2018 BEN31_14940 af703177c9698fddf952205d2391f579 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 53.204 T 12-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN31_14940 af703177c9698fddf952205d2391f579 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 12-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 BEN31_14940 af703177c9698fddf952205d2391f579 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 3.8E-19 T 12-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-7 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 Gene3D G3DSA:3.40.50.720 2 265 6.1E-66 T 12-10-2018 BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.5E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.5E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.5E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.5E-20 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 Pfam PF00106 short chain dehydrogenase 5 192 7.7E-45 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01280 7b2747532d90e7c515b689baffaf6d0a 281 SUPERFAMILY SSF51735 3 242 7.3E-62 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_11025 d65744e074742473e3396a8b36c48b94 499 Pfam PF04055 Radical SAM superfamily 179 350 3.0E-17 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_11025 d65744e074742473e3396a8b36c48b94 499 SUPERFAMILY SSF102114 166 482 5.76E-70 T 12-10-2018 BEN31_11025 d65744e074742473e3396a8b36c48b94 499 SMART SM00729 171 395 1.7E-46 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_11025 d65744e074742473e3396a8b36c48b94 499 Gene3D G3DSA:3.80.30.20 135 488 7.2E-67 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN31_11025 d65744e074742473e3396a8b36c48b94 499 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 89 489 1.3E-148 T 12-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ BEN31_04840 6f9497f9be9915746df12bd53140e2ac 260 SMART SM00382 38 231 2.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_04840 6f9497f9be9915746df12bd53140e2ac 260 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 14 260 4.8E-120 T 12-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 BEN31_04840 6f9497f9be9915746df12bd53140e2ac 260 SUPERFAMILY SSF52540 10 247 1.2E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04840 6f9497f9be9915746df12bd53140e2ac 260 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_04840 6f9497f9be9915746df12bd53140e2ac 260 Gene3D G3DSA:3.40.50.300 11 258 4.1E-60 T 12-10-2018 BEN31_04840 6f9497f9be9915746df12bd53140e2ac 260 Pfam PF00005 ABC transporter 29 185 3.5E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 443 453 - T 12-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 Pfam PF01938 TRAM domain 11 65 9.0E-12 T 12-10-2018 IPR002792 TRAM domain BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 Gene3D G3DSA:3.40.50.150 88 455 4.8E-114 T 12-10-2018 BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 SUPERFAMILY SSF50249 5 65 3.2E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 392 423 - T 12-10-2018 IPR030390 RNA methyltransferase TrmA, active site BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 Gene3D G3DSA:2.40.50.140 2 86 2.9E-24 T 12-10-2018 BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 23 453 8.0E-194 T 12-10-2018 BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 SUPERFAMILY SSF53335 75 460 1.86E-78 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 Gene3D G3DSA:3.40.1350.30 137 293 4.8E-114 T 12-10-2018 BEN31_11920 f3b5ed41a1eaca85f1d7c7b96666ca2f 461 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 267 459 1.5E-19 T 12-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 SUPERFAMILY SSF54999 5 102 6.41E-39 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 7.9E-37 T 12-10-2018 IPR027486 Ribosomal protein S10 domain BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.3E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.3E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.3E-20 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 SMART SM01403 7 101 5.7E-61 T 12-10-2018 IPR027486 Ribosomal protein S10 domain BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.4E-47 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.352 T 12-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 Gene3D G3DSA:3.30.70.600 1 102 1.1E-38 T 12-10-2018 IPR036838 Ribosomal protein S10 domain superfamily BEN31_15050 e3951e97f9f82491c34b4f58bf503c25 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 12-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SUPERFAMILY SSF50249 10 109 6.86E-18 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SUPERFAMILY SSF50249 254 356 4.19E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SUPERFAMILY SSF50249 88 170 1.42E-15 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 81 100 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 325 343 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 151 171 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 105 121 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 122 139 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 208 229 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 16 34 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 PRINTS PR00681 Ribosomal protein S1 signature 286 305 7.8E-51 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SUPERFAMILY SSF50249 185 273 4.94E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Gene3D G3DSA:2.40.50.140 95 180 6.0E-12 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SMART SM00316 100 167 1.9E-8 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SMART SM00316 14 84 9.1E-14 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SMART SM00316 186 256 1.1E-28 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 SMART SM00316 271 342 2.1E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Pfam PF00575 S1 RNA binding domain 98 167 2.3E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Pfam PF00575 S1 RNA binding domain 269 342 4.0E-24 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Pfam PF00575 S1 RNA binding domain 13 83 7.9E-15 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Pfam PF00575 S1 RNA binding domain 184 256 3.2E-26 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Gene3D G3DSA:2.40.50.140 2 94 9.0E-16 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Gene3D G3DSA:2.40.50.140 182 265 5.6E-30 T 12-10-2018 BEN31_05830 2fbd94e734a1e8077c212db6ef9ed28a 383 Gene3D G3DSA:2.40.50.140 267 352 2.6E-29 T 12-10-2018 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 101 425 7.8E-81 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 1 56 2.1E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 Gene3D G3DSA:1.10.260.40 1 71 2.4E-8 T 12-10-2018 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 SUPERFAMILY SSF53335 100 430 6.41E-90 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 255 268 1.1E-15 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 100 116 1.1E-15 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 209 223 1.1E-15 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 Pfam PF00145 C-5 cytosine-specific DNA methylase 99 427 7.6E-83 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 Gene3D G3DSA:3.90.120.10 250 417 2.8E-88 T 12-10-2018 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 170 182 - T 12-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 SUPERFAMILY SSF47413 8 57 1.89E-7 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 408 426 - T 12-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 BEN31_14570 d4219a252c9f5acbf7c1c7b58b1896eb 434 Gene3D G3DSA:3.40.50.150 102 423 2.8E-88 T 12-10-2018 BEN31_05385 112ee0d493151b803c53762b013bced1 344 Gene3D G3DSA:3.20.20.70 8 344 1.3E-126 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_05385 112ee0d493151b803c53762b013bced1 344 SUPERFAMILY SSF51395 9 337 7.33E-111 T 12-10-2018 BEN31_05385 112ee0d493151b803c53762b013bced1 344 Hamap MF_01614 NADPH dehydrogenase [namA]. 8 344 65.896 T 12-10-2018 IPR023663 NADPH dehydrogenase GO:0003959|GO:0055114 BEN31_05385 112ee0d493151b803c53762b013bced1 344 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 331 2.8E-95 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BEN31_07525 70033cde60c820486db1f574309ccb16 137 SUPERFAMILY SSF46785 7 133 4.75E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07525 70033cde60c820486db1f574309ccb16 137 Pfam PF02082 Transcriptional regulator 3 81 4.3E-22 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_07525 70033cde60c820486db1f574309ccb16 137 Gene3D G3DSA:1.10.10.10 1 137 4.4E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 Pfam PF01336 OB-fold nucleic acid binding domain 961 1028 2.9E-10 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 SUPERFAMILY SSF89550 4 249 1.84E-18 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 SMART SM00481 4 71 1.6E-24 T 12-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 Gene3D G3DSA:3.20.20.140 1 259 3.5E-75 T 12-10-2018 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 Gene3D G3DSA:1.10.150.870 760 849 5.3E-9 T 12-10-2018 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 281 702 2.0E-176 T 12-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 Pfam PF02811 PHP domain 5 166 1.6E-36 T 12-10-2018 IPR004013 PHP domain GO:0003824 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 989 0.0 T 12-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 Pfam PF14579 Helix-hairpin-helix motif 776 863 1.1E-24 T 12-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_03200 3222b097d4af74eb96735c6b55771eed 1111 Gene3D G3DSA:1.10.10.1600 413 490 1.9E-26 T 12-10-2018 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SMART SM00388 364 431 8.3E-22 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Gene3D G3DSA:3.30.565.10 437 592 3.9E-48 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SUPERFAMILY SSF158472 195 242 6.54E-10 T 12-10-2018 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Pfam PF00989 PAS fold 253 355 2.1E-9 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Pfam PF00672 HAMP domain 195 241 4.8E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SMART SM00387 477 589 1.0E-42 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SUPERFAMILY SSF47384 348 432 2.55E-21 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 542 4.5E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 567 4.5E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 514 528 4.5E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 586 4.5E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 588 6.9E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SUPERFAMILY SSF55874 420 587 7.33E-50 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SUPERFAMILY SSF55785 241 356 1.05E-10 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 365 431 3.2E-19 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Gene3D G3DSA:3.30.450.20 249 359 2.3E-13 T 12-10-2018 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SMART SM00091 253 320 9.3E-7 T 12-10-2018 IPR000014 PAS domain BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Gene3D G3DSA:1.20.1480.50 155 248 4.1E-18 T 12-10-2018 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 SMART SM00304 194 246 3.8E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_05720 5260c6815d56d5e4730de339b2082773 593 Gene3D G3DSA:1.10.287.130 360 436 7.5E-26 T 12-10-2018 BEN31_12095 805b1d03a9bf4ca89359e4474038cba3 660 Gene3D G3DSA:3.40.720.10 244 552 8.2E-82 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_12095 805b1d03a9bf4ca89359e4474038cba3 660 SUPERFAMILY SSF53649 250 640 1.64E-77 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_12095 805b1d03a9bf4ca89359e4474038cba3 660 Pfam PF00884 Sulfatase 253 541 8.1E-44 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BEN31_12095 805b1d03a9bf4ca89359e4474038cba3 660 PIRSF PIRSF005091 1 626 1.4E-186 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like BEN31_04895 7874d8add8c9b46e770f429d1e4fa493 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 1.5E-36 T 12-10-2018 IPR002767 Thiamine-binding protein BEN31_04895 7874d8add8c9b46e770f429d1e4fa493 104 Gene3D G3DSA:3.30.70.930 1 104 1.6E-38 T 12-10-2018 IPR029756 MTH1187/YkoF-like BEN31_04895 7874d8add8c9b46e770f429d1e4fa493 104 SUPERFAMILY SSF89957 1 103 1.96E-31 T 12-10-2018 IPR029756 MTH1187/YkoF-like BEN31_04895 7874d8add8c9b46e770f429d1e4fa493 104 Pfam PF01910 Thiamine-binding protein 4 98 4.6E-34 T 12-10-2018 IPR002767 Thiamine-binding protein BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 Gene3D G3DSA:2.10.109.10 77 201 1.3E-37 T 12-10-2018 BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 SUPERFAMILY SSF51306 45 198 5.23E-52 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 30 194 8.1E-56 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 ProSitePatterns PS00761 Signal peptidases I signature 3. 158 171 - T 12-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 153 172 1.9E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 99 111 1.9E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 47 63 1.9E-25 T 12-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 Pfam PF00717 Peptidase S24-like 54 123 4.3E-20 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 ProSitePatterns PS00760 Signal peptidases I lysine active site. 101 113 - T 12-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 BEN31_09095 85b175a4767d0e1089298ae577a51e95 201 ProSitePatterns PS00501 Signal peptidases I serine active site. 56 63 - T 12-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 BEN31_05305 c74ac140b7e3608993e72d918627f44a 154 Pfam PF01584 CheW-like domain 6 138 7.1E-25 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_05305 c74ac140b7e3608993e72d918627f44a 154 Gene3D G3DSA:2.30.30.40 7 130 1.5E-26 T 12-10-2018 BEN31_05305 c74ac140b7e3608993e72d918627f44a 154 SUPERFAMILY SSF50341 2 139 5.1E-28 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN31_05305 c74ac140b7e3608993e72d918627f44a 154 Gene3D G3DSA:2.40.50.180 24 90 1.5E-26 T 12-10-2018 BEN31_05305 c74ac140b7e3608993e72d918627f44a 154 SMART SM00260 1 136 9.2E-18 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_17770 b4dc2ecc4a9ac82f332ef4851c9ed180 220 Gene3D G3DSA:1.10.3720.10 6 218 2.4E-57 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_17770 b4dc2ecc4a9ac82f332ef4851c9ed180 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 216 2.8E-24 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_17770 b4dc2ecc4a9ac82f332ef4851c9ed180 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 110 2.4E-27 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_17770 b4dc2ecc4a9ac82f332ef4851c9ed180 220 SUPERFAMILY SSF161098 16 201 1.31E-47 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_03765 02361d3182866fe444d5dc6c8da83ac3 339 Gene3D G3DSA:3.30.70.1070 187 253 5.1E-5 T 12-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 BEN31_03765 02361d3182866fe444d5dc6c8da83ac3 339 Pfam PF05036 Sporulation related domain 186 234 1.7E-5 T 12-10-2018 IPR007730 Sporulation-like domain GO:0042834 BEN31_05255 ed69f317059414dd337bd04f94486c11 297 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 128 4.5E-32 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BEN31_05255 ed69f317059414dd337bd04f94486c11 297 Gene3D G3DSA:3.40.50.10330 8 126 1.5E-76 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BEN31_05255 ed69f317059414dd337bd04f94486c11 297 Gene3D G3DSA:2.60.200.40 127 280 1.5E-76 T 12-10-2018 BEN31_05255 ed69f317059414dd337bd04f94486c11 297 SMART SM00046 6 138 1.6E-21 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BEN31_05255 ed69f317059414dd337bd04f94486c11 297 SUPERFAMILY SSF111331 4 296 3.01E-66 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BEN31_05255 ed69f317059414dd337bd04f94486c11 297 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 296 1.3E-91 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SMART SM00091 264 330 1.8E-6 T 12-10-2018 IPR000014 PAS domain BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Gene3D G3DSA:1.10.8.500 205 256 8.7E-9 T 12-10-2018 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SUPERFAMILY SSF55874 433 601 3.01E-49 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 263 375 3.6E-6 T 12-10-2018 IPR000014 PAS domain BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SUPERFAMILY SSF158472 205 254 1.27E-9 T 12-10-2018 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 378 443 1.9E-18 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Gene3D G3DSA:3.30.565.10 452 602 7.4E-52 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Gene3D G3DSA:3.30.450.20 32 183 6.3E-35 T 12-10-2018 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 2.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 2.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 2.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 2.0E-19 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SUPERFAMILY SSF55785 251 369 2.62E-10 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Gene3D G3DSA:1.10.287.130 369 448 1.8E-28 T 12-10-2018 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 490 601 9.7E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SMART SM00388 377 444 1.9E-21 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SMART SM00387 489 603 1.3E-44 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Pfam PF00672 HAMP domain 205 253 5.1E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SUPERFAMILY SSF47384 363 444 7.26E-20 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Pfam PF13426 PAS domain 275 370 1.3E-6 T 12-10-2018 IPR000014 PAS domain BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 SMART SM00304 205 257 1.0E-12 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_16075 25a7f58ca9027bf1df3bc60e808079bc 612 Gene3D G3DSA:3.30.450.20 272 368 5.5E-21 T 12-10-2018 BEN31_13345 abdf3bb77177cf436c2fef9f3fa10b35 116 SUPERFAMILY SSF50118 2 113 4.91E-41 T 12-10-2018 BEN31_13345 abdf3bb77177cf436c2fef9f3fa10b35 116 PIRSF PIRSF033490 1 113 1.7E-39 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 BEN31_13345 abdf3bb77177cf436c2fef9f3fa10b35 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 8.3E-33 T 12-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 BEN31_13345 abdf3bb77177cf436c2fef9f3fa10b35 116 Gene3D G3DSA:2.30.30.110 1 116 1.1E-51 T 12-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 SUPERFAMILY SSF47323 431 557 6.34E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 SUPERFAMILY SSF55190 7 115 7.59E-28 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 Gene3D G3DSA:3.30.1360.70 2 114 1.2E-28 T 12-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 SUPERFAMILY SSF52374 118 448 2.45E-95 T 12-10-2018 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 Hamap MF_00123 Arginine--tRNA ligase [argS]. 10 557 28.261 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 SMART SM00836 437 557 1.3E-55 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 Pfam PF05746 DALR anticodon binding domain 438 557 1.4E-38 T 12-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 2.5E-24 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 2.5E-24 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 2.5E-24 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 2.5E-24 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 Gene3D G3DSA:1.10.730.10 432 557 8.1E-176 T 12-10-2018 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 Pfam PF00750 tRNA synthetases class I (R) 104 400 7.6E-27 T 12-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 Gene3D G3DSA:3.40.50.620 124 431 8.1E-176 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 557 1.5E-179 T 12-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 SMART SM01016 5 95 1.3E-35 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN31_17400 84a6f3e4aaf49c8d00e1ca4f2e7bada3 557 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 94 4.2E-25 T 12-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN31_15045 a1fbf25f0e8725067f8b1ea49cb489e4 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 5.3E-87 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15045 a1fbf25f0e8725067f8b1ea49cb489e4 209 Gene3D G3DSA:2.40.50.620 33 96 7.4E-15 T 12-10-2018 BEN31_15045 a1fbf25f0e8725067f8b1ea49cb489e4 209 SUPERFAMILY SSF50447 1 207 2.56E-80 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_15045 a1fbf25f0e8725067f8b1ea49cb489e4 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 12-10-2018 IPR019926 Ribosomal protein L3, conserved site BEN31_15045 a1fbf25f0e8725067f8b1ea49cb489e4 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 39.024 T 12-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15045 a1fbf25f0e8725067f8b1ea49cb489e4 209 Pfam PF00297 Ribosomal protein L3 99 181 2.5E-16 T 12-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15045 a1fbf25f0e8725067f8b1ea49cb489e4 209 Gene3D G3DSA:2.40.30.10 130 209 2.6E-18 T 12-10-2018 BEN31_01350 a2f31a48b28dcd8feb082b38bb0c349b 113 Gene3D G3DSA:3.30.1050.10 8 102 1.3E-7 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BEN31_01350 a2f31a48b28dcd8feb082b38bb0c349b 113 Pfam PF02036 SCP-2 sterol transfer family 25 101 1.4E-6 T 12-10-2018 IPR003033 SCP2 sterol-binding domain BEN31_01350 a2f31a48b28dcd8feb082b38bb0c349b 113 SUPERFAMILY SSF55718 52 108 1.48E-6 T 12-10-2018 IPR036527 SCP2 sterol-binding domain superfamily BEN31_16095 842f70c7fbe4a2494023a48881229314 395 Gene3D G3DSA:2.40.10.10 62 169 8.4E-24 T 12-10-2018 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 SMART SM00228 290 378 4.9E-10 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 SUPERFAMILY SSF50156 289 387 1.45E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 PRINTS PR00834 HtrA/DegQ protease family signature 179 203 1.4E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 PRINTS PR00834 HtrA/DegQ protease family signature 336 348 1.4E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 1.4E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 PRINTS PR00834 HtrA/DegQ protease family signature 117 129 1.4E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 PRINTS PR00834 HtrA/DegQ protease family signature 138 158 1.4E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 1.4E-35 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 SUPERFAMILY SSF50494 73 285 4.18E-53 T 12-10-2018 IPR009003 Peptidase S1, PA clan BEN31_16095 842f70c7fbe4a2494023a48881229314 395 Pfam PF13365 Trypsin-like peptidase domain 105 252 8.0E-31 T 12-10-2018 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 Pfam PF13180 PDZ domain 290 387 7.6E-21 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 Gene3D G3DSA:2.40.10.10 170 292 2.7E-38 T 12-10-2018 BEN31_16095 842f70c7fbe4a2494023a48881229314 395 Gene3D G3DSA:2.30.42.10 293 392 9.5E-26 T 12-10-2018 BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 SUPERFAMILY SSF53335 138 446 4.76E-77 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 SUPERFAMILY SSF48013 3 130 4.19E-37 T 12-10-2018 IPR035926 NusB-like superfamily BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 Gene3D G3DSA:3.40.50.150 145 445 1.6E-87 T 12-10-2018 BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 447 1.6E-183 T 12-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 Pfam PF01029 NusB family 5 128 1.1E-31 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324 336 2.7E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 2.7E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 2.7E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 390 2.7E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 428 445 2.7E-31 T 12-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 323 334 - T 12-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 Pfam PF01189 16S rRNA methyltransferase RsmB/F 245 443 6.8E-63 T 12-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 BEN31_08430 2375a45baf6ea4fd58ae3824f061a1e2 447 Gene3D G3DSA:1.10.940.10 1 142 3.5E-41 T 12-10-2018 IPR035926 NusB-like superfamily BEN31_03305 d065b378035726fdbc0c79cc839bad25 152 Pfam PF03477 ATP cone domain 50 136 8.5E-18 T 12-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 BEN31_03305 d065b378035726fdbc0c79cc839bad25 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 4.8E-74 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BEN31_03305 d065b378035726fdbc0c79cc839bad25 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 84.251 T 12-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 BEN31_11900 120da954c2bc0a0e7a979feebce4da9b 282 SUPERFAMILY SSF48371 86 273 2.13E-35 T 12-10-2018 IPR016024 Armadillo-type fold BEN31_11900 120da954c2bc0a0e7a979feebce4da9b 282 Pfam PF08713 DNA alkylation repair enzyme 148 249 1.1E-6 T 12-10-2018 IPR014825 DNA alkylation repair enzyme BEN31_11900 120da954c2bc0a0e7a979feebce4da9b 282 Gene3D G3DSA:1.25.40.290 151 273 1.4E-32 T 12-10-2018 BEN31_15075 43e90606294572f7b223a229709d80a9 139 PIRSF PIRSF002133 1 137 1.8E-48 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 Gene3D G3DSA:2.40.50.140 1 139 2.1E-61 T 12-10-2018 BEN31_15075 43e90606294572f7b223a229709d80a9 139 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 SUPERFAMILY SSF50249 2 137 3.34E-48 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_15075 43e90606294572f7b223a229709d80a9 139 PRINTS PR01034 Ribosomal protein S12 signature 40 55 9.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 PRINTS PR01034 Ribosomal protein S12 signature 55 70 9.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 PRINTS PR01034 Ribosomal protein S12 signature 90 107 9.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 PRINTS PR01034 Ribosomal protein S12 signature 123 135 9.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 PRINTS PR01034 Ribosomal protein S12 signature 71 90 9.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 PRINTS PR01034 Ribosomal protein S12 signature 107 123 9.1E-58 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15075 43e90606294572f7b223a229709d80a9 139 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.429 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15075 43e90606294572f7b223a229709d80a9 139 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 136 1.4E-67 T 12-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15075 43e90606294572f7b223a229709d80a9 139 Pfam PF00164 Ribosomal protein S12/S23 37 136 5.4E-37 T 12-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 Pfam PF08245 Mur ligase middle domain 108 313 2.5E-56 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 Gene3D G3DSA:3.90.190.20 339 490 5.6E-59 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 106 130 - T 12-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 Gene3D G3DSA:3.40.1190.10 99 338 5.2E-90 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 Gene3D G3DSA:3.40.1390.10 2 98 2.0E-28 T 12-10-2018 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 485 36.31 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 SUPERFAMILY SSF53244 334 487 6.41E-48 T 12-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 Pfam PF01225 Mur ligase family, catalytic domain 24 96 1.9E-15 T 12-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 419 1.3E-24 T 12-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 SUPERFAMILY SSF53623 99 333 3.14E-75 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 485 3.6E-179 T 12-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 BEN31_08735 dbd74671643af595062b95c32f174b3e 491 SUPERFAMILY SSF63418 10 99 2.88E-25 T 12-10-2018 IPR035911 MurE/MurF, N-terminal BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 101 112 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 Gene3D G3DSA:3.30.470.20 123 349 1.2E-82 T 12-10-2018 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 289 317 - T 12-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 Pfam PF07478 D-ala D-ala ligase C-terminus 142 343 3.6E-80 T 12-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 SUPERFAMILY SSF52440 2 133 2.01E-36 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 PIRSF PIRSF039102 1 355 5.1E-116 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 Gene3D G3DSA:3.30.1490.20 149 221 1.2E-82 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 Pfam PF01820 D-ala D-ala ligase N-terminus 5 123 9.8E-31 T 12-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 347 41.621 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 Gene3D G3DSA:3.40.50.20 1 122 3.3E-37 T 12-10-2018 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 346 2.7E-118 T 12-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_13405 5d2a0038083210e1b68861a1fca5b52d 360 SUPERFAMILY SSF56059 134 351 2.79E-61 T 12-10-2018 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 205 221 - T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 Gene3D G3DSA:3.30.70.1660 90 319 2.6E-99 T 12-10-2018 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 Pfam PF03462 PCRF domain 1 179 4.4E-62 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 Gene3D G3DSA:3.30.160.20 186 281 2.6E-99 T 12-10-2018 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 Gene3D G3DSA:1.20.58.410 1 83 6.8E-16 T 12-10-2018 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 SMART SM00937 45 155 4.1E-60 T 12-10-2018 IPR005139 Peptide chain release factor GO:0006415 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 Pfam PF00472 RF-1 domain 189 298 3.8E-43 T 12-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 SUPERFAMILY SSF75620 1 324 1.83E-136 T 12-10-2018 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 325 3.3E-172 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BEN31_18355 77966a67df9e41de8e1cfb6145476287 327 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 326 37.576 T 12-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 BEN31_04790 11c476721331496f261670ad8cf6d5d5 181 Pfam PF13302 Acetyltransferase (GNAT) domain 8 152 1.5E-23 T 12-10-2018 IPR000182 GNAT domain BEN31_04790 11c476721331496f261670ad8cf6d5d5 181 Gene3D G3DSA:3.40.630.30 4 179 9.6E-49 T 12-10-2018 BEN31_04790 11c476721331496f261670ad8cf6d5d5 181 SUPERFAMILY SSF55729 5 176 3.6E-44 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_01535 df9ae4f64eac00a3f563c336dc896bca 327 SUPERFAMILY SSF52283 3 139 1.46E-35 T 12-10-2018 BEN31_01535 df9ae4f64eac00a3f563c336dc896bca 327 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 12-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 BEN31_01535 df9ae4f64eac00a3f563c336dc896bca 327 Gene3D G3DSA:3.40.50.720 100 289 4.0E-123 T 12-10-2018 BEN31_01535 df9ae4f64eac00a3f563c336dc896bca 327 Gene3D G3DSA:3.40.50.720 6 315 4.0E-123 T 12-10-2018 BEN31_01535 df9ae4f64eac00a3f563c336dc896bca 327 SUPERFAMILY SSF51735 103 290 3.78E-63 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_01535 df9ae4f64eac00a3f563c336dc896bca 327 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 3.1E-66 T 12-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 BEN31_01535 df9ae4f64eac00a3f563c336dc896bca 327 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 320 1.6E-32 T 12-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 BEN31_05445 22744685993f261b967ad074aafa8869 159 Pfam PF00583 Acetyltransferase (GNAT) family 31 123 1.2E-16 T 12-10-2018 IPR000182 GNAT domain BEN31_05445 22744685993f261b967ad074aafa8869 159 SUPERFAMILY SSF55729 1 155 4.49E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_05445 22744685993f261b967ad074aafa8869 159 Gene3D G3DSA:3.40.630.30 1 155 8.2E-44 T 12-10-2018 BEN31_05445 22744685993f261b967ad074aafa8869 159 PIRSF PIRSF037663 1 157 1.3E-69 T 12-10-2018 IPR017255 Acetyltransferase, GNAT, predicted BEN31_04115 f12dcf0afe53db1fd12c8983591e50e0 362 Pfam PF02803 Thiolase, C-terminal domain 239 358 5.4E-24 T 12-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 BEN31_04115 f12dcf0afe53db1fd12c8983591e50e0 362 Gene3D G3DSA:3.40.47.10 4 243 8.2E-101 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_04115 f12dcf0afe53db1fd12c8983591e50e0 362 Gene3D G3DSA:3.40.47.10 118 357 8.2E-101 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_04115 f12dcf0afe53db1fd12c8983591e50e0 362 SUPERFAMILY SSF53901 5 357 1.67E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_04115 f12dcf0afe53db1fd12c8983591e50e0 362 Pfam PF00108 Thiolase, N-terminal domain 4 229 1.6E-43 T 12-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 BEN31_04115 f12dcf0afe53db1fd12c8983591e50e0 362 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 358 3.3E-89 T 12-10-2018 IPR002155 Thiolase GO:0016747 BEN31_04115 f12dcf0afe53db1fd12c8983591e50e0 362 PIRSF PIRSF000429 1 362 1.8E-86 T 12-10-2018 IPR002155 Thiolase GO:0016747 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Gene3D G3DSA:1.10.8.60 715 810 2.9E-28 T 12-10-2018 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 7.3E-16 T 12-10-2018 IPR004176 Clp, N-terminal BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 144 2.0E-18 T 12-10-2018 IPR004176 Clp, N-terminal BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Gene3D G3DSA:3.40.50.300 490 713 2.6E-90 T 12-10-2018 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 572 590 - T 12-10-2018 IPR028299 ClpA/B, conserved site 2 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 12-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Pfam PF02151 UvrB/uvrC motif 418 452 8.9E-7 T 12-10-2018 IPR001943 UVR domain GO:0005515 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Gene3D G3DSA:1.10.8.60 347 482 1.3E-53 T 12-10-2018 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 SMART SM00382 201 344 4.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 SMART SM00382 538 716 1.7E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 SUPERFAMILY SSF52540 487 803 1.21E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 715 794 1.0E-25 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 587 605 6.1E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 663 6.1E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 616 634 6.1E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 542 560 6.1E-43 T 12-10-2018 IPR001270 ClpA/B family GO:0005524 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 SUPERFAMILY SSF52540 162 466 9.16E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Pfam PF07724 AAA domain (Cdc48 subfamily) 537 709 1.8E-57 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Gene3D G3DSA:1.10.1780.10 1 151 9.0E-61 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Gene3D G3DSA:3.40.50.300 152 344 1.1E-71 T 12-10-2018 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 SMART SM01086 715 804 2.0E-36 T 12-10-2018 IPR019489 Clp ATPase, C-terminal BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 318 1.7E-13 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 SUPERFAMILY SSF81923 5 147 2.26E-31 T 12-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 BEN31_15190 4d1f99fa97366ce86f8f87100d4d2a89 811 Gene3D G3DSA:4.10.860.10 410 468 1.3E-53 T 12-10-2018 BEN31_00710 3322aec4e88fcb616df37cff6910913e 156 Pfam PF01668 SmpB protein 10 150 2.8E-64 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN31_00710 3322aec4e88fcb616df37cff6910913e 156 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 12-10-2018 IPR020081 SsrA-binding protein, conserved site BEN31_00710 3322aec4e88fcb616df37cff6910913e 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 1.4E-61 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN31_00710 3322aec4e88fcb616df37cff6910913e 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 78.772 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN31_00710 3322aec4e88fcb616df37cff6910913e 156 SUPERFAMILY SSF74982 4 132 1.31E-54 T 12-10-2018 IPR023620 Small protein B BEN31_00710 3322aec4e88fcb616df37cff6910913e 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 124 3.0E-57 T 12-10-2018 IPR000037 SsrA-binding protein GO:0003723 BEN31_00710 3322aec4e88fcb616df37cff6910913e 156 Gene3D G3DSA:2.40.280.10 3 129 1.6E-52 T 12-10-2018 IPR023620 Small protein B BEN31_03240 f49d4a73918c91273250d32ef8bf3152 154 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 18.757 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BEN31_03240 f49d4a73918c91273250d32ef8bf3152 154 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 131 1.0E-38 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BEN31_03240 f49d4a73918c91273250d32ef8bf3152 154 Pfam PF04284 Protein of unknown function (DUF441) 7 146 7.8E-48 T 12-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 Pfam PF03466 LysR substrate binding domain 88 289 2.5E-37 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 SUPERFAMILY SSF46785 1 82 1.6E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 Gene3D G3DSA:1.10.10.10 1 89 1.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 Gene3D G3DSA:3.40.190.10 90 283 8.6E-58 T 12-10-2018 BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.4E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 Gene3D G3DSA:3.40.190.10 160 265 8.6E-58 T 12-10-2018 BEN31_13025 7119080aaeb2e35a22940df736b2b8d5 297 SUPERFAMILY SSF53850 89 290 9.23E-33 T 12-10-2018 BEN31_00430 2b5db401f7d92a2e8082353e19ff61e1 333 Gene3D G3DSA:1.10.3470.10 3 333 5.9E-95 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_00430 2b5db401f7d92a2e8082353e19ff61e1 333 SUPERFAMILY SSF81345 4 331 1.44E-79 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_00430 2b5db401f7d92a2e8082353e19ff61e1 333 Pfam PF01032 FecCD transport family 18 331 2.2E-89 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 SUPERFAMILY SSF53187 8 393 1.2E-87 T 12-10-2018 BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 Pfam PF07687 Peptidase dimerisation domain 193 285 8.1E-8 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 SUPERFAMILY SSF55031 188 306 1.96E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 382 7.8E-119 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 PIRSF PIRSF005962 5 395 4.8E-133 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 Gene3D G3DSA:3.40.630.10 21 379 1.4E-144 T 12-10-2018 BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 Pfam PF01546 Peptidase family M20/M25/M40 79 391 4.3E-32 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_10905 6f36f0302022385ec4e386be5e610d57 395 Gene3D G3DSA:3.30.70.360 188 302 1.4E-144 T 12-10-2018 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 Pfam PF01330 RuvA N terminal domain 2 59 8.3E-18 T 12-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 SMART SM00278 105 124 0.45 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 SMART SM00278 70 89 0.8 T 12-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 SUPERFAMILY SSF47781 62 134 2.19E-20 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 Pfam PF07499 RuvA, C-terminal domain 155 199 4.3E-11 T 12-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 5.2E-64 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 Gene3D G3DSA:1.10.8.10 150 199 5.6E-7 T 12-10-2018 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 Gene3D G3DSA:2.40.50.140 1 62 3.9E-16 T 12-10-2018 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 Gene3D G3DSA:1.10.150.20 63 133 6.1E-24 T 12-10-2018 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 Pfam PF14520 Helix-hairpin-helix domain 69 126 1.8E-13 T 12-10-2018 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 27.951 T 12-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 SUPERFAMILY SSF50249 2 60 5.71E-14 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_03905 34532fb59295ac0feb6c30f08e5b4b0d 201 SUPERFAMILY SSF46929 153 199 1.7E-8 T 12-10-2018 IPR036267 RuvA, C-terminal domain superfamily BEN31_13415 80b73fc89fdefed6c913dacf0d2c0e55 49 Pfam PF13040 Fur-regulated basic protein B 3 39 8.5E-17 T 12-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS BEN31_05215 03aa595fba4e367f4836d6e97370094b 297 Gene3D G3DSA:3.40.718.10 3 296 2.3E-106 T 12-10-2018 BEN31_05215 03aa595fba4e367f4836d6e97370094b 297 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 75 7.2E-7 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN31_05215 03aa595fba4e367f4836d6e97370094b 297 Pfam PF01515 Phosphate acetyl/butaryl transferase 78 293 6.0E-50 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN31_05215 03aa595fba4e367f4836d6e97370094b 297 SUPERFAMILY SSF53659 3 295 3.33E-65 T 12-10-2018 BEN31_05215 03aa595fba4e367f4836d6e97370094b 297 PIRSF PIRSF000428 1 297 1.2E-84 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN31_05215 03aa595fba4e367f4836d6e97370094b 297 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 3 296 9.6E-131 T 12-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 BEN31_15865 f0733fa96f3a5ba311a2115656a228ca 181 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 181 1.9E-52 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BEN31_15865 f0733fa96f3a5ba311a2115656a228ca 181 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.804 T 12-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 BEN31_15865 f0733fa96f3a5ba311a2115656a228ca 181 SUPERFAMILY SSF50249 1 181 5.83E-57 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_15865 f0733fa96f3a5ba311a2115656a228ca 181 Pfam PF00436 Single-strand binding protein family 2 103 5.5E-38 T 12-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 BEN31_15865 f0733fa96f3a5ba311a2115656a228ca 181 PIRSF PIRSF002070 1 170 3.4E-38 T 12-10-2018 BEN31_15865 f0733fa96f3a5ba311a2115656a228ca 181 Gene3D G3DSA:2.40.50.140 1 110 2.0E-46 T 12-10-2018 BEN31_11275 c797bc2df1088eeacba84b93a47bf29a 221 Gene3D G3DSA:1.10.150.240 15 84 1.8E-52 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN31_11275 c797bc2df1088eeacba84b93a47bf29a 221 Gene3D G3DSA:3.40.50.1000 3 202 1.8E-52 T 12-10-2018 IPR023214 HAD superfamily BEN31_11275 c797bc2df1088eeacba84b93a47bf29a 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 6.9E-32 T 12-10-2018 BEN31_11275 c797bc2df1088eeacba84b93a47bf29a 221 SUPERFAMILY SSF56784 2 207 7.09E-46 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_11275 c797bc2df1088eeacba84b93a47bf29a 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 64 159 8.5E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN31_11275 c797bc2df1088eeacba84b93a47bf29a 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 58 184 7.2E-17 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN31_03820 0c2b9a1fb6a8b49012c170dc10353e28 112 SUPERFAMILY SSF118010 1 111 1.96E-30 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily BEN31_03820 0c2b9a1fb6a8b49012c170dc10353e28 112 Gene3D G3DSA:3.30.70.1490 1 112 2.1E-33 T 12-10-2018 IPR036764 Cysteine protease Prp superfamily BEN31_03820 0c2b9a1fb6a8b49012c170dc10353e28 112 Pfam PF04327 Cysteine protease Prp 1 106 3.8E-25 T 12-10-2018 IPR007422 Cysteine protease Prp BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SUPERFAMILY SSF55681 475 694 3.33E-49 T 12-10-2018 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Gene3D G3DSA:3.30.56.10 4 189 6.1E-69 T 12-10-2018 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SMART SM00896 710 803 2.8E-45 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Pfam PF03483 B3/4 domain 222 394 1.8E-62 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Gene3D G3DSA:3.50.40.10 204 405 6.2E-81 T 12-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Gene3D G3DSA:3.30.930.10 495 698 8.5E-60 T 12-10-2018 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Pfam PF01588 Putative tRNA binding domain 46 152 1.9E-27 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SUPERFAMILY SSF54991 705 803 1.44E-31 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 4.0E-22 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 8.0E-268 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SUPERFAMILY SSF56037 210 405 4.18E-69 T 12-10-2018 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SUPERFAMILY SSF46955 412 483 3.85E-22 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Gene3D G3DSA:3.30.70.380 711 803 7.1E-31 T 12-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Gene3D G3DSA:3.30.56.10 410 483 1.4E-27 T 12-10-2018 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Gene3D G3DSA:2.40.50.140 40 161 6.1E-69 T 12-10-2018 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SMART SM00873 221 394 1.5E-84 T 12-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SUPERFAMILY SSF50249 36 200 3.67E-48 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 SMART SM00874 411 479 1.1E-30 T 12-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 46.169 T 12-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BEN31_03415 e049a62958ccf4ba712b5bec7f66667b 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 7.3E-29 T 12-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 BEN31_17780 de002b19885075b169cba7be28b58540 462 Gene3D G3DSA:1.20.1250.20 256 450 4.3E-23 T 12-10-2018 BEN31_17780 de002b19885075b169cba7be28b58540 462 Gene3D G3DSA:1.20.1720.10 11 251 1.1E-40 T 12-10-2018 BEN31_17780 de002b19885075b169cba7be28b58540 462 SUPERFAMILY SSF103473 4 452 6.54E-64 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_17780 de002b19885075b169cba7be28b58540 462 Pfam PF07690 Major Facilitator Superfamily 15 409 1.7E-60 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_06565 abbd0548ac43819f5051b647b4ff1a17 221 Gene3D G3DSA:3.40.50.10320 1 213 3.1E-46 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BEN31_06565 abbd0548ac43819f5051b647b4ff1a17 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 3 219 3.2E-108 T 12-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 BEN31_06565 abbd0548ac43819f5051b647b4ff1a17 221 SUPERFAMILY SSF102588 2 194 3.14E-48 T 12-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 BEN31_06565 abbd0548ac43819f5051b647b4ff1a17 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 135 6.0E-27 T 12-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Gene3D G3DSA:1.10.287.130 902 977 3.0E-18 T 12-10-2018 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Gene3D G3DSA:3.30.565.10 978 1126 6.7E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SUPERFAMILY SSF52738 18 190 6.67E-11 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SUPERFAMILY SSF55785 780 898 2.62E-14 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Pfam PF00512 His Kinase A (phospho-acceptor) domain 916 975 1.2E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Gene3D G3DSA:3.30.450.20 789 901 7.0E-14 T 12-10-2018 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Pfam PF08448 PAS fold 792 901 1.3E-7 T 12-10-2018 IPR013656 PAS fold-4 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SUPERFAMILY SSF55874 967 1125 1.11E-34 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SMART SM00388 915 978 1.2E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Gene3D G3DSA:3.40.50.150 267 465 1.2E-59 T 12-10-2018 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Pfam PF01739 CheR methyltransferase, SAM binding domain 269 460 9.7E-52 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SMART SM00138 199 464 9.0E-53 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Pfam PF01339 CheB methylesterase 20 176 2.1E-10 T 12-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Gene3D G3DSA:3.40.50.180 12 187 3.9E-13 T 12-10-2018 IPR035909 Methylesterase CheB, C-terminal BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SUPERFAMILY SSF47384 911 975 3.34E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SUPERFAMILY SSF53335 267 463 1.3E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 SMART SM00387 1020 1126 4.8E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 790 907 2.8E-12 T 12-10-2018 IPR000014 PAS domain BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1022 1125 1.1E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 Pfam PF13596 PAS domain 682 776 4.1E-8 T 12-10-2018 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 PRINTS PR00996 Glutamate methyltransferase family signature 302 322 1.3E-21 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 PRINTS PR00996 Glutamate methyltransferase family signature 423 446 1.3E-21 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 PRINTS PR00996 Glutamate methyltransferase family signature 338 354 1.3E-21 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_11300 b4166acf0663334c4c0ffead12ced12a 1126 PRINTS PR00996 Glutamate methyltransferase family signature 404 418 1.3E-21 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_17300 19178ead03c6da021435c69c7565f999 92 Pfam PF17279 Family of unknown function (DUF5344) 2 88 3.5E-25 T 12-10-2018 BEN31_17300 19178ead03c6da021435c69c7565f999 92 ProDom PD063106 YXIC 1 90 2.0E-16 T 12-10-2018 IPR020315 Uncharacterised protein family YxiC BEN31_15565 801593ca96353974a57c5819a9a43278 212 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 12-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BEN31_15565 801593ca96353974a57c5819a9a43278 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 207 31.099 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BEN31_15565 801593ca96353974a57c5819a9a43278 212 Pfam PF02223 Thymidylate kinase 8 198 2.6E-56 T 12-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 BEN31_15565 801593ca96353974a57c5819a9a43278 212 SUPERFAMILY SSF52540 1 209 8.99E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15565 801593ca96353974a57c5819a9a43278 212 Gene3D G3DSA:3.40.50.300 1 211 2.4E-68 T 12-10-2018 BEN31_15565 801593ca96353974a57c5819a9a43278 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 199 1.3E-64 T 12-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 SUPERFAMILY SSF54919 1 148 2.36E-59 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 12-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 Gene3D G3DSA:3.30.70.141 1 148 7.8E-63 T 12-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 SMART SM00562 1 138 6.1E-86 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 Pfam PF00334 Nucleoside diphosphate kinase 3 135 2.7E-57 T 12-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 36.889 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 5.9E-50 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 5.9E-50 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 5.9E-50 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 5.9E-50 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_05915 cdec2f6eb7e2e9f908423b839950e740 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 5.9E-50 T 12-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 2.7E-49 T 12-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 SUPERFAMILY SSF55973 5 111 5.49E-48 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 PIRSF PIRSF000497 1 398 3.1E-180 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 6.9E-71 T 12-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 SUPERFAMILY SSF55973 247 395 2.75E-70 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 SUPERFAMILY SSF55973 125 246 4.71E-52 T 12-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 Gene3D G3DSA:3.30.300.10 7 247 5.0E-182 T 12-10-2018 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 4.4E-189 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 2.6E-44 T 12-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 59.932 T 12-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 Gene3D G3DSA:3.30.300.10 104 389 5.0E-182 T 12-10-2018 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 12-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 BEN31_02595 0e408ec05bf4013097932fe0d79b44d1 400 Gene3D G3DSA:3.30.300.10 13 284 5.0E-182 T 12-10-2018 BEN31_05180 7aa2a3d04a8494702690a3584929bb9f 425 SUPERFAMILY SSF50494 195 409 2.09E-7 T 12-10-2018 IPR009003 Peptidase S1, PA clan BEN31_05180 7aa2a3d04a8494702690a3584929bb9f 425 SMART SM00228 109 185 1.7E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_05180 7aa2a3d04a8494702690a3584929bb9f 425 SUPERFAMILY SSF50156 135 214 1.97E-12 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_05180 7aa2a3d04a8494702690a3584929bb9f 425 Pfam PF05580 SpoIVB peptidase S55 202 410 3.6E-87 T 12-10-2018 IPR008763 Peptidase S55, SpoIVB BEN31_05180 7aa2a3d04a8494702690a3584929bb9f 425 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 3 415 2.5E-175 T 12-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B BEN31_05180 7aa2a3d04a8494702690a3584929bb9f 425 Gene3D G3DSA:2.30.42.10 133 211 7.2E-18 T 12-10-2018 BEN31_05180 7aa2a3d04a8494702690a3584929bb9f 425 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 105 182 1.0E-9 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 Gene3D G3DSA:1.25.10.10 216 373 2.2E-26 T 12-10-2018 IPR011989 Armadillo-like helical BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 Gene3D G3DSA:3.30.1370.70 1 91 5.7E-28 T 12-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 SMART SM00932 4 89 1.6E-25 T 12-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 SMART SM00567 E-Z type HEAT repeats 280 309 0.024 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 SMART SM00567 E-Z type HEAT repeats 249 278 1.6 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 SMART SM00567 E-Z type HEAT repeats 311 340 0.0063 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 SUPERFAMILY SSF110836 1 86 8.76E-22 T 12-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 85 4.0E-19 T 12-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 Pfam PF13769 Virulence factor 109 188 1.4E-30 T 12-10-2018 IPR025989 Virulence factor domain BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 SUPERFAMILY SSF48371 202 373 1.41E-30 T 12-10-2018 IPR016024 Armadillo-type fold BEN31_06310 c5df5f1821fb51743acc7b37e30c7265 378 Pfam PF13646 HEAT repeats 272 341 9.3E-11 T 12-10-2018 BEN31_18145 ee5b26103c5cde9b29dd693299ebdf4d 611 Gene3D G3DSA:3.40.50.12580 415 591 1.4E-67 T 12-10-2018 BEN31_18145 ee5b26103c5cde9b29dd693299ebdf4d 611 SUPERFAMILY SSF53756 342 604 2.41E-20 T 12-10-2018 BEN31_18145 ee5b26103c5cde9b29dd693299ebdf4d 611 Gene3D G3DSA:3.40.50.11820 254 598 1.4E-67 T 12-10-2018 BEN31_18145 ee5b26103c5cde9b29dd693299ebdf4d 611 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 246 604 3.1E-87 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 SMART SM00363 92 156 5.0E-18 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.363 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 Pfam PF01479 S4 domain 93 139 2.1E-20 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 Gene3D G3DSA:1.10.1050.10 6 200 8.3E-76 T 12-10-2018 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 Gene3D G3DSA:3.10.290.10 91 185 8.3E-76 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 12-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 SMART SM01390 3 91 4.0E-46 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 2.0E-84 T 12-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 1.6E-28 T 12-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 BEN31_02975 8eb6362bbdc0992417b0051f426c74b8 200 SUPERFAMILY SSF55174 2 200 1.65E-66 T 12-10-2018 BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-5 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 Gene3D G3DSA:3.40.190.290 85 287 3.8E-67 T 12-10-2018 BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 Gene3D G3DSA:1.10.10.10 1 84 1.6E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 SUPERFAMILY SSF53850 88 290 1.3E-26 T 12-10-2018 BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 9.3E-14 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 Pfam PF03466 LysR substrate binding domain 87 288 3.0E-30 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_09230 20ed617dc9ba5c5116fe18591ba9a5e7 293 SUPERFAMILY SSF46785 1 87 5.64E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06125 1657413cef64c026264c061beb0952c3 318 Pfam PF10720 Protein of unknown function (DUF2515) 11 309 4.4E-127 T 12-10-2018 IPR019658 Protein of unknown function DUF2515 BEN31_00500 4e200f0443586d196f415f7cc2bdf2de 197 Pfam PF02397 Bacterial sugar transferase 2 176 1.1E-61 T 12-10-2018 IPR003362 Bacterial sugar transferase BEN31_00375 9555e94a19210ec2d8b25fe5293b8cad 262 Pfam PF13730 Helix-turn-helix domain 31 83 1.1E-5 T 12-10-2018 BEN31_00375 9555e94a19210ec2d8b25fe5293b8cad 262 Gene3D G3DSA:1.10.10.10 12 124 1.3E-5 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 432 1.9E-159 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 Pfam PF01235 Sodium:alanine symporter family 53 444 6.1E-153 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 Gene3D G3DSA:1.20.1740.10 57 447 3.6E-8 T 12-10-2018 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 PRINTS PR00175 Sodium/alanine symporter signature 344 366 1.4E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 PRINTS PR00175 Sodium/alanine symporter signature 210 229 1.4E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 PRINTS PR00175 Sodium/alanine symporter signature 91 113 1.4E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 PRINTS PR00175 Sodium/alanine symporter signature 301 319 1.4E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 PRINTS PR00175 Sodium/alanine symporter signature 403 423 1.4E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_12035 1b2d3b00c4f703da7e461a8a07cc5ba5 451 PRINTS PR00175 Sodium/alanine symporter signature 182 200 1.4E-57 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_17140 d858b89cadd3fd667d98328a70a70491 275 Pfam PF00535 Glycosyl transferase family 2 4 163 7.3E-24 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_17140 d858b89cadd3fd667d98328a70a70491 275 Gene3D G3DSA:3.90.550.10 1 237 1.0E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17140 d858b89cadd3fd667d98328a70a70491 275 SUPERFAMILY SSF53448 2 208 2.06E-42 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_09760 f683b5c6cdf707269d55ae52466fe958 305 Gene3D G3DSA:2.30.30.40 4 107 2.7E-33 T 12-10-2018 BEN31_09760 f683b5c6cdf707269d55ae52466fe958 305 Gene3D G3DSA:3.90.1720.10 173 296 6.0E-37 T 12-10-2018 BEN31_09760 f683b5c6cdf707269d55ae52466fe958 305 Pfam PF00877 NlpC/P60 family 187 293 2.4E-24 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN31_09760 f683b5c6cdf707269d55ae52466fe958 305 SUPERFAMILY SSF54001 167 296 4.58E-38 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_14300 b81b8c8a5e9c4c8bc863f5684fadef7e 112 Pfam PF14119 Domain of unknown function (DUF4288) 5 89 7.6E-16 T 12-10-2018 IPR025630 Protein of unknown function DUF4288 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.1E-15 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 8.0E-9 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 Gene3D G3DSA:1.20.5.1150 16 56 1.7E-18 T 12-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 Pfam PF01165 Ribosomal protein S21 5 57 2.5E-21 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 2.4E-21 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 12-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04595 14b9659fd5d60c2bb9b0636536514cb6 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.664 T 12-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_09210 eb6c8d861536e2b12e4fee4c5ec41359 141 TIGRFAM TIGR01753 flav_short: flavodoxin 1 133 1.7E-47 T 12-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 BEN31_09210 eb6c8d861536e2b12e4fee4c5ec41359 141 SUPERFAMILY SSF52218 1 133 3.67E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_09210 eb6c8d861536e2b12e4fee4c5ec41359 141 Gene3D G3DSA:3.40.50.360 1 135 2.0E-34 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_09210 eb6c8d861536e2b12e4fee4c5ec41359 141 Pfam PF00258 Flavodoxin 1 124 9.5E-29 T 12-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 BEN31_07360 ee397576f42e95f5d7560ac41fe73508 80 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 80 29.264 T 12-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like BEN31_07360 ee397576f42e95f5d7560ac41fe73508 80 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 8 74 2.1E-26 T 12-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like BEN31_02270 011782b3b7eb32243189118fa546ebe4 380 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 15 368 4.9E-110 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_02270 011782b3b7eb32243189118fa546ebe4 380 Pfam PF01098 Cell cycle protein 21 370 3.5E-112 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_02270 011782b3b7eb32243189118fa546ebe4 380 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 328 352 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_17335 e385687cd2a98e0927dcb2148dae3d87 266 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 3 140 4.0E-44 T 12-10-2018 IPR014243 Transcription factor, RsfA BEN31_05870 f8b44bc008e81561dce51302f5b10e3b 67 Pfam PF10966 Protein of unknown function (DUF2768) 7 64 9.1E-26 T 12-10-2018 IPR020076 Protein of unknown function DUF2768 BEN31_05870 f8b44bc008e81561dce51302f5b10e3b 67 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 67 2.0E-22 T 12-10-2018 IPR020076 Protein of unknown function DUF2768 BEN31_03315 5517df40def8da0031fdc225723c34ff 309 SMART SM00382 158 282 6.7E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_03315 5517df40def8da0031fdc225723c34ff 309 Gene3D G3DSA:3.40.50.300 108 299 5.1E-51 T 12-10-2018 BEN31_03315 5517df40def8da0031fdc225723c34ff 309 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 1.1E-29 T 12-10-2018 IPR009928 Primosomal DnaI, N-terminal BEN31_03315 5517df40def8da0031fdc225723c34ff 309 Pfam PF01695 IstB-like ATP binding protein 127 273 5.0E-13 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 BEN31_03315 5517df40def8da0031fdc225723c34ff 309 SUPERFAMILY SSF52540 135 272 6.3E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12245 5958ec1c0c04084e34f3b8108e8674f1 298 Gene3D G3DSA:3.10.270.10 28 295 1.4E-83 T 12-10-2018 BEN31_12245 5958ec1c0c04084e34f3b8108e8674f1 298 Pfam PF02649 Type I GTP cyclohydrolase folE2 31 290 9.9E-80 T 12-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 BEN31_12245 5958ec1c0c04084e34f3b8108e8674f1 298 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 5 291 9.3E-58 T 12-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 BEN31_12245 5958ec1c0c04084e34f3b8108e8674f1 298 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 31 295 32.499 T 12-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 BEN31_08480 3dac7f70700848426aa55fed96e7590a 569 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 445 1.3E-170 T 12-10-2018 BEN31_08480 3dac7f70700848426aa55fed96e7590a 569 Pfam PF05670 Domain of unknown function (DUF814) 454 538 1.6E-30 T 12-10-2018 IPR008532 Domain of unknown function DUF814 BEN31_08480 3dac7f70700848426aa55fed96e7590a 569 Gene3D G3DSA:2.30.310.10 1 167 2.1E-69 T 12-10-2018 BEN31_08480 3dac7f70700848426aa55fed96e7590a 569 Gene3D G3DSA:1.10.8.50 168 237 3.2E-26 T 12-10-2018 BEN31_08480 3dac7f70700848426aa55fed96e7590a 569 Gene3D G3DSA:3.40.970.40 241 289 6.8E-22 T 12-10-2018 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 533 674 3.0E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Gene3D G3DSA:1.10.1790.10 286 384 1.2E-15 T 12-10-2018 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Pfam PF00874 PRD domain 294 382 5.7E-20 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Pfam PF00874 PRD domain 185 268 5.9E-7 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 579 595 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 SUPERFAMILY SSF55804 529 674 5.62E-34 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 SUPERFAMILY SSF63520 183 272 3.79E-7 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Pfam PF05043 Mga helix-turn-helix domain 78 150 3.7E-5 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Pfam PF08279 HTH domain 1 47 5.7E-7 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Gene3D G3DSA:1.10.10.10 1 55 4.5E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Gene3D G3DSA:3.40.50.2300 395 475 2.0E-9 T 12-10-2018 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 Gene3D G3DSA:3.40.930.10 528 677 7.8E-53 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 SUPERFAMILY SSF63520 289 384 3.4E-21 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_07115 b36b53d9de7546f02418478a2b0330a8 678 SUPERFAMILY SSF52794 397 473 1.26E-8 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 5.5E-35 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 Gene3D G3DSA:1.10.10.10 258 334 2.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 SUPERFAMILY SSF46785 257 331 3.36E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 171.989 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 331 2.0E-35 T 12-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 328 1.6E-150 T 12-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 Gene3D G3DSA:1.10.8.60 183 257 2.5E-29 T 12-10-2018 BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 SUPERFAMILY SSF52540 21 255 2.42E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 SMART SM00382 52 183 5.7E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 235 2.7E-118 T 12-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 BEN31_03910 c6dcb1654dd26c18fd03aeab9880a039 334 Gene3D G3DSA:3.40.50.300 19 182 4.8E-41 T 12-10-2018 BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 Pfam PF03190 Protein of unknown function, DUF255 1 108 6.3E-43 T 12-10-2018 IPR004879 Domain of unknown function DUF255 BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 Gene3D G3DSA:1.50.10.10 154 280 2.0E-5 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 Gene3D G3DSA:1.50.10.10 335 519 4.0E-8 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 Gene3D G3DSA:3.40.30.10 1 114 2.0E-36 T 12-10-2018 BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 SUPERFAMILY SSF48208 131 484 5.44E-82 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 367 460 9.2E-7 T 12-10-2018 BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 SUPERFAMILY SSF52833 1 94 2.63E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_14575 8871b94164b5d4e4dd9636077c32f96d 627 PIRSF PIRSF006402 1 627 6.8E-201 T 12-10-2018 IPR024705 Spermatogenesis-associated protein 20 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 SUPERFAMILY SSF55681 158 497 6.7E-124 T 12-10-2018 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 Pfam PF01336 OB-fold nucleic acid binding domain 65 142 2.1E-15 T 12-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 159 496 7.0E-84 T 12-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 499 46.362 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 2.1E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 2.1E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 2.1E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 2.1E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 2.1E-40 T 12-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 PIRSF PIRSF039101 2 499 3.6E-204 T 12-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 Gene3D G3DSA:2.40.50.140 11 151 4.8E-47 T 12-10-2018 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 SUPERFAMILY SSF50249 10 151 7.5E-46 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 Gene3D G3DSA:3.30.930.10 152 496 2.9E-139 T 12-10-2018 BEN31_15285 5ec4429c2b17f14a18274c14ac6fe150 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 10 498 5.6E-230 T 12-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 BEN31_06450 2d6fca3e09f3635a2aef1703eb656fdf 431 Pfam PF00535 Glycosyl transferase family 2 6 166 8.8E-23 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_06450 2d6fca3e09f3635a2aef1703eb656fdf 431 Gene3D G3DSA:3.90.550.10 4 243 9.9E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_06450 2d6fca3e09f3635a2aef1703eb656fdf 431 SUPERFAMILY SSF53448 4 211 1.31E-36 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_04720 5e06fc6b091b7fd96d5f35f32a5902de 314 Pfam PF02401 LytB protein 4 284 6.3E-81 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BEN31_04720 5e06fc6b091b7fd96d5f35f32a5902de 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 1.6E-93 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BEN31_04720 5e06fc6b091b7fd96d5f35f32a5902de 314 Gene3D G3DSA:3.40.50.11270 12 103 1.2E-95 T 12-10-2018 BEN31_04720 5e06fc6b091b7fd96d5f35f32a5902de 314 Gene3D G3DSA:3.40.1010.20 7 284 1.2E-95 T 12-10-2018 BEN31_04720 5e06fc6b091b7fd96d5f35f32a5902de 314 Gene3D G3DSA:3.40.1010.20 104 197 1.2E-95 T 12-10-2018 BEN31_04720 5e06fc6b091b7fd96d5f35f32a5902de 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 32.596 T 12-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 Gene3D G3DSA:1.10.1790.10 64 167 1.2E-40 T 12-10-2018 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 Gene3D G3DSA:2.30.24.10 1 55 1.1E-23 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 SMART SM01061 1 59 1.9E-28 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 Pfam PF00874 PRD domain 76 163 9.1E-27 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 Pfam PF00874 PRD domain 180 272 3.0E-19 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 SUPERFAMILY SSF63520 57 166 4.58E-34 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 Pfam PF03123 CAT RNA binding domain 2 56 1.5E-23 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 SUPERFAMILY SSF50151 2 54 2.62E-17 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 ProSitePatterns PS00654 PRD domain signature. 98 110 - T 12-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 SUPERFAMILY SSF63520 170 273 1.83E-27 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16595 1a758626ee6ce83552dd3bce5627cce8 277 Gene3D G3DSA:1.10.1790.10 168 277 1.1E-40 T 12-10-2018 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 Gene3D G3DSA:1.20.1270.50 278 378 7.0E-26 T 12-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 SMART SM00872 275 353 7.9E-9 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 Gene3D G3DSA:2.70.98.30 479 766 2.3E-82 T 12-10-2018 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 4 264 1.3E-49 T 12-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 Pfam PF09261 Alpha mannosidase middle domain 276 350 8.2E-8 T 12-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 SUPERFAMILY SSF74650 368 885 9.31E-70 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 SUPERFAMILY SSF88713 3 268 1.39E-54 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 Gene3D G3DSA:3.20.110.10 1 272 1.6E-102 T 12-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 382 882 3.0E-34 T 12-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 BEN31_14425 69819dc6c93b54e700b0148cdbfcc817 887 SUPERFAMILY SSF88688 276 372 8.17E-11 T 12-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 SUPERFAMILY SSF47336 783 862 7.72E-17 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 PRINTS PR00154 AMP-binding signature 406 417 6.9E-5 T 12-10-2018 IPR020459 AMP-binding BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 PRINTS PR00154 AMP-binding signature 418 426 6.9E-5 T 12-10-2018 IPR020459 AMP-binding BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Gene3D G3DSA:1.10.1200.10 779 863 6.9E-18 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 SMART SM00823 Phosphopantetheine attachment site 787 858 5.0E-6 T 12-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Gene3D G3DSA:3.30.300.30 668 775 1.1E-26 T 12-10-2018 BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Pfam PF00501 AMP-binding enzyme 274 673 1.9E-85 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 SUPERFAMILY SSF52777 19 237 4.11E-21 T 12-10-2018 BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 SMART SM01294 788 854 0.0028 T 12-10-2018 BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 SUPERFAMILY SSF56801 232 800 1.7E-132 T 12-10-2018 BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Pfam PF00550 Phosphopantetheine attachment site 788 853 1.2E-15 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Pfam PF00668 Condensation domain 13 253 1.0E-16 T 12-10-2018 IPR001242 Condensation domain BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 295 692 5.5E-113 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Gene3D G3DSA:3.40.50.12780 261 667 5.4E-114 T 12-10-2018 BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 ProSitePatterns PS00455 Putative AMP-binding domain signature. 411 422 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Pfam PF13193 AMP-binding enzyme C-terminal domain 696 758 8.6E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_12470 c27062337cc8a31c59552e1bc0a2f3ba 889 Gene3D G3DSA:3.30.559.30 18 259 2.4E-27 T 12-10-2018 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 SUPERFAMILY SSF52540 1 1180 9.21E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08330 30528fda48a58367aba0cca785c14443 1186 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1171 9.8E-68 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BEN31_08330 30528fda48a58367aba0cca785c14443 1186 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1180 24.85 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 637 1.4E-29 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 Gene3D G3DSA:3.40.50.300 1 244 3.3E-60 T 12-10-2018 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 Gene3D G3DSA:3.40.50.300 965 1186 1.0E-55 T 12-10-2018 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 SUPERFAMILY SSF75553 484 686 1.57E-57 T 12-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 Gene3D G3DSA:3.30.70.1620 578 667 1.1E-67 T 12-10-2018 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 Gene3D G3DSA:1.20.1060.20 495 679 1.1E-67 T 12-10-2018 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1178 0.0 T 12-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 BEN31_08330 30528fda48a58367aba0cca785c14443 1186 PIRSF PIRSF005719 1 1186 0.0 T 12-10-2018 IPR024704 Structural maintenance of chromosomes protein BEN31_08330 30528fda48a58367aba0cca785c14443 1186 SMART SM00968 518 637 1.5E-39 T 12-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 BEN31_12285 6a9748d512631445f472f1b02968811c 396 Gene3D G3DSA:3.90.550.10 1 268 3.2E-58 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_12285 6a9748d512631445f472f1b02968811c 396 Pfam PF00535 Glycosyl transferase family 2 8 129 1.1E-26 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_12285 6a9748d512631445f472f1b02968811c 396 SUPERFAMILY SSF53448 2 277 7.11E-46 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17905 6cfa65cac0393c922473465c8f6f80d1 305 Pfam PF13407 Periplasmic binding protein domain 40 290 2.3E-66 T 12-10-2018 IPR025997 Periplasmic binding protein BEN31_17905 6cfa65cac0393c922473465c8f6f80d1 305 SUPERFAMILY SSF53822 32 301 3.88E-88 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_17905 6cfa65cac0393c922473465c8f6f80d1 305 Gene3D G3DSA:3.40.50.2300 43 290 1.1E-91 T 12-10-2018 BEN31_17905 6cfa65cac0393c922473465c8f6f80d1 305 Gene3D G3DSA:3.40.50.2300 138 271 1.1E-91 T 12-10-2018 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 SUPERFAMILY SSF46565 1 103 1.44E-37 T 12-10-2018 IPR036869 Chaperone J-domain superfamily BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 SUPERFAMILY SSF57938 134 215 4.58E-18 T 12-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 353 1.4E-140 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Pfam PF00226 DnaJ domain 5 66 1.0E-26 T 12-10-2018 IPR001623 DnaJ domain BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 12-10-2018 IPR018253 DnaJ domain, conserved site BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Gene3D G3DSA:1.10.287.110 1 112 2.9E-38 T 12-10-2018 IPR036869 Chaperone J-domain superfamily BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Pfam PF01556 DnaJ C terminal domain 120 337 7.4E-45 T 12-10-2018 IPR002939 Chaperone DnaJ, C-terminal BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 373 41.352 T 12-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 SUPERFAMILY SSF49493 114 260 1.83E-20 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 SMART SM00271 4 61 2.7E-30 T 12-10-2018 IPR001623 DnaJ domain BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Gene3D G3DSA:2.60.260.20 117 253 4.1E-36 T 12-10-2018 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Gene3D G3DSA:2.10.230.10 147 211 4.1E-36 T 12-10-2018 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Gene3D G3DSA:2.60.260.20 257 337 6.9E-31 T 12-10-2018 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 SUPERFAMILY SSF49493 262 348 2.22E-25 T 12-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 PRINTS PR00625 DnaJ domain signature 25 40 5.3E-31 T 12-10-2018 IPR001623 DnaJ domain BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 PRINTS PR00625 DnaJ domain signature 41 61 5.3E-31 T 12-10-2018 IPR001623 DnaJ domain BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 PRINTS PR00625 DnaJ domain signature 61 80 5.3E-31 T 12-10-2018 IPR001623 DnaJ domain BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 PRINTS PR00625 DnaJ domain signature 7 25 5.3E-31 T 12-10-2018 IPR001623 DnaJ domain BEN31_04570 dc63a61c84ec7c15bbb7d5e5d66e6fb6 377 Pfam PF00684 DnaJ central domain 147 211 9.3E-13 T 12-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 BEN31_09725 ee34dc35aeed881e11ff1fa1bc900c24 181 SUPERFAMILY SSF55729 6 162 5.76E-40 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_09725 ee34dc35aeed881e11ff1fa1bc900c24 181 Gene3D G3DSA:3.40.630.30 1 178 1.4E-44 T 12-10-2018 BEN31_09725 ee34dc35aeed881e11ff1fa1bc900c24 181 Pfam PF13302 Acetyltransferase (GNAT) domain 13 153 5.6E-35 T 12-10-2018 IPR000182 GNAT domain BEN31_08670 ff80888db07766737a09f037f1da2b30 309 Pfam PF03419 Sporulation factor SpoIIGA 2 299 7.2E-83 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 BEN31_08670 ff80888db07766737a09f037f1da2b30 309 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 300 7.8E-86 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 BEN31_08670 ff80888db07766737a09f037f1da2b30 309 PIRSF PIRSF018571 1 302 6.8E-90 T 12-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 BEN31_05405 86dca3a8ddde21f8e58c8b1a36e928e6 316 Pfam PF00753 Metallo-beta-lactamase superfamily 19 230 1.2E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_05405 86dca3a8ddde21f8e58c8b1a36e928e6 316 Gene3D G3DSA:3.60.15.10 1 258 7.3E-51 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_05405 86dca3a8ddde21f8e58c8b1a36e928e6 316 SUPERFAMILY SSF56281 2 302 4.46E-44 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_05405 86dca3a8ddde21f8e58c8b1a36e928e6 316 SMART SM00849 18 230 1.6E-19 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_10960 2dbb897d4bd2ada45463189cad3bcbfc 172 Pfam PF11667 Putative zincin peptidase 59 153 1.4E-16 T 12-10-2018 IPR021683 Putative zincin peptidase BEN31_14780 de9327ae30ffef31bc2095c1e40a6124 321 Pfam PF01758 Sodium Bile acid symporter family 42 214 5.4E-18 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 BEN31_14780 de9327ae30ffef31bc2095c1e40a6124 321 Gene3D G3DSA:1.20.1530.20 6 313 2.0E-54 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Gene3D G3DSA:1.10.1790.10 183 283 2.3E-14 T 12-10-2018 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Pfam PF00874 PRD domain 194 279 1.3E-12 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Pfam PF00874 PRD domain 308 395 6.4E-21 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 636 1.3E-27 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 SUPERFAMILY SSF63520 183 280 2.88E-17 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 SUPERFAMILY SSF63520 291 398 5.36E-25 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Pfam PF08279 HTH domain 5 62 5.6E-10 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 408 481 4.4E-5 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Gene3D G3DSA:1.10.10.10 1 65 1.4E-10 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Gene3D G3DSA:1.10.10.10 79 158 2.0E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 SUPERFAMILY SSF52794 406 481 1.78E-5 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Pfam PF05043 Mga helix-turn-helix domain 86 171 4.6E-14 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Gene3D G3DSA:1.10.1790.10 297 397 7.6E-24 T 12-10-2018 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 SUPERFAMILY SSF46785 4 64 1.9E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Gene3D G3DSA:3.40.50.2300 405 491 3.7E-9 T 12-10-2018 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 SUPERFAMILY SSF55804 499 635 2.49E-27 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_16695 c76d5e975330028f46ca09aac747f7d1 652 Gene3D G3DSA:3.40.930.10 498 637 1.8E-23 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_16795 c387c9ed7818bc4d2d11524576aff437 312 Gene3D G3DSA:3.40.50.1980 31 130 5.1E-17 T 12-10-2018 BEN31_16795 c387c9ed7818bc4d2d11524576aff437 312 SUPERFAMILY SSF53807 36 297 7.06E-57 T 12-10-2018 BEN31_16795 c387c9ed7818bc4d2d11524576aff437 312 Gene3D G3DSA:3.40.50.1980 138 308 1.1E-48 T 12-10-2018 BEN31_16795 c387c9ed7818bc4d2d11524576aff437 312 Pfam PF01497 Periplasmic binding protein 54 286 2.7E-39 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_01650 74e46e307b47f6046a4c8edb1f4fa979 198 Gene3D G3DSA:1.10.1760.20 1 191 1.5E-46 T 12-10-2018 BEN31_01650 74e46e307b47f6046a4c8edb1f4fa979 198 Pfam PF02632 BioY family 36 181 1.6E-31 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BEN31_01650 74e46e307b47f6046a4c8edb1f4fa979 198 PIRSF PIRSF016661 1 191 3.3E-43 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 SUPERFAMILY SSF64518 1 303 6.8E-93 T 12-10-2018 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 Gene3D G3DSA:1.20.1330.10 43 186 3.2E-61 T 12-10-2018 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 Pfam PF00700 Bacterial flagellin C-terminal helical region 218 302 4.3E-33 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 Gene3D G3DSA:1.20.58.1830 3 31 3.2E-61 T 12-10-2018 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 Gene3D G3DSA:1.10.8.410 250 303 3.2E-29 T 12-10-2018 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 PRINTS PR00207 Flagellin signature 110 133 5.3E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 PRINTS PR00207 Flagellin signature 35 52 5.3E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 PRINTS PR00207 Flagellin signature 74 93 5.3E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.7E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_09945 cb54d326ea3c5e5a9d17c3ae658e1864 303 Gene3D G3DSA:2.170.280.10 187 200 3.2E-61 T 12-10-2018 BEN31_09310 016d96c625ea03bb7b2f59f2165328b6 294 Pfam PF01545 Cation efflux family 12 204 4.5E-52 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN31_09310 016d96c625ea03bb7b2f59f2165328b6 294 Gene3D G3DSA:3.30.70.1350 205 293 1.7E-29 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BEN31_09310 016d96c625ea03bb7b2f59f2165328b6 294 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 8 288 4.8E-73 T 12-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 BEN31_09310 016d96c625ea03bb7b2f59f2165328b6 294 Pfam PF16916 Dimerisation domain of Zinc Transporter 211 287 5.3E-23 T 12-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain BEN31_09310 016d96c625ea03bb7b2f59f2165328b6 294 SUPERFAMILY SSF160240 210 287 7.85E-21 T 12-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 BEN31_09310 016d96c625ea03bb7b2f59f2165328b6 294 SUPERFAMILY SSF161111 7 206 5.89E-59 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN31_09310 016d96c625ea03bb7b2f59f2165328b6 294 Gene3D G3DSA:1.20.1510.10 7 204 1.1E-63 T 12-10-2018 IPR027469 Cation efflux transmembrane domain superfamily BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 Pfam PF00561 alpha/beta hydrolase fold 27 274 1.6E-24 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 SUPERFAMILY SSF53474 3 286 9.47E-72 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 PRINTS PR00412 Epoxide hydrolase signature 33 51 3.5E-23 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 PRINTS PR00412 Epoxide hydrolase signature 53 68 3.5E-23 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 PRINTS PR00412 Epoxide hydrolase signature 100 113 3.5E-23 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 PRINTS PR00412 Epoxide hydrolase signature 262 284 3.5E-23 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 4.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 4.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 231 245 4.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_14295 a42868e9838296a76e72d0dd3ccd3c19 286 Gene3D G3DSA:3.40.50.1820 4 286 8.0E-83 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_09555 ce74cacc308f4dde14ee0951c6541e78 64 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 59 3.4E-22 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BEN31_09555 ce74cacc308f4dde14ee0951c6541e78 64 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BEN31_09555 ce74cacc308f4dde14ee0951c6541e78 64 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 38 52 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BEN31_09555 ce74cacc308f4dde14ee0951c6541e78 64 Gene3D G3DSA:1.10.8.910 5 64 1.8E-29 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BEN31_18115 3e85edfba716e474f77dd897710d1f3e 461 Pfam PF13751 Transposase DDE domain 324 443 2.0E-25 T 12-10-2018 IPR025668 Transposase DDE domain BEN31_18115 3e85edfba716e474f77dd897710d1f3e 461 Pfam PF05598 Transposase domain (DUF772) 52 128 2.4E-25 T 12-10-2018 IPR008490 Transposase InsH, N-terminal BEN31_14595 a4739a9f99be2307bf85fd5608115f41 462 Pfam PF00324 Amino acid permease 14 424 1.6E-102 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_14595 a4739a9f99be2307bf85fd5608115f41 462 PIRSF PIRSF006060 1 460 2.4E-64 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_14595 a4739a9f99be2307bf85fd5608115f41 462 Gene3D G3DSA:1.20.1740.10 4 458 9.9E-57 T 12-10-2018 BEN31_14595 a4739a9f99be2307bf85fd5608115f41 462 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 Pfam PF11967 Recombination protein O N terminal 1 77 2.3E-27 T 12-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 243 1.7E-87 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 Gene3D G3DSA:1.20.1440.120 88 225 5.1E-21 T 12-10-2018 BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 SUPERFAMILY SSF50249 1 77 1.88E-20 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 Pfam PF02565 Recombination protein O C terminal 82 237 2.9E-47 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 Gene3D G3DSA:3.30.60.100 146 185 5.1E-21 T 12-10-2018 BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 SUPERFAMILY SSF57863 81 231 1.57E-48 T 12-10-2018 IPR037278 ARFGAP/RecO-like zinc finger BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 32.281 T 12-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 BEN31_04665 f68d7d8582abb1b92133bcb767183289 256 Gene3D G3DSA:2.40.50.140 3 77 1.6E-15 T 12-10-2018 BEN31_04195 abaa1e3ee1d3ad30715e14791d59d817 200 SUPERFAMILY SSF53335 5 191 4.87E-31 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_04195 abaa1e3ee1d3ad30715e14791d59d817 200 Gene3D G3DSA:3.40.50.150 9 200 1.3E-33 T 12-10-2018 BEN31_04195 abaa1e3ee1d3ad30715e14791d59d817 200 Pfam PF08241 Methyltransferase domain 49 147 9.5E-18 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 SUPERFAMILY SSF53597 146 357 1.29E-51 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 Gene3D G3DSA:3.40.430.10 138 359 4.6E-66 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 PIRSF PIRSF006769 1 360 1.8E-129 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 Gene3D G3DSA:3.40.140.10 1 136 1.1E-45 T 12-10-2018 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 8.0E-22 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 Pfam PF01872 RibD C-terminal domain 148 337 6.4E-51 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 357 1.9E-121 T 12-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 SUPERFAMILY SSF53927 4 145 9.22E-45 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_12185 94545a73448b693f41b7ce573642a0b2 360 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 359 8.5E-63 T 12-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 BEN31_05470 60f306ca6f8c2d8e331b9c19fa9ade66 420 Gene3D G3DSA:1.25.40.10 1 378 4.1E-120 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05470 60f306ca6f8c2d8e331b9c19fa9ade66 420 Pfam PF13424 Tetratricopeptide repeat 187 252 4.3E-11 T 12-10-2018 BEN31_05470 60f306ca6f8c2d8e331b9c19fa9ade66 420 SUPERFAMILY SSF48452 118 311 2.5E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05470 60f306ca6f8c2d8e331b9c19fa9ade66 420 SMART SM00028 180 213 67.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05470 60f306ca6f8c2d8e331b9c19fa9ade66 420 SMART SM00028 262 295 400.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05470 60f306ca6f8c2d8e331b9c19fa9ade66 420 SMART SM00028 220 253 4.2E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_05470 60f306ca6f8c2d8e331b9c19fa9ade66 420 SMART SM00028 139 172 34.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04025 00cbf2ef45f626620ed3fc9beb9a475c 380 Pfam PF00266 Aminotransferase class-V 4 365 1.4E-85 T 12-10-2018 IPR000192 Aminotransferase class V domain BEN31_04025 00cbf2ef45f626620ed3fc9beb9a475c 380 PIRSF PIRSF005572 1 380 2.3E-128 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BEN31_04025 00cbf2ef45f626620ed3fc9beb9a475c 380 Gene3D G3DSA:3.40.640.10 61 235 1.0E-143 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_04025 00cbf2ef45f626620ed3fc9beb9a475c 380 Gene3D G3DSA:3.90.1150.10 4 371 1.0E-143 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_04025 00cbf2ef45f626620ed3fc9beb9a475c 380 SUPERFAMILY SSF53383 3 377 1.48E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_04025 00cbf2ef45f626620ed3fc9beb9a475c 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN31_04025 00cbf2ef45f626620ed3fc9beb9a475c 380 Gene3D G3DSA:1.10.260.50 15 279 1.0E-143 T 12-10-2018 BEN31_16835 c52ed8c8e6fd66042d092f89a6dcc399 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 174 2.2E-29 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_16835 c52ed8c8e6fd66042d092f89a6dcc399 177 Pfam PF08281 Sigma-70, region 4 120 171 2.7E-16 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_16835 c52ed8c8e6fd66042d092f89a6dcc399 177 Pfam PF04542 Sigma-70 region 2 24 91 1.9E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_16835 c52ed8c8e6fd66042d092f89a6dcc399 177 SUPERFAMILY SSF88659 115 175 2.24E-15 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_16835 c52ed8c8e6fd66042d092f89a6dcc399 177 SUPERFAMILY SSF88946 2 96 2.88E-27 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_16835 c52ed8c8e6fd66042d092f89a6dcc399 177 Gene3D G3DSA:1.10.1740.10 1 113 1.7E-27 T 12-10-2018 BEN31_16835 c52ed8c8e6fd66042d092f89a6dcc399 177 Gene3D G3DSA:1.10.10.10 117 176 1.0E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_15570 77e9d5ebda0d9efb9c74874ca0d55632 469 Gene3D G3DSA:3.40.640.10 45 275 3.7E-109 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_15570 77e9d5ebda0d9efb9c74874ca0d55632 469 Gene3D G3DSA:3.90.1150.150 276 365 3.7E-109 T 12-10-2018 BEN31_15570 77e9d5ebda0d9efb9c74874ca0d55632 469 SUPERFAMILY SSF55904 332 452 2.75E-17 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BEN31_15570 77e9d5ebda0d9efb9c74874ca0d55632 469 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 393 434 1.3E-9 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BEN31_15570 77e9d5ebda0d9efb9c74874ca0d55632 469 Gene3D G3DSA:3.90.105.10 401 454 4.2E-16 T 12-10-2018 BEN31_15570 77e9d5ebda0d9efb9c74874ca0d55632 469 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 3 305 4.6E-87 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BEN31_15570 77e9d5ebda0d9efb9c74874ca0d55632 469 SUPERFAMILY SSF53383 3 354 3.67E-83 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_05100 59484ce3f2515b334c983fca305fc643 397 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 1 390 4.7E-150 T 12-10-2018 IPR014194 Sporulation stage III, protein AE BEN31_05100 59484ce3f2515b334c983fca305fc643 397 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 72 390 1.9E-108 T 12-10-2018 IPR014194 Sporulation stage III, protein AE BEN31_04035 71431f5893dec3688e766164ac4ba604 217 Gene3D G3DSA:1.25.40.10 27 217 8.1E-52 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 SUPERFAMILY SSF81901 4 208 3.92E-37 T 12-10-2018 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 SMART SM00028 170 203 9.6E-7 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 SMART SM00028 136 169 15.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 SMART SM00028 3 33 6.4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 SMART SM00028 34 67 0.06 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 SMART SM00028 68 101 0.12 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 SMART SM00028 102 135 0.0035 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 Pfam PF14559 Tetratricopeptide repeat 11 69 1.2E-6 T 12-10-2018 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 Pfam PF13432 Tetratricopeptide repeat 106 169 7.6E-6 T 12-10-2018 BEN31_04035 71431f5893dec3688e766164ac4ba604 217 Pfam PF00515 Tetratricopeptide repeat 170 203 2.3E-8 T 12-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 BEN31_10035 beccbc7ebcc3fc0a13fbcb24bf151e7c 276 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 5 223 4.9E-52 T 12-10-2018 IPR005181 Sialate O-acetylesterase domain BEN31_10035 beccbc7ebcc3fc0a13fbcb24bf151e7c 276 Gene3D G3DSA:3.40.50.1110 1 247 4.2E-85 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BEN31_10035 beccbc7ebcc3fc0a13fbcb24bf151e7c 276 SUPERFAMILY SSF52266 3 268 4.95E-79 T 12-10-2018 BEN31_06765 2be7976354332058d50c937365f72936 499 SUPERFAMILY SSF53067 248 488 1.57E-64 T 12-10-2018 BEN31_06765 2be7976354332058d50c937365f72936 499 TIGRFAM TIGR01312 XylB: xylulokinase 5 483 8.3E-186 T 12-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 BEN31_06765 2be7976354332058d50c937365f72936 499 PIRSF PIRSF000538 1 495 8.2E-166 T 12-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_06765 2be7976354332058d50c937365f72936 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 246 7.0E-71 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BEN31_06765 2be7976354332058d50c937365f72936 499 Gene3D G3DSA:3.30.420.40 4 247 2.9E-84 T 12-10-2018 BEN31_06765 2be7976354332058d50c937365f72936 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_06765 2be7976354332058d50c937365f72936 499 SUPERFAMILY SSF53067 1 246 1.59E-77 T 12-10-2018 BEN31_06765 2be7976354332058d50c937365f72936 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 441 3.3E-33 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BEN31_06765 2be7976354332058d50c937365f72936 499 Gene3D G3DSA:3.30.420.40 248 491 1.8E-76 T 12-10-2018 BEN31_06765 2be7976354332058d50c937365f72936 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 131 143 - T 12-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 BEN31_00530 630591d3372a1a8a68c0a3a2ce50ec0f 271 Pfam PF00005 ABC transporter 29 186 4.0E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00530 630591d3372a1a8a68c0a3a2ce50ec0f 271 SMART SM00382 37 236 1.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_00530 630591d3372a1a8a68c0a3a2ce50ec0f 271 SUPERFAMILY SSF52540 8 258 6.3E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00530 630591d3372a1a8a68c0a3a2ce50ec0f 271 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_00530 630591d3372a1a8a68c0a3a2ce50ec0f 271 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 27 262 2.5E-96 T 12-10-2018 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 BEN31_00530 630591d3372a1a8a68c0a3a2ce50ec0f 271 Gene3D G3DSA:3.40.50.300 6 268 3.1E-81 T 12-10-2018 BEN31_12180 bbd6a4889a298539a102d65d0f020392 699 Pfam PF01391 Collagen triple helix repeat (20 copies) 472 530 3.6E-8 T 12-10-2018 IPR008160 Collagen triple helix repeat BEN31_12180 bbd6a4889a298539a102d65d0f020392 699 TIGRFAM TIGR03721 exospore_TM: BclB C-terminal domain 529 698 1.3E-60 T 12-10-2018 IPR021210 Exosporium BclB, C-terminal BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 Gene3D G3DSA:3.40.190.10 162 267 3.3E-58 T 12-10-2018 BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 SUPERFAMILY SSF53850 91 291 7.97E-38 T 12-10-2018 BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 Pfam PF03466 LysR substrate binding domain 88 289 3.7E-42 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 Gene3D G3DSA:3.40.190.10 91 283 3.3E-58 T 12-10-2018 BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 Gene3D G3DSA:1.10.10.10 1 90 6.6E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-22 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-8 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_17895 c99ac3841656fa1c80e6f2855a381e43 298 SUPERFAMILY SSF46785 1 85 2.29E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 Pfam PF00248 Aldo/keto reductase family 18 261 4.1E-51 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 Gene3D G3DSA:3.20.20.100 2 275 4.8E-123 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 PRINTS PR00069 Aldo-keto reductase signature 95 113 4.5E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 4.5E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 PRINTS PR00069 Aldo-keto reductase signature 125 142 4.5E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 PRINTS PR00069 Aldo-keto reductase signature 39 63 4.5E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 PRINTS PR00069 Aldo-keto reductase signature 159 188 4.5E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 PIRSF PIRSF000097 114 271 4.8E-54 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 PIRSF PIRSF000097 1 119 2.8E-39 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 SUPERFAMILY SSF51430 7 267 8.25E-97 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_14485 a04e2b78378f3cb48bb899cc00595dd1 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_14620 2264e444cfe3c63e97417e090bcc391a 293 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_14620 2264e444cfe3c63e97417e090bcc391a 293 Gene3D G3DSA:3.40.50.300 2 257 1.3E-49 T 12-10-2018 BEN31_14620 2264e444cfe3c63e97417e090bcc391a 293 SMART SM00382 28 207 1.3E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14620 2264e444cfe3c63e97417e090bcc391a 293 SUPERFAMILY SSF52540 3 222 1.09E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14620 2264e444cfe3c63e97417e090bcc391a 293 Pfam PF00005 ABC transporter 20 158 2.1E-25 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09290 9e65e42e29955475c83a6ce3f3d91fe5 153 Pfam PF14177 YkyB-like protein 13 149 6.8E-69 T 12-10-2018 IPR025552 YkyB-like protein BEN31_08830 959a3448453c49f2075228a14d2d6e11 149 SUPERFAMILY SSF158622 4 126 8.76E-35 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BEN31_08830 959a3448453c49f2075228a14d2d6e11 149 Gene3D G3DSA:1.20.1500.10 3 126 8.5E-31 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BEN31_08830 959a3448453c49f2075228a14d2d6e11 149 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 11 115 7.0E-22 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BEN31_02815 5c199de21a81b3f5f10d056d5aa0a791 183 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 181 3.5E-45 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BEN31_02815 5c199de21a81b3f5f10d056d5aa0a791 183 Pfam PF13563 2'-5' RNA ligase superfamily 30 145 2.7E-17 T 12-10-2018 BEN31_02815 5c199de21a81b3f5f10d056d5aa0a791 183 SUPERFAMILY SSF55144 6 181 1.06E-39 T 12-10-2018 IPR009097 Cyclic phosphodiesterase BEN31_02815 5c199de21a81b3f5f10d056d5aa0a791 183 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 181 20.39 T 12-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 BEN31_02815 5c199de21a81b3f5f10d056d5aa0a791 183 Gene3D G3DSA:3.90.1140.10 1 182 4.7E-41 T 12-10-2018 BEN31_09340 62517896debf7cadcef2571292f3b925 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.9E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09340 62517896debf7cadcef2571292f3b925 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.9E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09340 62517896debf7cadcef2571292f3b925 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.9E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09340 62517896debf7cadcef2571292f3b925 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.9E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09340 62517896debf7cadcef2571292f3b925 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.9E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09340 62517896debf7cadcef2571292f3b925 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.9E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09340 62517896debf7cadcef2571292f3b925 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 258 4.3E-54 T 12-10-2018 BEN31_09340 62517896debf7cadcef2571292f3b925 261 Gene3D G3DSA:3.40.50.720 1 259 2.2E-68 T 12-10-2018 BEN31_09340 62517896debf7cadcef2571292f3b925 261 SUPERFAMILY SSF51735 7 258 3.77E-73 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_01135 10ba05bb32d205688c53ea51d53152b3 350 Pfam PF01032 FecCD transport family 36 345 2.5E-93 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_01135 10ba05bb32d205688c53ea51d53152b3 350 SUPERFAMILY SSF81345 25 345 3.79E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01135 10ba05bb32d205688c53ea51d53152b3 350 Gene3D G3DSA:1.10.3470.10 24 349 1.9E-94 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_05450 751c5ea229fcdb26393dee86bed79fbd 324 Pfam PF13673 Acetyltransferase (GNAT) domain 22 145 1.1E-15 T 12-10-2018 IPR000182 GNAT domain BEN31_05450 751c5ea229fcdb26393dee86bed79fbd 324 Gene3D G3DSA:3.40.630.30 6 145 5.5E-19 T 12-10-2018 BEN31_05450 751c5ea229fcdb26393dee86bed79fbd 324 SUPERFAMILY SSF81301 153 314 6.54E-54 T 12-10-2018 BEN31_05450 751c5ea229fcdb26393dee86bed79fbd 324 Pfam PF04229 GrpB protein 150 309 2.8E-54 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase BEN31_05450 751c5ea229fcdb26393dee86bed79fbd 324 Gene3D G3DSA:3.30.460.10 147 316 1.2E-59 T 12-10-2018 BEN31_05450 751c5ea229fcdb26393dee86bed79fbd 324 SUPERFAMILY SSF55729 15 135 6.52E-19 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_18225 cb2976d99d3e9d3a858d37cf5faef383 398 Gene3D G3DSA:3.40.50.2000 40 217 6.8E-6 T 12-10-2018 BEN31_18225 cb2976d99d3e9d3a858d37cf5faef383 398 Gene3D G3DSA:3.40.50.2000 218 371 5.2E-30 T 12-10-2018 BEN31_18225 cb2976d99d3e9d3a858d37cf5faef383 398 Pfam PF13692 Glycosyl transferases group 1 224 361 3.0E-13 T 12-10-2018 BEN31_18225 cb2976d99d3e9d3a858d37cf5faef383 398 SUPERFAMILY SSF53756 41 373 2.77E-28 T 12-10-2018 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 464 1.8E-170 T 12-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 165 452 8.2E-91 T 12-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 465 3.1E-212 T 12-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 111 1.5E-22 T 12-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 SUPERFAMILY SSF55604 8 83 1.02E-21 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 Gene3D G3DSA:3.30.1360.60 1 79 6.0E-30 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 Pfam PF02378 Phosphotransferase system, EIIC 112 409 2.4E-45 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_12070 a243ca22bbaae786b3876658d94fe9d7 478 Pfam PF00367 phosphotransferase system, EIIB 10 42 1.4E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_14375 670714c83c1fc07a2f8bdb667f323c8e 105 SUPERFAMILY SSF46785 10 96 1.81E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14375 670714c83c1fc07a2f8bdb667f323c8e 105 Gene3D G3DSA:1.10.10.10 1 103 8.3E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14375 670714c83c1fc07a2f8bdb667f323c8e 105 Pfam PF03551 Transcriptional regulator PadR-like family 14 82 5.3E-21 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BEN31_06570 a760dae29f05781b8c51cbb09d2885e4 453 PIRSF PIRSF006603 4 451 6.3E-65 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_06570 a760dae29f05781b8c51cbb09d2885e4 453 Pfam PF01554 MatE 20 180 3.0E-34 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_06570 a760dae29f05781b8c51cbb09d2885e4 453 Pfam PF01554 MatE 247 408 2.1E-36 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_06570 a760dae29f05781b8c51cbb09d2885e4 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 3.3E-101 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 Pfam PF03725 3' exoribonuclease family, domain 2 159 225 1.0E-9 T 12-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 44.477 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 SUPERFAMILY SSF55666 153 235 1.57E-23 T 12-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 12-10-2018 IPR018336 Ribonuclease PH, conserved site BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 Pfam PF01138 3' exoribonuclease family, domain 1 10 138 1.0E-23 T 12-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 1.1E-116 T 12-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 Gene3D G3DSA:3.30.230.70 9 238 7.0E-62 T 12-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 BEN31_03565 4dd842b4f08d0b84342185cdc11f3dfb 242 SUPERFAMILY SSF54211 1 182 1.21E-43 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_03830 8568c53dce8cf71de306fc9554310d82 197 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 14 71 1.1E-21 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BEN31_03830 8568c53dce8cf71de306fc9554310d82 197 Gene3D G3DSA:1.10.287.130 1 71 2.0E-27 T 12-10-2018 BEN31_03830 8568c53dce8cf71de306fc9554310d82 197 SMART SM01317 73 187 2.5E-63 T 12-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal BEN31_03830 8568c53dce8cf71de306fc9554310d82 197 SUPERFAMILY SSF55890 15 190 8.76E-55 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BEN31_03830 8568c53dce8cf71de306fc9554310d82 197 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 74 185 8.2E-38 T 12-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal BEN31_03830 8568c53dce8cf71de306fc9554310d82 197 Gene3D G3DSA:3.30.565.30 72 190 3.7E-36 T 12-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 Gene3D G3DSA:1.10.1650.20 270 322 3.5E-181 T 12-10-2018 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 Gene3D G3DSA:3.20.70.20 136 676 3.5E-181 T 12-10-2018 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 3 690 0.0 T 12-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 SUPERFAMILY SSF51998 151 679 1.13E-164 T 12-10-2018 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 75 147 2.2E-14 T 12-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 79 678 1.9E-170 T 12-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 548 570 - T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 Pfam PF08343 Ribonucleotide reductase N-terminal 3 73 9.8E-24 T 12-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 Pfam PF02867 Ribonucleotide reductase, barrel domain 152 674 5.9E-136 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 SUPERFAMILY SSF48168 4 150 4.05E-43 T 12-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 PRINTS PR01183 Ribonucleotide reductase large chain signature 559 586 1.8E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 PRINTS PR01183 Ribonucleotide reductase large chain signature 471 494 1.8E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 PRINTS PR01183 Ribonucleotide reductase large chain signature 227 246 1.8E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 PRINTS PR01183 Ribonucleotide reductase large chain signature 360 371 1.8E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00110 e4ae9307b965b0a516891c47847c0e7f 690 PRINTS PR01183 Ribonucleotide reductase large chain signature 443 465 1.8E-26 T 12-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_15530 5ab764714287565576f015b37fd1d1ac 98 SUPERFAMILY SSF82771 6 77 1.18E-14 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN31_15530 5ab764714287565576f015b37fd1d1ac 98 Gene3D G3DSA:3.40.1440.10 1 97 4.5E-33 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN31_15530 5ab764714287565576f015b37fd1d1ac 98 SMART SM00465 5 83 6.9E-5 T 12-10-2018 IPR000305 GIY-YIG endonuclease BEN31_15530 5ab764714287565576f015b37fd1d1ac 98 Pfam PF01541 GIY-YIG catalytic domain 6 75 4.8E-18 T 12-10-2018 IPR000305 GIY-YIG endonuclease BEN31_07695 059ffeedd8a0bf65f7f4e0d303b5ec94 122 Gene3D G3DSA:1.10.3730.20 1 110 1.9E-35 T 12-10-2018 BEN31_07695 059ffeedd8a0bf65f7f4e0d303b5ec94 122 Pfam PF00893 Small Multidrug Resistance protein 4 94 2.6E-29 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BEN31_07695 059ffeedd8a0bf65f7f4e0d303b5ec94 122 SUPERFAMILY SSF103481 6 107 4.18E-22 T 12-10-2018 BEN31_18745 8bc2b7cfd23e760c15215d1fe4f5be83 253 Pfam PF01695 IstB-like ATP binding protein 164 237 2.3E-5 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 BEN31_18745 8bc2b7cfd23e760c15215d1fe4f5be83 253 SUPERFAMILY SSF52540 97 228 4.89E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18745 8bc2b7cfd23e760c15215d1fe4f5be83 253 Gene3D G3DSA:3.40.50.300 54 253 5.2E-27 T 12-10-2018 BEN31_07150 c170171fbd7bbc76991d471072ef0962 276 SUPERFAMILY SSF161098 7 276 7.01E-67 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_07150 c170171fbd7bbc76991d471072ef0962 276 Gene3D G3DSA:1.10.3720.10 3 263 3.0E-59 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_07150 c170171fbd7bbc76991d471072ef0962 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 268 2.6E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_01580 cf784f81be19fe6261bd00d015221b65 78 Pfam PF07293 Protein of unknown function (DUF1450) 2 75 1.0E-35 T 12-10-2018 IPR009910 Protein of unknown function DUF1450 BEN31_01580 cf784f81be19fe6261bd00d015221b65 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 77 1.0E-27 T 12-10-2018 BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 SUPERFAMILY SSF54106 28 71 2.22E-11 T 12-10-2018 BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 SUPERFAMILY SSF54106 79 121 1.2E-12 T 12-10-2018 BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 SMART SM00257 79 122 2.8E-16 T 12-10-2018 IPR018392 LysM domain BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 SMART SM00257 28 71 7.6E-17 T 12-10-2018 IPR018392 LysM domain BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 Pfam PF01476 LysM domain 80 121 2.4E-14 T 12-10-2018 IPR018392 LysM domain BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 Pfam PF01476 LysM domain 29 70 1.5E-14 T 12-10-2018 IPR018392 LysM domain BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 SUPERFAMILY SSF50685 203 249 7.32E-8 T 12-10-2018 IPR036908 RlpA-like domain superfamily BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 Pfam PF06725 3D domain 202 263 1.3E-22 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 Gene3D G3DSA:3.10.350.10 25 77 2.9E-18 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_06660 7845272b9c9ec7aba8ea2265d2cb5d2e 263 Gene3D G3DSA:3.10.350.10 78 127 1.8E-19 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_07420 b1d5a88bb239b6d9fee9e123247fe056 72 Hamap MF_00363 UPF0154 protein . 2 72 22.371 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 BEN31_07420 b1d5a88bb239b6d9fee9e123247fe056 72 Pfam PF03672 Uncharacterised protein family (UPF0154) 11 69 2.1E-30 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 BEN31_07420 b1d5a88bb239b6d9fee9e123247fe056 72 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 41 0.003 T 12-10-2018 IPR005359 Protein with unknown function UPF0154 BEN31_17485 9f45afda4d826235fe2c27170970fea7 124 Gene3D G3DSA:3.40.50.2300 1 123 2.6E-43 T 12-10-2018 BEN31_17485 9f45afda4d826235fe2c27170970fea7 124 Pfam PF00072 Response regulator receiver domain 5 115 1.2E-29 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_17485 9f45afda4d826235fe2c27170970fea7 124 SMART SM00448 3 114 2.8E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_17485 9f45afda4d826235fe2c27170970fea7 124 SUPERFAMILY SSF52172 4 119 5.83E-36 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_01340 44d5c02ebb202508afd14a8e6975026b 114 Gene3D G3DSA:3.40.1360.20 3 114 3.7E-42 T 12-10-2018 BEN31_01340 44d5c02ebb202508afd14a8e6975026b 114 SUPERFAMILY SSF110455 4 112 3.79E-33 T 12-10-2018 BEN31_01340 44d5c02ebb202508afd14a8e6975026b 114 SMART SM00493 6 80 7.1E-6 T 12-10-2018 IPR006171 TOPRIM domain BEN31_07720 fc052a8230f60bafa3a30a9bc33eafe6 249 Pfam PF05908 Poly-gamma-glutamate hydrolase 52 237 3.4E-71 T 12-10-2018 IPR008585 Poly-gamma-glutamate hydrolase BEN31_07720 fc052a8230f60bafa3a30a9bc33eafe6 249 Gene3D G3DSA:3.40.630.100 47 248 3.1E-63 T 12-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily BEN31_04410 aa589774e0bfba721493df3af4786eeb 352 Gene3D G3DSA:3.20.20.70 1 352 3.6E-124 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_04410 aa589774e0bfba721493df3af4786eeb 352 SUPERFAMILY SSF51395 1 351 1.32E-109 T 12-10-2018 BEN31_04410 aa589774e0bfba721493df3af4786eeb 352 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 330 3.3E-77 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 PIRSF PIRSF005917 3 292 1.3E-99 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 15 290 6.2E-82 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 SUPERFAMILY SSF53790 13 231 8.24E-80 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 213 7.5E-27 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 12-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 Gene3D G3DSA:3.30.950.10 123 238 2.7E-41 T 12-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 35.555 T 12-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 BEN31_15525 5c2e5412a63f68b48af7cdd690707c14 292 Gene3D G3DSA:3.40.1010.10 1 122 6.1E-44 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BEN31_08635 eb95fd64b2f11345dac105d1358cbe2a 336 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 6 189 8.4E-72 T 12-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 BEN31_08635 eb95fd64b2f11345dac105d1358cbe2a 336 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 244 336 1.5E-46 T 12-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 BEN31_01330 c094c3c1a99301985ec3cac04347c553 127 Gene3D G3DSA:2.40.50.100 2 127 4.0E-53 T 12-10-2018 BEN31_01330 c094c3c1a99301985ec3cac04347c553 127 SUPERFAMILY SSF51230 3 126 8.98E-47 T 12-10-2018 IPR011053 Single hybrid motif BEN31_01330 c094c3c1a99301985ec3cac04347c553 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 40.59 T 12-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BEN31_01330 c094c3c1a99301985ec3cac04347c553 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 12-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 BEN31_01330 c094c3c1a99301985ec3cac04347c553 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 6.2E-61 T 12-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 BEN31_01330 c094c3c1a99301985ec3cac04347c553 127 Pfam PF01597 Glycine cleavage H-protein 7 126 2.2E-51 T 12-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate BEN31_12045 e38e7dc909fe8eb5dd4daa3dfb5d1b98 172 Pfam PF01965 DJ-1/PfpI family 3 168 1.6E-53 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BEN31_12045 e38e7dc909fe8eb5dd4daa3dfb5d1b98 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 5.3E-58 T 12-10-2018 IPR006286 Deglycase PfpI BEN31_12045 e38e7dc909fe8eb5dd4daa3dfb5d1b98 172 Gene3D G3DSA:3.40.50.880 1 171 5.6E-53 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_12045 e38e7dc909fe8eb5dd4daa3dfb5d1b98 172 SUPERFAMILY SSF52317 1 170 3.11E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_09790 932a075c04c16e06fa90d43ed0d668ff 311 Gene3D G3DSA:1.10.3720.10 83 300 6.4E-25 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_09790 932a075c04c16e06fa90d43ed0d668ff 311 SUPERFAMILY SSF161098 88 286 5.36E-23 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_09790 932a075c04c16e06fa90d43ed0d668ff 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 302 6.9E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_04620 a6f9302b7d3b55407f269ba08f315c53 93 Pfam PF07873 YabP family 27 90 9.4E-19 T 12-10-2018 IPR022476 Sporulation protein YabP/YqfC BEN31_04620 a6f9302b7d3b55407f269ba08f315c53 93 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 8 91 4.2E-37 T 12-10-2018 IPR022477 Sporulation protein YqfC BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 29.152 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 9.5E-11 T 12-10-2018 IPR000305 GIY-YIG endonuclease BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Pfam PF14520 Helix-hairpin-helix domain 539 590 4.0E-7 T 12-10-2018 BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 376 523 5.8E-57 T 12-10-2018 IPR001162 UvrC family homology region BEN31_03490 90d9679daa88275547a11d0579adfc40 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 7.5E-226 T 12-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 BEN31_03490 90d9679daa88275547a11d0579adfc40 590 SUPERFAMILY SSF46600 183 235 6.02E-14 T 12-10-2018 IPR036876 UVR domain superfamily BEN31_03490 90d9679daa88275547a11d0579adfc40 590 SUPERFAMILY SSF82771 14 97 1.12E-21 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Gene3D G3DSA:1.10.150.20 527 589 1.7E-20 T 12-10-2018 BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Gene3D G3DSA:3.30.420.340 365 523 2.5E-62 T 12-10-2018 IPR038476 UvrC homology region 2 superfamily BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Pfam PF02151 UvrB/uvrC motif 199 228 5.0E-9 T 12-10-2018 IPR001943 UVR domain GO:0005515 BEN31_03490 90d9679daa88275547a11d0579adfc40 590 SUPERFAMILY SSF47781 502 589 8.26E-21 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_03490 90d9679daa88275547a11d0579adfc40 590 Gene3D G3DSA:3.40.1440.10 1 99 5.7E-38 T 12-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 BEN31_03490 90d9679daa88275547a11d0579adfc40 590 SMART SM00465 15 95 5.0E-25 T 12-10-2018 IPR000305 GIY-YIG endonuclease BEN31_01935 137375c8d7f9ace92d5743b16dd3eda1 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BEN31_01935 137375c8d7f9ace92d5743b16dd3eda1 387 Gene3D G3DSA:3.40.50.1970 1 184 6.3E-57 T 12-10-2018 BEN31_01935 137375c8d7f9ace92d5743b16dd3eda1 387 Gene3D G3DSA:1.20.1090.10 185 386 1.2E-45 T 12-10-2018 BEN31_01935 137375c8d7f9ace92d5743b16dd3eda1 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 369 4.2E-100 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BEN31_01935 137375c8d7f9ace92d5743b16dd3eda1 387 SUPERFAMILY SSF56796 2 384 7.98E-116 T 12-10-2018 BEN31_01935 137375c8d7f9ace92d5743b16dd3eda1 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BEN31_09890 7ff977721dbc82b6bd0b9fd160cef2c6 152 Gene3D G3DSA:3.10.400.10 1 152 4.6E-57 T 12-10-2018 BEN31_09890 7ff977721dbc82b6bd0b9fd160cef2c6 152 SMART SM01022 29 149 3.9E-44 T 12-10-2018 IPR007374 ASCH domain BEN31_09890 7ff977721dbc82b6bd0b9fd160cef2c6 152 SUPERFAMILY SSF88697 1 149 5.22E-51 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_09890 7ff977721dbc82b6bd0b9fd160cef2c6 152 Pfam PF04266 ASCH domain 29 149 9.4E-26 T 12-10-2018 IPR007374 ASCH domain BEN31_09890 7ff977721dbc82b6bd0b9fd160cef2c6 152 PIRSF PIRSF021320 1 152 9.3E-55 T 12-10-2018 IPR009326 Protein of unknown function DUF984 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 Gene3D G3DSA:1.20.1250.20 1 193 2.6E-30 T 12-10-2018 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 Gene3D G3DSA:1.20.1250.20 205 394 1.2E-31 T 12-10-2018 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 Pfam PF07690 Major Facilitator Superfamily 5 257 3.6E-26 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 PRINTS PR01035 Tetracycline resistance protein signature 130 152 5.1E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 PRINTS PR01035 Tetracycline resistance protein signature 73 97 5.1E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 PRINTS PR01035 Tetracycline resistance protein signature 335 358 5.1E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 PRINTS PR01035 Tetracycline resistance protein signature 42 61 5.1E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 PRINTS PR01035 Tetracycline resistance protein signature 100 121 5.1E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01875 88a5829add588010f3f3ce420c7d6938 395 SUPERFAMILY SSF103473 2 390 6.15E-68 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_10255 c64136927f8c4c24d1a4dc81852568ba 132 Gene3D G3DSA:1.10.490.10 1 132 6.6E-54 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BEN31_10255 c64136927f8c4c24d1a4dc81852568ba 132 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 52 76 - T 12-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 BEN31_10255 c64136927f8c4c24d1a4dc81852568ba 132 SUPERFAMILY SSF46458 9 124 8.28E-38 T 12-10-2018 IPR009050 Globin-like superfamily BEN31_10255 c64136927f8c4c24d1a4dc81852568ba 132 Pfam PF01152 Bacterial-like globin 9 121 2.1E-30 T 12-10-2018 IPR001486 Truncated hemoglobin GO:0019825 BEN31_02990 d40016dbfee2c1a95b0ca0e642d5ba30 271 Gene3D G3DSA:3.20.20.140 2 270 2.0E-68 T 12-10-2018 BEN31_02990 d40016dbfee2c1a95b0ca0e642d5ba30 271 Pfam PF13263 PHP-associated 237 265 5.2E-6 T 12-10-2018 BEN31_02990 d40016dbfee2c1a95b0ca0e642d5ba30 271 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 5 264 1.7E-80 T 12-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 BEN31_02990 d40016dbfee2c1a95b0ca0e642d5ba30 271 Pfam PF02811 PHP domain 5 165 4.8E-12 T 12-10-2018 IPR004013 PHP domain GO:0003824 BEN31_02990 d40016dbfee2c1a95b0ca0e642d5ba30 271 SUPERFAMILY SSF89550 4 262 2.88E-35 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BEN31_04740 3b35c5c7d78f35c7f9109b4c5ec1476d 84 ProDom PD060869 YQFT IG BH1387 1 68 2.0E-22 T 12-10-2018 IPR020277 Protein of unknown function DUF2624 BEN31_04740 3b35c5c7d78f35c7f9109b4c5ec1476d 84 Pfam PF11116 Protein of unknown function (DUF2624) 2 83 4.1E-33 T 12-10-2018 IPR020277 Protein of unknown function DUF2624 BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 17 436 2.5E-215 T 12-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 Pfam PF00202 Aminotransferase class-III 32 434 2.6E-125 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 Gene3D G3DSA:3.90.1150.10 16 431 4.4E-159 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 PIRSF PIRSF000521 34 137 5.6E-7 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 PIRSF PIRSF000521 130 437 2.7E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 Gene3D G3DSA:3.40.640.10 66 333 4.4E-159 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 SUPERFAMILY SSF53383 31 436 1.88E-130 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_13730 6d4c94b982f4e76880ab81fbec14ab3c 438 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 250 287 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_11955 2ae46caed9516449647857cc65b88961 373 SUPERFAMILY SSF102114 30 267 3.01E-27 T 12-10-2018 BEN31_11955 2ae46caed9516449647857cc65b88961 373 Gene3D G3DSA:3.20.20.70 22 299 6.5E-23 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_11955 2ae46caed9516449647857cc65b88961 373 Pfam PF04055 Radical SAM superfamily 37 175 1.3E-11 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_11955 2ae46caed9516449647857cc65b88961 373 Pfam PF13353 4Fe-4S single cluster domain 41 135 7.9E-6 T 12-10-2018 BEN31_11955 2ae46caed9516449647857cc65b88961 373 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 9 370 4.8E-196 T 12-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB BEN31_11955 2ae46caed9516449647857cc65b88961 373 Pfam PF08756 YfkB-like domain 221 370 1.7E-77 T 12-10-2018 IPR014866 YfkB-like domain BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 SUPERFAMILY SSF55785 83 194 2.44E-20 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 Gene3D G3DSA:1.10.287.130 198 276 1.2E-15 T 12-10-2018 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 Gene3D G3DSA:3.30.450.20 73 194 1.4E-23 T 12-10-2018 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 423 3.3E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 SMART SM00086 149 191 8.5E-5 T 12-10-2018 IPR001610 PAC motif BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 SMART SM00388 214 277 9.5E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 SMART SM00091 78 146 2.8E-9 T 12-10-2018 IPR000014 PAS domain BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 Gene3D G3DSA:3.30.565.10 277 435 6.9E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 SUPERFAMILY SSF55874 267 426 1.02E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 SMART SM00387 320 426 2.1E-32 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 SUPERFAMILY SSF47384 202 275 1.55E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 1.3E-16 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 77 198 1.3E-17 T 12-10-2018 IPR000014 PAS domain BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 Pfam PF00989 PAS fold 78 188 1.2E-13 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_09065 5d5618f0b697d12bfc67aa2a9426360d 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 275 3.5E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_05560 828803a8117d64496e8217ebaa04c9fa 146 Pfam PF13581 Histidine kinase-like ATPase domain 10 136 5.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_05560 828803a8117d64496e8217ebaa04c9fa 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 35.563 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BEN31_05560 828803a8117d64496e8217ebaa04c9fa 146 SUPERFAMILY SSF55874 28 135 4.19E-24 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_05560 828803a8117d64496e8217ebaa04c9fa 146 Gene3D G3DSA:3.30.565.10 1 143 1.1E-33 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_05560 828803a8117d64496e8217ebaa04c9fa 146 SMART SM00387 35 140 7.8E-9 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_05560 828803a8117d64496e8217ebaa04c9fa 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 2.9E-73 T 12-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 Gene3D G3DSA:3.40.710.10 344 681 2.8E-186 T 12-10-2018 BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 SUPERFAMILY SSF56601 346 703 6.24E-62 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 Gene3D G3DSA:1.10.10.1230 94 219 2.8E-186 T 12-10-2018 BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 Gene3D G3DSA:2.20.70.40 314 335 2.8E-186 T 12-10-2018 BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 329 2.0E-25 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 SUPERFAMILY SSF56519 61 344 3.92E-29 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 Gene3D G3DSA:3.90.1310.30 69 592 2.8E-186 T 12-10-2018 BEN31_09325 d60cfe9893789233b083d1fe8cbbfa00 708 Pfam PF00905 Penicillin binding protein transpeptidase domain 375 684 1.5E-67 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_03135 1b116ce9243c14e62b8d74228ca1e3db 324 PIRSF PIRSF026567 1 321 5.1E-123 T 12-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted BEN31_03135 1b116ce9243c14e62b8d74228ca1e3db 324 SUPERFAMILY SSF53335 33 305 1.44E-42 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_03135 1b116ce9243c14e62b8d74228ca1e3db 324 Gene3D G3DSA:3.40.50.150 80 320 1.7E-50 T 12-10-2018 BEN31_03135 1b116ce9243c14e62b8d74228ca1e3db 324 Gene3D G3DSA:1.10.150.470 1 77 1.7E-14 T 12-10-2018 BEN31_03135 1b116ce9243c14e62b8d74228ca1e3db 324 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 209 233 5.6E-8 T 12-10-2018 BEN31_03135 1b116ce9243c14e62b8d74228ca1e3db 324 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 127 5.6E-8 T 12-10-2018 BEN31_03135 1b116ce9243c14e62b8d74228ca1e3db 324 Pfam PF02384 N-6 DNA Methylase 97 303 1.0E-12 T 12-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 Pfam PF00005 ABC transporter 20 187 2.4E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 SUPERFAMILY SSF52540 312 524 1.92E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 Gene3D G3DSA:3.40.50.300 2 281 3.4E-70 T 12-10-2018 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 Gene3D G3DSA:3.40.50.300 286 547 4.0E-61 T 12-10-2018 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 Gene3D G3DSA:1.10.287.380 548 623 6.0E-11 T 12-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 Pfam PF16326 ABC transporter C-terminal domain 554 619 6.3E-17 T 12-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 Pfam PF00005 ABC transporter 342 469 7.8E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 SUPERFAMILY SSF52540 3 247 2.2E-50 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 Pfam PF12848 ABC transporter 226 300 8.3E-12 T 12-10-2018 IPR032781 ABC-transporter extension domain BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 SMART SM00382 28 231 1.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_12250 be5d21d1b5c0d17dd48fdc7e7f2e7267 629 SMART SM00382 343 510 4.2E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_05890 202dee469b097671ca7ea201ab06d710 189 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 187 1.5E-81 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN31_05890 202dee469b097671ca7ea201ab06d710 189 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN31_05890 202dee469b097671ca7ea201ab06d710 189 Gene3D G3DSA:3.30.1130.10 55 189 2.8E-60 T 12-10-2018 BEN31_05890 202dee469b097671ca7ea201ab06d710 189 Pfam PF01227 GTP cyclohydrolase I 9 186 9.2E-81 T 12-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN31_05890 202dee469b097671ca7ea201ab06d710 189 Gene3D G3DSA:1.10.286.10 1 54 1.4E-24 T 12-10-2018 BEN31_05890 202dee469b097671ca7ea201ab06d710 189 SUPERFAMILY SSF55620 3 187 6.23E-79 T 12-10-2018 BEN31_05890 202dee469b097671ca7ea201ab06d710 189 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 12-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN31_05890 202dee469b097671ca7ea201ab06d710 189 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 42.411 T 12-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 Gene3D G3DSA:2.10.260.10 79 123 2.5E-9 T 12-10-2018 BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 SUPERFAMILY SSF47413 2 64 3.99E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 SUPERFAMILY SSF89447 78 125 6.63E-10 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 83 123 1.3E-11 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 SMART SM00966 83 127 3.9E-7 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 Pfam PF01381 Helix-turn-helix 6 60 9.2E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 SMART SM00530 5 60 1.2E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_16175 2edb775d03ca8dab1f604ee4c396db4d 145 Gene3D G3DSA:1.10.260.40 1 64 1.1E-21 T 12-10-2018 BEN31_06260 09e2e9ca6a28064e6b9ca6572e88ac81 223 Pfam PF13456 Reverse transcriptase-like 79 204 3.6E-14 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BEN31_06260 09e2e9ca6a28064e6b9ca6572e88ac81 223 SUPERFAMILY SSF53098 74 208 2.4E-21 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_06260 09e2e9ca6a28064e6b9ca6572e88ac81 223 Gene3D G3DSA:3.30.420.10 75 214 1.4E-26 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_10440 6ad19740fd8a0298955f63e03f1ffc8b 258 Gene3D G3DSA:3.40.1160.10 1 240 3.6E-71 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_10440 6ad19740fd8a0298955f63e03f1ffc8b 258 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 244 40.434 T 12-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_10440 6ad19740fd8a0298955f63e03f1ffc8b 258 Pfam PF00696 Amino acid kinase family 3 234 4.1E-40 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN31_10440 6ad19740fd8a0298955f63e03f1ffc8b 258 SUPERFAMILY SSF53633 1 253 4.19E-63 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_10440 6ad19740fd8a0298955f63e03f1ffc8b 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 232 1.2E-80 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_10440 6ad19740fd8a0298955f63e03f1ffc8b 258 PIRSF PIRSF000728 1 255 2.0E-85 T 12-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 Gene3D G3DSA:3.20.20.80 2 471 2.0E-161 T 12-10-2018 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 Pfam PF00232 Glycosyl hydrolase family 1 8 468 7.5E-156 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 367 375 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 388 399 4.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 367 375 4.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 4.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 409 426 4.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 433 445 4.4E-15 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_14450 b56d49872e600751a072cef7c5548cd9 473 SUPERFAMILY SSF51445 7 469 4.81E-164 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_04225 4b1c07883fbcadba30088b441f25468f 276 Pfam PF05067 Manganese containing catalase 1 271 3.4E-127 T 12-10-2018 IPR007760 Manganese catalase BEN31_04225 4b1c07883fbcadba30088b441f25468f 276 SUPERFAMILY SSF47240 1 273 1.15E-104 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_04225 4b1c07883fbcadba30088b441f25468f 276 Gene3D G3DSA:1.20.1260.130 2 274 5.4E-90 T 12-10-2018 BEN31_04030 ccb031e87b9c895eea21534f060c7abb 372 SUPERFAMILY SSF52402 7 245 2.87E-58 T 12-10-2018 BEN31_04030 ccb031e87b9c895eea21534f060c7abb 372 Pfam PF03054 tRNA methyl transferase 9 359 2.7E-149 T 12-10-2018 BEN31_04030 ccb031e87b9c895eea21534f060c7abb 372 Gene3D G3DSA:3.40.50.620 1 213 2.1E-97 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_04030 ccb031e87b9c895eea21534f060c7abb 372 Gene3D G3DSA:2.40.30.10 279 372 3.1E-28 T 12-10-2018 BEN31_04030 ccb031e87b9c895eea21534f060c7abb 372 Gene3D G3DSA:2.30.30.280 214 277 1.9E-24 T 12-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BEN31_04030 ccb031e87b9c895eea21534f060c7abb 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 360 40.607 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BEN31_04030 ccb031e87b9c895eea21534f060c7abb 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 359 1.5E-138 T 12-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 BEN31_01995 61f2cd82164da3981abf8d72d6aa5061 246 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 245 43.136 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 BEN31_01995 61f2cd82164da3981abf8d72d6aa5061 246 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 237 3.0E-75 T 12-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 BEN31_13340 2b474ce172631dd7f7d2fccca221b167 291 Gene3D G3DSA:1.10.490.10 1 138 2.4E-32 T 12-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 BEN31_13340 2b474ce172631dd7f7d2fccca221b167 291 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 9 150 3.0E-26 T 12-10-2018 BEN31_13340 2b474ce172631dd7f7d2fccca221b167 291 Pfam PF01740 STAS domain 158 256 8.3E-14 T 12-10-2018 IPR002645 STAS domain BEN31_13340 2b474ce172631dd7f7d2fccca221b167 291 SUPERFAMILY SSF52091 152 256 2.35E-16 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13340 2b474ce172631dd7f7d2fccca221b167 291 Gene3D G3DSA:3.30.750.24 150 270 1.4E-38 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13340 2b474ce172631dd7f7d2fccca221b167 291 Pfam PF08678 Rsbr N terminal 11 138 1.3E-39 T 12-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain BEN31_08795 ca57edf190046f682015dda231553997 414 Pfam PF05636 HIGH Nucleotidyl Transferase 2 387 7.7E-138 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 BEN31_08795 ca57edf190046f682015dda231553997 414 Hamap MF_01539 UPF0348 protein . 2 404 39.873 T 12-10-2018 IPR008513 Uncharacterised protein family UPF0348 BEN31_08795 ca57edf190046f682015dda231553997 414 Gene3D G3DSA:3.40.50.620 1 161 2.3E-38 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_08795 ca57edf190046f682015dda231553997 414 SUPERFAMILY SSF52374 9 238 4.29E-18 T 12-10-2018 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 SUPERFAMILY SSF52540 5 166 1.71E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 Hamap MF_00195 GTPase Der [der]. 3 436 41.02 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 2.6E-178 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.8E-25 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 6.7E-26 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 Gene3D G3DSA:3.40.50.300 170 352 2.9E-56 T 12-10-2018 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 130 2.4E-23 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 324 3.1E-24 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 SUPERFAMILY SSF52540 138 434 7.02E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 Gene3D G3DSA:3.30.300.20 353 436 1.4E-36 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 Gene3D G3DSA:3.40.50.300 1 163 2.5E-47 T 12-10-2018 BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 5.9E-35 T 12-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like BEN31_05860 2bc21379b20bcc13d8c92664ac22aec2 436 PIRSF PIRSF006485 2 436 1.1E-173 T 12-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 BEN31_02540 ecd1277f548bfd0ec7c999df6594bf9b 263 Pfam PF01987 Mitochondrial biogenesis AIM24 17 202 8.4E-19 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 BEN31_02540 ecd1277f548bfd0ec7c999df6594bf9b 263 Gene3D G3DSA:3.60.160.10 5 200 3.3E-13 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily BEN31_02540 ecd1277f548bfd0ec7c999df6594bf9b 263 SUPERFAMILY SSF51219 10 216 3.92E-33 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BEN31_14180 a2dac7270415e9e9824e42adf353f12c 396 Gene3D G3DSA:3.20.20.60 35 232 1.2E-7 T 12-10-2018 BEN31_14180 a2dac7270415e9e9824e42adf353f12c 396 Gene3D G3DSA:3.20.20.60 263 373 4.8E-10 T 12-10-2018 BEN31_14180 a2dac7270415e9e9824e42adf353f12c 396 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 31 369 9.3E-127 T 12-10-2018 IPR039480 C-C bond lyase-like BEN31_14180 a2dac7270415e9e9824e42adf353f12c 396 SUPERFAMILY SSF51621 35 315 2.98E-23 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN31_10240 ddc89b639bbe2f5b592798bf67bada5f 121 Hamap MF_01861 UPF0738 protein . 3 121 29.395 T 12-10-2018 IPR020908 Uncharacterised protein family UPF0738 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 38 57 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 Gene3D G3DSA:3.20.20.70 1 302 1.6E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 299 42.161 T 12-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 SUPERFAMILY SSF51395 2 300 7.0E-89 T 12-10-2018 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 300 1.2E-131 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 Pfam PF01180 Dihydroorotate dehydrogenase 1 284 4.7E-95 T 12-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 PIRSF PIRSF000164 1 301 4.6E-85 T 12-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 BEN31_08530 44aba948af12b60883b7ac5d7a2946c2 310 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 12-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 SUPERFAMILY SSF53850 34 355 7.51E-73 T 12-10-2018 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 Gene3D G3DSA:3.40.190.10 144 353 6.9E-84 T 12-10-2018 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 Gene3D G3DSA:3.40.190.10 51 324 6.9E-84 T 12-10-2018 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 58 79 2.6E-8 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 134 150 2.6E-8 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 262 281 2.6E-8 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 103 116 2.6E-8 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 159 173 2.6E-8 T 12-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 BEN31_13925 879aad04d5a10fe0a11638d66868c91e 361 Pfam PF13416 Bacterial extracellular solute-binding protein 53 321 2.2E-41 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BEN31_09850 c1fd65de7857bc9a3a6362ed0685bab3 326 SUPERFAMILY SSF52518 3 191 1.57E-71 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_09850 c1fd65de7857bc9a3a6362ed0685bab3 326 Pfam PF02780 Transketolase, C-terminal domain 193 316 5.2E-44 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BEN31_09850 c1fd65de7857bc9a3a6362ed0685bab3 326 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 4.9E-52 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_09850 c1fd65de7857bc9a3a6362ed0685bab3 326 SMART SM00861 4 179 4.2E-67 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_09850 c1fd65de7857bc9a3a6362ed0685bab3 326 SUPERFAMILY SSF52922 190 324 2.22E-44 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_09850 c1fd65de7857bc9a3a6362ed0685bab3 326 Gene3D G3DSA:3.40.50.920 192 326 7.4E-50 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_09850 c1fd65de7857bc9a3a6362ed0685bab3 326 Gene3D G3DSA:3.40.50.970 1 191 2.0E-89 T 12-10-2018 BEN31_03465 3df267d7bda35601c4be6450fcc11e0b 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BEN31_03465 3df267d7bda35601c4be6450fcc11e0b 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 258 4.3E-68 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN31_03465 3df267d7bda35601c4be6450fcc11e0b 259 Gene3D G3DSA:3.90.226.10 1 259 7.2E-93 T 12-10-2018 BEN31_03465 3df267d7bda35601c4be6450fcc11e0b 259 SUPERFAMILY SSF52096 5 259 3.21E-85 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 PRINTS PR01607 Apyrase family signature 164 181 8.7E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 PRINTS PR01607 Apyrase family signature 3 21 8.7E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 PRINTS PR01607 Apyrase family signature 211 231 8.7E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 PRINTS PR01607 Apyrase family signature 183 206 8.7E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 PRINTS PR01607 Apyrase family signature 325 348 8.7E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 PRINTS PR01607 Apyrase family signature 407 426 8.7E-16 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 Pfam PF02872 5'-nucleotidase, C-terminal domain 284 421 1.4E-16 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 PIRSF PIRSF036361 1 457 1.1E-176 T 12-10-2018 IPR011240 Phosphoesterase-related protein YunD BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 Pfam PF00149 Calcineurin-like phosphoesterase 6 200 4.2E-7 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 SUPERFAMILY SSF56300 4 273 8.1E-65 T 12-10-2018 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 Gene3D G3DSA:3.60.21.10 1 274 7.2E-56 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 Gene3D G3DSA:3.90.780.10 276 454 6.7E-18 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_01480 a119d6c2b0c77a37de0ae4293114f247 457 SUPERFAMILY SSF55816 279 455 8.37E-31 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_16840 cfe0e7b9dee16927bef088e81e21d5a1 103 Pfam PF17280 Family of unknown function (DUF5345) 10 85 8.2E-23 T 12-10-2018 IPR035238 Protein of unknown function DUF5345 BEN31_16840 cfe0e7b9dee16927bef088e81e21d5a1 103 ProDom PD070249 YXLC MEMBRANE TRANSMEMBRANE 10 76 0.004 T 12-10-2018 IPR035238 Protein of unknown function DUF5345 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 Gene3D G3DSA:3.30.450.20 186 296 4.5E-6 T 12-10-2018 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 Gene3D G3DSA:1.10.10.60 710 764 2.2E-14 T 12-10-2018 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 SMART SM00342 677 760 5.2E-29 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 SUPERFAMILY SSF46689 664 710 2.24E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 SUPERFAMILY SSF46689 713 762 1.75E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 Gene3D G3DSA:1.10.10.60 658 709 1.8E-16 T 12-10-2018 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 Pfam PF02743 Cache domain 40 281 1.2E-12 T 12-10-2018 IPR033479 Double Cache domain 1 BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 SUPERFAMILY SSF103190 201 257 4.71E-5 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_02720 7f059e650b40be3202611f09ad4bfe3f 766 Pfam PF12833 Helix-turn-helix domain 683 761 4.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 169 184 1.5E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 123 143 1.5E-5 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 SUPERFAMILY SSF52540 9 205 4.36E-49 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 Gene3D G3DSA:1.10.1580.10 180 272 3.6E-30 T 12-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 9.1E-116 T 12-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 Gene3D G3DSA:3.40.50.300 12 179 1.5E-50 T 12-10-2018 BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 PIRSF PIRSF006230 1 282 1.4E-104 T 12-10-2018 IPR016478 GTPase, MTG1 BEN31_08280 36c8ed2c4b2d55eef2dc3d00feadf730 282 Pfam PF01926 50S ribosome-binding GTPase 123 213 2.8E-17 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Pfam PF07085 DRTGG domain 76 178 1.2E-28 T 12-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 SUPERFAMILY SSF54637 339 433 4.32E-15 T 12-10-2018 IPR029069 HotDog domain superfamily BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Gene3D G3DSA:1.10.10.10 5 69 9.8E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 58 9.9E-5 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Gene3D G3DSA:3.40.1390.20 70 178 1.4E-26 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 SMART SM00116 259 307 6.2E-8 T 12-10-2018 IPR000644 CBS domain BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 SMART SM00116 200 248 9.8 T 12-10-2018 IPR000644 CBS domain BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 SUPERFAMILY SSF54631 182 307 3.41E-30 T 12-10-2018 BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Gene3D G3DSA:3.10.580.10 186 314 3.4E-24 T 12-10-2018 BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 SUPERFAMILY SSF75138 72 185 1.15E-29 T 12-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Pfam PF00571 CBS domain 253 307 2.8E-9 T 12-10-2018 IPR000644 CBS domain BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Pfam PF00571 CBS domain 191 244 5.4E-6 T 12-10-2018 IPR000644 CBS domain BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Gene3D G3DSA:3.10.129.10 325 439 3.5E-7 T 12-10-2018 BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 SUPERFAMILY SSF46785 5 54 2.92E-6 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03170 80f257fa227ef0096bfb53d9a15de9d0 440 Pfam PF03061 Thioesterase superfamily 354 425 8.9E-7 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 Pfam PF03129 Anticodon binding domain 477 564 1.2E-18 T 12-10-2018 IPR004154 Anticodon-binding BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 SUPERFAMILY SSF55681 9 475 6.8E-101 T 12-10-2018 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 Gene3D G3DSA:3.40.50.800 4 551 2.4E-251 T 12-10-2018 IPR036621 Anticodon-binding domain superfamily BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 SUPERFAMILY SSF55826 218 386 9.68E-34 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 563 6.8E-245 T 12-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 SUPERFAMILY SSF52954 461 564 1.81E-27 T 12-10-2018 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 Pfam PF04073 Aminoacyl-tRNA editing domain 258 373 1.3E-28 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 457 4.8E-56 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 565 40.988 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 4.1E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 4.1E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 4.1E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 4.1E-19 T 12-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 Gene3D G3DSA:3.30.930.10 11 463 2.4E-251 T 12-10-2018 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 Gene3D G3DSA:3.90.960.10 240 387 2.4E-251 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN31_08015 b3a85a7c96b177f61db98eb5c16b2190 565 PIRSF PIRSF001535 1 565 2.5E-258 T 12-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 BEN31_03060 01d049c54a83c92d3965e050046d5e55 114 SUPERFAMILY SSF46785 12 107 1.99E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03060 01d049c54a83c92d3965e050046d5e55 114 Gene3D G3DSA:1.10.10.10 1 112 4.0E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03060 01d049c54a83c92d3965e050046d5e55 114 Pfam PF03551 Transcriptional regulator PadR-like family 16 89 2.1E-25 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 SUPERFAMILY SSF48452 100 216 2.66E-7 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 SUPERFAMILY SSF48452 184 354 7.59E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 Pfam PF13424 Tetratricopeptide repeat 219 293 3.2E-10 T 12-10-2018 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 Gene3D G3DSA:1.25.40.10 1 378 3.6E-117 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 SMART SM00028 180 213 110.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 SMART SM00028 262 295 22.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 SMART SM00028 99 132 200.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 SMART SM00028 220 253 7.3E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09685 13473017e281d84fc481274ebd1f1cd7 378 SMART SM00028 139 172 360.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 Gene3D G3DSA:3.40.50.12780 1 395 4.4E-126 T 12-10-2018 BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 489 2.1E-6 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 Pfam PF00501 AMP-binding enzyme 11 401 5.0E-85 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 2 499 3.3E-212 T 12-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 SUPERFAMILY SSF56801 5 498 5.49E-119 T 12-10-2018 BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 28 425 4.1E-100 T 12-10-2018 IPR010071 Amino acid adenylation domain BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 Gene3D G3DSA:3.30.300.30 396 500 7.0E-29 T 12-10-2018 BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 PRINTS PR00154 AMP-binding signature 141 152 7.1E-5 T 12-10-2018 IPR020459 AMP-binding BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 PRINTS PR00154 AMP-binding signature 153 161 7.1E-5 T 12-10-2018 IPR020459 AMP-binding BEN31_03600 462d2a67858bebeead1707e9f01d57ac 501 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 501 231.846 T 12-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 184 209 - T 12-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 Gene3D G3DSA:3.40.50.720 5 189 2.0E-67 T 12-10-2018 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 PIRSF PIRSF000105 2 287 1.6E-89 T 12-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 SUPERFAMILY SSF48179 186 285 1.36E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 Gene3D G3DSA:1.10.1040.10 190 287 1.4E-33 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 6.0E-34 T 12-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 184 4.3E-63 T 12-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 BEN31_17450 075ba53ca4fb7796292f4d855587a863 287 SUPERFAMILY SSF51735 3 186 6.22E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_06305 cfc3fbe9fa9c77c844ee34c2ce63c2e1 203 SMART SM00471 21 136 1.6E-5 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_06305 cfc3fbe9fa9c77c844ee34c2ce63c2e1 203 Gene3D G3DSA:1.10.472.50 1 99 2.1E-28 T 12-10-2018 BEN31_06305 cfc3fbe9fa9c77c844ee34c2ce63c2e1 203 Gene3D G3DSA:1.20.58.1910 100 203 4.1E-37 T 12-10-2018 BEN31_06305 cfc3fbe9fa9c77c844ee34c2ce63c2e1 203 SUPERFAMILY SSF109604 2 198 2.86E-56 T 12-10-2018 BEN31_06305 cfc3fbe9fa9c77c844ee34c2ce63c2e1 203 Pfam PF01966 HD domain 28 126 4.5E-6 T 12-10-2018 IPR006674 HD domain BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 Pfam PF13377 Periplasmic binding protein-like domain 167 329 1.8E-36 T 12-10-2018 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 SUPERFAMILY SSF47413 1 59 1.97E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 Gene3D G3DSA:1.10.260.40 3 59 5.9E-22 T 12-10-2018 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 SMART SM00354 1 71 6.4E-30 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 6.4E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.9E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.9E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 Gene3D G3DSA:3.40.50.2300 159 288 2.5E-65 T 12-10-2018 BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 SUPERFAMILY SSF53822 60 329 1.21E-67 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_14105 c14f8a727f640f655f56e0394ffe8826 329 Gene3D G3DSA:3.40.50.2300 61 305 2.5E-65 T 12-10-2018 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 Gene3D G3DSA:1.10.10.60 231 286 1.3E-17 T 12-10-2018 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 SMART SM00342 197 280 1.5E-26 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 Gene3D G3DSA:1.10.10.60 178 230 2.8E-11 T 12-10-2018 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 SUPERFAMILY SSF46689 234 281 4.3E-10 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 SUPERFAMILY SSF51215 3 171 6.54E-18 T 12-10-2018 IPR037923 Transcription regulator HTH-like BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 Pfam PF02311 AraC-like ligand binding domain 37 92 7.4E-7 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 SUPERFAMILY SSF46689 185 231 1.52E-6 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_10585 0b04878c3f5f65d1154984e6e638e24d 288 Pfam PF12833 Helix-turn-helix domain 203 280 2.1E-19 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 SUPERFAMILY SSF56327 173 439 2.2E-97 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 Gene3D G3DSA:3.90.110.10 171 442 4.9E-104 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 SUPERFAMILY SSF51735 4 168 2.45E-58 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 Gene3D G3DSA:3.40.50.720 1 170 7.2E-74 T 12-10-2018 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 1.5E-49 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.4E-54 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.4E-54 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.4E-54 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.4E-54 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.4E-54 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.4E-54 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.4E-54 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_16885 66d385c6cb5ba4a91bebc338c665f0a3 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.8E-76 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_17675 9fa2f08751e720bb05ea260176706cbd 224 SUPERFAMILY SSF53300 17 217 2.37E-25 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_17675 9fa2f08751e720bb05ea260176706cbd 224 SMART SM00327 29 219 4.5E-16 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_17675 9fa2f08751e720bb05ea260176706cbd 224 Gene3D G3DSA:3.40.50.410 14 141 4.3E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_17675 9fa2f08751e720bb05ea260176706cbd 224 Gene3D G3DSA:3.40.50.410 142 224 2.0E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_17675 9fa2f08751e720bb05ea260176706cbd 224 Pfam PF00092 von Willebrand factor type A domain 32 214 1.5E-14 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_05380 7963a6376f6db6f290f9149b149fbc71 254 SUPERFAMILY SSF53474 5 236 2.46E-27 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_05380 7963a6376f6db6f290f9149b149fbc71 254 Pfam PF00561 alpha/beta hydrolase fold 30 131 5.1E-13 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_05380 7963a6376f6db6f290f9149b149fbc71 254 Gene3D G3DSA:3.40.50.1820 7 240 6.4E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_03325 c710b3678b48bd7f11d1b1e8611d2c7b 289 PIRSF PIRSF012563 1 280 5.8E-88 T 12-10-2018 IPR014199 Sporulation protein YtxC BEN31_03325 c710b3678b48bd7f11d1b1e8611d2c7b 289 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 3 263 2.7E-66 T 12-10-2018 IPR014199 Sporulation protein YtxC BEN31_03325 c710b3678b48bd7f11d1b1e8611d2c7b 289 Pfam PF08812 YtxC-like family 52 262 3.8E-54 T 12-10-2018 IPR014199 Sporulation protein YtxC BEN31_14955 e6a5804fffd72c586bde6dfbda548e97 60 SUPERFAMILY SSF55129 3 59 8.37E-21 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BEN31_14955 e6a5804fffd72c586bde6dfbda548e97 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 3.1E-20 T 12-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain BEN31_14955 e6a5804fffd72c586bde6dfbda548e97 60 Gene3D G3DSA:3.30.1390.20 1 59 1.8E-27 T 12-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily BEN31_14955 e6a5804fffd72c586bde6dfbda548e97 60 PIRSF PIRSF002211 1 60 7.4E-29 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14955 e6a5804fffd72c586bde6dfbda548e97 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 12-10-2018 IPR018038 Ribosomal protein L30, conserved site BEN31_14955 e6a5804fffd72c586bde6dfbda548e97 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 8.2E-26 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14955 e6a5804fffd72c586bde6dfbda548e97 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 19.773 T 12-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 SUPERFAMILY SSF55785 1 101 4.01E-10 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 153 166 - T 12-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 Pfam PF08448 PAS fold 2 109 6.1E-7 T 12-10-2018 IPR013656 PAS fold-4 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 Gene3D G3DSA:3.40.50.300 115 299 1.1E-59 T 12-10-2018 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 Gene3D G3DSA:1.10.8.60 300 379 2.0E-22 T 12-10-2018 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 Pfam PF00158 Sigma-54 interaction domain 129 294 5.2E-62 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 Gene3D G3DSA:3.30.450.20 7 114 3.0E-10 T 12-10-2018 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 341 350 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 Pfam PF02954 Bacterial regulatory protein, Fis family 416 456 5.5E-13 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 Gene3D G3DSA:1.10.10.60 400 460 9.5E-16 T 12-10-2018 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 SUPERFAMILY SSF52540 128 371 2.0E-64 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 110 2.4E-6 T 12-10-2018 IPR000014 PAS domain BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 439 459 6.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 422 439 6.6E-7 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 214 229 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 SUPERFAMILY SSF46689 341 458 1.75E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_00560 bdd5fdbed0ed454ecc3ff472441acd23 461 SMART SM00382 149 292 4.1E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_09935 b7ec17dcc8c6d211770051596886241a 274 SUPERFAMILY SSF58104 109 272 7.59E-37 T 12-10-2018 BEN31_09935 b7ec17dcc8c6d211770051596886241a 274 SMART SM00283 109 272 0.0024 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_09935 b7ec17dcc8c6d211770051596886241a 274 Gene3D G3DSA:1.10.287.950 102 274 1.2E-35 T 12-10-2018 BEN31_09935 b7ec17dcc8c6d211770051596886241a 274 SUPERFAMILY SSF103190 22 108 1.61E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_09935 b7ec17dcc8c6d211770051596886241a 274 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 145 268 4.5E-27 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_18660 0b598248efa478955c708f07c8dcb4f9 193 SMART SM00947 27 183 5.7E-37 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN31_18660 0b598248efa478955c708f07c8dcb4f9 193 Gene3D G3DSA:3.40.1050.10 1 184 1.8E-45 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BEN31_18660 0b598248efa478955c708f07c8dcb4f9 193 SUPERFAMILY SSF53056 3 182 6.41E-41 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BEN31_18660 0b598248efa478955c708f07c8dcb4f9 193 Pfam PF00484 Carbonic anhydrase 35 178 9.1E-18 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN31_00545 b398725f233e28b4fd9b7db1cb0c1d01 71 SUPERFAMILY SSF158388 3 69 1.96E-34 T 12-10-2018 IPR037247 YvfG domain superfamily BEN31_00545 b398725f233e28b4fd9b7db1cb0c1d01 71 Pfam PF09628 YvfG protein 3 69 1.2E-38 T 12-10-2018 IPR018590 Uncharacterised domain YvfG BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 36 291 1.4E-112 T 12-10-2018 IPR023705 Nucleoid occlusion protein BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 SMART SM00470 38 129 1.2E-36 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 215 8.7E-64 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 SUPERFAMILY SSF109709 123 228 1.28E-32 T 12-10-2018 BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 Gene3D G3DSA:1.10.10.2830 116 229 1.3E-35 T 12-10-2018 BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 SUPERFAMILY SSF110849 32 132 2.56E-29 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 Pfam PF02195 ParB-like nuclease domain 39 128 2.7E-28 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 291 38.689 T 12-10-2018 IPR023705 Nucleoid occlusion protein BEN31_15810 63f138f9db7a88149a5b883191936ea6 291 Gene3D G3DSA:3.90.1530.30 51 115 1.4E-25 T 12-10-2018 BEN31_16990 b5b0ef34069721047e29691336407c13 513 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 148 173 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site BEN31_16990 b5b0ef34069721047e29691336407c13 513 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 1.7E-91 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BEN31_16990 b5b0ef34069721047e29691336407c13 513 Gene3D G3DSA:1.20.1730.10 4 505 6.1E-65 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily BEN31_16990 b5b0ef34069721047e29691336407c13 513 Pfam PF00474 Sodium:solute symporter family 33 434 1.5E-122 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BEN31_16990 b5b0ef34069721047e29691336407c13 513 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site BEN31_12560 3cb1093a34a005559f91b8c4680e9525 104 SUPERFAMILY SSF48295 3 94 2.88E-32 T 12-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 BEN31_12560 3cb1093a34a005559f91b8c4680e9525 104 PIRSF PIRSF012508 1 100 4.2E-48 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD BEN31_12560 3cb1093a34a005559f91b8c4680e9525 104 Pfam PF01371 Trp repressor protein 10 93 1.7E-34 T 12-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 BEN31_12560 3cb1093a34a005559f91b8c4680e9525 104 Gene3D G3DSA:1.10.1270.10 2 104 3.9E-39 T 12-10-2018 IPR038116 TrpR-like superfamily BEN31_12560 3cb1093a34a005559f91b8c4680e9525 104 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 6.0E-50 T 12-10-2018 IPR013368 TrpR homologue YerC/YecD BEN31_09150 f11ed074c4e6f346efd9e61899562eb0 174 Gene3D G3DSA:3.40.50.300 6 171 8.7E-42 T 12-10-2018 BEN31_09150 f11ed074c4e6f346efd9e61899562eb0 174 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 8 134 1.5E-25 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BEN31_09150 f11ed074c4e6f346efd9e61899562eb0 174 SUPERFAMILY SSF52540 8 117 1.04E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09150 f11ed074c4e6f346efd9e61899562eb0 174 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 8 128 6.4E-24 T 12-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 BEN31_04400 fef242fbced73b3e35057bad43ef5bc9 191 Gene3D G3DSA:1.10.357.10 67 191 6.9E-22 T 12-10-2018 BEN31_04400 fef242fbced73b3e35057bad43ef5bc9 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_04400 fef242fbced73b3e35057bad43ef5bc9 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.9E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_04400 fef242fbced73b3e35057bad43ef5bc9 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 2.9E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_04400 fef242fbced73b3e35057bad43ef5bc9 191 SUPERFAMILY SSF48498 82 190 3.81E-18 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_04400 fef242fbced73b3e35057bad43ef5bc9 191 Gene3D G3DSA:1.10.10.60 1 65 4.7E-26 T 12-10-2018 BEN31_04400 fef242fbced73b3e35057bad43ef5bc9 191 SUPERFAMILY SSF46689 2 74 7.18E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_02455 f413bf1384895c8d66905008abc3a678 374 Gene3D G3DSA:3.30.390.10 9 360 8.4E-137 T 12-10-2018 IPR029017 Enolase-like, N-terminal BEN31_02455 f413bf1384895c8d66905008abc3a678 374 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 126 2.1E-17 T 12-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain BEN31_02455 f413bf1384895c8d66905008abc3a678 374 Pfam PF13378 Enolase C-terminal domain-like 146 355 2.8E-44 T 12-10-2018 IPR029065 Enolase C-terminal domain-like BEN31_02455 f413bf1384895c8d66905008abc3a678 374 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 10 333 3.5E-142 T 12-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 BEN31_02455 f413bf1384895c8d66905008abc3a678 374 Gene3D G3DSA:3.20.20.120 119 347 8.4E-137 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN31_02455 f413bf1384895c8d66905008abc3a678 374 SUPERFAMILY SSF54826 3 127 1.22E-34 T 12-10-2018 BEN31_02455 f413bf1384895c8d66905008abc3a678 374 SUPERFAMILY SSF51604 125 360 2.49E-66 T 12-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily BEN31_02455 f413bf1384895c8d66905008abc3a678 374 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 2 360 45.692 T 12-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 BEN31_02455 f413bf1384895c8d66905008abc3a678 374 SMART SM00922 143 235 2.5E-21 T 12-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal BEN31_00390 f1561bdb5d8ee9a06ce814bb1edce382 543 Gene3D G3DSA:3.40.190.10 71 286 2.5E-144 T 12-10-2018 BEN31_00390 f1561bdb5d8ee9a06ce814bb1edce382 543 PIRSF PIRSF002741 8 543 4.2E-103 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BEN31_00390 f1561bdb5d8ee9a06ce814bb1edce382 543 SUPERFAMILY SSF53850 46 541 2.22E-121 T 12-10-2018 BEN31_00390 f1561bdb5d8ee9a06ce814bb1edce382 543 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 45 539 1.9E-181 T 12-10-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 BEN31_00390 f1561bdb5d8ee9a06ce814bb1edce382 543 Gene3D G3DSA:3.10.105.10 287 509 2.5E-144 T 12-10-2018 BEN31_00390 f1561bdb5d8ee9a06ce814bb1edce382 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 88 454 2.4E-89 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BEN31_11715 96e5cfcb73930f27ddf36abd2f423f44 140 Pfam PF14184 Regulatory protein YrvL 7 130 1.0E-34 T 12-10-2018 IPR025912 Regulatory protein YrvL BEN31_11715 96e5cfcb73930f27ddf36abd2f423f44 140 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 13 118 2.0E-15 T 12-10-2018 BEN31_10640 53ba6eac8c435da5b684b330d460f6b3 53 Pfam PF09388 Spo0E like sporulation regulatory protein 2 40 3.8E-14 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 BEN31_10640 53ba6eac8c435da5b684b330d460f6b3 53 SUPERFAMILY SSF140500 2 49 2.09E-14 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BEN31_10640 53ba6eac8c435da5b684b330d460f6b3 53 Gene3D G3DSA:1.20.58.990 1 52 3.8E-14 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BEN31_08865 6126817a71439e59e57b48c1549fce3e 292 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 3 277 1.4E-122 T 12-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG BEN31_08865 6126817a71439e59e57b48c1549fce3e 292 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 26 275 2.5E-62 T 12-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 211 6.8E-28 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 PIRSF PIRSF002939 3 218 3.8E-111 T 12-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 Pfam PF08281 Sigma-70, region 4 164 207 1.6E-10 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 62 75 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 179 206 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 SUPERFAMILY SSF88659 125 212 2.22E-11 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 Pfam PF04542 Sigma-70 region 2 38 107 2.0E-14 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 16 212 9.3E-112 T 12-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_15130 ea1e1313638adcffacf05ebf6b099f82 218 SUPERFAMILY SSF88946 19 107 7.2E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_04490 47f72267a7c778ed797c356f48be7eea 247 Gene3D G3DSA:2.20.25.110 140 201 3.7E-83 T 12-10-2018 BEN31_04490 47f72267a7c778ed797c356f48be7eea 247 SUPERFAMILY SSF53335 3 243 1.96E-53 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_04490 47f72267a7c778ed797c356f48be7eea 247 Pfam PF13649 Methyltransferase domain 36 132 3.7E-21 T 12-10-2018 BEN31_04490 47f72267a7c778ed797c356f48be7eea 247 Gene3D G3DSA:3.40.50.150 6 239 3.7E-83 T 12-10-2018 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 142 8.0E-61 T 12-10-2018 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 Gene3D G3DSA:3.40.50.9100 2 144 2.9E-66 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 Pfam PF01220 Dehydroquinase class II 4 139 1.8E-62 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 141 1.1E-67 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 SUPERFAMILY SSF52304 4 141 1.44E-59 T 12-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 PIRSF PIRSF001399 1 145 2.2E-63 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 12-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN31_05060 834d3de9d5c14cf3c78eed6e24f8b82d 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 67.59 T 12-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 513 55.535 T 12-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 SUPERFAMILY SSF54810 393 513 1.23E-51 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 195 1.5E-85 T 12-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 513 9.8E-160 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 SUPERFAMILY SSF52317 7 228 1.02E-60 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00097 Anthranilate synthase component II signature 80 91 4.3E-6 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.3E-6 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00097 Anthranilate synthase component II signature 53 62 4.3E-6 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 Gene3D G3DSA:3.40.50.880 2 196 2.0E-58 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 4.9E-8 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 4.9E-8 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 4.9E-8 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 Pfam PF02540 NAD synthase 214 284 8.3E-6 T 12-10-2018 IPR022310 NAD/GMP synthase BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 Gene3D G3DSA:3.30.300.10 394 513 4.0E-52 T 12-10-2018 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 Pfam PF00117 Glutamine amidotransferase class-I 11 190 9.6E-43 T 12-10-2018 IPR017926 Glutamine amidotransferase BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 Gene3D G3DSA:3.40.50.620 200 393 6.0E-76 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 Pfam PF00958 GMP synthase C terminal domain 421 512 4.4E-45 T 12-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 BEN31_12780 a6428f8451956d8a835199bb8fab488b 513 SUPERFAMILY SSF52402 188 406 7.72E-61 T 12-10-2018 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 PRINTS PR00942 Copper-transporting ATPase 1 signature 58 68 1.4E-8 T 12-10-2018 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 1.4E-8 T 12-10-2018 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 PRINTS PR00942 Copper-transporting ATPase 1 signature 29 52 1.4E-8 T 12-10-2018 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 SUPERFAMILY SSF55008 3 68 2.62E-19 T 12-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 68 3.4E-25 T 12-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 Pfam PF00403 Heavy-metal-associated domain 5 66 5.9E-16 T 12-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 12-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 BEN31_01000 42f042a7841503c41e0554671e0d9f26 68 Gene3D G3DSA:3.30.70.100 1 67 7.3E-25 T 12-10-2018 BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 Pfam PF00107 Zinc-binding dehydrogenase 188 255 9.2E-11 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 137 4.3E-30 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 23 9.7E-8 T 12-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 SUPERFAMILY SSF51735 155 339 3.08E-50 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 Gene3D G3DSA:3.40.50.720 168 337 4.2E-129 T 12-10-2018 BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 SUPERFAMILY SSF50129 2 176 3.09E-59 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_14325 f3893b8317c32832ad5e560eb34e2035 377 Gene3D G3DSA:3.90.180.10 4 364 4.2E-129 T 12-10-2018 BEN31_03855 0e83448938a32bf60ceb4bddb582e144 380 Gene3D G3DSA:1.10.260.50 13 277 4.3E-115 T 12-10-2018 BEN31_03855 0e83448938a32bf60ceb4bddb582e144 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN31_03855 0e83448938a32bf60ceb4bddb582e144 380 PIRSF PIRSF005572 1 380 3.5E-117 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BEN31_03855 0e83448938a32bf60ceb4bddb582e144 380 Gene3D G3DSA:3.40.640.10 59 233 4.3E-115 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_03855 0e83448938a32bf60ceb4bddb582e144 380 SUPERFAMILY SSF53383 2 374 2.96E-88 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_03855 0e83448938a32bf60ceb4bddb582e144 380 Pfam PF00266 Aminotransferase class-V 2 366 1.1E-73 T 12-10-2018 IPR000192 Aminotransferase class V domain BEN31_03855 0e83448938a32bf60ceb4bddb582e144 380 Gene3D G3DSA:3.90.1150.10 2 369 4.3E-115 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_11245 d9409362b3705bf07d554b660bb4ea15 185 Gene3D G3DSA:3.20.20.400 1 185 9.5E-72 T 12-10-2018 IPR035928 GlpP-like superfamily BEN31_11245 d9409362b3705bf07d554b660bb4ea15 185 SUPERFAMILY SSF110391 7 181 6.02E-63 T 12-10-2018 IPR035928 GlpP-like superfamily BEN31_11245 d9409362b3705bf07d554b660bb4ea15 185 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 8 180 3.9E-65 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 BEN31_11245 d9409362b3705bf07d554b660bb4ea15 185 PIRSF PIRSF016897 1 185 3.9E-68 T 12-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 BEN31_14170 e4bda83e3a6794d7a576826c45ca70fc 369 PIRSF PIRSF020979 1 364 2.6E-92 T 12-10-2018 IPR011215 Phosphoribosyl transferase BEN31_14170 e4bda83e3a6794d7a576826c45ca70fc 369 Pfam PF15608 PELOTA RNA binding domain 284 363 1.2E-32 T 12-10-2018 IPR028157 PELOTA RNA-binding domain BEN31_14170 e4bda83e3a6794d7a576826c45ca70fc 369 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 258 2.1E-113 T 12-10-2018 IPR011215 Phosphoribosyl transferase BEN31_15345 6a6c1e38fb573574abc29024f083f54f 258 SUPERFAMILY SSF53067 124 253 7.99E-40 T 12-10-2018 BEN31_15345 6a6c1e38fb573574abc29024f083f54f 258 Gene3D G3DSA:3.30.420.40 1 88 2.2E-32 T 12-10-2018 BEN31_15345 6a6c1e38fb573574abc29024f083f54f 258 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 249 3.3E-89 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN31_15345 6a6c1e38fb573574abc29024f083f54f 258 Gene3D G3DSA:3.30.420.40 89 256 4.7E-62 T 12-10-2018 BEN31_15345 6a6c1e38fb573574abc29024f083f54f 258 SUPERFAMILY SSF53067 2 122 7.5E-39 T 12-10-2018 BEN31_15345 6a6c1e38fb573574abc29024f083f54f 258 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 36.879 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN31_15345 6a6c1e38fb573574abc29024f083f54f 258 Pfam PF03309 Type III pantothenate kinase 2 206 9.8E-73 T 12-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 296 5.6E-76 T 12-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 41.889 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 430 1.2E-161 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 235 250 - T 12-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 1.5E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.5E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.5E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 1.5E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 1.5E-17 T 12-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 Gene3D G3DSA:3.20.20.10 38 297 1.9E-160 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 Gene3D G3DSA:2.40.37.10 17 427 1.9E-160 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 3.0E-30 T 12-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 33 388 5.9E-18 T 12-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 SUPERFAMILY SSF51419 30 299 7.69E-80 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_05605 c67336d2922f8180368d7f6c10f6ace6 441 SUPERFAMILY SSF50621 274 431 3.56E-54 T 12-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 BEN31_10190 22215483b8a51c0647e3b2c201ac5ce2 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 3.3E-109 T 12-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BEN31_10190 22215483b8a51c0647e3b2c201ac5ce2 255 Gene3D G3DSA:3.20.20.70 1 255 4.1E-117 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_10190 22215483b8a51c0647e3b2c201ac5ce2 255 SUPERFAMILY SSF110399 1 238 6.67E-81 T 12-10-2018 BEN31_10190 22215483b8a51c0647e3b2c201ac5ce2 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.083 T 12-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 Gene3D G3DSA:3.40.50.620 1 195 2.8E-57 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 12-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 SUPERFAMILY SSF52402 3 192 5.23E-51 T 12-10-2018 BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 SUPERFAMILY SSF52467 198 318 1.62E-48 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 PIRSF PIRSF000089 1 322 8.8E-116 T 12-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 SMART SM00893 5 195 9.9E-48 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 Pfam PF01012 Electron transfer flavoprotein domain 6 179 3.9E-45 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 Gene3D G3DSA:3.40.50.1220 196 325 1.8E-57 T 12-10-2018 BEN31_03475 c4972378de0a47ab7ad231587ca3c423 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 5.2E-36 T 12-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 SUPERFAMILY SSF52096 52 382 6.63E-70 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 Gene3D G3DSA:3.30.750.44 61 352 1.0E-89 T 12-10-2018 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 SUPERFAMILY SSF50156 84 206 7.62E-22 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 Gene3D G3DSA:1.10.101.10 387 464 4.0E-15 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 SUPERFAMILY SSF47090 386 457 4.32E-16 T 12-10-2018 IPR036365 PGBD-like superfamily BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 SMART SM00228 113 184 1.7E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 SMART SM00245 186 377 2.1E-78 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 Gene3D G3DSA:3.90.226.10 201 374 1.0E-89 T 12-10-2018 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 Gene3D G3DSA:2.30.42.10 113 200 1.0E-89 T 12-10-2018 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 Pfam PF03572 Peptidase family S41 214 375 5.6E-49 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 Pfam PF13180 PDZ domain 114 190 3.7E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 65 396 3.7E-126 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BEN31_18400 0e64b013655dee584dd6e2cfc513c1c3 482 Pfam PF01471 Putative peptidoglycan binding domain 399 454 1.5E-12 T 12-10-2018 IPR002477 Peptidoglycan binding-like BEN31_04530 8696ce881027d5e6a2c527c16287fb68 371 TIGRFAM TIGR01441 GPR: GPR endopeptidase 11 371 2.3E-190 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BEN31_04530 8696ce881027d5e6a2c527c16287fb68 371 PIRSF PIRSF019549 4 371 3.4E-183 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BEN31_04530 8696ce881027d5e6a2c527c16287fb68 371 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 11 371 3.0E-169 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BEN31_04530 8696ce881027d5e6a2c527c16287fb68 371 SUPERFAMILY SSF53163 5 371 4.32E-130 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily BEN31_04530 8696ce881027d5e6a2c527c16287fb68 371 Hamap MF_00626 Germination protease [gpr]. 1 371 162.344 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BEN31_04530 8696ce881027d5e6a2c527c16287fb68 371 Pfam PF03418 Germination protease 18 370 1.3E-191 T 12-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 BEN31_02150 d3769e183b245bb1cbc8c652ffeed56f 147 SUPERFAMILY SSF69279 6 142 2.89E-49 T 12-10-2018 BEN31_02150 d3769e183b245bb1cbc8c652ffeed56f 147 Gene3D G3DSA:2.30.110.40 1 142 8.6E-60 T 12-10-2018 IPR038628 XkdM-like superfamily BEN31_02150 d3769e183b245bb1cbc8c652ffeed56f 147 Pfam PF09393 Phage tail tube protein 2 141 2.6E-52 T 12-10-2018 IPR018989 Phage tail tube protein BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 7 345 6.0E-163 T 12-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 SMART SM00829 16 344 2.6E-6 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 Gene3D G3DSA:3.90.180.10 21 337 3.7E-118 T 12-10-2018 BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 SUPERFAMILY SSF51735 146 306 4.06E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 SUPERFAMILY SSF50129 4 177 1.98E-51 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 Gene3D G3DSA:3.40.50.720 157 291 3.7E-118 T 12-10-2018 BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 137 5.8E-34 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_07775 13fc7a1ad266521d416b64db6965ded6 354 Pfam PF00107 Zinc-binding dehydrogenase 178 307 1.2E-30 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_02065 4c5a1e5d8fd60f3fe8112c595f9640f7 125 SUPERFAMILY SSF47413 3 69 5.09E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_02065 4c5a1e5d8fd60f3fe8112c595f9640f7 125 SMART SM00530 8 64 2.0E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_02065 4c5a1e5d8fd60f3fe8112c595f9640f7 125 Pfam PF01381 Helix-turn-helix 11 64 2.6E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_02065 4c5a1e5d8fd60f3fe8112c595f9640f7 125 Gene3D G3DSA:1.10.260.40 4 114 9.0E-18 T 12-10-2018 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 Pfam PF08442 ATP-grasp domain 2 203 1.1E-84 T 12-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 Pfam PF00549 CoA-ligase 262 381 1.9E-25 T 12-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 Gene3D G3DSA:3.40.50.261 240 386 7.1E-57 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.318 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 12-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 SUPERFAMILY SSF52210 239 386 1.57E-54 T 12-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 Gene3D G3DSA:3.30.470.20 1 234 1.2E-97 T 12-10-2018 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 SUPERFAMILY SSF56059 1 238 2.95E-83 T 12-10-2018 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.5E-168 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 PIRSF PIRSF001554 1 386 1.4E-156 T 12-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 BEN31_08260 9f670daf7413b50a3096baf775275e07 386 Gene3D G3DSA:3.30.1490.20 21 104 1.2E-97 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_12030 259be595e94c1818af206f1385567e76 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 2.4E-15 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN31_12030 259be595e94c1818af206f1385567e76 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.4E-15 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN31_12030 259be595e94c1818af206f1385567e76 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 2.4E-15 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN31_12030 259be595e94c1818af206f1385567e76 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 2.4E-15 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN31_12030 259be595e94c1818af206f1385567e76 156 SMART SM00226 2 149 1.4E-50 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN31_12030 259be595e94c1818af206f1385567e76 156 SUPERFAMILY SSF52788 1 150 6.41E-47 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BEN31_12030 259be595e94c1818af206f1385567e76 156 Gene3D G3DSA:3.40.50.2300 1 156 6.4E-60 T 12-10-2018 BEN31_12030 259be595e94c1818af206f1385567e76 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 147 2.9E-41 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN31_11240 6728218715644e6a7f4cffb63280097f 271 Gene3D G3DSA:1.20.1080.10 1 242 3.3E-75 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.7E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.7E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.7E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.7E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 PRINTS PR00783 Major intrinsic protein family signature 213 233 1.7E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.7E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 Pfam PF00230 Major intrinsic protein 6 230 1.9E-49 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 ProSitePatterns PS00221 MIP family signature. 62 70 - T 12-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 SUPERFAMILY SSF81338 2 234 9.42E-71 T 12-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 BEN31_11240 6728218715644e6a7f4cffb63280097f 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 4.4E-66 T 12-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 BEN31_06425 b462f4680c61e65201322f3fe4627855 342 Gene3D G3DSA:3.90.25.30 178 321 3.4E-120 T 12-10-2018 BEN31_06425 b462f4680c61e65201322f3fe4627855 342 Pfam PF02719 Polysaccharide biosynthesis protein 18 297 2.9E-103 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BEN31_06425 b462f4680c61e65201322f3fe4627855 342 SUPERFAMILY SSF51735 15 276 9.55E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_06425 b462f4680c61e65201322f3fe4627855 342 Gene3D G3DSA:3.40.50.720 15 316 3.4E-120 T 12-10-2018 BEN31_18540 506ce20c4f522a325c5158db41db46ba 216 Gene3D G3DSA:3.40.50.1000 9 188 7.1E-51 T 12-10-2018 IPR023214 HAD superfamily BEN31_18540 506ce20c4f522a325c5158db41db46ba 216 SUPERFAMILY SSF56784 5 213 2.0E-58 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_18540 506ce20c4f522a325c5158db41db46ba 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 120 184 1.8E-8 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN31_18540 506ce20c4f522a325c5158db41db46ba 216 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 4 216 43.282 T 12-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_18540 506ce20c4f522a325c5158db41db46ba 216 Gene3D G3DSA:1.10.150.240 21 83 7.1E-51 T 12-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 BEN31_18540 506ce20c4f522a325c5158db41db46ba 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 1.5E-54 T 12-10-2018 BEN31_18540 506ce20c4f522a325c5158db41db46ba 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 86 178 3.6E-10 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN31_15665 fe6968e01c409efe19ee427a53080332 219 PIRSF PIRSF000705 1 218 1.1E-64 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 BEN31_15665 fe6968e01c409efe19ee427a53080332 219 Pfam PF01712 Deoxynucleoside kinase 12 211 2.8E-64 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain BEN31_15665 fe6968e01c409efe19ee427a53080332 219 SUPERFAMILY SSF52540 11 212 6.14E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15665 fe6968e01c409efe19ee427a53080332 219 Gene3D G3DSA:3.40.50.300 9 214 3.9E-53 T 12-10-2018 BEN31_14430 85e1148313d13c01823cf7cb5a6d1601 294 Pfam PF00480 ROK family 4 283 1.1E-59 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_14430 85e1148313d13c01823cf7cb5a6d1601 294 Gene3D G3DSA:3.30.420.40 104 294 4.0E-56 T 12-10-2018 BEN31_14430 85e1148313d13c01823cf7cb5a6d1601 294 ProSitePatterns PS01125 ROK family signature. 130 155 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_14430 85e1148313d13c01823cf7cb5a6d1601 294 Gene3D G3DSA:3.30.420.40 1 103 4.8E-27 T 12-10-2018 BEN31_14430 85e1148313d13c01823cf7cb5a6d1601 294 SUPERFAMILY SSF53067 1 286 7.02E-46 T 12-10-2018 BEN31_04540 25e0e9b6cdd2c369850c5db2bb56fe51 110 ProDom PD072942 YQXA ORF79 1 107 5.0E-30 T 12-10-2018 IPR020534 Uncharacterised protein family YqxA BEN31_04540 25e0e9b6cdd2c369850c5db2bb56fe51 110 Pfam PF12438 Protein of unknown function (DUF3679) 7 62 1.8E-26 T 12-10-2018 IPR020534 Uncharacterised protein family YqxA BEN31_05825 72c56c510382167620e99b63ab590cef 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 218 3.7E-89 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BEN31_05825 72c56c510382167620e99b63ab590cef 225 Gene3D G3DSA:3.40.50.300 1 224 2.3E-86 T 12-10-2018 BEN31_05825 72c56c510382167620e99b63ab590cef 225 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 33.821 T 12-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BEN31_05825 72c56c510382167620e99b63ab590cef 225 Pfam PF02224 Cytidylate kinase 7 219 1.8E-80 T 12-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 BEN31_05825 72c56c510382167620e99b63ab590cef 225 SUPERFAMILY SSF52540 6 219 5.7E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07130 b937a9a3c198f1416543718b1c4a0037 230 SUPERFAMILY SSF51366 3 217 2.78E-48 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_07130 b937a9a3c198f1416543718b1c4a0037 230 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 199 3.3E-55 T 12-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 BEN31_07130 b937a9a3c198f1416543718b1c4a0037 230 Gene3D G3DSA:3.20.20.70 5 230 9.4E-69 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 SUPERFAMILY SSF52794 172 274 1.92E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 175 264 3.5E-17 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 Gene3D G3DSA:3.40.50.2300 170 274 1.8E-42 T 12-10-2018 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 3.7E-40 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 Pfam PF02378 Phosphotransferase system, EIIC 302 571 7.7E-10 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 9.6E-39 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 SUPERFAMILY SSF55804 1 147 3.01E-42 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 286 624 1.1E-131 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 Gene3D G3DSA:3.40.930.10 1 150 1.3E-48 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_09100 4c93d4e718b97e8bde72f2c759ebcce2 631 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 175 256 8.1E-31 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BEN31_08215 36d5178bcea020cc4470bb1a2c6a9c48 129 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 125 6.1E-36 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BEN31_08215 36d5178bcea020cc4470bb1a2c6a9c48 129 Pfam PF00460 Flagella basal body rod protein 9 38 3.4E-9 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN31_08215 36d5178bcea020cc4470bb1a2c6a9c48 129 PIRSF PIRSF002889 2 128 1.5E-33 T 12-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 BEN31_08215 36d5178bcea020cc4470bb1a2c6a9c48 129 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN31_04290 36dc86111050548e8d7117e0b5f4433c 210 SMART SM00934 2 203 1.8E-36 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_04290 36dc86111050548e8d7117e0b5f4433c 210 Gene3D G3DSA:3.20.20.70 1 210 6.3E-71 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_04290 36dc86111050548e8d7117e0b5f4433c 210 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 207 1.6E-82 T 12-10-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 BEN31_04290 36dc86111050548e8d7117e0b5f4433c 210 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 202 1.4E-26 T 12-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_04290 36dc86111050548e8d7117e0b5f4433c 210 SUPERFAMILY SSF51366 2 207 6.38E-37 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 439 29.631 T 12-10-2018 IPR020823 Cell division protein FtsA BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 6.2E-130 T 12-10-2018 IPR020823 Cell division protein FtsA BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 SUPERFAMILY SSF53067 197 368 2.49E-43 T 12-10-2018 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Gene3D G3DSA:3.90.640.10 233 298 3.9E-111 T 12-10-2018 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 206 219 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 SMART SM00842 7 194 4.7E-91 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Gene3D G3DSA:3.30.420.40 10 363 3.9E-111 T 12-10-2018 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Gene3D G3DSA:3.30.420.40 195 349 3.9E-111 T 12-10-2018 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Gene3D G3DSA:3.30.1490.110 83 167 3.9E-111 T 12-10-2018 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 PIRSF PIRSF003101 1 439 1.4E-148 T 12-10-2018 IPR020823 Cell division protein FtsA BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Pfam PF14450 Cell division protein FtsA 205 366 4.8E-24 T 12-10-2018 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 SUPERFAMILY SSF53067 6 195 8.47E-57 T 12-10-2018 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Pfam PF02491 SHS2 domain inserted in FTSA 81 160 7.3E-25 T 12-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 BEN31_08685 590225283d6fe2249ffba99a64e74b60 440 Pfam PF14450 Cell division protein FtsA 9 187 6.3E-9 T 12-10-2018 BEN31_16570 e90e294cf853b728ea64949912ea9475 199 Pfam PF09819 ABC-type cobalt transport system, permease component 6 124 3.2E-38 T 12-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted BEN31_16570 e90e294cf853b728ea64949912ea9475 199 PIRSF PIRSF037394 1 190 1.1E-64 T 12-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted BEN31_10815 db289c46ad1c75bfd59d4ce361fa67e0 194 SUPERFAMILY SSF53254 2 190 6.68E-59 T 12-10-2018 IPR029033 Histidine phosphatase superfamily BEN31_10815 db289c46ad1c75bfd59d4ce361fa67e0 194 PIRSF PIRSF000709 2 109 5.9E-7 T 12-10-2018 BEN31_10815 db289c46ad1c75bfd59d4ce361fa67e0 194 PIRSF PIRSF000709 129 160 32.0 T 12-10-2018 BEN31_10815 db289c46ad1c75bfd59d4ce361fa67e0 194 Gene3D G3DSA:3.40.50.1240 1 193 8.6E-55 T 12-10-2018 IPR029033 Histidine phosphatase superfamily BEN31_10815 db289c46ad1c75bfd59d4ce361fa67e0 194 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 12-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 BEN31_10815 db289c46ad1c75bfd59d4ce361fa67e0 194 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 183 1.9E-53 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN31_10815 db289c46ad1c75bfd59d4ce361fa67e0 194 SMART SM00855 3 146 1.9E-25 T 12-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 BEN31_06805 fee0ab9bead120c9a5c1bc23be8403bb 273 SUPERFAMILY SSF46955 11 119 4.76E-22 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_06805 fee0ab9bead120c9a5c1bc23be8403bb 273 SUPERFAMILY SSF55136 125 268 7.32E-14 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_06805 fee0ab9bead120c9a5c1bc23be8403bb 273 Pfam PF13411 MerR HTH family regulatory protein 12 76 1.2E-10 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_06805 fee0ab9bead120c9a5c1bc23be8403bb 273 SMART SM00422 9 78 3.1E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_06805 fee0ab9bead120c9a5c1bc23be8403bb 273 Gene3D G3DSA:1.10.1660.10 8 136 2.3E-25 T 12-10-2018 BEN31_06805 fee0ab9bead120c9a5c1bc23be8403bb 273 Gene3D G3DSA:3.20.80.10 195 270 2.2E-8 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 Gene3D G3DSA:1.10.1740.10 14 96 3.2E-27 T 12-10-2018 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 Pfam PF04542 Sigma-70 region 2 27 99 4.3E-15 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 SUPERFAMILY SSF88659 100 168 3.14E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 SUPERFAMILY SSF88946 6 99 9.26E-25 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 SUPERFAMILY SSF88659 163 251 1.4E-20 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 Gene3D G3DSA:1.20.140.160 98 252 1.7E-43 T 12-10-2018 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 Pfam PF04545 Sigma-70, region 4 200 247 3.3E-15 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 54 67 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 Pfam PF04539 Sigma-70 region 3 106 184 2.1E-10 T 12-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 PRINTS PR00046 Major sigma-70 factor signature 234 245 3.4E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 PRINTS PR00046 Major sigma-70 factor signature 219 234 3.4E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 PRINTS PR00046 Major sigma-70 factor signature 54 67 3.4E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 PRINTS PR00046 Major sigma-70 factor signature 78 86 3.4E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 PRINTS PR00046 Major sigma-70 factor signature 202 214 3.4E-13 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 248 1.7E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 27 249 1.6E-85 T 12-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 PIRSF PIRSF000770 5 255 4.2E-39 T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_08065 d8c87340d21e3a02fb2e1e3bf0a37e57 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 12-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 BEN31_18410 7261787c79cf2dfb5c34178039e9d8c8 395 SUPERFAMILY SSF50156 301 386 9.33E-13 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_18410 7261787c79cf2dfb5c34178039e9d8c8 395 Pfam PF13180 PDZ domain 297 349 3.8E-6 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_18410 7261787c79cf2dfb5c34178039e9d8c8 395 SMART SM00228 293 359 0.0012 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_18410 7261787c79cf2dfb5c34178039e9d8c8 395 Gene3D G3DSA:2.30.42.10 282 376 8.2E-11 T 12-10-2018 BEN31_02725 934f15fad57191024d2b2a8de1da660c 321 SUPERFAMILY SSF161098 77 306 1.31E-47 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_02725 934f15fad57191024d2b2a8de1da660c 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 314 1.5E-14 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_02725 934f15fad57191024d2b2a8de1da660c 321 Gene3D G3DSA:1.10.3720.10 73 321 1.2E-59 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_14910 02f28bd133043544b45bbad98217afb8 131 Pfam PF00411 Ribosomal protein S11 21 130 6.4E-52 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BEN31_14910 02f28bd133043544b45bbad98217afb8 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 131 34.407 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BEN31_14910 02f28bd133043544b45bbad98217afb8 131 Gene3D G3DSA:3.30.420.80 3 131 9.1E-54 T 12-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_14910 02f28bd133043544b45bbad98217afb8 131 SUPERFAMILY SSF53137 16 131 2.81E-49 T 12-10-2018 BEN31_14910 02f28bd133043544b45bbad98217afb8 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 5.8E-58 T 12-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_14910 02f28bd133043544b45bbad98217afb8 131 PIRSF PIRSF002131 1 131 2.1E-53 T 12-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 BEN31_14910 02f28bd133043544b45bbad98217afb8 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 12-10-2018 IPR018102 Ribosomal S11, conserved site BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 8.6E-109 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 1.7E-28 T 12-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 Gene3D G3DSA:3.30.43.10 1 88 4.5E-28 T 12-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 Gene3D G3DSA:3.30.465.10 89 216 3.2E-49 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 SUPERFAMILY SSF56194 197 301 2.88E-36 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 Gene3D G3DSA:3.90.78.10 217 303 2.8E-34 T 12-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 Pfam PF01565 FAD binding domain 35 164 1.5E-22 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 SUPERFAMILY SSF56176 14 193 8.36E-44 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN31_08710 a92b9a6d207946c8a519d094f7b30240 303 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 303 90.949 T 12-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 Gene3D G3DSA:3.40.190.290 90 299 1.5E-53 T 12-10-2018 BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 57 6.9E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 Gene3D G3DSA:1.10.10.10 1 89 7.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 SUPERFAMILY SSF46785 2 107 8.05E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 SUPERFAMILY SSF53850 87 298 3.98E-37 T 12-10-2018 BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 Pfam PF03466 LysR substrate binding domain 86 297 1.4E-47 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 14 25 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 46 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_14030 6c707051eae81c88e19d6cb36c124307 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 35 2.6E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_05105 594ce87376596e325b61081c8a8729d3 210 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 111 5.0E-36 T 12-10-2018 IPR014245 Sporulation stage III, protein AF BEN31_05105 594ce87376596e325b61081c8a8729d3 210 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 198 2.5E-37 T 12-10-2018 IPR014245 Sporulation stage III, protein AF BEN31_03925 754fd2adc4a239f270129cb81f67e255 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 374 5.7E-179 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN31_03925 754fd2adc4a239f270129cb81f67e255 381 Gene3D G3DSA:3.20.20.105 3 375 2.5E-173 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN31_03925 754fd2adc4a239f270129cb81f67e255 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 367 2.4E-94 T 12-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN31_03925 754fd2adc4a239f270129cb81f67e255 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 370 58.17 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN31_03925 754fd2adc4a239f270129cb81f67e255 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 375 2.0E-190 T 12-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN31_03925 754fd2adc4a239f270129cb81f67e255 381 SUPERFAMILY SSF51713 7 371 3.27E-163 T 12-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 30 142 8.7E-28 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 Gene3D G3DSA:1.20.140.10 422 593 4.5E-55 T 12-10-2018 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 SUPERFAMILY SSF56645 20 262 3.27E-72 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 148 160 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 SUPERFAMILY SSF47203 249 421 2.9E-40 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 377 396 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 Gene3D G3DSA:2.40.110.10 145 250 1.6E-35 T 12-10-2018 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 251 414 5.1E-34 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 Gene3D G3DSA:1.20.140.10 251 421 1.7E-50 T 12-10-2018 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 Gene3D G3DSA:1.10.540.10 1 144 1.4E-42 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN31_01320 e8cc788108df290e58a880a050067ee7 593 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 146 238 2.8E-22 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 Gene3D G3DSA:1.10.10.10 2 145 1.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 Pfam PF01047 MarR family 28 85 3.3E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 4.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 4.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 4.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 4.1E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 SUPERFAMILY SSF46785 4 143 4.43E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN31_12860 1072f61cf40eff5cc1dd4e2e8285f796 150 SMART SM00347 21 121 6.9E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07090 5dfc9c188d7400cc5ef4d1f6a1160f32 506 SUPERFAMILY SSF103473 8 497 4.45E-79 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_07090 5dfc9c188d7400cc5ef4d1f6a1160f32 506 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 484 2.0E-86 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BEN31_07090 5dfc9c188d7400cc5ef4d1f6a1160f32 506 Pfam PF07690 Major Facilitator Superfamily 18 409 2.6E-59 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_07090 5dfc9c188d7400cc5ef4d1f6a1160f32 506 Gene3D G3DSA:1.20.1720.10 14 222 6.4E-56 T 12-10-2018 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 Pfam PF02743 Cache domain 44 265 5.0E-28 T 12-10-2018 IPR033479 Double Cache domain 1 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 Gene3D G3DSA:3.30.450.20 60 265 2.7E-31 T 12-10-2018 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 Pfam PF00672 HAMP domain 303 352 2.6E-14 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 Gene3D G3DSA:3.30.450.20 71 183 2.7E-31 T 12-10-2018 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 SUPERFAMILY SSF103190 87 193 3.92E-7 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 Gene3D G3DSA:1.10.8.500 303 353 2.5E-10 T 12-10-2018 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 SMART SM00283 384 659 4.9E-100 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 SUPERFAMILY SSF58104 323 659 1.28E-75 T 12-10-2018 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 Gene3D G3DSA:1.10.287.950 354 659 9.4E-74 T 12-10-2018 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 SMART SM00319 32 151 0.0024 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 7.3E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 509 7.3E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 540 7.3E-25 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 SMART SM00304 303 355 6.1E-17 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02015 b6dcfa415df956c280d89b3a73176b65 662 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 431 613 2.8E-56 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_15510 7a66219ba94825beec528be0f0a94308 255 Pfam PF01026 TatD related DNase 3 252 1.6E-90 T 12-10-2018 IPR001130 TatD family GO:0016788 BEN31_15510 7a66219ba94825beec528be0f0a94308 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN31_15510 7a66219ba94825beec528be0f0a94308 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN31_15510 7a66219ba94825beec528be0f0a94308 255 Gene3D G3DSA:3.20.20.140 1 255 1.9E-113 T 12-10-2018 BEN31_15510 7a66219ba94825beec528be0f0a94308 255 PIRSF PIRSF005902 1 255 3.4E-93 T 12-10-2018 IPR001130 TatD family GO:0016788 BEN31_15510 7a66219ba94825beec528be0f0a94308 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 12-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 BEN31_15510 7a66219ba94825beec528be0f0a94308 255 SUPERFAMILY SSF51556 2 254 1.07E-97 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_15510 7a66219ba94825beec528be0f0a94308 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 7.0E-104 T 12-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 BEN31_02180 3731886f46bc6f8a04bdc735988b282a 140 Pfam PF10934 Protein of unknown function (DUF2634) 24 121 4.2E-25 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 BEN31_02180 3731886f46bc6f8a04bdc735988b282a 140 ProDom PD033094 XKDS PHAGE-LIKE PBSX ELEMENT PHAGE LIN1286 RELATED YQBS 20 136 3.0E-39 T 12-10-2018 IPR020288 Protein of unknown function DUF2634 BEN31_14470 7b5309e09180aeddb41690be2453817e 539 PIRSF PIRSF006060 1 459 2.1E-74 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_14470 7b5309e09180aeddb41690be2453817e 539 PIRSF PIRSF006060 428 533 130.0 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_14470 7b5309e09180aeddb41690be2453817e 539 Gene3D G3DSA:1.20.1740.10 1 459 1.4E-78 T 12-10-2018 BEN31_14470 7b5309e09180aeddb41690be2453817e 539 Pfam PF13520 Amino acid permease 9 425 2.6E-49 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_16360 d10bb0b1a1b4e32c35d631c1ed46aff4 319 SMART SM00382 39 235 1.6E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16360 d10bb0b1a1b4e32c35d631c1ed46aff4 319 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16360 d10bb0b1a1b4e32c35d631c1ed46aff4 319 SUPERFAMILY SSF52540 12 232 5.11E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16360 d10bb0b1a1b4e32c35d631c1ed46aff4 319 Gene3D G3DSA:3.40.50.300 3 269 1.3E-63 T 12-10-2018 BEN31_16360 d10bb0b1a1b4e32c35d631c1ed46aff4 319 Pfam PF00005 ABC transporter 31 171 2.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_10540 cd0ba9482eb351527b65a546b459f2c2 604 Gene3D G3DSA:1.10.510.40 383 576 5.4E-58 T 12-10-2018 BEN31_10540 cd0ba9482eb351527b65a546b459f2c2 604 Gene3D G3DSA:1.10.274.90 2 133 3.2E-21 T 12-10-2018 BEN31_10540 cd0ba9482eb351527b65a546b459f2c2 604 Pfam PF04183 IucA / IucC family 145 393 3.6E-72 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 BEN31_10540 cd0ba9482eb351527b65a546b459f2c2 604 Pfam PF06276 Ferric iron reductase FhuF-like transporter 416 576 5.0E-45 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain BEN31_05570 e0ef5b46a5b6131ca834306ee42ba436 206 Gene3D G3DSA:2.60.480.10 1 97 2.9E-13 T 12-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily BEN31_05570 e0ef5b46a5b6131ca834306ee42ba436 206 Pfam PF12164 Stage V sporulation protein AA 4 88 1.4E-20 T 12-10-2018 IPR021997 Stage V sporulation protein AA BEN31_09920 6c97c6dd024efd81e57bf19f16d2d5bb 182 Pfam PF06114 IrrE N-terminal-like domain 46 147 1.1E-14 T 12-10-2018 IPR010359 IrrE N-terminal-like domain BEN31_00455 69cfe855a9c44015a638ac6a09696b7b 227 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 27 223 8.5E-61 T 12-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 BEN31_00455 69cfe855a9c44015a638ac6a09696b7b 227 Pfam PF13614 AAA domain 58 176 1.0E-13 T 12-10-2018 IPR025669 AAA domain BEN31_00455 69cfe855a9c44015a638ac6a09696b7b 227 Gene3D G3DSA:3.40.50.300 2 227 1.7E-69 T 12-10-2018 BEN31_00455 69cfe855a9c44015a638ac6a09696b7b 227 SUPERFAMILY SSF52540 46 217 1.24E-35 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10875 bbd65f4397bcae10d479c86ff62cf7c4 470 Gene3D G3DSA:1.10.3110.10 110 203 6.9E-152 T 12-10-2018 BEN31_10875 bbd65f4397bcae10d479c86ff62cf7c4 470 SUPERFAMILY SSF51905 6 460 9.62E-49 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10875 bbd65f4397bcae10d479c86ff62cf7c4 470 Pfam PF01593 Flavin containing amine oxidoreductase 15 460 1.4E-64 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BEN31_10875 bbd65f4397bcae10d479c86ff62cf7c4 470 Gene3D G3DSA:3.90.660.20 44 414 6.9E-152 T 12-10-2018 BEN31_10875 bbd65f4397bcae10d479c86ff62cf7c4 470 SUPERFAMILY SSF54373 308 415 4.19E-33 T 12-10-2018 BEN31_10875 bbd65f4397bcae10d479c86ff62cf7c4 470 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 5 470 3.7E-156 T 12-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 BEN31_10875 bbd65f4397bcae10d479c86ff62cf7c4 470 Gene3D G3DSA:3.50.50.60 9 456 6.9E-152 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_04155 2684490cf1e4be078d5d924ba4653106 221 Pfam PF07423 Protein of unknown function (DUF1510) 5 220 1.5E-78 T 12-10-2018 IPR009988 Protein of unknown function DUF1510 BEN31_05150 055812004c9b4e5648ab7f897a3ae2fd 86 Pfam PF02609 Exonuclease VII small subunit 14 63 1.2E-20 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN31_05150 055812004c9b4e5648ab7f897a3ae2fd 86 Gene3D G3DSA:1.10.287.1040 7 83 9.4E-23 T 12-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 BEN31_05150 055812004c9b4e5648ab7f897a3ae2fd 86 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 13 73 14.611 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN31_05150 055812004c9b4e5648ab7f897a3ae2fd 86 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 13 68 4.0E-22 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN31_05150 055812004c9b4e5648ab7f897a3ae2fd 86 SUPERFAMILY SSF116842 7 76 2.35E-21 T 12-10-2018 BEN31_05150 055812004c9b4e5648ab7f897a3ae2fd 86 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 13 52 5.0E-14 T 12-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 BEN31_07405 e2c83ac3b9f58edaef119163809725fc 160 PIRSF PIRSF021441 1 159 2.4E-70 T 12-10-2018 IPR031306 CcdC protein BEN31_07405 e2c83ac3b9f58edaef119163809725fc 160 Pfam PF07301 Protein of unknown function (DUF1453) 5 148 5.9E-61 T 12-10-2018 IPR009916 Protein of unknown function DUF1453 BEN31_09875 52f318c1be5326c4f88e2df6d1dfc26b 457 Pfam PF03611 PTS system sugar-specific permease component 9 391 1.2E-85 T 12-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 BEN31_09875 52f318c1be5326c4f88e2df6d1dfc26b 457 PIRSF PIRSF006304 2 454 1.1E-177 T 12-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 BEN31_14140 1ab1bbadcc6b3434ab052a2b77ab222d 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 190 293 4.8E-22 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BEN31_14140 1ab1bbadcc6b3434ab052a2b77ab222d 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 172 6.3E-40 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BEN31_14140 1ab1bbadcc6b3434ab052a2b77ab222d 293 Gene3D G3DSA:3.40.190.230 34 291 2.9E-117 T 12-10-2018 BEN31_14140 1ab1bbadcc6b3434ab052a2b77ab222d 293 SUPERFAMILY SSF53850 33 186 3.26E-50 T 12-10-2018 BEN31_14140 1ab1bbadcc6b3434ab052a2b77ab222d 293 Gene3D G3DSA:3.10.105.10 116 272 2.9E-117 T 12-10-2018 BEN31_14140 1ab1bbadcc6b3434ab052a2b77ab222d 293 SUPERFAMILY SSF53850 188 293 6.52E-26 T 12-10-2018 BEN31_07255 820ddc5c33eda8465513d0c366fb4442 139 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 6 134 3.5E-73 T 12-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 BEN31_07255 820ddc5c33eda8465513d0c366fb4442 139 Gene3D G3DSA:3.40.50.2300 1 139 1.1E-60 T 12-10-2018 BEN31_07255 820ddc5c33eda8465513d0c366fb4442 139 SUPERFAMILY SSF52788 4 136 6.28E-47 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BEN31_07255 820ddc5c33eda8465513d0c366fb4442 139 SMART SM00226 4 137 1.5E-65 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN31_07255 820ddc5c33eda8465513d0c366fb4442 139 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 135 2.1E-24 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN31_07255 820ddc5c33eda8465513d0c366fb4442 139 Hamap MF_01624 Arsenate reductase [arsC]. 1 137 46.186 T 12-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 SMART SM00981 57 156 1.0E-11 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 Gene3D G3DSA:3.30.2130.30 8 247 2.8E-125 T 12-10-2018 BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 197 208 - T 12-10-2018 IPR000241 Putative RNA methylase domain BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 SUPERFAMILY SSF53335 145 362 1.3E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 301 307 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 Gene3D G3DSA:3.40.50.150 162 367 2.8E-125 T 12-10-2018 BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 Pfam PF01170 Putative RNA methylase family UPF0020 164 368 1.2E-66 T 12-10-2018 IPR000241 Putative RNA methylase domain BEN31_06190 3b15cbd7c923c4217f8ee6845374a78f 384 Pfam PF02926 THUMP domain 18 155 7.2E-17 T 12-10-2018 IPR004114 THUMP domain GO:0003723 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 Pfam PF01566 Natural resistance-associated macrophage protein 50 398 7.2E-118 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 28 392 1.0E-130 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 21 424 38.12 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 109 135 2.0E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 137 156 2.0E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 212 235 2.0E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 314 333 2.0E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_13475 23788da532827fe1a8e4af7411000a19 425 PRINTS PR00447 Natural resistance-associated macrophage protein signature 162 183 2.0E-31 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.3E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 1.3E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 1.3E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 1.3E-15 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 Pfam PF00561 alpha/beta hydrolase fold 31 263 4.6E-25 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00412 Epoxide hydrolase signature 100 113 3.9E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00412 Epoxide hydrolase signature 218 234 3.9E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00412 Epoxide hydrolase signature 251 273 3.9E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 PRINTS PR00412 Epoxide hydrolase signature 36 54 3.9E-5 T 12-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 SUPERFAMILY SSF53474 16 273 7.18E-58 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_01910 b69bf38938f00f24c530dc4b1090f9b6 276 Gene3D G3DSA:3.40.50.1820 7 275 7.2E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_14990 3323c3261d32e29c37205279aae0491b 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 12-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_14990 3323c3261d32e29c37205279aae0491b 103 SUPERFAMILY SSF50104 1 100 2.78E-39 T 12-10-2018 IPR008991 Translation protein SH3-like domain superfamily BEN31_14990 3323c3261d32e29c37205279aae0491b 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 4.2E-30 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14990 3323c3261d32e29c37205279aae0491b 103 Pfam PF00467 KOW motif 5 36 8.6E-9 T 12-10-2018 IPR005824 KOW BEN31_14990 3323c3261d32e29c37205279aae0491b 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 22.934 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14990 3323c3261d32e29c37205279aae0491b 103 Gene3D G3DSA:2.30.30.30 1 100 1.4E-42 T 12-10-2018 IPR014722 Ribosomal protein L2, domain 2 BEN31_14990 3323c3261d32e29c37205279aae0491b 103 SMART SM00739 2 29 7.4E-6 T 12-10-2018 IPR005824 KOW BEN31_14990 3323c3261d32e29c37205279aae0491b 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 1.3E-41 T 12-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 Gene3D G3DSA:1.20.120.140 6 307 6.1E-129 T 12-10-2018 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 Pfam PF02978 Signal peptide binding domain 329 427 3.0E-35 T 12-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 SUPERFAMILY SSF47446 329 430 2.78E-39 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 8.3E-23 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 SUPERFAMILY SSF52540 43 355 4.78E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 SMART SM00962 101 297 5.5E-122 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 1.3E-191 T 12-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 Gene3D G3DSA:1.10.260.30 328 444 5.7E-45 T 12-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 SMART SM00382 100 302 2.3E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 Gene3D G3DSA:3.40.50.300 91 286 6.1E-129 T 12-10-2018 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 5.0E-79 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 434 35.822 T 12-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 BEN31_08315 e03bd70dacd3619a2eec474d47d5b619 446 SMART SM00963 2 87 1.1E-34 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_05660 cef1c60c52f5e6745c3cadbd16174d91 174 Gene3D G3DSA:1.20.58.500 4 100 5.5E-15 T 12-10-2018 BEN31_05660 cef1c60c52f5e6745c3cadbd16174d91 174 SUPERFAMILY SSF140663 2 127 1.96E-31 T 12-10-2018 IPR023203 TTHA0068-like superfamily BEN31_05660 cef1c60c52f5e6745c3cadbd16174d91 174 Pfam PF03745 Domain of unknown function (DUF309) 7 66 1.1E-23 T 12-10-2018 IPR005500 Protein of unknown function DUF309 BEN31_16700 73ffb76e7acee4de4c21390c395f8742 436 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 428 5.2E-105 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BEN31_16700 73ffb76e7acee4de4c21390c395f8742 436 Pfam PF02378 Phosphotransferase system, EIIC 29 360 1.5E-45 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_16700 73ffb76e7acee4de4c21390c395f8742 436 PIRSF PIRSF006351 1 436 6.9E-132 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_13725 07d6644ab22c3925d3965396d725ac92 462 PIRSF PIRSF006060 1 461 9.2E-83 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_13725 07d6644ab22c3925d3965396d725ac92 462 Gene3D G3DSA:1.20.1740.10 4 461 4.8E-70 T 12-10-2018 BEN31_13725 07d6644ab22c3925d3965396d725ac92 462 Pfam PF13520 Amino acid permease 12 435 1.4E-42 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_17420 5c6b04b96cbcfd48e0afcb27d1edf090 332 Gene3D G3DSA:3.40.50.10740 4 164 5.0E-56 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BEN31_17420 5c6b04b96cbcfd48e0afcb27d1edf090 332 SUPERFAMILY SSF52317 4 164 2.7E-43 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_17420 5c6b04b96cbcfd48e0afcb27d1edf090 332 PIRSF PIRSF028757 1 332 7.0E-80 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_17420 5c6b04b96cbcfd48e0afcb27d1edf090 332 Gene3D G3DSA:3.50.30.60 165 332 4.4E-52 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_17420 5c6b04b96cbcfd48e0afcb27d1edf090 332 Pfam PF02016 LD-carboxypeptidase 13 317 5.1E-68 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_17420 5c6b04b96cbcfd48e0afcb27d1edf090 332 SUPERFAMILY SSF141986 171 323 1.1E-37 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_03005 a32e2f8c43bca1f1f4762e05948d8d3f 447 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 424 1.9E-152 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BEN31_03005 a32e2f8c43bca1f1f4762e05948d8d3f 447 Pfam PF05525 Branched-chain amino acid transport protein 8 437 2.4E-161 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 ProSitePatterns PS00785 5'-nucleotidase signature 1. 668 680 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 SUPERFAMILY SSF55816 975 1174 8.11E-60 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 PRINTS PR01607 Apyrase family signature 880 903 4.0E-39 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 PRINTS PR01607 Apyrase family signature 1112 1131 4.0E-39 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 PRINTS PR01607 Apyrase family signature 911 931 4.0E-39 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 PRINTS PR01607 Apyrase family signature 861 878 4.0E-39 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 PRINTS PR01607 Apyrase family signature 1034 1057 4.0E-39 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 PRINTS PR01607 Apyrase family signature 666 684 4.0E-39 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Gene3D G3DSA:3.60.21.10 35 373 8.2E-132 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Gene3D G3DSA:3.90.780.10 422 609 2.4E-58 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 ProSitePatterns PS00786 5'-nucleotidase signature 2. 134 145 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 SUPERFAMILY SSF56300 663 972 1.27E-76 T 12-10-2018 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Pfam PF02872 5'-nucleotidase, C-terminal domain 976 1138 6.1E-48 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Pfam PF02872 5'-nucleotidase, C-terminal domain 375 572 6.5E-23 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Gene3D G3DSA:3.60.21.10 657 979 3.7E-89 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1390 1422 2.4E-4 T 12-10-2018 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Gene3D G3DSA:3.90.780.10 980 1177 9.1E-68 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Pfam PF00746 LPXTG cell wall anchor motif 1389 1422 8.2E-4 T 12-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 SUPERFAMILY SSF56300 41 372 3.28E-79 T 12-10-2018 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 SUPERFAMILY SSF55816 374 610 4.45E-45 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 ProSitePatterns PS00785 5'-nucleotidase signature 1. 45 57 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Pfam PF00149 Calcineurin-like phosphoesterase 668 897 1.7E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_12050 f6fe5251bf402781799fa7075d54c62f 1429 Pfam PF00149 Calcineurin-like phosphoesterase 46 284 4.9E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_03975 6ebe6e0b68f456a6087a2bab3a4ed8ce 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.792 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BEN31_03975 6ebe6e0b68f456a6087a2bab3a4ed8ce 170 SUPERFAMILY SSF53271 2 163 2.7E-49 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_03975 6ebe6e0b68f456a6087a2bab3a4ed8ce 170 Gene3D G3DSA:3.40.50.2020 1 170 6.4E-59 T 12-10-2018 BEN31_03975 6ebe6e0b68f456a6087a2bab3a4ed8ce 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 5.0E-71 T 12-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 BEN31_03975 6ebe6e0b68f456a6087a2bab3a4ed8ce 170 Pfam PF00156 Phosphoribosyl transferase domain 36 148 1.3E-14 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 369 2.1E-130 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.873 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 Gene3D G3DSA:3.60.150.10 1 389 1.6E-157 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 Pfam PF01264 Chorismate synthase 1 364 4.8E-126 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 12-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 SUPERFAMILY SSF103263 1 388 2.62E-151 T 12-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_05925 9847c29ea3f40e699846fe9cd11ffdc1 390 PIRSF PIRSF001456 1 384 3.5E-134 T 12-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 BEN31_04360 ba70a7a85a3dd6f94b4c47c351adb4b2 108 Gene3D G3DSA:1.20.225.10 39 108 7.8E-29 T 12-10-2018 IPR009086 Bacteriocin AS-48 BEN31_04360 ba70a7a85a3dd6f94b4c47c351adb4b2 108 Pfam PF09221 Bacteriocin class IId cyclical uberolysin-like 42 108 1.2E-12 T 12-10-2018 IPR020038 Circular bacteriocin, circularin A/uberolysin family BEN31_04360 ba70a7a85a3dd6f94b4c47c351adb4b2 108 SUPERFAMILY SSF47869 39 108 2.35E-30 T 12-10-2018 BEN31_04360 ba70a7a85a3dd6f94b4c47c351adb4b2 108 TIGRFAM TIGR03651 circ_ocin_uber: circular bacteriocin, circularin A/uberolysin family 38 108 2.3E-21 T 12-10-2018 IPR020038 Circular bacteriocin, circularin A/uberolysin family BEN31_11685 944c8de31405f7688aacc92dd527df66 603 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 9 465 3.4E-57 T 12-10-2018 IPR013407 CRISPR-associated protein Cmr2 BEN31_11685 944c8de31405f7688aacc92dd527df66 603 Pfam PF12469 CRISPR-associated protein 10 103 2.0E-17 T 12-10-2018 IPR024615 CRISPR-associated protein Cmr2, N-terminal BEN31_11685 944c8de31405f7688aacc92dd527df66 603 Gene3D G3DSA:3.30.70.2230 342 487 2.7E-38 T 12-10-2018 BEN31_11685 944c8de31405f7688aacc92dd527df66 603 Gene3D G3DSA:3.30.70.2220 5 231 2.7E-23 T 12-10-2018 IPR038242 Cmr2, N-terminal domain superfamily BEN31_03470 980be4fad7fea39d48248bcb842d334b 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 12-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BEN31_03470 980be4fad7fea39d48248bcb842d334b 257 Pfam PF01012 Electron transfer flavoprotein domain 23 206 8.7E-47 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN31_03470 980be4fad7fea39d48248bcb842d334b 257 PIRSF PIRSF000090 1 257 1.8E-75 T 12-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 BEN31_03470 980be4fad7fea39d48248bcb842d334b 257 SUPERFAMILY SSF52402 1 243 7.54E-74 T 12-10-2018 BEN31_03470 980be4fad7fea39d48248bcb842d334b 257 SMART SM00893 21 211 2.6E-60 T 12-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 BEN31_03470 980be4fad7fea39d48248bcb842d334b 257 Gene3D G3DSA:3.40.50.620 1 256 5.6E-80 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 SUPERFAMILY SSF53955 72 284 1.21E-72 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 SUPERFAMILY SSF49265 702 778 1.2E-7 T 12-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 Gene3D G3DSA:1.10.3810.10 94 286 1.7E-210 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 Pfam PF00905 Penicillin binding protein transpeptidase domain 352 638 7.8E-46 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 94 640 1.4E-176 T 12-10-2018 BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 Pfam PF00912 Transglycosylase 85 259 9.5E-63 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 Gene3D G3DSA:3.90.1310.20 79 535 1.7E-210 T 12-10-2018 BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 SUPERFAMILY SSF56601 241 698 1.79E-106 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 Gene3D G3DSA:3.40.710.10 327 652 1.7E-210 T 12-10-2018 BEN31_06115 400e3605e08e7ac1288507ec1008f2ba 902 Gene3D G3DSA:2.60.40.10 700 794 1.7E-9 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_06710 bc0d4209677bdb5a1648cb6eda64c2b6 310 Gene3D G3DSA:1.10.10.10 1 61 2.5E-12 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06710 bc0d4209677bdb5a1648cb6eda64c2b6 310 Pfam PF08279 HTH domain 5 56 1.4E-12 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_06710 bc0d4209677bdb5a1648cb6eda64c2b6 310 PIRSF PIRSF016838 1 309 3.0E-25 T 12-10-2018 IPR028349 Protein PafC BEN31_06710 bc0d4209677bdb5a1648cb6eda64c2b6 310 SUPERFAMILY SSF46785 2 58 1.87E-8 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06710 bc0d4209677bdb5a1648cb6eda64c2b6 310 Pfam PF13280 WYL domain 136 302 2.4E-31 T 12-10-2018 IPR026881 WYL domain BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 SUPERFAMILY SSF103190 88 189 6.2E-8 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 Gene3D G3DSA:3.30.450.20 59 265 7.0E-23 T 12-10-2018 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 Gene3D G3DSA:3.30.450.20 71 181 7.0E-23 T 12-10-2018 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 Pfam PF00672 HAMP domain 302 350 5.2E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 SMART SM00283 382 657 1.6E-86 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 Gene3D G3DSA:1.10.287.950 364 657 4.5E-71 T 12-10-2018 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 SMART SM00304 301 353 7.0E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 Gene3D G3DSA:1.10.8.500 300 353 4.1E-13 T 12-10-2018 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 SUPERFAMILY SSF58104 321 657 7.98E-74 T 12-10-2018 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 Pfam PF02743 Cache domain 53 263 3.9E-20 T 12-10-2018 IPR033479 Double Cache domain 1 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 480 507 9.7E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 509 538 9.7E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 399 428 9.7E-23 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_02010 6c69d482f182437cf5ff018dc672664a 658 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 610 2.7E-51 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_13065 2e2fcc39a12fe2a25bbf5fbb70522646 182 SUPERFAMILY SSF53597 7 168 4.58E-37 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_13065 2e2fcc39a12fe2a25bbf5fbb70522646 182 Pfam PF01872 RibD C-terminal domain 11 168 8.1E-22 T 12-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 BEN31_13065 2e2fcc39a12fe2a25bbf5fbb70522646 182 Gene3D G3DSA:3.40.430.10 5 177 2.1E-48 T 12-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 206 1.8E-25 T 12-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 PIRSF PIRSF002845 1 490 1.8E-218 T 12-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 Gene3D G3DSA:1.10.287.1080 356 490 5.6E-44 T 12-10-2018 BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 SUPERFAMILY SSF53790 3 255 9.3E-34 T 12-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 SUPERFAMILY SSF101386 362 464 8.22E-22 T 12-10-2018 BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 TIGRFAM TIGR00444 mazG: MazG family protein 239 486 2.3E-104 T 12-10-2018 IPR011551 NTP pyrophosphohydrolase MazG BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 Gene3D G3DSA:3.40.1010.10 1 119 6.3E-14 T 12-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 Gene3D G3DSA:1.10.287.1080 229 352 1.4E-42 T 12-10-2018 BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 255 328 6.2E-29 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 398 458 1.8E-5 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BEN31_15415 62de14453d07240db35cd38b669e9cfb 494 SUPERFAMILY SSF101386 232 332 6.83E-25 T 12-10-2018 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 130 1.4E-42 T 12-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 SUPERFAMILY SSF69055 290 381 7.46E-31 T 12-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 381 46.488 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 SUPERFAMILY SSF55347 125 262 1.6E-60 T 12-10-2018 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 PIRSF PIRSF006205 1 383 1.5E-161 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 Gene3D G3DSA:3.40.50.720 1 148 5.3E-48 T 12-10-2018 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 Gene3D G3DSA:1.10.1740.10 301 383 4.3E-27 T 12-10-2018 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 SUPERFAMILY SSF51735 2 148 2.82E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 378 8.7E-173 T 12-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 376 2.5E-42 T 12-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN31_08025 047e84d7e01d2f48c1375fccddca6b9b 383 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 2.0E-42 T 12-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 BEN31_06000 70d530b3bfd12fca5ef42335516880f4 168 Gene3D G3DSA:2.102.10.10 43 164 1.2E-22 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN31_06000 70d530b3bfd12fca5ef42335516880f4 168 Pfam PF00355 Rieske [2Fe-2S] domain 81 148 3.0E-12 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BEN31_06000 70d530b3bfd12fca5ef42335516880f4 168 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 9 36 6.3E-6 T 12-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 BEN31_06000 70d530b3bfd12fca5ef42335516880f4 168 SUPERFAMILY SSF50022 5 159 7.33E-30 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN31_14075 11d39c94b1d250fc6a08928dbc753a36 252 Pfam PF08892 YqcI/YcgG family 33 244 5.8E-79 T 12-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG BEN31_02650 add798623643069514eb974b279c4976 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 94 108 3.2E-36 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BEN31_02650 add798623643069514eb974b279c4976 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 171 183 3.2E-36 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BEN31_02650 add798623643069514eb974b279c4976 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 154 168 3.2E-36 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BEN31_02650 add798623643069514eb974b279c4976 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 243 257 3.2E-36 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BEN31_02650 add798623643069514eb974b279c4976 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 263 282 3.2E-36 T 12-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 Gene3D G3DSA:1.20.140.10 241 381 2.8E-25 T 12-10-2018 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 248 362 2.2E-14 T 12-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 SUPERFAMILY SSF47203 236 382 2.09E-23 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 22 98 3.3E-10 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 Gene3D G3DSA:2.40.110.10 136 226 8.4E-21 T 12-10-2018 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 Gene3D G3DSA:1.10.540.10 7 126 1.0E-20 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 PIRSF PIRSF016578 138 386 4.0E-24 T 12-10-2018 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 PIRSF PIRSF016578 4 106 1.9E-8 T 12-10-2018 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 SUPERFAMILY SSF56645 22 226 4.32E-43 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN31_04250 f60a6ab7ea6b7c8521a87044d5d934a9 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 218 6.6E-14 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 Pfam PF08532 Beta-galactosidase trimerisation domain 413 618 2.9E-75 T 12-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 Gene3D G3DSA:3.40.50.880 411 625 1.1E-65 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 PIRSF PIRSF001084 7 688 2.8E-253 T 12-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 Gene3D G3DSA:3.20.20.80 7 408 1.2E-137 T 12-10-2018 BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 Pfam PF08533 Beta-galactosidase C-terminal domain 629 688 2.7E-13 T 12-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 Gene3D G3DSA:2.60.40.1180 627 688 2.8E-18 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 Pfam PF02449 Beta-galactosidase 20 402 7.9E-154 T 12-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 SUPERFAMILY SSF51445 4 382 2.6E-111 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_16380 a40a2c70042e5232a1148db352c4c3e8 688 SUPERFAMILY SSF52317 409 618 4.58E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_17050 51b1da9ec7df542151635d5670f5d790 315 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 38 109 1.3E-9 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17050 51b1da9ec7df542151635d5670f5d790 315 Gene3D G3DSA:1.10.287.90 26 113 2.8E-29 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17050 51b1da9ec7df542151635d5670f5d790 315 SUPERFAMILY SSF81464 18 117 1.42E-23 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17050 51b1da9ec7df542151635d5670f5d790 315 PIRSF PIRSF000292 2 310 1.1E-110 T 12-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 BEN31_17050 51b1da9ec7df542151635d5670f5d790 315 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 11 239 4.0E-126 T 12-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 BEN31_17050 51b1da9ec7df542151635d5670f5d790 315 Gene3D G3DSA:2.60.40.420 114 274 3.0E-41 T 12-10-2018 IPR008972 Cupredoxin BEN31_17050 51b1da9ec7df542151635d5670f5d790 315 SUPERFAMILY SSF49503 123 274 4.62E-42 T 12-10-2018 IPR008972 Cupredoxin BEN31_09305 99af64a70fc9c28acef1605b8be3168b 179 Pfam PF06271 RDD family 19 172 3.8E-26 T 12-10-2018 IPR010432 RDD BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 Gene3D G3DSA:3.40.50.300 12 276 4.4E-111 T 12-10-2018 BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 Gene3D G3DSA:1.10.486.10 386 550 2.7E-135 T 12-10-2018 BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 738 0.0 T 12-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 SUPERFAMILY SSF52540 4 646 8.41E-186 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 Gene3D G3DSA:3.40.50.300 283 637 2.7E-135 T 12-10-2018 BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 Pfam PF13361 UvrD-like helicase C-terminal domain 280 620 2.4E-75 T 12-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 Gene3D G3DSA:1.10.10.160 116 190 4.4E-111 T 12-10-2018 IPR013986 DExx box DNA helicase domain superfamily BEN31_12535 8a6486c90e95ace0ece6cde25644b06b 740 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 8.0E-84 T 12-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 BEN31_05730 35020ac6e55f99712c52d1e923d7afc4 367 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 5 360 3.0E-61 T 12-10-2018 BEN31_14370 efebf920eb61bcf183c6902bc17ee9b1 195 Pfam PF08006 Protein of unknown function (DUF1700) 1 182 1.1E-23 T 12-10-2018 IPR012963 Protein of unknown function DUF1700 BEN31_01825 7a38add3614c2309aceb9c1e12e96427 445 Pfam PF03390 2-hydroxycarboxylate transporter family 29 439 2.8E-160 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 BEN31_01825 7a38add3614c2309aceb9c1e12e96427 445 TIGRFAM TIGR00783 ccs: citrate carrier protein, CCS family 23 440 2.0E-167 T 12-10-2018 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes BEN31_01825 7a38add3614c2309aceb9c1e12e96427 445 PIRSF PIRSF005348 9 445 4.7E-170 T 12-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 BEN31_00475 9da7a7ef0e4c20e5235a58148a15c0f3 376 Gene3D G3DSA:3.40.50.2000 178 309 2.2E-52 T 12-10-2018 BEN31_00475 9da7a7ef0e4c20e5235a58148a15c0f3 376 SUPERFAMILY SSF53756 6 310 2.59E-59 T 12-10-2018 BEN31_00475 9da7a7ef0e4c20e5235a58148a15c0f3 376 Pfam PF00534 Glycosyl transferases group 1 193 310 7.3E-26 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BEN31_00475 9da7a7ef0e4c20e5235a58148a15c0f3 376 Gene3D G3DSA:3.40.50.2000 17 177 2.2E-52 T 12-10-2018 BEN31_00475 9da7a7ef0e4c20e5235a58148a15c0f3 376 Pfam PF13439 Glycosyltransferase Family 4 17 181 1.0E-16 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN31_17495 57b878c2902a54fedacb5e61108546d4 212 ProSitePatterns PS00958 Transaldolase active site. 81 98 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BEN31_17495 57b878c2902a54fedacb5e61108546d4 212 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 202 3.3E-55 T 12-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BEN31_17495 57b878c2902a54fedacb5e61108546d4 212 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 3.6E-106 T 12-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BEN31_17495 57b878c2902a54fedacb5e61108546d4 212 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 12-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 BEN31_17495 57b878c2902a54fedacb5e61108546d4 212 Gene3D G3DSA:3.20.20.70 1 212 8.3E-91 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_17495 57b878c2902a54fedacb5e61108546d4 212 Hamap MF_00494 Probable transaldolase [tal]. 1 211 45.776 T 12-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 BEN31_17495 57b878c2902a54fedacb5e61108546d4 212 SUPERFAMILY SSF51569 1 212 4.08E-74 T 12-10-2018 BEN31_05265 c067e174ef5a46682f7593a9d32fe330 254 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 57 70 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site BEN31_05265 c067e174ef5a46682f7593a9d32fe330 254 Gene3D G3DSA:3.40.190.10 119 213 9.5E-64 T 12-10-2018 BEN31_05265 c067e174ef5a46682f7593a9d32fe330 254 SMART SM00079 35 252 5.3E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BEN31_05265 c067e174ef5a46682f7593a9d32fe330 254 Gene3D G3DSA:3.40.190.10 39 249 9.5E-64 T 12-10-2018 BEN31_05265 c067e174ef5a46682f7593a9d32fe330 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 251 5.3E-57 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_05265 c067e174ef5a46682f7593a9d32fe330 254 SUPERFAMILY SSF53850 1 251 3.34E-68 T 12-10-2018 BEN31_05265 c067e174ef5a46682f7593a9d32fe330 254 SMART SM00062 35 253 4.1E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_08455 08e6ab8211ba5a89c1ad2e3f31597da8 67 Pfam PF01192 RNA polymerase Rpb6 9 61 1.5E-11 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN31_08455 08e6ab8211ba5a89c1ad2e3f31597da8 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 14.304 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_08455 08e6ab8211ba5a89c1ad2e3f31597da8 67 SMART SM01409 8 61 6.3E-12 T 12-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN31_08455 08e6ab8211ba5a89c1ad2e3f31597da8 67 SUPERFAMILY SSF63562 1 66 1.92E-21 T 12-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN31_08455 08e6ab8211ba5a89c1ad2e3f31597da8 67 Gene3D G3DSA:3.90.940.10 1 67 8.0E-17 T 12-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 BEN31_08455 08e6ab8211ba5a89c1ad2e3f31597da8 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 7.6E-25 T 12-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 PRINTS PR01035 Tetracycline resistance protein signature 249 269 2.7E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 PRINTS PR01035 Tetracycline resistance protein signature 159 179 2.7E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 PRINTS PR01035 Tetracycline resistance protein signature 337 360 2.7E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 PRINTS PR01035 Tetracycline resistance protein signature 131 153 2.7E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 PRINTS PR01035 Tetracycline resistance protein signature 73 97 2.7E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 PRINTS PR01035 Tetracycline resistance protein signature 16 32 2.7E-23 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 SUPERFAMILY SSF103473 7 391 3.14E-71 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 Gene3D G3DSA:1.20.1250.20 2 385 4.2E-76 T 12-10-2018 BEN31_01460 66be41399370c3f3e641b23ee505a8df 396 Pfam PF07690 Major Facilitator Superfamily 10 353 1.1E-54 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_05040 2122937594db5b766261944d4d94312a 291 SUPERFAMILY SSF52151 6 287 1.28E-42 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_05040 2122937594db5b766261944d4d94312a 291 Pfam PF01734 Patatin-like phospholipase 6 195 5.4E-32 T 12-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 BEN31_05040 2122937594db5b766261944d4d94312a 291 Gene3D G3DSA:3.40.1090.10 1 117 2.9E-24 T 12-10-2018 BEN31_05040 2122937594db5b766261944d4d94312a 291 Gene3D G3DSA:3.40.1090.10 118 289 7.9E-21 T 12-10-2018 BEN31_08705 f5e50c1457866362af274456c81a2da9 259 Pfam PF08478 POTRA domain, FtsQ-type 54 123 6.5E-18 T 12-10-2018 IPR013685 POTRA domain, FtsQ-type BEN31_08705 f5e50c1457866362af274456c81a2da9 259 Gene3D G3DSA:3.40.50.10960 122 236 1.8E-36 T 12-10-2018 BEN31_08705 f5e50c1457866362af274456c81a2da9 259 Hamap MF_00912 Cell division protein DivIB [divIB]. 13 253 29.734 T 12-10-2018 IPR026580 Cell division protein DivIB BEN31_08705 f5e50c1457866362af274456c81a2da9 259 Gene3D G3DSA:3.10.20.310 54 121 3.5E-6 T 12-10-2018 BEN31_04950 47f6bcdce94f5faa65d6fd2595686631 148 SUPERFAMILY SSF54523 11 115 1.33E-6 T 12-10-2018 BEN31_04950 47f6bcdce94f5faa65d6fd2595686631 148 PIRSF PIRSF021292 5 148 4.7E-30 T 12-10-2018 IPR016785 ComG operon protein 4 GO:0030420 BEN31_10925 48c82ac3bb37cfeec80ae4dfab953c69 142 SUPERFAMILY SSF54197 2 135 7.11E-46 T 12-10-2018 IPR036265 HIT-like superfamily BEN31_10925 48c82ac3bb37cfeec80ae4dfab953c69 142 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 12-10-2018 IPR019808 Histidine triad, conserved site BEN31_10925 48c82ac3bb37cfeec80ae4dfab953c69 142 Pfam PF01230 HIT domain 13 106 3.6E-28 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BEN31_10925 48c82ac3bb37cfeec80ae4dfab953c69 142 Gene3D G3DSA:3.30.428.10 2 142 3.9E-51 T 12-10-2018 IPR036265 HIT-like superfamily BEN31_10925 48c82ac3bb37cfeec80ae4dfab953c69 142 PRINTS PR00332 Histidine triad family signature 93 103 1.5E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BEN31_10925 48c82ac3bb37cfeec80ae4dfab953c69 142 PRINTS PR00332 Histidine triad family signature 5 21 1.5E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BEN31_10925 48c82ac3bb37cfeec80ae4dfab953c69 142 PRINTS PR00332 Histidine triad family signature 26 44 1.5E-17 T 12-10-2018 IPR001310 Histidine triad (HIT) protein BEN31_09470 ab5721a691338574d16decafe59d4578 501 Gene3D G3DSA:1.10.287.130 268 344 3.7E-18 T 12-10-2018 BEN31_09470 ab5721a691338574d16decafe59d4578 501 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 396 497 1.1E-23 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09470 ab5721a691338574d16decafe59d4578 501 Gene3D G3DSA:3.30.450.20 77 175 9.4E-60 T 12-10-2018 BEN31_09470 ab5721a691338574d16decafe59d4578 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 458 1.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09470 ab5721a691338574d16decafe59d4578 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 1.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09470 ab5721a691338574d16decafe59d4578 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 1.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09470 ab5721a691338574d16decafe59d4578 501 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 1.5E-17 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09470 ab5721a691338574d16decafe59d4578 501 Gene3D G3DSA:3.30.450.20 48 226 9.4E-60 T 12-10-2018 BEN31_09470 ab5721a691338574d16decafe59d4578 501 SMART SM00388 285 350 3.3E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09470 ab5721a691338574d16decafe59d4578 501 Gene3D G3DSA:3.30.565.10 345 497 6.7E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09470 ab5721a691338574d16decafe59d4578 501 SMART SM00387 393 499 5.8E-29 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09470 ab5721a691338574d16decafe59d4578 501 SUPERFAMILY SSF55874 353 496 9.56E-37 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09470 ab5721a691338574d16decafe59d4578 501 SUPERFAMILY SSF47384 273 350 3.92E-14 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_09470 ab5721a691338574d16decafe59d4578 501 Pfam PF02743 Cache domain 47 210 1.9E-21 T 12-10-2018 IPR033479 Double Cache domain 1 BEN31_09470 ab5721a691338574d16decafe59d4578 501 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 348 6.3E-16 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09470 ab5721a691338574d16decafe59d4578 501 SUPERFAMILY SSF103190 66 183 3.14E-11 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_13305 b07babc5caaf5ebbc7d94a6f92677ee6 199 Gene3D G3DSA:3.60.40.10 1 198 1.2E-44 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13305 b07babc5caaf5ebbc7d94a6f92677ee6 199 SUPERFAMILY SSF81606 19 195 3.14E-14 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13305 b07babc5caaf5ebbc7d94a6f92677ee6 199 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 35 158 2.1E-12 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13305 b07babc5caaf5ebbc7d94a6f92677ee6 199 SMART SM00332 6 196 0.0086 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_13305 b07babc5caaf5ebbc7d94a6f92677ee6 199 SMART SM00331 9 198 2.8E-40 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_10005 3eeea465748ed48b8bf92f03f6ef61d9 298 Pfam PF01636 Phosphotransferase enzyme family 23 261 3.5E-25 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BEN31_10005 3eeea465748ed48b8bf92f03f6ef61d9 298 Gene3D G3DSA:3.30.200.20 2 94 1.6E-7 T 12-10-2018 BEN31_10005 3eeea465748ed48b8bf92f03f6ef61d9 298 Gene3D G3DSA:3.90.1200.10 108 297 2.3E-20 T 12-10-2018 BEN31_10005 3eeea465748ed48b8bf92f03f6ef61d9 298 SUPERFAMILY SSF56112 9 258 1.7E-28 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_11575 f2a9c11751abf18725b1ccfc5dfc2def 115 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 1 113 3.0E-54 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 BEN31_11575 f2a9c11751abf18725b1ccfc5dfc2def 115 Hamap MF_01502 UPF0295 protein . 1 115 36.234 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 BEN31_11575 f2a9c11751abf18725b1ccfc5dfc2def 115 Pfam PF11023 Zinc-ribbon containing domain 3 113 1.0E-58 T 12-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 BEN31_12890 fc89dac782baa5d20c95f8d67c769c95 64 Pfam PF14146 Domain of unknown function (DUF4305) 17 52 6.1E-15 T 12-10-2018 IPR025426 Protein of unknown function DUF4305 BEN31_12890 fc89dac782baa5d20c95f8d67c769c95 64 ProDom PD053380 YDIK LIPOPROTEIN TRANSMEMBRANE MEMBRANE PRECURSOR PALMITATE SIGNAL 1 63 4.0E-23 T 12-10-2018 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 Pfam PF02378 Phosphotransferase system, EIIC 109 386 1.1E-33 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 SUPERFAMILY SSF51261 467 616 8.55E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 534 546 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 Gene3D G3DSA:2.70.70.10 459 618 5.7E-56 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 Gene3D G3DSA:3.30.1360.60 1 76 2.8E-27 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 471 595 5.2E-50 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 Pfam PF00367 phosphotransferase system, EIIB 8 41 6.6E-15 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 SUPERFAMILY SSF55604 6 78 5.89E-22 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 4 616 3.6E-224 T 12-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_16600 9081cd1d8621a10700582d68827ca89f 635 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 473 592 2.1E-46 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_04990 063ce845a963bcd8426661b22363b5c2 266 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 11 44 3.8E-10 T 12-10-2018 IPR023833 Signal peptide, camelysin BEN31_04990 063ce845a963bcd8426661b22363b5c2 266 Pfam PF12389 Camelysin metallo-endopeptidase 4 239 1.9E-34 T 12-10-2018 IPR022121 Peptidase M73, camelysin BEN31_03885 746c1333d200795f7338207778622c9c 586 Gene3D G3DSA:3.20.20.540 179 492 4.3E-157 T 12-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN31_03885 746c1333d200795f7338207778622c9c 586 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 135 561 100.16 T 12-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN31_03885 746c1333d200795f7338207778622c9c 586 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 135 559 8.4E-225 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN31_03885 746c1333d200795f7338207778622c9c 586 Pfam PF01964 Radical SAM ThiC family 136 556 3.4E-206 T 12-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN31_03885 746c1333d200795f7338207778622c9c 586 Pfam PF13667 ThiC-associated domain 17 93 6.2E-31 T 12-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 BEN31_08620 c1f2cf38a1f98a6c1b7447f1d68b92cb 78 SUPERFAMILY SSF50346 1 74 4.45E-14 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BEN31_08620 c1f2cf38a1f98a6c1b7447f1d68b92cb 78 Pfam PF05239 PRC-barrel domain 2 75 3.9E-14 T 12-10-2018 IPR027275 PRC-barrel domain BEN31_08620 c1f2cf38a1f98a6c1b7447f1d68b92cb 78 Gene3D G3DSA:2.30.30.240 1 76 7.5E-14 T 12-10-2018 BEN31_08620 c1f2cf38a1f98a6c1b7447f1d68b92cb 78 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 4 75 2.8E-26 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH BEN31_02445 70673ea57138a19d63c7054972f23cb0 272 SUPERFAMILY SSF52096 5 267 6.83E-79 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_02445 70673ea57138a19d63c7054972f23cb0 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 1.4E-130 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BEN31_02445 70673ea57138a19d63c7054972f23cb0 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BEN31_02445 70673ea57138a19d63c7054972f23cb0 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 55.842 T 12-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 BEN31_02445 70673ea57138a19d63c7054972f23cb0 272 Gene3D G3DSA:3.90.226.10 1 209 6.9E-79 T 12-10-2018 BEN31_02445 70673ea57138a19d63c7054972f23cb0 272 Gene3D G3DSA:1.10.12.10 210 260 2.8E-28 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BEN31_02445 70673ea57138a19d63c7054972f23cb0 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 2.2E-91 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 Gene3D G3DSA:1.20.59.30 258 344 1.1E-26 T 12-10-2018 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 Gene3D G3DSA:3.40.50.620 32 176 2.5E-67 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 Pfam PF01171 PP-loop family 34 216 2.7E-58 T 12-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 Pfam PF11734 TilS substrate C-terminal domain 401 458 9.8E-16 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 18 332 23.611 T 12-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 SMART SM00977 400 473 2.8E-27 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 SUPERFAMILY SSF82829 227 337 8.63E-11 T 12-10-2018 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 400 446 2.8E-22 T 12-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 34 220 6.9E-60 T 12-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 SUPERFAMILY SSF56037 361 458 3.66E-19 T 12-10-2018 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 Gene3D G3DSA:1.10.10.1360 138 222 2.5E-67 T 12-10-2018 BEN31_15360 7d6f135ce515c78a9b3e73d96e06917d 481 SUPERFAMILY SSF52402 22 248 7.94E-54 T 12-10-2018 BEN31_00410 5bdfa64cc3ffc24ac99a364524b2b968 256 SMART SM00382 37 222 3.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_00410 5bdfa64cc3ffc24ac99a364524b2b968 256 SUPERFAMILY SSF52540 23 237 1.54E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00410 5bdfa64cc3ffc24ac99a364524b2b968 256 Pfam PF00005 ABC transporter 29 172 1.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00410 5bdfa64cc3ffc24ac99a364524b2b968 256 Gene3D G3DSA:3.40.50.300 15 256 3.3E-70 T 12-10-2018 BEN31_00410 5bdfa64cc3ffc24ac99a364524b2b968 256 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_04240 c28b05df32e03f083e2e14cd4679cd50 286 Gene3D G3DSA:3.40.190.10 105 226 5.1E-45 T 12-10-2018 BEN31_04240 c28b05df32e03f083e2e14cd4679cd50 286 SUPERFAMILY SSF53850 34 267 2.05E-35 T 12-10-2018 BEN31_04240 c28b05df32e03f083e2e14cd4679cd50 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 262 3.3E-32 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_04240 c28b05df32e03f083e2e14cd4679cd50 286 Gene3D G3DSA:3.40.190.10 45 262 5.1E-45 T 12-10-2018 BEN31_04240 c28b05df32e03f083e2e14cd4679cd50 286 SMART SM00062 35 264 1.2E-13 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 SUPERFAMILY SSF52440 1 113 2.3E-47 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 SUPERFAMILY SSF51246 332 441 3.51E-37 T 12-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 SMART SM00878 336 441 3.9E-50 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 Gene3D G3DSA:3.40.50.20 1 85 6.0E-36 T 12-10-2018 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 SUPERFAMILY SSF56059 83 351 6.19E-66 T 12-10-2018 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 440 2.6E-34 T 12-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.0E-72 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 Gene3D G3DSA:3.30.470.20 87 440 4.8E-148 T 12-10-2018 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.7E-45 T 12-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_06995 84d6bc3186803e6a551580f2f6681c91 449 Gene3D G3DSA:3.30.1490.20 131 202 4.8E-148 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_13285 6f3560d2e9cee981a818c46e9fd65db6 345 SUPERFAMILY SSF52518 2 216 3.93E-64 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_13285 6f3560d2e9cee981a818c46e9fd65db6 345 Pfam PF02779 Transketolase, pyrimidine binding domain 4 191 3.4E-54 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_13285 6f3560d2e9cee981a818c46e9fd65db6 345 Gene3D G3DSA:3.40.50.920 205 337 2.9E-48 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_13285 6f3560d2e9cee981a818c46e9fd65db6 345 SUPERFAMILY SSF52922 201 337 3.66E-43 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_13285 6f3560d2e9cee981a818c46e9fd65db6 345 SMART SM00861 5 192 3.8E-59 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_13285 6f3560d2e9cee981a818c46e9fd65db6 345 Pfam PF02780 Transketolase, C-terminal domain 206 328 2.9E-43 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BEN31_13285 6f3560d2e9cee981a818c46e9fd65db6 345 Gene3D G3DSA:3.40.50.970 3 204 4.5E-80 T 12-10-2018 BEN31_00830 b40cd3e7eb7b4cd3bdcfa1fa4a9725fc 167 Pfam PF05119 Phage terminase, small subunit 50 152 3.0E-18 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BEN31_00830 b40cd3e7eb7b4cd3bdcfa1fa4a9725fc 167 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 40 163 1.3E-34 T 12-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BEN31_00760 536a0b6cfa9319818279db49c74569a5 273 Gene3D G3DSA:3.40.50.300 46 258 7.6E-37 T 12-10-2018 BEN31_00760 536a0b6cfa9319818279db49c74569a5 273 Pfam PF01695 IstB-like ATP binding protein 79 241 3.6E-8 T 12-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 BEN31_00760 536a0b6cfa9319818279db49c74569a5 273 SUPERFAMILY SSF52540 80 258 1.61E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00760 536a0b6cfa9319818279db49c74569a5 273 SMART SM00382 111 262 0.0012 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_05045 398b8e0f273160a94d9e92cb65e64f2a 131 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 5 131 8.0E-38 T 12-10-2018 BEN31_13720 cabbd890daa52dc83438fe8aae4189b0 464 Pfam PF00171 Aldehyde dehydrogenase family 3 458 3.1E-172 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_13720 cabbd890daa52dc83438fe8aae4189b0 464 Gene3D G3DSA:3.40.309.10 235 427 1.0E-178 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_13720 cabbd890daa52dc83438fe8aae4189b0 464 PIRSF PIRSF036492 14 460 7.1E-84 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BEN31_13720 cabbd890daa52dc83438fe8aae4189b0 464 SUPERFAMILY SSF53720 5 461 2.62E-170 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_13720 cabbd890daa52dc83438fe8aae4189b0 464 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 7 456 2.2E-213 T 12-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 BEN31_13720 cabbd890daa52dc83438fe8aae4189b0 464 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN31_13720 cabbd890daa52dc83438fe8aae4189b0 464 Gene3D G3DSA:3.40.605.10 5 456 1.0E-178 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_03760 69641b2670237e9da1c0ac6f2ca2833e 239 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 9 88 6.2E-27 T 12-10-2018 IPR010627 Peptidase A24A, N-terminal BEN31_03760 69641b2670237e9da1c0ac6f2ca2833e 239 Pfam PF01478 Type IV leader peptidase family 101 204 4.0E-14 T 12-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Pfam PF00512 His Kinase A (phospho-acceptor) domain 513 573 4.5E-14 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SUPERFAMILY SSF55785 253 364 1.68E-19 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SMART SM00387 617 724 3.2E-31 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Gene3D G3DSA:3.30.450.20 385 499 9.1E-19 T 12-10-2018 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SUPERFAMILY SSF47384 506 573 6.67E-12 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Gene3D G3DSA:3.30.565.10 577 731 3.1E-45 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Pfam PF13426 PAS domain 158 255 1.2E-5 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Pfam PF13426 PAS domain 37 133 1.9E-8 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 384 502 3.1E-13 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 145 263 6.1E-12 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 383 2.0E-12 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Pfam PF13188 PAS domain 389 430 3.5E-8 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Gene3D G3DSA:3.30.450.20 269 384 3.8E-18 T 12-10-2018 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Gene3D G3DSA:3.30.450.20 143 268 1.4E-15 T 12-10-2018 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SUPERFAMILY SSF55874 569 724 1.44E-39 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_09520 050042f72990b57824a58d5d045bbe54 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 708 721 2.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 702 2.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 673 683 2.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 669 2.3E-15 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Gene3D G3DSA:1.10.287.130 500 574 1.7E-15 T 12-10-2018 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Pfam PF00989 PAS fold 268 365 1.1E-10 T 12-10-2018 IPR013767 PAS fold GO:0006355 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Gene3D G3DSA:3.30.450.20 26 134 3.9E-14 T 12-10-2018 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SUPERFAMILY SSF55785 12 133 1.68E-13 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SMART SM00388 511 575 1.1E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SUPERFAMILY SSF55785 373 494 9.98E-18 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SMART SM00091 268 333 3.5E-9 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SMART SM00091 388 454 4.3E-6 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SMART SM00091 26 92 0.0042 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SMART SM00091 147 213 3.9E-6 T 12-10-2018 IPR000014 PAS domain BEN31_09520 050042f72990b57824a58d5d045bbe54 731 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 619 723 2.3E-24 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_09520 050042f72990b57824a58d5d045bbe54 731 SUPERFAMILY SSF55785 132 254 5.93E-15 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_03420 2219782c14581b314c179bd21e348579 292 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 292 31.652 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 BEN31_03420 2219782c14581b314c179bd21e348579 292 Pfam PF01351 Ribonuclease HII 81 285 5.9E-55 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain BEN31_03420 2219782c14581b314c179bd21e348579 292 Gene3D G3DSA:3.30.420.10 78 291 3.5E-78 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_03420 2219782c14581b314c179bd21e348579 292 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 2 284 5.3E-104 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 BEN31_03420 2219782c14581b314c179bd21e348579 292 Gene3D G3DSA:3.30.310.10 1 71 7.4E-23 T 12-10-2018 IPR012295 TBP domain superfamily BEN31_03420 2219782c14581b314c179bd21e348579 292 Pfam PF11858 Domain of unknown function (DUF3378) 1 62 3.0E-23 T 12-10-2018 IPR024568 Ribonuclease HIII, N-terminal BEN31_03420 2219782c14581b314c179bd21e348579 292 PIRSF PIRSF037748 1 292 3.5E-114 T 12-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 BEN31_03420 2219782c14581b314c179bd21e348579 292 SUPERFAMILY SSF53098 79 290 1.15E-48 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 SUPERFAMILY SSF56024 289 483 4.04E-44 T 12-10-2018 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 Hamap MF_01916 Cardiolipin synthase. 34 500 39.303 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 Pfam PF13091 PLD-like domain 342 467 1.1E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 Pfam PF13091 PLD-like domain 155 297 1.7E-15 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 SUPERFAMILY SSF56024 131 331 6.59E-51 T 12-10-2018 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 SMART SM00155 413 440 8.4E-7 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 SMART SM00155 237 264 6.1E-6 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 29 500 1.0E-140 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 Gene3D G3DSA:3.30.870.10 320 472 2.2E-29 T 12-10-2018 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 Gene3D G3DSA:3.30.870.10 127 319 2.1E-42 T 12-10-2018 BEN31_17410 3348eff33fb19cea23dad08c0ddd66b3 500 Pfam PF13396 Phospholipase_D-nuclease N-terminal 41 82 3.9E-7 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal BEN31_08420 89c204cf66c3a6e7d0d29f9d3f4d22cc 256 SUPERFAMILY SSF81606 2 245 2.09E-66 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_08420 89c204cf66c3a6e7d0d29f9d3f4d22cc 256 Gene3D G3DSA:3.60.40.10 1 248 3.9E-75 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_08420 89c204cf66c3a6e7d0d29f9d3f4d22cc 256 Pfam PF13672 Protein phosphatase 2C 14 222 2.3E-22 T 12-10-2018 BEN31_08420 89c204cf66c3a6e7d0d29f9d3f4d22cc 256 SMART SM00332 1 243 2.7E-30 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_08420 89c204cf66c3a6e7d0d29f9d3f4d22cc 256 SMART SM00331 9 245 5.7E-62 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_17200 688200c139f871a07b8f1fd6518a4fed 291 SUPERFAMILY SSF55729 108 283 5.15E-25 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_17200 688200c139f871a07b8f1fd6518a4fed 291 Pfam PF13673 Acetyltransferase (GNAT) domain 181 277 2.4E-13 T 12-10-2018 IPR000182 GNAT domain BEN31_17200 688200c139f871a07b8f1fd6518a4fed 291 Gene3D G3DSA:3.40.630.30 37 283 3.2E-37 T 12-10-2018 BEN31_06535 1724b0e2413c1ddee9c435865cdaa011 110 Pfam PF01638 HxlR-like helix-turn-helix 15 104 1.4E-33 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_06535 1724b0e2413c1ddee9c435865cdaa011 110 SUPERFAMILY SSF46785 5 106 3.24E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06535 1724b0e2413c1ddee9c435865cdaa011 110 Gene3D G3DSA:1.10.10.10 3 109 7.0E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16925 01e52ded5a9004e36d7b56d175295abe 210 SMART SM00954 57 180 2.0E-45 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN31_16925 01e52ded5a9004e36d7b56d175295abe 210 Gene3D G3DSA:1.10.287.860 163 210 5.1E-19 T 12-10-2018 BEN31_16925 01e52ded5a9004e36d7b56d175295abe 210 SUPERFAMILY SSF81301 18 209 1.49E-56 T 12-10-2018 BEN31_16925 01e52ded5a9004e36d7b56d175295abe 210 Gene3D G3DSA:3.30.460.10 12 161 7.5E-52 T 12-10-2018 BEN31_16925 01e52ded5a9004e36d7b56d175295abe 210 Pfam PF04607 Region found in RelA / SpoT proteins 57 178 5.6E-38 T 12-10-2018 IPR007685 RelA/SpoT GO:0015969 BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 Gene3D G3DSA:1.10.10.10 1 85 2.0E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 Gene3D G3DSA:3.30.450.40 104 336 2.8E-60 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 PIRSF PIRSF005485 1 341 5.9E-125 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 Gene3D G3DSA:3.30.390.60 128 230 2.8E-60 T 12-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 SUPERFAMILY SSF55781 71 340 3.73E-71 T 12-10-2018 BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 336 3.1E-115 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 Pfam PF01628 HrcA protein C terminal domain 104 323 9.1E-67 T 12-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 33.799 T 12-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 BEN31_04555 60c2ffe01908d2b4995637b3d20a3e84 343 SUPERFAMILY SSF46785 1 84 4.21E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 SMART SM00840 353 417 4.0E-17 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 39.434 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 Gene3D G3DSA:3.40.50.620 1 305 1.3E-136 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.6E-29 T 12-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 SUPERFAMILY SSF52374 4 312 8.58E-105 T 12-10-2018 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 SUPERFAMILY SSF47323 340 464 1.09E-36 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 464 1.6E-194 T 12-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 Pfam PF09190 DALR domain 354 412 1.4E-16 T 12-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 2.0E-136 T 12-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 BEN31_15150 4f7726aa05618d977ea65f17dd946799 466 Gene3D G3DSA:1.20.120.1910 306 465 5.8E-38 T 12-10-2018 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 48 106 2.5E-6 T 12-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 SUPERFAMILY SSF46626 259 353 1.81E-17 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 SUPERFAMILY SSF81464 14 114 5.07E-17 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 SUPERFAMILY SSF49503 127 280 2.3E-37 T 12-10-2018 IPR008972 Cupredoxin BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 Gene3D G3DSA:2.60.40.2600 127 355 4.8E-62 T 12-10-2018 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 174 228 - T 12-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 Pfam PF00034 Cytochrome c 261 353 5.1E-12 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 Gene3D G3DSA:1.10.287.90 25 115 1.0E-20 T 12-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 154 234 1.5E-11 T 12-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 116 6.4E-5 T 12-10-2018 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 84 96 6.4E-5 T 12-10-2018 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 217 234 6.4E-5 T 12-10-2018 BEN31_08885 25e20a0f84ee6c4aa21d0d044d408d8c 355 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 33 244 4.5E-48 T 12-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_18625 e52b3d5f8c2d1b04b24ac29ac0a75f2e 295 Gene3D G3DSA:3.40.50.300 2 175 4.3E-5 T 12-10-2018 BEN31_18625 e52b3d5f8c2d1b04b24ac29ac0a75f2e 295 SUPERFAMILY SSF52540 11 167 2.17E-12 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_18625 e52b3d5f8c2d1b04b24ac29ac0a75f2e 295 PIRSF PIRSF005052 9 294 1.1E-109 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 BEN31_18625 e52b3d5f8c2d1b04b24ac29ac0a75f2e 295 Pfam PF03668 P-loop ATPase protein family 9 292 1.0E-136 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 BEN31_18625 e52b3d5f8c2d1b04b24ac29ac0a75f2e 295 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 291 41.981 T 12-10-2018 IPR005337 RapZ-like family GO:0005524 BEN31_03665 c587f21c19324d90660b1df057d8949c 199 Gene3D G3DSA:3.20.19.10 1 174 2.5E-73 T 12-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 BEN31_03665 c587f21c19324d90660b1df057d8949c 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 3.2E-93 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BEN31_03665 c587f21c19324d90660b1df057d8949c 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 197 42.007 T 12-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 BEN31_03665 c587f21c19324d90660b1df057d8949c 199 SUPERFAMILY SSF52016 2 196 2.94E-57 T 12-10-2018 BEN31_03665 c587f21c19324d90660b1df057d8949c 199 Pfam PF00694 Aconitase C-terminal domain 1 122 6.7E-34 T 12-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 BEN31_05630 c1002ca5b54c05d6a8c043e219af52e0 77 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 75 1.9E-25 T 12-10-2018 IPR018680 Protein of unknown function DUF2164 BEN31_01860 ffb022e7b1fadc470466643a0746ac36 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 184 1.0E-45 T 12-10-2018 IPR035289 Protein of unknown function DUF5366 BEN31_01860 ffb022e7b1fadc470466643a0746ac36 185 Pfam PF17328 Family of unknown function (DUF5366) 29 184 1.2E-61 T 12-10-2018 IPR035289 Protein of unknown function DUF5366 BEN31_04830 ad8197390429bb9bc437da12cad1bcf9 294 Gene3D G3DSA:1.10.3720.10 57 289 1.4E-35 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04830 ad8197390429bb9bc437da12cad1bcf9 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 292 3.1E-53 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_04830 ad8197390429bb9bc437da12cad1bcf9 294 SUPERFAMILY SSF161098 19 278 1.96E-40 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04830 ad8197390429bb9bc437da12cad1bcf9 294 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 285 1.1E-82 T 12-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 BEN31_18515 48f4f3e7a76193d0871d813a493df29f 241 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 12-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BEN31_18515 48f4f3e7a76193d0871d813a493df29f 241 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 227 7.5E-21 T 12-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 BEN31_18515 48f4f3e7a76193d0871d813a493df29f 241 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 42.673 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BEN31_18515 48f4f3e7a76193d0871d813a493df29f 241 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 239 2.8E-94 T 12-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 BEN31_18515 48f4f3e7a76193d0871d813a493df29f 241 Gene3D G3DSA:3.40.50.1360 1 241 7.6E-98 T 12-10-2018 BEN31_18515 48f4f3e7a76193d0871d813a493df29f 241 SUPERFAMILY SSF100950 1 238 1.35E-91 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_17530 252e726214b24cedfd1c06b362167c96 318 Pfam PF03547 Membrane transport protein 165 314 3.9E-22 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BEN31_17530 252e726214b24cedfd1c06b362167c96 318 Pfam PF03547 Membrane transport protein 7 158 2.4E-23 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BEN31_04450 bcedd94d87820049b8e39f2f43caf8b2 46 Pfam PF08970 Sporulation inhibitor A 1 44 4.8E-24 T 12-10-2018 IPR015064 Sporulation inhibitor A BEN31_04450 bcedd94d87820049b8e39f2f43caf8b2 46 SUPERFAMILY SSF100985 1 44 4.71E-17 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily BEN31_04450 bcedd94d87820049b8e39f2f43caf8b2 46 Gene3D G3DSA:1.10.287.1100 4 37 5.8E-20 T 12-10-2018 IPR036916 Sporulation inhibitor A superfamily BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 SUPERFAMILY SSF50129 1 178 3.93E-48 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 137 6.9E-26 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 Gene3D G3DSA:3.90.180.10 9 326 1.4E-98 T 12-10-2018 BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 SUPERFAMILY SSF51735 143 309 9.2E-39 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 Gene3D G3DSA:3.40.50.720 156 291 1.4E-98 T 12-10-2018 BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 Pfam PF00107 Zinc-binding dehydrogenase 179 304 2.7E-25 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_04220 dda7f28376f5413a7b61ac8728537115 346 SMART SM00829 7 343 6.0E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 SUPERFAMILY SSF54631 97 223 5.12E-22 T 12-10-2018 BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 Gene3D G3DSA:3.10.580.10 84 232 1.1E-61 T 12-10-2018 BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 Pfam PF08279 HTH domain 29 81 8.0E-13 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 SMART SM00116 106 154 0.086 T 12-10-2018 IPR000644 CBS domain BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 SMART SM00116 173 224 0.053 T 12-10-2018 IPR000644 CBS domain BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 SUPERFAMILY SSF46785 25 100 8.49E-14 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 Gene3D G3DSA:1.10.10.10 10 83 6.3E-9 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 PIRSF PIRSF026546 24 230 3.4E-102 T 12-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 Pfam PF00571 CBS domain 167 223 7.6E-5 T 12-10-2018 IPR000644 CBS domain BEN31_04680 92797bbcb13a7bb0bcc8cca9a9241d72 232 Pfam PF00571 CBS domain 100 153 4.2E-6 T 12-10-2018 IPR000644 CBS domain BEN31_12315 460822d43d1abf57de24540ac627ee55 302 Gene3D G3DSA:3.40.190.10 165 268 1.4E-35 T 12-10-2018 BEN31_12315 460822d43d1abf57de24540ac627ee55 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_12315 460822d43d1abf57de24540ac627ee55 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_12315 460822d43d1abf57de24540ac627ee55 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_12315 460822d43d1abf57de24540ac627ee55 302 SUPERFAMILY SSF46785 2 111 2.03E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_12315 460822d43d1abf57de24540ac627ee55 302 Gene3D G3DSA:1.10.10.10 1 92 7.4E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12315 460822d43d1abf57de24540ac627ee55 302 Gene3D G3DSA:3.40.190.10 93 277 1.4E-35 T 12-10-2018 BEN31_12315 460822d43d1abf57de24540ac627ee55 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_12315 460822d43d1abf57de24540ac627ee55 302 SUPERFAMILY SSF53850 88 278 1.19E-32 T 12-10-2018 BEN31_12315 460822d43d1abf57de24540ac627ee55 302 Pfam PF03466 LysR substrate binding domain 87 289 6.9E-35 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_06625 30bc69bb81a43a8abf5158b278469c93 494 Pfam PF00171 Aldehyde dehydrogenase family 29 488 1.7E-194 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_06625 30bc69bb81a43a8abf5158b278469c93 494 Gene3D G3DSA:3.40.309.10 269 458 1.7E-204 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_06625 30bc69bb81a43a8abf5158b278469c93 494 PIRSF PIRSF036492 31 493 1.9E-83 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BEN31_06625 30bc69bb81a43a8abf5158b278469c93 494 SUPERFAMILY SSF53720 16 492 9.03E-187 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_06625 30bc69bb81a43a8abf5158b278469c93 494 Gene3D G3DSA:3.40.605.10 24 486 1.7E-204 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_06625 30bc69bb81a43a8abf5158b278469c93 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN31_04710 d354ca9149f497c49c76039d1860d776 238 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 232 3.6E-72 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 BEN31_04710 d354ca9149f497c49c76039d1860d776 238 SUPERFAMILY SSF53335 12 120 2.03E-6 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_04710 d354ca9149f497c49c76039d1860d776 238 PIRSF PIRSF018637 4 238 1.1E-87 T 12-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 BEN31_04710 d354ca9149f497c49c76039d1860d776 238 Gene3D G3DSA:3.40.50.150 1 164 8.2E-55 T 12-10-2018 BEN31_15755 290eaba13aea2729afe081779f9481b6 370 Gene3D G3DSA:1.20.1050.90 119 311 1.9E-109 T 12-10-2018 BEN31_15755 290eaba13aea2729afe081779f9481b6 370 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 370 104.588 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BEN31_15755 290eaba13aea2729afe081779f9481b6 370 SUPERFAMILY SSF52540 1 353 1.11E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15755 290eaba13aea2729afe081779f9481b6 370 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BEN31_15755 290eaba13aea2729afe081779f9481b6 370 Gene3D G3DSA:3.40.50.300 6 345 1.9E-109 T 12-10-2018 BEN31_15755 290eaba13aea2729afe081779f9481b6 370 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 366 1.4E-138 T 12-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 BEN31_15755 290eaba13aea2729afe081779f9481b6 370 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 353 1.3E-17 T 12-10-2018 IPR003395 RecF/RecN/SMC, N-terminal BEN31_15755 290eaba13aea2729afe081779f9481b6 370 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 12-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 BEN31_10890 33b384d94361776bed206652e5719825 711 Gene3D G3DSA:3.40.710.10 293 605 7.2E-193 T 12-10-2018 BEN31_10890 33b384d94361776bed206652e5719825 711 SUPERFAMILY SSF56601 209 609 1.31E-102 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_10890 33b384d94361776bed206652e5719825 711 Gene3D G3DSA:1.10.3810.10 63 254 7.2E-193 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_10890 33b384d94361776bed206652e5719825 711 SUPERFAMILY SSF53955 42 250 2.19E-74 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BEN31_10890 33b384d94361776bed206652e5719825 711 Pfam PF00905 Penicillin binding protein transpeptidase domain 320 591 1.2E-42 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_10890 33b384d94361776bed206652e5719825 711 Pfam PF00912 Transglycosylase 54 227 2.2E-65 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_10890 33b384d94361776bed206652e5719825 711 Gene3D G3DSA:3.90.1310.20 48 501 7.2E-193 T 12-10-2018 BEN31_10890 33b384d94361776bed206652e5719825 711 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 64 594 1.4E-178 T 12-10-2018 BEN31_13845 99ac15ad8c389fd4a54d31fe216be20a 445 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 6.6E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13845 99ac15ad8c389fd4a54d31fe216be20a 445 SUPERFAMILY SSF53383 61 441 2.19E-69 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_13845 99ac15ad8c389fd4a54d31fe216be20a 445 SUPERFAMILY SSF46785 2 70 4.1E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13845 99ac15ad8c389fd4a54d31fe216be20a 445 SMART SM00345 7 66 9.2E-18 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13845 99ac15ad8c389fd4a54d31fe216be20a 445 Gene3D G3DSA:1.10.10.10 2 68 7.0E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13845 99ac15ad8c389fd4a54d31fe216be20a 445 Pfam PF00155 Aminotransferase class I and II 98 365 2.9E-21 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_13845 99ac15ad8c389fd4a54d31fe216be20a 445 Gene3D G3DSA:3.40.640.10 69 433 3.6E-89 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 245 6.5E-110 T 12-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 8.8E-73 T 12-10-2018 BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 2.1E-5 T 12-10-2018 BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.4E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.4E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.4E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.4E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.4E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.4E-49 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.2E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 Gene3D G3DSA:3.40.50.720 3 247 6.6E-93 T 12-10-2018 BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 SUPERFAMILY SSF51735 4 246 1.54E-93 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_08345 fa1f4c039dd6d23be96a525a51788804 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 Gene3D G3DSA:3.40.50.720 2 256 2.0E-79 T 12-10-2018 BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 SUPERFAMILY SSF51735 14 256 1.01E-78 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 2.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 2.5E-42 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 2.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 2.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 2.4E-12 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 11 257 2.4E-117 T 12-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 BEN31_18005 e1655b95b9058b02abc38c9feef3a8ab 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 254 3.0E-63 T 12-10-2018 BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 Gene3D G3DSA:3.40.50.1000 83 178 1.0E-86 T 12-10-2018 IPR023214 HAD superfamily BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 105 1.5E-27 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 PIRSF PIRSF000915 1 256 1.2E-58 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 Pfam PF13242 HAD-hyrolase-like 178 250 9.2E-23 T 12-10-2018 BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 SUPERFAMILY SSF56784 2 252 2.71E-73 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 227 6.7E-40 T 12-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 Gene3D G3DSA:3.40.50.1000 4 229 1.0E-86 T 12-10-2018 IPR023214 HAD superfamily BEN31_01520 333fa351943c4ebe79c0abb95b5eddf2 256 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 3 251 8.0E-132 T 12-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 BEN31_00595 38517f68ac0a193e752b079e15046472 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 5.5E-210 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00595 38517f68ac0a193e752b079e15046472 511 Pfam PF01676 Metalloenzyme superfamily 4 499 6.3E-77 T 12-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 BEN31_00595 38517f68ac0a193e752b079e15046472 511 Gene3D G3DSA:3.40.1450.10 77 312 1.3E-231 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00595 38517f68ac0a193e752b079e15046472 511 SUPERFAMILY SSF64158 77 310 2.48E-91 T 12-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00595 38517f68ac0a193e752b079e15046472 511 Gene3D G3DSA:3.40.720.10 5 509 1.3E-231 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_00595 38517f68ac0a193e752b079e15046472 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 5.4E-84 T 12-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00595 38517f68ac0a193e752b079e15046472 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 50.056 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_00595 38517f68ac0a193e752b079e15046472 511 SUPERFAMILY SSF53649 4 509 3.65E-75 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_00595 38517f68ac0a193e752b079e15046472 511 PIRSF PIRSF001492 1 511 4.8E-204 T 12-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 Gene3D G3DSA:3.30.300.20 59 140 1.4E-20 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 SMART SM01245 5 57 3.2E-19 T 12-10-2018 IPR032782 Jag, N-terminal BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 Pfam PF13083 KH domain 63 130 5.2E-11 T 12-10-2018 BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 SMART SM00393 126 206 1.1E-19 T 12-10-2018 IPR001374 R3H domain GO:0003676 BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 SUPERFAMILY SSF82708 155 205 1.77E-7 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 Pfam PF01424 R3H domain 145 203 4.8E-15 T 12-10-2018 IPR001374 R3H domain GO:0003676 BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 Gene3D G3DSA:3.30.30.80 1 57 4.7E-16 T 12-10-2018 IPR038247 Jag, N-terminal domain superfamily BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 Gene3D G3DSA:3.30.1370.50 141 207 1.3E-20 T 12-10-2018 IPR036867 R3H domain superfamily GO:0003676 BEN31_15790 2e9a15ecff61eeba5370c3f17ccd3540 207 Pfam PF14804 Jag N-terminus 8 54 2.6E-16 T 12-10-2018 IPR032782 Jag, N-terminal BEN31_02045 7d4cfe86124c3e26a2555bb7a32043e8 277 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 269 1.8E-101 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BEN31_02045 7d4cfe86124c3e26a2555bb7a32043e8 277 Pfam PF02673 Bacitracin resistance protein BacA 9 271 4.2E-86 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BEN31_02045 7d4cfe86124c3e26a2555bb7a32043e8 277 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 276 18.401 T 12-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 SUPERFAMILY SSF88946 8 98 7.38E-30 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 SUPERFAMILY SSF88659 117 185 1.14E-17 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 4.2E-36 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 Pfam PF04542 Sigma-70 region 2 24 89 1.7E-22 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 4.4E-109 T 12-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 Gene3D G3DSA:1.10.10.10 121 187 3.0E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 Gene3D G3DSA:1.10.1740.10 5 110 7.6E-32 T 12-10-2018 BEN31_14715 9955f2320664cd9864a1dcccc4e09650 187 Pfam PF08281 Sigma-70, region 4 130 180 3.2E-17 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_13825 30751814c06035136641ae109cd6aa6b 230 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 118 5.3E-29 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_13825 30751814c06035136641ae109cd6aa6b 230 Gene3D G3DSA:1.10.3720.10 15 227 1.2E-52 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_13825 30751814c06035136641ae109cd6aa6b 230 SUPERFAMILY SSF161098 21 226 1.57E-45 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_13825 30751814c06035136641ae109cd6aa6b 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 225 1.3E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_12640 00340bea32303b848e46ff6e9ad5f2a8 227 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 1.4E-91 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12640 00340bea32303b848e46ff6e9ad5f2a8 227 PIRSF PIRSF001586 1 222 8.3E-86 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_12640 00340bea32303b848e46ff6e9ad5f2a8 227 SUPERFAMILY SSF52317 2 219 3.2E-77 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_12640 00340bea32303b848e46ff6e9ad5f2a8 227 SMART SM01211 1 219 4.1E-136 T 12-10-2018 BEN31_12640 00340bea32303b848e46ff6e9ad5f2a8 227 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 205 1.2E-43 T 12-10-2018 BEN31_12640 00340bea32303b848e46ff6e9ad5f2a8 227 Gene3D G3DSA:3.40.50.880 1 220 2.1E-71 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_12640 00340bea32303b848e46ff6e9ad5f2a8 227 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 43.68 T 12-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 BEN31_04600 55e096214da7d4f35b73600ee6463726 149 Gene3D G3DSA:1.10.1510.10 1 91 1.2E-29 T 12-10-2018 BEN31_04600 55e096214da7d4f35b73600ee6463726 149 Gene3D G3DSA:1.10.10.410 92 148 1.6E-26 T 12-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal BEN31_04600 55e096214da7d4f35b73600ee6463726 149 SUPERFAMILY SSF89095 1 147 1.99E-41 T 12-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 BEN31_04600 55e096214da7d4f35b73600ee6463726 149 Pfam PF09424 Yqey-like protein 5 147 2.5E-51 T 12-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 SUPERFAMILY SSF48498 79 192 3.49E-20 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 SUPERFAMILY SSF46689 2 80 6.67E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 3.7E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 Gene3D G3DSA:1.10.10.60 1 66 5.6E-27 T 12-10-2018 BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 4.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 4.6E-6 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_05625 3949c6ab43b97cbbb4d64d79fb1e5c06 193 Gene3D G3DSA:1.10.357.10 67 193 2.6E-19 T 12-10-2018 BEN31_00950 d865019b5a81d81f8c7a0c6cff066ba4 120 Pfam PF07252 Protein of unknown function (DUF1433) 40 88 3.5E-9 T 12-10-2018 IPR009881 Protein of unknown function DUF1433 BEN31_00950 d865019b5a81d81f8c7a0c6cff066ba4 120 Gene3D G3DSA:3.10.450.130 38 119 3.7E-9 T 12-10-2018 BEN31_11270 b544a47a9362fe134381c72324dbb0a7 512 SUPERFAMILY SSF55729 16 144 1.92E-17 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_11270 b544a47a9362fe134381c72324dbb0a7 512 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 374 394 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site BEN31_11270 b544a47a9362fe134381c72324dbb0a7 512 Gene3D G3DSA:3.40.630.30 6 225 2.0E-60 T 12-10-2018 BEN31_11270 b544a47a9362fe134381c72324dbb0a7 512 Gene3D G3DSA:3.60.110.10 227 512 7.8E-59 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN31_11270 b544a47a9362fe134381c72324dbb0a7 512 SUPERFAMILY SSF56317 228 495 1.22E-59 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN31_11270 b544a47a9362fe134381c72324dbb0a7 512 Pfam PF00795 Carbon-nitrogen hydrolase 232 488 1.9E-30 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BEN31_11270 b544a47a9362fe134381c72324dbb0a7 512 Pfam PF00583 Acetyltransferase (GNAT) family 26 146 1.9E-11 T 12-10-2018 IPR000182 GNAT domain BEN31_00695 1f888a75d9f747522eded0792e8ff9b8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 4.7E-13 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN31_00695 1f888a75d9f747522eded0792e8ff9b8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 56 77 4.7E-13 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN31_00695 1f888a75d9f747522eded0792e8ff9b8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 4.7E-13 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN31_00695 1f888a75d9f747522eded0792e8ff9b8 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 75 6.8E-24 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN31_00695 1f888a75d9f747522eded0792e8ff9b8 77 Pfam PF03840 Preprotein translocase SecG subunit 4 75 6.1E-23 T 12-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 BEN31_06990 2fb166386897d2db7809e2099ec39081 545 SUPERFAMILY SSF56801 4 543 7.33E-158 T 12-10-2018 BEN31_06990 2fb166386897d2db7809e2099ec39081 545 Gene3D G3DSA:2.30.38.10 354 438 1.9E-122 T 12-10-2018 BEN31_06990 2fb166386897d2db7809e2099ec39081 545 Gene3D G3DSA:3.40.50.980 34 353 1.9E-122 T 12-10-2018 BEN31_06990 2fb166386897d2db7809e2099ec39081 545 Pfam PF00501 AMP-binding enzyme 14 445 2.4E-112 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_06990 2fb166386897d2db7809e2099ec39081 545 Gene3D G3DSA:3.40.50.980 37 211 1.9E-122 T 12-10-2018 BEN31_06990 2fb166386897d2db7809e2099ec39081 545 Gene3D G3DSA:3.30.300.30 439 542 2.2E-32 T 12-10-2018 BEN31_06990 2fb166386897d2db7809e2099ec39081 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 2.9E-17 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_06990 2fb166386897d2db7809e2099ec39081 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_10590 13bb756ab78a71663cf34d5de304354a 458 Pfam PF01554 MatE 253 413 8.3E-32 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_10590 13bb756ab78a71663cf34d5de304354a 458 Pfam PF01554 MatE 28 188 7.5E-33 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_10590 13bb756ab78a71663cf34d5de304354a 458 PIRSF PIRSF006603 11 458 2.0E-83 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_10590 13bb756ab78a71663cf34d5de304354a 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 427 2.4E-61 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_01400 e291f9d7e4afc624025f6445ae9fbe0c 216 Gene3D G3DSA:3.40.50.360 1 212 1.3E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_01400 e291f9d7e4afc624025f6445ae9fbe0c 216 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 210 22.291 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BEN31_01400 e291f9d7e4afc624025f6445ae9fbe0c 216 Pfam PF02525 Flavodoxin-like fold 1 204 3.9E-33 T 12-10-2018 IPR003680 Flavodoxin-like fold BEN31_01400 e291f9d7e4afc624025f6445ae9fbe0c 216 SUPERFAMILY SSF52218 1 210 9.61E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_04300 9f1cf6af47bc7b40d9b510a04726ea7d 241 SUPERFAMILY SSF52833 1 211 1.04E-46 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_04300 9f1cf6af47bc7b40d9b510a04726ea7d 241 Pfam PF01323 DSBA-like thioredoxin domain 2 204 4.1E-47 T 12-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 BEN31_04300 9f1cf6af47bc7b40d9b510a04726ea7d 241 Gene3D G3DSA:3.40.30.10 1 208 5.9E-79 T 12-10-2018 BEN31_16525 acc9ddab45a2602984f47bf1c265f81c 212 Pfam PF00881 Nitroreductase family 14 192 1.2E-32 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN31_16525 acc9ddab45a2602984f47bf1c265f81c 212 Gene3D G3DSA:3.40.109.10 2 212 7.1E-63 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_16525 acc9ddab45a2602984f47bf1c265f81c 212 SUPERFAMILY SSF55469 9 211 4.58E-60 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_18205 98f04549857131c284b36636ee285b16 309 SUPERFAMILY SSF51735 1 306 1.53E-87 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_18205 98f04549857131c284b36636ee285b16 309 Gene3D G3DSA:3.40.50.720 4 236 3.2E-96 T 12-10-2018 BEN31_18205 98f04549857131c284b36636ee285b16 309 Gene3D G3DSA:3.90.25.10 174 300 3.2E-96 T 12-10-2018 BEN31_18205 98f04549857131c284b36636ee285b16 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 228 3.1E-58 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN31_05620 ab155db56ea2a5d4191a0e8256cb0a63 420 SUPERFAMILY SSF103473 13 413 2.22E-56 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_05620 ab155db56ea2a5d4191a0e8256cb0a63 420 Gene3D G3DSA:1.20.1250.20 24 405 4.3E-46 T 12-10-2018 BEN31_05620 ab155db56ea2a5d4191a0e8256cb0a63 420 Pfam PF07690 Major Facilitator Superfamily 36 336 1.9E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 SMART SM01130 6 307 1.4E-70 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 SUPERFAMILY SSF51569 3 309 3.77E-69 T 12-10-2018 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 Pfam PF00701 Dihydrodipicolinate synthetase family 7 304 2.2E-45 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 3.4E-8 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 137 154 3.4E-8 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 3.4E-8 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 Gene3D G3DSA:3.20.20.70 1 307 1.2E-75 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_14055 c2b516b0a5f8dfcab808adf67b6407ab 315 PIRSF PIRSF001365 2 315 2.2E-62 T 12-10-2018 IPR002220 DapA-like GO:0016829 BEN31_07465 799c6b22e8fd43e0c5cd238bc6c56453 282 Gene3D G3DSA:3.30.750.24 163 279 3.1E-35 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_07465 799c6b22e8fd43e0c5cd238bc6c56453 282 Pfam PF01740 STAS domain 172 260 5.9E-15 T 12-10-2018 IPR002645 STAS domain BEN31_07465 799c6b22e8fd43e0c5cd238bc6c56453 282 SUPERFAMILY SSF52091 166 275 2.94E-18 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 36 395 8.7E-96 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 Pfam PF13091 PLD-like domain 240 364 1.4E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 Pfam PF13091 PLD-like domain 60 196 5.7E-13 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 SUPERFAMILY SSF56024 231 383 3.36E-36 T 12-10-2018 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 PIRSF PIRSF000850 35 104 0.43 T 12-10-2018 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 PIRSF PIRSF000850 227 387 2.8E-5 T 12-10-2018 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 SMART SM00155 140 167 7.9E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 SMART SM00155 311 338 4.8E-4 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 Gene3D G3DSA:3.30.870.10 229 370 1.4E-24 T 12-10-2018 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 Gene3D G3DSA:3.30.870.10 39 228 1.4E-38 T 12-10-2018 BEN31_17435 38ac02159726efee6a4c0cd28ce452cd 398 SUPERFAMILY SSF56024 42 219 7.85E-45 T 12-10-2018 BEN31_15505 28525834c1579292066d8af550384ff5 400 Pfam PF06725 3D domain 339 399 5.2E-22 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BEN31_15505 28525834c1579292066d8af550384ff5 400 Pfam PF03990 Domain of unknown function (DUF348) 97 135 1.5E-11 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 BEN31_15505 28525834c1579292066d8af550384ff5 400 Pfam PF03990 Domain of unknown function (DUF348) 154 193 4.4E-12 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 BEN31_15505 28525834c1579292066d8af550384ff5 400 Pfam PF03990 Domain of unknown function (DUF348) 40 80 2.9E-13 T 12-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 BEN31_15505 28525834c1579292066d8af550384ff5 400 SMART SM01208 208 286 4.4E-23 T 12-10-2018 IPR011098 G5 domain BEN31_15505 28525834c1579292066d8af550384ff5 400 Gene3D G3DSA:2.20.230.10 209 285 4.1E-15 T 12-10-2018 BEN31_15505 28525834c1579292066d8af550384ff5 400 Pfam PF07501 G5 domain 213 285 1.9E-16 T 12-10-2018 IPR011098 G5 domain BEN31_15505 28525834c1579292066d8af550384ff5 400 SUPERFAMILY SSF50685 341 389 6.28E-9 T 12-10-2018 IPR036908 RlpA-like domain superfamily BEN31_01375 a6587ea53101dff68882c8554456f45c 261 Gene3D G3DSA:3.40.50.300 5 250 3.8E-55 T 12-10-2018 BEN31_01375 a6587ea53101dff68882c8554456f45c 261 SMART SM00382 30 225 1.7E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_01375 a6587ea53101dff68882c8554456f45c 261 Pfam PF00005 ABC transporter 21 173 3.9E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_01375 a6587ea53101dff68882c8554456f45c 261 SUPERFAMILY SSF52540 6 233 3.99E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01375 a6587ea53101dff68882c8554456f45c 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_01375 a6587ea53101dff68882c8554456f45c 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 3.8E-113 T 12-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 BEN31_09965 b7b73b9704f7c5682bb8bd60a5370037 152 SUPERFAMILY SSF55136 1 151 1.74E-24 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_09965 b7b73b9704f7c5682bb8bd60a5370037 152 Pfam PF06445 GyrI-like small molecule binding domain 1 151 2.1E-21 T 12-10-2018 IPR029442 GyrI-like small molecule binding domain BEN31_09965 b7b73b9704f7c5682bb8bd60a5370037 152 Gene3D G3DSA:3.20.80.10 1 152 2.1E-27 T 12-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily BEN31_09965 b7b73b9704f7c5682bb8bd60a5370037 152 SMART SM00871 1 152 2.1E-21 T 12-10-2018 IPR010499 Bacterial transcription activator, effector binding BEN31_00645 6e635918dc00324a3101b2b038a961ec 178 SUPERFAMILY SSF46785 9 160 1.72E-19 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_00645 6e635918dc00324a3101b2b038a961ec 178 Gene3D G3DSA:1.10.10.10 8 91 1.1E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_00645 6e635918dc00324a3101b2b038a961ec 178 PIRSF PIRSF006707 2 178 1.4E-48 T 12-10-2018 IPR026282 DNA-binding protein, MJ1563 type BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 SUPERFAMILY SSF50615 1 82 7.59E-27 T 12-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 80 4.0E-23 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 SUPERFAMILY SSF52540 84 354 5.13E-87 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 469 57.381 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 Gene3D G3DSA:2.40.10.170 1 82 5.5E-32 T 12-10-2018 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 Gene3D G3DSA:3.40.50.300 84 352 2.3E-112 T 12-10-2018 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 SMART SM00382 150 413 2.1E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 SUPERFAMILY SSF47917 354 469 2.59E-52 T 12-10-2018 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 Gene3D G3DSA:1.10.1140.10 354 473 1.7E-57 T 12-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 469 8.5E-258 T 12-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 BEN31_17635 38f0a9446a3759726cf6568daf0ff1f3 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 5.5E-66 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_15020 9404ad07b38530c3fb052b8ff4883f18 113 Gene3D G3DSA:3.90.470.10 1 113 6.1E-51 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_15020 9404ad07b38530c3fb052b8ff4883f18 113 SUPERFAMILY SSF54843 1 112 3.27E-44 T 12-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_15020 9404ad07b38530c3fb052b8ff4883f18 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 5.1E-37 T 12-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 BEN31_15020 9404ad07b38530c3fb052b8ff4883f18 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.6E-54 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15020 9404ad07b38530c3fb052b8ff4883f18 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 30.545 T 12-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15020 9404ad07b38530c3fb052b8ff4883f18 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 12-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_03195 6e30d57cb46cf4fe3f3305d7d5a09beb 113 Pfam PF14034 Sporulation protein YtrH 10 108 2.0E-42 T 12-10-2018 IPR025689 Sporulation protein YtrH BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 Gene3D G3DSA:3.40.50.1380 1 196 1.6E-89 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 SMART SM00798 135 447 1.9E-194 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 Pfam PF02142 MGS-like domain 16 129 7.0E-30 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 446 7.6E-120 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 512 1.1E-248 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 512 44.899 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 PIRSF PIRSF000414 1 512 8.8E-214 T 12-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 Gene3D G3DSA:3.40.140.20 203 360 2.6E-59 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 SMART SM00851 15 130 1.1E-55 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 Gene3D G3DSA:3.40.140.20 387 512 1.3E-56 T 12-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 SUPERFAMILY SSF52335 3 194 3.01E-71 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN31_12615 a0ea2acc30b6c7181220848441c1bc94 512 SUPERFAMILY SSF53927 207 512 4.31E-128 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 SUPERFAMILY SSF50346 101 171 9.42E-20 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 Pfam PF05239 PRC-barrel domain 98 171 2.3E-13 T 12-10-2018 IPR027275 PRC-barrel domain BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 171 5.7E-51 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 Pfam PF01782 RimM N-terminal domain 8 91 3.9E-23 T 12-10-2018 IPR002676 RimM, N-terminal GO:0006364 BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 171 23.782 T 12-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 Gene3D G3DSA:2.30.30.240 96 174 5.4E-22 T 12-10-2018 BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 Gene3D G3DSA:2.40.30.60 5 93 2.4E-20 T 12-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 BEN31_08295 bf9a23a2a54ecb0ab605c8034a60f832 174 SUPERFAMILY SSF50447 4 93 3.88E-21 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_17150 463a0f39695b4e96530ed3b13910acc9 452 Gene3D G3DSA:3.40.309.10 209 404 2.0E-177 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_17150 463a0f39695b4e96530ed3b13910acc9 452 Pfam PF00171 Aldehyde dehydrogenase family 10 424 1.2E-92 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_17150 463a0f39695b4e96530ed3b13910acc9 452 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 233 244 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN31_17150 463a0f39695b4e96530ed3b13910acc9 452 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 205 212 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN31_17150 463a0f39695b4e96530ed3b13910acc9 452 PIRSF PIRSF036492 2 452 4.5E-182 T 12-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 BEN31_17150 463a0f39695b4e96530ed3b13910acc9 452 Gene3D G3DSA:3.40.605.10 15 424 2.0E-177 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_17150 463a0f39695b4e96530ed3b13910acc9 452 SUPERFAMILY SSF53720 6 438 2.23E-127 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_08930 1a4c79f0f59cc9bf05084a5fd4efdd4f 440 Pfam PF02562 PhoH-like protein 231 435 3.4E-54 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 BEN31_08930 1a4c79f0f59cc9bf05084a5fd4efdd4f 440 Gene3D G3DSA:3.40.50.300 229 439 1.4E-69 T 12-10-2018 BEN31_08930 1a4c79f0f59cc9bf05084a5fd4efdd4f 440 Gene3D G3DSA:3.40.50.1010 2 150 2.6E-23 T 12-10-2018 BEN31_08930 1a4c79f0f59cc9bf05084a5fd4efdd4f 440 SUPERFAMILY SSF52540 24 420 1.33E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08930 1a4c79f0f59cc9bf05084a5fd4efdd4f 440 SMART SM00670 3 135 1.2E-25 T 12-10-2018 IPR002716 PIN domain BEN31_08930 1a4c79f0f59cc9bf05084a5fd4efdd4f 440 Pfam PF13638 PIN domain 5 147 5.3E-35 T 12-10-2018 IPR002716 PIN domain BEN31_16725 58fbbee29fff011d387e4f42a6a2d69a 109 SUPERFAMILY SSF46973 5 103 6.54E-31 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BEN31_16725 58fbbee29fff011d387e4f42a6a2d69a 109 Gene3D G3DSA:1.20.58.280 2 107 1.7E-32 T 12-10-2018 BEN31_16725 58fbbee29fff011d387e4f42a6a2d69a 109 PIRSF PIRSF000699 1 109 1.4E-32 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BEN31_16725 58fbbee29fff011d387e4f42a6a2d69a 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 11 102 6.9E-31 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 8.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 8.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 8.3E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 SUPERFAMILY SSF52172 1 129 4.84E-28 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 SUPERFAMILY SSF46894 123 198 2.69E-18 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 1.8E-18 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 SMART SM00421 135 192 5.0E-19 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 SMART SM00448 2 113 3.9E-26 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 Gene3D G3DSA:3.40.50.12740 2 197 6.3E-58 T 12-10-2018 BEN31_03085 0bfca5c5ee438afd05d00d181f1d5088 199 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 SMART SM00650 36 212 2.5E-87 T 12-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 280 1.4E-80 T 12-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 12-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 SUPERFAMILY SSF53335 16 290 7.32E-75 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 Gene3D G3DSA:1.10.8.100 220 291 5.9E-21 T 12-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 286 1.9E-87 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 Gene3D G3DSA:3.40.50.150 2 216 1.1E-74 T 12-10-2018 BEN31_15495 8e9f47379f9236bac290aa8e95e4acf9 292 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 288 56.629 T 12-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 SMART SM00354 2 72 2.4E-31 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 SUPERFAMILY SSF53822 62 333 8.41E-71 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 Gene3D G3DSA:3.40.50.2300 62 309 8.1E-66 T 12-10-2018 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 Gene3D G3DSA:1.10.260.40 1 60 3.5E-23 T 12-10-2018 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 3.7E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 Gene3D G3DSA:3.40.50.2300 160 289 8.1E-66 T 12-10-2018 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 12-10-2018 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 SUPERFAMILY SSF47413 2 60 7.5E-19 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 Pfam PF13377 Periplasmic binding protein-like domain 169 332 9.0E-36 T 12-10-2018 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 3.1E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_01165 b474e6f7fb373fab43aae20456bbb044 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 3.1E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_11630 b6d59f50d1a037f63214aadf5c25c912 176 Gene3D G3DSA:2.40.380.10 14 169 1.1E-12 T 12-10-2018 IPR035930 FomD-like superfamily BEN31_11630 b6d59f50d1a037f63214aadf5c25c912 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 1.8E-17 T 12-10-2018 IPR007295 Domain of unknown function DUF402 BEN31_11630 b6d59f50d1a037f63214aadf5c25c912 176 Hamap MF_01568 UPF0374 protein . 1 175 49.627 T 12-10-2018 IPR016882 Uncharacterised protein family UPF0374 BEN31_11630 b6d59f50d1a037f63214aadf5c25c912 176 PIRSF PIRSF028345 1 176 1.0E-79 T 12-10-2018 IPR016882 Uncharacterised protein family UPF0374 BEN31_11630 b6d59f50d1a037f63214aadf5c25c912 176 SUPERFAMILY SSF159234 3 170 9.29E-34 T 12-10-2018 IPR035930 FomD-like superfamily BEN31_18360 eec47340b1739a3271de7612f0bea09b 597 Gene3D G3DSA:1.10.1370.20 226 597 1.4E-115 T 12-10-2018 BEN31_18360 eec47340b1739a3271de7612f0bea09b 597 Pfam PF08439 Oligopeptidase F 116 177 6.3E-9 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain BEN31_18360 eec47340b1739a3271de7612f0bea09b 597 SUPERFAMILY SSF55486 7 581 1.74E-96 T 12-10-2018 BEN31_18360 eec47340b1739a3271de7612f0bea09b 597 Pfam PF01432 Peptidase family M3 203 582 1.1E-23 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BEN31_18360 eec47340b1739a3271de7612f0bea09b 597 Gene3D G3DSA:1.20.140.70 23 179 5.7E-9 T 12-10-2018 BEN31_18360 eec47340b1739a3271de7612f0bea09b 597 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 9 592 2.4E-203 T 12-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 Gene3D G3DSA:3.40.50.620 1 331 3.5E-144 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 Gene3D G3DSA:1.10.10.350 390 483 3.5E-34 T 12-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 482 3.0E-202 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 SUPERFAMILY SSF48163 298 482 2.35E-50 T 12-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 323 7.0E-127 T 12-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 1.3E-29 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 1.3E-29 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 1.3E-29 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 1.3E-29 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 1.3E-29 T 12-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 483 33.857 T 12-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 SUPERFAMILY SSF52374 5 316 6.44E-113 T 12-10-2018 BEN31_15160 5016068f73f86590e45ad4e0561d0028 483 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 44.572 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 2.0E-147 T 12-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 177 3.1E-76 T 12-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 5.9E-65 T 12-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 SUPERFAMILY SSF48179 183 331 2.21E-70 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 Gene3D G3DSA:1.10.3730.40 182 337 2.9E-69 T 12-10-2018 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 PIRSF PIRSF000116 201 332 3.2E-16 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 PIRSF PIRSF000116 5 206 7.6E-42 T 12-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 SUPERFAMILY SSF51735 3 182 4.16E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_03645 e5e2a1db13c57f3fe58df949e0a580d0 342 Gene3D G3DSA:3.40.50.720 1 181 3.9E-77 T 12-10-2018 BEN31_10210 1d156113406cd9c532849d94c9f27661 236 Gene3D G3DSA:1.20.910.10 1 220 2.1E-64 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BEN31_10210 1d156113406cd9c532849d94c9f27661 236 Pfam PF03070 TENA/THI-4/PQQC family 10 214 7.3E-58 T 12-10-2018 IPR004305 Thiaminase-2/PQQC BEN31_10210 1d156113406cd9c532849d94c9f27661 236 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 215 7.7E-81 T 12-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 BEN31_10210 1d156113406cd9c532849d94c9f27661 236 SUPERFAMILY SSF48613 3 220 3.34E-68 T 12-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 BEN31_10645 7706d64849adf2afd5e83b77f1f5514c 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 2.5E-31 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 124 1.5E-19 T 12-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 Gene3D G3DSA:1.10.10.10 1 73 9.7E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 SMART SM00529 24 122 3.9E-44 T 12-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 Gene3D G3DSA:1.10.60.10 74 142 3.8E-34 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 SUPERFAMILY SSF47979 63 126 2.59E-19 T 12-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 1 60 8.3E-27 T 12-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 44.725 T 12-10-2018 IPR022897 HTH-type transcription regulator MntR BEN31_05035 7aefe11929662aeaa40d2fbf205b634c 144 SUPERFAMILY SSF46785 3 62 2.97E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_17270 177669f48c88c53e9d508d06fc9b1407 410 Gene3D G3DSA:1.20.1250.20 214 407 6.8E-27 T 12-10-2018 BEN31_17270 177669f48c88c53e9d508d06fc9b1407 410 Gene3D G3DSA:1.20.1250.20 14 205 5.1E-39 T 12-10-2018 BEN31_17270 177669f48c88c53e9d508d06fc9b1407 410 Pfam PF07690 Major Facilitator Superfamily 22 334 2.2E-50 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_17270 177669f48c88c53e9d508d06fc9b1407 410 SUPERFAMILY SSF103473 6 399 3.27E-72 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.5E-50 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 1.5E-50 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 1.5E-50 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 1.5E-50 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 1.5E-50 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 309 1.6E-134 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 7.9E-50 T 12-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 12-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 PIRSF PIRSF000102 3 313 7.5E-115 T 12-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 Gene3D G3DSA:3.90.110.10 149 314 3.9E-66 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 312 8.7E-42 T 12-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 315 47.693 T 12-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 SUPERFAMILY SSF56327 147 311 4.32E-59 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 Gene3D G3DSA:3.40.50.720 1 148 1.1E-58 T 12-10-2018 BEN31_14115 8a00da74d6b58c27be2e85fa26f78b83 315 SUPERFAMILY SSF51735 4 146 1.02E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_02280 adbdeaa4ab6dd0fa9937b9ad0fde9a6d 211 SMART SM00530 11 66 4.7E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_02280 adbdeaa4ab6dd0fa9937b9ad0fde9a6d 211 SUPERFAMILY SSF47413 4 69 1.3E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_02280 adbdeaa4ab6dd0fa9937b9ad0fde9a6d 211 Pfam PF01381 Helix-turn-helix 12 66 5.2E-14 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_02280 adbdeaa4ab6dd0fa9937b9ad0fde9a6d 211 Gene3D G3DSA:1.10.260.40 4 77 1.5E-14 T 12-10-2018 BEN31_02280 adbdeaa4ab6dd0fa9937b9ad0fde9a6d 211 Pfam PF06803 Protein of unknown function (DUF1232) 169 201 4.6E-13 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 BEN31_17130 632de143c94f2fcdf41f6a0a25e37166 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 7.1E-86 T 12-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_17130 632de143c94f2fcdf41f6a0a25e37166 269 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.0E-87 T 12-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 BEN31_17130 632de143c94f2fcdf41f6a0a25e37166 269 Gene3D G3DSA:3.40.1190.20 1 269 8.8E-93 T 12-10-2018 IPR029056 Ribokinase-like BEN31_17130 632de143c94f2fcdf41f6a0a25e37166 269 SUPERFAMILY SSF53613 1 263 7.33E-76 T 12-10-2018 IPR029056 Ribokinase-like BEN31_07500 1fc0f8b1ca7f854265aa34df1f554fb2 302 Pfam PF00892 EamA-like transporter family 16 142 4.6E-15 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_07500 1fc0f8b1ca7f854265aa34df1f554fb2 302 Pfam PF00892 EamA-like transporter family 154 287 2.2E-18 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_07500 1fc0f8b1ca7f854265aa34df1f554fb2 302 SUPERFAMILY SSF103481 190 290 3.14E-13 T 12-10-2018 BEN31_07500 1fc0f8b1ca7f854265aa34df1f554fb2 302 SUPERFAMILY SSF103481 43 145 3.4E-15 T 12-10-2018 BEN31_09535 8cf17a5dbfe76f94ab6153df72569738 172 Gene3D G3DSA:3.30.240.20 76 149 8.9E-17 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BEN31_09535 8cf17a5dbfe76f94ab6153df72569738 172 Pfam PF04239 Protein of unknown function (DUF421) 83 152 6.1E-19 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 SUPERFAMILY SSF55846 1 154 2.3E-48 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 Pfam PF01471 Putative peptidoglycan binding domain 232 293 2.6E-15 T 12-10-2018 IPR002477 Peptidoglycan binding-like BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 SMART SM00644 11 153 1.0E-33 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 Gene3D G3DSA:1.10.101.10 222 296 1.8E-16 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 Pfam PF01476 LysM domain 165 207 2.0E-17 T 12-10-2018 IPR018392 LysM domain BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 Gene3D G3DSA:3.10.350.10 154 216 4.7E-20 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 Gene3D G3DSA:3.40.80.10 1 153 2.8E-55 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 SUPERFAMILY SSF47090 226 296 1.02E-15 T 12-10-2018 IPR036365 PGBD-like superfamily BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 22 140 3.6E-24 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 SUPERFAMILY SSF54106 162 208 1.19E-13 T 12-10-2018 BEN31_09915 bdefa91c6e28bd9b50a88ea507958a5c 299 SMART SM00257 164 208 5.7E-18 T 12-10-2018 IPR018392 LysM domain BEN31_01980 4844ff79e46b2f10979a91140f096c7b 133 Gene3D G3DSA:2.60.120.460 1 131 1.5E-53 T 12-10-2018 IPR035917 YjbQ-like superfamily BEN31_01980 4844ff79e46b2f10979a91140f096c7b 133 PIRSF PIRSF004681 1 132 6.2E-39 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 BEN31_01980 4844ff79e46b2f10979a91140f096c7b 133 SUPERFAMILY SSF111038 2 129 5.36E-47 T 12-10-2018 IPR035917 YjbQ-like superfamily BEN31_01980 4844ff79e46b2f10979a91140f096c7b 133 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 3 130 7.4E-51 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 BEN31_01980 4844ff79e46b2f10979a91140f096c7b 133 Pfam PF01894 Uncharacterised protein family UPF0047 16 129 2.5E-39 T 12-10-2018 IPR001602 Uncharacterised protein family UPF0047 BEN31_05270 3d9a96919a44229471497606ea396e34 218 Gene3D G3DSA:1.10.3720.10 1 217 9.9E-55 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_05270 3d9a96919a44229471497606ea396e34 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 109 3.0E-31 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_05270 3d9a96919a44229471497606ea396e34 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 215 1.9E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_05270 3d9a96919a44229471497606ea396e34 218 SUPERFAMILY SSF161098 12 206 8.24E-43 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_08160 f1c8b41a8e63f1a176b940ebbf8a072a 263 Pfam PF00460 Flagella basal body rod protein 5 35 5.5E-12 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN31_08160 f1c8b41a8e63f1a176b940ebbf8a072a 263 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN31_08160 f1c8b41a8e63f1a176b940ebbf8a072a 263 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 242 7.5E-57 T 12-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 BEN31_08160 f1c8b41a8e63f1a176b940ebbf8a072a 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 146 244 4.0E-30 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN31_08160 f1c8b41a8e63f1a176b940ebbf8a072a 263 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 134 5.7E-40 T 12-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G BEN31_08160 f1c8b41a8e63f1a176b940ebbf8a072a 263 SUPERFAMILY SSF117143 91 223 1.31E-34 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BEN31_08160 f1c8b41a8e63f1a176b940ebbf8a072a 263 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 261 5.0E-24 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN31_04125 5205f5d9916e914cff99f3ef8dba7e74 221 SUPERFAMILY SSF53335 11 218 3.53E-41 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_04125 5205f5d9916e914cff99f3ef8dba7e74 221 Gene3D G3DSA:3.40.50.150 2 220 8.2E-63 T 12-10-2018 BEN31_04125 5205f5d9916e914cff99f3ef8dba7e74 221 Pfam PF01596 O-methyltransferase 44 216 5.0E-29 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 BEN31_00105 a6959f2dc01ac5ec4e1894688dbf8a22 118 Gene3D G3DSA:3.40.50.360 1 118 7.9E-37 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_00105 a6959f2dc01ac5ec4e1894688dbf8a22 118 TIGRFAM TIGR00333 nrdI: nrdI protein 3 109 1.4E-29 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BEN31_00105 a6959f2dc01ac5ec4e1894688dbf8a22 118 PIRSF PIRSF005087 1 118 7.8E-36 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BEN31_00105 a6959f2dc01ac5ec4e1894688dbf8a22 118 Pfam PF07972 NrdI Flavodoxin like 3 111 1.8E-29 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BEN31_00105 a6959f2dc01ac5ec4e1894688dbf8a22 118 SUPERFAMILY SSF52218 1 114 2.71E-20 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_11960 3563b358ec1a43e6b17d144c61932e28 278 SUPERFAMILY SSF50182 101 164 6.87E-11 T 12-10-2018 IPR010920 LSM domain superfamily BEN31_11960 3563b358ec1a43e6b17d144c61932e28 278 Gene3D G3DSA:2.30.30.60 116 165 2.5E-17 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BEN31_11960 3563b358ec1a43e6b17d144c61932e28 278 Gene3D G3DSA:3.30.70.100 168 265 5.3E-6 T 12-10-2018 BEN31_11960 3563b358ec1a43e6b17d144c61932e28 278 Pfam PF00924 Mechanosensitive ion channel 58 266 6.7E-35 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BEN31_11960 3563b358ec1a43e6b17d144c61932e28 278 SUPERFAMILY SSF82861 16 99 1.06E-10 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BEN31_11365 3076bf39004b4c11479c68e9de97dbb8 631 PIRSF PIRSF000549 1 631 8.1E-269 T 12-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 BEN31_11365 3076bf39004b4c11479c68e9de97dbb8 631 Pfam PF08298 PrkA AAA domain 22 371 3.6E-155 T 12-10-2018 IPR013153 PrkA AAA domain BEN31_11365 3076bf39004b4c11479c68e9de97dbb8 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 2.1E-95 T 12-10-2018 IPR010650 PrkA C-terminal domain BEN31_11365 3076bf39004b4c11479c68e9de97dbb8 631 SUPERFAMILY SSF52540 68 463 1.81E-11 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11365 3076bf39004b4c11479c68e9de97dbb8 631 SMART SM00763 21 371 6.0E-197 T 12-10-2018 IPR013153 PrkA AAA domain BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 Gene3D G3DSA:1.10.10.10 3 88 1.1E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 Pfam PF03466 LysR substrate binding domain 91 284 4.6E-39 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 Gene3D G3DSA:3.40.190.290 92 293 3.3E-44 T 12-10-2018 BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-9 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 SUPERFAMILY SSF46785 5 111 2.67E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 SUPERFAMILY SSF53850 91 287 1.27E-36 T 12-10-2018 BEN31_12690 2a09992f50f9fe3a7a1c03da83cefb0b 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.8E-18 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16785 0937e3a8891dc7ad87e34181683c4be3 256 Gene3D G3DSA:3.40.50.300 1 253 1.0E-65 T 12-10-2018 BEN31_16785 0937e3a8891dc7ad87e34181683c4be3 256 SMART SM00382 26 215 1.9E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16785 0937e3a8891dc7ad87e34181683c4be3 256 Pfam PF00005 ABC transporter 18 165 2.0E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16785 0937e3a8891dc7ad87e34181683c4be3 256 SUPERFAMILY SSF52540 2 232 7.17E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16785 0937e3a8891dc7ad87e34181683c4be3 256 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_18520 745cfc40e7780e429667bebb1b078d66 396 SUPERFAMILY SSF51556 58 359 2.82E-92 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_18520 745cfc40e7780e429667bebb1b078d66 396 Gene3D G3DSA:3.20.20.140 58 359 2.8E-141 T 12-10-2018 BEN31_18520 745cfc40e7780e429667bebb1b078d66 396 Gene3D G3DSA:2.30.40.10 12 387 2.8E-141 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_18520 745cfc40e7780e429667bebb1b078d66 396 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 386 1.5E-127 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BEN31_18520 745cfc40e7780e429667bebb1b078d66 396 SUPERFAMILY SSF51338 5 392 3.31E-19 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_18520 745cfc40e7780e429667bebb1b078d66 396 PIRSF PIRSF038994 3 392 1.0E-130 T 12-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 BEN31_18520 745cfc40e7780e429667bebb1b078d66 396 Pfam PF01979 Amidohydrolase family 54 388 5.9E-28 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN31_03945 72501f4f447a710154c6243a162d558b 516 Pfam PF01943 Polysaccharide biosynthesis protein 6 308 8.9E-64 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BEN31_03945 72501f4f447a710154c6243a162d558b 516 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 499 8.5E-15 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BEN31_03945 72501f4f447a710154c6243a162d558b 516 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 6 494 1.5E-178 T 12-10-2018 IPR014249 Sporulation stage V protein B BEN31_03945 72501f4f447a710154c6243a162d558b 516 PIRSF PIRSF038958 1 516 1.1E-185 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BEN31_17430 fe82defe044808589af2aad16e5ea5fd 320 Gene3D G3DSA:3.20.20.150 2 307 1.6E-91 T 12-10-2018 BEN31_17430 fe82defe044808589af2aad16e5ea5fd 320 SUPERFAMILY SSF51658 87 293 6.01E-14 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BEN31_17430 fe82defe044808589af2aad16e5ea5fd 320 Hamap MF_00606 UV DNA damage endonuclease [uvsE]. 12 304 38.637 T 12-10-2018 IPR023520 UV-endonuclease UvdE, bacterial GO:0004519|GO:0009411 BEN31_17430 fe82defe044808589af2aad16e5ea5fd 320 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 303 4.3E-116 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 BEN31_17430 fe82defe044808589af2aad16e5ea5fd 320 Pfam PF03851 UV-endonuclease UvdE 5 274 1.9E-108 T 12-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 BEN31_13705 e40350a1ee2fe521f8c3b0029745c65f 544 Pfam PF04234 CopC domain 26 120 6.1E-21 T 12-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 BEN31_13705 e40350a1ee2fe521f8c3b0029745c65f 544 SUPERFAMILY SSF81296 25 120 1.05E-22 T 12-10-2018 IPR014756 Immunoglobulin E-set BEN31_13705 e40350a1ee2fe521f8c3b0029745c65f 544 Gene3D G3DSA:2.60.40.1220 26 125 1.0E-25 T 12-10-2018 BEN31_13705 e40350a1ee2fe521f8c3b0029745c65f 544 Pfam PF05425 Copper resistance protein D 331 422 3.5E-15 T 12-10-2018 IPR008457 Copper resistance protein D GO:0016021 BEN31_04090 5b811bdee8677c9d417568ccf1d86698 88 Hamap MF_01507 UPF0297 protein . 1 85 28.491 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 BEN31_04090 5b811bdee8677c9d417568ccf1d86698 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 83 3.0E-38 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 BEN31_04090 5b811bdee8677c9d417568ccf1d86698 88 PIRSF PIRSF037258 1 88 3.9E-46 T 12-10-2018 IPR009309 Uncharacterised protein family UPF0297 BEN31_08150 6dcd6cf53cc5fd9af362f7fbfe62150c 142 Pfam PF03748 Flagellar basal body-associated protein FliL 49 142 1.9E-16 T 12-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 BEN31_01390 ff8489a93ae806778468453f031260ee 148 Pfam PF01592 NifU-like N terminal domain 11 128 1.3E-40 T 12-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 BEN31_01390 ff8489a93ae806778468453f031260ee 148 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 7 138 1.8E-57 T 12-10-2018 BEN31_01390 ff8489a93ae806778468453f031260ee 148 SUPERFAMILY SSF82649 1 138 8.89E-52 T 12-10-2018 BEN31_01390 ff8489a93ae806778468453f031260ee 148 Gene3D G3DSA:3.90.1010.10 1 147 1.1E-62 T 12-10-2018 BEN31_18055 53203f3f9ad95d1d5dc9a6bc775c1f96 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 309 8.0E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_18055 53203f3f9ad95d1d5dc9a6bc775c1f96 321 Gene3D G3DSA:1.10.3720.10 66 319 2.4E-65 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_18055 53203f3f9ad95d1d5dc9a6bc775c1f96 321 SUPERFAMILY SSF161098 70 308 2.09E-51 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_06935 bc2e3db7a937cc253928a25edf0a6bfc 366 Gene3D G3DSA:3.30.300.210 214 366 4.3E-16 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BEN31_06935 bc2e3db7a937cc253928a25edf0a6bfc 366 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 365 4.7E-77 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_06935 bc2e3db7a937cc253928a25edf0a6bfc 366 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 198 363 9.8E-32 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_09330 ae75f0be07f419a79a7d032bcd594326 266 SUPERFAMILY SSF55797 142 263 6.8E-28 T 12-10-2018 IPR035940 CAP superfamily BEN31_09330 ae75f0be07f419a79a7d032bcd594326 266 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 143 265 8.1E-61 T 12-10-2018 IPR014258 CAP domain, YkwD-like BEN31_09330 ae75f0be07f419a79a7d032bcd594326 266 Pfam PF00188 Cysteine-rich secretory protein family 151 263 8.1E-25 T 12-10-2018 IPR014044 CAP domain BEN31_09330 ae75f0be07f419a79a7d032bcd594326 266 Gene3D G3DSA:3.40.33.10 18 264 2.1E-66 T 12-10-2018 IPR035940 CAP superfamily BEN31_12240 2105975a51874ae480eee0508a886d7e 141 Pfam PF13411 MerR HTH family regulatory protein 4 71 3.0E-19 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_12240 2105975a51874ae480eee0508a886d7e 141 SMART SM00422 4 74 1.9E-29 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_12240 2105975a51874ae480eee0508a886d7e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 7.9E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_12240 2105975a51874ae480eee0508a886d7e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 7.9E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_12240 2105975a51874ae480eee0508a886d7e 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 7.9E-6 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_12240 2105975a51874ae480eee0508a886d7e 141 Gene3D G3DSA:1.10.1660.10 1 140 2.2E-27 T 12-10-2018 BEN31_12240 2105975a51874ae480eee0508a886d7e 141 SUPERFAMILY SSF46955 4 119 5.04E-22 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_01920 a2e449876f2a8b0d2ee5e4a8eaa7100c 397 SUPERFAMILY SSF53383 5 385 5.13E-118 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_01920 a2e449876f2a8b0d2ee5e4a8eaa7100c 397 Pfam PF00155 Aminotransferase class I and II 30 373 2.0E-68 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_01920 a2e449876f2a8b0d2ee5e4a8eaa7100c 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BEN31_01920 a2e449876f2a8b0d2ee5e4a8eaa7100c 397 Gene3D G3DSA:3.40.640.10 61 282 6.1E-128 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_01920 a2e449876f2a8b0d2ee5e4a8eaa7100c 397 Gene3D G3DSA:3.90.1150.10 30 378 6.1E-128 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_10410 e50e434bb4ac7dc95847b9980e410664 421 Pfam PF07690 Major Facilitator Superfamily 36 361 3.4E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_10410 e50e434bb4ac7dc95847b9980e410664 421 Gene3D G3DSA:1.20.1250.20 10 401 4.4E-29 T 12-10-2018 BEN31_10410 e50e434bb4ac7dc95847b9980e410664 421 SUPERFAMILY SSF103473 12 405 2.88E-36 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_09980 2baa28bf0a6b9874ca914a09b44098e9 173 Gene3D G3DSA:1.20.120.450 1 171 8.7E-69 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_09980 2baa28bf0a6b9874ca914a09b44098e9 173 PIRSF PIRSF031551 1 173 2.0E-54 T 12-10-2018 IPR012550 Protein of unknown function DUF1706 BEN31_09980 2baa28bf0a6b9874ca914a09b44098e9 173 Pfam PF08020 Protein of unknown function (DUF1706) 1 169 1.1E-51 T 12-10-2018 IPR012550 Protein of unknown function DUF1706 BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 SMART SM00267 365 538 5.7E-58 T 12-10-2018 IPR000160 GGDEF domain BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 SMART SM00052 548 793 6.8E-121 T 12-10-2018 IPR001633 EAL domain BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 SUPERFAMILY SSF141868 555 798 3.79E-88 T 12-10-2018 IPR035919 EAL domain superfamily BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 Gene3D G3DSA:3.20.20.450 552 800 3.8E-97 T 12-10-2018 IPR035919 EAL domain superfamily BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 Gene3D G3DSA:3.30.70.270 371 551 5.6E-55 T 12-10-2018 BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 Pfam PF00563 EAL domain 555 788 1.8E-71 T 12-10-2018 IPR001633 EAL domain BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 537 8.5E-34 T 12-10-2018 IPR000160 GGDEF domain BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 SUPERFAMILY SSF55785 249 363 1.07E-7 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 SUPERFAMILY SSF55073 381 540 6.67E-45 T 12-10-2018 IPR029787 Nucleotide cyclase BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 Pfam PF03707 Bacterial signalling protein N terminal repeat 117 167 1.1E-10 T 12-10-2018 IPR005330 MHYT domain BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 Pfam PF03707 Bacterial signalling protein N terminal repeat 54 110 4.2E-16 T 12-10-2018 IPR005330 MHYT domain BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 Gene3D G3DSA:3.30.450.20 246 370 8.9E-10 T 12-10-2018 BEN31_09580 d4870453e88c2d2b692ba1991636bed2 807 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 533 1.0E-45 T 12-10-2018 IPR000160 GGDEF domain BEN31_09925 8c7236b30267ee908b4c01fb41567724 207 Gene3D G3DSA:3.40.630.100 3 207 1.2E-61 T 12-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily BEN31_09925 8c7236b30267ee908b4c01fb41567724 207 Pfam PF05908 Poly-gamma-glutamate hydrolase 8 197 9.0E-71 T 12-10-2018 IPR008585 Poly-gamma-glutamate hydrolase BEN31_02800 ca42411b6de2c7251352699664069f44 466 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 11 461 1.2E-171 T 12-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 BEN31_02800 ca42411b6de2c7251352699664069f44 466 Gene3D G3DSA:3.30.70.360 204 294 1.9E-171 T 12-10-2018 BEN31_02800 ca42411b6de2c7251352699664069f44 466 Gene3D G3DSA:3.30.70.360 184 380 1.9E-171 T 12-10-2018 BEN31_02800 ca42411b6de2c7251352699664069f44 466 SUPERFAMILY SSF55031 184 372 3.14E-47 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_02800 ca42411b6de2c7251352699664069f44 466 Gene3D G3DSA:3.40.630.10 13 464 1.9E-171 T 12-10-2018 BEN31_02800 ca42411b6de2c7251352699664069f44 466 SUPERFAMILY SSF53187 9 465 1.94E-66 T 12-10-2018 BEN31_02800 ca42411b6de2c7251352699664069f44 466 Pfam PF01546 Peptidase family M20/M25/M40 84 462 1.9E-33 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_02800 ca42411b6de2c7251352699664069f44 466 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 114 152 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BEN31_11015 899ab001cc1d4a50dfa4be432e1128e1 407 Gene3D G3DSA:1.20.1530.20 2 386 1.6E-62 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BEN31_11015 899ab001cc1d4a50dfa4be432e1128e1 407 Pfam PF00999 Sodium/hydrogen exchanger family 12 377 2.8E-59 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BEN31_08120 505945f66c2df8ccbeb69a737609bf0f 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 4.5E-33 T 12-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 BEN31_08120 505945f66c2df8ccbeb69a737609bf0f 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.5E-29 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN31_08120 505945f66c2df8ccbeb69a737609bf0f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.2E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN31_08120 505945f66c2df8ccbeb69a737609bf0f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.2E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN31_08120 505945f66c2df8ccbeb69a737609bf0f 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.2E-24 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN31_08120 505945f66c2df8ccbeb69a737609bf0f 89 PIRSF PIRSF004669 1 89 6.4E-35 T 12-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 BEN31_00080 9daa0cfe186417c36b30df3226eb76a9 186 SUPERFAMILY SSF53098 8 171 1.59E-8 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_00080 9daa0cfe186417c36b30df3226eb76a9 186 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 160 172 7.8E-6 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN31_00080 9daa0cfe186417c36b30df3226eb76a9 186 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 128 147 7.8E-6 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN31_00080 9daa0cfe186417c36b30df3226eb76a9 186 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 10 23 7.8E-6 T 12-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 BEN31_00080 9daa0cfe186417c36b30df3226eb76a9 186 Gene3D G3DSA:3.30.420.10 9 177 2.0E-25 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_02805 6ae1009c9e649753a7096bfd31ff0533 208 Gene3D G3DSA:3.40.50.880 1 204 1.7E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_02805 6ae1009c9e649753a7096bfd31ff0533 208 SUPERFAMILY SSF52317 2 168 9.73E-21 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_02805 6ae1009c9e649753a7096bfd31ff0533 208 Pfam PF03575 Peptidase family S51 11 202 4.7E-47 T 12-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 BEN31_04105 59fbf4e612f2b6c3dfe6bd71201ed6a7 188 PIRSF PIRSF016661 1 179 3.4E-40 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BEN31_04105 59fbf4e612f2b6c3dfe6bd71201ed6a7 188 Gene3D G3DSA:1.10.1760.20 1 177 2.6E-43 T 12-10-2018 BEN31_04105 59fbf4e612f2b6c3dfe6bd71201ed6a7 188 Pfam PF02632 BioY family 29 170 2.0E-30 T 12-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 SUPERFAMILY SSF55920 3 248 5.5E-70 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 4.1E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 4.1E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 4.1E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 4.1E-19 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 Gene3D G3DSA:3.90.230.10 1 249 1.1E-85 T 12-10-2018 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 Pfam PF00557 Metallopeptidase family M24 11 240 2.9E-44 T 12-10-2018 IPR000994 Peptidase M24 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 248 1.5E-97 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_12120 760ccc9e3182c330a3e8fc5d331b0b9d 249 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 35.977 T 12-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_05670 23ca351ac693f6d93247485955add308 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 169 2.6E-54 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BEN31_05670 23ca351ac693f6d93247485955add308 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 195 4.8E-70 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BEN31_05670 23ca351ac693f6d93247485955add308 197 Gene3D G3DSA:1.10.10.10 3 85 2.2E-27 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05670 23ca351ac693f6d93247485955add308 197 PIRSF PIRSF019345 2 195 2.4E-54 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BEN31_05670 23ca351ac693f6d93247485955add308 197 SUPERFAMILY SSF46785 3 83 3.63E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_05670 23ca351ac693f6d93247485955add308 197 Hamap MF_01804 Segregation and condensation protein B [scpB]. 6 185 34.553 T 12-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 BEN31_05670 23ca351ac693f6d93247485955add308 197 SUPERFAMILY SSF46785 87 160 4.54E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_05670 23ca351ac693f6d93247485955add308 197 Gene3D G3DSA:1.10.10.10 86 181 3.3E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 343 1.1E-7 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 Pfam PF07730 Histidine kinase 149 215 2.6E-18 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 SMART SM00387 253 346 6.6E-6 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 SMART SM00304 73 125 8.9E-7 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 Gene3D G3DSA:3.30.565.10 214 347 2.2E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 Gene3D G3DSA:1.10.287.130 74 201 9.0E-7 T 12-10-2018 BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 SUPERFAMILY SSF55874 220 343 1.02E-18 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01225 8fa312a7b115b3dc4083e743594e903a 354 PIRSF PIRSF037431 7 352 7.3E-124 T 12-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 BEN31_00010 601459e10b4f6e055187899d3149f72e 333 Pfam PF13155 Toprim-like 212 297 1.7E-9 T 12-10-2018 BEN31_00010 601459e10b4f6e055187899d3149f72e 333 SUPERFAMILY SSF57783 9 99 6.12E-8 T 12-10-2018 BEN31_00010 601459e10b4f6e055187899d3149f72e 333 Gene3D G3DSA:3.40.1360.10 194 314 2.1E-14 T 12-10-2018 BEN31_00010 601459e10b4f6e055187899d3149f72e 333 SUPERFAMILY SSF56731 128 312 1.31E-9 T 12-10-2018 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 Pfam PF14559 Tetratricopeptide repeat 162 226 3.4E-10 T 12-10-2018 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 SMART SM00028 89 122 370.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 SMART SM00028 54 87 120.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 SMART SM00028 20 53 8.4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 SMART SM00028 152 185 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 SMART SM00028 186 219 2.0E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 SUPERFAMILY SSF48452 20 238 1.04E-21 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 Gene3D G3DSA:1.25.40.10 145 326 1.1E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_18605 c0e64c7879eeef0bebd9a6a567b120e4 486 Gene3D G3DSA:1.25.40.10 7 136 2.4E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 SUPERFAMILY SSF50156 335 450 3.42E-21 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 PRINTS PR00834 HtrA/DegQ protease family signature 284 301 1.2E-40 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 PRINTS PR00834 HtrA/DegQ protease family signature 306 323 1.2E-40 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 PRINTS PR00834 HtrA/DegQ protease family signature 398 410 1.2E-40 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 PRINTS PR00834 HtrA/DegQ protease family signature 202 222 1.2E-40 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 PRINTS PR00834 HtrA/DegQ protease family signature 181 193 1.2E-40 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 PRINTS PR00834 HtrA/DegQ protease family signature 243 267 1.2E-40 T 12-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 SUPERFAMILY SSF50494 129 348 1.33E-57 T 12-10-2018 IPR009003 Peptidase S1, PA clan BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 Pfam PF13180 PDZ domain 351 450 6.3E-19 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 Gene3D G3DSA:2.40.10.10 234 350 1.2E-42 T 12-10-2018 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 SMART SM00228 351 441 3.7E-14 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 Gene3D G3DSA:2.40.10.10 115 231 6.2E-27 T 12-10-2018 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 Gene3D G3DSA:2.30.42.10 351 456 1.0E-26 T 12-10-2018 BEN31_01275 deb86ff45de17ede7a2bd2001b609368 456 Pfam PF13365 Trypsin-like peptidase domain 169 313 3.2E-32 T 12-10-2018 BEN31_04055 58f7a07d958d7d42ab769caff43ff937 43 Pfam PF13056 Protein of unknown function (DUF3918) 1 43 3.5E-22 T 12-10-2018 IPR025029 Protein of unknown function DUF3918 BEN31_15095 dc622325f416698a7456af9dc95767c1 201 SUPERFAMILY SSF53335 7 200 4.22E-37 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_15095 dc622325f416698a7456af9dc95767c1 201 Gene3D G3DSA:3.40.50.150 6 201 6.9E-47 T 12-10-2018 BEN31_15095 dc622325f416698a7456af9dc95767c1 201 Pfam PF05175 Methyltransferase small domain 28 197 2.0E-50 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BEN31_16135 e81544988683d9c6e4aecd4e916b2f9f 56 Pfam PF14116 YyzF-like protein 7 54 4.9E-19 T 12-10-2018 IPR025626 YyzF-like protein BEN31_16135 e81544988683d9c6e4aecd4e916b2f9f 56 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 6 53 3.1E-20 T 12-10-2018 IPR025626 YyzF-like protein BEN31_16165 c8ccbca4dd24c3b4425e7e5194508441 1030 Gene3D G3DSA:3.40.50.300 848 1029 3.1E-24 T 12-10-2018 BEN31_16165 c8ccbca4dd24c3b4425e7e5194508441 1030 SUPERFAMILY SSF52540 260 1009 1.76E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16165 c8ccbca4dd24c3b4425e7e5194508441 1030 Pfam PF13087 AAA domain 893 1007 6.2E-13 T 12-10-2018 BEN31_16165 c8ccbca4dd24c3b4425e7e5194508441 1030 Pfam PF13086 AAA domain 262 791 7.5E-7 T 12-10-2018 BEN31_16940 5934d6e1000fe5457d09badb58ce972b 214 SUPERFAMILY SSF161098 9 197 7.59E-48 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_16940 5934d6e1000fe5457d09badb58ce972b 214 Gene3D G3DSA:1.10.3720.10 1 213 1.3E-55 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_16940 5934d6e1000fe5457d09badb58ce972b 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 106 2.9E-28 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_16940 5934d6e1000fe5457d09badb58ce972b 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 211 2.0E-18 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_10345 8c55abf74fef140e3cb7527a39c0cb75 316 SUPERFAMILY SSF161098 91 303 1.83E-19 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_10345 8c55abf74fef140e3cb7527a39c0cb75 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 315 1.0E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_10345 8c55abf74fef140e3cb7527a39c0cb75 316 Gene3D G3DSA:1.10.3720.10 86 310 7.8E-24 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04880 1790db2d32583119a0aaa5645d046601 639 Gene3D G3DSA:3.40.720.10 238 546 2.4E-74 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_04880 1790db2d32583119a0aaa5645d046601 639 PIRSF PIRSF005091 1 620 4.0E-197 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like BEN31_04880 1790db2d32583119a0aaa5645d046601 639 SUPERFAMILY SSF53649 243 619 5.05E-69 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_04880 1790db2d32583119a0aaa5645d046601 639 Pfam PF00884 Sulfatase 245 536 1.0E-30 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BEN31_01740 47d840384ac75d68938a7eb74f41fae2 183 SUPERFAMILY SSF52499 3 182 5.76E-51 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_01740 47d840384ac75d68938a7eb74f41fae2 183 Gene3D G3DSA:3.40.50.850 1 183 8.5E-53 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_01740 47d840384ac75d68938a7eb74f41fae2 183 Pfam PF00857 Isochorismatase family 4 179 1.2E-34 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BEN31_15630 5e4f503d1f1b26a72dd86fa08454037b 107 SUPERFAMILY SSF82607 12 106 6.41E-35 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BEN31_15630 5e4f503d1f1b26a72dd86fa08454037b 107 Pfam PF02575 YbaB/EbfC DNA-binding family 12 102 3.8E-35 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN31_15630 5e4f503d1f1b26a72dd86fa08454037b 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 2.8E-36 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN31_15630 5e4f503d1f1b26a72dd86fa08454037b 107 PIRSF PIRSF004555 4 107 5.4E-41 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN31_15630 5e4f503d1f1b26a72dd86fa08454037b 107 Gene3D G3DSA:3.30.1310.10 2 107 6.3E-40 T 12-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily BEN31_15630 5e4f503d1f1b26a72dd86fa08454037b 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 100 23.465 T 12-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 Pfam PF07690 Major Facilitator Superfamily 10 322 8.4E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 SUPERFAMILY SSF103473 4 381 1.57E-61 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 Gene3D G3DSA:1.20.1250.20 2 186 9.3E-30 T 12-10-2018 BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 PRINTS PR01035 Tetracycline resistance protein signature 42 61 3.7E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 PRINTS PR01035 Tetracycline resistance protein signature 12 28 3.7E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 PRINTS PR01035 Tetracycline resistance protein signature 100 121 3.7E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 PRINTS PR01035 Tetracycline resistance protein signature 266 287 3.7E-6 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_11905 20d3a04f93bf8703c913df19cebd270b 395 Gene3D G3DSA:1.20.1250.20 195 381 2.0E-16 T 12-10-2018 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 148 359 4.6E-53 T 12-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 SUPERFAMILY SSF48179 201 367 1.8E-39 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 371 39.683 T 12-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 Gene3D G3DSA:3.40.50.720 1 202 1.8E-70 T 12-10-2018 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 122 1.7E-21 T 12-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 Gene3D G3DSA:1.10.1040.10 204 372 1.9E-57 T 12-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 PRINTS PR00084 Mannitol dehydrogenase signature 113 126 2.9E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 2.9E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 PRINTS PR00084 Mannitol dehydrogenase signature 149 162 2.9E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 PRINTS PR00084 Mannitol dehydrogenase signature 167 182 2.9E-18 T 12-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 149 161 - T 12-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 BEN31_13690 e484fdc075ae2b1ee521a523157340a9 373 SUPERFAMILY SSF51735 1 199 4.16E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17360 5c65425e90bf5965fb6872c227234aff 61 SUPERFAMILY SSF55331 2 60 8.25E-20 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily BEN31_17360 5c65425e90bf5965fb6872c227234aff 61 Pfam PF01361 Tautomerase enzyme 2 60 1.3E-23 T 12-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 BEN31_17360 5c65425e90bf5965fb6872c227234aff 61 Gene3D G3DSA:3.30.429.10 2 60 1.1E-26 T 12-10-2018 IPR014347 Tautomerase/MIF superfamily BEN31_17360 5c65425e90bf5965fb6872c227234aff 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 8.7E-27 T 12-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 BEN31_18030 167db333f35aa4eadd636f63e01f1fe6 151 Gene3D G3DSA:3.40.630.30 1 151 2.1E-40 T 12-10-2018 BEN31_18030 167db333f35aa4eadd636f63e01f1fe6 151 SUPERFAMILY SSF55729 4 151 1.36E-23 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_18030 167db333f35aa4eadd636f63e01f1fe6 151 Pfam PF00583 Acetyltransferase (GNAT) family 39 129 1.7E-11 T 12-10-2018 IPR000182 GNAT domain BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 Gene3D G3DSA:1.20.140.10 227 377 8.5E-41 T 12-10-2018 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 330 349 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 115 9.5E-25 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 Gene3D G3DSA:2.40.110.10 118 226 8.4E-30 T 12-10-2018 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 SUPERFAMILY SSF56645 6 228 4.32E-62 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 209 3.7E-21 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 SUPERFAMILY SSF47203 220 375 4.67E-42 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 Gene3D G3DSA:1.10.540.10 2 117 1.1E-28 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN31_12480 bc02ad67672ea5e3a27f5f8394305634 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 222 369 2.4E-38 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN31_18805 37f63a285b915267374e5046ad43aeec 157 Pfam PF13152 Protein of unknown function (DUF3967) 125 156 1.3E-9 T 12-10-2018 IPR025052 Domain of unknown function DUF3967 BEN31_18805 37f63a285b915267374e5046ad43aeec 157 Pfam PF08279 HTH domain 4 36 3.8E-6 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_18805 37f63a285b915267374e5046ad43aeec 157 Gene3D G3DSA:1.10.1660.10 5 75 2.7E-9 T 12-10-2018 BEN31_18805 37f63a285b915267374e5046ad43aeec 157 SUPERFAMILY SSF46955 10 121 2.38E-9 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_18780 37f63a285b915267374e5046ad43aeec 157 Pfam PF13152 Protein of unknown function (DUF3967) 125 156 1.3E-9 T 12-10-2018 IPR025052 Domain of unknown function DUF3967 BEN31_18780 37f63a285b915267374e5046ad43aeec 157 Pfam PF08279 HTH domain 4 36 3.8E-6 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_18780 37f63a285b915267374e5046ad43aeec 157 Gene3D G3DSA:1.10.1660.10 5 75 2.7E-9 T 12-10-2018 BEN31_18780 37f63a285b915267374e5046ad43aeec 157 SUPERFAMILY SSF46955 10 121 2.38E-9 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_01470 82c91c10ec16efe1b98913ca40166874 386 Pfam PF13556 PucR C-terminal helix-turn-helix domain 319 377 3.1E-22 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_01470 82c91c10ec16efe1b98913ca40166874 386 Gene3D G3DSA:1.10.10.2840 255 381 1.8E-19 T 12-10-2018 BEN31_18320 3cde6853d27ac720c9a1f8760f046dc5 504 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 222 493 1.2E-52 T 12-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 BEN31_18320 3cde6853d27ac720c9a1f8760f046dc5 504 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 12 105 6.5E-26 T 12-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 BEN31_18320 3cde6853d27ac720c9a1f8760f046dc5 504 Pfam PF07196 Flagellin hook IN motif 122 171 6.4E-8 T 12-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 BEN31_12600 b56dd52e14904e3314fe7609ca028b83 281 Pfam PF00583 Acetyltransferase (GNAT) family 151 232 5.8E-6 T 12-10-2018 IPR000182 GNAT domain BEN31_12600 b56dd52e14904e3314fe7609ca028b83 281 SUPERFAMILY SSF55729 127 277 3.54E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_12600 b56dd52e14904e3314fe7609ca028b83 281 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 14 277 1.9E-91 T 12-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 BEN31_12600 b56dd52e14904e3314fe7609ca028b83 281 Gene3D G3DSA:3.40.630.30 118 276 5.0E-15 T 12-10-2018 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 Gene3D G3DSA:2.40.100.10 1 145 3.3E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 SUPERFAMILY SSF50891 10 137 2.63E-47 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 PIRSF PIRSF001467 2 145 5.5E-41 T 12-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 2.1E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 2.1E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 2.1E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 2.1E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 2.1E-25 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 12-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 BEN31_05615 ce463ebebf7a12cea402c6255f881698 145 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 136 2.8E-41 T 12-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 BEN31_15335 d04eb93c240525e1edb976860d33bee7 302 Gene3D G3DSA:3.10.50.40 161 263 4.2E-30 T 12-10-2018 BEN31_15335 d04eb93c240525e1edb976860d33bee7 302 Pfam PF13624 SurA N-terminal domain 2 129 3.0E-8 T 12-10-2018 BEN31_15335 d04eb93c240525e1edb976860d33bee7 302 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 189 210 - T 12-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 BEN31_15335 d04eb93c240525e1edb976860d33bee7 302 Gene3D G3DSA:1.10.4030.30 20 272 4.2E-30 T 12-10-2018 BEN31_15335 d04eb93c240525e1edb976860d33bee7 302 SUPERFAMILY SSF54534 153 252 1.18E-18 T 12-10-2018 BEN31_15335 d04eb93c240525e1edb976860d33bee7 302 SUPERFAMILY SSF109998 45 189 7.06E-23 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily BEN31_15335 d04eb93c240525e1edb976860d33bee7 302 Pfam PF13145 PPIC-type PPIASE domain 141 267 8.7E-20 T 12-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 BEN31_00460 0c542d5bfdc587e59341f9253fdc3c5c 624 Pfam PF13727 CoA-binding domain 60 235 4.1E-15 T 12-10-2018 BEN31_00460 0c542d5bfdc587e59341f9253fdc3c5c 624 Gene3D G3DSA:3.90.25.30 443 542 1.0E-114 T 12-10-2018 BEN31_00460 0c542d5bfdc587e59341f9253fdc3c5c 624 SUPERFAMILY SSF51735 277 542 4.41E-55 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_00460 0c542d5bfdc587e59341f9253fdc3c5c 624 Gene3D G3DSA:3.40.50.720 278 556 1.0E-114 T 12-10-2018 BEN31_00460 0c542d5bfdc587e59341f9253fdc3c5c 624 Gene3D G3DSA:3.40.50.720 135 261 2.7E-33 T 12-10-2018 BEN31_00460 0c542d5bfdc587e59341f9253fdc3c5c 624 Pfam PF02719 Polysaccharide biosynthesis protein 280 561 1.9E-120 T 12-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain BEN31_00460 0c542d5bfdc587e59341f9253fdc3c5c 624 SUPERFAMILY SSF51735 138 267 1.1E-13 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 Gene3D G3DSA:3.30.1330.90 13 136 1.4E-20 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 SUPERFAMILY SSF55021 137 218 3.36E-16 T 12-10-2018 BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 SUPERFAMILY SSF143548 19 137 2.35E-30 T 12-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 PIRSF PIRSF036692 1 220 1.2E-101 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 1.1E-103 T 12-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 Pfam PF01842 ACT domain 149 210 1.1E-10 T 12-10-2018 IPR002912 ACT domain BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 Pfam PF03315 Serine dehydratase beta chain 5 72 2.3E-10 T 12-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BEN31_08375 61ea037d222672f3a8d95bbd79c32248 220 Gene3D G3DSA:3.30.70.260 139 217 1.5E-13 T 12-10-2018 BEN31_07195 4df78bd29bac6b35bc9de6ffbe00383b 308 Gene3D G3DSA:3.40.50.1820 17 308 3.6E-70 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_07195 4df78bd29bac6b35bc9de6ffbe00383b 308 SUPERFAMILY SSF53474 81 308 5.36E-37 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_07195 4df78bd29bac6b35bc9de6ffbe00383b 308 Pfam PF07859 alpha/beta hydrolase fold 87 288 6.3E-38 T 12-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 Pfam PF00107 Zinc-binding dehydrogenase 157 292 7.2E-25 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 SUPERFAMILY SSF50129 1 142 8.59E-45 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 Gene3D G3DSA:3.40.50.720 125 302 4.6E-136 T 12-10-2018 BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 SUPERFAMILY SSF50129 286 332 1.74E-6 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 Gene3D G3DSA:3.90.180.10 9 331 4.6E-136 T 12-10-2018 BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 Pfam PF16884 N-terminal domain of oxidoreductase 5 112 2.1E-42 T 12-10-2018 BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 SMART SM00829 15 331 1.4E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_12220 6393e42734f4dd83f2fab1fad2e7d6f9 334 SUPERFAMILY SSF51735 123 298 4.53E-49 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_10995 62e6d063db81de2e6bf670920bb279d6 62 Pfam PF14120 YhzD-like protein 2 62 6.7E-28 T 12-10-2018 IPR025544 YhzD-like protein BEN31_16105 81b0a25e398a68ad0f6dd478149e99a7 293 SMART SM00382 26 199 1.0E-4 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16105 81b0a25e398a68ad0f6dd478149e99a7 293 Gene3D G3DSA:3.40.50.300 1 229 1.0E-52 T 12-10-2018 BEN31_16105 81b0a25e398a68ad0f6dd478149e99a7 293 SUPERFAMILY SSF52540 2 212 2.55E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16105 81b0a25e398a68ad0f6dd478149e99a7 293 Pfam PF00005 ABC transporter 18 156 1.8E-24 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_13460 e04ce2fb7d9b49a7cc74f7733c8254fe 365 Gene3D G3DSA:3.40.190.170 44 347 1.4E-88 T 12-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily BEN31_13460 e04ce2fb7d9b49a7cc74f7733c8254fe 365 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 49 304 1.6E-91 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BEN31_13460 e04ce2fb7d9b49a7cc74f7733c8254fe 365 PIRSF PIRSF006470 16 349 3.8E-122 T 12-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 BEN31_13460 e04ce2fb7d9b49a7cc74f7733c8254fe 365 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 333 1.0E-94 T 12-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 BEN31_11430 8d6aa3c709cff7c41842ba56bb22cef2 431 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 9 425 2.8E-211 T 12-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 BEN31_11430 8d6aa3c709cff7c41842ba56bb22cef2 431 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 10 425 3.5E-148 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_11430 8d6aa3c709cff7c41842ba56bb22cef2 431 SUPERFAMILY SSF53383 8 425 4.87E-129 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_11430 8d6aa3c709cff7c41842ba56bb22cef2 431 Gene3D G3DSA:3.90.1150.10 294 431 2.3E-52 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_11430 8d6aa3c709cff7c41842ba56bb22cef2 431 Gene3D G3DSA:3.40.640.10 5 290 3.1E-104 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_11430 8d6aa3c709cff7c41842ba56bb22cef2 431 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_11430 8d6aa3c709cff7c41842ba56bb22cef2 431 PIRSF PIRSF001434 1 429 2.6E-129 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_07050 486b69018c835f9a8c8915248dfc6860 226 SUPERFAMILY SSF46785 151 221 3.72E-11 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07050 486b69018c835f9a8c8915248dfc6860 226 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 2.0E-15 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN31_07050 486b69018c835f9a8c8915248dfc6860 226 Gene3D G3DSA:2.60.120.10 12 155 4.1E-20 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_07050 486b69018c835f9a8c8915248dfc6860 226 Pfam PF13545 Crp-like helix-turn-helix domain 154 218 3.3E-12 T 12-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 BEN31_07050 486b69018c835f9a8c8915248dfc6860 226 Gene3D G3DSA:1.10.10.10 156 224 1.6E-13 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07050 486b69018c835f9a8c8915248dfc6860 226 SUPERFAMILY SSF51206 23 141 2.09E-24 T 12-10-2018 IPR018490 Cyclic nucleotide-binding-like BEN31_07050 486b69018c835f9a8c8915248dfc6860 226 SMART SM00100 15 133 7.6E-7 T 12-10-2018 IPR000595 Cyclic nucleotide-binding domain BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 SUPERFAMILY SSF116726 541 609 6.28E-8 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 Gene3D G3DSA:1.20.1530.20 3 399 3.1E-69 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 Gene3D G3DSA:3.40.50.720 400 534 1.8E-14 T 12-10-2018 BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 Pfam PF02254 TrkA-N domain 406 516 1.2E-9 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 SUPERFAMILY SSF51735 403 517 7.4E-12 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 Pfam PF00999 Sodium/hydrogen exchanger family 10 393 2.6E-75 T 12-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 Pfam PF02080 TrkA-C domain 553 610 5.7E-9 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BEN31_10215 5493e4186e96e9f19e57c4b2ff92d116 613 Gene3D G3DSA:3.30.70.1450 535 613 5.3E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_09770 62b13fb3bbb7dade9e8f4265bddae2ad 313 Gene3D G3DSA:3.50.30.60 168 301 6.6E-42 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_09770 62b13fb3bbb7dade9e8f4265bddae2ad 313 SUPERFAMILY SSF141986 142 299 2.22E-42 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_09770 62b13fb3bbb7dade9e8f4265bddae2ad 313 Gene3D G3DSA:3.40.50.10740 3 159 1.1E-56 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BEN31_09770 62b13fb3bbb7dade9e8f4265bddae2ad 313 PIRSF PIRSF028757 3 306 3.7E-88 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_09770 62b13fb3bbb7dade9e8f4265bddae2ad 313 Pfam PF02016 LD-carboxypeptidase 14 293 6.1E-82 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_09770 62b13fb3bbb7dade9e8f4265bddae2ad 313 SUPERFAMILY SSF52317 3 162 2.84E-51 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_05200 466823cc2d89595bb11f006acd7ab872 245 Gene3D G3DSA:3.20.20.190 1 244 3.4E-78 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BEN31_05200 466823cc2d89595bb11f006acd7ab872 245 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 235 2.0E-45 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BEN31_05200 466823cc2d89595bb11f006acd7ab872 245 SUPERFAMILY SSF51695 2 241 6.07E-72 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BEN31_16250 fb21abce9f0f39d25f4ff82ba3a513b9 393 SUPERFAMILY SSF103473 10 390 2.75E-49 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_16250 fb21abce9f0f39d25f4ff82ba3a513b9 393 Pfam PF07690 Major Facilitator Superfamily 13 271 4.8E-28 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_16250 fb21abce9f0f39d25f4ff82ba3a513b9 393 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_16250 fb21abce9f0f39d25f4ff82ba3a513b9 393 Gene3D G3DSA:1.20.1250.20 8 193 2.4E-29 T 12-10-2018 BEN31_16250 fb21abce9f0f39d25f4ff82ba3a513b9 393 Gene3D G3DSA:1.20.1250.20 211 390 2.5E-15 T 12-10-2018 BEN31_08500 c2d4c3300c806baef5b0259065971014 197 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 192 3.7E-90 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BEN31_08500 c2d4c3300c806baef5b0259065971014 197 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 39.431 T 12-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 BEN31_08500 c2d4c3300c806baef5b0259065971014 197 SUPERFAMILY SSF52540 26 194 8.86E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08500 c2d4c3300c806baef5b0259065971014 197 Gene3D G3DSA:3.40.50.300 3 196 2.7E-78 T 12-10-2018 BEN31_08500 c2d4c3300c806baef5b0259065971014 197 Pfam PF01583 Adenylylsulphate kinase 27 178 3.4E-74 T 12-10-2018 BEN31_05240 bc19dc27905020fa5073284e21db385d 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 4.9E-52 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_05240 bc19dc27905020fa5073284e21db385d 327 Gene3D G3DSA:3.40.50.970 1 192 9.0E-94 T 12-10-2018 BEN31_05240 bc19dc27905020fa5073284e21db385d 327 SUPERFAMILY SSF52518 2 204 2.36E-74 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_05240 bc19dc27905020fa5073284e21db385d 327 SMART SM00861 4 179 2.8E-71 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_05240 bc19dc27905020fa5073284e21db385d 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 1.6E-39 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BEN31_05240 bc19dc27905020fa5073284e21db385d 327 Gene3D G3DSA:3.40.50.920 193 326 2.8E-41 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_05240 bc19dc27905020fa5073284e21db385d 327 SUPERFAMILY SSF52922 188 324 1.44E-38 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_16850 037aa22818796c182628be90209078a0 456 SUPERFAMILY SSF53223 14 205 6.72E-76 T 12-10-2018 BEN31_16850 037aa22818796c182628be90209078a0 456 Gene3D G3DSA:1.10.285.10 14 391 3.7E-168 T 12-10-2018 BEN31_16850 037aa22818796c182628be90209078a0 456 Gene3D G3DSA:3.40.50.10860 63 198 3.7E-168 T 12-10-2018 BEN31_16850 037aa22818796c182628be90209078a0 456 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 65 193 1.7E-52 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_16850 037aa22818796c182628be90209078a0 456 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 122 136 1.9E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_16850 037aa22818796c182628be90209078a0 456 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 380 391 1.9E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_16850 037aa22818796c182628be90209078a0 456 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 244 264 1.9E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_16850 037aa22818796c182628be90209078a0 456 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 202 224 1.9E-30 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_16850 037aa22818796c182628be90209078a0 456 SMART SM00839 213 454 1.9E-91 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_16850 037aa22818796c182628be90209078a0 456 SUPERFAMILY SSF51735 211 455 3.0E-74 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_16850 037aa22818796c182628be90209078a0 456 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 211 454 3.0E-89 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_16850 037aa22818796c182628be90209078a0 456 PIRSF PIRSF000185 29 456 1.3E-126 T 12-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 BEN31_16850 037aa22818796c182628be90209078a0 456 Gene3D G3DSA:1.10.285.10 392 456 7.4E-10 T 12-10-2018 BEN31_16850 037aa22818796c182628be90209078a0 456 Gene3D G3DSA:3.40.50.720 218 381 3.7E-168 T 12-10-2018 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 Gene3D G3DSA:3.30.540.10 2 143 4.7E-43 T 12-10-2018 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 1.2E-35 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.2E-35 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.2E-35 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.2E-35 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 1.2E-35 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.2E-35 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 Pfam PF00459 Inositol monophosphatase family 7 257 1.2E-60 T 12-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 12-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 12-10-2018 IPR020583 Inositol monophosphatase, metal-binding site BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 Gene3D G3DSA:3.40.190.80 144 267 6.3E-32 T 12-10-2018 BEN31_08965 304501aaf5d4fd21961cd0c60ef16645 268 SUPERFAMILY SSF56655 4 258 1.57E-71 T 12-10-2018 BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 Gene3D G3DSA:3.90.105.10 28 183 6.0E-96 T 12-10-2018 BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 SMART SM00852 189 328 6.1E-36 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 Gene3D G3DSA:2.40.340.10 338 412 6.0E-16 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 Gene3D G3DSA:3.40.980.10 184 326 6.0E-96 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 176 3.3E-39 T 12-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 SUPERFAMILY SSF63867 339 413 4.06E-18 T 12-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 Pfam PF00994 Probable molybdopterin binding domain 189 326 1.3E-24 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 SUPERFAMILY SSF53218 186 329 2.49E-35 T 12-10-2018 IPR036425 MoaB/Mog-like domain superfamily BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 324 3.8E-29 T 12-10-2018 IPR001453 MoaB/Mog domain BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 Gene3D G3DSA:2.170.190.11 50 150 6.0E-96 T 12-10-2018 BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 SUPERFAMILY SSF63882 7 185 5.1E-49 T 12-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_09155 0b4c6c84aafd843368cb071dc722dcee 425 Pfam PF03454 MoeA C-terminal region (domain IV) 342 412 4.6E-20 T 12-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 Pfam PF01261 Xylose isomerase-like TIM barrel 22 237 8.5E-40 T 12-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 Gene3D G3DSA:3.20.20.150 1 297 1.4E-101 T 12-10-2018 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 285 42.065 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 282 1.7E-102 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 SMART SM00518 3 285 4.2E-130 T 12-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 12-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 BEN31_04735 a416fa3309e2fcdbffd108f6472c9ed7 297 SUPERFAMILY SSF51658 2 294 3.01E-101 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BEN31_08300 6297f9c0ce5433153b18b8897d799c62 128 Pfam PF11068 YlqD protein 1 126 5.5E-36 T 12-10-2018 IPR021297 YlqD protein BEN31_03110 4d4ad13afe6da1afe9e8427ffef7cc6c 333 Gene3D G3DSA:3.40.1750.20 169 235 2.9E-89 T 12-10-2018 BEN31_03110 4d4ad13afe6da1afe9e8427ffef7cc6c 333 SUPERFAMILY SSF52096 54 266 6.96E-41 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_03110 4d4ad13afe6da1afe9e8427ffef7cc6c 333 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 58 277 3.8E-85 T 12-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 BEN31_03110 4d4ad13afe6da1afe9e8427ffef7cc6c 333 Pfam PF01343 Peptidase family S49 129 278 2.0E-58 T 12-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 BEN31_03110 4d4ad13afe6da1afe9e8427ffef7cc6c 333 Gene3D G3DSA:3.90.226.10 60 274 2.9E-89 T 12-10-2018 BEN31_06875 c477e15b95bb85d2fbe7ad1c8e5a1a25 455 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 422 3.6E-94 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_06875 c477e15b95bb85d2fbe7ad1c8e5a1a25 455 PIRSF PIRSF006603 3 454 2.3E-126 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_06875 c477e15b95bb85d2fbe7ad1c8e5a1a25 455 Pfam PF01554 MatE 19 177 7.9E-39 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_06875 c477e15b95bb85d2fbe7ad1c8e5a1a25 455 Pfam PF01554 MatE 248 409 3.9E-31 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_02880 dfc19b3f751d6cc30c71abff0c003a4c 270 Pfam PF07285 Protein of unknown function (DUF1444) 4 268 6.4E-131 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 BEN31_02880 dfc19b3f751d6cc30c71abff0c003a4c 270 Hamap MF_01548 UPF0354 protein . 4 269 47.047 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 BEN31_02880 dfc19b3f751d6cc30c71abff0c003a4c 270 PIRSF PIRSF012562 2 269 5.2E-134 T 12-10-2018 IPR010838 Protein of unknown unction DUF1444 BEN31_04065 43aaa130e251f2aad8a9f57e7b77216a 217 SUPERFAMILY SSF161098 13 199 3.92E-46 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04065 43aaa130e251f2aad8a9f57e7b77216a 217 Gene3D G3DSA:1.10.3720.10 1 216 5.0E-55 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04065 43aaa130e251f2aad8a9f57e7b77216a 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 1.1E-27 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_04065 43aaa130e251f2aad8a9f57e7b77216a 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 214 4.6E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_07850 150988eab62b2aa8e8128d0d7f942018 426 SUPERFAMILY SSF63411 6 224 2.5E-26 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN31_07850 150988eab62b2aa8e8128d0d7f942018 426 Gene3D G3DSA:3.30.830.10 6 234 6.3E-63 T 12-10-2018 BEN31_07850 150988eab62b2aa8e8128d0d7f942018 426 Gene3D G3DSA:3.30.830.10 239 425 6.6E-42 T 12-10-2018 BEN31_07850 150988eab62b2aa8e8128d0d7f942018 426 Pfam PF05193 Peptidase M16 inactive domain 185 357 5.1E-28 T 12-10-2018 IPR007863 Peptidase M16, C-terminal BEN31_07850 150988eab62b2aa8e8128d0d7f942018 426 SUPERFAMILY SSF63411 247 414 3.17E-30 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SUPERFAMILY SSF52335 936 1054 6.67E-32 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.577 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SUPERFAMILY SSF52440 1 127 8.78E-50 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Gene3D G3DSA:3.30.470.20 120 401 1.7E-124 T 12-10-2018 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SMART SM01096 420 540 2.5E-71 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Gene3D G3DSA:3.40.50.1380 930 1063 3.9E-37 T 12-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.225 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Gene3D G3DSA:1.10.1030.10 402 546 3.8E-47 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 12-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SUPERFAMILY SSF56059 666 927 1.1E-102 T 12-10-2018 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SMART SM00851 949 1036 5.4E-27 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Gene3D G3DSA:3.40.50.20 1 116 2.4E-48 T 12-10-2018 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Pfam PF02142 MGS-like domain 951 1036 5.7E-19 T 12-10-2018 IPR011607 Methylglyoxal synthase-like domain BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SUPERFAMILY SSF48108 395 546 3.53E-51 T 12-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SUPERFAMILY SSF56059 128 399 1.29E-108 T 12-10-2018 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SMART SM01209 674 836 0.0027 T 12-10-2018 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 6.5E-42 T 12-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Gene3D G3DSA:3.30.470.20 659 929 5.2E-110 T 12-10-2018 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.1E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.1E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.1E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.1E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.1E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.1E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.1E-63 T 12-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Gene3D G3DSA:3.40.50.20 547 655 1.7E-46 T 12-10-2018 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 2.3E-78 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 667 866 2.2E-41 T 12-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 BEN31_08540 c953279b70a984567c3aaf60ba887c48 1071 SUPERFAMILY SSF52440 548 668 6.04E-48 T 12-10-2018 IPR016185 Pre-ATP-grasp domain superfamily BEN31_07415 85669c9db85bb9e4cc5caf4c537474ea 55 SUPERFAMILY SSF140500 4 53 2.49E-15 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BEN31_07415 85669c9db85bb9e4cc5caf4c537474ea 55 Gene3D G3DSA:1.20.58.990 3 54 3.8E-11 T 12-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 BEN31_07415 85669c9db85bb9e4cc5caf4c537474ea 55 Pfam PF09388 Spo0E like sporulation regulatory protein 6 47 1.9E-15 T 12-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 BEN31_10500 eaf7abc6d98a35a7dfae69b272cc0a59 285 Gene3D G3DSA:3.30.1180.10 156 284 3.1E-47 T 12-10-2018 BEN31_10500 eaf7abc6d98a35a7dfae69b272cc0a59 285 Gene3D G3DSA:3.40.50.10440 5 137 2.5E-43 T 12-10-2018 BEN31_10500 eaf7abc6d98a35a7dfae69b272cc0a59 285 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 280 1.3E-91 T 12-10-2018 IPR003797 DegV BEN31_10500 eaf7abc6d98a35a7dfae69b272cc0a59 285 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 2.4E-83 T 12-10-2018 IPR003797 DegV BEN31_10500 eaf7abc6d98a35a7dfae69b272cc0a59 285 Gene3D G3DSA:2.20.28.50 28 62 2.5E-43 T 12-10-2018 BEN31_10500 eaf7abc6d98a35a7dfae69b272cc0a59 285 SUPERFAMILY SSF82549 1 283 4.45E-88 T 12-10-2018 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 79 98 6.2E-27 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 367 381 6.2E-27 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 310 332 6.2E-27 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 449 462 6.2E-27 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 67 471 8.8E-123 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 Gene3D G3DSA:3.50.80.20 108 194 1.1E-22 T 12-10-2018 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 SUPERFAMILY SSF56601 49 493 7.75E-102 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 Gene3D G3DSA:3.40.710.10 41 107 8.8E-6 T 12-10-2018 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 Gene3D G3DSA:3.40.710.10 286 493 1.4E-56 T 12-10-2018 BEN31_06870 46a6a86a10aa9c9f5c5cea415b9637e4 494 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 41 492 3.1E-134 T 12-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 Gene3D G3DSA:2.40.50.100 2 98 1.2E-25 T 12-10-2018 BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 147 375 4.1E-80 T 12-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 SUPERFAMILY SSF47005 95 138 8.89E-11 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 Pfam PF00364 Biotin-requiring enzyme 4 76 2.8E-17 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 Pfam PF02817 e3 binding domain 101 135 9.1E-14 T 12-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 SUPERFAMILY SSF52777 148 376 1.02E-77 T 12-10-2018 BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 SUPERFAMILY SSF51230 1 91 2.49E-24 T 12-10-2018 IPR011053 Single hybrid motif BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 Gene3D G3DSA:4.10.320.10 99 137 3.6E-14 T 12-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 BEN31_13280 4c73fa1e3708322a7250aac7d52eafc2 376 Gene3D G3DSA:3.30.559.10 138 373 1.3E-81 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 TIGRFAM TIGR03333 salvage_mtnX: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase 6 218 1.4E-104 T 12-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 177 1.3E-17 T 12-10-2018 BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 SUPERFAMILY SSF56784 1 221 6.0E-56 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 Hamap MF_01680 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [mtnX]. 2 216 50.068 T 12-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 178 2.9E-38 T 12-10-2018 BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 3 186 8.7E-55 T 12-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 Gene3D G3DSA:3.40.50.1000 6 209 2.6E-69 T 12-10-2018 IPR023214 HAD superfamily BEN31_09490 36c120d95b4bb6bff05a42348183d3fd 231 Gene3D G3DSA:3.90.1470.20 15 134 2.6E-69 T 12-10-2018 BEN31_04075 4dd98fd0689eda71dc31257802b17a8e 242 PIRSF PIRSF039085 1 241 1.2E-115 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BEN31_04075 4dd98fd0689eda71dc31257802b17a8e 242 SMART SM00382 26 213 6.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_04075 4dd98fd0689eda71dc31257802b17a8e 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_04075 4dd98fd0689eda71dc31257802b17a8e 242 Gene3D G3DSA:3.40.50.300 1 241 1.3E-79 T 12-10-2018 BEN31_04075 4dd98fd0689eda71dc31257802b17a8e 242 SUPERFAMILY SSF52540 1 234 4.44E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04075 4dd98fd0689eda71dc31257802b17a8e 242 Pfam PF00005 ABC transporter 17 165 3.4E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 2.3E-27 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 PIRSF PIRSF016578 6 109 0.022 T 12-10-2018 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 PIRSF PIRSF016578 128 358 2.8E-14 T 12-10-2018 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 Gene3D G3DSA:1.20.140.10 233 369 3.9E-40 T 12-10-2018 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 SUPERFAMILY SSF56645 2 240 3.14E-77 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 Gene3D G3DSA:2.40.110.10 120 232 2.5E-45 T 12-10-2018 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 SUPERFAMILY SSF47203 227 369 7.25E-41 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 116 1.1E-29 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 Gene3D G3DSA:1.10.540.10 1 119 1.6E-34 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN31_17455 69a564d8c3296f557bd8b9a77661b25f 370 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 369 3.5E-38 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN31_00685 428aa5d1ec58a433c2c75949e2e0756b 79 Pfam PF01381 Helix-turn-helix 13 66 2.2E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00685 428aa5d1ec58a433c2c75949e2e0756b 79 Gene3D G3DSA:1.10.260.40 10 79 8.9E-10 T 12-10-2018 BEN31_00685 428aa5d1ec58a433c2c75949e2e0756b 79 SMART SM00530 11 66 1.1E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00685 428aa5d1ec58a433c2c75949e2e0756b 79 SUPERFAMILY SSF47413 10 73 7.88E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_11110 8287821b45228f402a5e3ddecc67b89b 362 Gene3D G3DSA:3.30.70.100 249 347 1.3E-16 T 12-10-2018 BEN31_11110 8287821b45228f402a5e3ddecc67b89b 362 SUPERFAMILY SSF82861 101 182 3.4E-11 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BEN31_11110 8287821b45228f402a5e3ddecc67b89b 362 SUPERFAMILY SSF50182 183 249 6.87E-18 T 12-10-2018 IPR010920 LSM domain superfamily BEN31_11110 8287821b45228f402a5e3ddecc67b89b 362 Pfam PF00924 Mechanosensitive ion channel 141 343 1.5E-63 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BEN31_11110 8287821b45228f402a5e3ddecc67b89b 362 Gene3D G3DSA:2.30.30.60 199 248 1.5E-13 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BEN31_11110 8287821b45228f402a5e3ddecc67b89b 362 SUPERFAMILY SSF82689 250 354 4.05E-19 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BEN31_02250 07eb61c1da08163766ee8909be208838 402 Pfam PF00465 Iron-containing alcohol dehydrogenase 19 385 3.6E-118 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BEN31_02250 07eb61c1da08163766ee8909be208838 402 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 273 293 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BEN31_02250 07eb61c1da08163766ee8909be208838 402 Gene3D G3DSA:1.20.1090.10 199 397 1.8E-60 T 12-10-2018 BEN31_02250 07eb61c1da08163766ee8909be208838 402 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 186 214 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BEN31_02250 07eb61c1da08163766ee8909be208838 402 SUPERFAMILY SSF56796 13 395 4.45E-120 T 12-10-2018 BEN31_02250 07eb61c1da08163766ee8909be208838 402 Gene3D G3DSA:3.40.50.1970 3 197 2.4E-59 T 12-10-2018 BEN31_12235 bb38fe4e512d08a27fa7a869ce41f072 396 Gene3D G3DSA:1.20.1250.20 14 386 1.6E-52 T 12-10-2018 BEN31_12235 bb38fe4e512d08a27fa7a869ce41f072 396 SUPERFAMILY SSF103473 7 389 1.06E-55 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_12235 bb38fe4e512d08a27fa7a869ce41f072 396 PRINTS PR01035 Tetracycline resistance protein signature 143 165 1.5E-12 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_12235 bb38fe4e512d08a27fa7a869ce41f072 396 PRINTS PR01035 Tetracycline resistance protein signature 29 45 1.5E-12 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_12235 bb38fe4e512d08a27fa7a869ce41f072 396 PRINTS PR01035 Tetracycline resistance protein signature 171 191 1.5E-12 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_12235 bb38fe4e512d08a27fa7a869ce41f072 396 Pfam PF07690 Major Facilitator Superfamily 24 332 9.0E-32 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_14650 e4189785bf9dbc928e775a39e295e476 305 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_14650 e4189785bf9dbc928e775a39e295e476 305 Pfam PF13732 Domain of unknown function (DUF4162) 217 303 9.7E-8 T 12-10-2018 IPR025302 Domain of unknown function DUF4162 BEN31_14650 e4189785bf9dbc928e775a39e295e476 305 SUPERFAMILY SSF52540 3 223 2.83E-57 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14650 e4189785bf9dbc928e775a39e295e476 305 SMART SM00382 28 210 1.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14650 e4189785bf9dbc928e775a39e295e476 305 Pfam PF00005 ABC transporter 19 162 2.9E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_14650 e4189785bf9dbc928e775a39e295e476 305 Gene3D G3DSA:3.40.50.300 2 237 1.1E-61 T 12-10-2018 BEN31_18595 28b7f622fef1f683a21ae44e33cc26ae 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 2.8E-122 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BEN31_18595 28b7f622fef1f683a21ae44e33cc26ae 252 SUPERFAMILY SSF51366 1 252 1.65E-80 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_18595 28b7f622fef1f683a21ae44e33cc26ae 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 48.805 T 12-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 BEN31_18595 28b7f622fef1f683a21ae44e33cc26ae 252 Pfam PF00977 Histidine biosynthesis protein 5 235 2.4E-86 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BEN31_18595 28b7f622fef1f683a21ae44e33cc26ae 252 Gene3D G3DSA:3.20.20.70 1 252 1.0E-105 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_09715 0780fa6f16fe5a7495207ef20c8837d9 109 Pfam PF00893 Small Multidrug Resistance protein 1 89 7.7E-19 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BEN31_09715 0780fa6f16fe5a7495207ef20c8837d9 109 Gene3D G3DSA:1.10.3730.20 1 104 2.6E-20 T 12-10-2018 BEN31_09715 0780fa6f16fe5a7495207ef20c8837d9 109 SUPERFAMILY SSF103481 6 100 1.19E-12 T 12-10-2018 BEN31_14590 ee8850d914a496d2efe341fe5368c778 293 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 43 284 4.3E-58 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BEN31_14590 ee8850d914a496d2efe341fe5368c778 293 SUPERFAMILY SSF51695 37 288 7.33E-77 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BEN31_14590 ee8850d914a496d2efe341fe5368c778 293 Gene3D G3DSA:3.20.20.190 27 292 6.5E-108 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 Gene3D G3DSA:1.10.530.10 6 153 7.3E-49 T 12-10-2018 BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 Gene3D G3DSA:4.10.80.30 57 82 7.3E-49 T 12-10-2018 BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 Pfam PF05709 Phage tail protein 232 474 4.8E-49 T 12-10-2018 IPR008841 Siphovirus-type tail component BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 Gene3D G3DSA:2.40.30.200 202 336 1.0E-5 T 12-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 PRINTS PR01002 Flagellar protein FlgJ signature 25 43 9.7E-6 T 12-10-2018 BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 PRINTS PR01002 Flagellar protein FlgJ signature 130 148 9.7E-6 T 12-10-2018 BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 PRINTS PR01002 Flagellar protein FlgJ signature 110 129 9.7E-6 T 12-10-2018 BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 SMART SM00047 2 153 7.1E-47 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN31_00315 78932b7b3981a886adc7166f4c6cd6cc 475 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 12 148 2.0E-21 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN31_08235 53f3996158dd364dbd0531ac123f39a1 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 301 54.831 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BEN31_08235 53f3996158dd364dbd0531ac123f39a1 305 Pfam PF00589 Phage integrase family 113 287 1.3E-50 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN31_08235 53f3996158dd364dbd0531ac123f39a1 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 91 2.1E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BEN31_08235 53f3996158dd364dbd0531ac123f39a1 305 Gene3D G3DSA:1.10.443.10 112 295 9.5E-61 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN31_08235 53f3996158dd364dbd0531ac123f39a1 305 SUPERFAMILY SSF56349 9 295 6.77E-57 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN31_08235 53f3996158dd364dbd0531ac123f39a1 305 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 11 302 5.3E-108 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BEN31_08235 53f3996158dd364dbd0531ac123f39a1 305 Gene3D G3DSA:1.10.150.130 4 99 1.0E-22 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BEN31_14785 c9e8f4d734e95df9df2ca13bd8bebc5d 479 SUPERFAMILY SSF52091 392 476 1.1E-13 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_14785 c9e8f4d734e95df9df2ca13bd8bebc5d 479 ProSitePatterns PS01130 SLC26A transporters signature. 43 64 - T 12-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 BEN31_14785 c9e8f4d734e95df9df2ca13bd8bebc5d 479 Pfam PF01740 STAS domain 392 475 3.0E-11 T 12-10-2018 IPR002645 STAS domain BEN31_14785 c9e8f4d734e95df9df2ca13bd8bebc5d 479 Gene3D G3DSA:3.30.750.24 385 477 5.1E-26 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_14785 c9e8f4d734e95df9df2ca13bd8bebc5d 479 Pfam PF00916 Sulfate permease family 15 143 4.6E-28 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BEN31_14785 c9e8f4d734e95df9df2ca13bd8bebc5d 479 Pfam PF00916 Sulfate permease family 164 355 1.3E-33 T 12-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 2.0E-32 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 5.3E-186 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 SUPERFAMILY SSF55681 117 420 2.49E-105 T 12-10-2018 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 SUPERFAMILY SSF46589 1 113 3.87E-32 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 220 400 2.0E-37 T 12-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 44.292 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 PIRSF PIRSF001529 1 424 1.2E-191 T 12-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 Gene3D G3DSA:1.10.287.40 1 105 2.4E-27 T 12-10-2018 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 1.9E-34 T 12-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 BEN31_15680 2bf48b63c13b58fd8c0cc8dcee61e8a7 424 Gene3D G3DSA:3.30.930.10 106 424 5.2E-129 T 12-10-2018 BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Pfam PF17481 Phage tail sheath protein beta-sandwich domain 97 181 1.1E-14 T 12-10-2018 IPR035326 Phage tail sheath protein, beta-sandwich domain BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Pfam PF17482 Phage tail sheath C-terminal domain 340 448 1.0E-25 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Gene3D G3DSA:1.10.10.2290 251 331 7.8E-62 T 12-10-2018 BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Gene3D G3DSA:3.30.1490.360 27 93 2.3E-24 T 12-10-2018 BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Gene3D G3DSA:3.40.50.11790 190 361 7.8E-62 T 12-10-2018 BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Gene3D G3DSA:3.30.360.90 377 448 9.3E-19 T 12-10-2018 BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 ProDom PD032508 PHAGE-LIKE PBSX XKDK ELEMENT PHAGE LIN1278 SHEATH YQBL RELATED TAIL 315 448 2.0E-56 T 12-10-2018 IPR020287 Tail sheath protein, C-terminal domain BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 184 333 3.9E-38 T 12-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain BEN31_02145 6cc892c903e59f11ceb56822e3293baf 448 Gene3D G3DSA:3.30.160.610 97 179 1.2E-25 T 12-10-2018 BEN31_05815 155fa0db51d5a49edce3effb7918fcfe 215 SUPERFAMILY SSF141371 99 164 3.34E-6 T 12-10-2018 BEN31_05815 155fa0db51d5a49edce3effb7918fcfe 215 Pfam PF07238 PilZ domain 99 205 1.5E-10 T 12-10-2018 IPR009875 PilZ domain GO:0035438 BEN31_05815 155fa0db51d5a49edce3effb7918fcfe 215 Gene3D G3DSA:2.40.10.220 100 208 4.4E-13 T 12-10-2018 BEN31_05815 155fa0db51d5a49edce3effb7918fcfe 215 Pfam PF12945 Flagellar protein YcgR 3 90 2.2E-16 T 12-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal BEN31_10605 d67995ddf18d5f8953cbb1bd270ab72c 505 Gene3D G3DSA:3.50.50.60 199 322 2.8E-17 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10605 d67995ddf18d5f8953cbb1bd270ab72c 505 Gene3D G3DSA:3.50.50.60 1 88 8.0E-23 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10605 d67995ddf18d5f8953cbb1bd270ab72c 505 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 3 495 7.4E-144 T 12-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 BEN31_10605 d67995ddf18d5f8953cbb1bd270ab72c 505 SUPERFAMILY SSF51905 1 487 5.18E-64 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10605 d67995ddf18d5f8953cbb1bd270ab72c 505 Pfam PF01593 Flavin containing amine oxidoreductase 11 485 1.3E-26 T 12-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 BEN31_10605 d67995ddf18d5f8953cbb1bd270ab72c 505 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 1.7E-8 T 12-10-2018 BEN31_10605 d67995ddf18d5f8953cbb1bd270ab72c 505 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 1.7E-8 T 12-10-2018 BEN31_01100 4c39132684c22044b264336d5736ab5b 258 PIRSF PIRSF004846 1 258 8.1E-84 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BEN31_01100 4c39132684c22044b264336d5736ab5b 258 Gene3D G3DSA:3.40.190.10 35 255 6.5E-75 T 12-10-2018 BEN31_01100 4c39132684c22044b264336d5736ab5b 258 Gene3D G3DSA:3.40.190.10 112 218 6.5E-75 T 12-10-2018 BEN31_01100 4c39132684c22044b264336d5736ab5b 258 SUPERFAMILY SSF53850 32 256 1.59E-64 T 12-10-2018 BEN31_01100 4c39132684c22044b264336d5736ab5b 258 Pfam PF13531 Bacterial extracellular solute-binding protein 33 256 2.4E-46 T 12-10-2018 BEN31_01100 4c39132684c22044b264336d5736ab5b 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 38 254 1.1E-64 T 12-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 BEN31_17385 e686782580d7f79e21e11287cabd4670 290 SUPERFAMILY SSF52768 12 288 1.53E-86 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BEN31_17385 e686782580d7f79e21e11287cabd4670 290 PIRSF PIRSF036979 1 290 4.3E-97 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_17385 e686782580d7f79e21e11287cabd4670 290 TIGRFAM TIGR01230 agmatinase: agmatinase 10 286 5.8E-118 T 12-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 BEN31_17385 e686782580d7f79e21e11287cabd4670 290 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BEN31_17385 e686782580d7f79e21e11287cabd4670 290 Gene3D G3DSA:3.40.800.10 17 290 2.5E-95 T 12-10-2018 BEN31_17385 e686782580d7f79e21e11287cabd4670 290 Pfam PF00491 Arginase family 23 285 2.8E-80 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_04315 6be134097e79b3c6c16d79821e00b176 234 SMART SM01007 7 197 1.1E-63 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BEN31_04315 6be134097e79b3c6c16d79821e00b176 234 SUPERFAMILY SSF53639 1 222 4.32E-68 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BEN31_04315 6be134097e79b3c6c16d79821e00b176 234 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 7.7E-44 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BEN31_04315 6be134097e79b3c6c16d79821e00b176 234 Gene3D G3DSA:3.40.225.10 1 230 6.1E-60 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BEN31_02655 57da696bc7f12d52b5b7b4a9eaf99099 232 SUPERFAMILY SSF52540 1 225 1.82E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_02655 57da696bc7f12d52b5b7b4a9eaf99099 232 Pfam PF00005 ABC transporter 25 173 1.0E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_02655 57da696bc7f12d52b5b7b4a9eaf99099 232 Gene3D G3DSA:3.40.50.300 1 230 3.5E-70 T 12-10-2018 BEN31_02655 57da696bc7f12d52b5b7b4a9eaf99099 232 SMART SM00382 34 222 1.3E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_02655 57da696bc7f12d52b5b7b4a9eaf99099 232 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 2.1E-23 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 Gene3D G3DSA:3.30.1360.10 17 221 3.8E-89 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 313 1.8E-125 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 SMART SM00662 20 227 2.2E-103 T 12-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 1.9E-24 T 12-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 SUPERFAMILY SSF55257 5 230 1.16E-31 T 12-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 1.0E-25 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 1.9E-29 T 12-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 SUPERFAMILY SSF47789 247 313 7.85E-25 T 12-10-2018 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 Gene3D G3DSA:1.10.150.20 237 314 1.5E-34 T 12-10-2018 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.158 T 12-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 SUPERFAMILY SSF56553 50 171 1.31E-43 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_14905 ef701b55ad23a747966f3a3ba69d6915 314 Gene3D G3DSA:2.170.120.12 50 170 3.8E-89 T 12-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 BEN31_17490 a484873062f8615092b267662352457b 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_17490 a484873062f8615092b267662352457b 285 SUPERFAMILY SSF51569 1 285 6.15E-105 T 12-10-2018 BEN31_17490 a484873062f8615092b267662352457b 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 9.7E-134 T 12-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 BEN31_17490 a484873062f8615092b267662352457b 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 6.0E-118 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_17490 a484873062f8615092b267662352457b 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 2.1E-104 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_17490 a484873062f8615092b267662352457b 285 Gene3D G3DSA:3.20.20.70 1 285 4.4E-114 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_17490 a484873062f8615092b267662352457b 285 PIRSF PIRSF001359 1 285 4.9E-127 T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_17490 a484873062f8615092b267662352457b 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 12-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 BEN31_06435 cd3150d2ca951e908114b4e2e30a8009 320 Pfam PF13524 Glycosyl transferases group 1 214 306 2.3E-14 T 12-10-2018 BEN31_06435 cd3150d2ca951e908114b4e2e30a8009 320 Gene3D G3DSA:3.40.50.2000 154 300 1.4E-5 T 12-10-2018 BEN31_06435 cd3150d2ca951e908114b4e2e30a8009 320 SUPERFAMILY SSF53756 31 315 1.95E-7 T 12-10-2018 BEN31_06435 cd3150d2ca951e908114b4e2e30a8009 320 Pfam PF12996 DUF based on E. rectale Gene description (DUF3880) 81 154 1.7E-12 T 12-10-2018 IPR024542 Domain of unknown function DUF3880 BEN31_01185 8ef5acc3c6321cdf4fbe06bed4197e46 316 SUPERFAMILY SSF53807 39 313 7.85E-69 T 12-10-2018 BEN31_01185 8ef5acc3c6321cdf4fbe06bed4197e46 316 Gene3D G3DSA:3.40.50.1980 184 313 4.1E-42 T 12-10-2018 BEN31_01185 8ef5acc3c6321cdf4fbe06bed4197e46 316 Gene3D G3DSA:3.40.50.1980 23 179 4.8E-38 T 12-10-2018 BEN31_01185 8ef5acc3c6321cdf4fbe06bed4197e46 316 Pfam PF01497 Periplasmic binding protein 64 288 2.6E-38 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 SUPERFAMILY SSF50677 224 410 7.43E-56 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 803 23.225 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Pfam PF09334 tRNA synthetases class I (M) 39 170 1.7E-17 T 12-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 408 603 2.0E-20 T 12-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Gene3D G3DSA:1.10.730.10 599 740 7.5E-46 T 12-10-2018 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 7.7E-70 T 12-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Gene3D G3DSA:2.30.210.10 572 587 5.5E-278 T 12-10-2018 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Gene3D G3DSA:3.10.20.590 744 803 6.1E-22 T 12-10-2018 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Gene3D G3DSA:3.90.740.10 226 410 5.5E-278 T 12-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Gene3D G3DSA:3.40.50.620 32 571 5.5E-278 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 766 4.5E-20 T 12-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 SUPERFAMILY SSF47323 619 803 9.53E-40 T 12-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 SUPERFAMILY SSF52374 5 625 4.22E-144 T 12-10-2018 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 803 0.0 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 2.1E-57 T 12-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 BEN31_02680 b25f81c4873e215a3821e0ecad81b48c 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_10550 18d2135a9dd64428581c76072daba143 184 SMART SM01006 8 55 9.8E-11 T 12-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain BEN31_10550 18d2135a9dd64428581c76072daba143 184 SUPERFAMILY SSF55729 3 170 8.62E-50 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_10550 18d2135a9dd64428581c76072daba143 184 Gene3D G3DSA:3.40.630.30 1 182 2.5E-55 T 12-10-2018 BEN31_10550 18d2135a9dd64428581c76072daba143 184 Pfam PF13523 Acetyltransferase (GNAT) domain 12 155 1.0E-49 T 12-10-2018 BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 Pfam PF00005 ABC transporter 21 169 1.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 SUPERFAMILY SSF55021 249 340 1.72E-25 T 12-10-2018 BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 SUPERFAMILY SSF52540 1 240 3.41E-82 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 Gene3D G3DSA:3.30.70.260 247 340 2.1E-32 T 12-10-2018 BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 Pfam PF09383 NIL domain 265 337 4.1E-23 T 12-10-2018 IPR018449 NIL domain BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 SMART SM00382 30 218 2.4E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 Gene3D G3DSA:3.40.50.300 1 246 7.4E-76 T 12-10-2018 BEN31_01355 5997a6d78f3d4f3b4e31ffe827b5cc8f 341 SMART SM00930 263 338 9.6E-33 T 12-10-2018 IPR018449 NIL domain BEN31_09505 4176d0c5b3f5424d4d9242122daf7ca3 397 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 397 187.621 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 BEN31_09505 4176d0c5b3f5424d4d9242122daf7ca3 397 SUPERFAMILY SSF56112 7 391 7.43E-87 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_09505 4176d0c5b3f5424d4d9242122daf7ca3 397 Pfam PF01636 Phosphotransferase enzyme family 34 268 1.3E-13 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BEN31_09505 4176d0c5b3f5424d4d9242122daf7ca3 397 PIRSF PIRSF031134 3 396 8.1E-151 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 BEN31_09505 4176d0c5b3f5424d4d9242122daf7ca3 397 Gene3D G3DSA:3.30.200.20 2 118 1.9E-44 T 12-10-2018 BEN31_09505 4176d0c5b3f5424d4d9242122daf7ca3 397 Gene3D G3DSA:3.90.1200.10 119 397 2.8E-102 T 12-10-2018 BEN31_09505 4176d0c5b3f5424d4d9242122daf7ca3 397 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 36 392 2.5E-150 T 12-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 Gene3D G3DSA:3.10.580.10 195 344 1.9E-51 T 12-10-2018 BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 SMART SM01091 351 428 2.0E-21 T 12-10-2018 IPR005170 Transporter-associated domain BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 Pfam PF03471 Transporter associated domain 353 427 6.8E-16 T 12-10-2018 IPR005170 Transporter-associated domain BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 Pfam PF01595 Domain of unknown function DUF21 8 201 4.8E-50 T 12-10-2018 IPR002550 CNNM, transmembrane domain BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 Pfam PF00571 CBS domain 222 272 2.2E-5 T 12-10-2018 IPR000644 CBS domain BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 Pfam PF00571 CBS domain 282 335 7.7E-7 T 12-10-2018 IPR000644 CBS domain BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 Gene3D G3DSA:3.30.465.10 345 426 2.0E-15 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 SUPERFAMILY SSF56176 349 427 2.56E-16 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN31_01975 bc94ecfc58d7cce1153aa7dc8d1402fc 430 SUPERFAMILY SSF54631 204 338 4.04E-33 T 12-10-2018 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 SMART SM00304 371 431 4.5 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 SMART SM00304 305 357 1.3E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 Gene3D G3DSA:3.30.450.20 72 185 5.6E-39 T 12-10-2018 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 Gene3D G3DSA:1.10.287.950 353 661 7.2E-71 T 12-10-2018 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 SMART SM00319 33 153 4.2E-7 T 12-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 Pfam PF00672 HAMP domain 305 353 1.1E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 615 1.7E-52 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 SMART SM00283 386 661 2.3E-91 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 SUPERFAMILY SSF58104 325 661 1.57E-72 T 12-10-2018 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 SUPERFAMILY SSF103190 98 193 6.98E-13 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 Pfam PF02743 Cache domain 46 266 1.7E-29 T 12-10-2018 IPR033479 Double Cache domain 1 BEN31_02005 72f03b6ad7da981678bf8ee16af6be5f 663 Gene3D G3DSA:3.30.450.20 63 268 5.6E-39 T 12-10-2018 BEN31_03740 3181f2bc3ca9ff7c793e32b60870d3c9 343 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 4 310 3.9E-107 T 12-10-2018 IPR014253 Spore coat protein YsxE BEN31_03740 3181f2bc3ca9ff7c793e32b60870d3c9 343 SUPERFAMILY SSF56112 2 295 3.32E-14 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_03740 3181f2bc3ca9ff7c793e32b60870d3c9 343 Gene3D G3DSA:3.90.1200.10 94 316 9.9E-19 T 12-10-2018 BEN31_03740 3181f2bc3ca9ff7c793e32b60870d3c9 343 Gene3D G3DSA:3.30.200.20 3 91 3.5E-14 T 12-10-2018 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 Pfam PF00216 Bacterial DNA-binding protein 1 89 7.5E-38 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 Gene3D G3DSA:4.10.520.10 1 92 1.0E-40 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 SUPERFAMILY SSF47729 1 90 7.07E-36 T 12-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.0E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.0E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.0E-21 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 12-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 BEN31_05885 4b64bab0fc0d7fad90fa4b477d18da2f 92 SMART SM00411 1 90 4.4E-53 T 12-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 BEN31_05805 b02175021882a4e7ae1c8934cf052fbd 306 Gene3D G3DSA:1.10.10.2520 191 270 1.5E-30 T 12-10-2018 BEN31_05805 b02175021882a4e7ae1c8934cf052fbd 306 Pfam PF01471 Putative peptidoglycan binding domain 42 97 1.3E-14 T 12-10-2018 IPR002477 Peptidoglycan binding-like BEN31_05805 b02175021882a4e7ae1c8934cf052fbd 306 Pfam PF07486 Cell Wall Hydrolase 207 305 2.9E-25 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BEN31_05805 b02175021882a4e7ae1c8934cf052fbd 306 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 31 305 4.8E-92 T 12-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 BEN31_05805 b02175021882a4e7ae1c8934cf052fbd 306 Gene3D G3DSA:1.10.101.10 27 109 3.7E-20 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN31_05805 b02175021882a4e7ae1c8934cf052fbd 306 SUPERFAMILY SSF47090 33 101 1.36E-18 T 12-10-2018 IPR036365 PGBD-like superfamily BEN31_05805 b02175021882a4e7ae1c8934cf052fbd 306 Gene3D G3DSA:2.40.10.420 271 306 4.2E-20 T 12-10-2018 BEN31_06980 c1ef47f4f7a245bad771e8adcbed080f 512 Pfam PF02638 Glycosyl hydrolase-like 10 40 361 1.0E-118 T 12-10-2018 IPR003790 Glycosyl hydrolase-like 10 BEN31_06980 c1ef47f4f7a245bad771e8adcbed080f 512 Gene3D G3DSA:2.60.40.10 419 512 3.4E-5 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_06980 c1ef47f4f7a245bad771e8adcbed080f 512 SUPERFAMILY SSF51445 67 333 1.29E-24 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_06980 c1ef47f4f7a245bad771e8adcbed080f 512 Gene3D G3DSA:3.20.20.70 93 252 7.5E-9 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_15940 103f5dc95fd2d4e9dbbcca2132a6c4d7 404 SUPERFAMILY SSF103473 10 394 2.09E-46 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_15940 103f5dc95fd2d4e9dbbcca2132a6c4d7 404 Pfam PF07690 Major Facilitator Superfamily 35 357 1.3E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_15940 103f5dc95fd2d4e9dbbcca2132a6c4d7 404 Gene3D G3DSA:1.20.1250.20 13 200 6.1E-15 T 12-10-2018 BEN31_15940 103f5dc95fd2d4e9dbbcca2132a6c4d7 404 Gene3D G3DSA:1.20.1250.20 209 395 2.4E-18 T 12-10-2018 BEN31_15940 103f5dc95fd2d4e9dbbcca2132a6c4d7 404 TIGRFAM TIGR00896 CynX: cyanate transporter 21 375 2.3E-128 T 12-10-2018 IPR004747 Cyanate transport system protein GO:0016021 BEN31_02160 0faefec288863e2a6aa6eda7dd7fc04f 1353 Pfam PF01464 Transglycosylase SLT domain 1124 1247 9.0E-17 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 BEN31_02160 0faefec288863e2a6aa6eda7dd7fc04f 1353 SUPERFAMILY SSF53955 1136 1207 9.6E-11 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BEN31_02160 0faefec288863e2a6aa6eda7dd7fc04f 1353 Gene3D G3DSA:1.10.530.10 1121 1223 2.6E-5 T 12-10-2018 BEN31_05590 309dcb175351ba9840892d835d51e49d 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 5.4E-53 T 12-10-2018 IPR014204 Sporulation stage V, protein AE BEN31_05590 309dcb175351ba9840892d835d51e49d 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 2 111 1.5E-39 T 12-10-2018 IPR005562 SpoVA BEN31_12165 3d31b0d38652562112da154983cbf76d 325 Gene3D G3DSA:3.40.190.10 125 251 8.6E-49 T 12-10-2018 BEN31_12165 3d31b0d38652562112da154983cbf76d 325 SUPERFAMILY SSF53850 114 289 6.7E-8 T 12-10-2018 BEN31_12165 3d31b0d38652562112da154983cbf76d 325 PIRSF PIRSF017082 1 325 1.6E-78 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BEN31_12165 3d31b0d38652562112da154983cbf76d 325 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 112 319 1.4E-20 T 12-10-2018 IPR005064 Bordetella uptake gene GO:0030288 BEN31_12165 3d31b0d38652562112da154983cbf76d 325 Gene3D G3DSA:3.40.190.150 33 316 8.6E-49 T 12-10-2018 BEN31_06860 79bfc8420427125156495e4fed4300ec 234 Gene3D G3DSA:3.30.240.20 79 153 1.2E-20 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BEN31_06860 79bfc8420427125156495e4fed4300ec 234 Pfam PF04239 Protein of unknown function (DUF421) 88 203 2.0E-31 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BEN31_06860 79bfc8420427125156495e4fed4300ec 234 Gene3D G3DSA:3.30.240.20 167 229 1.0E-16 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BEN31_02995 ae69a9953064d865a5c665eb2b19aecb 567 Pfam PF06160 Septation ring formation regulator, EzrA 3 558 8.7E-175 T 12-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 BEN31_02995 ae69a9953064d865a5c665eb2b19aecb 567 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 563 22.497 T 12-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 BEN31_17960 6ae08bd7c4b6e76a62c5ac6c90d8e76f 388 SMART SM00854 60 299 3.1E-95 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA BEN31_17960 6ae08bd7c4b6e76a62c5ac6c90d8e76f 388 Gene3D G3DSA:3.60.21.10 90 324 1.7E-12 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_17960 6ae08bd7c4b6e76a62c5ac6c90d8e76f 388 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 61 299 3.0E-75 T 12-10-2018 IPR019079 Capsule synthesis protein, CapA BEN31_17960 6ae08bd7c4b6e76a62c5ac6c90d8e76f 388 SUPERFAMILY SSF56300 60 315 6.83E-40 T 12-10-2018 BEN31_01665 87dc91095a54cf931c74af294eda33c7 97 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 93 5.1E-27 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like BEN31_01665 87dc91095a54cf931c74af294eda33c7 97 Pfam PF06013 Proteins of 100 residues with WXG 5 89 1.6E-25 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like BEN31_01665 87dc91095a54cf931c74af294eda33c7 97 Gene3D G3DSA:1.10.287.1060 1 97 5.8E-28 T 12-10-2018 BEN31_01665 87dc91095a54cf931c74af294eda33c7 97 SUPERFAMILY SSF140453 4 96 3.79E-23 T 12-10-2018 IPR036689 ESAT-6-like superfamily BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 Gene3D G3DSA:3.20.20.70 1 322 6.6E-153 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 4.4E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 120 134 4.4E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 150 169 4.4E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 4.4E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 4.4E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 188 207 4.4E-59 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 12-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 PIRSF PIRSF001415 1 323 1.0E-156 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 SUPERFAMILY SSF51569 3 322 6.01E-146 T 12-10-2018 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 SMART SM01004 2 321 1.7E-243 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_03725 c9728b89b7d57719a97521447af5cbf5 323 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 320 3.4E-152 T 12-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 BEN31_05970 15f77a0cb58e250af32fd608c867a846 365 Pfam PF00155 Aminotransferase class I and II 30 354 3.9E-63 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_05970 15f77a0cb58e250af32fd608c867a846 365 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 357 3.4E-115 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BEN31_05970 15f77a0cb58e250af32fd608c867a846 365 Gene3D G3DSA:3.40.640.10 43 268 1.6E-117 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_05970 15f77a0cb58e250af32fd608c867a846 365 SUPERFAMILY SSF53383 4 361 2.92E-82 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_05970 15f77a0cb58e250af32fd608c867a846 365 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BEN31_05970 15f77a0cb58e250af32fd608c867a846 365 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 360 61.529 T 12-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 BEN31_05970 15f77a0cb58e250af32fd608c867a846 365 Gene3D G3DSA:3.90.1150.10 20 350 1.6E-117 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_00400 1e0e1fbb685e11e056ea9230988bfe98 295 Gene3D G3DSA:1.10.3720.10 63 270 3.1E-18 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00400 1e0e1fbb685e11e056ea9230988bfe98 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 273 1.2E-25 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_00400 1e0e1fbb685e11e056ea9230988bfe98 295 SUPERFAMILY SSF161098 68 255 1.44E-21 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00400 1e0e1fbb685e11e056ea9230988bfe98 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 4 45 4.3E-10 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BEN31_13975 ba67d6be07eaeb8ca850b4453f31c4b0 109 ProDom PD673109 PRECURSOR SIGNAL YCKD ORF4 DOMAIN 39 99 3.0E-14 T 12-10-2018 IPR024485 Protein of unknown function DUF2680 BEN31_13975 ba67d6be07eaeb8ca850b4453f31c4b0 109 Pfam PF10925 Protein of unknown function (DUF2680) 41 97 1.0E-23 T 12-10-2018 IPR024485 Protein of unknown function DUF2680 BEN31_10620 c8f1bce6679978a1c9c0a8c07099800a 122 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 3 122 1.0E-26 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 BEN31_10620 c8f1bce6679978a1c9c0a8c07099800a 122 Hamap MF_01536 UPF0344 protein . 2 122 15.801 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 BEN31_10620 c8f1bce6679978a1c9c0a8c07099800a 122 Pfam PF07457 Protein of unknown function (DUF1516) 3 112 1.3E-34 T 12-10-2018 IPR010899 Protein of unknown function UPF0344 BEN31_15375 c927a8dccd89268be83e51e8cac4ae64 827 SMART SM00331 592 804 3.4E-42 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_15375 c927a8dccd89268be83e51e8cac4ae64 827 SMART SM00332 601 802 2.0E-4 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_15375 c927a8dccd89268be83e51e8cac4ae64 827 Gene3D G3DSA:3.60.40.10 586 827 1.1E-53 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_15375 c927a8dccd89268be83e51e8cac4ae64 827 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 620 804 4.8E-35 T 12-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_15375 c927a8dccd89268be83e51e8cac4ae64 827 SUPERFAMILY SSF81606 597 805 1.96E-20 T 12-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_15375 c927a8dccd89268be83e51e8cac4ae64 827 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 42 804 3.9E-297 T 12-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 BEN31_14095 6187df042a1a2c2a5e72cd4cd634124e 288 Gene3D G3DSA:3.30.70.1410 121 204 5.0E-30 T 12-10-2018 BEN31_14095 6187df042a1a2c2a5e72cd4cd634124e 288 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 20 276 1.8E-25 T 12-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal BEN31_14095 6187df042a1a2c2a5e72cd4cd634124e 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 248 1.5E-16 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_14095 6187df042a1a2c2a5e72cd4cd634124e 288 SUPERFAMILY SSF56784 17 279 4.13E-27 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_10595 f04f2ed079e043c603173740018facab 279 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 125 140 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BEN31_10595 f04f2ed079e043c603173740018facab 279 Pfam PF00494 Squalene/phytoene synthase 16 268 3.2E-75 T 12-10-2018 BEN31_10595 f04f2ed079e043c603173740018facab 279 SUPERFAMILY SSF48576 7 274 8.22E-79 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_10595 f04f2ed079e043c603173740018facab 279 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 156 182 - T 12-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 BEN31_10595 f04f2ed079e043c603173740018facab 279 Gene3D G3DSA:1.10.600.10 1 278 9.2E-101 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_11620 f8c45e3a8d0507a235430d629bb55516 340 SMART SM00382 36 241 5.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_11620 f8c45e3a8d0507a235430d629bb55516 340 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 3.8E-30 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_11620 f8c45e3a8d0507a235430d629bb55516 340 Gene3D G3DSA:3.40.50.300 5 331 3.8E-105 T 12-10-2018 BEN31_11620 f8c45e3a8d0507a235430d629bb55516 340 SUPERFAMILY SSF52540 7 254 5.97E-71 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_11620 f8c45e3a8d0507a235430d629bb55516 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 1.4E-20 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_11620 f8c45e3a8d0507a235430d629bb55516 340 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_11620 f8c45e3a8d0507a235430d629bb55516 340 Pfam PF00005 ABC transporter 28 183 2.2E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_02425 94e9afeaaf5eb1510010769427bda331 312 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 27 297 1.8E-34 T 12-10-2018 BEN31_02425 94e9afeaaf5eb1510010769427bda331 312 Pfam PF01040 UbiA prenyltransferase family 35 265 1.0E-38 T 12-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 BEN31_02425 94e9afeaaf5eb1510010769427bda331 312 PIRSF PIRSF005355 13 310 3.9E-88 T 12-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 BEN31_02425 94e9afeaaf5eb1510010769427bda331 312 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 18 305 19.988 T 12-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 BEN31_10770 b07bad56e69d732110e9301b85cee2fa 389 SUPERFAMILY SSF103473 17 388 9.16E-33 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_10770 b07bad56e69d732110e9301b85cee2fa 389 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_10770 b07bad56e69d732110e9301b85cee2fa 389 Gene3D G3DSA:1.20.1250.20 16 385 1.9E-29 T 12-10-2018 BEN31_10770 b07bad56e69d732110e9301b85cee2fa 389 Pfam PF07690 Major Facilitator Superfamily 20 342 4.5E-18 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 SUPERFAMILY SSF88659 94 157 2.24E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 TIGRFAM TIGR02950 SigM_subfam: RNA polymerase sigma factor, SigM family 2 156 6.3E-68 T 12-10-2018 IPR014296 RNA polymerase sigma-M, bacillaceae GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 Gene3D G3DSA:1.10.10.10 95 158 3.1E-15 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 Pfam PF04542 Sigma-70 region 2 6 72 4.7E-19 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 Pfam PF08281 Sigma-70, region 4 103 152 1.9E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 153 8.4E-31 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 Gene3D G3DSA:1.10.1740.10 2 74 6.3E-22 T 12-10-2018 BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 28 58 - T 12-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_11155 087ebb2e1a186323460bf33e976140ba 163 SUPERFAMILY SSF88946 4 81 7.46E-22 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_02165 3b148196217e795ffe46278bb8a69a78 222 Pfam PF01476 LysM domain 164 221 4.0E-19 T 12-10-2018 IPR018392 LysM domain BEN31_02165 3b148196217e795ffe46278bb8a69a78 222 Gene3D G3DSA:3.10.350.10 162 220 4.8E-13 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_02165 3b148196217e795ffe46278bb8a69a78 222 SMART SM00257 163 221 2.9E-8 T 12-10-2018 IPR018392 LysM domain BEN31_02165 3b148196217e795ffe46278bb8a69a78 222 SUPERFAMILY SSF54106 161 221 2.49E-7 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 Pfam PF00375 Sodium:dicarboxylate symporter family 3 396 2.8E-136 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 SUPERFAMILY SSF118215 3 398 3.14E-126 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 214 233 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.9E-56 T 12-10-2018 BEN31_13435 db7b5c49fc173baa94d834f576916da8 413 Gene3D G3DSA:1.10.3860.10 1 404 2.0E-144 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_03790 054bf1b5e6889248f0c977ba15389a7f 172 Pfam PF04093 rod shape-determining protein MreD 3 162 2.1E-34 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BEN31_03790 054bf1b5e6889248f0c977ba15389a7f 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 159 1.5E-24 T 12-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 BEN31_18240 569a72c70765ec9c744bf8d4b89bfa1d 222 SUPERFAMILY SSF54980 135 199 1.01E-11 T 12-10-2018 IPR035647 EF-G domain III/V-like BEN31_18240 569a72c70765ec9c744bf8d4b89bfa1d 222 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 2.7E-19 T 12-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal BEN31_18240 569a72c70765ec9c744bf8d4b89bfa1d 222 Gene3D G3DSA:3.30.230.30 1 132 7.3E-52 T 12-10-2018 IPR036956 Impact, N-terminal domain superfamily BEN31_18240 569a72c70765ec9c744bf8d4b89bfa1d 222 Pfam PF01205 Uncharacterized protein family UPF0029 20 124 6.5E-33 T 12-10-2018 IPR001498 Impact, N-terminal BEN31_18240 569a72c70765ec9c744bf8d4b89bfa1d 222 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 2 202 8.2E-83 T 12-10-2018 IPR015796 Impact family, bacterial/archaeal BEN31_18240 569a72c70765ec9c744bf8d4b89bfa1d 222 SUPERFAMILY SSF54211 3 132 4.93E-44 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_18240 569a72c70765ec9c744bf8d4b89bfa1d 222 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 12-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site BEN31_04940 81366690ceaa21f30109c78abe49b1c7 346 PRINTS PR00812 Bacterial general secretion pathway protein F signature 327 346 6.8E-7 T 12-10-2018 IPR003004 GspF/PilC family BEN31_04940 81366690ceaa21f30109c78abe49b1c7 346 PRINTS PR00812 Bacterial general secretion pathway protein F signature 13 25 6.8E-7 T 12-10-2018 IPR003004 GspF/PilC family BEN31_04940 81366690ceaa21f30109c78abe49b1c7 346 PRINTS PR00812 Bacterial general secretion pathway protein F signature 109 137 6.8E-7 T 12-10-2018 IPR003004 GspF/PilC family BEN31_04940 81366690ceaa21f30109c78abe49b1c7 346 Pfam PF00482 Type II secretion system (T2SS), protein F 216 338 3.3E-20 T 12-10-2018 IPR018076 Type II secretion system F domain BEN31_04940 81366690ceaa21f30109c78abe49b1c7 346 Pfam PF00482 Type II secretion system (T2SS), protein F 20 137 1.1E-13 T 12-10-2018 IPR018076 Type II secretion system F domain BEN31_04940 81366690ceaa21f30109c78abe49b1c7 346 Gene3D G3DSA:1.20.81.30 3 113 1.7E-14 T 12-10-2018 BEN31_04940 81366690ceaa21f30109c78abe49b1c7 346 Gene3D G3DSA:1.20.81.30 199 311 3.3E-15 T 12-10-2018 BEN31_15805 740e9ac5d5925c9ba313c0d26df35ccc 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 202 6.3E-58 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN31_15805 740e9ac5d5925c9ba313c0d26df35ccc 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 217 2.8E-51 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN31_15805 740e9ac5d5925c9ba313c0d26df35ccc 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.24 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN31_15805 740e9ac5d5925c9ba313c0d26df35ccc 239 PIRSF PIRSF003078 1 220 8.5E-58 T 12-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 BEN31_15805 740e9ac5d5925c9ba313c0d26df35ccc 239 Gene3D G3DSA:3.40.50.150 1 239 8.1E-87 T 12-10-2018 BEN31_15805 740e9ac5d5925c9ba313c0d26df35ccc 239 SUPERFAMILY SSF53335 1 237 4.58E-50 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_11090 43da7b118ef6e85939c489a47cf34d32 168 Gene3D G3DSA:3.40.50.620 3 168 2.6E-36 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_11090 43da7b118ef6e85939c489a47cf34d32 168 PRINTS PR01438 Universal stress protein signature 128 140 4.0E-14 T 12-10-2018 IPR006015 Universal stress protein A BEN31_11090 43da7b118ef6e85939c489a47cf34d32 168 PRINTS PR01438 Universal stress protein signature 146 168 4.0E-14 T 12-10-2018 IPR006015 Universal stress protein A BEN31_11090 43da7b118ef6e85939c489a47cf34d32 168 PRINTS PR01438 Universal stress protein signature 4 22 4.0E-14 T 12-10-2018 IPR006015 Universal stress protein A BEN31_11090 43da7b118ef6e85939c489a47cf34d32 168 SUPERFAMILY SSF52402 5 168 1.09E-31 T 12-10-2018 BEN31_11090 43da7b118ef6e85939c489a47cf34d32 168 Pfam PF00582 Universal stress protein family 5 168 9.4E-37 T 12-10-2018 IPR006016 UspA BEN31_16985 70008a4a7571ec22a73be13cc6b60049 124 Pfam PF12680 SnoaL-like domain 18 109 3.4E-7 T 12-10-2018 IPR037401 SnoaL-like domain BEN31_16985 70008a4a7571ec22a73be13cc6b60049 124 SUPERFAMILY SSF54427 3 112 1.82E-20 T 12-10-2018 IPR032710 NTF2-like domain superfamily BEN31_16985 70008a4a7571ec22a73be13cc6b60049 124 Gene3D G3DSA:3.10.450.50 1 124 7.9E-41 T 12-10-2018 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 SUPERFAMILY SSF48150 1 211 9.42E-74 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 12-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 Gene3D G3DSA:1.10.1670.10 17 205 4.2E-82 T 12-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 Gene3D G3DSA:1.10.340.30 22 133 4.2E-82 T 12-10-2018 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 SMART SM00525 188 208 8.5E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 1.3E-4 T 12-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 TIGRFAM TIGR01083 nth: endonuclease III 4 196 3.2E-89 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 Pfam PF00633 Helix-hairpin-helix motif 100 128 9.8E-10 T 12-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 170 3.1E-24 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 PIRSF PIRSF001435 2 214 1.6E-58 T 12-10-2018 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 Hamap MF_00942 Endonuclease III [nth]. 1 211 39.632 T 12-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 BEN31_06105 df3264476e8ff883fb6a9360adf75ab0 220 SMART SM00478 39 187 4.0E-70 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 Pfam PF01266 FAD dependent oxidoreductase 21 351 1.5E-53 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 SUPERFAMILY SSF54373 249 342 1.02E-10 T 12-10-2018 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 336 342 7.9E-31 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 7.9E-31 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 7.9E-31 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 7.9E-31 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 7.9E-31 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 7.9E-31 T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 403 531 5.0E-27 T 12-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 SUPERFAMILY SSF51905 8 237 1.37E-34 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 Gene3D G3DSA:3.30.9.10 102 343 7.5E-137 T 12-10-2018 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 Gene3D G3DSA:1.10.8.870 419 551 3.5E-40 T 12-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 25 42 - T 12-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 BEN31_11230 b5fb8ca8d27036d18012abfba060686f 553 Gene3D G3DSA:3.50.50.60 18 379 7.5E-137 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_15545 7c6cc296fae77accc868088885af7c19 275 Pfam PF04468 PSP1 C-terminal conserved region 62 146 4.1E-31 T 12-10-2018 IPR007557 PSP1, C-terminal BEN31_18025 58f4d525ef7ee190458651c1d66ca5a2 199 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 12-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BEN31_18025 58f4d525ef7ee190458651c1d66ca5a2 199 Gene3D G3DSA:3.20.20.70 3 198 2.4E-60 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_18025 58f4d525ef7ee190458651c1d66ca5a2 199 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 10 188 8.8E-57 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BEN31_18025 58f4d525ef7ee190458651c1d66ca5a2 199 SUPERFAMILY SSF51569 8 188 1.5E-52 T 12-10-2018 BEN31_18025 58f4d525ef7ee190458651c1d66ca5a2 199 Pfam PF01081 KDPG and KHG aldolase 9 194 8.4E-55 T 12-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 SMART SM00052 1 241 5.3E-41 T 12-10-2018 IPR001633 EAL domain BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 SUPERFAMILY SSF141868 7 238 2.09E-45 T 12-10-2018 IPR035919 EAL domain superfamily BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 Gene3D G3DSA:1.20.5.170 246 290 2.6E-20 T 12-10-2018 BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 Pfam PF10388 EAL-domain associated signalling protein domain 240 406 1.4E-79 T 12-10-2018 IPR018842 YkuI, C-terminal BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 Gene3D G3DSA:3.20.20.450 1 229 4.1E-66 T 12-10-2018 IPR035919 EAL domain superfamily BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 Gene3D G3DSA:3.30.450.20 291 406 1.6E-45 T 12-10-2018 BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 SUPERFAMILY SSF103190 263 404 1.41E-44 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_09260 5a9aa358f66d1f6d7fd1e550f9496666 406 Pfam PF00563 EAL domain 13 236 1.5E-29 T 12-10-2018 IPR001633 EAL domain BEN31_15815 1d379d4f1af9c6c4e5b0f9e2c56a1a4e 274 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 137 239 2.1E-6 T 12-10-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family BEN31_15815 1d379d4f1af9c6c4e5b0f9e2c56a1a4e 274 SUPERFAMILY SSF54001 123 237 1.16E-10 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_08175 70e206b727b408f8983cfc3569a789bb 232 Gene3D G3DSA:1.25.60.10 150 229 2.3E-7 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily BEN31_08175 70e206b727b408f8983cfc3569a789bb 232 Pfam PF03448 MgtE intracellular N domain 161 226 9.7E-9 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BEN31_08175 70e206b727b408f8983cfc3569a789bb 232 SUPERFAMILY SSF158791 166 218 2.35E-7 T 12-10-2018 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PIRSF PIRSF000099 2 427 9.8E-171 T 12-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 31 423 2.3E-169 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 SUPERFAMILY SSF53720 25 423 4.9E-86 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 Gene3D G3DSA:3.40.50.1980 30 228 4.2E-126 T 12-10-2018 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 226 258 - T 12-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 167 193 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 226 247 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 132 158 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 197 222 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 248 267 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 6.2E-88 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 424 42.79 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 Pfam PF00815 Histidinol dehydrogenase 24 423 1.1E-170 T 12-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 BEN31_18575 5f5994108fe23f335fe0a1266c1575ec 429 Gene3D G3DSA:3.40.50.1980 230 346 4.2E-126 T 12-10-2018 BEN31_02415 f85ebfe339eda295152b6a69b3faac60 158 Pfam PF03073 TspO/MBR family 13 154 1.3E-27 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 BEN31_02415 f85ebfe339eda295152b6a69b3faac60 158 Gene3D G3DSA:1.20.1260.100 3 158 2.2E-28 T 12-10-2018 IPR038330 TspO/MBR-related superfamily BEN31_02415 f85ebfe339eda295152b6a69b3faac60 158 PIRSF PIRSF005859 1 158 6.3E-37 T 12-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 SUPERFAMILY SSF53671 10 311 2.62E-113 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 290 301 1.3E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 52 66 1.3E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 125 139 1.3E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 1.3E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 85 98 1.3E-28 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 273 9.0E-29 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 54 73 9.0E-29 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 299 9.0E-29 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 9.0E-29 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 307 1.8E-60 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 Gene3D G3DSA:3.40.50.1370 13 138 4.3E-126 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 149 1.4E-54 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 13 311 2.9E-133 T 12-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 54 61 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 12 312 81.917 T 12-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 BEN31_10420 9f36ea5009f409d2940d31bb25472e36 316 Gene3D G3DSA:3.40.50.1370 139 306 4.3E-126 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN31_01600 c896abb32e8115ddaac8c3a7f7a17405 257 Gene3D G3DSA:1.10.1660.10 2 139 2.8E-47 T 12-10-2018 BEN31_01600 c896abb32e8115ddaac8c3a7f7a17405 257 SUPERFAMILY SSF89082 161 244 1.96E-23 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BEN31_01600 c896abb32e8115ddaac8c3a7f7a17405 257 Pfam PF07739 TipAS antibiotic-recognition domain 130 243 2.2E-30 T 12-10-2018 IPR012925 TipAS antibiotic-recognition domain BEN31_01600 c896abb32e8115ddaac8c3a7f7a17405 257 Gene3D G3DSA:1.10.490.50 159 245 9.5E-16 T 12-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain BEN31_01600 c896abb32e8115ddaac8c3a7f7a17405 257 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.5E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_01600 c896abb32e8115ddaac8c3a7f7a17405 257 SUPERFAMILY SSF46955 3 110 2.12E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_01600 c896abb32e8115ddaac8c3a7f7a17405 257 SMART SM00422 3 72 2.4E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 SUPERFAMILY SSF88697 282 342 1.54E-13 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 SMART SM00359 282 363 6.7E-12 T 12-10-2018 IPR002478 PUA domain GO:0003723 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 Pfam PF00696 Amino acid kinase family 8 225 1.4E-41 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 Pfam PF01472 PUA domain 282 355 3.6E-14 T 12-10-2018 IPR002478 PUA domain GO:0003723 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 Gene3D G3DSA:3.40.1160.10 3 265 2.8E-85 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 8 268 37.259 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 Gene3D G3DSA:2.30.130.10 271 364 7.5E-19 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 PRINTS PR00474 Glutamate 5-kinase family signature 212 232 2.5E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 PRINTS PR00474 Glutamate 5-kinase family signature 119 140 2.5E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 PRINTS PR00474 Glutamate 5-kinase family signature 45 59 2.5E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 PRINTS PR00474 Glutamate 5-kinase family signature 79 107 2.5E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 PRINTS PR00474 Glutamate 5-kinase family signature 151 178 2.5E-52 T 12-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 PIRSF PIRSF000729 3 366 8.4E-134 T 12-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 8 357 8.4E-126 T 12-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 BEN31_06790 718dc23c3a7ab5bc92c73623c71516cb 372 SUPERFAMILY SSF53633 8 259 1.14E-67 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_16875 c0bbace6bcf40e1a9e5bd12c40d79f9f 449 PIRSF PIRSF006351 1 443 1.2E-157 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_16875 c0bbace6bcf40e1a9e5bd12c40d79f9f 449 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 435 3.2E-200 T 12-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 BEN31_16875 c0bbace6bcf40e1a9e5bd12c40d79f9f 449 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 435 3.2E-200 T 12-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 BEN31_16875 c0bbace6bcf40e1a9e5bd12c40d79f9f 449 Pfam PF02378 Phosphotransferase system, EIIC 29 359 1.3E-74 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_18530 71b8d1314d5c2006359c209f41d5c374 274 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN31_18530 71b8d1314d5c2006359c209f41d5c374 274 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 263 1.5E-88 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN31_18530 71b8d1314d5c2006359c209f41d5c374 274 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 255 7.3E-80 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN31_18530 71b8d1314d5c2006359c209f41d5c374 274 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 18.121 T 12-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 BEN31_17235 7412abea37c64abb9ffdad04e8a0728b 151 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 2 147 4.0E-25 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BEN31_17235 7412abea37c64abb9ffdad04e8a0728b 151 Gene3D G3DSA:2.60.120.10 1 150 2.4E-55 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_17235 7412abea37c64abb9ffdad04e8a0728b 151 SUPERFAMILY SSF51182 1 149 1.58E-42 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_17235 7412abea37c64abb9ffdad04e8a0728b 151 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 2 147 2.4E-25 T 12-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 286 3.5E-85 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 308 406 9.4E-21 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 7.1E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 7.1E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 7.1E-15 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 Gene3D G3DSA:2.60.410.10 309 411 2.1E-21 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 Gene3D G3DSA:3.40.710.10 28 308 2.1E-89 T 12-10-2018 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 SMART SM00936 308 411 9.2E-24 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 SUPERFAMILY SSF56601 12 308 1.05E-76 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_15700 9fc824fe9643c7792b6c7f755c149d1b 441 SUPERFAMILY SSF69189 300 389 2.16E-20 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_00175 96d69ed01043513d6f54fec7b925e63d 128 Gene3D G3DSA:1.20.140.160 12 110 7.9E-6 T 12-10-2018 BEN31_00175 96d69ed01043513d6f54fec7b925e63d 128 Pfam PF04545 Sigma-70, region 4 60 106 2.7E-7 T 12-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 BEN31_00175 96d69ed01043513d6f54fec7b925e63d 128 SUPERFAMILY SSF88659 60 108 1.66E-8 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_12855 0a207a76ef43c17c6de768cc3e3c5891 172 Gene3D G3DSA:3.40.630.30 1 172 2.6E-45 T 12-10-2018 BEN31_12855 0a207a76ef43c17c6de768cc3e3c5891 172 Pfam PF00583 Acetyltransferase (GNAT) family 53 147 1.8E-17 T 12-10-2018 IPR000182 GNAT domain BEN31_12855 0a207a76ef43c17c6de768cc3e3c5891 172 SUPERFAMILY SSF55729 3 171 8.02E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_17980 e34635af645d8dd753b990f693b93a36 456 Gene3D G3DSA:1.20.1250.20 2 445 3.5E-135 T 12-10-2018 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 437 1.2E-114 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 Pfam PF00083 Sugar (and other) transporter 12 440 6.6E-121 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 313 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 SUPERFAMILY SSF103473 6 440 4.58E-83 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_17980 e34635af645d8dd753b990f693b93a36 456 PRINTS PR00171 Sugar transporter signature 342 363 2.5E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 PRINTS PR00171 Sugar transporter signature 253 263 2.5E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 PRINTS PR00171 Sugar transporter signature 365 377 2.5E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 PRINTS PR00171 Sugar transporter signature 101 120 2.5E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_17980 e34635af645d8dd753b990f693b93a36 456 PRINTS PR00171 Sugar transporter signature 18 28 2.5E-25 T 12-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 BEN31_07835 91160024a298469c81861c096d1f41b9 1039 SUPERFAMILY SSF82866 823 1032 1.96E-31 T 12-10-2018 BEN31_07835 91160024a298469c81861c096d1f41b9 1039 Gene3D G3DSA:1.20.1640.10 141 335 4.9E-11 T 12-10-2018 BEN31_07835 91160024a298469c81861c096d1f41b9 1039 SUPERFAMILY SSF82866 151 338 4.05E-32 T 12-10-2018 BEN31_07835 91160024a298469c81861c096d1f41b9 1039 Gene3D G3DSA:1.20.1640.10 829 1032 1.1E-10 T 12-10-2018 BEN31_07835 91160024a298469c81861c096d1f41b9 1039 SUPERFAMILY SSF58104 488 740 1.96E-6 T 12-10-2018 BEN31_07835 91160024a298469c81861c096d1f41b9 1039 Pfam PF03176 MMPL family 44 363 1.5E-60 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BEN31_07835 91160024a298469c81861c096d1f41b9 1039 Pfam PF03176 MMPL family 704 1038 3.5E-43 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 Pfam PF08222 CodY helix-turn-helix domain 198 257 5.4E-37 T 12-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 Gene3D G3DSA:3.30.450.40 1 159 2.9E-71 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 SUPERFAMILY SSF46785 167 256 4.85E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 Gene3D G3DSA:1.10.10.10 160 259 1.0E-47 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 147.838 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 1.4E-128 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 PIRSF PIRSF011572 1 257 2.0E-122 T 12-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 BEN31_08220 e4ddc5aba15b0d25b73248cb53ef4ef4 259 Pfam PF06018 CodY GAF-like domain 3 178 1.4E-80 T 12-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 BEN31_11945 62bbc5e73075c57849e7afce11a36aff 263 Pfam PF01522 Polysaccharide deacetylase 61 184 1.1E-36 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_11945 62bbc5e73075c57849e7afce11a36aff 263 SUPERFAMILY SSF88713 42 253 1.93E-67 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_11945 62bbc5e73075c57849e7afce11a36aff 263 Gene3D G3DSA:3.20.20.370 24 261 1.5E-92 T 12-10-2018 BEN31_11945 62bbc5e73075c57849e7afce11a36aff 263 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 30 253 2.1E-110 T 12-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA BEN31_04890 84c05d43dbf86c687f2e0aefa9a16e1c 417 SUPERFAMILY SSF103473 13 399 6.15E-30 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_04890 84c05d43dbf86c687f2e0aefa9a16e1c 417 Pfam PF07690 Major Facilitator Superfamily 15 360 4.5E-14 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_04890 84c05d43dbf86c687f2e0aefa9a16e1c 417 Gene3D G3DSA:1.20.1250.20 11 396 1.1E-21 T 12-10-2018 BEN31_03900 89c766a7b44c547e33fe905d7a05bdbd 170 Gene3D G3DSA:3.30.70.1740 89 166 9.3E-28 T 12-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily BEN31_03900 89c766a7b44c547e33fe905d7a05bdbd 170 Pfam PF08955 BofC C-terminal domain 89 162 3.9E-28 T 12-10-2018 IPR015050 Bypass of forespore C, C-terminal BEN31_03900 89c766a7b44c547e33fe905d7a05bdbd 170 Pfam PF08977 Bypass of Forespore C, N terminal 37 87 1.6E-22 T 12-10-2018 IPR015071 Bypass-of-forespore C, N-terminal BEN31_03900 89c766a7b44c547e33fe905d7a05bdbd 170 Gene3D G3DSA:3.10.20.420 35 88 1.2E-18 T 12-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 Pfam PF00176 SNF2 family N-terminal domain 79 300 8.5E-37 T 12-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 Gene3D G3DSA:3.40.50.10810 62 261 4.5E-42 T 12-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 SMART SM00487 56 235 1.1E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 SUPERFAMILY SSF52540 14 259 2.49E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 Pfam PF00271 Helicase conserved C-terminal domain 360 463 1.5E-19 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 SUPERFAMILY SSF52540 169 513 4.32E-54 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 SMART SM00490 383 463 1.9E-20 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_05005 395228a8968ede3a1ccfcb5ff4ecda55 556 Gene3D G3DSA:3.40.50.300 271 548 2.6E-52 T 12-10-2018 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 12-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 Pfam PF00491 Arginase family 6 298 3.4E-82 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 PIRSF PIRSF036979 2 301 6.0E-39 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 PRINTS PR00116 Arginase signature 176 194 5.4E-44 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 PRINTS PR00116 Arginase signature 225 254 5.4E-44 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 PRINTS PR00116 Arginase signature 260 274 5.4E-44 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 PRINTS PR00116 Arginase signature 122 149 5.4E-44 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 PRINTS PR00116 Arginase signature 99 114 5.4E-44 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 SUPERFAMILY SSF52768 6 300 5.4E-95 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 Gene3D G3DSA:3.40.800.10 4 303 3.4E-117 T 12-10-2018 BEN31_14720 3aed334d5b43ff494bcdf30b413589ed 303 TIGRFAM TIGR01229 rocF_arginase: arginase 9 303 3.3E-105 T 12-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 BEN31_08630 44f5825fc3ff311a4146a754169aeb4e 118 Gene3D G3DSA:2.40.33.40 1 118 6.8E-33 T 12-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 BEN31_08630 44f5825fc3ff311a4146a754169aeb4e 118 SUPERFAMILY SSF141530 1 117 4.18E-34 T 12-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 BEN31_08630 44f5825fc3ff311a4146a754169aeb4e 118 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 115 3.2E-32 T 12-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BEN31_08630 44f5825fc3ff311a4146a754169aeb4e 118 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 2 116 5.0E-28 T 12-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 BEN31_03455 bbeab01b05b98397723ba661df10537a 573 Gene3D G3DSA:3.40.50.12780 12 453 7.4E-129 T 12-10-2018 BEN31_03455 bbeab01b05b98397723ba661df10537a 573 Gene3D G3DSA:3.30.300.310 458 562 2.2E-31 T 12-10-2018 BEN31_03455 bbeab01b05b98397723ba661df10537a 573 Pfam PF00501 AMP-binding enzyme 33 461 7.0E-113 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_03455 bbeab01b05b98397723ba661df10537a 573 SUPERFAMILY SSF56801 17 556 1.1E-155 T 12-10-2018 BEN31_03455 bbeab01b05b98397723ba661df10537a 573 ProSitePatterns PS00455 Putative AMP-binding domain signature. 214 225 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_03455 bbeab01b05b98397723ba661df10537a 573 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 546 7.4E-20 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_06250 0afef791282e316d262783eaeefbcb8c 131 Gene3D G3DSA:3.30.420.10 3 129 2.2E-28 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_06250 0afef791282e316d262783eaeefbcb8c 131 SUPERFAMILY SSF53098 4 123 2.28E-28 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_06250 0afef791282e316d262783eaeefbcb8c 131 Pfam PF13456 Reverse transcriptase-like 8 125 2.3E-18 T 12-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 BEN31_02175 142a4b6880df17304844fc5662c28337 88 Pfam PF10844 Protein of unknown function (DUF2577) 7 87 1.4E-9 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 BEN31_02175 142a4b6880df17304844fc5662c28337 88 ProDom PD028957 PBSX RELATED XKDR ELEMENT LIN1285 PHAGE PHAGE-LIKE YQBR 3 88 1.0E-23 T 12-10-2018 IPR022555 Protein of unknown function, DUF2577 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 Pfam PF00224 Pyruvate kinase, barrel domain 1 343 1.0E-157 T 12-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 2.0E-190 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 Gene3D G3DSA:3.20.20.60 4 332 2.1E-150 T 12-10-2018 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 Gene3D G3DSA:3.40.1380.20 340 473 4.9E-46 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 SUPERFAMILY SSF52935 323 474 2.49E-42 T 12-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 SUPERFAMILY SSF51621 1 342 8.72E-106 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 Gene3D G3DSA:3.50.30.10 475 586 8.9E-35 T 12-10-2018 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 12-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.7E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.7E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.7E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.7E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.7E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.7E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.7E-81 T 12-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 Gene3D G3DSA:2.40.33.10 71 167 2.1E-150 T 12-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 SUPERFAMILY SSF52009 466 583 5.76E-29 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 SUPERFAMILY SSF50800 70 167 5.06E-26 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 507 576 1.1E-21 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BEN31_03225 4423bd8e822b6b4622cc7dffdb9e3654 586 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 470 1.9E-36 T 12-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 BEN31_13970 18266cf9275cbed1928eabeb5c6217fb 254 SUPERFAMILY SSF56281 1 240 4.47E-19 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_13970 18266cf9275cbed1928eabeb5c6217fb 254 Pfam PF13483 Beta-lactamase superfamily domain 3 205 9.8E-11 T 12-10-2018 BEN31_13970 18266cf9275cbed1928eabeb5c6217fb 254 Gene3D G3DSA:3.60.15.10 1 254 2.4E-66 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_00660 72b88a86fe3941c9f7a2c541f29ca05d 305 Gene3D G3DSA:3.40.190.120 139 243 3.0E-98 T 12-10-2018 BEN31_00660 72b88a86fe3941c9f7a2c541f29ca05d 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 300 9.4E-62 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BEN31_00660 72b88a86fe3941c9f7a2c541f29ca05d 305 SUPERFAMILY SSF53850 35 303 2.82E-68 T 12-10-2018 BEN31_00660 72b88a86fe3941c9f7a2c541f29ca05d 305 Gene3D G3DSA:3.40.190.10 38 299 3.0E-98 T 12-10-2018 BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 SUPERFAMILY SSF55785 25 127 3.66E-26 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 SMART SM00086 88 130 1.1E-6 T 12-10-2018 IPR001610 PAC motif BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 Pfam PF08448 PAS fold 28 131 4.7E-16 T 12-10-2018 IPR013656 PAS fold-4 BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 Gene3D G3DSA:1.10.287.950 123 306 4.3E-33 T 12-10-2018 BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 Gene3D G3DSA:3.30.450.20 4 122 2.3E-21 T 12-10-2018 BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 171 303 1.9E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 134 1.1E-21 T 12-10-2018 IPR000014 PAS domain BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 SUPERFAMILY SSF58104 104 304 6.8E-40 T 12-10-2018 BEN31_03335 6df87dad7a27a2e32bec72efffc77d8c 306 SMART SM00283 102 306 1.5E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_13770 22121899520ddb26117bf41704297c17 444 Gene3D G3DSA:1.10.4100.10 23 416 2.3E-110 T 12-10-2018 BEN31_13770 22121899520ddb26117bf41704297c17 444 Pfam PF03972 MmgE/PrpD family 4 426 7.0E-95 T 12-10-2018 IPR005656 MmgE/PrpD GO:0016829 BEN31_13770 22121899520ddb26117bf41704297c17 444 Gene3D G3DSA:3.30.1330.120 267 400 2.3E-110 T 12-10-2018 BEN31_13770 22121899520ddb26117bf41704297c17 444 SUPERFAMILY SSF103378 1 436 9.15E-95 T 12-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 BEN31_01970 aacb2b9cb75150bb27dbaa72aae65070 224 Pfam PF04298 Putative neutral zinc metallopeptidase 4 218 3.0E-88 T 12-10-2018 IPR007395 Putative neutral zinc metallopeptidase BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 Pfam PF03471 Transporter associated domain 356 430 1.1E-15 T 12-10-2018 IPR005170 Transporter-associated domain BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 Pfam PF01595 Domain of unknown function DUF21 12 202 7.7E-47 T 12-10-2018 IPR002550 CNNM, transmembrane domain BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 SUPERFAMILY SSF54631 205 342 5.05E-29 T 12-10-2018 BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 SMART SM01091 355 432 2.8E-17 T 12-10-2018 IPR005170 Transporter-associated domain BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 Gene3D G3DSA:3.30.465.10 349 437 2.2E-15 T 12-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 SUPERFAMILY SSF56176 353 429 2.73E-15 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 Gene3D G3DSA:3.10.580.10 197 348 3.3E-48 T 12-10-2018 BEN31_11135 6468566de331cb66bd4601fd936ffedb 460 Pfam PF00571 CBS domain 223 271 4.2E-6 T 12-10-2018 IPR000644 CBS domain BEN31_10105 228252869ed5092b8e585d96f497fac8 171 Gene3D G3DSA:3.90.1140.10 1 170 2.7E-43 T 12-10-2018 BEN31_10105 228252869ed5092b8e585d96f497fac8 171 SUPERFAMILY SSF55144 1 168 4.88E-34 T 12-10-2018 IPR009097 Cyclic phosphodiesterase BEN31_10105 228252869ed5092b8e585d96f497fac8 171 Pfam PF13563 2'-5' RNA ligase superfamily 11 153 3.5E-24 T 12-10-2018 BEN31_10105 228252869ed5092b8e585d96f497fac8 171 Hamap MF_01444 Putative phosphoesterase . 1 168 39.263 T 12-10-2018 IPR022932 Putative phosphoesterase YjcG BEN31_12255 cfed918eae6619098e7f764b03e6fe2e 357 SUPERFAMILY SSF53448 3 156 5.63E-30 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_12255 cfed918eae6619098e7f764b03e6fe2e 357 SUPERFAMILY SSF48452 195 347 9.49E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_12255 cfed918eae6619098e7f764b03e6fe2e 357 Pfam PF00535 Glycosyl transferase family 2 5 124 2.2E-22 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_12255 cfed918eae6619098e7f764b03e6fe2e 357 SMART SM00028 310 343 18.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_12255 cfed918eae6619098e7f764b03e6fe2e 357 SMART SM00028 266 299 6.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_12255 cfed918eae6619098e7f764b03e6fe2e 357 Gene3D G3DSA:1.25.40.10 184 355 7.0E-15 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_12255 cfed918eae6619098e7f764b03e6fe2e 357 Gene3D G3DSA:3.90.550.10 1 177 1.8E-28 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_08250 d7539ac03ea9c6e890f989bc2994909b 300 Gene3D G3DSA:3.40.50.450 22 296 4.6E-92 T 12-10-2018 BEN31_08250 d7539ac03ea9c6e890f989bc2994909b 300 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 289 5.4E-79 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BEN31_08250 d7539ac03ea9c6e890f989bc2994909b 300 SUPERFAMILY SSF102405 83 289 2.44E-33 T 12-10-2018 BEN31_08250 d7539ac03ea9c6e890f989bc2994909b 300 Pfam PF02481 DNA recombination-mediator protein A 75 280 3.0E-75 T 12-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 BEN31_16980 fea73532a029f2bb4ebcdac8e39f6d16 222 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 216 28.749 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16980 fea73532a029f2bb4ebcdac8e39f6d16 222 SUPERFAMILY SSF51391 8 214 8.5E-70 T 12-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16980 fea73532a029f2bb4ebcdac8e39f6d16 222 Gene3D G3DSA:3.20.20.70 1 220 1.2E-78 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_16980 fea73532a029f2bb4ebcdac8e39f6d16 222 Pfam PF02581 Thiamine monophosphate synthase 15 198 3.1E-61 T 12-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_16980 fea73532a029f2bb4ebcdac8e39f6d16 222 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 14 211 2.0E-68 T 12-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 SMART SM00342 193 276 8.3E-30 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 Pfam PF12833 Helix-turn-helix domain 199 277 2.9E-22 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 SUPERFAMILY SSF51215 45 161 4.05E-13 T 12-10-2018 IPR037923 Transcription regulator HTH-like BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 Gene3D G3DSA:2.60.120.280 39 153 3.4E-7 T 12-10-2018 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 12-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 Gene3D G3DSA:1.10.10.60 174 234 8.3E-13 T 12-10-2018 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 SUPERFAMILY SSF46689 178 227 4.26E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 Pfam PF02311 AraC-like ligand binding domain 35 157 6.1E-9 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 Gene3D G3DSA:1.10.10.2730 235 277 5.1E-17 T 12-10-2018 BEN31_17025 04b154134d67b8daec857f23f11a89fd 281 SUPERFAMILY SSF46689 229 278 2.24E-12 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_17220 5b0685e028b3f82ca01d708538388e36 246 Pfam PF00483 Nucleotidyl transferase 2 235 2.2E-50 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN31_17220 5b0685e028b3f82ca01d708538388e36 246 Gene3D G3DSA:3.90.550.10 1 246 1.2E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17220 5b0685e028b3f82ca01d708538388e36 246 SUPERFAMILY SSF53448 2 235 1.15E-64 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_07165 d1109ac88de55f6f3e13bb29d462e8ab 511 SUPERFAMILY SSF75005 41 383 3.43E-54 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN31_07165 d1109ac88de55f6f3e13bb29d462e8ab 511 SMART SM00606 378 510 5.5E-52 T 12-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 BEN31_07165 d1109ac88de55f6f3e13bb29d462e8ab 511 SUPERFAMILY SSF49785 379 509 1.04E-27 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN31_07165 d1109ac88de55f6f3e13bb29d462e8ab 511 Gene3D G3DSA:2.115.10.20 33 375 4.5E-118 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN31_07165 d1109ac88de55f6f3e13bb29d462e8ab 511 Pfam PF04616 Glycosyl hydrolases family 43 47 361 1.1E-29 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BEN31_07165 d1109ac88de55f6f3e13bb29d462e8ab 511 Pfam PF03422 Carbohydrate binding module (family 6) 386 510 1.5E-34 T 12-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 BEN31_07165 d1109ac88de55f6f3e13bb29d462e8ab 511 Gene3D G3DSA:2.60.120.260 376 511 2.5E-46 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN31_05945 57701e748db0f823f041d70a60984187 340 SUPERFAMILY SSF52418 73 334 4.32E-87 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_05945 57701e748db0f823f041d70a60984187 340 Gene3D G3DSA:1.20.970.10 4 67 5.3E-18 T 12-10-2018 BEN31_05945 57701e748db0f823f041d70a60984187 340 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 3.1E-106 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_05945 57701e748db0f823f041d70a60984187 340 Gene3D G3DSA:3.40.1030.10 69 339 7.7E-100 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_05945 57701e748db0f823f041d70a60984187 340 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 38.482 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BEN31_05945 57701e748db0f823f041d70a60984187 340 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 330 2.1E-126 T 12-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 BEN31_05945 57701e748db0f823f041d70a60984187 340 SUPERFAMILY SSF47648 2 66 3.14E-15 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_05945 57701e748db0f823f041d70a60984187 340 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 64 8.2E-16 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_11360 9009b1d3d44d289fe05f2e7ab51ae89e 387 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 7 385 31.668 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 BEN31_11360 9009b1d3d44d289fe05f2e7ab51ae89e 387 Pfam PF04285 Protein of unknown function (DUF444) 195 383 3.2E-69 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 BEN31_11360 9009b1d3d44d289fe05f2e7ab51ae89e 387 Pfam PF04285 Protein of unknown function (DUF444) 13 188 4.5E-35 T 12-10-2018 IPR006698 Uncharacterised protein family UPF0229 BEN31_11360 9009b1d3d44d289fe05f2e7ab51ae89e 387 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 9 380 2.8E-185 T 12-10-2018 IPR014230 Sporulation protein YhbH BEN31_12620 139e6f73c0b247814fbebe09243199db 189 Pfam PF00551 Formyl transferase 2 182 3.2E-59 T 12-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_12620 139e6f73c0b247814fbebe09243199db 189 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.336 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BEN31_12620 139e6f73c0b247814fbebe09243199db 189 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 12-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_12620 139e6f73c0b247814fbebe09243199db 189 SUPERFAMILY SSF53328 2 187 7.85E-58 T 12-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 BEN31_12620 139e6f73c0b247814fbebe09243199db 189 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 187 3.6E-72 T 12-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 BEN31_12620 139e6f73c0b247814fbebe09243199db 189 Gene3D G3DSA:3.40.50.170 1 187 2.3E-71 T 12-10-2018 BEN31_00675 c07f16126336b696bc680dca0f689e0f 133 SUPERFAMILY SSF47413 1 63 7.32E-15 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_00675 c07f16126336b696bc680dca0f689e0f 133 Pfam PF13560 Helix-turn-helix domain 3 61 1.1E-13 T 12-10-2018 BEN31_00675 c07f16126336b696bc680dca0f689e0f 133 SMART SM00530 6 62 4.1E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00675 c07f16126336b696bc680dca0f689e0f 133 Gene3D G3DSA:1.10.260.40 1 93 3.3E-16 T 12-10-2018 BEN31_04525 6ed9f93b02b771599632cfb28766d3e6 88 Pfam PF01649 Ribosomal protein S20 2 84 6.3E-27 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04525 6ed9f93b02b771599632cfb28766d3e6 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.279 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04525 6ed9f93b02b771599632cfb28766d3e6 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.0E-31 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04525 6ed9f93b02b771599632cfb28766d3e6 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 88 8.0E-25 T 12-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04525 6ed9f93b02b771599632cfb28766d3e6 88 Gene3D G3DSA:1.20.58.110 1 87 1.1E-29 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04525 6ed9f93b02b771599632cfb28766d3e6 88 SUPERFAMILY SSF46992 3 86 6.8E-29 T 12-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_01925 53891942d127a251e4cd63cb3ca47e2c 130 Gene3D G3DSA:2.40.50.140 2 88 9.2E-33 T 12-10-2018 BEN31_01925 53891942d127a251e4cd63cb3ca47e2c 130 SMART SM00316 6 77 3.0E-26 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_01925 53891942d127a251e4cd63cb3ca47e2c 130 SUPERFAMILY SSF50249 5 87 6.22E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_01925 53891942d127a251e4cd63cb3ca47e2c 130 Pfam PF00575 S1 RNA binding domain 4 77 7.6E-21 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_06350 c7b391a679c59237eb076af6de59c009 207 SUPERFAMILY SSF69593 30 206 1.2E-9 T 12-10-2018 BEN31_10845 8a687f1da3a68ca3feea2fbd521d9eb5 247 Gene3D G3DSA:3.60.15.10 1 244 9.1E-86 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_10845 8a687f1da3a68ca3feea2fbd521d9eb5 247 SMART SM00849 18 211 1.6E-9 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_10845 8a687f1da3a68ca3feea2fbd521d9eb5 247 Pfam PF12706 Beta-lactamase superfamily domain 30 211 1.0E-17 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_10845 8a687f1da3a68ca3feea2fbd521d9eb5 247 SUPERFAMILY SSF56281 1 242 4.82E-55 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_03205 186a955b86f982cf9954b70b2978d096 410 SUPERFAMILY SSF53223 6 158 4.82E-56 T 12-10-2018 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 Gene3D G3DSA:3.40.50.720 158 410 1.4E-88 T 12-10-2018 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 SUPERFAMILY SSF51735 160 404 3.02E-84 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_03205 186a955b86f982cf9954b70b2978d096 410 PIRSF PIRSF000106 35 407 9.5E-85 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 SMART SM00919 160 384 4.0E-133 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 1.2E-25 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 SMART SM01274 15 148 2.8E-82 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 Gene3D G3DSA:3.40.50.10380 1 157 4.5E-74 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BEN31_03205 186a955b86f982cf9954b70b2978d096 410 Pfam PF00390 Malic enzyme, N-terminal domain 16 148 9.9E-30 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN31_05390 5a194aff4bd1200f268a5ab51956ff56 537 SUPERFAMILY SSF53187 6 516 6.01E-25 T 12-10-2018 BEN31_05390 5a194aff4bd1200f268a5ab51956ff56 537 Gene3D G3DSA:3.40.630.10 4 236 3.7E-34 T 12-10-2018 BEN31_05390 5a194aff4bd1200f268a5ab51956ff56 537 Pfam PF01546 Peptidase family M20/M25/M40 126 332 2.1E-9 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_05390 5a194aff4bd1200f268a5ab51956ff56 537 PIRSF PIRSF010386 1 537 7.8E-214 T 12-10-2018 IPR012166 Uncharacterised protein family RocB BEN31_05390 5a194aff4bd1200f268a5ab51956ff56 537 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 77 86 - T 12-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 BEN31_15540 7218136de4b823f8e6d7ac77572cb715 117 Hamap MF_01159 Initiation-control protein YabA. 1 116 25.535 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 BEN31_15540 7218136de4b823f8e6d7ac77572cb715 117 Pfam PF06156 Initiation control protein YabA 1 112 3.3E-39 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 BEN31_15540 7218136de4b823f8e6d7ac77572cb715 117 PIRSF PIRSF021439 1 117 2.1E-43 T 12-10-2018 IPR010377 Initiation control protein YabA GO:0006260 BEN31_01085 5245a988c8c9b22887d205fd31b273ca 289 Gene3D G3DSA:3.30.420.40 105 289 2.0E-65 T 12-10-2018 BEN31_01085 5245a988c8c9b22887d205fd31b273ca 289 ProSitePatterns PS01125 ROK family signature. 130 155 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_01085 5245a988c8c9b22887d205fd31b273ca 289 SUPERFAMILY SSF53067 1 286 1.52E-48 T 12-10-2018 BEN31_01085 5245a988c8c9b22887d205fd31b273ca 289 Gene3D G3DSA:3.30.420.40 1 104 3.1E-30 T 12-10-2018 BEN31_01085 5245a988c8c9b22887d205fd31b273ca 289 Pfam PF00480 ROK family 4 284 3.5E-71 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_06320 86e8019ad3d06eab41dc460d49a01913 144 Pfam PF06491 Disulphide isomerase 8 144 1.4E-61 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BEN31_06320 86e8019ad3d06eab41dc460d49a01913 144 Gene3D G3DSA:3.40.30.10 25 144 6.8E-54 T 12-10-2018 BEN31_06320 86e8019ad3d06eab41dc460d49a01913 144 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 3.4E-64 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BEN31_08400 413dea4bcb381f707def77d8bbbf67e6 214 Gene3D G3DSA:3.40.50.10240 1 214 9.1E-80 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BEN31_08400 413dea4bcb381f707def77d8bbbf67e6 214 SUPERFAMILY SSF63999 3 129 1.2E-33 T 12-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BEN31_08400 413dea4bcb381f707def77d8bbbf67e6 214 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 210 3.3E-66 T 12-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BEN31_08400 413dea4bcb381f707def77d8bbbf67e6 214 SUPERFAMILY SSF63862 133 213 7.72E-17 T 12-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BEN31_08400 413dea4bcb381f707def77d8bbbf67e6 214 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 144 207 2.1E-18 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BEN31_08400 413dea4bcb381f707def77d8bbbf67e6 214 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 23 128 2.1E-20 T 12-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BEN31_08400 413dea4bcb381f707def77d8bbbf67e6 214 SMART SM00983 142 208 7.9E-28 T 12-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 BEN31_06880 a8f04b03a41dcafa74028486a4f96107 186 Gene3D G3DSA:2.160.10.10 2 185 2.0E-54 T 12-10-2018 BEN31_06880 a8f04b03a41dcafa74028486a4f96107 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 93 121 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BEN31_06880 a8f04b03a41dcafa74028486a4f96107 186 SUPERFAMILY SSF51161 34 174 1.66E-39 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_06880 a8f04b03a41dcafa74028486a4f96107 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 84 119 4.5E-9 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_02900 72ba16bd4ad2d3cd7ecd59ab3a44b964 139 Pfam PF06103 Bacterial protein of unknown function (DUF948) 8 94 2.0E-27 T 12-10-2018 IPR009293 Uncharacterised protein family UPF0478 BEN31_02900 72ba16bd4ad2d3cd7ecd59ab3a44b964 139 SUPERFAMILY SSF58104 27 128 2.09E-5 T 12-10-2018 BEN31_02900 72ba16bd4ad2d3cd7ecd59ab3a44b964 139 Gene3D G3DSA:1.10.287.950 20 136 1.1E-5 T 12-10-2018 BEN31_01235 7bbab223e3e73b2d9e06d43a5db526db 122 PRINTS PR01077 Claudin family signature 2 23 1.5E-5 T 12-10-2018 BEN31_01235 7bbab223e3e73b2d9e06d43a5db526db 122 PRINTS PR01077 Claudin family signature 39 63 1.5E-5 T 12-10-2018 BEN31_13520 41a9dbfef63230757e4e2cba112a2f7e 696 Gene3D G3DSA:2.60.120.260 41 172 1.2E-15 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN31_13520 41a9dbfef63230757e4e2cba112a2f7e 696 Gene3D G3DSA:2.60.120.260 331 471 1.9E-15 T 12-10-2018 IPR008979 Galactose-binding-like domain superfamily BEN31_13520 41a9dbfef63230757e4e2cba112a2f7e 696 Pfam PF03170 Bacterial cellulose synthase subunit 56 581 1.3E-36 T 12-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 BEN31_16830 a648d9a8328fdca05d46ead553e3d599 345 SMART SM00656 62 282 4.1E-32 T 12-10-2018 IPR002022 Pectate lyase BEN31_16830 a648d9a8328fdca05d46ead553e3d599 345 Pfam PF00544 Pectate lyase 111 276 3.3E-36 T 12-10-2018 IPR002022 Pectate lyase BEN31_16830 a648d9a8328fdca05d46ead553e3d599 345 SUPERFAMILY SSF51126 49 343 1.14E-80 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_16830 a648d9a8328fdca05d46ead553e3d599 345 Gene3D G3DSA:2.160.20.10 46 344 2.1E-102 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_16440 8e228937a3c9673d1fba240ccf2c8b13 442 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 2 442 2.3E-158 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BEN31_16440 8e228937a3c9673d1fba240ccf2c8b13 442 PIRSF PIRSF002746 1 442 1.1E-158 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BEN31_16440 8e228937a3c9673d1fba240ccf2c8b13 442 Pfam PF02447 GntP family permease 1 440 6.9E-166 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BEN31_07440 b743c21342d20d6e1fe77fa6ae3af060 215 Gene3D G3DSA:3.40.50.1390 1 152 2.9E-26 T 12-10-2018 BEN31_07440 b743c21342d20d6e1fe77fa6ae3af060 215 Pfam PF00239 Resolvase, N terminal domain 3 147 5.3E-24 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BEN31_07440 b743c21342d20d6e1fe77fa6ae3af060 215 SMART SM00857 3 149 5.8E-33 T 12-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BEN31_07440 b743c21342d20d6e1fe77fa6ae3af060 215 SUPERFAMILY SSF53041 1 148 7.59E-25 T 12-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BEN31_04340 e1a50dfb24c27836d415ecceeb299bc7 222 Gene3D G3DSA:3.40.50.300 1 222 4.6E-42 T 12-10-2018 BEN31_04340 e1a50dfb24c27836d415ecceeb299bc7 222 Pfam PF00005 ABC transporter 23 168 6.9E-21 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_04340 e1a50dfb24c27836d415ecceeb299bc7 222 SUPERFAMILY SSF52540 4 219 1.07E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04340 e1a50dfb24c27836d415ecceeb299bc7 222 SMART SM00382 32 218 4.9E-6 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 SUPERFAMILY SSF111304 1 198 1.83E-79 T 12-10-2018 IPR023627 Recombination protein RecR BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 Pfam PF02132 RecR protein 40 78 1.3E-17 T 12-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 12-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 Gene3D G3DSA:1.10.8.420 1 53 3.9E-20 T 12-10-2018 BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 TIGRFAM TIGR00615 recR: recombination protein RecR 1 196 1.3E-91 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 112.154 T 12-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 SMART SM00493 80 165 1.5E-19 T 12-10-2018 IPR006171 TOPRIM domain BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 Pfam PF13662 Toprim domain 80 171 2.7E-26 T 12-10-2018 IPR006171 TOPRIM domain BEN31_15625 cae0eec3a593ce858ac6141e299e79cd 198 Gene3D G3DSA:3.40.1360.10 77 198 6.7E-50 T 12-10-2018 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 SUPERFAMILY SSF53067 1 157 1.15E-57 T 12-10-2018 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 Gene3D G3DSA:2.60.34.10 353 493 1.5E-66 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 Gene3D G3DSA:3.90.640.10 198 279 1.0E-152 T 12-10-2018 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 Gene3D G3DSA:3.30.420.40 5 347 1.0E-152 T 12-10-2018 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 1.0E-287 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 SUPERFAMILY SSF100920 354 510 6.93E-63 T 12-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 Pfam PF00012 Hsp70 protein 76 573 2.7E-224 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 12-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 Gene3D G3DSA:1.20.1270.10 494 577 2.2E-17 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 SUPERFAMILY SSF53067 160 351 5.01E-68 T 12-10-2018 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 SUPERFAMILY SSF100934 477 580 1.96E-13 T 12-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 Gene3D G3DSA:3.30.420.40 159 337 1.0E-152 T 12-10-2018 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 606 37.47 T 12-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 358 377 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 439 455 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 172 182 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 304 320 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 112 132 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_04565 58d2d01938d138cc0b46ce89a10b3fa6 613 PRINTS PR00301 70kDa heat shock protein signature 335 355 1.3E-78 T 12-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 406 3.6E-169 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 140.486 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 Gene3D G3DSA:3.10.20.340 278 406 1.4E-46 T 12-10-2018 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 Pfam PF01960 ArgJ family 24 406 2.9E-146 T 12-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 SUPERFAMILY SSF56266 19 402 1.96E-134 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 35 406 6.0E-169 T 12-10-2018 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 Gene3D G3DSA:3.30.2330.10 193 277 1.6E-32 T 12-10-2018 BEN31_10445 938695fc32b19710ea417006afdb2fc0 406 Gene3D G3DSA:3.60.70.12 5 192 3.5E-66 T 12-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 BEN31_02125 453331bc56bbf5150a16230d94f37301 118 Gene3D G3DSA:2.40.10.370 1 118 1.9E-42 T 12-10-2018 IPR038667 XkdH-like superfamily BEN31_02125 453331bc56bbf5150a16230d94f37301 118 ProDom PD031312 YQBH LIN1274 PHAGE XKDH PHAGE-LIKE PBSX RELATED ELEMENT 1 114 1.0E-36 T 12-10-2018 IPR024556 Protein of unknown function DUF3599 BEN31_02125 453331bc56bbf5150a16230d94f37301 118 Pfam PF12206 Domain of unknown function (DUF3599) 1 116 2.2E-57 T 12-10-2018 IPR024556 Protein of unknown function DUF3599 BEN31_00925 04af3ee97fed555c8c571a36268da575 459 Gene3D G3DSA:2.60.40.3350 16 125 1.5E-6 T 12-10-2018 BEN31_00925 04af3ee97fed555c8c571a36268da575 459 Pfam PF10651 Domain of unknown function (DUF2479) 4 147 9.1E-33 T 12-10-2018 IPR018913 Domain of unknown function DUF2479 BEN31_05000 423c8bdba7600dea60bcf494e73cc278 265 Pfam PF11079 Bacterial protein YqhG of unknown function 1 259 4.5E-122 T 12-10-2018 IPR024562 Uncharacterised protein family YqhG BEN31_05000 423c8bdba7600dea60bcf494e73cc278 265 ProDom PD123329 YQHG BH2818 1 260 3.0E-93 T 12-10-2018 IPR024562 Uncharacterised protein family YqhG BEN31_16260 2271a090de8d71d7f8867bbf7be377ce 448 Pfam PF00324 Amino acid permease 14 440 2.4E-102 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_16260 2271a090de8d71d7f8867bbf7be377ce 448 Gene3D G3DSA:1.20.1740.10 4 448 1.7E-61 T 12-10-2018 BEN31_16260 2271a090de8d71d7f8867bbf7be377ce 448 PIRSF PIRSF006060 1 448 3.0E-65 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_16260 2271a090de8d71d7f8867bbf7be377ce 448 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_06550 cd29d9ba5cd897de3e75786e852e71d1 304 SUPERFAMILY SSF103481 47 151 2.22E-10 T 12-10-2018 BEN31_06550 cd29d9ba5cd897de3e75786e852e71d1 304 TIGRFAM TIGR00688 rarD: protein RarD 11 268 7.9E-92 T 12-10-2018 IPR004626 RarD protein GO:0005887 BEN31_06550 cd29d9ba5cd897de3e75786e852e71d1 304 Pfam PF00892 EamA-like transporter family 11 151 7.7E-12 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_06550 cd29d9ba5cd897de3e75786e852e71d1 304 Pfam PF00892 EamA-like transporter family 160 291 5.0E-11 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_06550 cd29d9ba5cd897de3e75786e852e71d1 304 SUPERFAMILY SSF103481 192 294 5.62E-11 T 12-10-2018 BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 SMART SM00072 4 187 3.0E-80 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 37.244 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 SUPERFAMILY SSF52540 3 190 3.27E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 Gene3D G3DSA:3.30.63.10 37 96 7.6E-69 T 12-10-2018 BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 Pfam PF00625 Guanylate kinase 7 184 5.4E-55 T 12-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 12-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 5.7E-74 T 12-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 BEN31_08460 8142829bb9ba74ddd24b1da5ee7d419a 204 Gene3D G3DSA:3.40.50.300 9 183 7.6E-69 T 12-10-2018 BEN31_06480 25b349bbee38bfef84a79eb66a7f3f72 56 ProDom PD052277 YOZD 1 53 2.0E-15 T 12-10-2018 BEN31_06480 25b349bbee38bfef84a79eb66a7f3f72 56 Pfam PF14162 YozD-like protein 1 53 1.2E-30 T 12-10-2018 IPR025545 YozD-like protein BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Gene3D G3DSA:3.40.50.11610 731 938 2.9E-152 T 12-10-2018 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 17 50 1.8E-7 T 12-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Gene3D G3DSA:3.40.50.12470 553 813 2.9E-152 T 12-10-2018 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 SUPERFAMILY SSF52518 577 797 3.73E-42 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 796 939 2.5E-39 T 12-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 SUPERFAMILY SSF52518 150 534 4.58E-73 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Pfam PF02779 Transketolase, pyrimidine binding domain 594 791 4.5E-58 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_06600 08883cf5e924d572610b114eaebb778b 944 PIRSF PIRSF000157 1 942 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 SMART SM00861 595 791 5.4E-41 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Gene3D G3DSA:3.40.50.970 153 536 1.9E-137 T 12-10-2018 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Pfam PF00676 Dehydrogenase E1 component 220 533 3.5E-89 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 939 0.0 T 12-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN31_06600 08883cf5e924d572610b114eaebb778b 944 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 2 942 23.533 T 12-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 SUPERFAMILY SSF50249 1 65 4.18E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 PIRSF PIRSF002599 1 66 3.7E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.1E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 Gene3D G3DSA:2.40.50.140 1 65 7.6E-31 T 12-10-2018 BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 SMART SM00357 3 66 2.8E-29 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 PRINTS PR00050 Cold shock protein signature 39 57 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 PRINTS PR00050 Cold shock protein signature 24 33 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_06275 086f9a31770f42a104e1845cb146a82a 66 PRINTS PR00050 Cold shock protein signature 4 19 5.0E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_13635 f2089852ad75dec64632db03af0e1324 248 SMART SM00796 10 224 1.4E-93 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BEN31_13635 f2089852ad75dec64632db03af0e1324 248 Gene3D G3DSA:3.30.1360.40 7 104 5.7E-27 T 12-10-2018 BEN31_13635 f2089852ad75dec64632db03af0e1324 248 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 15 233 9.7E-77 T 12-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 BEN31_13635 f2089852ad75dec64632db03af0e1324 248 SUPERFAMILY SSF50891 110 240 3.75E-48 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN31_13635 f2089852ad75dec64632db03af0e1324 248 Gene3D G3DSA:2.40.100.10 108 247 1.0E-59 T 12-10-2018 IPR029000 Cyclophilin-like domain superfamily BEN31_13635 f2089852ad75dec64632db03af0e1324 248 SUPERFAMILY SSF160467 11 115 2.62E-14 T 12-10-2018 BEN31_13635 f2089852ad75dec64632db03af0e1324 248 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 11 224 4.2E-73 T 12-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 SUPERFAMILY SSF53223 3 101 2.71E-32 T 12-10-2018 BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 Gene3D G3DSA:3.40.50.10860 5 262 7.5E-94 T 12-10-2018 BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 1.7E-29 T 12-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 275 8.9E-99 T 12-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 273 34.949 T 12-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 SUPERFAMILY SSF51735 102 274 5.14E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 220 1.9E-10 T 12-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase BEN31_04465 a57265ffe92b9441f872e8251af7c740 280 Gene3D G3DSA:3.40.50.720 101 241 7.5E-94 T 12-10-2018 BEN31_18570 cb33827ba577ebbeca5633f873292c6f 213 Gene3D G3DSA:3.40.190.10 6 199 2.0E-80 T 12-10-2018 BEN31_18570 cb33827ba577ebbeca5633f873292c6f 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 12-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 BEN31_18570 cb33827ba577ebbeca5633f873292c6f 213 Pfam PF01634 ATP phosphoribosyltransferase 54 204 4.4E-49 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BEN31_18570 cb33827ba577ebbeca5633f873292c6f 213 Gene3D G3DSA:3.40.190.10 95 176 2.0E-80 T 12-10-2018 BEN31_18570 cb33827ba577ebbeca5633f873292c6f 213 SUPERFAMILY SSF53850 3 207 1.32E-65 T 12-10-2018 BEN31_18570 cb33827ba577ebbeca5633f873292c6f 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 184 1.9E-61 T 12-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 BEN31_18570 cb33827ba577ebbeca5633f873292c6f 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 208 57.086 T 12-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 BEN31_16585 20a261742e4f013c18203068243c1baa 279 Gene3D G3DSA:1.10.287.950 91 277 1.6E-37 T 12-10-2018 BEN31_16585 20a261742e4f013c18203068243c1baa 279 SUPERFAMILY SSF58104 87 273 9.02E-39 T 12-10-2018 BEN31_16585 20a261742e4f013c18203068243c1baa 279 SMART SM00283 95 274 1.8E-4 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_16585 20a261742e4f013c18203068243c1baa 279 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 146 270 5.9E-26 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_02840 d10e25908fc36db47e3ea0e102d69f98 213 Pfam PF02390 Putative methyltransferase 39 206 2.2E-49 T 12-10-2018 BEN31_02840 d10e25908fc36db47e3ea0e102d69f98 213 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 209 2.1E-61 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BEN31_02840 d10e25908fc36db47e3ea0e102d69f98 213 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 29.504 T 12-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 BEN31_02840 d10e25908fc36db47e3ea0e102d69f98 213 Gene3D G3DSA:3.40.50.150 1 212 9.3E-72 T 12-10-2018 BEN31_02840 d10e25908fc36db47e3ea0e102d69f98 213 SUPERFAMILY SSF53335 29 208 7.93E-33 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 Gene3D G3DSA:2.120.10.80 21 192 6.6E-42 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 Gene3D G3DSA:2.120.10.80 193 318 2.7E-10 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 SUPERFAMILY SSF50965 31 301 1.01E-41 T 12-10-2018 IPR011043 Galactose oxidase/kelch, beta-propeller BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 Pfam PF07893 Protein of unknown function (DUF1668) 239 302 9.1E-5 T 12-10-2018 IPR012871 Protein of unknown function DUF1677, Oryza sativa BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 SMART SM00612 53 100 3.2E-12 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 SMART SM00612 101 144 0.099 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 Pfam PF01344 Kelch motif 90 134 4.9E-12 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_03595 4fe226d7dbf2899d5198d7d3ad0f33f9 438 Pfam PF01344 Kelch motif 41 86 7.7E-12 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_01240 74be864ea71229ad24cb645517210697 372 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 200 365 1.9E-26 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_01240 74be864ea71229ad24cb645517210697 372 Gene3D G3DSA:3.30.300.210 217 368 9.7E-35 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BEN31_01240 74be864ea71229ad24cb645517210697 372 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 367 5.1E-86 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 SMART SM00347 24 124 4.3E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 Pfam PF01047 MarR family 31 88 4.9E-16 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 SUPERFAMILY SSF46785 2 138 1.19E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 1.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 1.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.3E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10075 284897e588b11d06b8166c6b0a3f6a53 139 Gene3D G3DSA:1.10.10.10 2 139 1.7E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04650 492bc6815c2f1729be447bbd498df309 132 Gene3D G3DSA:3.40.140.10 1 132 2.0E-57 T 12-10-2018 BEN31_04650 492bc6815c2f1729be447bbd498df309 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN31_04650 492bc6815c2f1729be447bbd498df309 132 SUPERFAMILY SSF53927 2 130 6.63E-48 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_04650 492bc6815c2f1729be447bbd498df309 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 130 2.0E-45 T 12-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 BEN31_04650 492bc6815c2f1729be447bbd498df309 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 2.7E-16 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN31_02420 12fa65a078f485a0a3126b3602e6b331 244 SUPERFAMILY SSF109635 2 87 1.44E-12 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily BEN31_02420 12fa65a078f485a0a3126b3602e6b331 244 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 6 159 2.4E-55 T 12-10-2018 IPR014240 Regulatory protein, YteA family BEN31_02420 12fa65a078f485a0a3126b3602e6b331 244 Gene3D G3DSA:1.20.120.910 1 125 4.8E-29 T 12-10-2018 BEN31_02420 12fa65a078f485a0a3126b3602e6b331 244 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 86 114 7.7E-7 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BEN31_02420 12fa65a078f485a0a3126b3602e6b331 244 SUPERFAMILY SSF57716 88 119 2.0E-5 T 12-10-2018 BEN31_18285 248d92dde8e1165706f2abf6b15b4551 160 SUPERFAMILY SSF140566 2 130 1.7E-21 T 12-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 BEN31_18285 248d92dde8e1165706f2abf6b15b4551 160 Gene3D G3DSA:1.20.58.300 3 130 4.8E-9 T 12-10-2018 BEN31_18285 248d92dde8e1165706f2abf6b15b4551 160 Pfam PF05130 FlgN protein 1 145 6.4E-29 T 12-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 BEN31_07345 6bc244adaa4de5067ecdfb117d1255e6 95 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 87 3.5E-7 T 12-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 BEN31_07345 6bc244adaa4de5067ecdfb117d1255e6 95 SUPERFAMILY SSF89360 3 93 4.84E-14 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN31_07345 6bc244adaa4de5067ecdfb117d1255e6 95 Gene3D G3DSA:2.60.300.12 1 95 2.1E-5 T 12-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 BEN31_07345 6bc244adaa4de5067ecdfb117d1255e6 95 PIRSF PIRSF034852 1 95 7.4E-39 T 12-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 BEN31_15005 eded161d85b802607252c9bb258702a6 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 12-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15005 eded161d85b802607252c9bb258702a6 66 SUPERFAMILY SSF46561 1 63 2.62E-24 T 12-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15005 eded161d85b802607252c9bb258702a6 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 5.9E-25 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15005 eded161d85b802607252c9bb258702a6 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.254 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15005 eded161d85b802607252c9bb258702a6 66 Gene3D G3DSA:1.10.287.310 1 66 5.7E-31 T 12-10-2018 BEN31_15005 eded161d85b802607252c9bb258702a6 66 Pfam PF00831 Ribosomal L29 protein 4 60 5.5E-27 T 12-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_06155 18f618e06f87980b5f86766ee1ef8993 168 SUPERFAMILY SSF51261 12 159 3.49E-55 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_06155 18f618e06f87980b5f86766ee1ef8993 168 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 142 4.2E-52 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_06155 18f618e06f87980b5f86766ee1ef8993 168 Gene3D G3DSA:2.70.70.10 9 167 4.9E-59 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_06155 18f618e06f87980b5f86766ee1ef8993 168 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_06155 18f618e06f87980b5f86766ee1ef8993 168 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 5.3E-45 T 12-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 BEN31_10775 3618ee159914bbd4cc1e0d3ed97b919c 479 Pfam PF00155 Aminotransferase class I and II 157 473 1.7E-18 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_10775 3618ee159914bbd4cc1e0d3ed97b919c 479 Gene3D G3DSA:1.10.10.10 2 77 8.7E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_10775 3618ee159914bbd4cc1e0d3ed97b919c 479 SUPERFAMILY SSF53383 123 477 2.11E-77 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_10775 3618ee159914bbd4cc1e0d3ed97b919c 479 SMART SM00345 17 76 1.4E-12 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_10775 3618ee159914bbd4cc1e0d3ed97b919c 479 Gene3D G3DSA:3.40.640.10 111 472 4.4E-103 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10775 3618ee159914bbd4cc1e0d3ed97b919c 479 SUPERFAMILY SSF46785 5 80 8.65E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_10775 3618ee159914bbd4cc1e0d3ed97b919c 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.0E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 284 38.105 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 282 7.4E-97 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 Gene3D G3DSA:3.10.310.10 126 274 1.5E-109 T 12-10-2018 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 SUPERFAMILY SSF54506 3 284 2.36E-50 T 12-10-2018 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 Gene3D G3DSA:3.10.310.10 6 280 1.5E-109 T 12-10-2018 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 12-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 Pfam PF01678 Diaminopimelate epimerase 6 130 1.4E-33 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN31_01585 e61b10255b92b52f1187d5286a4a7555 284 Pfam PF01678 Diaminopimelate epimerase 161 276 1.7E-32 T 12-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 BEN31_05370 a06f8818e0767c0398cffadb8b8ec04c 309 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 7.0E-119 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 BEN31_05370 a06f8818e0767c0398cffadb8b8ec04c 309 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 42.24 T 12-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 BEN31_05370 a06f8818e0767c0398cffadb8b8ec04c 309 Gene3D G3DSA:3.60.15.10 1 305 1.5E-109 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_05370 a06f8818e0767c0398cffadb8b8ec04c 309 Pfam PF12706 Beta-lactamase superfamily domain 35 150 8.3E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_05370 a06f8818e0767c0398cffadb8b8ec04c 309 Pfam PF12706 Beta-lactamase superfamily domain 201 270 5.7E-10 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_05370 a06f8818e0767c0398cffadb8b8ec04c 309 SUPERFAMILY SSF56281 1 306 9.1E-89 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_03285 95670686aeb8b704e08426e8b7a48745 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 1.9E-64 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BEN31_03285 95670686aeb8b704e08426e8b7a48745 201 Gene3D G3DSA:3.40.50.300 1 201 1.5E-76 T 12-10-2018 BEN31_03285 95670686aeb8b704e08426e8b7a48745 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 29.163 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BEN31_03285 95670686aeb8b704e08426e8b7a48745 201 Pfam PF01121 Dephospho-CoA kinase 3 181 2.1E-63 T 12-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 BEN31_03285 95670686aeb8b704e08426e8b7a48745 201 SUPERFAMILY SSF52540 4 195 2.21E-43 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12490 6b981cdf15197e9f4356c718a694037d 351 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 107 7.5E-8 T 12-10-2018 BEN31_12490 6b981cdf15197e9f4356c718a694037d 351 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 6 113 2.3E-18 T 12-10-2018 IPR010033 HAD-superfamily phosphatase, subfamily IIIC BEN31_12490 6b981cdf15197e9f4356c718a694037d 351 Gene3D G3DSA:3.40.50.1000 4 148 2.2E-37 T 12-10-2018 IPR023214 HAD superfamily BEN31_12490 6b981cdf15197e9f4356c718a694037d 351 SUPERFAMILY SSF55729 178 303 5.97E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_12490 6b981cdf15197e9f4356c718a694037d 351 TIGRFAM TIGR01686 FkbH: FkbH domain 5 311 1.5E-83 T 12-10-2018 IPR010037 FkbH domain BEN31_12490 6b981cdf15197e9f4356c718a694037d 351 SUPERFAMILY SSF56784 1 115 4.67E-18 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_12490 6b981cdf15197e9f4356c718a694037d 351 Gene3D G3DSA:3.40.630.30 177 317 6.7E-7 T 12-10-2018 BEN31_09750 b943320c684e59c9e8033f3660e02227 293 Gene3D G3DSA:3.75.10.10 9 288 9.6E-77 T 12-10-2018 BEN31_09750 b943320c684e59c9e8033f3660e02227 293 SUPERFAMILY SSF55909 13 286 4.64E-72 T 12-10-2018 BEN31_09750 b943320c684e59c9e8033f3660e02227 293 Pfam PF02274 Amidinotransferase 27 285 8.1E-47 T 12-10-2018 BEN31_03785 8c038cf3160ef9f5ec3dec7f02648526 299 Gene3D G3DSA:2.40.10.340 113 189 1.5E-18 T 12-10-2018 BEN31_03785 8c038cf3160ef9f5ec3dec7f02648526 299 PIRSF PIRSF038471 1 296 4.4E-59 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BEN31_03785 8c038cf3160ef9f5ec3dec7f02648526 299 Gene3D G3DSA:2.40.10.350 190 269 7.7E-25 T 12-10-2018 BEN31_03785 8c038cf3160ef9f5ec3dec7f02648526 299 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 6 292 7.1E-88 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BEN31_03785 8c038cf3160ef9f5ec3dec7f02648526 299 Pfam PF04085 rod shape-determining protein MreC 123 281 1.5E-41 T 12-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 BEN31_11720 8a8a3b6e0f4c360b0398c621630c2f2d 164 SUPERFAMILY SSF109854 11 159 3.97E-21 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_11720 8a8a3b6e0f4c360b0398c621630c2f2d 164 Gene3D G3DSA:1.20.120.450 5 161 7.9E-24 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_11720 8a8a3b6e0f4c360b0398c621630c2f2d 164 Pfam PF12867 DinB superfamily 26 155 1.0E-12 T 12-10-2018 IPR024775 DinB-like domain BEN31_08615 2489d86a639f1e7b125e1f2450b700d3 286 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 43 281 8.7E-73 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BEN31_08615 2489d86a639f1e7b125e1f2450b700d3 286 Gene3D G3DSA:3.60.140.10 16 286 1.7E-90 T 12-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily BEN31_08615 2489d86a639f1e7b125e1f2450b700d3 286 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 49 283 5.0E-64 T 12-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase BEN31_08615 2489d86a639f1e7b125e1f2450b700d3 286 SUPERFAMILY SSF64438 35 284 8.97E-80 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 Gene3D G3DSA:1.10.720.10 1 48 1.1E-21 T 12-10-2018 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 416 220.909 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 414 1.6E-205 T 12-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 SMART SM00382 169 354 7.0E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 SUPERFAMILY SSF52540 92 370 3.34E-66 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 SMART SM00959 8 50 9.2E-15 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 Gene3D G3DSA:2.40.50.140 50 125 9.2E-29 T 12-10-2018 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 SMART SM00357 55 120 7.8E-20 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 Pfam PF07497 Rho termination factor, RNA-binding domain 54 127 3.3E-31 T 12-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 Pfam PF07498 Rho termination factor, N-terminal domain 9 49 3.4E-15 T 12-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 SUPERFAMILY SSF68912 5 49 9.42E-11 T 12-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 Gene3D G3DSA:3.40.50.300 132 414 9.9E-123 T 12-10-2018 BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 SUPERFAMILY SSF50249 52 127 4.57E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_17510 a8c6f709dafe319fff4686f5a0f6edaf 427 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 362 4.3E-19 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_16150 238d52055eca65b838227a6362907cd0 318 Pfam PF00082 Subtilase family 65 309 5.8E-37 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_16150 238d52055eca65b838227a6362907cd0 318 Gene3D G3DSA:3.40.50.200 24 316 3.1E-64 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_16150 238d52055eca65b838227a6362907cd0 318 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 105 115 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_16150 238d52055eca65b838227a6362907cd0 318 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 68 79 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN31_16150 238d52055eca65b838227a6362907cd0 318 SUPERFAMILY SSF52743 43 310 7.2E-59 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_16150 238d52055eca65b838227a6362907cd0 318 PRINTS PR00723 Subtilisin serine protease family (S8) signature 101 114 5.6E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_16150 238d52055eca65b838227a6362907cd0 318 PRINTS PR00723 Subtilisin serine protease family (S8) signature 63 82 5.6E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_16150 238d52055eca65b838227a6362907cd0 318 PRINTS PR00723 Subtilisin serine protease family (S8) signature 255 271 5.6E-13 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 SUPERFAMILY SSF46785 14 107 3.38E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 75 90 4.6E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 58 4.6E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 4.6E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 43 4.6E-14 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 Gene3D G3DSA:1.10.10.10 4 109 5.9E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 SMART SM00418 26 104 4.6E-33 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_06700 74ac1338eb0695d1504c06a04e571366 109 Pfam PF01022 Bacterial regulatory protein, arsR family 33 79 3.9E-17 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_15775 3fc214ccd728198d796cda7f77de71d9 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 12-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15775 3fc214ccd728198d796cda7f77de71d9 44 Pfam PF00468 Ribosomal protein L34 1 44 4.7E-23 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15775 3fc214ccd728198d796cda7f77de71d9 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 1.0E-7 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15775 3fc214ccd728198d796cda7f77de71d9 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.977 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15775 3fc214ccd728198d796cda7f77de71d9 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 2.3E-22 T 12-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_04470 4ba4c4880a79e101bcb996fe438d6efa 96 Gene3D G3DSA:3.30.110.60 1 96 5.9E-37 T 12-10-2018 IPR035920 YhbY-like superfamily BEN31_04470 4ba4c4880a79e101bcb996fe438d6efa 96 SMART SM01103 2 85 1.6E-41 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BEN31_04470 4ba4c4880a79e101bcb996fe438d6efa 96 SUPERFAMILY SSF75471 1 95 4.84E-31 T 12-10-2018 IPR035920 YhbY-like superfamily BEN31_04470 4ba4c4880a79e101bcb996fe438d6efa 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 2.9E-21 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BEN31_04470 4ba4c4880a79e101bcb996fe438d6efa 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 1.1E-42 T 12-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 BEN31_04470 4ba4c4880a79e101bcb996fe438d6efa 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 2.0E-39 T 12-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 PIRSF PIRSF038928 7 501 6.7E-181 T 12-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 349 357 - T 12-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 Pfam PF06628 Catalase-related immune-responsive 433 495 8.3E-22 T 12-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 ProSitePatterns PS00438 Catalase proximal active site signature. 54 70 - T 12-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 SMART SM01060 18 411 4.1E-258 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 SUPERFAMILY SSF56634 10 497 1.83E-198 T 12-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 Gene3D G3DSA:2.40.180.10 14 514 5.4E-226 T 12-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 PRINTS PR00067 Catalase signature 336 362 3.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 PRINTS PR00067 Catalase signature 31 54 3.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 PRINTS PR00067 Catalase signature 99 117 3.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 PRINTS PR00067 Catalase signature 139 157 3.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 PRINTS PR00067 Catalase signature 304 331 3.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 PRINTS PR00067 Catalase signature 120 137 3.7E-68 T 12-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_15900 7d8c03bbe9086939d30b3a7779b25316 529 Pfam PF00199 Catalase 18 406 1.2E-175 T 12-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 BEN31_12370 699c9eeb41ccaf46355d917bc9590360 323 Pfam PF01207 Dihydrouridine synthase (Dus) 15 314 2.4E-47 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN31_12370 699c9eeb41ccaf46355d917bc9590360 323 SUPERFAMILY SSF51395 13 317 2.62E-59 T 12-10-2018 BEN31_12370 699c9eeb41ccaf46355d917bc9590360 323 PIRSF PIRSF006621 1 323 2.3E-82 T 12-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN31_12370 699c9eeb41ccaf46355d917bc9590360 323 Gene3D G3DSA:3.20.20.70 13 249 1.0E-60 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_12370 699c9eeb41ccaf46355d917bc9590360 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 12-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 BEN31_05750 08308c517c61cbc139aa403469257a49 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 4.7E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 BEN31_05750 08308c517c61cbc139aa403469257a49 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 4.7E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 BEN31_05750 08308c517c61cbc139aa403469257a49 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 4.7E-8 T 12-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 BEN31_05750 08308c517c61cbc139aa403469257a49 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 1.6E-21 T 12-10-2018 BEN31_05750 08308c517c61cbc139aa403469257a49 82 Gene3D G3DSA:3.30.70.20 2 82 1.4E-34 T 12-10-2018 BEN31_05750 08308c517c61cbc139aa403469257a49 82 SUPERFAMILY SSF54862 4 72 2.89E-13 T 12-10-2018 BEN31_05235 6b39178b9ecb5179c8121252d98cd503 330 Pfam PF00676 Dehydrogenase E1 component 20 319 1.2E-106 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BEN31_05235 6b39178b9ecb5179c8121252d98cd503 330 SUPERFAMILY SSF52518 6 330 1.81E-101 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_05235 6b39178b9ecb5179c8121252d98cd503 330 Gene3D G3DSA:3.40.50.970 2 330 4.5E-117 T 12-10-2018 BEN31_00720 57109e4c2ac38720661b7f051e271d6d 355 Pfam PF00589 Phage integrase family 171 339 7.4E-23 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN31_00720 57109e4c2ac38720661b7f051e271d6d 355 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 59 115 1.8E-12 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BEN31_00720 57109e4c2ac38720661b7f051e271d6d 355 SUPERFAMILY SSF56349 58 347 1.77E-59 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN31_00720 57109e4c2ac38720661b7f051e271d6d 355 Pfam PF14657 Arm DNA-binding domain 11 51 3.0E-10 T 12-10-2018 IPR028259 AP2-like integrase, N-terminal domain BEN31_00720 57109e4c2ac38720661b7f051e271d6d 355 Gene3D G3DSA:1.10.150.130 55 162 5.4E-17 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BEN31_00720 57109e4c2ac38720661b7f051e271d6d 355 Gene3D G3DSA:1.10.443.10 163 352 5.3E-40 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN31_00680 6c68fa5470bc15f62666ad8d9c65e638 134 SUPERFAMILY SSF47413 1 66 2.04E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_00680 6c68fa5470bc15f62666ad8d9c65e638 134 Pfam PF13560 Helix-turn-helix domain 4 61 7.3E-14 T 12-10-2018 BEN31_00680 6c68fa5470bc15f62666ad8d9c65e638 134 SMART SM00530 7 63 7.6E-13 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00680 6c68fa5470bc15f62666ad8d9c65e638 134 Gene3D G3DSA:1.10.260.40 4 133 2.2E-17 T 12-10-2018 BEN31_02810 1463b3ae548000492776140d69427094 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 307 3.1E-123 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BEN31_02810 1463b3ae548000492776140d69427094 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BEN31_02810 1463b3ae548000492776140d69427094 309 Gene3D G3DSA:3.40.50.1100 45 144 2.0E-113 T 12-10-2018 BEN31_02810 1463b3ae548000492776140d69427094 309 SUPERFAMILY SSF53686 1 307 2.23E-94 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN31_02810 1463b3ae548000492776140d69427094 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 293 1.8E-68 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN31_02810 1463b3ae548000492776140d69427094 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 307 3.7E-129 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BEN31_02810 1463b3ae548000492776140d69427094 309 Gene3D G3DSA:3.40.50.1100 6 303 2.0E-113 T 12-10-2018 BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.8E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.8E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.8E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.8E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.8E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.8E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.9E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 SUPERFAMILY SSF51735 4 248 2.42E-75 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 Gene3D G3DSA:3.40.50.720 2 250 2.0E-76 T 12-10-2018 BEN31_11645 8982195a7b2b405d2a5059486314eb35 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 245 2.0E-63 T 12-10-2018 BEN31_14815 67a8d0ba66b75901e587ca9e92ed07f6 254 Pfam PF01522 Polysaccharide deacetylase 52 175 3.8E-24 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_14815 67a8d0ba66b75901e587ca9e92ed07f6 254 SUPERFAMILY SSF88713 29 243 5.93E-51 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_14815 67a8d0ba66b75901e587ca9e92ed07f6 254 Gene3D G3DSA:3.20.20.370 47 254 1.9E-56 T 12-10-2018 BEN31_14815 67a8d0ba66b75901e587ca9e92ed07f6 254 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 53 243 9.7E-80 T 12-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB BEN31_15710 7d505f87a90d4fa88c6d34a7f2684e5c 322 Pfam PF14175 YaaC-like Protein 9 308 6.8E-108 T 12-10-2018 IPR026988 YaaC-like protein BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 SUPERFAMILY SSF52922 534 666 3.14E-40 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 338 1.7E-155 T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 4.2E-45 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 12-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 SUPERFAMILY SSF52518 341 527 3.88E-69 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 Gene3D G3DSA:3.40.50.970 331 537 2.2E-80 T 12-10-2018 BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 Gene3D G3DSA:3.40.50.920 540 667 3.6E-39 T 12-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 SUPERFAMILY SSF52518 8 325 1.23E-117 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 Gene3D G3DSA:3.40.50.970 5 330 9.1E-128 T 12-10-2018 BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 Pfam PF02780 Transketolase, C-terminal domain 550 657 1.3E-9 T 12-10-2018 IPR033248 Transketolase, C-terminal domain BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 7 665 0.0 T 12-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 SMART SM00861 354 525 1.3E-70 T 12-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain BEN31_07430 7c5f43b9c8fe0fe76596c220cf618bff 667 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 12-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 BEN31_05310 66fbcccf3a46e1f2f0049358541b323d 272 PRINTS PR00701 60kDa inner membrane protein signature 129 152 7.2E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_05310 66fbcccf3a46e1f2f0049358541b323d 272 PRINTS PR00701 60kDa inner membrane protein signature 218 241 7.2E-6 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_05310 66fbcccf3a46e1f2f0049358541b323d 272 Pfam PF02096 60Kd inner membrane protein 58 251 2.7E-45 T 12-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 BEN31_05310 66fbcccf3a46e1f2f0049358541b323d 272 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 251 1.9E-51 T 12-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_05310 66fbcccf3a46e1f2f0049358541b323d 272 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 1 255 27.65 T 12-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 Gene3D G3DSA:3.20.20.100 1 278 8.5E-127 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 128 145 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 PRINTS PR00069 Aldo-keto reductase signature 199 223 1.7E-48 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 PRINTS PR00069 Aldo-keto reductase signature 96 114 1.7E-48 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 PRINTS PR00069 Aldo-keto reductase signature 128 145 1.7E-48 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 PRINTS PR00069 Aldo-keto reductase signature 162 191 1.7E-48 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 PRINTS PR00069 Aldo-keto reductase signature 40 64 1.7E-48 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 SUPERFAMILY SSF51430 8 269 7.99E-99 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 PIRSF PIRSF000097 2 280 3.9E-93 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 Pfam PF00248 Aldo/keto reductase family 29 264 8.9E-55 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_01090 51f599bb3d8b2b7014bcbdc0459447cf 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 232 247 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 Gene3D G3DSA:3.30.750.44 45 333 1.7E-98 T 12-10-2018 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 99 166 4.5E-12 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 50 374 4.9E-124 T 12-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 Gene3D G3DSA:3.90.226.10 186 355 1.7E-98 T 12-10-2018 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 Pfam PF03572 Peptidase family S41 196 356 4.4E-51 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 Gene3D G3DSA:2.30.42.10 99 185 1.7E-98 T 12-10-2018 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 SUPERFAMILY SSF52096 37 362 1.21E-67 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 SUPERFAMILY SSF50156 96 181 7.09E-17 T 12-10-2018 IPR036034 PDZ superfamily GO:0005515 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 Gene3D G3DSA:1.10.101.10 368 446 1.6E-11 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 SMART SM00228 99 170 9.0E-17 T 12-10-2018 IPR001478 PDZ domain GO:0005515 BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 Pfam PF01471 Putative peptidoglycan binding domain 380 434 6.8E-10 T 12-10-2018 IPR002477 Peptidoglycan binding-like BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 SUPERFAMILY SSF47090 368 436 3.66E-12 T 12-10-2018 IPR036365 PGBD-like superfamily BEN31_06515 f873f1c5a373d8b1b1e42ae0a4fac0e6 461 SMART SM00245 171 358 4.1E-76 T 12-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 Gene3D G3DSA:2.40.30.10 207 336 2.3E-54 T 12-10-2018 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 3.1E-25 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 3.8E-61 T 12-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 SUPERFAMILY SSF50447 204 303 1.0E-32 T 12-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily BEN31_15060 e8463299394f095c5c4680ac3826324a 396 Gene3D G3DSA:2.40.30.10 340 395 2.1E-26 T 12-10-2018 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 Gene3D G3DSA:3.40.50.300 1 204 7.5E-70 T 12-10-2018 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.11 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 4.6E-19 T 12-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 SUPERFAMILY SSF52540 6 220 8.67E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15060 e8463299394f095c5c4680ac3826324a 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 1.4E-32 T 12-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal BEN31_15060 e8463299394f095c5c4680ac3826324a 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 6.5E-233 T 12-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 SUPERFAMILY SSF50465 304 396 3.74E-35 T 12-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal BEN31_15060 e8463299394f095c5c4680ac3826324a 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 146 8.7E-16 T 12-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 BEN31_15060 e8463299394f095c5c4680ac3826324a 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 12-10-2018 IPR031157 Tr-type G domain, conserved site BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 Pfam PF00005 ABC transporter 22 160 2.0E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 SUPERFAMILY SSF52540 4 224 1.27E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 SMART SM00382 305 490 5.6E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 SMART SM00382 31 209 3.0E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 Gene3D G3DSA:3.40.50.300 2 242 1.4E-61 T 12-10-2018 BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 Gene3D G3DSA:3.40.50.300 277 528 7.2E-65 T 12-10-2018 BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 Pfam PF00005 ABC transporter 297 441 3.5E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 ProSitePatterns PS00211 ABC transporters family signature. 414 428 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16575 0f4db9d4f27a5c41da6fc7eaa4644add 532 SUPERFAMILY SSF52540 279 509 4.2E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_02845 04ffeed3f70f6301212f4b1ee6c420e8 282 SMART SM00849 50 257 5.2E-16 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_02845 04ffeed3f70f6301212f4b1ee6c420e8 282 SUPERFAMILY SSF56281 3 262 4.32E-43 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_02845 04ffeed3f70f6301212f4b1ee6c420e8 282 Gene3D G3DSA:3.60.15.10 4 269 3.5E-86 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_02845 04ffeed3f70f6301212f4b1ee6c420e8 282 Pfam PF00753 Metallo-beta-lactamase superfamily 55 244 3.7E-14 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_10895 84999b9aec8c6c41b5067c46c64a6bc2 161 SUPERFAMILY SSF54909 66 154 4.54E-19 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_10895 84999b9aec8c6c41b5067c46c64a6bc2 161 Pfam PF03992 Antibiotic biosynthesis monooxygenase 69 135 6.3E-9 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BEN31_10895 84999b9aec8c6c41b5067c46c64a6bc2 161 Gene3D G3DSA:3.30.70.3430 1 159 1.9E-51 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 Gene3D G3DSA:2.40.30.10 193 359 8.6E-123 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 SUPERFAMILY SSF160996 194 360 2.22E-44 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 412 2.2E-144 T 12-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 Gene3D G3DSA:3.50.50.60 7 408 8.6E-123 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 SUPERFAMILY SSF51905 2 415 2.6E-63 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 Gene3D G3DSA:1.10.8.260 278 342 8.6E-123 T 12-10-2018 IPR023166 HI0933-like insert domain superfamily BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.3E-8 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 367 389 2.3E-8 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 2.3E-8 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 Pfam PF03486 HI0933-like protein 4 412 1.0E-154 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 2.8E-9 T 12-10-2018 BEN31_02775 155f7b07736dc2b7ee7d3684f5dbac49 423 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-9 T 12-10-2018 BEN31_04165 c1b63bdaaa3019a94246cc1ce4caed88 213 Hamap MF_02100 Uncharacterized methyltransferase . 2 212 45.889 T 12-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 BEN31_04165 c1b63bdaaa3019a94246cc1ce4caed88 213 Gene3D G3DSA:3.40.50.150 24 213 4.8E-44 T 12-10-2018 BEN31_04165 c1b63bdaaa3019a94246cc1ce4caed88 213 Pfam PF13489 Methyltransferase domain 29 194 6.5E-12 T 12-10-2018 BEN31_04165 c1b63bdaaa3019a94246cc1ce4caed88 213 SUPERFAMILY SSF53335 8 205 1.49E-30 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_15820 a6e783259a5c737e997821039fa86543 253 PRINTS PR00091 Nitrogenase component II signature 31 46 8.7E-5 T 12-10-2018 BEN31_15820 a6e783259a5c737e997821039fa86543 253 PRINTS PR00091 Nitrogenase component II signature 9 22 8.7E-5 T 12-10-2018 BEN31_15820 a6e783259a5c737e997821039fa86543 253 SUPERFAMILY SSF52540 2 250 6.29E-72 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15820 a6e783259a5c737e997821039fa86543 253 Pfam PF13614 AAA domain 2 178 6.6E-74 T 12-10-2018 IPR025669 AAA domain BEN31_15820 a6e783259a5c737e997821039fa86543 253 PIRSF PIRSF009320 88 250 1.4E-7 T 12-10-2018 BEN31_15820 a6e783259a5c737e997821039fa86543 253 PIRSF PIRSF009320 2 84 1.2E-15 T 12-10-2018 BEN31_15820 a6e783259a5c737e997821039fa86543 253 Gene3D G3DSA:3.40.50.300 1 252 1.1E-83 T 12-10-2018 BEN31_06280 8edd16cc16520fe7f483bb2bd23e7ac3 233 Pfam PF01987 Mitochondrial biogenesis AIM24 27 221 1.2E-38 T 12-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 BEN31_06280 8edd16cc16520fe7f483bb2bd23e7ac3 233 Gene3D G3DSA:3.60.160.10 13 228 5.0E-30 T 12-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily BEN31_06280 8edd16cc16520fe7f483bb2bd23e7ac3 233 SUPERFAMILY SSF51219 27 224 3.14E-54 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BEN31_03775 87f483714823678cbf862726c71192d2 224 Gene3D G3DSA:3.40.140.10 100 224 1.9E-46 T 12-10-2018 BEN31_03775 87f483714823678cbf862726c71192d2 224 Pfam PF04002 RadC-like JAB domain 103 222 1.9E-46 T 12-10-2018 IPR025657 RadC-like JAB domain BEN31_03775 87f483714823678cbf862726c71192d2 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 12-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site BEN31_03775 87f483714823678cbf862726c71192d2 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 6.3E-87 T 12-10-2018 IPR001405 Uncharacterised protein family UPF0758 BEN31_03775 87f483714823678cbf862726c71192d2 224 Gene3D G3DSA:1.10.150.20 47 87 2.0E-7 T 12-10-2018 BEN31_03775 87f483714823678cbf862726c71192d2 224 SUPERFAMILY SSF47781 15 89 3.81E-9 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_03775 87f483714823678cbf862726c71192d2 224 SUPERFAMILY SSF102712 153 191 2.62E-5 T 12-10-2018 BEN31_11250 43f7d32b6ba21099888aa3ef77727be6 446 SUPERFAMILY SSF53383 31 444 8.92E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_11250 43f7d32b6ba21099888aa3ef77727be6 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_11250 43f7d32b6ba21099888aa3ef77727be6 446 PIRSF PIRSF000521 16 446 1.4E-32 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_11250 43f7d32b6ba21099888aa3ef77727be6 446 Gene3D G3DSA:3.90.1150.10 15 442 9.9E-151 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_11250 43f7d32b6ba21099888aa3ef77727be6 446 Gene3D G3DSA:3.40.640.10 66 336 9.9E-151 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_11250 43f7d32b6ba21099888aa3ef77727be6 446 Pfam PF00202 Aminotransferase class-III 28 441 8.1E-109 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_11805 2628caa1866d88de707b0d59b6471181 175 Gene3D G3DSA:1.20.120.450 1 175 2.0E-48 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_11805 2628caa1866d88de707b0d59b6471181 175 SUPERFAMILY SSF109854 5 173 1.53E-42 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_11805 2628caa1866d88de707b0d59b6471181 175 Pfam PF12867 DinB superfamily 28 165 1.6E-15 T 12-10-2018 IPR024775 DinB-like domain BEN31_11805 2628caa1866d88de707b0d59b6471181 175 Hamap MF_01256 Putative metal-dependent hydrolase . 2 175 36.607 T 12-10-2018 IPR023774 Putative metal-dependent hydrolase YfiT BEN31_11095 80346fd29006d95544f5b50bfb404bce 285 Pfam PF01063 Amino-transferase class IV 29 250 7.1E-48 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BEN31_11095 80346fd29006d95544f5b50bfb404bce 285 Gene3D G3DSA:3.30.470.10 3 116 6.2E-34 T 12-10-2018 BEN31_11095 80346fd29006d95544f5b50bfb404bce 285 Gene3D G3DSA:3.20.10.10 119 282 8.3E-58 T 12-10-2018 BEN31_11095 80346fd29006d95544f5b50bfb404bce 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 176 205 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BEN31_11095 80346fd29006d95544f5b50bfb404bce 285 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 2 276 2.2E-130 T 12-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 BEN31_11095 80346fd29006d95544f5b50bfb404bce 285 SUPERFAMILY SSF56752 2 277 1.83E-78 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Gene3D G3DSA:2.40.40.20 545 680 1.8E-24 T 12-10-2018 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Gene3D G3DSA:3.30.2070.10 433 521 3.0E-154 T 12-10-2018 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 418 435 - T 12-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 SUPERFAMILY SSF50692 527 678 1.81E-26 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 12 63 1.4E-15 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Pfam PF01568 Molydopterin dinucleotide binding domain 565 669 1.1E-15 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 SUPERFAMILY SSF53706 12 559 1.13E-165 T 12-10-2018 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 SMART SM00926 9 64 8.7E-17 T 12-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Gene3D G3DSA:3.40.50.740 78 478 3.0E-154 T 12-10-2018 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Gene3D G3DSA:3.40.228.10 145 543 3.0E-154 T 12-10-2018 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Gene3D G3DSA:2.20.25.90 4 69 7.0E-15 T 12-10-2018 BEN31_06775 154bbbb8d4d461f91d0494d8d9688a91 680 Pfam PF00384 Molybdopterin oxidoreductase 67 473 1.4E-60 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 Pfam PF00067 Cytochrome P450 38 374 3.1E-35 T 12-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 SUPERFAMILY SSF48264 22 400 4.45E-96 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 148 163 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 194 216 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 350 361 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 341 350 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 85 96 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 275 286 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 292 319 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 320 335 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 PRINTS PR00359 B-class P450 signature 131 147 6.2E-55 T 12-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 12-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 BEN31_16020 cba15992d51b5bdd9baee6ff6f969bdc 401 Gene3D G3DSA:1.10.630.10 1 401 1.2E-127 T 12-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 BEN31_10095 5e6c775b7df252533e81fe1534f3e8c0 372 Gene3D G3DSA:3.90.1150.10 247 278 4.2E-9 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_10095 5e6c775b7df252533e81fe1534f3e8c0 372 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_10095 5e6c775b7df252533e81fe1534f3e8c0 372 PIRSF PIRSF001434 1 366 7.8E-122 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_10095 5e6c775b7df252533e81fe1534f3e8c0 372 Gene3D G3DSA:3.90.1150.10 279 372 2.5E-25 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_10095 5e6c775b7df252533e81fe1534f3e8c0 372 Gene3D G3DSA:3.40.640.10 4 246 6.3E-88 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10095 5e6c775b7df252533e81fe1534f3e8c0 372 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 362 3.0E-138 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_10095 5e6c775b7df252533e81fe1534f3e8c0 372 SUPERFAMILY SSF53383 20 365 8.34E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 2.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 2.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 2.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 2.1E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 Pfam PF01047 MarR family 34 91 1.0E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 Gene3D G3DSA:1.10.10.10 1 141 1.9E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 SMART SM00347 27 127 3.9E-31 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_06410 dbaadc1941be752cee9b9c75062f8cbf 143 SUPERFAMILY SSF46785 10 139 2.03E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 SMART SM00342 181 263 3.3E-24 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 Pfam PF12833 Helix-turn-helix domain 190 264 1.0E-18 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 SUPERFAMILY SSF46689 165 215 1.3E-7 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 Gene3D G3DSA:1.10.10.60 162 266 4.0E-24 T 12-10-2018 BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 Gene3D G3DSA:2.60.120.10 21 103 2.0E-6 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 Pfam PF02311 AraC-like ligand binding domain 17 134 1.4E-16 T 12-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 SUPERFAMILY SSF46689 217 265 2.24E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_13560 9829477552d8ca0d47cbdce4ff3d1a3d 275 SUPERFAMILY SSF51215 14 147 3.92E-21 T 12-10-2018 IPR037923 Transcription regulator HTH-like BEN31_02115 2405d4b5ad7dccc69a2651a3d644a1cc 307 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 10 301 2.2E-10 T 12-10-2018 IPR024455 Phage capsid BEN31_02115 2405d4b5ad7dccc69a2651a3d644a1cc 307 SUPERFAMILY SSF56563 20 301 4.05E-11 T 12-10-2018 BEN31_02115 2405d4b5ad7dccc69a2651a3d644a1cc 307 Pfam PF05065 Phage capsid family 20 302 1.8E-31 T 12-10-2018 IPR024455 Phage capsid BEN31_09795 777004dec7884fec4b297995a61319d6 274 PIRSF PIRSF015853 1 271 1.9E-107 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase BEN31_09795 777004dec7884fec4b297995a61319d6 274 Gene3D G3DSA:3.40.50.10780 1 209 1.2E-77 T 12-10-2018 IPR027476 D-aminopeptidase, N-terminal BEN31_09795 777004dec7884fec4b297995a61319d6 274 SUPERFAMILY SSF63992 1 274 3.66E-103 T 12-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily BEN31_09795 777004dec7884fec4b297995a61319d6 274 Pfam PF04951 D-aminopeptidase 1 262 3.9E-96 T 12-10-2018 IPR007035 Peptidase M55, D-aminopeptidase BEN31_09795 777004dec7884fec4b297995a61319d6 274 Gene3D G3DSA:3.30.1360.130 210 274 8.5E-28 T 12-10-2018 BEN31_09775 e0cdba8462f2e918235a2a39715841c8 540 Gene3D G3DSA:3.90.76.10 71 193 7.3E-166 T 12-10-2018 BEN31_09775 e0cdba8462f2e918235a2a39715841c8 540 PIRSF PIRSF002741 1 537 4.5E-120 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BEN31_09775 e0cdba8462f2e918235a2a39715841c8 540 Gene3D G3DSA:3.40.190.10 50 525 7.3E-166 T 12-10-2018 BEN31_09775 e0cdba8462f2e918235a2a39715841c8 540 Gene3D G3DSA:3.10.105.10 293 511 7.3E-166 T 12-10-2018 BEN31_09775 e0cdba8462f2e918235a2a39715841c8 540 SUPERFAMILY SSF53850 36 533 3.62E-132 T 12-10-2018 BEN31_09775 e0cdba8462f2e918235a2a39715841c8 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 461 1.3E-85 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BEN31_09775 e0cdba8462f2e918235a2a39715841c8 540 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site BEN31_18585 c6ac4b337dc737d58bcfb138dd37711d 212 PIRSF PIRSF000495 1 207 4.4E-74 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BEN31_18585 c6ac4b337dc737d58bcfb138dd37711d 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 36.7 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BEN31_18585 c6ac4b337dc737d58bcfb138dd37711d 212 Pfam PF00117 Glutamine amidotransferase class-I 4 201 1.3E-20 T 12-10-2018 IPR017926 Glutamine amidotransferase BEN31_18585 c6ac4b337dc737d58bcfb138dd37711d 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 1.3E-70 T 12-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 BEN31_18585 c6ac4b337dc737d58bcfb138dd37711d 212 SUPERFAMILY SSF52317 2 204 1.39E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_18585 c6ac4b337dc737d58bcfb138dd37711d 212 Gene3D G3DSA:3.40.50.880 1 212 9.1E-74 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_18295 fa330ff786a41850840c6ec116238999 303 Gene3D G3DSA:1.20.1330.10 40 248 9.0E-43 T 12-10-2018 BEN31_18295 fa330ff786a41850840c6ec116238999 303 Pfam PF00700 Bacterial flagellin C-terminal helical region 221 302 4.5E-7 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_18295 fa330ff786a41850840c6ec116238999 303 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 140 1.2E-18 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_18295 fa330ff786a41850840c6ec116238999 303 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 153 2.2E-45 T 12-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 BEN31_18295 fa330ff786a41850840c6ec116238999 303 SUPERFAMILY SSF64518 1 303 1.19E-62 T 12-10-2018 BEN31_14025 b4bb0e57c352dfd342df4e3bf431f275 261 SUPERFAMILY SSF56317 1 257 1.57E-77 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN31_14025 b4bb0e57c352dfd342df4e3bf431f275 261 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 12-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site BEN31_14025 b4bb0e57c352dfd342df4e3bf431f275 261 Gene3D G3DSA:3.60.110.10 1 261 3.6E-93 T 12-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily BEN31_14025 b4bb0e57c352dfd342df4e3bf431f275 261 Pfam PF00795 Carbon-nitrogen hydrolase 2 248 1.8E-55 T 12-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 BEN31_13205 df6d6c195f380a52743dd02fc30cfa08 391 SUPERFAMILY SSF53756 1 387 9.16E-76 T 12-10-2018 BEN31_13205 df6d6c195f380a52743dd02fc30cfa08 391 Gene3D G3DSA:3.40.50.2000 207 373 2.4E-111 T 12-10-2018 BEN31_13205 df6d6c195f380a52743dd02fc30cfa08 391 Gene3D G3DSA:3.40.50.2000 3 384 2.4E-111 T 12-10-2018 BEN31_13205 df6d6c195f380a52743dd02fc30cfa08 391 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 7 389 1.8E-104 T 12-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 BEN31_13205 df6d6c195f380a52743dd02fc30cfa08 391 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 199 370 1.1E-20 T 12-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 BEN31_02530 31eb315e9359a6b40e9387a0669ff8c1 134 Pfam PF05105 Bacteriophage holin family 17 128 5.6E-24 T 12-10-2018 IPR006480 Bacteriophage holin family BEN31_02530 31eb315e9359a6b40e9387a0669ff8c1 134 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 11 132 9.8E-26 T 12-10-2018 IPR006480 Bacteriophage holin family BEN31_06375 d882136a60c6946ad445ec5d213d7707 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 279 1.4E-88 T 12-10-2018 IPR003797 DegV BEN31_06375 d882136a60c6946ad445ec5d213d7707 280 Gene3D G3DSA:3.40.50.10170 1 153 1.0E-53 T 12-10-2018 BEN31_06375 d882136a60c6946ad445ec5d213d7707 280 Gene3D G3DSA:3.30.1180.10 154 279 3.3E-36 T 12-10-2018 BEN31_06375 d882136a60c6946ad445ec5d213d7707 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 5.2E-100 T 12-10-2018 IPR003797 DegV BEN31_06375 d882136a60c6946ad445ec5d213d7707 280 SUPERFAMILY SSF82549 4 280 2.88E-90 T 12-10-2018 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.94 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 12-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 PIRSF PIRSF002162 1 177 1.6E-50 T 12-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 Pfam PF00347 Ribosomal protein L6 90 164 4.6E-20 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 Pfam PF00347 Ribosomal protein L6 11 82 1.4E-23 T 12-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 Gene3D G3DSA:3.90.930.12 83 178 6.7E-39 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 SUPERFAMILY SSF56053 1 82 3.84E-30 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 5.5E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.5E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 5.5E-34 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 Gene3D G3DSA:3.90.930.12 1 82 1.0E-34 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 SUPERFAMILY SSF56053 83 177 6.04E-34 T 12-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14970 afbeab1b2c8e551ccbe60269aa422b66 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.2E-77 T 12-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 BEN31_01620 f4de1927d50df28f6bd2496fac44bcc3 106 Pfam PF14068 Putative membrane protein 7 106 5.0E-42 T 12-10-2018 IPR025917 Putative membrane protein YuiB BEN31_14340 ddb841239919690c67c71f517bf7a296 493 Gene3D G3DSA:3.90.1300.10 3 492 4.5E-146 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_14340 ddb841239919690c67c71f517bf7a296 493 Pfam PF01425 Amidase 27 473 1.2E-86 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_14340 ddb841239919690c67c71f517bf7a296 493 ProSitePatterns PS00571 Amidases signature. 149 180 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 BEN31_14340 ddb841239919690c67c71f517bf7a296 493 SUPERFAMILY SSF75304 3 481 1.44E-117 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_00060 cd840117eef199e864f17ecb62e753b3 240 Pfam PF00929 Exonuclease 7 163 2.6E-30 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_00060 cd840117eef199e864f17ecb62e753b3 240 SUPERFAMILY SSF53098 3 175 6.28E-49 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_00060 cd840117eef199e864f17ecb62e753b3 240 SMART SM00479 5 172 1.8E-37 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_00060 cd840117eef199e864f17ecb62e753b3 240 Gene3D G3DSA:3.30.420.10 2 170 4.1E-44 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 SUPERFAMILY SSF52151 4 310 1.36E-80 T 12-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 Pfam PF00698 Acyl transferase domain 6 288 5.4E-42 T 12-10-2018 IPR014043 Acyl transferase BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 Gene3D G3DSA:3.40.366.10 6 286 6.0E-100 T 12-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 Gene3D G3DSA:3.30.70.250 124 197 6.0E-100 T 12-10-2018 BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 4.4E-121 T 12-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 PIRSF PIRSF000446 1 311 3.7E-128 T 12-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 8.7E-49 T 12-10-2018 IPR020801 Polyketide synthase, acyl transferase domain BEN31_08350 08057ce3bbcc28d45428657ab92bf106 314 SUPERFAMILY SSF55048 128 192 4.97E-15 T 12-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding BEN31_01485 936e63f86a831c5953b225f28f1b804a 101 SUPERFAMILY SSF102891 2 99 1.7E-33 T 12-10-2018 IPR036493 Hypothetical protein YunC superfamily BEN31_01485 936e63f86a831c5953b225f28f1b804a 101 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 2.5E-24 T 12-10-2018 IPR014931 Protein of unknown function DUF1805 BEN31_01485 936e63f86a831c5953b225f28f1b804a 101 Gene3D G3DSA:3.30.1980.10 1 100 1.9E-23 T 12-10-2018 IPR036493 Hypothetical protein YunC superfamily BEN31_03460 d292b191417131a4e2f8a801e223349c 194 SUPERFAMILY SSF48498 78 191 5.24E-32 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_03460 d292b191417131a4e2f8a801e223349c 194 Gene3D G3DSA:1.10.357.10 50 194 1.0E-41 T 12-10-2018 BEN31_03460 d292b191417131a4e2f8a801e223349c 194 Pfam PF08359 YsiA-like protein, C-terminal region 58 190 3.5E-61 T 12-10-2018 IPR013570 Transcription regulator YsiA, C-terminal BEN31_03460 d292b191417131a4e2f8a801e223349c 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 6.2E-17 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_03460 d292b191417131a4e2f8a801e223349c 194 Gene3D G3DSA:1.10.10.60 1 49 2.0E-23 T 12-10-2018 BEN31_03460 d292b191417131a4e2f8a801e223349c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_03460 d292b191417131a4e2f8a801e223349c 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.4E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_03460 d292b191417131a4e2f8a801e223349c 194 SUPERFAMILY SSF46689 6 82 1.5E-16 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_18095 1e306e0de29b938d1078c1e98a3fa2ce 749 Gene3D G3DSA:3.40.50.11820 382 742 1.9E-143 T 12-10-2018 BEN31_18095 1e306e0de29b938d1078c1e98a3fa2ce 749 Gene3D G3DSA:3.40.50.12580 553 735 1.9E-143 T 12-10-2018 BEN31_18095 1e306e0de29b938d1078c1e98a3fa2ce 749 SUPERFAMILY SSF53756 483 673 1.88E-10 T 12-10-2018 BEN31_18095 1e306e0de29b938d1078c1e98a3fa2ce 749 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 376 746 1.0E-130 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 BEN31_07615 cf81b7da9388a1f2e17d917193934077 426 Gene3D G3DSA:3.90.1150.60 17 412 4.1E-183 T 12-10-2018 BEN31_07615 cf81b7da9388a1f2e17d917193934077 426 Pfam PF06838 Methionine gamma-lyase 13 415 4.5E-211 T 12-10-2018 IPR009651 Putative methionine gamma-lyase BEN31_07615 cf81b7da9388a1f2e17d917193934077 426 SUPERFAMILY SSF53383 50 399 1.55E-47 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_07615 cf81b7da9388a1f2e17d917193934077 426 Gene3D G3DSA:3.40.640.10 58 272 4.1E-183 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_15500 47108dec66655313a53297d99640c9eb 186 Pfam PF13331 Domain of unknown function (DUF4093) 93 176 5.9E-28 T 12-10-2018 IPR025156 Ribonuclease M5, C-terminal domain BEN31_15500 47108dec66655313a53297d99640c9eb 186 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 178 32.126 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 BEN31_15500 47108dec66655313a53297d99640c9eb 186 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 177 3.3E-69 T 12-10-2018 IPR004466 Ribonuclease M5 GO:0043822 BEN31_15500 47108dec66655313a53297d99640c9eb 186 SMART SM00493 4 77 1.1E-6 T 12-10-2018 IPR006171 TOPRIM domain BEN31_15500 47108dec66655313a53297d99640c9eb 186 Gene3D G3DSA:3.40.1360.20 1 116 4.3E-25 T 12-10-2018 BEN31_15500 47108dec66655313a53297d99640c9eb 186 SUPERFAMILY SSF110455 1 116 6.8E-35 T 12-10-2018 BEN31_15500 47108dec66655313a53297d99640c9eb 186 Pfam PF13662 Toprim domain 4 71 5.1E-6 T 12-10-2018 IPR006171 TOPRIM domain BEN31_08870 e40fe2f61285ad845e9e9debd8cd42a8 109 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 3 109 8.3E-54 T 12-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 BEN31_08870 e40fe2f61285ad845e9e9debd8cd42a8 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 29 100 3.3E-15 T 12-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 BEN31_08785 9707bc03c96138a32584e9dcab083dc9 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.124 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08785 9707bc03c96138a32584e9dcab083dc9 57 SUPERFAMILY SSF57829 1 54 7.32E-22 T 12-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 BEN31_08785 9707bc03c96138a32584e9dcab083dc9 57 Pfam PF01783 Ribosomal L32p protein family 2 55 1.7E-26 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08785 9707bc03c96138a32584e9dcab083dc9 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 3.7E-27 T 12-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15295 f20556ad8d20812538bf722ecf1e8ce8 77 Pfam PF01381 Helix-turn-helix 10 64 7.0E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_15295 f20556ad8d20812538bf722ecf1e8ce8 77 SUPERFAMILY SSF47413 4 67 3.58E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_15295 f20556ad8d20812538bf722ecf1e8ce8 77 SMART SM00530 9 64 1.7E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_15295 f20556ad8d20812538bf722ecf1e8ce8 77 Gene3D G3DSA:1.10.260.40 1 66 3.2E-18 T 12-10-2018 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 SUPERFAMILY SSF46609 70 153 1.83E-31 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 159 260 1.8E-33 T 12-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 SUPERFAMILY SSF54719 151 265 3.93E-39 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 Gene3D G3DSA:1.10.287.990 89 152 2.4E-24 T 12-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 Gene3D G3DSA:2.40.500.20 153 271 6.7E-42 T 12-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 72 152 2.2E-28 T 12-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 PRINTS PR01703 Manganese superoxide dismutase signature 75 86 1.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 PRINTS PR01703 Manganese superoxide dismutase signature 135 148 1.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 PRINTS PR01703 Manganese superoxide dismutase signature 188 196 1.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 PRINTS PR01703 Manganese superoxide dismutase signature 226 238 1.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 PRINTS PR01703 Manganese superoxide dismutase signature 96 109 1.8E-21 T 12-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_06615 10a68757e65fe8f69a9271f40e1e7229 273 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 228 235 - T 12-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 BEN31_11840 2f0423c5a4a2fda0f9731c7eb6ea854a 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 6.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_11840 2f0423c5a4a2fda0f9731c7eb6ea854a 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 6.3E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_11840 2f0423c5a4a2fda0f9731c7eb6ea854a 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 47 7.0E-13 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_11840 2f0423c5a4a2fda0f9731c7eb6ea854a 192 SUPERFAMILY SSF48498 75 168 1.3E-10 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_11840 2f0423c5a4a2fda0f9731c7eb6ea854a 192 SUPERFAMILY SSF46689 3 77 1.08E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_11840 2f0423c5a4a2fda0f9731c7eb6ea854a 192 Gene3D G3DSA:1.10.357.10 1 190 6.6E-53 T 12-10-2018 BEN31_01880 7afdc816f272e8252fb5b3ac72b3ff8a 205 Gene3D G3DSA:3.30.420.10 2 201 5.4E-39 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_01880 7afdc816f272e8252fb5b3ac72b3ff8a 205 Pfam PF00929 Exonuclease 7 173 2.6E-22 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_01880 7afdc816f272e8252fb5b3ac72b3ff8a 205 SMART SM00479 5 182 5.6E-31 T 12-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III BEN31_01880 7afdc816f272e8252fb5b3ac72b3ff8a 205 SUPERFAMILY SSF53098 6 176 2.39E-29 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_17700 b44edc3bee05f0cb71c319a5138f58ba 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 12-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_17700 b44edc3bee05f0cb71c319a5138f58ba 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 8.5E-29 T 12-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17700 b44edc3bee05f0cb71c319a5138f58ba 89 Gene3D G3DSA:4.10.830.10 28 89 2.9E-26 T 12-10-2018 BEN31_17700 b44edc3bee05f0cb71c319a5138f58ba 89 SUPERFAMILY SSF57716 2 89 4.63E-33 T 12-10-2018 BEN31_17700 b44edc3bee05f0cb71c319a5138f58ba 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.493 T 12-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid BEN31_07140 dfadce3cc8b6c4602ac36dfb81bba0f1 418 Gene3D G3DSA:3.40.190.10 48 356 1.6E-121 T 12-10-2018 BEN31_07140 dfadce3cc8b6c4602ac36dfb81bba0f1 418 Pfam PF01547 Bacterial extracellular solute-binding protein 46 336 3.2E-31 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BEN31_07140 dfadce3cc8b6c4602ac36dfb81bba0f1 418 Gene3D G3DSA:3.40.190.10 141 397 1.6E-121 T 12-10-2018 BEN31_07140 dfadce3cc8b6c4602ac36dfb81bba0f1 418 SUPERFAMILY SSF53850 19 417 3.9E-70 T 12-10-2018 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 PRINTS PR00990 Ribokinase signature 33 52 4.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 PRINTS PR00990 Ribokinase signature 172 187 4.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 PRINTS PR00990 Ribokinase signature 104 117 4.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 PRINTS PR00990 Ribokinase signature 6 27 4.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 PRINTS PR00990 Ribokinase signature 207 218 4.6E-34 T 12-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 Gene3D G3DSA:3.40.1190.20 1 292 2.8E-91 T 12-10-2018 IPR029056 Ribokinase-like BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 289 2.3E-102 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 Hamap MF_01987 Ribokinase [rbsK]. 2 291 24.575 T 12-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 SUPERFAMILY SSF53613 1 290 5.61E-77 T 12-10-2018 IPR029056 Ribokinase-like BEN31_17925 bd0b3b944cd3d6f77f43f50f225170c2 292 Pfam PF00294 pfkB family carbohydrate kinase 1 284 9.8E-72 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BEN31_13440 3d947f280b9add71c22f708d5a4df3e5 340 Pfam PF01594 AI-2E family transporter 16 334 1.0E-52 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BEN31_12400 3b97d6ca9a3c19925f78ef650dfc81c7 302 SUPERFAMILY SSF111331 1 295 5.67E-86 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BEN31_12400 3b97d6ca9a3c19925f78ef650dfc81c7 302 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 128 9.2E-38 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BEN31_12400 3b97d6ca9a3c19925f78ef650dfc81c7 302 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 295 1.6E-121 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase BEN31_12400 3b97d6ca9a3c19925f78ef650dfc81c7 302 SMART SM00046 3 131 2.3E-5 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BEN31_12400 3b97d6ca9a3c19925f78ef650dfc81c7 302 Gene3D G3DSA:2.60.200.40 126 279 3.8E-91 T 12-10-2018 BEN31_12400 3b97d6ca9a3c19925f78ef650dfc81c7 302 Gene3D G3DSA:3.40.50.10330 6 125 3.8E-91 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 247 7.3E-56 T 12-10-2018 BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 SUPERFAMILY SSF51735 10 249 3.5E-70 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 4.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 4.5E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09830 f6cb16bfb38d988cf8a8ec97b1215b5f 261 Gene3D G3DSA:3.40.50.720 5 259 4.2E-68 T 12-10-2018 BEN31_08595 82bb523f46a02dfd2f71dbee8c267e23 258 Pfam PF01479 S4 domain 183 227 7.3E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_08595 82bb523f46a02dfd2f71dbee8c267e23 258 SMART SM00363 182 239 1.3E-11 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_08595 82bb523f46a02dfd2f71dbee8c267e23 258 SUPERFAMILY SSF55174 36 252 4.19E-29 T 12-10-2018 BEN31_08595 82bb523f46a02dfd2f71dbee8c267e23 258 Gene3D G3DSA:3.30.1370.160 3 80 2.5E-30 T 12-10-2018 BEN31_08595 82bb523f46a02dfd2f71dbee8c267e23 258 Gene3D G3DSA:3.10.290.10 181 233 2.0E-8 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_08595 82bb523f46a02dfd2f71dbee8c267e23 258 Gene3D G3DSA:3.30.70.330 81 165 1.6E-25 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 Pfam PF02829 3H domain 81 177 4.5E-32 T 12-10-2018 IPR004173 3H domain GO:0036094 BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 SUPERFAMILY SSF75500 77 179 2.22E-33 T 12-10-2018 IPR035922 3H domain superfamily BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 Pfam PF08279 HTH domain 12 64 7.8E-14 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 Gene3D G3DSA:3.30.1340.20 74 180 2.3E-33 T 12-10-2018 IPR035922 3H domain superfamily BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 PIRSF PIRSF037847 7 180 3.4E-66 T 12-10-2018 IPR026043 Transcription repressor NadR BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 85 178 7.0E-32 T 12-10-2018 IPR004173 3H domain GO:0036094 BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 SUPERFAMILY SSF46785 9 67 6.07E-9 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03850 ff213c00b53bc31732fb1d5f5b09c063 180 Gene3D G3DSA:1.10.10.10 1 67 7.0E-16 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Gene3D G3DSA:1.10.268.10 370 459 2.5E-219 T 12-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 SUPERFAMILY SSF56719 31 488 6.8E-183 T 12-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 3.1E-161 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Gene3D G3DSA:2.120.10.90 497 809 1.2E-124 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 809 0.0 T 12-10-2018 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 810 24.974 T 12-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 SUPERFAMILY SSF101904 500 818 1.83E-110 T 12-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 SMART SM00434 12 465 1.3E-292 T 12-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Gene3D G3DSA:3.90.199.10 33 486 2.5E-219 T 12-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 5.0E-9 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 710 756 1.0E-11 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 762 808 2.6E-10 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 705 5.8E-14 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 656 9.5E-7 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 550 4.5E-14 T 12-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 BEN31_15740 aff0f931ccdbfe04dbf212374d536145 834 Gene3D G3DSA:3.30.1360.40 237 333 2.5E-219 T 12-10-2018 BEN31_15985 322bfdb4407a72ed05279ec2cd525fd3 393 Gene3D G3DSA:3.60.120.10 4 393 5.1E-136 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_15985 322bfdb4407a72ed05279ec2cd525fd3 393 Pfam PF00425 chorismate binding enzyme 121 380 8.5E-78 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BEN31_15985 322bfdb4407a72ed05279ec2cd525fd3 393 SUPERFAMILY SSF56322 53 389 4.58E-91 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_15985 322bfdb4407a72ed05279ec2cd525fd3 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 116 387 1.2E-86 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BEN31_04765 7aa6f42998c90a23ee133c0c588e6f07 305 Gene3D G3DSA:3.30.420.40 1 105 1.9E-21 T 12-10-2018 BEN31_04765 7aa6f42998c90a23ee133c0c588e6f07 305 SUPERFAMILY SSF53067 3 293 8.34E-52 T 12-10-2018 BEN31_04765 7aa6f42998c90a23ee133c0c588e6f07 305 Gene3D G3DSA:3.30.420.40 106 296 1.7E-48 T 12-10-2018 BEN31_04765 7aa6f42998c90a23ee133c0c588e6f07 305 Pfam PF00480 ROK family 7 288 1.4E-48 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_07490 61c546c9b6b224b27ea67ae0cc96f46c 738 SUPERFAMILY SSF56300 142 374 4.49E-26 T 12-10-2018 BEN31_07490 61c546c9b6b224b27ea67ae0cc96f46c 738 Gene3D G3DSA:3.40.50.300 1 165 1.0E-26 T 12-10-2018 BEN31_07490 61c546c9b6b224b27ea67ae0cc96f46c 738 Gene3D G3DSA:3.60.21.10 166 398 1.6E-28 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_07490 61c546c9b6b224b27ea67ae0cc96f46c 738 Pfam PF09511 RNA ligase 453 665 2.5E-44 T 12-10-2018 IPR019039 RNA ligase T4 Rnl1, N-terminal BEN31_07490 61c546c9b6b224b27ea67ae0cc96f46c 738 Pfam PF13671 AAA domain 4 140 9.0E-11 T 12-10-2018 BEN31_07490 61c546c9b6b224b27ea67ae0cc96f46c 738 SUPERFAMILY SSF52540 1 142 1.15E-10 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07490 61c546c9b6b224b27ea67ae0cc96f46c 738 Pfam PF00149 Calcineurin-like phosphoesterase 175 363 1.7E-15 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_18375 55bdff80617133c2fc26b39d9b29cdf4 109 PIRSF PIRSF000025 1 109 3.2E-34 T 12-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 BEN31_18375 55bdff80617133c2fc26b39d9b29cdf4 109 Gene3D G3DSA:1.10.760.10 40 109 3.6E-27 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN31_18375 55bdff80617133c2fc26b39d9b29cdf4 109 SUPERFAMILY SSF46626 8 107 2.01E-18 T 12-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 BEN31_18375 55bdff80617133c2fc26b39d9b29cdf4 109 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 38 105 1.5E-14 T 12-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_18555 02f4e89603cd59f8217fc2cb84ed31ce 213 Pfam PF13460 NAD(P)H-binding 7 197 2.1E-24 T 12-10-2018 IPR016040 NAD(P)-binding domain BEN31_18555 02f4e89603cd59f8217fc2cb84ed31ce 213 Gene3D G3DSA:3.40.50.720 1 211 5.1E-52 T 12-10-2018 BEN31_18555 02f4e89603cd59f8217fc2cb84ed31ce 213 SUPERFAMILY SSF51735 1 210 4.39E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12595 a095ed16f8560ff4c3dadb8650b9aa26 552 Pfam PF07905 Purine catabolism regulatory protein-like family 7 126 4.3E-28 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain BEN31_12595 a095ed16f8560ff4c3dadb8650b9aa26 552 Gene3D G3DSA:1.10.10.2840 411 543 5.0E-22 T 12-10-2018 BEN31_12595 a095ed16f8560ff4c3dadb8650b9aa26 552 Pfam PF13556 PucR C-terminal helix-turn-helix domain 480 537 9.2E-21 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_00640 1336e2cf60456fc9f99f59925d118046 210 Pfam PF01914 MarC family integral membrane protein 3 205 9.7E-70 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BEN31_00640 1336e2cf60456fc9f99f59925d118046 210 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 201 1.1E-74 T 12-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 BEN31_02085 2fb5a25b6692bd95c23340b06875154b 68 Pfam PF17356 Phage-like element PBSX protein XtrA 3 67 2.7E-24 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BEN31_02085 2fb5a25b6692bd95c23340b06875154b 68 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 11 62 3.0E-13 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BEN31_08625 65f61d1e7b8b888972e7752c4f84753a 258 SMART SM00382 27 220 8.7E-10 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_08625 65f61d1e7b8b888972e7752c4f84753a 258 Gene3D G3DSA:3.40.50.300 1 252 1.1E-56 T 12-10-2018 BEN31_08625 65f61d1e7b8b888972e7752c4f84753a 258 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_08625 65f61d1e7b8b888972e7752c4f84753a 258 Pfam PF00005 ABC transporter 18 169 8.6E-26 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_08625 65f61d1e7b8b888972e7752c4f84753a 258 SUPERFAMILY SSF52540 3 233 1.42E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 Gene3D G3DSA:1.20.58.1950 229 281 1.7E-23 T 12-10-2018 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 Pfam PF03123 CAT RNA binding domain 7 61 1.9E-21 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 Gene3D G3DSA:1.10.1790.10 72 172 8.9E-32 T 12-10-2018 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 SUPERFAMILY SSF50151 7 58 1.96E-15 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 SUPERFAMILY SSF63520 60 173 1.44E-28 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 SUPERFAMILY SSF63520 182 279 1.7E-22 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 Gene3D G3DSA:2.30.24.10 1 71 5.0E-25 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 Pfam PF00874 PRD domain 81 170 5.4E-23 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 Pfam PF00874 PRD domain 188 278 5.7E-18 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 Gene3D G3DSA:1.20.890.100 173 227 1.4E-21 T 12-10-2018 BEN31_09375 c7826c42b698b9674bfb8528fd8175bc 284 SMART SM01061 6 64 2.0E-24 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 SUPERFAMILY SSF103473 6 461 1.66E-65 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 6.6E-9 T 12-10-2018 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 6.6E-9 T 12-10-2018 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 6.6E-9 T 12-10-2018 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 6.6E-9 T 12-10-2018 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 Pfam PF07690 Major Facilitator Superfamily 18 408 1.1E-53 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 Gene3D G3DSA:1.20.1720.10 14 248 2.4E-45 T 12-10-2018 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 Gene3D G3DSA:1.20.1250.20 261 472 1.6E-26 T 12-10-2018 BEN31_13755 0a1fed98beb01d92db46fa29768f1a73 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 417 5.9E-109 T 12-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 PRINTS PR00175 Sodium/alanine symporter signature 296 314 1.0E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 PRINTS PR00175 Sodium/alanine symporter signature 341 363 1.0E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 PRINTS PR00175 Sodium/alanine symporter signature 205 224 1.0E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 PRINTS PR00175 Sodium/alanine symporter signature 177 195 1.0E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 PRINTS PR00175 Sodium/alanine symporter signature 401 421 1.0E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.0E-56 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 Pfam PF01235 Sodium:alanine symporter family 48 444 1.1E-158 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14290 ecfa6a0fe49f929b554462c3e93e72b0 471 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 432 1.5E-152 T 12-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 BEN31_14875 4ad829373d6b42f329144bea7d04e0d4 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 5.1E-66 T 12-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14875 4ad829373d6b42f329144bea7d04e0d4 145 PIRSF PIRSF002181 1 143 1.3E-50 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BEN31_14875 4ad829373d6b42f329144bea7d04e0d4 145 Pfam PF00572 Ribosomal protein L13 15 139 1.2E-57 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BEN31_14875 4ad829373d6b42f329144bea7d04e0d4 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 12-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 BEN31_14875 4ad829373d6b42f329144bea7d04e0d4 145 Gene3D G3DSA:3.90.1180.10 1 143 1.0E-61 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_14875 4ad829373d6b42f329144bea7d04e0d4 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.599 T 12-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 BEN31_14875 4ad829373d6b42f329144bea7d04e0d4 145 SUPERFAMILY SSF52161 6 143 5.1E-60 T 12-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_06510 79442a2ac34dd582c5235f3d704144cb 232 SUPERFAMILY SSF53335 12 196 1.05E-39 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_06510 79442a2ac34dd582c5235f3d704144cb 232 Pfam PF08241 Methyltransferase domain 40 133 9.7E-20 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BEN31_06510 79442a2ac34dd582c5235f3d704144cb 232 Gene3D G3DSA:3.40.50.150 4 232 1.2E-42 T 12-10-2018 BEN31_16930 80d48038dbafa524e042ac5dc7c7c7e7 361 Gene3D G3DSA:1.25.40.10 3 361 5.0E-79 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_16930 80d48038dbafa524e042ac5dc7c7c7e7 361 SUPERFAMILY SSF48452 124 267 4.93E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_16930 80d48038dbafa524e042ac5dc7c7c7e7 361 Pfam PF13374 Tetratricopeptide repeat 173 203 0.0013 T 12-10-2018 BEN31_09810 cb835f7925d004637efc5f9a66dc6c5b 318 SUPERFAMILY SSF54593 1 303 8.55E-55 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_09810 cb835f7925d004637efc5f9a66dc6c5b 318 Gene3D G3DSA:3.10.180.10 65 219 4.5E-118 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_09810 cb835f7925d004637efc5f9a66dc6c5b 318 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 123 7.7E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_09810 cb835f7925d004637efc5f9a66dc6c5b 318 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 275 5.8E-21 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_09810 cb835f7925d004637efc5f9a66dc6c5b 318 Gene3D G3DSA:3.10.180.10 4 314 4.5E-118 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_11050 b82d63170369f17483348d66a115ac2a 452 Pfam PF14398 YheC/D like ATP-grasp 186 438 4.2E-74 T 12-10-2018 IPR026838 Endospore coat-associated protein YheC/D BEN31_11050 b82d63170369f17483348d66a115ac2a 452 SUPERFAMILY SSF56059 235 418 5.3E-8 T 12-10-2018 BEN31_06330 4770db41e96f865a987361e3507772ca 205 Pfam PF14005 YpjP-like protein 71 202 9.0E-61 T 12-10-2018 IPR025616 YpjP-like protein BEN31_13180 286f019e1379354d793584a8a0e156ca 158 SMART SM01058 6 116 3.9E-29 T 12-10-2018 IPR003711 CarD-like/TRCF domain BEN31_13180 286f019e1379354d793584a8a0e156ca 158 Gene3D G3DSA:2.30.30.840 2 67 9.9E-26 T 12-10-2018 BEN31_13180 286f019e1379354d793584a8a0e156ca 158 Pfam PF02559 CarD-like/TRCF domain 7 115 4.6E-18 T 12-10-2018 IPR003711 CarD-like/TRCF domain BEN31_13180 286f019e1379354d793584a8a0e156ca 158 SUPERFAMILY SSF141259 6 63 1.23E-12 T 12-10-2018 IPR036101 CarD-like/TRCF domain superfamily BEN31_13180 286f019e1379354d793584a8a0e156ca 158 Gene3D G3DSA:1.20.58.1290 68 158 1.8E-25 T 12-10-2018 BEN31_06170 2bcdfad8bf0a7896917c2b7357173552 415 Pfam PF13482 RNase_H superfamily 109 277 1.3E-38 T 12-10-2018 IPR038720 YprB, ribonuclease H-like domain BEN31_06170 2bcdfad8bf0a7896917c2b7357173552 415 SUPERFAMILY SSF53098 108 279 1.24E-27 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_06170 2bcdfad8bf0a7896917c2b7357173552 415 SUPERFAMILY SSF48452 292 356 1.17E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_06170 2bcdfad8bf0a7896917c2b7357173552 415 Gene3D G3DSA:1.25.40.10 288 411 5.9E-5 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_12425 6f2616d20a223eee09d5cdc8579d0e2a 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 96.715 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_12425 6f2616d20a223eee09d5cdc8579d0e2a 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 3.3E-208 T 12-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_12425 6f2616d20a223eee09d5cdc8579d0e2a 485 SUPERFAMILY SSF75304 1 483 2.22E-169 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_12425 6f2616d20a223eee09d5cdc8579d0e2a 485 Pfam PF01425 Amidase 24 465 2.4E-162 T 12-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_12425 6f2616d20a223eee09d5cdc8579d0e2a 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 12-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 BEN31_12425 6f2616d20a223eee09d5cdc8579d0e2a 485 Gene3D G3DSA:3.90.1300.10 2 485 2.6E-202 T 12-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 Gene3D G3DSA:2.30.33.40 1 93 2.9E-38 T 12-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 2.9E-36 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 SMART SM00883 1 93 3.1E-57 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 PRINTS PR00297 10kDa chaperonin signature 59 71 1.6E-32 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 PRINTS PR00297 10kDa chaperonin signature 2 17 1.6E-32 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 PRINTS PR00297 10kDa chaperonin signature 80 93 1.6E-32 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 PRINTS PR00297 10kDa chaperonin signature 24 45 1.6E-32 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 SUPERFAMILY SSF50129 1 93 8.95E-35 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 27.18 T 12-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 BEN31_12880 fd7cab16b5d5ed74b7c5ea86f62c83f7 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 12-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 BEN31_12200 c338aec0a413bf3bbf6a7a795bb2014b 241 SUPERFAMILY SSF142695 65 209 7.32E-41 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN31_12200 c338aec0a413bf3bbf6a7a795bb2014b 241 Gene3D G3DSA:3.40.50.10990 52 213 2.4E-48 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN31_12200 c338aec0a413bf3bbf6a7a795bb2014b 241 Pfam PF00925 GTP cyclohydrolase II 64 206 1.2E-41 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN31_01905 169622e9ee3a7cbf7e8b8d12e4e933a3 86 SUPERFAMILY SSF116922 4 82 2.88E-27 T 12-10-2018 IPR023162 Apc36109-like domain superfamily BEN31_01905 169622e9ee3a7cbf7e8b8d12e4e933a3 86 Gene3D G3DSA:1.10.340.20 1 86 3.1E-30 T 12-10-2018 IPR023162 Apc36109-like domain superfamily BEN31_01905 169622e9ee3a7cbf7e8b8d12e4e933a3 86 ProDom PD062625 YUGE 9 85 1.0E-21 T 12-10-2018 IPR015053 Protein of unknown function DUF1871 BEN31_01905 169622e9ee3a7cbf7e8b8d12e4e933a3 86 Pfam PF08958 Domain of unknown function (DUF1871) 9 85 3.0E-38 T 12-10-2018 IPR015053 Protein of unknown function DUF1871 BEN31_06835 d4b2ef801ec400d98e11b6e11aba7387 400 SUPERFAMILY SSF103473 8 390 1.06E-57 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_06835 d4b2ef801ec400d98e11b6e11aba7387 400 Gene3D G3DSA:1.20.1250.20 4 390 6.9E-91 T 12-10-2018 BEN31_06835 d4b2ef801ec400d98e11b6e11aba7387 400 Pfam PF07690 Major Facilitator Superfamily 19 350 8.8E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 Pfam PF00990 Diguanylate cyclase, GGDEF domain 360 514 1.1E-38 T 12-10-2018 IPR000160 GGDEF domain BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 Gene3D G3DSA:3.30.450.20 237 356 1.4E-13 T 12-10-2018 BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 Gene3D G3DSA:3.30.70.270 357 521 2.9E-50 T 12-10-2018 BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 Pfam PF16927 N-terminal 7TM region of histidine kinase 12 235 1.1E-50 T 12-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 SUPERFAMILY SSF55073 365 516 4.0E-43 T 12-10-2018 IPR029787 Nucleotide cyclase BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 356 517 3.7E-45 T 12-10-2018 IPR000160 GGDEF domain BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 SMART SM00267 349 518 8.0E-55 T 12-10-2018 IPR000160 GGDEF domain BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 Pfam PF13188 PAS domain 239 268 1.9E-4 T 12-10-2018 IPR000014 PAS domain BEN31_00985 90c6a2917b18dd953c4c9e46af28430a 536 SUPERFAMILY SSF55785 247 358 8.9E-8 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 SUPERFAMILY SSF52499 1 217 7.2E-61 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 Pfam PF00550 Phosphopantetheine attachment site 223 280 5.8E-7 T 12-10-2018 IPR009081 Phosphopantetheine binding ACP domain BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 PRINTS PR01398 Isochorismatase signature 63 80 4.5E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 PRINTS PR01398 Isochorismatase signature 112 134 4.5E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 PRINTS PR01398 Isochorismatase signature 168 186 4.5E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 PRINTS PR01398 Isochorismatase signature 186 203 4.5E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 PRINTS PR01398 Isochorismatase signature 80 99 4.5E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 PRINTS PR01398 Isochorismatase signature 2 14 4.5E-47 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 PIRSF PIRSF001111 1 295 3.9E-131 T 12-10-2018 IPR016291 Isochorismatase GO:0008908 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 SUPERFAMILY SSF47336 217 288 4.06E-9 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 Pfam PF00857 Isochorismatase family 32 205 1.5E-36 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 Gene3D G3DSA:3.40.50.850 1 211 1.2E-75 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_15975 2bb11f892b1f8698d07e0b9161b7a73d 301 Gene3D G3DSA:1.10.1200.10 219 290 5.3E-23 T 12-10-2018 IPR036736 ACP-like superfamily BEN31_05495 dca4e37f045f416acc38fd31423798dd 185 SUPERFAMILY SSF55811 7 178 8.12E-50 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN31_05495 dca4e37f045f416acc38fd31423798dd 185 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN31_05495 dca4e37f045f416acc38fd31423798dd 185 Gene3D G3DSA:3.90.79.10 3 184 2.5E-55 T 12-10-2018 BEN31_05495 dca4e37f045f416acc38fd31423798dd 185 Pfam PF00293 NUDIX domain 42 158 4.8E-20 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN31_04440 e376864e50250496e8855e6734075aeb 246 SUPERFAMILY SSF88713 24 235 2.13E-61 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_04440 e376864e50250496e8855e6734075aeb 246 Pfam PF01522 Polysaccharide deacetylase 43 163 5.5E-29 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_04440 e376864e50250496e8855e6734075aeb 246 Gene3D G3DSA:3.20.20.370 29 242 1.3E-69 T 12-10-2018 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 SUPERFAMILY SSF52540 40 304 2.13E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 Gene3D G3DSA:1.10.8.60 226 316 4.4E-20 T 12-10-2018 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 SMART SM00382 90 224 8.5E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 Gene3D G3DSA:3.40.50.300 26 225 4.6E-58 T 12-10-2018 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 50 311 5.8E-138 T 12-10-2018 IPR014232 Sporulation stage V, protein K BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 145 164 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 175 187 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 213 232 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 196 213 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 131 145 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 53 67 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 93 108 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 PRINTS PR00819 CbxX/CfqX superfamily signature 273 285 2.5E-62 T 12-10-2018 IPR000641 CbxX/CfqX GO:0005524 BEN31_07625 330389c34bae7e8692a358adbe3de42c 319 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 94 225 1.3E-19 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 101 1.5E-34 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 119 206 7.7E-19 T 12-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 101 4.0E-21 T 12-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 202 4.4E-33 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 SUPERFAMILY SSF141734 5 105 4.18E-47 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 29.747 T 12-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 Gene3D G3DSA:3.10.20.400 1 93 4.0E-41 T 12-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 116 202 21.158 T 12-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 207 38.909 T 12-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 Gene3D G3DSA:1.10.287.1080 116 208 8.8E-35 T 12-10-2018 BEN31_18600 868d8eebd2ef757eab1895b01922b893 209 SUPERFAMILY SSF101386 118 206 5.79E-28 T 12-10-2018 BEN31_11640 1b9f8f5e67c6a514cadbe2e2e35cd38e 54 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 6 54 3.1E-16 T 12-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 BEN31_11640 1b9f8f5e67c6a514cadbe2e2e35cd38e 54 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 7 54 3.7E-14 T 12-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 BEN31_13800 178e0ae68d473f7a4139bd3b4fe3b3fa 441 SUPERFAMILY SSF51679 5 435 9.81E-138 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_13800 178e0ae68d473f7a4139bd3b4fe3b3fa 441 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 10 429 4.1E-183 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BEN31_13800 178e0ae68d473f7a4139bd3b4fe3b3fa 441 PIRSF PIRSF000337 3 441 3.5E-164 T 12-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 BEN31_13800 178e0ae68d473f7a4139bd3b4fe3b3fa 441 Gene3D G3DSA:3.20.20.30 1 441 1.7E-164 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_13800 178e0ae68d473f7a4139bd3b4fe3b3fa 441 Pfam PF00296 Luciferase-like monooxygenase 19 381 3.1E-70 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BEN31_17440 b744031fd34b8ab369594decc85513a5 703 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN31_17440 b744031fd34b8ab369594decc85513a5 703 Pfam PF02754 Cysteine-rich domain 581 668 1.3E-17 T 12-10-2018 IPR004017 Cysteine-rich domain BEN31_17440 b744031fd34b8ab369594decc85513a5 703 Pfam PF02754 Cysteine-rich domain 458 537 2.9E-6 T 12-10-2018 IPR004017 Cysteine-rich domain BEN31_17440 b744031fd34b8ab369594decc85513a5 703 SUPERFAMILY SSF103501 7 238 1.44E-16 T 12-10-2018 IPR036197 NarG-like superfamily BEN31_17440 b744031fd34b8ab369594decc85513a5 703 SUPERFAMILY SSF46548 253 399 2.27E-20 T 12-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 BEN31_17440 b744031fd34b8ab369594decc85513a5 703 Pfam PF13183 4Fe-4S dicluster domain 274 383 1.8E-12 T 12-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain BEN31_02120 8b984857d3b2300ad17591b11a903a97 127 Pfam PF11436 Protein of unknown function (DUF3199) 2 125 2.0E-58 T 12-10-2018 IPR013514 Protein of unknown function DUF3199, YqbG BEN31_02120 8b984857d3b2300ad17591b11a903a97 127 SUPERFAMILY SSF116915 1 126 1.31E-53 T 12-10-2018 IPR036558 YqbG-like superfamily BEN31_02120 8b984857d3b2300ad17591b11a903a97 127 Gene3D G3DSA:1.10.3230.10 1 127 1.7E-49 T 12-10-2018 IPR036558 YqbG-like superfamily BEN31_04305 abae17b100884db6efab3f71814d5155 366 SMART SM00345 8 67 1.0E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_04305 abae17b100884db6efab3f71814d5155 366 Gene3D G3DSA:3.40.50.2300 187 353 4.7E-77 T 12-10-2018 BEN31_04305 abae17b100884db6efab3f71814d5155 366 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 6.0E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_04305 abae17b100884db6efab3f71814d5155 366 Gene3D G3DSA:1.10.10.10 1 74 8.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04305 abae17b100884db6efab3f71814d5155 366 Gene3D G3DSA:3.40.50.2300 84 350 4.7E-77 T 12-10-2018 BEN31_04305 abae17b100884db6efab3f71814d5155 366 Pfam PF13377 Periplasmic binding protein-like domain 196 357 1.0E-27 T 12-10-2018 BEN31_04305 abae17b100884db6efab3f71814d5155 366 SUPERFAMILY SSF46785 3 71 9.48E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_04305 abae17b100884db6efab3f71814d5155 366 SUPERFAMILY SSF53822 82 360 7.66E-59 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_04305 abae17b100884db6efab3f71814d5155 366 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 8.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_04305 abae17b100884db6efab3f71814d5155 366 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 8.9E-8 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_05345 0ea4a2db344c280e13f623c926aef2db 110 Gene3D G3DSA:1.20.58.280 6 110 4.9E-35 T 12-10-2018 BEN31_05345 0ea4a2db344c280e13f623c926aef2db 110 PIRSF PIRSF000699 5 110 2.8E-35 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BEN31_05345 0ea4a2db344c280e13f623c926aef2db 110 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 13 105 3.2E-32 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BEN31_05345 0ea4a2db344c280e13f623c926aef2db 110 SUPERFAMILY SSF46973 11 106 3.4E-32 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BEN31_09675 dd269b26338c4847d886fb99a809a640 142 Gene3D G3DSA:3.30.300.20 47 139 2.9E-32 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_09675 dd269b26338c4847d886fb99a809a640 142 Pfam PF02566 OsmC-like protein 44 137 1.2E-18 T 12-10-2018 IPR003718 OsmC/Ohr family BEN31_09675 dd269b26338c4847d886fb99a809a640 142 Gene3D G3DSA:2.20.25.10 3 45 3.4E-12 T 12-10-2018 BEN31_09675 dd269b26338c4847d886fb99a809a640 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 137 9.5E-49 T 12-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 BEN31_09675 dd269b26338c4847d886fb99a809a640 142 SUPERFAMILY SSF82784 5 137 1.44E-34 T 12-10-2018 IPR036102 OsmC/Ohr superfamily BEN31_04460 293b6169f022ba18b9d4d6f8003b3d8f 366 Pfam PF01926 50S ribosome-binding GTPase 162 226 1.2E-13 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_04460 293b6169f022ba18b9d4d6f8003b3d8f 366 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 366 1.2E-159 T 12-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH BEN31_04460 293b6169f022ba18b9d4d6f8003b3d8f 366 SUPERFAMILY SSF52540 61 278 4.97E-32 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04460 293b6169f022ba18b9d4d6f8003b3d8f 366 Gene3D G3DSA:3.40.50.300 56 224 3.7E-51 T 12-10-2018 BEN31_10200 3dc38df11fa1b8a12fc55b351f4b5e7f 370 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 349 6.8E-101 T 12-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 BEN31_10200 3dc38df11fa1b8a12fc55b351f4b5e7f 370 SUPERFAMILY SSF51905 4 365 1.94E-45 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10200 3dc38df11fa1b8a12fc55b351f4b5e7f 370 Gene3D G3DSA:3.30.9.10 93 306 2.0E-113 T 12-10-2018 BEN31_10200 3dc38df11fa1b8a12fc55b351f4b5e7f 370 SUPERFAMILY SSF54373 220 306 9.03E-19 T 12-10-2018 BEN31_10200 3dc38df11fa1b8a12fc55b351f4b5e7f 370 Gene3D G3DSA:3.50.50.60 8 347 2.0E-113 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10200 3dc38df11fa1b8a12fc55b351f4b5e7f 370 Pfam PF01266 FAD dependent oxidoreductase 6 345 1.3E-63 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BEN31_16100 ee6149e4cc832361c427f31356a182f6 163 Pfam PF00583 Acetyltransferase (GNAT) family 52 152 3.2E-16 T 12-10-2018 IPR000182 GNAT domain BEN31_16100 ee6149e4cc832361c427f31356a182f6 163 SUPERFAMILY SSF55729 11 158 4.97E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_16100 ee6149e4cc832361c427f31356a182f6 163 Gene3D G3DSA:3.40.630.30 10 163 1.1E-41 T 12-10-2018 BEN31_06355 b5a6876e082089013bcefd62b4f2f170 212 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 6 206 1.8E-69 T 12-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 BEN31_06355 b5a6876e082089013bcefd62b4f2f170 212 Pfam PF03006 Haemolysin-III related 2 197 2.6E-39 T 12-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 BEN31_16045 34ef86caa65d5a2e55fd96f4ce43ae3a 174 Pfam PF00578 AhpC/TSA family 7 139 1.3E-25 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_16045 34ef86caa65d5a2e55fd96f4ce43ae3a 174 Gene3D G3DSA:3.40.30.10 4 168 7.9E-36 T 12-10-2018 BEN31_16045 34ef86caa65d5a2e55fd96f4ce43ae3a 174 SUPERFAMILY SSF52833 2 162 2.78E-38 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_16045 34ef86caa65d5a2e55fd96f4ce43ae3a 174 PIRSF PIRSF000239 1 169 1.6E-17 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_18450 289d1396f324d71fc0bf73b2ba6c7dc2 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 2.5E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_18450 289d1396f324d71fc0bf73b2ba6c7dc2 190 Gene3D G3DSA:1.10.357.10 3 189 1.4E-19 T 12-10-2018 BEN31_18450 289d1396f324d71fc0bf73b2ba6c7dc2 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_18450 289d1396f324d71fc0bf73b2ba6c7dc2 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.3E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_18450 289d1396f324d71fc0bf73b2ba6c7dc2 190 SUPERFAMILY SSF46689 5 58 1.23E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 4.0E-35 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 SUPERFAMILY SSF50249 7 84 5.14E-31 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 12-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 6.2E-35 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 Pfam PF00366 Ribosomal protein S17 12 79 7.8E-32 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 3.1E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 3.1E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 3.1E-11 T 12-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 24.101 T 12-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15000 ee0564990414ffe2d39b335c5f67a79c 87 Gene3D G3DSA:2.40.50.140 6 86 1.0E-34 T 12-10-2018 BEN31_15675 589a4488b2260f50cd66252972c52e14 276 SMART SM00283 90 272 3.6E-12 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_15675 589a4488b2260f50cd66252972c52e14 276 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 147 267 9.4E-32 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_15675 589a4488b2260f50cd66252972c52e14 276 SUPERFAMILY SSF58104 109 272 3.14E-45 T 12-10-2018 BEN31_15675 589a4488b2260f50cd66252972c52e14 276 Gene3D G3DSA:1.10.287.950 102 276 6.2E-44 T 12-10-2018 BEN31_14820 9197f3aca113fffda6f93abb1ddf887a 200 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 194 2.1E-74 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 BEN31_14820 9197f3aca113fffda6f93abb1ddf887a 200 PIRSF PIRSF029886 1 198 9.9E-85 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 BEN31_14820 9197f3aca113fffda6f93abb1ddf887a 200 SMART SM01251 17 195 2.5E-115 T 12-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 BEN31_05075 c8a649dee9e895cdcffce469dfbec941 94 ProDom PD064940 YQHV TRANSMEMBRANE MEMBRANE BH2798 13 77 3.0E-10 T 12-10-2018 IPR020390 Uncharacterised protein family YqhV BEN31_05075 c8a649dee9e895cdcffce469dfbec941 94 Pfam PF10942 Protein of unknown function (DUF2619) 20 88 1.4E-26 T 12-10-2018 IPR020390 Uncharacterised protein family YqhV BEN31_03165 4dac593a19c698c5a18fd1c3b2b202f3 227 SMART SM00849 7 193 8.6E-8 T 12-10-2018 IPR001279 Metallo-beta-lactamase BEN31_03165 4dac593a19c698c5a18fd1c3b2b202f3 227 SUPERFAMILY SSF56281 1 221 2.23E-29 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_03165 4dac593a19c698c5a18fd1c3b2b202f3 227 Pfam PF13483 Beta-lactamase superfamily domain 4 193 1.3E-24 T 12-10-2018 BEN31_03165 4dac593a19c698c5a18fd1c3b2b202f3 227 Gene3D G3DSA:3.60.15.10 1 227 9.7E-70 T 12-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like BEN31_03165 4dac593a19c698c5a18fd1c3b2b202f3 227 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 227 36.163 T 12-10-2018 IPR022877 Protein of unknown funcion UPF0173 BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 SUPERFAMILY SSF51735 4 249 1.74E-79 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.3E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.3E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.3E-6 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.5E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.5E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.5E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.5E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.5E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.5E-35 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 9.2E-58 T 12-10-2018 BEN31_09265 f9f09b0827b70a1af9e46b77b4c658b9 254 Gene3D G3DSA:3.40.50.720 1 253 2.0E-79 T 12-10-2018 BEN31_06585 51c924305465bb41588fbe17c3763b2e 192 SUPERFAMILY SSF49329 42 186 8.51E-42 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN31_06585 51c924305465bb41588fbe17c3763b2e 192 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 175 186 - T 12-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN31_06585 51c924305465bb41588fbe17c3763b2e 192 Gene3D G3DSA:2.60.40.200 41 191 1.9E-57 T 12-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN31_06585 51c924305465bb41588fbe17c3763b2e 192 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 50 186 1.0E-39 T 12-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 457 2.8E-74 T 12-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 SUPERFAMILY SSF55103 220 458 2.78E-68 T 12-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 Gene3D G3DSA:1.10.45.10 418 458 4.7E-11 T 12-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 Gene3D G3DSA:3.30.70.2740 336 417 2.0E-15 T 12-10-2018 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 8.6E-176 T 12-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 Gene3D G3DSA:3.30.465.40 2 237 1.5E-79 T 12-10-2018 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 SUPERFAMILY SSF56176 4 217 1.73E-73 T 12-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 BEN31_06955 a4f5662d33be4cb6e825e5b514925f13 469 Pfam PF01565 FAD binding domain 41 179 1.9E-41 T 12-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 BEN31_08845 f9e168a3a78fc0cc9c3bde12adf65c36 137 Pfam PF14071 Putative coat protein 11 137 6.6E-44 T 12-10-2018 IPR025953 Putative coat protein YlbD BEN31_06420 abe4f8c5a31c571bcf25b834c6cb384c 143 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 127 37.804 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BEN31_06420 abe4f8c5a31c571bcf25b834c6cb384c 143 SUPERFAMILY SSF51316 3 142 2.14E-60 T 12-10-2018 IPR011057 Mss4-like superfamily BEN31_06420 abe4f8c5a31c571bcf25b834c6cb384c 143 Pfam PF01641 SelR domain 10 126 9.6E-49 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BEN31_06420 abe4f8c5a31c571bcf25b834c6cb384c 143 Gene3D G3DSA:2.170.150.20 1 143 1.0E-60 T 12-10-2018 BEN31_06420 abe4f8c5a31c571bcf25b834c6cb384c 143 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 135 2.1E-65 T 12-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 BEN31_02755 132cc2cd29ecf4fc02fbd3e3cc987883 60 Pfam PF10957 Sporulation protein Cse60 2 60 9.5E-36 T 12-10-2018 IPR020296 Sporulation protein Cse60 BEN31_02755 132cc2cd29ecf4fc02fbd3e3cc987883 60 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 1.0E-19 T 12-10-2018 IPR020296 Sporulation protein Cse60 BEN31_05425 dfb9215cf126ab854b68273546d6a2af 411 PRINTS PR01035 Tetracycline resistance protein signature 79 103 2.9E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_05425 dfb9215cf126ab854b68273546d6a2af 411 PRINTS PR01035 Tetracycline resistance protein signature 137 159 2.9E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_05425 dfb9215cf126ab854b68273546d6a2af 411 PRINTS PR01035 Tetracycline resistance protein signature 165 185 2.9E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_05425 dfb9215cf126ab854b68273546d6a2af 411 Pfam PF07690 Major Facilitator Superfamily 15 344 5.1E-38 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_05425 dfb9215cf126ab854b68273546d6a2af 411 SUPERFAMILY SSF103473 1 398 1.96E-57 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_05425 dfb9215cf126ab854b68273546d6a2af 411 Gene3D G3DSA:1.20.1250.20 10 385 1.6E-51 T 12-10-2018 BEN31_05425 dfb9215cf126ab854b68273546d6a2af 411 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_07560 f7434dc6e33d636836755f316ea36733 370 Gene3D G3DSA:1.25.40.10 1 369 3.2E-75 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_07560 f7434dc6e33d636836755f316ea36733 370 SMART SM00028 215 248 4.5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_07560 f7434dc6e33d636836755f316ea36733 370 SMART SM00028 175 208 49.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_07560 f7434dc6e33d636836755f316ea36733 370 SUPERFAMILY SSF48452 101 250 5.31E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_07560 f7434dc6e33d636836755f316ea36733 370 Pfam PF13424 Tetratricopeptide repeat 174 244 6.3E-8 T 12-10-2018 BEN31_14710 f44a268b735c4de5e2c619a5290d5ce7 208 Gene3D G3DSA:1.10.10.1320 8 95 8.3E-7 T 12-10-2018 BEN31_14710 f44a268b735c4de5e2c619a5290d5ce7 208 Pfam PF13490 Putative zinc-finger 3 38 1.1E-8 T 12-10-2018 IPR027383 Putative zinc-finger BEN31_12995 e956f5955655db94c43288049040de69 291 SUPERFAMILY SSF103481 41 140 3.27E-13 T 12-10-2018 BEN31_12995 e956f5955655db94c43288049040de69 291 SUPERFAMILY SSF103481 186 289 3.4E-17 T 12-10-2018 BEN31_12995 e956f5955655db94c43288049040de69 291 Pfam PF00892 EamA-like transporter family 6 139 4.2E-22 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_12995 e956f5955655db94c43288049040de69 291 Pfam PF00892 EamA-like transporter family 151 287 2.1E-26 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_16270 a39c80fd9a6e3712cae7a816ff1c9afd 68 Gene3D G3DSA:1.10.260.40 1 65 1.6E-21 T 12-10-2018 BEN31_16270 a39c80fd9a6e3712cae7a816ff1c9afd 68 SMART SM00530 4 59 2.3E-11 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_16270 a39c80fd9a6e3712cae7a816ff1c9afd 68 Pfam PF01381 Helix-turn-helix 5 57 1.9E-12 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_16270 a39c80fd9a6e3712cae7a816ff1c9afd 68 SUPERFAMILY SSF47413 2 64 3.75E-16 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_08825 2e11d004a684f96eafb76419bf4db95f 90 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 6.4E-32 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 BEN31_08825 2e11d004a684f96eafb76419bf4db95f 90 Hamap MF_01126 UPF0298 protein . 1 78 22.168 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 BEN31_08825 2e11d004a684f96eafb76419bf4db95f 90 PIRSF PIRSF031653 1 90 2.1E-34 T 12-10-2018 IPR016979 Protein of unknown function DUF2129 BEN31_01430 f06ae85ed178b06c7707586a44736a66 317 Gene3D G3DSA:3.40.50.1980 32 141 4.5E-34 T 12-10-2018 BEN31_01430 f06ae85ed178b06c7707586a44736a66 317 Pfam PF01497 Periplasmic binding protein 55 289 9.7E-27 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_01430 f06ae85ed178b06c7707586a44736a66 317 SUPERFAMILY SSF53807 37 311 4.91E-61 T 12-10-2018 BEN31_01430 f06ae85ed178b06c7707586a44736a66 317 Gene3D G3DSA:3.40.50.1980 142 317 1.0E-60 T 12-10-2018 BEN31_05810 636ed328efaec7539dc795281558787e 449 Pfam PF14620 YpeB sporulation 13 372 4.5E-132 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 BEN31_05810 636ed328efaec7539dc795281558787e 449 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 439 3.0E-153 T 12-10-2018 IPR014239 Spore germination YpeB GO:0009847 BEN31_05810 636ed328efaec7539dc795281558787e 449 Pfam PF03413 Peptidase propeptide and YPEB domain 376 433 1.3E-4 T 12-10-2018 IPR025711 PepSY domain BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 Pfam PF00557 Metallopeptidase family M24 136 337 2.8E-67 T 12-10-2018 IPR000994 Peptidase M24 BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 12-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 127 2.6E-30 T 12-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 Gene3D G3DSA:3.90.230.10 128 353 5.2E-88 T 12-10-2018 BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 SUPERFAMILY SSF55920 80 348 4.19E-86 T 12-10-2018 IPR036005 Creatinase/aminopeptidase-like BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 2.0E-6 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 2.0E-6 T 12-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 BEN31_05065 d9875804f01d57c2f0064018a0b6da2b 353 Gene3D G3DSA:3.40.350.10 1 127 2.2E-37 T 12-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal BEN31_12450 f3d12d36bb927fb824a797b32a09267c 335 Gene3D G3DSA:3.30.200.20 1 100 4.7E-6 T 12-10-2018 BEN31_12450 f3d12d36bb927fb824a797b32a09267c 335 Gene3D G3DSA:3.90.1200.10 114 309 3.9E-23 T 12-10-2018 BEN31_12450 f3d12d36bb927fb824a797b32a09267c 335 SUPERFAMILY SSF56112 16 307 1.43E-54 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_12450 f3d12d36bb927fb824a797b32a09267c 335 Pfam PF01636 Phosphotransferase enzyme family 29 239 2.1E-28 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BEN31_18455 3769b1bb89d9ca33dcfedd38ccc477b4 843 Gene3D G3DSA:3.50.30.10 732 840 8.9E-33 T 12-10-2018 BEN31_18455 3769b1bb89d9ca33dcfedd38ccc477b4 843 Pfam PF00391 PEP-utilising enzyme, mobile domain 761 832 1.0E-21 T 12-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 BEN31_18455 3769b1bb89d9ca33dcfedd38ccc477b4 843 SUPERFAMILY SSF52009 732 835 5.36E-27 T 12-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 BEN31_18455 3769b1bb89d9ca33dcfedd38ccc477b4 843 SUPERFAMILY SSF56059 11 298 2.71E-70 T 12-10-2018 BEN31_18455 3769b1bb89d9ca33dcfedd38ccc477b4 843 Gene3D G3DSA:3.30.1490.20 4 163 2.7E-39 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_18455 3769b1bb89d9ca33dcfedd38ccc477b4 843 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 15 301 3.9E-78 T 12-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 BEN31_18455 3769b1bb89d9ca33dcfedd38ccc477b4 843 Gene3D G3DSA:3.30.470.20 165 312 8.0E-40 T 12-10-2018 BEN31_06235 cd0ecdeee59691dbb669c96eb0b90bca 87 Pfam PF10752 Protein of unknown function (DUF2533) 2 84 5.4E-40 T 12-10-2018 IPR019688 Protein of unknown function DUF2533 BEN31_11160 20bd3c3d20034674fbc5ce39009c4861 352 Pfam PF13800 Sigma factor regulator N-terminal 56 150 5.8E-21 T 12-10-2018 IPR029101 Sigma factor regulator, N-terminal BEN31_11160 20bd3c3d20034674fbc5ce39009c4861 352 Pfam PF13791 Sigma factor regulator C-terminal 202 345 2.3E-37 T 12-10-2018 IPR025672 Sigma factor regulator C-terminal domain BEN31_08030 77e1d50e08d79b59fcb781899dd5e24f 264 Pfam PF01148 Cytidylyltransferase family 2 262 8.2E-71 T 12-10-2018 BEN31_08030 77e1d50e08d79b59fcb781899dd5e24f 264 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 220 246 - T 12-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 BEN31_13335 1c25aceb928ccd067e6410ec75c2b76a 122 SUPERFAMILY SSF52091 6 116 1.28E-20 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13335 1c25aceb928ccd067e6410ec75c2b76a 122 Gene3D G3DSA:3.30.750.24 4 120 3.0E-33 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13335 1c25aceb928ccd067e6410ec75c2b76a 122 Pfam PF01740 STAS domain 13 101 1.3E-12 T 12-10-2018 IPR002645 STAS domain BEN31_15490 9c2f15badd68c6b4f50b30be02854c9b 294 Pfam PF05582 YabG peptidase U57 4 286 7.3E-118 T 12-10-2018 IPR008764 Peptidase U57, YabG BEN31_15490 9c2f15badd68c6b4f50b30be02854c9b 294 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 287 2.2E-140 T 12-10-2018 IPR008764 Peptidase U57, YabG BEN31_15490 9c2f15badd68c6b4f50b30be02854c9b 294 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 4 283 2.0E-128 T 12-10-2018 IPR008764 Peptidase U57, YabG BEN31_15490 9c2f15badd68c6b4f50b30be02854c9b 294 PIRSF PIRSF011575 2 291 3.0E-131 T 12-10-2018 IPR008764 Peptidase U57, YabG BEN31_14060 4b464be21952ed6dfccf864cf928d37f 273 Pfam PF02540 NAD synthase 23 264 4.7E-77 T 12-10-2018 IPR022310 NAD/GMP synthase BEN31_14060 4b464be21952ed6dfccf864cf928d37f 273 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 273 6.4E-83 T 12-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 BEN31_14060 4b464be21952ed6dfccf864cf928d37f 273 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 267 49.326 T 12-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 BEN31_14060 4b464be21952ed6dfccf864cf928d37f 273 SUPERFAMILY SSF52402 3 272 9.86E-82 T 12-10-2018 BEN31_14060 4b464be21952ed6dfccf864cf928d37f 273 Gene3D G3DSA:3.40.50.620 1 273 9.3E-83 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_04270 71bce43a9a04af487487d0ac94790ed8 114 Pfam PF14176 YxiJ-like protein 14 111 3.7E-32 T 12-10-2018 IPR025551 Immunity protein WapI-like BEN31_12195 38373cd9eb8ada7b19b77afd8086e0cc 267 Pfam PF03781 Sulfatase-modifying factor enzyme 1 39 256 7.1E-40 T 12-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 BEN31_12195 38373cd9eb8ada7b19b77afd8086e0cc 267 SUPERFAMILY SSF56436 3 256 2.35E-56 T 12-10-2018 IPR016187 C-type lectin fold BEN31_12195 38373cd9eb8ada7b19b77afd8086e0cc 267 Gene3D G3DSA:3.90.1580.10 2 266 1.2E-48 T 12-10-2018 BEN31_01360 1c550e82d24a1016777f9a6fbe694044 222 Gene3D G3DSA:1.10.3720.10 8 222 7.8E-50 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_01360 1c550e82d24a1016777f9a6fbe694044 222 SUPERFAMILY SSF161098 13 209 4.71E-47 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_01360 1c550e82d24a1016777f9a6fbe694044 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 222 1.3E-21 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_02660 3d679ec08cfae0cb2ba538cb85f6ae09 436 Pfam PF02687 FtsX-like permease family 324 427 1.3E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN31_02660 3d679ec08cfae0cb2ba538cb85f6ae09 436 Pfam PF12704 MacB-like periplasmic core domain 22 234 4.0E-8 T 12-10-2018 IPR025857 MacB-like periplasmic core domain BEN31_05545 4fa8764f79abf3634728d1eb2c923b48 270 Pfam PF01048 Phosphorylase superfamily 22 266 7.4E-59 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BEN31_05545 4fa8764f79abf3634728d1eb2c923b48 270 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 22 266 1.0E-117 T 12-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BEN31_05545 4fa8764f79abf3634728d1eb2c923b48 270 SUPERFAMILY SSF53167 4 269 7.33E-96 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BEN31_05545 4fa8764f79abf3634728d1eb2c923b48 270 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 22 267 5.9E-107 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BEN31_05545 4fa8764f79abf3634728d1eb2c923b48 270 PIRSF PIRSF000477 2 269 4.5E-115 T 12-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 BEN31_05545 4fa8764f79abf3634728d1eb2c923b48 270 Gene3D G3DSA:3.40.50.1580 1 269 2.3E-114 T 12-10-2018 BEN31_13840 c2cfb368325bbfa98cc049ac2499b1b4 230 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 110 165 9.0E-4 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BEN31_13840 c2cfb368325bbfa98cc049ac2499b1b4 230 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 208 1.1E-18 T 12-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_13840 c2cfb368325bbfa98cc049ac2499b1b4 230 Gene3D G3DSA:3.90.470.20 107 209 5.1E-73 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_13840 c2cfb368325bbfa98cc049ac2499b1b4 230 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 104 229 3.4E-34 T 12-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 BEN31_13840 c2cfb368325bbfa98cc049ac2499b1b4 230 Gene3D G3DSA:3.90.470.20 18 222 5.1E-73 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_13840 c2cfb368325bbfa98cc049ac2499b1b4 230 SUPERFAMILY SSF56214 7 99 3.14E-22 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_13840 c2cfb368325bbfa98cc049ac2499b1b4 230 SUPERFAMILY SSF56214 106 227 1.18E-31 T 12-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 BEN31_13910 eb84fe216e84d6fe64eb2501bf15f326 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 256 6.0E-15 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_13910 eb84fe216e84d6fe64eb2501bf15f326 267 Gene3D G3DSA:1.10.3720.10 9 266 5.6E-57 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_13910 eb84fe216e84d6fe64eb2501bf15f326 267 SUPERFAMILY SSF161098 8 260 1.12E-57 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 SUPERFAMILY SSF63520 193 285 3.53E-11 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 SUPERFAMILY SSF52794 402 481 2.2E-8 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Gene3D G3DSA:1.10.10.10 3 69 4.5E-8 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Gene3D G3DSA:3.40.50.2300 403 491 1.1E-9 T 12-10-2018 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 637 5.9E-27 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Gene3D G3DSA:3.40.930.10 498 638 2.4E-25 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Gene3D G3DSA:1.10.1790.10 189 286 1.2E-9 T 12-10-2018 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 SUPERFAMILY SSF55804 499 638 4.32E-31 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Pfam PF00874 PRD domain 306 391 2.0E-15 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Pfam PF00874 PRD domain 209 283 1.1E-9 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Gene3D G3DSA:1.10.1790.10 298 394 5.6E-15 T 12-10-2018 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Pfam PF05043 Mga helix-turn-helix domain 95 170 1.9E-11 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 SUPERFAMILY SSF63520 295 392 2.22E-16 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_14435 3be7518442b5d91c083d95a28867e8c3 639 Pfam PF08279 HTH domain 8 65 4.5E-7 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 65 502 75.004 T 12-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 SMART SM00729 210 428 2.2E-63 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 Pfam PF04055 Radical SAM superfamily 214 385 4.1E-35 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 66 498 4.2E-166 T 12-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 66 501 2.5E-216 T 12-10-2018 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 Pfam PF00919 Uncharacterized protein family UPF0004 66 167 9.5E-30 T 12-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 Gene3D G3DSA:3.40.50.12160 65 199 3.5E-35 T 12-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 214 234 - T 12-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 Pfam PF01938 TRAM domain 440 501 1.9E-16 T 12-10-2018 IPR002792 TRAM domain BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 Gene3D G3DSA:3.80.30.20 209 442 3.1E-91 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN31_07765 2806f6720ac6fa7fe553fa6afd4af836 508 SUPERFAMILY SSF102114 198 433 3.14E-63 T 12-10-2018 BEN31_11150 cbbae24f2f7c04bdc1ce327356c48bd5 200 Pfam PF01553 Acyltransferase 19 142 2.4E-21 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN31_11150 cbbae24f2f7c04bdc1ce327356c48bd5 200 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 19 141 2.0E-33 T 12-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 BEN31_11150 cbbae24f2f7c04bdc1ce327356c48bd5 200 SUPERFAMILY SSF69593 2 192 2.09E-33 T 12-10-2018 BEN31_11150 cbbae24f2f7c04bdc1ce327356c48bd5 200 SMART SM00563 33 144 6.9E-27 T 12-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 BEN31_10325 452688ff4064d0dadbd7cf10b0908b73 545 SUPERFAMILY SSF53850 35 537 8.69E-136 T 12-10-2018 BEN31_10325 452688ff4064d0dadbd7cf10b0908b73 545 Gene3D G3DSA:3.90.76.10 72 193 2.6E-172 T 12-10-2018 BEN31_10325 452688ff4064d0dadbd7cf10b0908b73 545 Gene3D G3DSA:3.10.105.10 299 517 2.6E-172 T 12-10-2018 BEN31_10325 452688ff4064d0dadbd7cf10b0908b73 545 PIRSF PIRSF002741 1 544 1.2E-143 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BEN31_10325 452688ff4064d0dadbd7cf10b0908b73 545 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 466 3.0E-86 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BEN31_10325 452688ff4064d0dadbd7cf10b0908b73 545 Gene3D G3DSA:3.40.190.10 52 530 2.6E-172 T 12-10-2018 BEN31_08730 f772c8816871bc1f85092b55f0e9760f 324 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 48 60 2.6E-5 T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08730 f772c8816871bc1f85092b55f0e9760f 324 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08730 f772c8816871bc1f85092b55f0e9760f 324 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08730 f772c8816871bc1f85092b55f0e9760f 324 Pfam PF00953 Glycosyl transferase family 4 82 248 3.0E-39 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BEN31_08730 f772c8816871bc1f85092b55f0e9760f 324 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 323 9.7E-132 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08730 f772c8816871bc1f85092b55f0e9760f 324 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 24.968 T 12-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_16710 408bd811fc370f134e6a84743137c606 64 SUPERFAMILY SSF51658 2 51 1.76E-6 T 12-10-2018 IPR036237 Xylose isomerase-like superfamily BEN31_16710 408bd811fc370f134e6a84743137c606 64 Gene3D G3DSA:3.20.20.150 1 64 4.2E-14 T 12-10-2018 BEN31_16710 408bd811fc370f134e6a84743137c606 64 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 53 1.5E-16 T 12-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 BEN31_18535 c571e13144e67e2c2895e0eafed38bce 314 Pfam PF07670 Nucleoside recognition 17 100 9.4E-9 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN31_18535 c571e13144e67e2c2895e0eafed38bce 314 Pfam PF07670 Nucleoside recognition 177 264 2.3E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN31_01245 ce21f6acf146f4ac40bbea8c564d767b 364 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 362 3.7E-83 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_01245 ce21f6acf146f4ac40bbea8c564d767b 364 Pfam PF03845 Spore germination protein 8 324 5.0E-82 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_01245 ce21f6acf146f4ac40bbea8c564d767b 364 PIRSF PIRSF006060 295 364 0.7 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_01245 ce21f6acf146f4ac40bbea8c564d767b 364 PIRSF PIRSF006060 1 301 1.4E-10 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 12-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 Pfam PF00875 DNA photolyase 4 165 3.1E-29 T 12-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 Gene3D G3DSA:3.40.50.620 5 206 1.1E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 Gene3D G3DSA:1.25.40.80 131 286 1.1E-60 T 12-10-2018 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 Gene3D G3DSA:1.10.579.10 291 477 5.3E-81 T 12-10-2018 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 Pfam PF03441 FAD binding domain of DNA photolyase 273 472 2.6E-86 T 12-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 SUPERFAMILY SSF48173 205 476 4.06E-106 T 12-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 SUPERFAMILY SSF52425 3 173 3.79E-32 T 12-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 PRINTS PR00147 DNA photolyase signature 322 338 1.5E-26 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 PRINTS PR00147 DNA photolyase signature 342 360 1.5E-26 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 PRINTS PR00147 DNA photolyase signature 142 158 1.5E-26 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BEN31_08900 0d4f6f940d849c63aa3e15cc6b9b1a7c 477 PRINTS PR00147 DNA photolyase signature 381 395 1.5E-26 T 12-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 BEN31_13015 1cc7f3fb583ce6eca70b4a77bab04455 61 SUPERFAMILY SSF69047 9 58 9.81E-12 T 12-10-2018 IPR036629 YjbJ superfamily BEN31_13015 1cc7f3fb583ce6eca70b4a77bab04455 61 Pfam PF05532 CsbD-like 9 59 1.0E-16 T 12-10-2018 IPR008462 CsbD-like domain BEN31_13015 1cc7f3fb583ce6eca70b4a77bab04455 61 Gene3D G3DSA:1.10.1470.10 7 61 1.7E-10 T 12-10-2018 IPR036629 YjbJ superfamily BEN31_04425 0bd9332642b9c938f4f6be9c5c2b6acc 337 SUPERFAMILY SSF50129 4 152 1.38E-34 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_04425 0bd9332642b9c938f4f6be9c5c2b6acc 337 Gene3D G3DSA:3.90.180.10 19 335 5.2E-78 T 12-10-2018 BEN31_04425 0bd9332642b9c938f4f6be9c5c2b6acc 337 SMART SM00829 12 335 1.7E-13 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_04425 0bd9332642b9c938f4f6be9c5c2b6acc 337 Pfam PF13602 Zinc-binding dehydrogenase 191 335 2.7E-18 T 12-10-2018 BEN31_04425 0bd9332642b9c938f4f6be9c5c2b6acc 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 92 1.8E-9 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_04425 0bd9332642b9c938f4f6be9c5c2b6acc 337 Gene3D G3DSA:3.40.50.720 129 305 5.2E-78 T 12-10-2018 BEN31_04425 0bd9332642b9c938f4f6be9c5c2b6acc 337 SUPERFAMILY SSF51735 121 244 1.14E-27 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13735 80960e247e406f60712c01848b738b07 474 SUPERFAMILY SSF53383 93 469 2.04E-67 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_13735 80960e247e406f60712c01848b738b07 474 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 6.2E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13735 80960e247e406f60712c01848b738b07 474 Gene3D G3DSA:1.10.10.10 1 89 6.5E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13735 80960e247e406f60712c01848b738b07 474 Pfam PF00155 Aminotransferase class I and II 118 417 9.6E-22 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_13735 80960e247e406f60712c01848b738b07 474 SMART SM00345 19 78 6.5E-15 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_13735 80960e247e406f60712c01848b738b07 474 SUPERFAMILY SSF46785 12 85 8.99E-18 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13735 80960e247e406f60712c01848b738b07 474 Gene3D G3DSA:3.40.640.10 94 466 1.2E-121 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10965 ab261a336856a041d33779571e729f3e 29 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 3 28 3.0E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BEN31_10965 ab261a336856a041d33779571e729f3e 29 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 6 28 3.7E-11 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BEN31_17345 9359cd2694e94cb3103561823c2a25ce 433 Gene3D G3DSA:1.20.1250.30 235 412 6.5E-166 T 12-10-2018 BEN31_17345 9359cd2694e94cb3103561823c2a25ce 433 Pfam PF01966 HD domain 61 181 1.6E-17 T 12-10-2018 IPR006674 HD domain BEN31_17345 9359cd2694e94cb3103561823c2a25ce 433 Gene3D G3DSA:1.10.3210.10 11 401 6.5E-166 T 12-10-2018 BEN31_17345 9359cd2694e94cb3103561823c2a25ce 433 SUPERFAMILY SSF109604 6 413 7.12E-120 T 12-10-2018 BEN31_17345 9359cd2694e94cb3103561823c2a25ce 433 SMART SM00471 57 187 1.5E-13 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_07985 4f6c2554a151d0a6842f024096446745 157 SUPERFAMILY SSF74942 85 156 1.06E-20 T 12-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily BEN31_07985 4f6c2554a151d0a6842f024096446745 157 Pfam PF02576 RimP N-terminal domain 12 84 1.1E-30 T 12-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal BEN31_07985 4f6c2554a151d0a6842f024096446745 157 Gene3D G3DSA:3.30.300.70 1 81 4.0E-30 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily BEN31_07985 4f6c2554a151d0a6842f024096446745 157 Pfam PF17384 RimP C-terminal SH3 domain 87 156 6.7E-21 T 12-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal BEN31_07985 4f6c2554a151d0a6842f024096446745 157 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 156 25.115 T 12-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 BEN31_07985 4f6c2554a151d0a6842f024096446745 157 SUPERFAMILY SSF75420 3 84 2.22E-27 T 12-10-2018 IPR035956 RimP, N-terminal domain superfamily BEN31_07985 4f6c2554a151d0a6842f024096446745 157 Gene3D G3DSA:2.30.30.180 88 154 1.3E-25 T 12-10-2018 BEN31_11795 eab22597ac29f787ed9455a0324d9661 159 Pfam PF01047 MarR family 48 104 1.3E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_11795 eab22597ac29f787ed9455a0324d9661 159 Gene3D G3DSA:1.10.10.10 15 155 3.7E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11795 eab22597ac29f787ed9455a0324d9661 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 3.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_11795 eab22597ac29f787ed9455a0324d9661 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 3.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_11795 eab22597ac29f787ed9455a0324d9661 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 3.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_11795 eab22597ac29f787ed9455a0324d9661 159 SUPERFAMILY SSF46785 41 154 4.39E-26 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_11795 eab22597ac29f787ed9455a0324d9661 159 SMART SM00347 40 140 5.0E-34 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_14070 cf382e0d9586f34e4030dd2bd452105c 450 SUPERFAMILY SSF103473 197 444 1.31E-8 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14070 cf382e0d9586f34e4030dd2bd452105c 450 PIRSF PIRSF006060 9 445 4.7E-42 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_14070 cf382e0d9586f34e4030dd2bd452105c 450 Pfam PF00324 Amino acid permease 24 388 1.1E-43 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_14070 cf382e0d9586f34e4030dd2bd452105c 450 Gene3D G3DSA:1.20.1740.10 13 450 6.3E-46 T 12-10-2018 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 SUPERFAMILY SSF56024 48 224 4.71E-30 T 12-10-2018 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 SMART SM00155 368 395 0.0017 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 SMART SM00155 151 178 5.2 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 Gene3D G3DSA:3.30.870.10 45 241 1.5E-30 T 12-10-2018 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 Gene3D G3DSA:3.30.870.10 259 460 6.9E-24 T 12-10-2018 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 Pfam PF13091 PLD-like domain 295 421 9.1E-13 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 Pfam PF13091 PLD-like domain 67 215 9.2E-16 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_07060 2f742833e5994c972b0d7308af1d8724 468 SUPERFAMILY SSF56024 274 429 2.55E-21 T 12-10-2018 BEN31_08780 079f3760280be9eec65676a8edb482d7 179 SMART SM00717 5 59 0.0059 T 12-10-2018 IPR001005 SANT/Myb domain BEN31_08780 079f3760280be9eec65676a8edb482d7 179 SUPERFAMILY SSF46689 7 62 2.18E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_08780 079f3760280be9eec65676a8edb482d7 179 Pfam PF13921 Myb-like DNA-binding domain 9 61 1.3E-5 T 12-10-2018 BEN31_08780 079f3760280be9eec65676a8edb482d7 179 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 78 9.8E-44 T 12-10-2018 IPR014243 Transcription factor, RsfA BEN31_08780 079f3760280be9eec65676a8edb482d7 179 Gene3D G3DSA:1.10.10.60 8 81 3.0E-5 T 12-10-2018 BEN31_04520 7b07124330419bedb8ecb0369f61a330 339 Gene3D G3DSA:1.10.8.60 144 213 1.6E-23 T 12-10-2018 BEN31_04520 7b07124330419bedb8ecb0369f61a330 339 SUPERFAMILY SSF52540 3 214 1.13E-23 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04520 7b07124330419bedb8ecb0369f61a330 339 Gene3D G3DSA:1.20.272.10 214 338 1.5E-41 T 12-10-2018 BEN31_04520 7b07124330419bedb8ecb0369f61a330 339 SUPERFAMILY SSF48019 217 336 1.12E-25 T 12-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 BEN31_04520 7b07124330419bedb8ecb0369f61a330 339 Gene3D G3DSA:3.40.50.300 1 143 1.2E-47 T 12-10-2018 BEN31_04520 7b07124330419bedb8ecb0369f61a330 339 Pfam PF06144 DNA polymerase III, delta subunit 18 193 1.1E-49 T 12-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 BEN31_04520 7b07124330419bedb8ecb0369f61a330 339 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 14 336 3.4E-88 T 12-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 BEN31_12815 0917e067322906c3426af955914683a5 124 Pfam PF02627 Carboxymuconolactone decarboxylase family 52 115 8.6E-8 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN31_12815 0917e067322906c3426af955914683a5 124 Gene3D G3DSA:1.20.1290.10 9 123 9.9E-17 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN31_12815 0917e067322906c3426af955914683a5 124 SUPERFAMILY SSF69118 52 120 1.3E-15 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN31_15330 184a9c57f2dca4e60d731c0e411b4d63 307 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 304 4.2E-137 T 12-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BEN31_15330 184a9c57f2dca4e60d731c0e411b4d63 307 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 304 4.1E-146 T 12-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 BEN31_15330 184a9c57f2dca4e60d731c0e411b4d63 307 Gene3D G3DSA:3.40.50.1100 7 300 1.1E-124 T 12-10-2018 BEN31_15330 184a9c57f2dca4e60d731c0e411b4d63 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 292 1.4E-71 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN31_15330 184a9c57f2dca4e60d731c0e411b4d63 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BEN31_15330 184a9c57f2dca4e60d731c0e411b4d63 307 Gene3D G3DSA:3.40.50.1100 46 144 1.1E-124 T 12-10-2018 BEN31_15330 184a9c57f2dca4e60d731c0e411b4d63 307 SUPERFAMILY SSF53686 3 304 1.06E-104 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 Pfam PF13424 Tetratricopeptide repeat 219 277 1.1E-7 T 12-10-2018 BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 Gene3D G3DSA:1.25.40.10 2 372 4.1E-102 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 SUPERFAMILY SSF48452 97 204 2.47E-6 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 SUPERFAMILY SSF48452 176 285 5.54E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 SMART SM00028 95 128 230.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 SMART SM00028 255 288 0.017 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 SMART SM00028 216 249 2.7E-4 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18785 ec8ab6dffeb2ba4daacc1cf951d6ab7e 372 SMART SM00028 135 168 220.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_18565 e55af920d0e5d242403d2ec6c2716490 391 Pfam PF13393 Histidyl-tRNA synthetase 9 317 1.4E-77 T 12-10-2018 BEN31_18565 e55af920d0e5d242403d2ec6c2716490 391 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 11 321 4.2E-100 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 BEN31_18565 e55af920d0e5d242403d2ec6c2716490 391 Gene3D G3DSA:3.40.50.12590 325 390 8.2E-18 T 12-10-2018 BEN31_18565 e55af920d0e5d242403d2ec6c2716490 391 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 371 35.455 T 12-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 BEN31_18565 e55af920d0e5d242403d2ec6c2716490 391 SUPERFAMILY SSF55681 5 321 1.56E-63 T 12-10-2018 BEN31_18565 e55af920d0e5d242403d2ec6c2716490 391 PIRSF PIRSF001549 1 384 3.1E-82 T 12-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 BEN31_18565 e55af920d0e5d242403d2ec6c2716490 391 Gene3D G3DSA:3.30.930.10 1 322 1.8E-103 T 12-10-2018 BEN31_03360 1e6f89bebd518c99a3530262aac6b304 226 Pfam PF04172 LrgB-like family 10 223 4.1E-70 T 12-10-2018 IPR007300 CidB/LrgB family BEN31_03360 1e6f89bebd518c99a3530262aac6b304 226 Hamap MF_01142 Antiholin-like protein LrgB [lrgB]. 1 226 31.11 T 12-10-2018 IPR024891 Antiholin-like protein LrgB BEN31_18550 18f7d8cae5f042d49d945d1d78de5149 142 Gene3D G3DSA:1.10.10.10 1 141 2.9E-56 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_18550 18f7d8cae5f042d49d945d1d78de5149 142 SUPERFAMILY SSF46785 2 134 3.07E-34 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_18550 18f7d8cae5f042d49d945d1d78de5149 142 Pfam PF02082 Transcriptional regulator 1 81 7.4E-24 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_16910 0ddea1f4fbca34022d41c11ff36a851e 372 Gene3D G3DSA:3.40.50.2300 158 329 2.0E-75 T 12-10-2018 BEN31_16910 0ddea1f4fbca34022d41c11ff36a851e 372 Pfam PF13407 Periplasmic binding protein domain 63 315 1.2E-33 T 12-10-2018 IPR025997 Periplasmic binding protein BEN31_16910 0ddea1f4fbca34022d41c11ff36a851e 372 Gene3D G3DSA:3.40.50.2300 56 323 2.0E-75 T 12-10-2018 BEN31_16910 0ddea1f4fbca34022d41c11ff36a851e 372 SUPERFAMILY SSF53822 53 334 6.75E-52 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_15550 955efbcdd23ee513097bff848cb47455 329 Pfam PF13177 DNA polymerase III, delta subunit 12 169 6.4E-56 T 12-10-2018 BEN31_15550 955efbcdd23ee513097bff848cb47455 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 240 326 2.3E-6 T 12-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_15550 955efbcdd23ee513097bff848cb47455 329 SUPERFAMILY SSF52540 11 198 5.67E-41 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15550 955efbcdd23ee513097bff848cb47455 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 19 197 1.3E-63 T 12-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BEN31_15550 955efbcdd23ee513097bff848cb47455 329 Gene3D G3DSA:3.40.50.300 8 169 4.4E-51 T 12-10-2018 BEN31_00480 0004309210968301d207ca528f44cd88 367 Pfam PF14897 EpsG family 36 362 1.0E-50 T 12-10-2018 BEN31_16010 89331e46b60e0110400bb8571effa765 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 4.1E-35 T 12-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 BEN31_16010 89331e46b60e0110400bb8571effa765 454 SUPERFAMILY SSF48024 8 119 1.44E-37 T 12-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 BEN31_16010 89331e46b60e0110400bb8571effa765 454 Gene3D G3DSA:3.40.50.300 167 454 7.8E-122 T 12-10-2018 BEN31_16010 89331e46b60e0110400bb8571effa765 454 SMART SM00382 202 391 0.0039 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16010 89331e46b60e0110400bb8571effa765 454 Gene3D G3DSA:1.10.860.10 1 166 3.8E-65 T 12-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal BEN31_16010 89331e46b60e0110400bb8571effa765 454 SUPERFAMILY SSF52540 183 433 1.24E-55 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16010 89331e46b60e0110400bb8571effa765 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 9.3E-120 T 12-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 BEN31_16010 89331e46b60e0110400bb8571effa765 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 442 9.3E-189 T 12-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 PRINTS PR00773 GrpE protein signature 137 152 1.8E-31 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 PRINTS PR00773 GrpE protein signature 164 183 1.8E-31 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 PRINTS PR00773 GrpE protein signature 83 98 1.8E-31 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 PRINTS PR00773 GrpE protein signature 55 71 1.8E-31 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 ProSitePatterns PS01071 grpE protein signature. 140 183 - T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 Gene3D G3DSA:2.30.22.10 129 185 4.5E-26 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 Gene3D G3DSA:3.90.20.20 2 128 1.4E-26 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 Pfam PF01025 GrpE 23 185 2.1E-53 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 SUPERFAMILY SSF58014 34 129 2.35E-27 T 12-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 Hamap MF_01151 Protein GrpE [grpE]. 3 185 21.654 T 12-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 BEN31_04560 a26ff2d1229a4eb684de4603229df65d 185 SUPERFAMILY SSF51064 130 185 1.31E-19 T 12-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 BEN31_10245 9768ea5496ba5dda18fdc2961cb34a3c 192 Gene3D G3DSA:2.40.320.10 1 189 6.1E-52 T 12-10-2018 BEN31_10245 9768ea5496ba5dda18fdc2961cb34a3c 192 Pfam PF01928 CYTH domain 4 183 1.9E-28 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BEN31_10245 9768ea5496ba5dda18fdc2961cb34a3c 192 PIRSF PIRSF012526 1 190 1.8E-66 T 12-10-2018 IPR009195 Uncharacterised protein family YjbK BEN31_10245 9768ea5496ba5dda18fdc2961cb34a3c 192 SMART SM01118 4 189 9.7E-22 T 12-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 BEN31_10245 9768ea5496ba5dda18fdc2961cb34a3c 192 SUPERFAMILY SSF55154 5 186 2.62E-29 T 12-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 BEN31_11210 f22becbcbffb94b2115f1a598dcf24f0 294 Pfam PF13527 Acetyltransferase (GNAT) domain 33 130 5.7E-14 T 12-10-2018 BEN31_11210 f22becbcbffb94b2115f1a598dcf24f0 294 SUPERFAMILY SSF55729 18 255 1.6E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_11210 f22becbcbffb94b2115f1a598dcf24f0 294 Gene3D G3DSA:3.40.630.30 1 174 1.4E-29 T 12-10-2018 BEN31_07755 5bc6034b047d5ba64786b22c717c0c8d 181 Pfam PF10628 Outer spore coat protein E (CotE) 3 176 3.8E-68 T 12-10-2018 IPR018901 Spore coat protein CotE BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 SUPERFAMILY SSF53067 81 378 2.14E-56 T 12-10-2018 BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 SUPERFAMILY SSF46785 8 74 1.16E-17 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 ProSitePatterns PS01125 ROK family signature. 213 240 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 Pfam PF00480 ROK family 83 376 2.0E-85 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 Gene3D G3DSA:3.30.420.40 204 358 6.4E-89 T 12-10-2018 BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 Gene3D G3DSA:1.10.10.10 10 76 1.5E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 Gene3D G3DSA:3.30.420.40 82 376 6.4E-89 T 12-10-2018 BEN31_06755 6b8cc0b5b81c697b9a3dbfb1d5eec31e 386 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 56 1.2E-6 T 12-10-2018 BEN31_17035 bc0f7e1c4ebf9182b44c722bfeb60566 330 Gene3D G3DSA:3.90.25.10 173 306 1.7E-129 T 12-10-2018 BEN31_17035 bc0f7e1c4ebf9182b44c722bfeb60566 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 9.1E-62 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN31_17035 bc0f7e1c4ebf9182b44c722bfeb60566 330 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 326 1.5E-137 T 12-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 BEN31_17035 bc0f7e1c4ebf9182b44c722bfeb60566 330 SUPERFAMILY SSF51735 1 328 4.67E-100 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17035 bc0f7e1c4ebf9182b44c722bfeb60566 330 Gene3D G3DSA:3.40.50.720 3 252 1.7E-129 T 12-10-2018 BEN31_18160 5ba73b5324d2f87abb15a70f33d0deac 307 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 9 306 47.656 T 12-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU BEN31_18160 5ba73b5324d2f87abb15a70f33d0deac 307 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 83 224 3.1E-49 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_18160 5ba73b5324d2f87abb15a70f33d0deac 307 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 82 225 3.2E-54 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_18160 5ba73b5324d2f87abb15a70f33d0deac 307 Gene3D G3DSA:1.10.260.150 47 307 1.7E-90 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 9.8E-13 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 9.8E-13 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 9.8E-13 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 Pfam PF00117 Glutamine amidotransferase class-I 4 185 9.9E-56 T 12-10-2018 IPR017926 Glutamine amidotransferase BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.4E-34 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.4E-34 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.4E-34 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.4E-34 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.4E-34 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.4E-34 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.6E-7 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.6E-7 T 12-10-2018 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 Gene3D G3DSA:3.40.50.880 1 190 5.4E-62 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 1.0E-90 T 12-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_15320 dae6ceaaefcb628cf70f15a0b54bcb10 197 SUPERFAMILY SSF52317 1 190 1.34E-55 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_03695 0c44d476ddfdbb2e5c8ff75729988181 195 Gene3D G3DSA:3.40.50.300 1 194 2.1E-54 T 12-10-2018 BEN31_03695 0c44d476ddfdbb2e5c8ff75729988181 195 SUPERFAMILY SSF52540 16 191 2.9E-37 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03695 0c44d476ddfdbb2e5c8ff75729988181 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 189 3.3E-70 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BEN31_03695 0c44d476ddfdbb2e5c8ff75729988181 195 Pfam PF01926 50S ribosome-binding GTPase 25 143 1.4E-20 T 12-10-2018 IPR006073 GTP binding domain GO:0005525 BEN31_03695 0c44d476ddfdbb2e5c8ff75729988181 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 28.76 T 12-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 BEN31_10570 b669944ef75012e2d77afb3b43f075d5 178 SUPERFAMILY SSF51161 49 175 2.63E-24 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_10570 b669944ef75012e2d77afb3b43f075d5 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 154 9.1E-6 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_10570 b669944ef75012e2d77afb3b43f075d5 178 Gene3D G3DSA:2.160.10.10 76 177 2.1E-22 T 12-10-2018 BEN31_07200 9c0d07ab5a0c5dc1dad32f16f6fcce03 219 SUPERFAMILY SSF46689 11 77 8.98E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_07200 9c0d07ab5a0c5dc1dad32f16f6fcce03 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 60 7.6E-7 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07200 9c0d07ab5a0c5dc1dad32f16f6fcce03 219 Gene3D G3DSA:1.10.357.10 1 203 1.3E-31 T 12-10-2018 BEN31_00540 fb3bee8e5556aa40786e49ce8e2329c3 441 Pfam PF01554 MatE 12 172 1.9E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_00540 fb3bee8e5556aa40786e49ce8e2329c3 441 Pfam PF01554 MatE 255 392 7.9E-16 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_00540 fb3bee8e5556aa40786e49ce8e2329c3 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 12 406 3.6E-69 T 12-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 Gene3D G3DSA:3.90.226.10 2 249 1.2E-81 T 12-10-2018 BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 Gene3D G3DSA:3.90.226.10 250 489 1.1E-78 T 12-10-2018 BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 SUPERFAMILY SSF52096 5 244 4.18E-68 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 SUPERFAMILY SSF52096 249 489 8.67E-76 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 Pfam PF01039 Carboxyl transferase domain 29 487 4.2E-153 T 12-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 122 140 6.2E-5 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 88 102 6.2E-5 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_05295 6b6922d8b8aa50e6ea2913ea70e63826 489 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 187 198 6.2E-5 T 12-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03525 61eb5c7fd00248054a179c13a9c3852f 239 Gene3D G3DSA:3.30.930.10 2 185 9.4E-46 T 12-10-2018 BEN31_03525 61eb5c7fd00248054a179c13a9c3852f 239 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 3 233 6.0E-41 T 12-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 BEN31_03525 61eb5c7fd00248054a179c13a9c3852f 239 Pfam PF03099 Biotin/lipoate A/B protein ligase family 9 127 4.8E-12 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN31_03525 61eb5c7fd00248054a179c13a9c3852f 239 SUPERFAMILY SSF55681 2 184 7.81E-44 T 12-10-2018 BEN31_03525 61eb5c7fd00248054a179c13a9c3852f 239 Gene3D G3DSA:2.30.30.100 187 235 1.7E-5 T 12-10-2018 BEN31_10030 d4d84f7cdef05f03106d430bdca9a22a 220 PIRSF PIRSF000440 1 212 4.9E-86 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 BEN31_10030 d4d84f7cdef05f03106d430bdca9a22a 220 Pfam PF00302 Chloramphenicol acetyltransferase 2 203 2.9E-95 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 BEN31_10030 d4d84f7cdef05f03106d430bdca9a22a 220 Gene3D G3DSA:3.30.559.10 3 206 5.7E-66 T 12-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 BEN31_10030 d4d84f7cdef05f03106d430bdca9a22a 220 SUPERFAMILY SSF52777 6 209 2.34E-74 T 12-10-2018 BEN31_10030 d4d84f7cdef05f03106d430bdca9a22a 220 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 11 197 4.0E-101 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 BEN31_10030 d4d84f7cdef05f03106d430bdca9a22a 220 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 184 194 - T 12-10-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 BEN31_10030 d4d84f7cdef05f03106d430bdca9a22a 220 SMART SM01059 1 203 8.0E-112 T 12-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 BEN31_02170 fbf969e82e3a151f8d8af08fcd432b4d 336 SUPERFAMILY SSF69279 19 150 6.23E-8 T 12-10-2018 BEN31_01025 24c0cea289f913607a0203c134293255 310 Gene3D G3DSA:3.40.50.12740 1 166 4.2E-22 T 12-10-2018 BEN31_01025 24c0cea289f913607a0203c134293255 310 Pfam PF08664 YcbB domain 159 299 5.6E-47 T 12-10-2018 IPR013972 YcbB domain BEN31_01025 24c0cea289f913607a0203c134293255 310 Pfam PF00072 Response regulator receiver domain 4 112 4.9E-20 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01025 24c0cea289f913607a0203c134293255 310 SUPERFAMILY SSF52172 2 139 6.26E-23 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_01025 24c0cea289f913607a0203c134293255 310 SMART SM00448 1 114 1.9E-16 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_09275 d51cf9c7cf2d0a64e6cc6500e74fc357 165 Gene3D G3DSA:2.40.440.10 49 165 5.0E-44 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BEN31_09275 d51cf9c7cf2d0a64e6cc6500e74fc357 165 Pfam PF01476 LysM domain 4 47 3.4E-8 T 12-10-2018 IPR018392 LysM domain BEN31_09275 d51cf9c7cf2d0a64e6cc6500e74fc357 165 SUPERFAMILY SSF141523 56 163 1.26E-34 T 12-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like BEN31_09275 d51cf9c7cf2d0a64e6cc6500e74fc357 165 SMART SM00257 3 47 1.2E-7 T 12-10-2018 IPR018392 LysM domain BEN31_09275 d51cf9c7cf2d0a64e6cc6500e74fc357 165 SUPERFAMILY SSF54106 2 47 2.75E-7 T 12-10-2018 BEN31_09275 d51cf9c7cf2d0a64e6cc6500e74fc357 165 Pfam PF03734 L,D-transpeptidase catalytic domain 57 163 1.2E-19 T 12-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 BEN31_09275 d51cf9c7cf2d0a64e6cc6500e74fc357 165 Gene3D G3DSA:3.10.350.10 1 48 2.3E-12 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_12805 cc1736b23645289fba52bf7e02b7e49c 462 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_12805 cc1736b23645289fba52bf7e02b7e49c 462 PIRSF PIRSF006060 1 461 2.7E-80 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_12805 cc1736b23645289fba52bf7e02b7e49c 462 Pfam PF00324 Amino acid permease 16 443 8.4E-127 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_12805 cc1736b23645289fba52bf7e02b7e49c 462 Gene3D G3DSA:1.20.1740.10 8 459 3.2E-70 T 12-10-2018 BEN31_12805 cc1736b23645289fba52bf7e02b7e49c 462 TIGRFAM TIGR01773 GABAperm: GABA permease 2 447 2.5E-215 T 12-10-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 BEN31_08565 d6a1154542471109e73480c3c377364c 180 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 4 179 38.833 T 12-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 BEN31_08565 d6a1154542471109e73480c3c377364c 180 SUPERFAMILY SSF53271 5 173 3.41E-42 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_08565 d6a1154542471109e73480c3c377364c 180 Gene3D G3DSA:3.40.50.2020 1 180 1.4E-60 T 12-10-2018 BEN31_08565 d6a1154542471109e73480c3c377364c 180 Pfam PF00156 Phosphoribosyl transferase domain 7 150 3.2E-20 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 Pfam PF00874 PRD domain 178 270 1.3E-22 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 Pfam PF00874 PRD domain 73 159 1.7E-24 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 SUPERFAMILY SSF63520 51 163 8.11E-31 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 Pfam PF03123 CAT RNA binding domain 2 55 1.0E-17 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 Gene3D G3DSA:1.20.890.100 164 218 9.7E-19 T 12-10-2018 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 Gene3D G3DSA:1.20.58.1950 223 273 1.4E-9 T 12-10-2018 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 SMART SM01061 1 59 1.7E-21 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 SUPERFAMILY SSF63520 169 272 3.53E-28 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 Gene3D G3DSA:1.10.1790.10 62 163 1.4E-33 T 12-10-2018 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 Gene3D G3DSA:2.30.24.10 1 55 3.5E-19 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 SUPERFAMILY SSF50151 2 53 5.75E-16 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_17105 0b91a3dcc39de7e127879e0b941278c0 277 ProSitePatterns PS00654 PRD domain signature. 95 107 - T 12-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 BEN31_10860 ce9611fd9c05550db02024747b6c6b00 353 Gene3D G3DSA:3.40.630.10 14 342 1.4E-127 T 12-10-2018 BEN31_10860 ce9611fd9c05550db02024747b6c6b00 353 Gene3D G3DSA:2.40.30.40 77 171 1.4E-127 T 12-10-2018 IPR023367 Peptidase M42, domain 2 BEN31_10860 ce9611fd9c05550db02024747b6c6b00 353 PIRSF PIRSF001123 5 346 1.6E-41 T 12-10-2018 IPR008007 Peptidase M42 BEN31_10860 ce9611fd9c05550db02024747b6c6b00 353 SUPERFAMILY SSF101821 74 186 7.33E-32 T 12-10-2018 BEN31_10860 ce9611fd9c05550db02024747b6c6b00 353 Pfam PF05343 M42 glutamyl aminopeptidase 49 337 5.7E-90 T 12-10-2018 IPR008007 Peptidase M42 BEN31_10860 ce9611fd9c05550db02024747b6c6b00 353 SUPERFAMILY SSF53187 7 343 1.51E-56 T 12-10-2018 BEN31_06500 3df77d5a660cc32689cfeb87a838b3eb 276 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 124 253 2.1E-46 T 12-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 BEN31_06500 3df77d5a660cc32689cfeb87a838b3eb 276 Gene3D G3DSA:3.30.1380.10 60 276 1.1E-91 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BEN31_06500 3df77d5a660cc32689cfeb87a838b3eb 276 SUPERFAMILY SSF55166 109 261 3.92E-39 T 12-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 BEN31_01760 eb819b52264d0dfd0c6e2497d281cd96 46 Pfam PF08181 DegQ (SacQ) family 1 46 2.3E-32 T 12-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 BEN31_01760 eb819b52264d0dfd0c6e2497d281cd96 46 ProDom PD014716 DEGQ ENZYME DEGRADATION SACQ REGULATORY REGULATION FACTOR 1 42 7.0E-12 T 12-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 BEN31_11775 11350e86fb2926cb34ccf12793889e7f 418 SUPERFAMILY SSF48452 165 330 8.49E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_11775 11350e86fb2926cb34ccf12793889e7f 418 Gene3D G3DSA:1.25.40.10 165 407 2.4E-20 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_11775 11350e86fb2926cb34ccf12793889e7f 418 SUPERFAMILY SSF47413 3 62 2.73E-14 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_11775 11350e86fb2926cb34ccf12793889e7f 418 Gene3D G3DSA:1.10.260.40 2 66 9.7E-14 T 12-10-2018 BEN31_11775 11350e86fb2926cb34ccf12793889e7f 418 SMART SM00530 8 62 4.1E-8 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_11775 11350e86fb2926cb34ccf12793889e7f 418 Pfam PF01381 Helix-turn-helix 9 58 1.1E-9 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_10490 7702233e7343202c4dcb07ba2240712a 151 Pfam PF12690 Intracellular proteinase inhibitor 51 127 1.0E-26 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI BEN31_10490 7702233e7343202c4dcb07ba2240712a 151 Gene3D G3DSA:2.60.40.2360 33 151 3.4E-40 T 12-10-2018 IPR038144 Intracellular proteinase inhibitor BEN31_10490 7702233e7343202c4dcb07ba2240712a 151 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 33 151 8.0E-34 T 12-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 SMART SM00304 176 228 5.4E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 SMART SM00387 339 442 3.2E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 SMART SM00388 229 295 1.4E-13 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 Gene3D G3DSA:1.10.8.500 175 225 2.2E-7 T 12-10-2018 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 293 1.4E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 SUPERFAMILY SSF47384 213 293 8.44E-15 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 SUPERFAMILY SSF55874 302 440 2.49E-23 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 Gene3D G3DSA:1.10.287.130 226 294 5.3E-15 T 12-10-2018 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 5.4E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 5.4E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 421 5.4E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 439 5.4E-6 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 SUPERFAMILY SSF158472 176 225 8.63E-9 T 12-10-2018 BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 Gene3D G3DSA:3.30.565.10 306 442 2.0E-25 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 440 2.9E-13 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01265 62224b74ee9f120587b93c4d995d8290 443 Pfam PF00672 HAMP domain 176 224 2.3E-9 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_16870 59a6b95e061db8fd795fcf169b5bc195 101 SUPERFAMILY SSF52794 1 100 1.75E-35 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_16870 59a6b95e061db8fd795fcf169b5bc195 101 Gene3D G3DSA:3.40.50.2300 1 101 4.1E-37 T 12-10-2018 BEN31_16870 59a6b95e061db8fd795fcf169b5bc195 101 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 2.0E-37 T 12-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 BEN31_16870 59a6b95e061db8fd795fcf169b5bc195 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 4.0E-22 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 12-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 Gene3D G3DSA:1.10.3430.10 1 402 2.4E-145 T 12-10-2018 IPR029020 Ammonium/urea transporter BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 Pfam PF00909 Ammonium Transporter Family 7 400 2.3E-133 T 12-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 TIGRFAM TIGR00836 amt: ammonium transporter 5 400 1.8E-143 T 12-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 SUPERFAMILY SSF111352 3 380 2.62E-128 T 12-10-2018 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 PRINTS PR00342 Rhesus blood group protein signature 101 117 1.4E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 PRINTS PR00342 Rhesus blood group protein signature 225 247 1.4E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 PRINTS PR00342 Rhesus blood group protein signature 280 298 1.4E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN31_17760 8441a6d89a1442b4654fb5289f794160 402 PRINTS PR00342 Rhesus blood group protein signature 194 212 1.4E-5 T 12-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 BEN31_01045 3f9525dd25d777bfc28833873d90cb54 290 SUPERFAMILY SSF81345 7 258 1.96E-43 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01045 3f9525dd25d777bfc28833873d90cb54 290 Gene3D G3DSA:1.10.3470.10 35 258 2.7E-6 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01045 3f9525dd25d777bfc28833873d90cb54 290 Pfam PF00950 ABC 3 transport family 10 263 8.5E-81 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 251 1.2E-63 T 12-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 2.3E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 PRINTS PR00996 Glutamate methyltransferase family signature 215 238 2.3E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 PRINTS PR00996 Glutamate methyltransferase family signature 97 117 2.3E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 PRINTS PR00996 Glutamate methyltransferase family signature 129 145 2.3E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 PRINTS PR00996 Glutamate methyltransferase family signature 23 36 2.3E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 PRINTS PR00996 Glutamate methyltransferase family signature 196 210 2.3E-39 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 SUPERFAMILY SSF53335 67 240 1.5E-47 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 SUPERFAMILY SSF47757 3 66 6.67E-10 T 12-10-2018 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 54 8.0E-11 T 12-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 SMART SM00138 1 255 2.8E-112 T 12-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 BEN31_05920 a9b3e9ee83a6210a92fa8a5478f88890 259 Gene3D G3DSA:3.40.50.150 66 257 6.0E-69 T 12-10-2018 BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 Gene3D G3DSA:1.20.120.530 80 233 1.1E-30 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 5.3E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 5.3E-6 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 SMART SM00895 99 226 2.0E-23 T 12-10-2018 IPR011711 GntR, C-terminal BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 SMART SM00345 15 74 5.2E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 SUPERFAMILY SSF48008 96 232 3.4E-29 T 12-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 Pfam PF07729 FCD domain 99 225 5.7E-25 T 12-10-2018 IPR011711 GntR, C-terminal BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.2E-19 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 SUPERFAMILY SSF46785 6 90 6.71E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_00555 4af4a25e4614aa9f024f6189e01940a2 245 Gene3D G3DSA:1.10.10.10 1 74 3.8E-22 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_08305 4ac978e1c0878f43d79a385e3d98b1e3 81 Pfam PF13083 KH domain 7 79 2.1E-21 T 12-10-2018 BEN31_08305 4ac978e1c0878f43d79a385e3d98b1e3 81 Hamap MF_00088 UPF0109 protein . 6 80 21.355 T 12-10-2018 IPR020627 Uncharacterised protein family UPF0109 BEN31_08305 4ac978e1c0878f43d79a385e3d98b1e3 81 SUPERFAMILY SSF54814 22 63 1.5E-6 T 12-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 BEN31_08305 4ac978e1c0878f43d79a385e3d98b1e3 81 Gene3D G3DSA:3.30.300.20 5 67 6.9E-6 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 14 422 4.3E-195 T 12-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 1.0E-29 T 12-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 12-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 Gene3D G3DSA:3.40.1020.10 327 422 4.6E-10 T 12-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 SUPERFAMILY SSF53686 13 366 1.31E-97 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 316 8.5E-71 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 Gene3D G3DSA:3.40.50.1100 59 158 2.1E-114 T 12-10-2018 BEN31_06365 869a0856bb48c585011e9db0f63407c8 422 Gene3D G3DSA:3.40.50.1100 24 326 2.1E-114 T 12-10-2018 BEN31_12010 1279459d61c2514e591c2e232e2fc97d 125 SUPERFAMILY SSF82784 23 123 2.62E-20 T 12-10-2018 IPR036102 OsmC/Ohr superfamily BEN31_12010 1279459d61c2514e591c2e232e2fc97d 125 Pfam PF02566 OsmC-like protein 26 120 3.0E-17 T 12-10-2018 IPR003718 OsmC/Ohr family BEN31_12010 1279459d61c2514e591c2e232e2fc97d 125 Gene3D G3DSA:3.30.300.20 1 124 2.8E-19 T 12-10-2018 IPR015946 K homology domain-like, alpha/beta BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 SUPERFAMILY SSF47203 229 379 7.41E-59 T 12-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 Gene3D G3DSA:2.40.110.10 122 234 4.5E-40 T 12-10-2018 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 Gene3D G3DSA:1.20.140.10 235 380 3.9E-56 T 12-10-2018 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 1.1E-52 T 12-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 PIRSF PIRSF016578 3 380 8.6E-26 T 12-10-2018 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 1.9E-24 T 12-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 SUPERFAMILY SSF56645 1 243 5.76E-81 T 12-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 Gene3D G3DSA:1.10.540.10 1 119 1.7E-41 T 12-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 12-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 BEN31_06985 ad498304778d5c7bf602c95e7f6bd750 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 1.3E-34 T 12-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 12-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 547 6.2E-42 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00941 Cadmium-transporting ATPase signature 46 63 2.1E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00941 Cadmium-transporting ATPase signature 118 138 2.1E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 2.1E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00941 Cadmium-transporting ATPase signature 219 233 2.1E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00941 Cadmium-transporting ATPase signature 63 75 2.1E-12 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 SUPERFAMILY SSF81665 85 614 1.02E-15 T 12-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 Gene3D G3DSA:3.40.1110.10 346 465 1.4E-88 T 12-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 SUPERFAMILY SSF81653 141 234 8.63E-27 T 12-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 Pfam PF00122 E1-E2 ATPase 134 313 1.3E-48 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 106 614 3.0E-88 T 12-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 Gene3D G3DSA:3.40.50.1000 316 584 1.4E-88 T 12-10-2018 IPR023214 HAD superfamily BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 556 568 2.2E-31 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 480 490 2.2E-31 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 469 2.2E-31 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 533 552 2.2E-31 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 2.2E-31 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 2.2E-31 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 Gene3D G3DSA:2.70.150.20 127 239 9.2E-37 T 12-10-2018 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 83 635 1.2E-186 T 12-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 BEN31_09390 88db57a0f2f490e9a5b0749397dc63a2 639 SUPERFAMILY SSF56784 333 632 3.34E-57 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_04640 91a685057d5bedc3988f95dcf0494363 159 SUPERFAMILY SSF55486 2 157 7.08E-46 T 12-10-2018 BEN31_04640 91a685057d5bedc3988f95dcf0494363 159 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 123 133 - T 12-10-2018 IPR020549 Endoribonuclease YbeY, conserved site BEN31_04640 91a685057d5bedc3988f95dcf0494363 159 Gene3D G3DSA:3.40.390.30 2 159 2.7E-48 T 12-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 BEN31_04640 91a685057d5bedc3988f95dcf0494363 159 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 154 4.5E-42 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BEN31_04640 91a685057d5bedc3988f95dcf0494363 159 Pfam PF02130 Uncharacterized protein family UPF0054 15 152 7.2E-49 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BEN31_04640 91a685057d5bedc3988f95dcf0494363 159 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 157 24.117 T 12-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 BEN31_13505 04dd999955f8937b4da0ad69dfbb329d 504 Pfam PF04740 LXG domain of WXG superfamily 2 174 8.1E-36 T 12-10-2018 IPR006829 LXG domain BEN31_13505 04dd999955f8937b4da0ad69dfbb329d 504 Pfam PF14449 Pre-toxin TG 229 294 2.5E-18 T 12-10-2018 IPR027797 Pre-toxin TG domain BEN31_03940 cfbab6dd78df40d696bfef86ffb3b098 220 Gene3D G3DSA:3.30.240.20 81 154 7.2E-24 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BEN31_03940 cfbab6dd78df40d696bfef86ffb3b098 220 Gene3D G3DSA:3.30.240.20 160 216 2.2E-14 T 12-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily BEN31_03940 cfbab6dd78df40d696bfef86ffb3b098 220 Pfam PF04239 Protein of unknown function (DUF421) 88 193 7.3E-37 T 12-10-2018 IPR007353 Protein of unknown function DUF421 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 3.4E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 3.4E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 3.4E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 3.4E-29 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 4.0E-80 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 PIRSF PIRSF002888 2 332 1.5E-121 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 322 1.6E-21 T 12-10-2018 IPR001543 Surface presentation of antigen (SpoA) BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 SUPERFAMILY SSF103039 47 232 5.84E-33 T 12-10-2018 IPR028976 CheC-like superfamily BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 Gene3D G3DSA:2.30.330.10 240 326 1.2E-10 T 12-10-2018 IPR036429 SpoA-like superfamily BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 322 2.0E-113 T 12-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 SUPERFAMILY SSF101801 251 323 8.76E-18 T 12-10-2018 IPR036429 SpoA-like superfamily BEN31_08145 f975b726109a0cf9a80fc278aabcc698 332 Gene3D G3DSA:3.40.1550.10 46 231 8.1E-61 T 12-10-2018 IPR028976 CheC-like superfamily BEN31_06335 578db8c641e33d42c414147f95db176f 175 Pfam PF04608 Phosphatidylglycerophosphatase A 23 158 1.4E-18 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 BEN31_06335 578db8c641e33d42c414147f95db176f 175 Gene3D G3DSA:1.10.3760.10 1 165 1.9E-73 T 12-10-2018 BEN31_06335 578db8c641e33d42c414147f95db176f 175 PIRSF PIRSF019587 4 168 3.3E-70 T 12-10-2018 IPR026038 Putative phosphatidylglycerophosphatase BEN31_06335 578db8c641e33d42c414147f95db176f 175 SUPERFAMILY SSF101307 5 162 5.62E-50 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 Gene3D G3DSA:3.40.50.300 283 537 2.7E-40 T 12-10-2018 BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 Pfam PF00005 ABC transporter 18 184 8.9E-22 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 SUPERFAMILY SSF52540 296 524 6.61E-36 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 SUPERFAMILY SSF52540 6 237 2.47E-45 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 Gene3D G3DSA:3.40.50.300 1 280 1.2E-58 T 12-10-2018 BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 Pfam PF12848 ABC transporter 224 309 6.5E-21 T 12-10-2018 IPR032781 ABC-transporter extension domain BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 Pfam PF00005 ABC transporter 335 468 2.3E-13 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 SMART SM00382 344 512 1.0 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_09085 ea32b1e13f8856dbc96be40426b9a16c 539 SMART SM00382 26 228 5.2E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13035 bb49f620e6ee1c8a164863eece829e96 195 Pfam PF01810 LysE type translocator 13 189 4.9E-14 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BEN31_01940 ce9f92f285778e00145ba8e06b2e8c35 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BEN31_01940 ce9f92f285778e00145ba8e06b2e8c35 390 Gene3D G3DSA:1.20.1090.10 185 389 2.3E-44 T 12-10-2018 BEN31_01940 ce9f92f285778e00145ba8e06b2e8c35 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 12-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 BEN31_01940 ce9f92f285778e00145ba8e06b2e8c35 390 SUPERFAMILY SSF56796 1 388 1.06E-115 T 12-10-2018 BEN31_01940 ce9f92f285778e00145ba8e06b2e8c35 390 Gene3D G3DSA:3.40.50.1970 1 184 4.7E-55 T 12-10-2018 BEN31_01940 ce9f92f285778e00145ba8e06b2e8c35 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 365 4.7E-101 T 12-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 BEN31_03180 6c403e0d372eca3d44566680a2911d3a 313 Gene3D G3DSA:3.10.310.30 199 313 9.9E-36 T 12-10-2018 BEN31_03180 6c403e0d372eca3d44566680a2911d3a 313 Pfam PF01368 DHH family 15 153 1.8E-13 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_03180 6c403e0d372eca3d44566680a2911d3a 313 Pfam PF02272 DHHA1 domain 179 308 6.1E-16 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BEN31_03180 6c403e0d372eca3d44566680a2911d3a 313 Gene3D G3DSA:3.90.1640.10 1 197 9.9E-60 T 12-10-2018 BEN31_03180 6c403e0d372eca3d44566680a2911d3a 313 SUPERFAMILY SSF64182 13 281 3.4E-73 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 12-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 2.0E-32 T 12-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 SUPERFAMILY SSF54211 80 159 7.08E-26 T 12-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 1.5E-73 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 SUPERFAMILY SSF54768 8 76 5.34E-25 T 12-10-2018 BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 Gene3D G3DSA:3.30.230.10 74 166 1.2E-36 T 12-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 37.402 T 12-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 3.6E-30 T 12-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 BEN31_14960 67d88bfa34f4188f097b02d5bf63e345 166 Gene3D G3DSA:3.30.160.20 1 73 1.5E-34 T 12-10-2018 BEN31_00345 a5dbfea5b6a5e9ed4d075dde1e910bb4 279 SMART SM00644 14 154 9.4E-37 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_00345 a5dbfea5b6a5e9ed4d075dde1e910bb4 279 SUPERFAMILY SSF55846 8 158 1.01E-47 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_00345 a5dbfea5b6a5e9ed4d075dde1e910bb4 279 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 25 143 5.4E-18 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_00345 a5dbfea5b6a5e9ed4d075dde1e910bb4 279 Pfam PF01471 Putative peptidoglycan binding domain 205 268 6.6E-15 T 12-10-2018 IPR002477 Peptidoglycan binding-like BEN31_00345 a5dbfea5b6a5e9ed4d075dde1e910bb4 279 Gene3D G3DSA:1.10.101.10 193 275 4.8E-21 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN31_00345 a5dbfea5b6a5e9ed4d075dde1e910bb4 279 SUPERFAMILY SSF47090 195 269 1.88E-16 T 12-10-2018 IPR036365 PGBD-like superfamily BEN31_00345 a5dbfea5b6a5e9ed4d075dde1e910bb4 279 Gene3D G3DSA:3.40.80.10 9 171 3.1E-49 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_03505 71c3196c842074d9626aec7c5f3353e3 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 6 202 1.4E-61 T 12-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit BEN31_03505 71c3196c842074d9626aec7c5f3353e3 202 PIRSF PIRSF000170 1 202 1.6E-103 T 12-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute BEN31_03505 71c3196c842074d9626aec7c5f3353e3 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 192 8.7E-14 T 12-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03505 71c3196c842074d9626aec7c5f3353e3 202 Gene3D G3DSA:1.20.1300.10 2 202 5.1E-48 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03505 71c3196c842074d9626aec7c5f3353e3 202 SUPERFAMILY SSF81343 5 201 7.19E-63 T 12-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 BEN31_03520 720c036c4b6204efa5c18ea6933fbfee 153 Gene3D G3DSA:3.10.129.10 8 150 5.0E-34 T 12-10-2018 BEN31_03520 720c036c4b6204efa5c18ea6933fbfee 153 Pfam PF03061 Thioesterase superfamily 34 119 8.4E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN31_03520 720c036c4b6204efa5c18ea6933fbfee 153 SUPERFAMILY SSF54637 14 149 1.36E-34 T 12-10-2018 IPR029069 HotDog domain superfamily BEN31_05375 d545614115ebd08612213636fabc0325 435 Gene3D G3DSA:3.90.1150.10 23 419 4.7E-188 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_05375 d545614115ebd08612213636fabc0325 435 Gene3D G3DSA:3.40.640.10 63 307 4.7E-188 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_05375 d545614115ebd08612213636fabc0325 435 SUPERFAMILY SSF53383 35 413 1.62E-50 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_05375 d545614115ebd08612213636fabc0325 435 Pfam PF12897 Alanine-glyoxylate amino-transferase 7 426 2.2E-185 T 12-10-2018 IPR024551 Aminotransferase, putative BEN31_08045 8778e00b6323c0ba23ffbeb0f6122aeb 240 SUPERFAMILY SSF53633 4 238 2.75E-74 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_08045 8778e00b6323c0ba23ffbeb0f6122aeb 240 Pfam PF00696 Amino acid kinase family 7 217 2.5E-28 T 12-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 BEN31_08045 8778e00b6323c0ba23ffbeb0f6122aeb 240 PIRSF PIRSF005650 1 240 1.1E-97 T 12-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 BEN31_08045 8778e00b6323c0ba23ffbeb0f6122aeb 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 45.088 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BEN31_08045 8778e00b6323c0ba23ffbeb0f6122aeb 240 Gene3D G3DSA:3.40.1160.10 2 239 1.6E-81 T 12-10-2018 IPR036393 Acetylglutamate kinase-like superfamily BEN31_08045 8778e00b6323c0ba23ffbeb0f6122aeb 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.2E-102 T 12-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 BEN31_14705 916b1685b952e356adff8dd15e69d925 273 Hamap MF_01499 Diadenylate cyclase [dacA]. 8 254 34.497 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 BEN31_14705 916b1685b952e356adff8dd15e69d925 273 PIRSF PIRSF004793 4 268 8.0E-98 T 12-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 BEN31_14705 916b1685b952e356adff8dd15e69d925 273 Gene3D G3DSA:3.40.1700.10 101 254 6.6E-64 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BEN31_14705 916b1685b952e356adff8dd15e69d925 273 SUPERFAMILY SSF143597 40 240 2.62E-72 T 12-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily BEN31_14705 916b1685b952e356adff8dd15e69d925 273 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 4 256 7.1E-111 T 12-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 BEN31_14705 916b1685b952e356adff8dd15e69d925 273 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 235 6.4E-44 T 12-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal BEN31_16225 218b983ccf1c26e9356d284f06e89ad9 504 Pfam PF14449 Pre-toxin TG 229 294 1.5E-19 T 12-10-2018 IPR027797 Pre-toxin TG domain BEN31_16225 218b983ccf1c26e9356d284f06e89ad9 504 Pfam PF04740 LXG domain of WXG superfamily 2 174 2.4E-36 T 12-10-2018 IPR006829 LXG domain BEN31_06695 838de73e9dd0f837a2352732ec2c6dab 441 Gene3D G3DSA:1.20.1740.10 6 439 1.0E-69 T 12-10-2018 BEN31_06695 838de73e9dd0f837a2352732ec2c6dab 441 PIRSF PIRSF006060 2 436 9.7E-68 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_06695 838de73e9dd0f837a2352732ec2c6dab 441 Pfam PF00324 Amino acid permease 18 425 4.6E-39 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_07610 613fc83e4bb503809c9bc774502a5d69 136 SUPERFAMILY SSF46955 12 105 3.07E-18 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_07610 613fc83e4bb503809c9bc774502a5d69 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_07610 613fc83e4bb503809c9bc774502a5d69 136 Gene3D G3DSA:1.10.1660.10 1 84 1.2E-25 T 12-10-2018 BEN31_07610 613fc83e4bb503809c9bc774502a5d69 136 SMART SM00422 12 80 7.2E-27 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_07610 613fc83e4bb503809c9bc774502a5d69 136 Pfam PF13411 MerR HTH family regulatory protein 13 78 4.9E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_15465 1da422b42893b65f72ff718b2a1c08a9 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 4.6E-57 T 12-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 BEN31_15465 1da422b42893b65f72ff718b2a1c08a9 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 12-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 BEN31_15465 1da422b42893b65f72ff718b2a1c08a9 125 Gene3D G3DSA:3.30.1330.40 2 125 8.8E-58 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_15465 1da422b42893b65f72ff718b2a1c08a9 125 SUPERFAMILY SSF55298 2 124 8.48E-49 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_15465 1da422b42893b65f72ff718b2a1c08a9 125 Pfam PF01042 Endoribonuclease L-PSP 7 123 3.2E-48 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 Pfam PF00270 DEAD/DEAH box helicase 58 229 5.0E-28 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 Gene3D G3DSA:3.40.50.300 262 466 1.4E-20 T 12-10-2018 BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 SMART SM00490 302 389 9.0E-13 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 Pfam PF00271 Helicase conserved C-terminal domain 284 388 1.6E-12 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 Pfam PF09369 Domain of unknown function (DUF1998) 650 728 4.6E-19 T 12-10-2018 IPR018973 DEAD/DEAH-box helicase, putative BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 Gene3D G3DSA:3.40.50.300 19 245 1.7E-48 T 12-10-2018 BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 SUPERFAMILY SSF52540 66 400 2.6E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06165 3280326881331fb75a04a6c90cd912a1 748 SMART SM00487 51 255 5.2E-29 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_02685 e370b1c20a4a71afbfb74c34502abf09 300 Pfam PF05448 Acetyl xylan esterase (AXE1) 27 188 1.1E-5 T 12-10-2018 IPR008391 Acetyl xylan esterase BEN31_02685 e370b1c20a4a71afbfb74c34502abf09 300 Gene3D G3DSA:3.40.50.1820 1 300 3.1E-59 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_02685 e370b1c20a4a71afbfb74c34502abf09 300 SUPERFAMILY SSF53474 18 300 1.36E-31 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_12300 742ddf997bca26895b1e9b5c8798b0bc 254 SUPERFAMILY SSF53448 1 254 1.42E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_12300 742ddf997bca26895b1e9b5c8798b0bc 254 Pfam PF00483 Nucleotidyl transferase 2 221 2.7E-15 T 12-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 BEN31_12300 742ddf997bca26895b1e9b5c8798b0bc 254 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 254 2.5E-92 T 12-10-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 BEN31_12300 742ddf997bca26895b1e9b5c8798b0bc 254 Gene3D G3DSA:3.90.550.10 1 254 7.2E-65 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 SMART SM01274 64 245 1.1E-94 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PIRSF PIRSF000106 1 547 2.4E-220 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 SUPERFAMILY SSF51735 255 544 3.94E-92 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 ProSitePatterns PS00331 Malic enzymes signature. 251 267 - T 12-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PRINTS PR00072 Malic enzyme signature 70 94 4.2E-69 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PRINTS PR00072 Malic enzyme signature 226 244 4.2E-69 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PRINTS PR00072 Malic enzyme signature 282 298 4.2E-69 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PRINTS PR00072 Malic enzyme signature 394 410 4.2E-69 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PRINTS PR00072 Malic enzyme signature 251 267 4.2E-69 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PRINTS PR00072 Malic enzyme signature 167 189 4.2E-69 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 PRINTS PR00072 Malic enzyme signature 131 160 4.2E-69 T 12-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 SUPERFAMILY SSF53223 2 254 2.66E-100 T 12-10-2018 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 Pfam PF00390 Malic enzyme, N-terminal domain 64 245 3.3E-72 T 12-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 SMART SM00919 255 516 2.6E-125 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 Pfam PF03949 Malic enzyme, NAD binding domain 255 516 9.6E-105 T 12-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 Gene3D G3DSA:3.40.50.720 253 547 2.1E-109 T 12-10-2018 BEN31_02850 98955095dd5036f19fe43d9933b4f3d4 547 Gene3D G3DSA:3.40.50.10380 1 252 5.4E-103 T 12-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 BEN31_09860 5dedc9396c99d946268353177c27be25 343 SUPERFAMILY SSF51735 135 305 9.52E-36 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_09860 5dedc9396c99d946268353177c27be25 343 Gene3D G3DSA:3.40.50.720 149 286 1.8E-95 T 12-10-2018 BEN31_09860 5dedc9396c99d946268353177c27be25 343 SMART SM00829 8 339 8.0E-7 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_09860 5dedc9396c99d946268353177c27be25 343 SUPERFAMILY SSF50129 1 171 2.28E-45 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_09860 5dedc9396c99d946268353177c27be25 343 Gene3D G3DSA:3.90.180.10 10 326 1.8E-95 T 12-10-2018 BEN31_09860 5dedc9396c99d946268353177c27be25 343 Pfam PF00107 Zinc-binding dehydrogenase 173 300 1.3E-24 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_09860 5dedc9396c99d946268353177c27be25 343 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 125 6.9E-28 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_09860 5dedc9396c99d946268353177c27be25 343 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 56 70 - T 12-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 BEN31_11305 a4c6d43c8bcaea83570351205d833b2c 214 Pfam PF07875 Coat F domain 120 179 1.2E-16 T 12-10-2018 IPR012851 Spore coat protein CotF-like BEN31_04100 a37da2bc07a652af901229dcfca68f9c 94 Hamap MF_01448 UPF0473 protein . 4 89 21.711 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 BEN31_04100 a37da2bc07a652af901229dcfca68f9c 94 Pfam PF06949 Protein of unknown function (DUF1292) 13 88 5.1E-19 T 12-10-2018 IPR009711 Uncharacterised protein family UPF0473 BEN31_04810 4c31ed74da55ae749068a95c183742ea 428 Gene3D G3DSA:1.20.1250.20 217 406 1.5E-5 T 12-10-2018 BEN31_04810 4c31ed74da55ae749068a95c183742ea 428 SUPERFAMILY SSF103473 15 400 1.01E-31 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_04810 4c31ed74da55ae749068a95c183742ea 428 Pfam PF07690 Major Facilitator Superfamily 25 336 2.3E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_04810 4c31ed74da55ae749068a95c183742ea 428 Gene3D G3DSA:1.20.1250.20 12 204 1.6E-16 T 12-10-2018 BEN31_00820 b8d37836ec7d95c0836f37706576c090 118 Gene3D G3DSA:3.30.40.60 21 115 2.5E-5 T 12-10-2018 BEN31_00820 b8d37836ec7d95c0836f37706576c090 118 SMART SM00507 50 105 8.2E-9 T 12-10-2018 IPR003615 HNH nuclease BEN31_00820 b8d37836ec7d95c0836f37706576c090 118 Pfam PF01844 HNH endonuclease 62 109 3.9E-11 T 12-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 BEN31_17040 fb9366ded473eea32ff903dde761129d 506 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 23 233 2.0E-32 T 12-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BEN31_17040 fb9366ded473eea32ff903dde761129d 506 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 261 278 - T 12-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17040 fb9366ded473eea32ff903dde761129d 506 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 9 502 8.1E-215 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17040 fb9366ded473eea32ff903dde761129d 506 PIRSF PIRSF006005 3 505 8.3E-216 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17040 fb9366ded473eea32ff903dde761129d 506 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 506 255.735 T 12-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 BEN31_17040 fb9366ded473eea32ff903dde761129d 506 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 249 435 5.1E-35 T 12-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 BEN31_05030 71a808574ebee7507d2a34a72a379849 278 Gene3D G3DSA:3.30.930.10 4 278 1.6E-68 T 12-10-2018 BEN31_05030 71a808574ebee7507d2a34a72a379849 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 68.203 T 12-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN31_05030 71a808574ebee7507d2a34a72a379849 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 2.9E-30 T 12-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 BEN31_05030 71a808574ebee7507d2a34a72a379849 278 SUPERFAMILY SSF55681 5 278 8.29E-70 T 12-10-2018 BEN31_01405 da7a03d1c6e207fa2b82e9ca0562140a 310 Pfam PF08279 HTH domain 6 61 9.6E-8 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_01405 da7a03d1c6e207fa2b82e9ca0562140a 310 Pfam PF13280 WYL domain 140 306 7.6E-24 T 12-10-2018 IPR026881 WYL domain BEN31_01405 da7a03d1c6e207fa2b82e9ca0562140a 310 SUPERFAMILY SSF46785 1 63 6.82E-7 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_01405 da7a03d1c6e207fa2b82e9ca0562140a 310 Gene3D G3DSA:1.10.10.10 1 63 4.9E-6 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 SUPERFAMILY SSF161093 278 448 6.41E-53 T 12-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 Pfam PF03448 MgtE intracellular N domain 33 133 8.2E-23 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 Gene3D G3DSA:1.25.60.10 6 131 2.7E-20 T 12-10-2018 IPR038076 MgtE, N-terminal domain superfamily BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 Pfam PF00571 CBS domain 136 192 9.1E-6 T 12-10-2018 IPR000644 CBS domain BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 Pfam PF00571 CBS domain 200 253 5.7E-8 T 12-10-2018 IPR000644 CBS domain BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 Pfam PF01769 Divalent cation transporter 320 441 4.3E-31 T 12-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 Gene3D G3DSA:1.10.357.20 273 449 2.7E-60 T 12-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 TIGRFAM TIGR00400 mgtE: magnesium transporter 4 450 9.5E-202 T 12-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 SUPERFAMILY SSF158791 8 132 6.67E-27 T 12-10-2018 BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 SUPERFAMILY SSF54631 135 266 7.33E-31 T 12-10-2018 BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 SMART SM00116 143 196 8.9 T 12-10-2018 IPR000644 CBS domain BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 SMART SM00116 207 255 9.0E-6 T 12-10-2018 IPR000644 CBS domain BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 SMART SM00924 33 136 3.7E-28 T 12-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain BEN31_09620 d107d6a3b6a521b1af7dfadb04dd764b 452 Gene3D G3DSA:3.10.580.10 133 259 2.8E-42 T 12-10-2018 BEN31_08610 85bbd95ca349966efc85c9ccb0b8faba 229 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 75 89 - T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN31_08610 85bbd95ca349966efc85c9ccb0b8faba 229 Pfam PF01168 Alanine racemase, N-terminal domain 6 223 2.9E-20 T 12-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 BEN31_08610 85bbd95ca349966efc85c9ccb0b8faba 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 224 1.9E-56 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN31_08610 85bbd95ca349966efc85c9ccb0b8faba 229 Gene3D G3DSA:3.20.20.10 1 227 1.6E-77 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_08610 85bbd95ca349966efc85c9ccb0b8faba 229 PIRSF PIRSF004848 2 227 1.2E-69 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN31_08610 85bbd95ca349966efc85c9ccb0b8faba 229 SUPERFAMILY SSF51419 2 223 1.74E-73 T 12-10-2018 IPR029066 PLP-binding barrel BEN31_08610 85bbd95ca349966efc85c9ccb0b8faba 229 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 224 28.898 T 12-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 BEN31_01420 588ddcb645844a7a937fa9b4e0d2b6fe 435 SUPERFAMILY SSF47384 215 295 2.16E-9 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_01420 588ddcb645844a7a937fa9b4e0d2b6fe 435 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 288 2.1E-8 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01420 588ddcb645844a7a937fa9b4e0d2b6fe 435 SMART SM00388 230 297 6.4E-6 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01420 588ddcb645844a7a937fa9b4e0d2b6fe 435 Gene3D G3DSA:1.10.287.130 169 292 3.6E-13 T 12-10-2018 BEN31_01420 588ddcb645844a7a937fa9b4e0d2b6fe 435 SUPERFAMILY SSF55874 300 415 2.82E-6 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01420 588ddcb645844a7a937fa9b4e0d2b6fe 435 Gene3D G3DSA:3.30.565.10 304 429 2.3E-6 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01565 df85873401725173b6e689fbac0ed8f5 109 SUPERFAMILY SSF52833 2 105 9.84E-47 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_01565 df85873401725173b6e689fbac0ed8f5 109 PIRSF PIRSF010603 1 106 6.5E-50 T 12-10-2018 IPR009190 Protein of unknown function DUF1462 BEN31_01565 df85873401725173b6e689fbac0ed8f5 109 Gene3D G3DSA:3.40.30.30 1 105 5.9E-43 T 12-10-2018 IPR038218 YuzD-like superfamily BEN31_01565 df85873401725173b6e689fbac0ed8f5 109 Pfam PF07315 Protein of unknown function (DUF1462) 9 100 1.1E-43 T 12-10-2018 IPR009190 Protein of unknown function DUF1462 BEN31_00435 57fdfe672031276d09d9f67ca87254db 301 Gene3D G3DSA:3.40.50.1980 23 143 2.7E-18 T 12-10-2018 BEN31_00435 57fdfe672031276d09d9f67ca87254db 301 Gene3D G3DSA:3.40.50.1980 145 301 1.4E-40 T 12-10-2018 BEN31_00435 57fdfe672031276d09d9f67ca87254db 301 Pfam PF01497 Periplasmic binding protein 39 273 1.6E-34 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_00435 57fdfe672031276d09d9f67ca87254db 301 SUPERFAMILY SSF53807 35 284 7.06E-49 T 12-10-2018 BEN31_02620 54eafa10a139f9334357665045da248c 191 Pfam PF06962 Putative rRNA methylase 48 186 6.6E-49 T 12-10-2018 IPR010719 Putative rRNA methylase BEN31_02620 54eafa10a139f9334357665045da248c 191 Gene3D G3DSA:3.40.50.150 1 190 2.7E-70 T 12-10-2018 BEN31_02620 54eafa10a139f9334357665045da248c 191 SUPERFAMILY SSF53335 18 161 2.03E-25 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_07665 a7da789cc0c6115ac4362b67de906747 73 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 64 29.964 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BEN31_07665 a7da789cc0c6115ac4362b67de906747 73 SUPERFAMILY SSF50182 5 63 3.89E-24 T 12-10-2018 IPR010920 LSM domain superfamily BEN31_07665 a7da789cc0c6115ac4362b67de906747 73 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 5.8E-32 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BEN31_07665 a7da789cc0c6115ac4362b67de906747 73 Gene3D G3DSA:2.30.30.100 1 73 1.7E-35 T 12-10-2018 BEN31_07665 a7da789cc0c6115ac4362b67de906747 73 Pfam PF17209 Hfq protein 6 68 3.6E-33 T 12-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 BEN31_16240 4623ea26bf3381236ef6e7785adef6f0 397 SUPERFAMILY SSF103473 6 392 2.62E-50 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_16240 4623ea26bf3381236ef6e7785adef6f0 397 Pfam PF07690 Major Facilitator Superfamily 13 298 9.8E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_16240 4623ea26bf3381236ef6e7785adef6f0 397 Gene3D G3DSA:1.20.1250.20 203 393 2.6E-16 T 12-10-2018 BEN31_16240 4623ea26bf3381236ef6e7785adef6f0 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_16240 4623ea26bf3381236ef6e7785adef6f0 397 Gene3D G3DSA:1.20.1250.20 1 195 2.1E-26 T 12-10-2018 BEN31_00235 e1bdb4f44c7422844fbfb59da686623e 181 SUPERFAMILY SSF56349 10 172 2.33E-31 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN31_00235 e1bdb4f44c7422844fbfb59da686623e 181 Gene3D G3DSA:1.10.443.10 3 180 4.4E-30 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN31_00235 e1bdb4f44c7422844fbfb59da686623e 181 Pfam PF00589 Phage integrase family 17 165 6.4E-25 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN31_17250 dc0e8c43cced0878bbed0e8e49bde7f8 473 Gene3D G3DSA:3.30.470.20 229 373 4.8E-52 T 12-10-2018 BEN31_17250 dc0e8c43cced0878bbed0e8e49bde7f8 473 SUPERFAMILY SSF56059 128 373 3.36E-32 T 12-10-2018 BEN31_17250 dc0e8c43cced0878bbed0e8e49bde7f8 473 Gene3D G3DSA:3.90.1170.60 374 467 4.9E-29 T 12-10-2018 BEN31_17250 dc0e8c43cced0878bbed0e8e49bde7f8 473 Pfam PF13535 ATP-grasp domain 172 333 2.2E-13 T 12-10-2018 BEN31_17250 dc0e8c43cced0878bbed0e8e49bde7f8 473 Gene3D G3DSA:3.30.1490.20 137 228 1.6E-18 T 12-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 BEN31_17250 dc0e8c43cced0878bbed0e8e49bde7f8 473 Gene3D G3DSA:3.40.50.20 1 136 2.8E-64 T 12-10-2018 BEN31_11925 12f137d574b936eece5ad6e892db5258 289 SUPERFAMILY SSF48150 108 284 2.44E-37 T 12-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 BEN31_11925 12f137d574b936eece5ad6e892db5258 289 SMART SM00478 126 286 5.8E-26 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN31_11925 12f137d574b936eece5ad6e892db5258 289 Gene3D G3DSA:1.10.1670.40 99 283 2.3E-48 T 12-10-2018 BEN31_11925 12f137d574b936eece5ad6e892db5258 289 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 123 271 3.6E-21 T 12-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 BEN31_11925 12f137d574b936eece5ad6e892db5258 289 Gene3D G3DSA:1.10.340.30 114 233 2.3E-48 T 12-10-2018 BEN31_11595 eb17b21c4136af2a2d868d741bcf10e6 357 Pfam PF06081 Aromatic acid exporter family member 1 1 142 3.1E-41 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 BEN31_11780 1959adf593c762722878c1d21257426b 155 Pfam PF04134 Protein of unknown function, DUF393 32 137 4.2E-12 T 12-10-2018 IPR007263 Protein of unknown function DUF393 BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 Gene3D G3DSA:2.160.20.10 13 380 8.1E-44 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SUPERFAMILY SSF51126 12 436 8.78E-33 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 Pfam PF13229 Right handed beta helix region 98 226 1.3E-10 T 12-10-2018 IPR039448 Right handed beta helix domain BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 Pfam PF13229 Right handed beta helix region 310 439 2.2E-10 T 12-10-2018 IPR039448 Right handed beta helix domain BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 Gene3D G3DSA:2.160.20.10 406 586 2.8E-6 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SUPERFAMILY SSF51126 411 551 1.15E-9 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 245 275 120.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 364 391 200.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 183 205 26.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 320 341 450.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 108 147 890.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 413 434 16.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 287 313 1800.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 206 228 1700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 392 412 7300.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_13805 591263a482abc7ffa21e2e11ed38705e 594 SMART SM00710 148 170 64.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 SMART SM00490 260 341 5.5E-29 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 SMART SM00487 23 224 1.6E-52 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 SUPERFAMILY SSF52540 72 362 1.38E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 438 48.983 T 12-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 Pfam PF00270 DEAD/DEAH box helicase 28 196 3.0E-45 T 12-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 Gene3D G3DSA:3.40.50.300 217 438 8.0E-45 T 12-10-2018 BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 Gene3D G3DSA:3.40.50.300 2 216 8.3E-68 T 12-10-2018 BEN31_04730 561614a597c95e0cbb6a3139708217a0 439 Pfam PF00271 Helicase conserved C-terminal domain 232 341 3.0E-27 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_13430 9751dacdd0b5dedef73a92ca9a3efa31 308 Gene3D G3DSA:3.40.50.300 2 248 2.0E-59 T 12-10-2018 BEN31_13430 9751dacdd0b5dedef73a92ca9a3efa31 308 SMART SM00382 30 210 4.7E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13430 9751dacdd0b5dedef73a92ca9a3efa31 308 SUPERFAMILY SSF52540 4 227 3.15E-58 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_13430 9751dacdd0b5dedef73a92ca9a3efa31 308 Pfam PF00005 ABC transporter 21 162 9.9E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_13430 9751dacdd0b5dedef73a92ca9a3efa31 308 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_03260 d69b658301d204124484b44bf9b83085 242 Gene3D G3DSA:3.40.50.2300 1 136 1.4E-41 T 12-10-2018 BEN31_03260 d69b658301d204124484b44bf9b83085 242 SMART SM00862 159 235 3.5E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_03260 d69b658301d204124484b44bf9b83085 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 235 1.3E-29 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_03260 d69b658301d204124484b44bf9b83085 242 SUPERFAMILY SSF52172 2 131 1.71E-44 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_03260 d69b658301d204124484b44bf9b83085 242 Gene3D G3DSA:1.10.10.10 137 241 1.4E-37 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03260 d69b658301d204124484b44bf9b83085 242 SMART SM00448 3 114 7.6E-50 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_03260 d69b658301d204124484b44bf9b83085 242 Pfam PF00072 Response regulator receiver domain 5 114 2.7E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_03260 d69b658301d204124484b44bf9b83085 242 SUPERFAMILY SSF46894 139 236 1.05E-31 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_09585 d4777ca40c81725f7063d137fa139718 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 7.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09585 d4777ca40c81725f7063d137fa139718 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 7.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09585 d4777ca40c81725f7063d137fa139718 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 7.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09585 d4777ca40c81725f7063d137fa139718 153 Gene3D G3DSA:1.10.10.10 2 149 1.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09585 d4777ca40c81725f7063d137fa139718 153 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN31_09585 d4777ca40c81725f7063d137fa139718 153 SMART SM00347 33 133 7.0E-35 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09585 d4777ca40c81725f7063d137fa139718 153 Pfam PF01047 MarR family 41 98 4.9E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_09585 d4777ca40c81725f7063d137fa139718 153 SUPERFAMILY SSF46785 13 142 1.44E-32 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14565 47236dbbbe274b7fd48dcc7e249cab65 241 Pfam PF14511 Type II restriction endonuclease EcoO109I 11 212 3.5E-45 T 12-10-2018 IPR032793 Type II restriction endonuclease EcoO109IR BEN31_14565 47236dbbbe274b7fd48dcc7e249cab65 241 SUPERFAMILY SSF52980 32 235 3.16E-38 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 PIRSF PIRSF004640 1 361 1.4E-156 T 12-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 Gene3D G3DSA:3.30.413.10 261 360 6.3E-36 T 12-10-2018 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 SUPERFAMILY SSF51717 15 236 2.28E-19 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.528 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 Gene3D G3DSA:3.20.20.20 1 259 2.1E-110 T 12-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 Pfam PF04551 GcpE protein 10 351 9.2E-141 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 SUPERFAMILY SSF56014 263 357 3.6E-14 T 12-10-2018 BEN31_04780 12df619ed69d8030c5b914617d5a14c6 370 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 9.1E-132 T 12-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 BEN31_18645 b530be8c0cc08fd67ec27e4f0d73906d 247 PRINTS PR01543 Arylamine N-acetyltransferase signature 18 41 3.3E-7 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_18645 b530be8c0cc08fd67ec27e4f0d73906d 247 PRINTS PR01543 Arylamine N-acetyltransferase signature 99 124 3.3E-7 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_18645 b530be8c0cc08fd67ec27e4f0d73906d 247 PRINTS PR01543 Arylamine N-acetyltransferase signature 66 88 3.3E-7 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_18645 b530be8c0cc08fd67ec27e4f0d73906d 247 PRINTS PR01543 Arylamine N-acetyltransferase signature 42 65 3.3E-7 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_18645 b530be8c0cc08fd67ec27e4f0d73906d 247 Gene3D G3DSA:3.30.2140.20 1 246 8.1E-63 T 12-10-2018 BEN31_18645 b530be8c0cc08fd67ec27e4f0d73906d 247 Pfam PF00797 N-acetyltransferase 20 231 4.3E-42 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_18645 b530be8c0cc08fd67ec27e4f0d73906d 247 SUPERFAMILY SSF54001 2 245 4.91E-55 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 SUPERFAMILY SSF52540 530 703 9.61E-33 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 801 25.717 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 Pfam PF00271 Helicase conserved C-terminal domain 558 659 5.3E-8 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 Pfam PF04851 Type III restriction enzyme, res subunit 264 428 2.9E-19 T 12-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 SUPERFAMILY SSF52540 163 446 4.63E-42 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 SMART SM00487 261 452 6.0E-26 T 12-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 TIGRFAM TIGR00595 priA: primosomal protein N' 289 799 2.4E-228 T 12-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 SMART SM00490 563 660 9.0E-9 T 12-10-2018 IPR001650 Helicase, C-terminal BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 Gene3D G3DSA:1.10.8.630 1 114 1.8E-25 T 12-10-2018 BEN31_08445 bb44761eaa96567a0f4c5117ac51e58e 802 Gene3D G3DSA:3.40.50.300 252 445 1.1E-77 T 12-10-2018 BEN31_07790 fe00da5e9db68c5f3073fb1e2397c702 264 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 264 3.7E-121 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like BEN31_07790 fe00da5e9db68c5f3073fb1e2397c702 264 Pfam PF13277 YmdB-like protein 4 254 5.6E-114 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like BEN31_07790 fe00da5e9db68c5f3073fb1e2397c702 264 SUPERFAMILY SSF56300 1 256 6.96E-91 T 12-10-2018 BEN31_07790 fe00da5e9db68c5f3073fb1e2397c702 264 Gene3D G3DSA:3.60.21.10 1 264 4.9E-121 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_07790 fe00da5e9db68c5f3073fb1e2397c702 264 PIRSF PIRSF004789 1 262 1.3E-107 T 12-10-2018 IPR005235 Metallophosphoesterase, YmdB-like BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 TIGRFAM TIGR03063 srtB_target: sortase B cell surface sorting signal 570 597 5.6E-8 T 12-10-2018 IPR017502 Sortase B cell surface sorting signal BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 Pfam PF05031 Iron Transport-associated domain 36 150 2.1E-33 T 12-10-2018 IPR006635 NEAT domain BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 Pfam PF05031 Iron Transport-associated domain 387 503 6.0E-29 T 12-10-2018 IPR006635 NEAT domain BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 Pfam PF05031 Iron Transport-associated domain 228 344 7.0E-34 T 12-10-2018 IPR006635 NEAT domain BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 SUPERFAMILY SSF158911 381 508 4.84E-36 T 12-10-2018 IPR037250 NEAT domain superfamily BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 SUPERFAMILY SSF158911 23 163 4.97E-38 T 12-10-2018 IPR037250 NEAT domain superfamily BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 Gene3D G3DSA:2.60.40.1850 379 505 2.3E-36 T 12-10-2018 BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 Gene3D G3DSA:2.60.40.1850 223 348 3.4E-42 T 12-10-2018 BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 Gene3D G3DSA:2.60.40.1850 20 155 1.1E-46 T 12-10-2018 BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 SMART SM00725 388 509 2.5E-27 T 12-10-2018 IPR006635 NEAT domain BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 SMART SM00725 230 351 2.6E-34 T 12-10-2018 IPR006635 NEAT domain BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 SMART SM00725 36 157 4.4E-37 T 12-10-2018 IPR006635 NEAT domain BEN31_16770 21dd4e5b8a18ac02bbd0a05ac6d901d0 602 SUPERFAMILY SSF158911 222 353 1.44E-37 T 12-10-2018 IPR037250 NEAT domain superfamily BEN31_11290 bf246f7eb6a77e3fba931b28d827e9ea 188 Pfam PF04203 Sortase family 64 185 2.9E-26 T 12-10-2018 IPR005754 Sortase family BEN31_11290 bf246f7eb6a77e3fba931b28d827e9ea 188 TIGRFAM TIGR01076 sortase_fam: sortase 62 186 1.2E-39 T 12-10-2018 IPR005754 Sortase family BEN31_11290 bf246f7eb6a77e3fba931b28d827e9ea 188 SUPERFAMILY SSF63817 50 186 1.44E-33 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_11290 bf246f7eb6a77e3fba931b28d827e9ea 188 Gene3D G3DSA:2.40.260.10 23 188 2.0E-41 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_17600 7aa1768f7a1f63895aa5623e821c5544 127 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 127 1.0E-39 T 12-10-2018 BEN31_17600 7aa1768f7a1f63895aa5623e821c5544 127 Pfam PF03899 ATP synthase I chain 10 105 5.5E-17 T 12-10-2018 IPR005598 ATP synthase protein I BEN31_10990 2f76527af8beefd398d50de80e7b8ccb 404 SUPERFAMILY SSF56300 5 308 3.49E-51 T 12-10-2018 BEN31_10990 2f76527af8beefd398d50de80e7b8ccb 404 Pfam PF00149 Calcineurin-like phosphoesterase 4 202 3.6E-14 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_10990 2f76527af8beefd398d50de80e7b8ccb 404 PIRSF PIRSF033091 1 404 2.9E-134 T 12-10-2018 IPR014576 Predicted phosphoesterase, YhaO type BEN31_10990 2f76527af8beefd398d50de80e7b8ccb 404 Gene3D G3DSA:3.60.21.10 2 253 7.6E-54 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_15445 670f77faa5242f154830244ac88678e2 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 181 26.091 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN31_15445 670f77faa5242f154830244ac88678e2 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 4 178 5.7E-58 T 12-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN31_15445 670f77faa5242f154830244ac88678e2 208 Pfam PF01386 Ribosomal L25p family 4 90 1.5E-21 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN31_15445 670f77faa5242f154830244ac88678e2 208 Gene3D G3DSA:2.40.240.10 1 93 1.2E-25 T 12-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN31_15445 670f77faa5242f154830244ac88678e2 208 Gene3D G3DSA:2.170.120.20 96 187 1.4E-27 T 12-10-2018 IPR037121 Ribosomal protein L25, C-terminal BEN31_15445 670f77faa5242f154830244ac88678e2 208 SUPERFAMILY SSF50715 2 185 2.09E-54 T 12-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 BEN31_15445 670f77faa5242f154830244ac88678e2 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 91 2.0E-31 T 12-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 BEN31_15445 670f77faa5242f154830244ac88678e2 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 181 2.5E-26 T 12-10-2018 IPR020057 Ribosomal protein L25, beta domain BEN31_10920 6b31b14a4481df6e878470dfd7ed5c81 246 Gene3D G3DSA:3.40.50.300 1 245 4.9E-63 T 12-10-2018 BEN31_10920 6b31b14a4481df6e878470dfd7ed5c81 246 SMART SM00382 28 213 4.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_10920 6b31b14a4481df6e878470dfd7ed5c81 246 Pfam PF00005 ABC transporter 19 162 5.0E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_10920 6b31b14a4481df6e878470dfd7ed5c81 246 SUPERFAMILY SSF52540 3 232 3.3E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 Gene3D G3DSA:1.10.10.10 1 140 1.5E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 SMART SM00347 25 125 5.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.0E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.0E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.0E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.0E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 SUPERFAMILY SSF46785 7 139 3.56E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_01115 0544ac28c30d0d84607f04838a5a5ec6 142 Pfam PF13463 Winged helix DNA-binding domain 33 98 2.9E-7 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 Pfam PF01047 MarR family 36 94 4.7E-12 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 SMART SM00347 29 129 9.0E-22 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 4.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 4.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 4.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 4.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 SUPERFAMILY SSF46785 22 145 9.25E-28 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07840 8236a97c5c788bcf00a3dc42bd126ca8 158 Gene3D G3DSA:1.10.10.10 2 158 6.3E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16610 cf79b802094d2f2bc37c7ca9e63f8f4c 374 Gene3D G3DSA:3.20.20.210 10 374 9.2E-129 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_16610 cf79b802094d2f2bc37c7ca9e63f8f4c 374 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 20 348 2.1E-18 T 12-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 BEN31_16610 cf79b802094d2f2bc37c7ca9e63f8f4c 374 SUPERFAMILY SSF51726 18 373 6.28E-85 T 12-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 BEN31_08265 7d1dbade91de7f7be92d0449836c542b 91 SUPERFAMILY SSF160544 5 86 4.71E-24 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN31_08265 7d1dbade91de7f7be92d0449836c542b 91 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 82 1.1E-19 T 12-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 BEN31_08265 7d1dbade91de7f7be92d0449836c542b 91 Gene3D G3DSA:3.40.1690.10 6 88 1.1E-26 T 12-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal BEN31_08265 7d1dbade91de7f7be92d0449836c542b 91 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 8 88 1.1E-36 T 12-10-2018 IPR004683 Type III secretion system substrate exporter FlhB-like BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 Pfam PF00793 DAHP synthetase I family 111 346 1.5E-82 T 12-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 Gene3D G3DSA:1.20.59.10 8 92 1.0E-27 T 12-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 Pfam PF01817 Chorismate mutase type II 10 87 2.1E-17 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 SUPERFAMILY SSF51569 28 353 3.94E-103 T 12-10-2018 BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 101 1.1E-48 T 12-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 350 6.8E-121 T 12-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 SMART SM00830 10 89 1.8E-19 T 12-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 BEN31_02915 1dc8c0f3bd17e2bc45214e9f034aad2b 358 Gene3D G3DSA:3.20.20.70 93 355 2.1E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_02855 b09cf79912f3272298b2b7c5a74e8bfe 104 Pfam PF03413 Peptidase propeptide and YPEB domain 29 98 2.8E-5 T 12-10-2018 IPR025711 PepSY domain BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 SMART SM00640 33 445 2.5E-152 T 12-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 33 339 1.7E-107 T 12-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 385 469 2.0E-14 T 12-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 33 46 - T 12-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 Gene3D G3DSA:2.60.120.560 359 479 1.3E-17 T 12-10-2018 BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 SUPERFAMILY SSF49899 340 480 1.82E-20 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 SUPERFAMILY SSF75005 24 340 8.01E-114 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 Gene3D G3DSA:2.115.10.20 2 358 1.9E-117 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN31_17115 4994795816cd27f1552358b0b6d4d28d 485 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 18 455 5.3E-173 T 12-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 BEN31_01670 56533627e6e5a94f8104d864913c65d2 79 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 3 78 7.9E-12 T 12-10-2018 IPR024962 YukD-like BEN31_01670 56533627e6e5a94f8104d864913c65d2 79 Gene3D G3DSA:3.10.20.90 1 79 6.3E-39 T 12-10-2018 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 6 429 1.9E-206 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 Pfam PF02040 Arsenical pump membrane protein 6 428 1.3E-204 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_13990 06f51af81a2062cdf8d06ac6d635f881 432 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 2.7E-102 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 Pfam PF01740 STAS domain 154 256 7.7E-7 T 12-10-2018 IPR002645 STAS domain BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 Pfam PF13426 PAS domain 27 130 2.4E-19 T 12-10-2018 IPR000014 PAS domain BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 SMART SM00091 14 83 1.2E-4 T 12-10-2018 IPR000014 PAS domain BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 137 1.8E-19 T 12-10-2018 IPR000014 PAS domain BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 Gene3D G3DSA:3.30.750.24 149 264 8.2E-27 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 Gene3D G3DSA:3.30.450.20 9 148 2.0E-48 T 12-10-2018 BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 SUPERFAMILY SSF52091 150 258 1.96E-12 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 SUPERFAMILY SSF55785 21 131 4.79E-25 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_02670 d4d82d61d82e141186b52e9a60fe0a2e 267 SMART SM00086 89 131 1.3E-8 T 12-10-2018 IPR001610 PAC motif BEN31_13090 da2ba47bcec17736d601d536a1914700 261 Gene3D G3DSA:3.40.630.30 123 249 1.4E-33 T 12-10-2018 BEN31_13090 da2ba47bcec17736d601d536a1914700 261 Pfam PF12746 GNAT acetyltransferase 23 258 4.3E-55 T 12-10-2018 IPR027365 GNAT acetyltransferase YdfB-like BEN31_13090 da2ba47bcec17736d601d536a1914700 261 SUPERFAMILY SSF55729 150 259 1.4E-14 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_14260 f7afa82505fbd9852c14a78da0ea006d 309 PRINTS PR00069 Aldo-keto reductase signature 44 68 2.0E-16 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14260 f7afa82505fbd9852c14a78da0ea006d 309 PRINTS PR00069 Aldo-keto reductase signature 110 128 2.0E-16 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14260 f7afa82505fbd9852c14a78da0ea006d 309 PRINTS PR00069 Aldo-keto reductase signature 241 265 2.0E-16 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14260 f7afa82505fbd9852c14a78da0ea006d 309 PRINTS PR00069 Aldo-keto reductase signature 141 158 2.0E-16 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_14260 f7afa82505fbd9852c14a78da0ea006d 309 SUPERFAMILY SSF51430 2 308 5.63E-95 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_14260 f7afa82505fbd9852c14a78da0ea006d 309 Gene3D G3DSA:3.20.20.100 1 309 1.2E-114 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_14260 f7afa82505fbd9852c14a78da0ea006d 309 Pfam PF00248 Aldo/keto reductase family 15 307 9.5E-75 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN31_03410 cfe5abce134801e4fc3f6959f0b27b01 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 48.943 T 12-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 BEN31_03410 cfe5abce134801e4fc3f6959f0b27b01 344 Gene3D G3DSA:3.30.930.10 9 343 8.8E-127 T 12-10-2018 BEN31_03410 cfe5abce134801e4fc3f6959f0b27b01 344 SUPERFAMILY SSF55681 93 342 2.64E-82 T 12-10-2018 BEN31_03410 cfe5abce134801e4fc3f6959f0b27b01 344 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 4.8E-108 T 12-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 BEN31_03410 cfe5abce134801e4fc3f6959f0b27b01 344 SUPERFAMILY SSF46589 14 99 2.14E-21 T 12-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 BEN31_03410 cfe5abce134801e4fc3f6959f0b27b01 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 8.3E-116 T 12-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 BEN31_03410 cfe5abce134801e4fc3f6959f0b27b01 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 3.6E-25 T 12-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 BEN31_14175 8b022a93706517bb512e214f000dae25 443 PIRSF PIRSF020967 84 252 1.6E-24 T 12-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 BEN31_14175 8b022a93706517bb512e214f000dae25 443 PIRSF PIRSF020967 3 68 4.0E-12 T 12-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 BEN31_14175 8b022a93706517bb512e214f000dae25 443 PIRSF PIRSF020967 274 436 1.7E-11 T 12-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 BEN31_14175 8b022a93706517bb512e214f000dae25 443 SUPERFAMILY SSF53271 80 211 1.19E-8 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_14175 8b022a93706517bb512e214f000dae25 443 Pfam PF12500 TRSP domain C terminus to PRTase_2 296 420 8.1E-44 T 12-10-2018 IPR022537 TRSP domain BEN31_14175 8b022a93706517bb512e214f000dae25 443 Pfam PF15609 Phosphoribosyl transferase 19 239 1.9E-71 T 12-10-2018 BEN31_14175 8b022a93706517bb512e214f000dae25 443 Gene3D G3DSA:3.40.50.2020 58 246 6.7E-6 T 12-10-2018 BEN31_13210 b39ef026e34b022ea7d05e8c567f10b1 261 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 7.2E-12 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_13210 b39ef026e34b022ea7d05e8c567f10b1 261 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 7.2E-12 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_13210 b39ef026e34b022ea7d05e8c567f10b1 261 PRINTS PR01543 Arylamine N-acetyltransferase signature 102 127 7.2E-12 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_13210 b39ef026e34b022ea7d05e8c567f10b1 261 SUPERFAMILY SSF54001 6 258 2.7E-60 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_13210 b39ef026e34b022ea7d05e8c567f10b1 261 Pfam PF00797 N-acetyltransferase 24 259 2.3E-50 T 12-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 BEN31_13210 b39ef026e34b022ea7d05e8c567f10b1 261 Gene3D G3DSA:3.30.2140.20 1 259 4.1E-84 T 12-10-2018 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 SUPERFAMILY SSF144052 4 409 7.85E-152 T 12-10-2018 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 9.7E-75 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 Gene3D G3DSA:3.40.1830.10 1 179 3.2E-68 T 12-10-2018 IPR035097 Peptidase M29, N-terminal BEN31_09080 41dda1e4920f47b85340c1c4d83f0654 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 1.4E-176 T 12-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 BEN31_09035 be3f788ca9ba60f55e118836611423e9 259 Gene3D G3DSA:3.40.50.1000 4 247 1.7E-82 T 12-10-2018 IPR023214 HAD superfamily BEN31_09035 be3f788ca9ba60f55e118836611423e9 259 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 250 1.6E-61 T 12-10-2018 BEN31_09035 be3f788ca9ba60f55e118836611423e9 259 Gene3D G3DSA:3.30.1240.10 81 180 1.7E-82 T 12-10-2018 BEN31_09035 be3f788ca9ba60f55e118836611423e9 259 ProSitePatterns PS01229 Hypothetical cof family signature 2. 205 227 - T 12-10-2018 BEN31_09035 be3f788ca9ba60f55e118836611423e9 259 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 224 1.1E-25 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_09035 be3f788ca9ba60f55e118836611423e9 259 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 250 1.7E-64 T 12-10-2018 IPR000150 Cof family GO:0016787 BEN31_09035 be3f788ca9ba60f55e118836611423e9 259 SUPERFAMILY SSF56784 1 256 4.5E-70 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_07040 b0b222a61f58d355e8a12bef89908a6e 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN31_07040 b0b222a61f58d355e8a12bef89908a6e 475 SUPERFAMILY SSF53720 5 470 9.56E-153 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_07040 b0b222a61f58d355e8a12bef89908a6e 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN31_07040 b0b222a61f58d355e8a12bef89908a6e 475 Pfam PF00171 Aldehyde dehydrogenase family 13 469 1.0E-158 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_07040 b0b222a61f58d355e8a12bef89908a6e 475 Gene3D G3DSA:3.40.605.10 9 467 9.6E-161 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_07040 b0b222a61f58d355e8a12bef89908a6e 475 Gene3D G3DSA:3.40.309.10 249 439 9.6E-161 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_16445 84502e27dffefb44589619e493abfe27 368 Pfam PF08713 DNA alkylation repair enzyme 124 236 1.6E-4 T 12-10-2018 IPR014825 DNA alkylation repair enzyme BEN31_16445 84502e27dffefb44589619e493abfe27 368 SUPERFAMILY SSF48371 35 240 9.32E-47 T 12-10-2018 IPR016024 Armadillo-type fold BEN31_16445 84502e27dffefb44589619e493abfe27 368 Gene3D G3DSA:1.25.40.290 124 240 5.1E-38 T 12-10-2018 BEN31_05275 f09b1328a9e3115c3b9ae2bdef1b1961 240 Gene3D G3DSA:3.40.50.300 1 240 3.1E-81 T 12-10-2018 BEN31_05275 f09b1328a9e3115c3b9ae2bdef1b1961 240 PIRSF PIRSF039085 1 240 1.2E-112 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BEN31_05275 f09b1328a9e3115c3b9ae2bdef1b1961 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_05275 f09b1328a9e3115c3b9ae2bdef1b1961 240 Pfam PF00005 ABC transporter 17 165 1.7E-38 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_05275 f09b1328a9e3115c3b9ae2bdef1b1961 240 SMART SM00382 26 213 7.4E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_05275 f09b1328a9e3115c3b9ae2bdef1b1961 240 SUPERFAMILY SSF52540 1 235 4.28E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07485 63ca6b639afeea41999630a639515947 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 7.8E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07485 63ca6b639afeea41999630a639515947 192 Gene3D G3DSA:1.10.357.10 2 189 1.1E-46 T 12-10-2018 BEN31_07485 63ca6b639afeea41999630a639515947 192 SUPERFAMILY SSF46689 6 70 1.75E-17 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_07485 63ca6b639afeea41999630a639515947 192 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 58 190 2.4E-29 T 12-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal BEN31_07485 63ca6b639afeea41999630a639515947 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07485 63ca6b639afeea41999630a639515947 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.3E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_07485 63ca6b639afeea41999630a639515947 192 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_15945 89c5555bc3b5b7c87ba0f75ce9ea6bc8 48 Gene3D G3DSA:3.30.420.40 1 46 2.2E-5 T 12-10-2018 BEN31_15945 89c5555bc3b5b7c87ba0f75ce9ea6bc8 48 Pfam PF14174 YycC-like protein 1 46 5.1E-25 T 12-10-2018 IPR025550 YycC-like protein BEN31_18100 cc4a3a7f450e45648f2ff3ec40d3af40 871 SUPERFAMILY SSF53448 8 233 7.31E-45 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_18100 cc4a3a7f450e45648f2ff3ec40d3af40 871 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 504 855 1.6E-21 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 BEN31_18100 cc4a3a7f450e45648f2ff3ec40d3af40 871 Gene3D G3DSA:3.40.50.12580 665 858 2.0E-16 T 12-10-2018 BEN31_18100 cc4a3a7f450e45648f2ff3ec40d3af40 871 Gene3D G3DSA:3.90.550.10 4 254 4.9E-44 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_18100 cc4a3a7f450e45648f2ff3ec40d3af40 871 Pfam PF00535 Glycosyl transferase family 2 8 138 1.4E-31 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_16510 d5812bc8aa18172d81f0540f908e53dd 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 3.4E-61 T 12-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 BEN31_16510 d5812bc8aa18172d81f0540f908e53dd 393 Pfam PF07670 Nucleoside recognition 91 189 4.3E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN31_16510 d5812bc8aa18172d81f0540f908e53dd 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.6E-20 T 12-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 BEN31_16510 d5812bc8aa18172d81f0540f908e53dd 393 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 392 9.7E-139 T 12-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 297 320 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 Pfam PF00375 Sodium:dicarboxylate symporter family 7 402 2.7E-123 T 12-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 12-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 Gene3D G3DSA:1.10.3860.10 1 421 3.4E-134 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 3.8E-37 T 12-10-2018 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 3.8E-37 T 12-10-2018 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 3.8E-37 T 12-10-2018 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 3.8E-37 T 12-10-2018 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 3.8E-37 T 12-10-2018 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 3.8E-37 T 12-10-2018 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 3.8E-37 T 12-10-2018 BEN31_01010 d1ba23f53f1c9a970a96f23c4148d8a3 425 SUPERFAMILY SSF118215 6 403 1.11E-124 T 12-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 BEN31_18065 f07c7df060689c2207b26234c5aac72e 316 SUPERFAMILY SSF51182 4 315 2.13E-109 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_18065 f07c7df060689c2207b26234c5aac72e 316 PIRSF PIRSF036894 3 316 1.4E-133 T 12-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 BEN31_18065 f07c7df060689c2207b26234c5aac72e 316 Gene3D G3DSA:2.60.120.10 1 227 9.5E-98 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_18065 f07c7df060689c2207b26234c5aac72e 316 Pfam PF01238 Phosphomannose isomerase type I 8 315 2.3E-65 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BEN31_18065 f07c7df060689c2207b26234c5aac72e 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 102 315 3.2E-58 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BEN31_18065 f07c7df060689c2207b26234c5aac72e 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 6 104 2.3E-36 T 12-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 BEN31_18065 f07c7df060689c2207b26234c5aac72e 316 Gene3D G3DSA:2.60.120.10 228 316 8.3E-31 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 SUPERFAMILY SSF52540 325 569 8.54E-91 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 Pfam PF00005 ABC transporter 349 498 1.6E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 SUPERFAMILY SSF90123 3 316 6.28E-79 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 Pfam PF00664 ABC transporter transmembrane region 17 286 1.7E-59 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 Gene3D G3DSA:1.20.1560.10 1 315 2.4E-80 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 Gene3D G3DSA:3.40.50.300 329 570 3.0E-92 T 12-10-2018 BEN31_17415 800e00aaa8cf1f8bdc07055078367a05 571 SMART SM00382 358 544 7.7E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 PIRSF PIRSF000130 1 488 1.0E-210 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 SUPERFAMILY SSF51412 5 169 2.01E-31 T 12-10-2018 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 4.1E-167 T 12-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 SUPERFAMILY SSF51412 144 485 3.14E-125 T 12-10-2018 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 2.3E-205 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 SMART SM00116 98 148 2.7E-7 T 12-10-2018 IPR000644 CBS domain BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 SMART SM00116 161 209 1.4E-7 T 12-10-2018 IPR000644 CBS domain BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 12-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 SMART SM01240 9 474 0.0 T 12-10-2018 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 Gene3D G3DSA:3.20.20.70 1 487 2.0E-226 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 84.965 T 12-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 Pfam PF00571 CBS domain 153 204 1.0E-7 T 12-10-2018 IPR000644 CBS domain BEN31_15705 540fd071f6a442bbbeb7e0e1d4fe2ebd 488 Pfam PF00571 CBS domain 97 144 2.0E-7 T 12-10-2018 IPR000644 CBS domain BEN31_09485 e24fa40b897af171eb2c1da79012c562 212 Gene3D G3DSA:3.40.225.10 4 210 3.6E-49 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BEN31_09485 e24fa40b897af171eb2c1da79012c562 212 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 209 106.736 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BEN31_09485 e24fa40b897af171eb2c1da79012c562 212 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 198 7.6E-38 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BEN31_09485 e24fa40b897af171eb2c1da79012c562 212 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 12 203 1.8E-65 T 12-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 BEN31_09485 e24fa40b897af171eb2c1da79012c562 212 SUPERFAMILY SSF53639 8 206 7.46E-44 T 12-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily BEN31_09485 e24fa40b897af171eb2c1da79012c562 212 SMART SM01007 10 201 1.0E-45 T 12-10-2018 IPR001303 Class II aldolase/adducin N-terminal BEN31_09040 592021b25a3e2ed011820ee1bc22c253 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 68 7.0E-24 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 BEN31_09040 592021b25a3e2ed011820ee1bc22c253 69 Gene3D G3DSA:3.10.20.730 1 58 7.1E-27 T 12-10-2018 BEN31_09040 592021b25a3e2ed011820ee1bc22c253 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 1.5E-29 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 BEN31_09040 592021b25a3e2ed011820ee1bc22c253 69 Hamap MF_01553 UPF0356 protein . 1 69 21.852 T 12-10-2018 IPR009907 Protein of unknown function DUF1447 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 Pfam PF00355 Rieske [2Fe-2S] domain 429 504 1.6E-13 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 Gene3D G3DSA:2.102.10.10 400 509 1.3E-24 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 PRINTS PR00162 Rieske 2Fe-2S subunit signature 479 491 2.3E-8 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 PRINTS PR00162 Rieske 2Fe-2S subunit signature 458 469 2.3E-8 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 PRINTS PR00162 Rieske 2Fe-2S subunit signature 491 503 2.3E-8 T 12-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 SUPERFAMILY SSF51905 33 391 2.98E-33 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 Pfam PF01266 FAD dependent oxidoreductase 34 378 1.2E-42 T 12-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 Gene3D G3DSA:3.50.50.60 34 380 9.0E-48 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 Gene3D G3DSA:3.30.9.10 127 338 9.0E-48 T 12-10-2018 BEN31_10805 77568342141a9d51a69bedeff358b8a4 510 SUPERFAMILY SSF50022 427 505 2.88E-25 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN31_16750 3a6926054d6b9889e23771d3eb045c61 297 SUPERFAMILY SSF54593 177 279 6.79E-16 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_16750 3a6926054d6b9889e23771d3eb045c61 297 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 122 3.2E-12 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_16750 3a6926054d6b9889e23771d3eb045c61 297 Gene3D G3DSA:3.10.180.10 168 289 8.8E-13 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_16750 3a6926054d6b9889e23771d3eb045c61 297 Gene3D G3DSA:3.10.180.10 7 135 9.1E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_16750 3a6926054d6b9889e23771d3eb045c61 297 SUPERFAMILY SSF54593 7 168 1.06E-35 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 SUPERFAMILY SSF55979 133 251 1.65E-28 T 12-10-2018 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 136 251 4.0E-40 T 12-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 1.6E-135 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 1.3E-39 T 12-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 SMART SM00480 17 373 7.5E-180 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 SUPERFAMILY SSF55979 1 127 6.28E-23 T 12-10-2018 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 PIRSF PIRSF000804 1 378 9.6E-121 T 12-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 Gene3D G3DSA:3.10.150.10 1 250 1.6E-142 T 12-10-2018 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 Gene3D G3DSA:3.70.10.10 145 375 1.6E-142 T 12-10-2018 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 SUPERFAMILY SSF55979 254 377 4.85E-32 T 12-10-2018 BEN31_15765 b3bbc06960acc479235c2989df7a8988 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 1.4E-40 T 12-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 BEN31_06025 53567380d3d62be0c8f8307898d7bcab 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 1.3E-23 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BEN31_06025 53567380d3d62be0c8f8307898d7bcab 290 PIRSF PIRSF006483 2 283 6.0E-99 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_06025 53567380d3d62be0c8f8307898d7bcab 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 10 215 2.3E-64 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_06025 53567380d3d62be0c8f8307898d7bcab 290 Gene3D G3DSA:3.30.70.120 193 268 2.3E-27 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_09985 b1954a0104f9697fe4666e1957091100 385 Gene3D G3DSA:1.20.1250.20 191 382 5.6E-16 T 12-10-2018 BEN31_09985 b1954a0104f9697fe4666e1957091100 385 Gene3D G3DSA:1.20.1250.20 2 189 4.3E-17 T 12-10-2018 BEN31_09985 b1954a0104f9697fe4666e1957091100 385 Pfam PF07690 Major Facilitator Superfamily 23 193 1.7E-13 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_09985 b1954a0104f9697fe4666e1957091100 385 SUPERFAMILY SSF103473 4 374 2.75E-44 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 17 557 3.2E-268 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 557 47.98 T 12-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 SUPERFAMILY SSF52016 377 556 1.49E-62 T 12-10-2018 BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 Pfam PF00920 Dehydratase family 34 553 3.2E-230 T 12-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 Gene3D G3DSA:3.50.30.80 377 528 8.6E-54 T 12-10-2018 BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 SUPERFAMILY SSF143975 3 376 3.66E-142 T 12-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN31_06315 d11805bde17d6b1341f1bfcd3346984b 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 12-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 BEN31_03670 0fd6a93ccf6c555efeaa3dd9db77cc86 335 SUPERFAMILY SSF116965 89 292 5.49E-8 T 12-10-2018 BEN31_03670 0fd6a93ccf6c555efeaa3dd9db77cc86 335 SUPERFAMILY SSF48452 14 122 1.04E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_03670 0fd6a93ccf6c555efeaa3dd9db77cc86 335 Gene3D G3DSA:1.25.40.10 17 132 2.0E-11 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_03670 0fd6a93ccf6c555efeaa3dd9db77cc86 335 Pfam PF14559 Tetratricopeptide repeat 27 81 8.6E-9 T 12-10-2018 BEN31_12520 649151384620b6ec9c5183454ade3abe 399 SUPERFAMILY SSF103473 3 397 5.89E-31 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_12520 649151384620b6ec9c5183454ade3abe 399 Gene3D G3DSA:1.20.1250.20 1 398 1.5E-27 T 12-10-2018 BEN31_12520 649151384620b6ec9c5183454ade3abe 399 Pfam PF07690 Major Facilitator Superfamily 12 338 1.1E-10 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 Gene3D G3DSA:3.40.50.720 128 273 1.0E-109 T 12-10-2018 BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 Pfam PF13602 Zinc-binding dehydrogenase 191 332 3.1E-18 T 12-10-2018 BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 9.5E-7 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 SUPERFAMILY SSF51735 117 285 8.15E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 Gene3D G3DSA:3.90.180.10 25 331 1.0E-109 T 12-10-2018 BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 SMART SM00829 5 332 3.7E-12 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 SUPERFAMILY SSF50129 14 143 3.65E-32 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_11810 2a3fe4ea9593e765aa201bd1037ddb00 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 335 8.8E-138 T 12-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 BEN31_17085 578cbb5651b220fd3945346aff086c19 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 331 2.6E-117 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BEN31_17085 578cbb5651b220fd3945346aff086c19 334 Gene3D G3DSA:3.20.20.30 1 334 2.7E-101 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_17085 578cbb5651b220fd3945346aff086c19 334 Pfam PF00296 Luciferase-like monooxygenase 15 303 8.8E-42 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BEN31_17085 578cbb5651b220fd3945346aff086c19 334 SUPERFAMILY SSF51679 2 330 1.15E-75 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_05330 8da86ba2919863cdaea3c63ef5f6a127 294 SUPERFAMILY SSF103481 48 150 3.01E-8 T 12-10-2018 BEN31_05330 8da86ba2919863cdaea3c63ef5f6a127 294 SUPERFAMILY SSF103481 200 292 2.09E-5 T 12-10-2018 BEN31_05330 8da86ba2919863cdaea3c63ef5f6a127 294 Pfam PF06800 Sugar transport protein 16 292 5.2E-94 T 12-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Pfam PF14490 Helix-hairpin-helix containing domain 157 248 1.6E-30 T 12-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 SUPERFAMILY SSF52540 340 734 1.4E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 16 753 1.1E-261 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Gene3D G3DSA:1.10.10.2220 199 296 2.1E-16 T 12-10-2018 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 13 760 29.65 T 12-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Pfam PF13538 UvrD-like helicase C-terminal domain 680 728 1.1E-17 T 12-10-2018 IPR027785 UvrD-like helicase C-terminal domain BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Gene3D G3DSA:2.30.30.940 602 681 1.4E-140 T 12-10-2018 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Gene3D G3DSA:1.10.150.20 93 158 2.8E-5 T 12-10-2018 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Gene3D G3DSA:3.40.50.300 337 750 1.4E-140 T 12-10-2018 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Pfam PF13604 AAA domain 345 553 4.4E-51 T 12-10-2018 BEN31_04040 6a15a07e38163632d535337c73df5c9a 794 Gene3D G3DSA:3.40.50.300 516 744 1.4E-140 T 12-10-2018 BEN31_07760 191dae8b0687658662a4763408b4ef64 144 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 4.4E-23 T 12-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA BEN31_07760 191dae8b0687658662a4763408b4ef64 144 SUPERFAMILY SSF158622 4 123 1.44E-35 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BEN31_07760 191dae8b0687658662a4763408b4ef64 144 Gene3D G3DSA:1.20.1500.10 1 124 7.8E-38 T 12-10-2018 IPR023378 YheA/YmcA-like domain superfamily BEN31_07760 191dae8b0687658662a4763408b4ef64 144 PIRSF PIRSF021287 1 123 1.1E-51 T 12-10-2018 IPR016783 Biofilm formation YmcA BEN31_18020 dd6ac8afd082bbd7be422add0f50cd3f 338 SUPERFAMILY SSF53613 4 312 4.99E-84 T 12-10-2018 IPR029056 Ribokinase-like BEN31_18020 dd6ac8afd082bbd7be422add0f50cd3f 338 Gene3D G3DSA:3.40.1190.20 5 317 2.5E-92 T 12-10-2018 IPR029056 Ribokinase-like BEN31_18020 dd6ac8afd082bbd7be422add0f50cd3f 338 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN31_18020 dd6ac8afd082bbd7be422add0f50cd3f 338 Pfam PF00294 pfkB family carbohydrate kinase 6 304 2.3E-67 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BEN31_08170 1711be70853ec556644b7c96d5a365c7 440 Pfam PF02120 Flagellar hook-length control protein FliK 319 393 1.8E-18 T 12-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal BEN31_08170 1711be70853ec556644b7c96d5a365c7 440 Gene3D G3DSA:3.30.750.140 285 413 1.9E-10 T 12-10-2018 IPR038610 FliK-like, C-terminal domain superfamily BEN31_07335 610ab81c6e0409415efbd3892163165e 137 SMART SM00881 13 105 3.8E-20 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BEN31_07335 610ab81c6e0409415efbd3892163165e 137 SUPERFAMILY SSF51735 7 134 4.93E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07335 610ab81c6e0409415efbd3892163165e 137 Pfam PF13380 CoA binding domain 17 131 8.8E-36 T 12-10-2018 IPR003781 CoA-binding GO:0048037 BEN31_07335 610ab81c6e0409415efbd3892163165e 137 Gene3D G3DSA:3.40.50.720 1 137 2.8E-39 T 12-10-2018 BEN31_17295 b3740dbf7cc4694bdef858eedbbea427 133 Pfam PF16888 Domain of unknown function (DUF5082) 14 120 2.2E-12 T 12-10-2018 IPR031681 Protein of unknown function DUF5082 BEN31_17295 b3740dbf7cc4694bdef858eedbbea427 133 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 11 115 4.0E-21 T 12-10-2018 BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 SMART SM00448 3 113 1.6E-48 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 SMART SM00862 153 229 5.1E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 9.4E-28 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 Pfam PF00072 Response regulator receiver domain 5 114 1.8E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 SUPERFAMILY SSF46894 129 230 8.32E-32 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 Gene3D G3DSA:3.40.50.2300 1 131 4.4E-41 T 12-10-2018 BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 Gene3D G3DSA:1.10.10.10 132 235 3.5E-42 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16070 3e585951ad3b7c8f69fd5898a72d9783 235 SUPERFAMILY SSF52172 2 127 1.85E-44 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_05610 acca430fb8cb49aa96df64fabccc92ed 294 Pfam PF06207 Protein of unknown function (DUF1002) 36 254 3.7E-77 T 12-10-2018 IPR009343 Protein of unknown function DUF1002 BEN31_04385 dbb5cdac5dfcc4c7e492169bba5ace66 111 SUPERFAMILY SSF55811 5 99 8.26E-25 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN31_04385 dbb5cdac5dfcc4c7e492169bba5ace66 111 Gene3D G3DSA:3.90.79.10 2 105 4.1E-24 T 12-10-2018 BEN31_04385 dbb5cdac5dfcc4c7e492169bba5ace66 111 PRINTS PR00502 NUDIX hydrolase family signature 42 57 1.1E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN31_04385 dbb5cdac5dfcc4c7e492169bba5ace66 111 PRINTS PR00502 NUDIX hydrolase family signature 28 42 1.1E-7 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN31_04385 dbb5cdac5dfcc4c7e492169bba5ace66 111 ProSitePatterns PS00893 Nudix box signature. 33 54 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN31_04385 dbb5cdac5dfcc4c7e492169bba5ace66 111 Pfam PF00293 NUDIX domain 3 91 3.4E-17 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN31_12510 6beffc2c035f2982c1ededa0d270f3f6 513 Gene3D G3DSA:3.40.710.10 35 369 3.9E-83 T 12-10-2018 BEN31_12510 6beffc2c035f2982c1ededa0d270f3f6 513 SUPERFAMILY SSF56601 35 367 5.79E-70 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_12510 6beffc2c035f2982c1ededa0d270f3f6 513 Pfam PF00144 Beta-lactamase 37 359 3.1E-61 T 12-10-2018 IPR001466 Beta-lactamase-related BEN31_17195 1155a0008957d4e98d83ed6bc1b6c98c 392 Gene3D G3DSA:3.90.1150.10 258 391 1.7E-37 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_17195 1155a0008957d4e98d83ed6bc1b6c98c 392 Gene3D G3DSA:3.40.640.10 1 257 6.6E-106 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_17195 1155a0008957d4e98d83ed6bc1b6c98c 392 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 381 1.0E-142 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN31_17195 1155a0008957d4e98d83ed6bc1b6c98c 392 PIRSF PIRSF000390 5 389 2.8E-121 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN31_17195 1155a0008957d4e98d83ed6bc1b6c98c 392 SUPERFAMILY SSF53383 9 386 6.05E-126 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_14035 7b9d57b5966471b15ca5ce48c0bb9544 257 Gene3D G3DSA:3.40.50.150 24 257 1.3E-65 T 12-10-2018 BEN31_14035 7b9d57b5966471b15ca5ce48c0bb9544 257 Pfam PF13847 Methyltransferase domain 42 176 7.1E-25 T 12-10-2018 IPR025714 Methyltransferase domain BEN31_14035 7b9d57b5966471b15ca5ce48c0bb9544 257 SUPERFAMILY SSF53335 8 209 1.56E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_13370 354fbf01cef2b440c2b198f44334417d 201 Pfam PF01694 Rhomboid family 54 191 6.8E-38 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BEN31_13370 354fbf01cef2b440c2b198f44334417d 201 SUPERFAMILY SSF144091 12 199 3.66E-40 T 12-10-2018 BEN31_13370 354fbf01cef2b440c2b198f44334417d 201 Gene3D G3DSA:1.20.1540.10 8 199 7.1E-40 T 12-10-2018 IPR035952 Rhomboid-like superfamily BEN31_09140 7de5acf65fdd6f3bbd96bd4c54308f91 77 SUPERFAMILY SSF54285 2 77 2.62E-15 T 12-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp BEN31_09140 7de5acf65fdd6f3bbd96bd4c54308f91 77 Gene3D G3DSA:3.10.20.30 1 77 2.3E-19 T 12-10-2018 IPR012675 Beta-grasp domain superfamily BEN31_09140 7de5acf65fdd6f3bbd96bd4c54308f91 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 1.3E-21 T 12-10-2018 BEN31_09140 7de5acf65fdd6f3bbd96bd4c54308f91 77 Pfam PF02597 ThiS family 4 77 1.4E-16 T 12-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 BEN31_01560 703dc04e233563d0688b7161bb480c2b 78 SUPERFAMILY SSF117916 2 77 4.74E-27 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN31_01560 703dc04e233563d0688b7161bb480c2b 78 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 65 2.0E-22 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BEN31_01560 703dc04e233563d0688b7161bb480c2b 78 Gene3D G3DSA:3.30.300.130 1 78 9.0E-33 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN31_01560 703dc04e233563d0688b7161bb480c2b 78 Pfam PF01106 NifU-like domain 10 75 5.6E-28 T 12-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 BEN31_17285 b45c34a2bb5b4e43a9dd43e984188904 256 Pfam PF06778 Chlorite dismutase 39 245 1.3E-76 T 12-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase BEN31_17285 b45c34a2bb5b4e43a9dd43e984188904 256 Hamap MF_01442 Putative heme-dependent peroxidase . 7 256 56.514 T 12-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family BEN31_17285 b45c34a2bb5b4e43a9dd43e984188904 256 Gene3D G3DSA:3.30.70.1100 131 256 6.1E-55 T 12-10-2018 BEN31_17285 b45c34a2bb5b4e43a9dd43e984188904 256 Gene3D G3DSA:3.30.70.1030 3 123 3.7E-46 T 12-10-2018 BEN31_17285 b45c34a2bb5b4e43a9dd43e984188904 256 SUPERFAMILY SSF54909 7 255 6.97E-94 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_10755 924238651441b7ffca8942c9c38cbc39 316 Pfam PF01032 FecCD transport family 32 310 2.4E-57 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_10755 924238651441b7ffca8942c9c38cbc39 316 Gene3D G3DSA:1.10.3470.10 3 315 6.3E-59 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_10755 924238651441b7ffca8942c9c38cbc39 316 SUPERFAMILY SSF81345 5 310 3.01E-58 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_13030 f7b0c56fc350066814ce1e1324b234a0 183 Gene3D G3DSA:3.40.630.30 14 179 9.7E-37 T 12-10-2018 BEN31_13030 f7b0c56fc350066814ce1e1324b234a0 183 Pfam PF00583 Acetyltransferase (GNAT) family 54 153 4.1E-15 T 12-10-2018 IPR000182 GNAT domain BEN31_13030 f7b0c56fc350066814ce1e1324b234a0 183 SUPERFAMILY SSF55729 14 181 8.23E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_17615 1e558fd58164396b2580d49f1186970e 173 Pfam PF00430 ATP synthase B/B' CF(0) 21 150 5.9E-38 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BEN31_17615 1e558fd58164396b2580d49f1186970e 173 Hamap MF_01398 ATP synthase subunit b [atpF]. 14 151 13.341 T 12-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 BEN31_17615 1e558fd58164396b2580d49f1186970e 173 SUPERFAMILY SSF81573 77 134 2.09E-9 T 12-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily BEN31_17615 1e558fd58164396b2580d49f1186970e 173 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 23 168 2.0E-45 T 12-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 BEN31_05135 5e3a2fd51afdc31ad119257e56d938ee 131 SUPERFAMILY SSF48013 2 127 6.28E-41 T 12-10-2018 IPR035926 NusB-like superfamily BEN31_05135 5e3a2fd51afdc31ad119257e56d938ee 131 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 129 24.942 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 BEN31_05135 5e3a2fd51afdc31ad119257e56d938ee 131 Gene3D G3DSA:1.10.940.10 1 131 1.4E-45 T 12-10-2018 IPR035926 NusB-like superfamily BEN31_05135 5e3a2fd51afdc31ad119257e56d938ee 131 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 127 4.8E-44 T 12-10-2018 IPR011605 NusB antitermination factor GO:0006353 BEN31_05135 5e3a2fd51afdc31ad119257e56d938ee 131 Pfam PF01029 NusB family 4 125 2.5E-40 T 12-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 BEN31_17690 8c13db72824da29cdc34ab3042f2e1b7 262 Pfam PF02634 FdhD/NarQ family 27 260 2.0E-77 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN31_17690 8c13db72824da29cdc34ab3042f2e1b7 262 SUPERFAMILY SSF53927 7 260 3.91E-77 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_17690 8c13db72824da29cdc34ab3042f2e1b7 262 Gene3D G3DSA:3.10.20.10 29 111 2.0E-13 T 12-10-2018 BEN31_17690 8c13db72824da29cdc34ab3042f2e1b7 262 Gene3D G3DSA:3.40.140.10 116 262 2.2E-49 T 12-10-2018 BEN31_17690 8c13db72824da29cdc34ab3042f2e1b7 262 PIRSF PIRSF015626 1 262 1.1E-80 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN31_17690 8c13db72824da29cdc34ab3042f2e1b7 262 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 261 1.1E-84 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN31_17690 8c13db72824da29cdc34ab3042f2e1b7 262 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 261 31.105 T 12-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 BEN31_08325 76db54e0262d91174e6516351660f48a 328 SMART SM00382 119 297 3.0E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_08325 76db54e0262d91174e6516351660f48a 328 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 46 321 65.946 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BEN31_08325 76db54e0262d91174e6516351660f48a 328 Pfam PF00448 SRP54-type protein, GTPase domain 121 320 9.0E-81 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08325 76db54e0262d91174e6516351660f48a 328 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 294 307 - T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08325 76db54e0262d91174e6516351660f48a 328 SUPERFAMILY SSF52540 119 320 1.45E-51 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08325 76db54e0262d91174e6516351660f48a 328 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 320 1.3E-119 T 12-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 BEN31_08325 76db54e0262d91174e6516351660f48a 328 Gene3D G3DSA:1.20.120.140 20 318 1.7E-114 T 12-10-2018 BEN31_08325 76db54e0262d91174e6516351660f48a 328 SUPERFAMILY SSF47364 18 96 3.4E-21 T 12-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 BEN31_08325 76db54e0262d91174e6516351660f48a 328 Pfam PF02881 SRP54-type protein, helical bundle domain 34 99 9.1E-15 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08325 76db54e0262d91174e6516351660f48a 328 SMART SM00962 120 321 5.6E-121 T 12-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08325 76db54e0262d91174e6516351660f48a 328 SMART SM00963 22 103 3.9E-26 T 12-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 BEN31_08325 76db54e0262d91174e6516351660f48a 328 Gene3D G3DSA:3.40.50.300 112 309 1.7E-114 T 12-10-2018 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 Gene3D G3DSA:3.40.190.10 8 184 2.0E-51 T 12-10-2018 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 Pfam PF00800 Prephenate dehydratase 6 188 5.1E-56 T 12-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 SUPERFAMILY SSF55021 196 284 5.29E-24 T 12-10-2018 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 Gene3D G3DSA:3.30.70.260 197 290 1.6E-26 T 12-10-2018 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 Pfam PF01842 ACT domain 214 263 8.0E-7 T 12-10-2018 IPR002912 ACT domain BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 Gene3D G3DSA:3.40.190.10 87 176 2.0E-51 T 12-10-2018 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 PIRSF PIRSF001500 1 288 2.1E-69 T 12-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 233 240 - T 12-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 BEN31_03845 71ebd13a758ad29cf19bd6b44d7dc38f 292 SUPERFAMILY SSF53850 5 189 2.79E-52 T 12-10-2018 BEN31_03795 b9888fc7066e1723bae4e6318e1dabd1 227 Gene3D G3DSA:2.160.20.70 102 225 1.0E-36 T 12-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 BEN31_03795 b9888fc7066e1723bae4e6318e1dabd1 227 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 8 210 6.0E-41 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BEN31_03795 b9888fc7066e1723bae4e6318e1dabd1 227 Gene3D G3DSA:3.30.160.540 7 88 2.8E-26 T 12-10-2018 BEN31_03795 b9888fc7066e1723bae4e6318e1dabd1 227 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 211 21.716 T 12-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 BEN31_03795 b9888fc7066e1723bae4e6318e1dabd1 227 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 109 206 2.2E-31 T 12-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 BEN31_03795 b9888fc7066e1723bae4e6318e1dabd1 227 SUPERFAMILY SSF63848 108 211 1.27E-29 T 12-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 BEN31_00510 5293c226e12a11cce4cade077c53bfb5 392 Gene3D G3DSA:3.40.640.10 1 251 2.9E-86 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_00510 5293c226e12a11cce4cade077c53bfb5 392 SUPERFAMILY SSF53383 6 380 4.71E-105 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_00510 5293c226e12a11cce4cade077c53bfb5 392 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 19 376 4.6E-100 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN31_00510 5293c226e12a11cce4cade077c53bfb5 392 Gene3D G3DSA:3.90.1150.10 253 389 4.3E-42 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_00510 5293c226e12a11cce4cade077c53bfb5 392 PIRSF PIRSF000390 2 383 2.6E-108 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN31_09180 1cf79e1ddbee5b40868964bcc8970653 152 Gene3D G3DSA:3.40.30.10 1 148 9.1E-40 T 12-10-2018 BEN31_09180 1cf79e1ddbee5b40868964bcc8970653 152 Pfam PF00578 AhpC/TSA family 5 125 1.2E-13 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_09180 1cf79e1ddbee5b40868964bcc8970653 152 SUPERFAMILY SSF52833 2 141 3.98E-33 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_16185 1af8639c95ba8e46a059bd078bf6bd8f 245 PIRSF PIRSF006648 1 241 1.6E-21 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BEN31_16185 1af8639c95ba8e46a059bd078bf6bd8f 245 PRINTS PR00164 ABC-2 type transport system membrane protein signature 185 204 8.2E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BEN31_16185 1af8639c95ba8e46a059bd078bf6bd8f 245 PRINTS PR00164 ABC-2 type transport system membrane protein signature 128 152 8.2E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BEN31_16185 1af8639c95ba8e46a059bd078bf6bd8f 245 PRINTS PR00164 ABC-2 type transport system membrane protein signature 165 184 8.2E-7 T 12-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 BEN31_16185 1af8639c95ba8e46a059bd078bf6bd8f 245 Pfam PF01061 ABC-2 type transporter 6 207 2.6E-27 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BEN31_16025 31ec7d5cd920431ddc88a031099a04cf 193 Gene3D G3DSA:1.10.357.10 7 190 4.3E-40 T 12-10-2018 BEN31_16025 31ec7d5cd920431ddc88a031099a04cf 193 Pfam PF14278 Transcriptional regulator C-terminal region 96 172 1.3E-8 T 12-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type BEN31_16025 31ec7d5cd920431ddc88a031099a04cf 193 SUPERFAMILY SSF46689 9 72 5.99E-15 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_16025 31ec7d5cd920431ddc88a031099a04cf 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 63 1.7E-4 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_09425 b776c40f52a02d43a87e4ac5851f044f 165 SUPERFAMILY SSF55620 28 136 1.19E-28 T 12-10-2018 BEN31_09425 b776c40f52a02d43a87e4ac5851f044f 165 PIRSF PIRSF027377 9 147 9.4E-61 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN31_09425 b776c40f52a02d43a87e4ac5851f044f 165 Gene3D G3DSA:3.30.1130.10 21 165 6.8E-68 T 12-10-2018 BEN31_09425 b776c40f52a02d43a87e4ac5851f044f 165 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 165 71.593 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN31_09425 b776c40f52a02d43a87e4ac5851f044f 165 Pfam PF14489 QueF-like protein 62 140 4.1E-35 T 12-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN31_09425 b776c40f52a02d43a87e4ac5851f044f 165 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 28 139 3.6E-54 T 12-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 BEN31_08310 b6de24bcbc0735a3c445f989fb3e4694 90 Gene3D G3DSA:3.30.1320.10 1 90 1.3E-36 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08310 b6de24bcbc0735a3c445f989fb3e4694 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.71 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08310 b6de24bcbc0735a3c445f989fb3e4694 90 Pfam PF00886 Ribosomal protein S16 9 67 3.3E-25 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08310 b6de24bcbc0735a3c445f989fb3e4694 90 SUPERFAMILY SSF54565 2 86 4.32E-34 T 12-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_08310 b6de24bcbc0735a3c445f989fb3e4694 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 5.3E-35 T 12-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_12135 a91098cc9cab861f0adcfcf19b7213e9 89 Gene3D G3DSA:3.30.70.100 1 89 4.0E-29 T 12-10-2018 BEN31_12135 a91098cc9cab861f0adcfcf19b7213e9 89 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BEN31_12135 a91098cc9cab861f0adcfcf19b7213e9 89 Pfam PF00708 Acylphosphatase 4 88 3.1E-26 T 12-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BEN31_12135 a91098cc9cab861f0adcfcf19b7213e9 89 PRINTS PR00112 Acylphosphatase signature 3 18 2.7E-6 T 12-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BEN31_12135 a91098cc9cab861f0adcfcf19b7213e9 89 PRINTS PR00112 Acylphosphatase signature 24 49 2.7E-6 T 12-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BEN31_12135 a91098cc9cab861f0adcfcf19b7213e9 89 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 12-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BEN31_12135 a91098cc9cab861f0adcfcf19b7213e9 89 SUPERFAMILY SSF54975 2 89 2.18E-26 T 12-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 BEN31_09255 512016492771115c972c0dcd17c4623e 298 Pfam PF05067 Manganese containing catalase 3 296 9.6E-95 T 12-10-2018 IPR007760 Manganese catalase BEN31_09255 512016492771115c972c0dcd17c4623e 298 Gene3D G3DSA:1.20.1260.130 2 297 8.9E-109 T 12-10-2018 BEN31_09255 512016492771115c972c0dcd17c4623e 298 SUPERFAMILY SSF47240 1 293 6.08E-97 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_02100 acf39d39c8a18474a5df0f04511a48d9 437 Gene3D G3DSA:3.40.50.300 8 235 2.9E-57 T 12-10-2018 BEN31_02100 acf39d39c8a18474a5df0f04511a48d9 437 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 22 421 9.2E-99 T 12-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 BEN31_02100 acf39d39c8a18474a5df0f04511a48d9 437 Gene3D G3DSA:3.30.420.280 241 418 1.4E-32 T 12-10-2018 BEN31_02100 acf39d39c8a18474a5df0f04511a48d9 437 Pfam PF04466 Phage terminase large subunit 21 233 2.0E-77 T 12-10-2018 IPR035412 Phage terminase large subunit, N-terminal BEN31_02100 acf39d39c8a18474a5df0f04511a48d9 437 Pfam PF17288 Terminase RNAseH like domain 271 413 1.9E-40 T 12-10-2018 IPR035413 Phage terminase large subunit, C-terminal BEN31_13765 88a911711714ffcff39621a052de575e 281 SMART SM00065 12 159 1.0E-6 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_13765 88a911711714ffcff39621a052de575e 281 Gene3D G3DSA:3.30.450.40 4 161 3.2E-16 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_13765 88a911711714ffcff39621a052de575e 281 SUPERFAMILY SSF52091 166 273 6.47E-12 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13765 88a911711714ffcff39621a052de575e 281 Gene3D G3DSA:3.30.750.24 162 276 4.4E-28 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13765 88a911711714ffcff39621a052de575e 281 SUPERFAMILY SSF55781 13 161 6.32E-20 T 12-10-2018 BEN31_13765 88a911711714ffcff39621a052de575e 281 Pfam PF13185 GAF domain 14 150 8.3E-9 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 Gene3D G3DSA:3.40.50.790 68 159 2.6E-85 T 12-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.714 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 PIRSF PIRSF002155 1 227 3.9E-81 T 12-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 SUPERFAMILY SSF56808 6 226 5.23E-85 T 12-10-2018 IPR023674 Ribosomal protein L1-like BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 8.0E-57 T 12-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 12-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 Gene3D G3DSA:3.30.190.20 21 225 2.6E-85 T 12-10-2018 BEN31_15110 dd667496dbcc1c5a8b31cef693b185b6 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.2E-107 T 12-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 BEN31_17375 cc88e8d368e19c7b2d1e5fb3d25ed6d1 689 Pfam PF00912 Transglycosylase 71 239 1.8E-64 T 12-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_17375 cc88e8d368e19c7b2d1e5fb3d25ed6d1 689 SUPERFAMILY SSF56601 220 662 3.3E-114 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_17375 cc88e8d368e19c7b2d1e5fb3d25ed6d1 689 Pfam PF00905 Penicillin binding protein transpeptidase domain 331 575 2.0E-29 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_17375 cc88e8d368e19c7b2d1e5fb3d25ed6d1 689 Gene3D G3DSA:3.40.710.10 262 669 1.0E-111 T 12-10-2018 BEN31_17375 cc88e8d368e19c7b2d1e5fb3d25ed6d1 689 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 74 613 3.4E-179 T 12-10-2018 BEN31_17375 cc88e8d368e19c7b2d1e5fb3d25ed6d1 689 Gene3D G3DSA:1.10.3810.10 66 261 6.6E-77 T 12-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_17375 cc88e8d368e19c7b2d1e5fb3d25ed6d1 689 SUPERFAMILY SSF53955 51 265 2.08E-76 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BEN31_02960 0f708d017dd64e8d8311106416622a98 187 Gene3D G3DSA:3.40.50.850 1 185 5.3E-56 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_02960 0f708d017dd64e8d8311106416622a98 187 Pfam PF00857 Isochorismatase family 7 179 9.9E-35 T 12-10-2018 IPR000868 Isochorismatase-like GO:0003824 BEN31_02960 0f708d017dd64e8d8311106416622a98 187 SUPERFAMILY SSF52499 4 184 6.8E-47 T 12-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 Gene3D G3DSA:3.40.50.200 93 365 4.5E-104 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 154 164 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 SUPERFAMILY SSF52743 93 364 4.45E-92 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 309 319 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 Pfam PF00082 Subtilase family 113 356 7.4E-54 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 118 129 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 SUPERFAMILY SSF54897 24 88 1.96E-9 T 12-10-2018 BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 PRINTS PR00723 Subtilisin serine protease family (S8) signature 308 324 5.6E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 PRINTS PR00723 Subtilisin serine protease family (S8) signature 150 163 5.6E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 PRINTS PR00723 Subtilisin serine protease family (S8) signature 113 132 5.6E-21 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_05515 4d8cb39a749e5e6a31a132d4638f0b53 365 Gene3D G3DSA:3.30.70.80 16 92 6.8E-12 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 Gene3D G3DSA:3.50.50.60 7 294 9.0E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.2E-12 T 12-10-2018 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 1.2E-12 T 12-10-2018 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.2E-12 T 12-10-2018 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-12 T 12-10-2018 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 Gene3D G3DSA:3.50.50.60 131 249 9.0E-57 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 178 1.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 119 127 1.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 244 265 1.6E-18 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 290 7.9E-107 T 12-10-2018 BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 SUPERFAMILY SSF51905 5 321 6.12E-42 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05795 29fefe6b231442e9cc344610b3b47018 323 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 6 319 5.9E-142 T 12-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA BEN31_03965 d0dbca6f731caed28b6f18643567dbeb 117 Pfam PF06305 Lipopolysaccharide assembly protein A domain 25 80 3.5E-14 T 12-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 BEN31_01630 2bda799508904e330edd013b091d4c13 158 Pfam PF02681 Divergent PAP2 family 6 148 2.9E-50 T 12-10-2018 IPR003832 Protein of unknown function DUF212 BEN31_05520 1141525b32d2886eb94e3be10b12060e 215 PIRSF PIRSF038973 1 214 1.0E-66 T 12-10-2018 IPR014196 Stage II sporulation protein M BEN31_05520 1141525b32d2886eb94e3be10b12060e 215 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 9 207 6.9E-75 T 12-10-2018 IPR014196 Stage II sporulation protein M BEN31_05520 1141525b32d2886eb94e3be10b12060e 215 Pfam PF01944 Stage II sporulation protein M 25 202 1.2E-25 T 12-10-2018 IPR002798 Stage II sporulation protein M-like BEN31_16530 665f35a7c08a64c8add72b3c63731f36 97 SUPERFAMILY SSF54909 1 92 6.9E-27 T 12-10-2018 IPR011008 Dimeric alpha-beta barrel BEN31_16530 665f35a7c08a64c8add72b3c63731f36 97 Gene3D G3DSA:3.30.70.100 2 96 9.6E-27 T 12-10-2018 BEN31_16530 665f35a7c08a64c8add72b3c63731f36 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 8.5E-19 T 12-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain BEN31_02515 50eff5db417e2add9757f9ff94e1b5da 48 Pfam PF12606 Tumour necrosis factor receptor superfamily member 19 1 42 5.0E-9 T 12-10-2018 IPR022248 TNF receptor family, RELT BEN31_07055 66a65d8bfad7f4be9223477278fdb806 161 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 138 3.7E-28 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 Pfam PF00119 ATP synthase A chain 20 237 4.8E-59 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 12-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 PRINTS PR00123 ATP synthase A subunit signature 78 94 1.2E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 PRINTS PR00123 ATP synthase A subunit signature 146 161 1.2E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 PRINTS PR00123 ATP synthase A subunit signature 223 238 1.2E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 PRINTS PR00123 ATP synthase A subunit signature 162 184 1.2E-18 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 SUPERFAMILY SSF81336 72 237 5.1E-42 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 Gene3D G3DSA:1.20.120.220 70 244 2.8E-42 T 12-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 11 239 3.1E-53 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_17605 ba5536e2c7be5098657009f2bf149457 244 Hamap MF_01393 ATP synthase subunit a [atpB]. 8 243 14.176 T 12-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 BEN31_07785 5a68bf2c290deb14a8756926776a8fe2 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 4.7E-40 T 12-10-2018 IPR007347 Sporulation stage V, protein S BEN31_07785 5a68bf2c290deb14a8756926776a8fe2 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 3.0E-32 T 12-10-2018 IPR007347 Sporulation stage V, protein S BEN31_07785 5a68bf2c290deb14a8756926776a8fe2 86 Gene3D G3DSA:3.30.110.20 1 86 5.1E-36 T 12-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 BEN31_05335 916c7ae02827254e05e4814842aff750 261 Gene3D G3DSA:3.40.50.720 1 261 7.9E-87 T 12-10-2018 BEN31_05335 916c7ae02827254e05e4814842aff750 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 SUPERFAMILY SSF51735 6 251 1.63E-84 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 5.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 5.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 5.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 5.9E-41 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_05335 916c7ae02827254e05e4814842aff750 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 1.8E-70 T 12-10-2018 BEN31_06750 f6dc01055d7cdf735f1259739f761ccc 535 Pfam PF07081 Protein of unknown function (DUF1349) 377 532 1.8E-7 T 12-10-2018 IPR009784 Protein of unknown function DUF1349 BEN31_06750 f6dc01055d7cdf735f1259739f761ccc 535 SUPERFAMILY SSF75005 3 317 8.28E-103 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN31_06750 f6dc01055d7cdf735f1259739f761ccc 535 Gene3D G3DSA:2.60.120.200 328 533 1.5E-61 T 12-10-2018 BEN31_06750 f6dc01055d7cdf735f1259739f761ccc 535 SUPERFAMILY SSF49899 327 532 3.17E-68 T 12-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily BEN31_06750 f6dc01055d7cdf735f1259739f761ccc 535 Gene3D G3DSA:2.115.10.20 1 326 7.5E-105 T 12-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily BEN31_06750 f6dc01055d7cdf735f1259739f761ccc 535 Pfam PF04616 Glycosyl hydrolases family 43 3 301 6.8E-109 T 12-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 BEN31_14985 470536e00dec98a03299cdde4f4760d7 179 Gene3D G3DSA:3.30.1440.10 1 179 6.3E-84 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14985 470536e00dec98a03299cdde4f4760d7 179 Pfam PF00281 Ribosomal protein L5 24 80 4.6E-28 T 12-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14985 470536e00dec98a03299cdde4f4760d7 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 8.9E-43 T 12-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14985 470536e00dec98a03299cdde4f4760d7 179 PIRSF PIRSF002161 1 179 7.6E-70 T 12-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14985 470536e00dec98a03299cdde4f4760d7 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 12-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_14985 470536e00dec98a03299cdde4f4760d7 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.713 T 12-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_14985 470536e00dec98a03299cdde4f4760d7 179 SUPERFAMILY SSF55282 3 178 4.47E-79 T 12-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_09300 56a23bc0258270be4c2dab32ec96b9d9 429 Gene3D G3DSA:1.20.1250.20 16 224 2.2E-14 T 12-10-2018 BEN31_09300 56a23bc0258270be4c2dab32ec96b9d9 429 SUPERFAMILY SSF103473 17 426 9.94E-45 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_09300 56a23bc0258270be4c2dab32ec96b9d9 429 Pfam PF11700 Vacuole effluxer Atg22 like 16 425 1.7E-35 T 12-10-2018 IPR024671 Autophagy-related protein 22-like BEN31_09300 56a23bc0258270be4c2dab32ec96b9d9 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 342 367 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_09300 56a23bc0258270be4c2dab32ec96b9d9 429 Gene3D G3DSA:1.20.1250.20 235 428 8.8E-21 T 12-10-2018 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 Pfam PF00232 Glycosyl hydrolase family 1 5 467 1.2E-152 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 SUPERFAMILY SSF51445 6 467 5.44E-169 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 5.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 298 312 5.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 432 444 5.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 365 373 5.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 5.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 Gene3D G3DSA:3.20.20.80 3 470 8.2E-161 T 12-10-2018 BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BEN31_16605 591b11a11a3293a48115d63a5dde7521 472 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 365 373 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 SMART SM00387 419 527 3.7E-19 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 2.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 2.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 2.4E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 Gene3D G3DSA:3.30.450.20 199 313 4.6E-19 T 12-10-2018 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 Gene3D G3DSA:1.10.287.130 314 379 9.1E-7 T 12-10-2018 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 SUPERFAMILY SSF103190 37 167 5.1E-38 T 12-10-2018 IPR029151 Periplasmic sensor-like domain superfamily BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 Gene3D G3DSA:3.30.450.20 32 170 2.0E-42 T 12-10-2018 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 SUPERFAMILY SSF55874 387 524 6.29E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 Gene3D G3DSA:3.30.565.10 380 532 2.6E-28 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 SUPERFAMILY SSF55890 323 413 2.62E-15 T 12-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 526 2.6E-18 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 Pfam PF17203 Single cache domain 3 36 166 4.8E-26 T 12-10-2018 IPR033463 Single cache domain 3 BEN31_01855 272c7f11b6cdf24b665a6728488f4abf 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 373 4.9E-12 T 12-10-2018 IPR039506 SpoOB, alpha-helical domain BEN31_00520 6eae7b269fdf0e55681f7bac5d7e9fa9 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 2.7E-44 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_00520 6eae7b269fdf0e55681f7bac5d7e9fa9 314 Gene3D G3DSA:1.10.3720.10 82 310 3.5E-24 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00520 6eae7b269fdf0e55681f7bac5d7e9fa9 314 SUPERFAMILY SSF161098 94 290 1.18E-19 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00520 6eae7b269fdf0e55681f7bac5d7e9fa9 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 312 9.9E-143 T 12-10-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 BEN31_16220 7b1cd40f27fa83677784e7b94d0134f7 411 Gene3D G3DSA:2.60.60.30 18 167 3.4E-23 T 12-10-2018 BEN31_16220 7b1cd40f27fa83677784e7b94d0134f7 411 Pfam PF02342 TerD domain 1 168 3.5E-20 T 12-10-2018 IPR003325 TerD domain BEN31_06290 85214b8121dbdd4b15cc6f6196dd10d9 302 PIRSF PIRSF000450 1 302 8.0E-146 T 12-10-2018 IPR033752 MetA family BEN31_06290 85214b8121dbdd4b15cc6f6196dd10d9 302 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 2.0E-126 T 12-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 BEN31_06290 85214b8121dbdd4b15cc6f6196dd10d9 302 SUPERFAMILY SSF52317 17 297 7.12E-101 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_06290 85214b8121dbdd4b15cc6f6196dd10d9 302 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-118 T 12-10-2018 BEN31_06290 85214b8121dbdd4b15cc6f6196dd10d9 302 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.3E-138 T 12-10-2018 IPR033752 MetA family BEN31_06290 85214b8121dbdd4b15cc6f6196dd10d9 302 Gene3D G3DSA:3.40.50.880 1 301 5.7E-126 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_06290 85214b8121dbdd4b15cc6f6196dd10d9 302 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 43.549 T 12-10-2018 IPR033752 MetA family BEN31_01125 7ab772c2c6313ca6792c9ad8bf2eaa9b 468 Gene3D G3DSA:1.20.1740.10 2 467 1.5E-63 T 12-10-2018 BEN31_01125 7ab772c2c6313ca6792c9ad8bf2eaa9b 468 Pfam PF13520 Amino acid permease 8 425 1.1E-52 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_01125 7ab772c2c6313ca6792c9ad8bf2eaa9b 468 PIRSF PIRSF006060 1 466 4.6E-55 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_04395 645fa179c0379f3ec74786ac70e48328 278 SUPERFAMILY SSF47413 22 84 7.82E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_04395 645fa179c0379f3ec74786ac70e48328 278 Pfam PF13560 Helix-turn-helix domain 32 88 1.0E-15 T 12-10-2018 BEN31_04395 645fa179c0379f3ec74786ac70e48328 278 Gene3D G3DSA:1.10.260.40 14 86 9.5E-9 T 12-10-2018 BEN31_04395 645fa179c0379f3ec74786ac70e48328 278 SMART SM00530 13 85 7.7E-6 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_04395 645fa179c0379f3ec74786ac70e48328 278 Gene3D G3DSA:3.30.450.180 110 275 1.5E-20 T 12-10-2018 BEN31_07375 d9c9503cac6b8b3aad093ff722bd8318 167 Gene3D G3DSA:3.40.30.10 23 166 4.6E-45 T 12-10-2018 BEN31_07375 d9c9503cac6b8b3aad093ff722bd8318 167 SUPERFAMILY SSF52833 31 161 8.39E-40 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_07375 d9c9503cac6b8b3aad093ff722bd8318 167 Pfam PF00578 AhpC/TSA family 35 149 5.5E-30 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_00740 05e18bf741b765ce932152c3ad660308 67 Pfam PF12844 Helix-turn-helix domain 8 64 3.7E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00740 05e18bf741b765ce932152c3ad660308 67 SMART SM00530 4 59 4.2E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00740 05e18bf741b765ce932152c3ad660308 67 Gene3D G3DSA:1.10.260.40 2 64 3.5E-13 T 12-10-2018 BEN31_00740 05e18bf741b765ce932152c3ad660308 67 SUPERFAMILY SSF47413 4 61 9.57E-12 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_14900 266d3d665dbd1fdd9af3ce83f05834b4 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14900 266d3d665dbd1fdd9af3ce83f05834b4 120 Pfam PF01196 Ribosomal protein L17 16 120 1.6E-39 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14900 266d3d665dbd1fdd9af3ce83f05834b4 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 120 2.6E-49 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14900 266d3d665dbd1fdd9af3ce83f05834b4 120 SUPERFAMILY SSF64263 2 120 2.22E-45 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14900 266d3d665dbd1fdd9af3ce83f05834b4 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 28.803 T 12-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14900 266d3d665dbd1fdd9af3ce83f05834b4 120 Gene3D G3DSA:3.90.1030.10 1 120 5.9E-50 T 12-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 SMART SM00866 95 234 5.3E-44 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 SMART SM00345 15 74 3.9E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 Gene3D G3DSA:1.10.10.10 9 76 1.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 SUPERFAMILY SSF64288 62 240 9.74E-56 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 Gene3D G3DSA:3.40.1410.10 77 241 9.3E-53 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 SUPERFAMILY SSF46785 3 85 2.19E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.8E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.8E-10 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.4E-20 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_18510 3b7b41ce96f1cce5a3932dffc8a4b3a3 241 Pfam PF07702 UTRA domain 96 234 1.1E-42 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_18275 38a24154df3827d09a2764471bae88bb 139 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 2 138 5.4E-57 T 12-10-2018 IPR022258 Flagellar operon protein YvyF BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 Gene3D G3DSA:4.10.870.10 589 679 5.7E-232 T 12-10-2018 IPR027390 Endoglucanase F, domain 3 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 SUPERFAMILY SSF48208 3 700 1.7E-262 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 Gene3D G3DSA:1.50.10.10 4 699 5.7E-232 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 Gene3D G3DSA:2.170.160.10 84 313 5.7E-232 T 12-10-2018 IPR023309 Endoglucanase F, domain 2 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 PRINTS PR00844 Glycosyl hydrolase family 48 signature 218 245 7.9E-78 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 PRINTS PR00844 Glycosyl hydrolase family 48 signature 171 195 7.9E-78 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 PRINTS PR00844 Glycosyl hydrolase family 48 signature 284 303 7.9E-78 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 PRINTS PR00844 Glycosyl hydrolase family 48 signature 355 378 7.9E-78 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 PRINTS PR00844 Glycosyl hydrolase family 48 signature 52 69 7.9E-78 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 PRINTS PR00844 Glycosyl hydrolase family 48 signature 401 427 7.9E-78 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 PRINTS PR00844 Glycosyl hydrolase family 48 signature 26 51 7.9E-78 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 Pfam PF02011 Glycosyl hydrolase family 48 4 458 5.3E-198 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_08000 7638a7c154971189eda4f6024d3e3574 701 Pfam PF02011 Glycosyl hydrolase family 48 489 699 3.6E-41 T 12-10-2018 IPR000556 Glycoside hydrolase, 48F GO:0004553|GO:0008810|GO:0030245 BEN31_07145 56770b4d76426ebb3d48c005346d0e27 310 SUPERFAMILY SSF160964 30 74 6.15E-5 T 12-10-2018 BEN31_07145 56770b4d76426ebb3d48c005346d0e27 310 SUPERFAMILY SSF161098 71 296 1.03E-64 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_07145 56770b4d76426ebb3d48c005346d0e27 310 Gene3D G3DSA:1.10.3720.10 67 309 2.1E-73 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_07145 56770b4d76426ebb3d48c005346d0e27 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 301 3.9E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 SUPERFAMILY SSF53335 11 462 3.32E-69 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 Gene3D G3DSA:3.90.120.10 396 455 2.0E-5 T 12-10-2018 BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 10 26 2.3E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 173 186 2.3E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 115 129 2.3E-9 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 Gene3D G3DSA:3.40.50.150 10 193 1.2E-43 T 12-10-2018 BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 Pfam PF00145 C-5 cytosine-specific DNA methylase 11 186 3.7E-20 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_00780 4e551ae15389fe0ca0538d2a0d26c413 482 Pfam PF00145 C-5 cytosine-specific DNA methylase 383 462 7.3E-5 T 12-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 Pfam PF01795 MraW methylase family 2 310 2.3E-135 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 PIRSF PIRSF004486 1 310 1.5E-110 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 Gene3D G3DSA:1.10.150.170 111 215 7.2E-107 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 310 3.8E-132 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 38.713 T 12-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 Gene3D G3DSA:3.40.50.150 7 309 7.2E-107 T 12-10-2018 BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 SUPERFAMILY SSF53335 4 309 6.05E-46 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_08755 aa52c20a8ba9d764a786511386ffb481 310 SUPERFAMILY SSF81799 113 214 4.19E-36 T 12-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 SUPERFAMILY SSF55957 357 446 1.1E-27 T 12-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 133 2.3E-43 T 12-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 SUPERFAMILY SSF53738 257 366 1.06E-33 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 3.4E-36 T 12-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.385 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 443 1.7E-186 T 12-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Gene3D G3DSA:3.40.120.10 3 155 3.7E-58 T 12-10-2018 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 12-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 1.1E-15 T 12-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 SUPERFAMILY SSF53738 3 180 3.92E-46 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 2.5E-19 T 12-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Gene3D G3DSA:3.40.120.10 256 339 2.9E-72 T 12-10-2018 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Gene3D G3DSA:3.30.310.50 370 448 3.2E-30 T 12-10-2018 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 SUPERFAMILY SSF53738 158 256 1.02E-25 T 12-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 Gene3D G3DSA:3.40.120.10 174 362 2.9E-72 T 12-10-2018 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 8.2E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 8.2E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_14695 01f4d3fa6bccf8a0142f37a1576ef397 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 8.2E-12 T 12-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 BEN31_01830 40826182dd5367b2d2b5e026fe191375 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 295 9.0E-38 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BEN31_14085 13864484951b32b0327273511aa1e377 397 SUPERFAMILY SSF103473 3 383 1.44E-38 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14085 13864484951b32b0327273511aa1e377 397 Gene3D G3DSA:1.20.1250.20 4 185 1.6E-16 T 12-10-2018 BEN31_14085 13864484951b32b0327273511aa1e377 397 Pfam PF07690 Major Facilitator Superfamily 11 341 7.8E-21 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_14085 13864484951b32b0327273511aa1e377 397 Gene3D G3DSA:1.20.1250.20 202 381 1.8E-21 T 12-10-2018 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 Pfam PF08245 Mur ligase middle domain 37 201 1.9E-9 T 12-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 2 383 6.7E-174 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 258 275 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 293 308 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 362 378 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 4.7E-107 T 12-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 SUPERFAMILY SSF53623 33 235 9.16E-18 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_17950 56abe30f53c5a28d577a7c39f8cb79c5 393 Gene3D G3DSA:3.40.1190.10 29 238 4.7E-17 T 12-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 BEN31_17010 a24f9efabe3de1284e73d268c0f8de31 46 SUPERFAMILY SSF47406 8 37 1.83E-8 T 12-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 BEN31_17010 a24f9efabe3de1284e73d268c0f8de31 46 Pfam PF08671 Anti-repressor SinI 10 35 2.8E-11 T 12-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 BEN31_11055 760bde89da8e232f97b3b7225509b882 69 ProDom PD056348 YHEE BH1143 1 69 3.0E-27 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 BEN31_11055 760bde89da8e232f97b3b7225509b882 69 PIRSF PIRSF037692 1 69 1.0E-35 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 BEN31_11055 760bde89da8e232f97b3b7225509b882 69 Pfam PF17277 Family of unknown function (DUF5342) 1 69 4.5E-34 T 12-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 BEN31_08580 18c89bd4ec5ac7bbedeb1acc6a111e0a 124 Gene3D G3DSA:1.20.120.910 2 105 4.8E-13 T 12-10-2018 BEN31_08580 18c89bd4ec5ac7bbedeb1acc6a111e0a 124 PIRSF PIRSF026544 1 123 8.3E-46 T 12-10-2018 IPR016841 Transcription regulator DksA-related, predicted BEN31_09400 9cf00c468444e69a0d467c568f40c88f 438 PIRSF PIRSF038958 1 437 1.9E-70 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BEN31_09400 9cf00c468444e69a0d467c568f40c88f 438 Pfam PF01943 Polysaccharide biosynthesis protein 5 293 1.2E-25 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BEN31_01210 17740d5c5b9d7d367002a89fb354cc79 220 Pfam PF04012 PspA/IM30 family 1 204 1.3E-49 T 12-10-2018 IPR007157 PspA/IM30 BEN31_12830 a5eddc749c9de2597bd08e6532a3ad71 122 Pfam PF03330 Lytic transglycolase 31 120 1.5E-7 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain BEN31_12830 a5eddc749c9de2597bd08e6532a3ad71 122 Gene3D G3DSA:2.40.40.10 30 122 9.9E-6 T 12-10-2018 IPR036908 RlpA-like domain superfamily BEN31_12415 6c5111f0168d70999c4efeead0b70b6b 281 SUPERFAMILY SSF46689 3 69 1.41E-19 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_12415 6c5111f0168d70999c4efeead0b70b6b 281 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_12415 6c5111f0168d70999c4efeead0b70b6b 281 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.1E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_12415 6c5111f0168d70999c4efeead0b70b6b 281 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.1E-11 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_12415 6c5111f0168d70999c4efeead0b70b6b 281 Gene3D G3DSA:1.10.357.10 1 203 2.1E-31 T 12-10-2018 BEN31_12415 6c5111f0168d70999c4efeead0b70b6b 281 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 3.7E-19 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 SMART SM00091 12 81 0.0088 T 12-10-2018 IPR000014 PAS domain BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 Pfam PF01740 STAS domain 153 256 5.3E-5 T 12-10-2018 IPR002645 STAS domain BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 Pfam PF13426 PAS domain 33 130 8.8E-20 T 12-10-2018 IPR000014 PAS domain BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 Gene3D G3DSA:3.30.750.24 150 261 1.4E-27 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 SMART SM00086 87 131 0.0013 T 12-10-2018 IPR001610 PAC motif BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 SUPERFAMILY SSF52091 152 260 1.65E-12 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 Gene3D G3DSA:3.30.450.20 24 149 1.5E-43 T 12-10-2018 BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 SUPERFAMILY SSF55785 19 129 1.92E-21 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_17850 f90ddf6519710096d65ddcfb5eed88ba 262 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 137 1.1E-16 T 12-10-2018 IPR000014 PAS domain BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 12-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 7.9E-97 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 8.9E-43 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 Pfam PF00303 Thymidylate synthase 2 264 4.1E-129 T 12-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.7E-50 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 Gene3D G3DSA:3.30.572.10 1 264 1.3E-133 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 SUPERFAMILY SSF55831 1 264 5.76E-131 T 12-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_06340 47d3ccc20a9b75ffd6192173788d3b37 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.218 T 12-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 SUPERFAMILY SSF55785 235 334 8.72E-17 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 Pfam PF08447 PAS fold 97 187 1.3E-21 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 Pfam PF08447 PAS fold 237 327 4.5E-23 T 12-10-2018 IPR013655 PAS fold-3 GO:0005515 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 SUPERFAMILY SSF58104 330 502 5.89E-46 T 12-10-2018 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 SMART SM00086 291 333 1.7E-6 T 12-10-2018 IPR001610 PAC motif BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 SMART SM00086 152 194 6.6E-5 T 12-10-2018 IPR001610 PAC motif BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 SUPERFAMILY SSF55785 98 195 8.55E-14 T 12-10-2018 IPR035965 PAS domain superfamily BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 Gene3D G3DSA:3.30.450.20 199 326 6.2E-25 T 12-10-2018 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 SMART SM00283 328 504 4.0E-5 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 Gene3D G3DSA:2.10.70.100 148 195 2.8E-10 T 12-10-2018 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 Gene3D G3DSA:3.30.450.20 65 143 3.6E-10 T 12-10-2018 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 118 201 9.5E-7 T 12-10-2018 IPR000014 PAS domain BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 238 338 7.9E-8 T 12-10-2018 IPR000014 PAS domain BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 Gene3D G3DSA:1.10.287.950 327 504 1.0E-38 T 12-10-2018 BEN31_16455 daca49edb7bc8d3658f115476a840ed5 504 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 386 495 1.1E-28 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 SUPERFAMILY SSF53807 35 328 1.03E-80 T 12-10-2018 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 Gene3D G3DSA:3.40.50.1980 25 215 3.4E-53 T 12-10-2018 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 326 9.8E-72 T 12-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00690 Adhesin family signature 67 80 2.5E-6 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00690 Adhesin family signature 80 97 2.5E-6 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00690 Adhesin family signature 36 54 2.5E-6 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00690 Adhesin family signature 266 284 2.5E-6 T 12-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00691 Adhesin B signature 306 324 4.2E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00691 Adhesin B signature 36 57 4.2E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00691 Adhesin B signature 80 99 4.2E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 PRINTS PR00691 Adhesin B signature 61 79 4.2E-9 T 12-10-2018 IPR006129 Adhesin B GO:0007155 BEN31_02490 876afd768788ce0cdb0d48dcf24c2829 329 Gene3D G3DSA:3.40.50.1980 216 329 1.7E-40 T 12-10-2018 BEN31_13710 cacff4ce2ffc9d4f126c5edf6361e92f 204 Pfam PF07987 Domain of unkown function (DUF1775) 25 142 1.0E-18 T 12-10-2018 IPR012533 YcnI-like BEN31_13710 cacff4ce2ffc9d4f126c5edf6361e92f 204 Gene3D G3DSA:2.60.40.2230 22 167 2.1E-33 T 12-10-2018 IPR038507 YcnI-like superfamily BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 SUPERFAMILY SSF55594 1 83 1.44E-28 T 12-10-2018 IPR035895 HPr-like superfamily BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.9E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.9E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.9E-26 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.1E-29 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 Gene3D G3DSA:3.30.1340.10 1 88 4.3E-37 T 12-10-2018 IPR035895 HPr-like superfamily BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 12-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site BEN31_09365 33cbce761d011252451be6e20fb20d0b 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.9E-33 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 SUPERFAMILY SSF47648 1 69 1.83E-22 T 12-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 2.1E-182 T 12-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 2.8E-49 T 12-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 Gene3D G3DSA:3.40.1030.10 69 334 1.7E-118 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 4.6E-27 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 Gene3D G3DSA:1.20.970.10 1 67 4.7E-30 T 12-10-2018 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 Gene3D G3DSA:3.90.1170.30 335 423 3.1E-35 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 7.5E-22 T 12-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 SMART SM00941 345 418 1.4E-32 T 12-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 SUPERFAMILY SSF54680 331 431 1.11E-29 T 12-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 12-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 PIRSF PIRSF000478 1 432 5.2E-171 T 12-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_16515 5d9e0ea9c2e9aa66c63fd9ff0528ccf6 433 SUPERFAMILY SSF52418 69 329 5.1E-92 T 12-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 Gene3D G3DSA:2.40.50.140 1 66 3.4E-30 T 12-10-2018 BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 SUPERFAMILY SSF50249 1 65 3.05E-25 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 SMART SM00357 3 66 2.2E-31 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 PRINTS PR00050 Cold shock protein signature 39 57 1.8E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 PRINTS PR00050 Cold shock protein signature 24 33 1.8E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.2E-31 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site BEN31_13185 08cd0a355f502fa74bd52c3e76059455 67 PIRSF PIRSF002599 1 67 9.3E-25 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 BEN31_14615 003bf4bc27277cdf650d626b74b5a52a 201 Pfam PF13346 ABC-2 family transporter protein 3 197 1.0E-35 T 12-10-2018 IPR025699 ABC-2 membrane transporter-like BEN31_01685 2a31ad6748409085931484fab0b08d6e 965 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 11 200 7.1E-78 T 12-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 BEN31_08695 c1d350a763a70d6713e8f8220a84afe0 241 Gene3D G3DSA:3.30.70.1880 84 240 1.1E-14 T 12-10-2018 BEN31_08695 c1d350a763a70d6713e8f8220a84afe0 241 Pfam PF05949 Bacterial protein of unknown function (DUF881) 86 229 2.3E-28 T 12-10-2018 IPR010273 Protein of unknown function DUF881 BEN31_16485 0e5632e91e6253b7b9b64c2df8e28346 365 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 114 2.7E-8 T 12-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 BEN31_16485 0e5632e91e6253b7b9b64c2df8e28346 365 Gene3D G3DSA:3.40.50.720 1 115 1.1E-14 T 12-10-2018 BEN31_16485 0e5632e91e6253b7b9b64c2df8e28346 365 Gene3D G3DSA:3.30.360.10 127 304 3.5E-19 T 12-10-2018 BEN31_16485 0e5632e91e6253b7b9b64c2df8e28346 365 SUPERFAMILY SSF51735 4 137 1.88E-9 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_09355 b78d9f65b36f6535c03bd8d8a8d97393 80 Pfam PF11132 Transcriptional regulator protein (SplA) 9 80 3.2E-38 T 12-10-2018 IPR022608 Transcription regulator SplA BEN31_09355 b78d9f65b36f6535c03bd8d8a8d97393 80 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 6 80 9.0E-24 T 12-10-2018 BEN31_11935 0befb9f176e83fe60301f9068494a371 319 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 17 315 3.3E-102 T 12-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 BEN31_11935 0befb9f176e83fe60301f9068494a371 319 Pfam PF01544 CorA-like Mg2+ transporter protein 28 310 1.1E-77 T 12-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 BEN31_11935 0befb9f176e83fe60301f9068494a371 319 Gene3D G3DSA:1.20.58.340 239 315 6.9E-32 T 12-10-2018 BEN31_11935 0befb9f176e83fe60301f9068494a371 319 SUPERFAMILY SSF144083 250 312 1.44E-21 T 12-10-2018 BEN31_11935 0befb9f176e83fe60301f9068494a371 319 Gene3D G3DSA:3.30.460.20 4 124 1.3E-31 T 12-10-2018 BEN31_11935 0befb9f176e83fe60301f9068494a371 319 Gene3D G3DSA:1.20.58.340 125 237 1.5E-28 T 12-10-2018 BEN31_11935 0befb9f176e83fe60301f9068494a371 319 SUPERFAMILY SSF143865 12 249 5.1E-64 T 12-10-2018 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 Gene3D G3DSA:3.30.300.30 133 222 3.5E-8 T 12-10-2018 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 Pfam PF01514 Secretory protein of YscJ/FliF family 31 221 2.9E-61 T 12-10-2018 IPR006182 Secretory protein YscJ/FliF BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 PIRSF PIRSF004862 474 530 3.3E-5 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 PIRSF PIRSF004862 1 501 7.0E-106 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 PRINTS PR01009 Flagellar M-ring protein signature 122 140 3.1E-24 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 PRINTS PR01009 Flagellar M-ring protein signature 269 287 3.1E-24 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 PRINTS PR01009 Flagellar M-ring protein signature 198 216 3.1E-24 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 PRINTS PR01009 Flagellar M-ring protein signature 154 168 3.1E-24 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 PRINTS PR01009 Flagellar M-ring protein signature 348 372 3.1E-24 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 530 7.6E-152 T 12-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 BEN31_08200 d837c2dafb34e7e65f37830b15c03400 530 Pfam PF08345 Flagellar M-ring protein C-terminal 256 401 8.1E-21 T 12-10-2018 IPR013556 Flagellar M-ring C-terminal BEN31_02970 173ab38554a47c67a8776aa9b3942456 562 Pfam PF01391 Collagen triple helix repeat (20 copies) 32 86 1.4E-7 T 12-10-2018 IPR008160 Collagen triple helix repeat BEN31_02970 173ab38554a47c67a8776aa9b3942456 562 Pfam PF01391 Collagen triple helix repeat (20 copies) 366 422 2.6E-7 T 12-10-2018 IPR008160 Collagen triple helix repeat BEN31_06285 085bcd7112c2f1ec825cc32ebf2d1f5e 383 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 18 179 2.0E-44 T 12-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 BEN31_06285 085bcd7112c2f1ec825cc32ebf2d1f5e 383 SUPERFAMILY SSF53756 5 367 7.07E-44 T 12-10-2018 BEN31_06285 085bcd7112c2f1ec825cc32ebf2d1f5e 383 Gene3D G3DSA:3.40.50.2000 187 353 3.9E-35 T 12-10-2018 BEN31_06285 085bcd7112c2f1ec825cc32ebf2d1f5e 383 Hamap MF_01280 Processive diacylglycerol beta-glucosyltransferase [ugtP]. 1 383 52.988 T 12-10-2018 IPR023589 Processive diacylglycerol beta-glucosyltransferase GO:0047228 KEGG: 00561+2.4.1.315|MetaCyc: PWY-7817 BEN31_06285 085bcd7112c2f1ec825cc32ebf2d1f5e 383 Pfam PF00534 Glycosyl transferases group 1 200 351 4.0E-16 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BEN31_01290 5c595d1708df1e6dedc44a36e6291d6a 276 SUPERFAMILY SSF52540 4 229 1.3E-59 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01290 5c595d1708df1e6dedc44a36e6291d6a 276 SMART SM00382 28 225 1.9E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_01290 5c595d1708df1e6dedc44a36e6291d6a 276 Gene3D G3DSA:3.40.50.300 1 251 1.1E-64 T 12-10-2018 BEN31_01290 5c595d1708df1e6dedc44a36e6291d6a 276 Pfam PF00005 ABC transporter 20 167 2.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_01290 5c595d1708df1e6dedc44a36e6291d6a 276 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_06430 28f63d97198536107f718dcb92bbb866 240 Gene3D G3DSA:3.90.550.10 5 233 1.8E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_06430 28f63d97198536107f718dcb92bbb866 240 SUPERFAMILY SSF53448 6 233 1.6E-29 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_06430 28f63d97198536107f718dcb92bbb866 240 Pfam PF02348 Cytidylyltransferase 25 189 6.5E-12 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BEN31_14380 d9e9adc5d1ba5f7e5aaa69ca6351aa02 276 Gene3D G3DSA:3.30.70.120 188 263 6.0E-26 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_14380 d9e9adc5d1ba5f7e5aaa69ca6351aa02 276 PIRSF PIRSF006483 1 276 9.6E-85 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_14380 d9e9adc5d1ba5f7e5aaa69ca6351aa02 276 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 210 2.7E-59 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_14380 d9e9adc5d1ba5f7e5aaa69ca6351aa02 276 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 3.5E-22 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BEN31_04815 461cf727a4aaecec504cf5689f589a3e 711 SUPERFAMILY SSF56519 63 317 4.19E-36 T 12-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 BEN31_04815 461cf727a4aaecec504cf5689f589a3e 711 Gene3D G3DSA:1.10.10.1230 92 193 4.6E-234 T 12-10-2018 BEN31_04815 461cf727a4aaecec504cf5689f589a3e 711 SUPERFAMILY SSF56601 270 683 1.11E-61 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_04815 461cf727a4aaecec504cf5689f589a3e 711 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 302 1.0E-39 T 12-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 BEN31_04815 461cf727a4aaecec504cf5689f589a3e 711 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 675 9.7E-68 T 12-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 BEN31_04815 461cf727a4aaecec504cf5689f589a3e 711 Gene3D G3DSA:3.90.1310.30 67 571 4.6E-234 T 12-10-2018 BEN31_04815 461cf727a4aaecec504cf5689f589a3e 711 Gene3D G3DSA:3.40.710.10 318 666 4.6E-234 T 12-10-2018 BEN31_14920 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14920 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14920 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14920 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 12-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_14920 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 12-10-2018 BEN31_14920 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 12-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_11010 82a996198e43326c650e609566b844f8 165 Pfam PF02080 TrkA-C domain 90 157 2.0E-13 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BEN31_11010 82a996198e43326c650e609566b844f8 165 SUPERFAMILY SSF116726 79 158 2.75E-16 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_11010 82a996198e43326c650e609566b844f8 165 PIRSF PIRSF005028 1 162 3.4E-57 T 12-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT BEN31_11010 82a996198e43326c650e609566b844f8 165 Gene3D G3DSA:3.30.70.1450 85 158 9.0E-18 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_17075 d925e8f21130a6c475de4f65565752d6 403 Pfam PF01098 Cell cycle protein 11 394 3.0E-93 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.8E-19 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 SUPERFAMILY SSF53822 63 333 9.42E-87 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 Gene3D G3DSA:3.40.50.2300 64 311 1.5E-93 T 12-10-2018 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 SMART SM00354 3 73 7.3E-39 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 Gene3D G3DSA:3.40.50.2300 162 292 1.5E-93 T 12-10-2018 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 SUPERFAMILY SSF47413 3 61 6.88E-20 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 TIGRFAM TIGR01481 ccpA: catabolite control protein A 3 333 3.5E-162 T 12-10-2018 IPR006377 Catabolite control protein A GO:0006355 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 Gene3D G3DSA:1.10.260.40 3 61 1.1E-28 T 12-10-2018 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 Pfam PF13377 Periplasmic binding protein-like domain 170 332 6.3E-38 T 12-10-2018 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 12-10-2018 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_02920 5be0ef10c2e5f024197dca564f3f41d3 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.4E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 5 331 7.8E-136 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 SUPERFAMILY SSF53067 144 328 2.27E-47 T 12-10-2018 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 Gene3D G3DSA:3.90.640.10 181 254 8.6E-123 T 12-10-2018 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 Pfam PF06723 MreB/Mbl protein 5 331 6.0E-143 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.1E-54 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.1E-54 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.1E-54 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.1E-54 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 1.1E-54 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 Gene3D G3DSA:3.30.420.40 7 322 8.6E-123 T 12-10-2018 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 Gene3D G3DSA:3.30.420.40 149 312 8.6E-123 T 12-10-2018 BEN31_09075 ac248d3076953e2c9a7ae5490b62222c 335 SUPERFAMILY SSF53067 6 141 4.53E-37 T 12-10-2018 BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 2.6E-5 T 12-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 SUPERFAMILY SSF50129 4 145 5.63E-42 T 12-10-2018 IPR011032 GroES-like superfamily BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 Gene3D G3DSA:3.40.50.720 128 296 2.8E-112 T 12-10-2018 BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 327 4.0E-128 T 12-10-2018 IPR014188 Acrylyl-CoA reductase AcuI BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 Pfam PF00107 Zinc-binding dehydrogenase 162 275 2.0E-16 T 12-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 Gene3D G3DSA:3.90.180.10 20 327 2.8E-112 T 12-10-2018 BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 SUPERFAMILY SSF51735 118 293 1.5E-37 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_10080 e8228be3bbad21210f8dbeda41447861 328 SMART SM00829 12 326 1.3E-5 T 12-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 BEN31_16210 42314980001b62a47fcd49244d8042ef 478 Pfam PF00232 Glycosyl hydrolase family 1 2 475 2.7E-132 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16210 42314980001b62a47fcd49244d8042ef 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BEN31_16210 42314980001b62a47fcd49244d8042ef 478 SUPERFAMILY SSF51445 2 471 7.64E-162 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_16210 42314980001b62a47fcd49244d8042ef 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BEN31_16210 42314980001b62a47fcd49244d8042ef 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 303 317 9.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16210 42314980001b62a47fcd49244d8042ef 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 9.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16210 42314980001b62a47fcd49244d8042ef 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 9.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16210 42314980001b62a47fcd49244d8042ef 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 9.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16210 42314980001b62a47fcd49244d8042ef 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 9.2E-18 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16210 42314980001b62a47fcd49244d8042ef 478 Gene3D G3DSA:3.20.20.80 1 478 7.3E-165 T 12-10-2018 BEN31_12170 723be25cb932c6345c9f37f588408e8a 232 SMART SM00448 2 115 7.8E-23 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_12170 723be25cb932c6345c9f37f588408e8a 232 PIRSF PIRSF006171 1 229 3.4E-78 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BEN31_12170 723be25cb932c6345c9f37f588408e8a 232 Pfam PF08279 HTH domain 165 224 1.7E-7 T 12-10-2018 IPR013196 Helix-turn-helix, type 11 BEN31_12170 723be25cb932c6345c9f37f588408e8a 232 Pfam PF00072 Response regulator receiver domain 4 114 1.1E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_12170 723be25cb932c6345c9f37f588408e8a 232 SUPERFAMILY SSF52172 2 127 9.96E-29 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_12170 723be25cb932c6345c9f37f588408e8a 232 Gene3D G3DSA:3.40.50.12740 2 215 1.8E-27 T 12-10-2018 BEN31_09145 f2fe5d6489de1190256b84cbfb813afc 163 SUPERFAMILY SSF54690 4 137 3.27E-48 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BEN31_09145 f2fe5d6489de1190256b84cbfb813afc 163 Gene3D G3DSA:3.90.1170.40 2 146 1.9E-55 T 12-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BEN31_09145 f2fe5d6489de1190256b84cbfb813afc 163 Pfam PF02391 MoaE protein 7 118 2.1E-39 T 12-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 BEN31_11690 c52a1f9969cc4485d39b9ce2e835dc57 435 Pfam PF03787 RAMP superfamily 35 192 1.6E-12 T 12-10-2018 IPR005537 CRISPR type III-associated RAMP protein BEN31_11690 c52a1f9969cc4485d39b9ce2e835dc57 435 TIGRFAM TIGR01894 cas_TM1795_cmr1: CRISPR type III-B/RAMP module RAMP protein Cmr1 37 195 2.3E-24 T 12-10-2018 IPR007522 CRISPR-associated protein TM1795 BEN31_06090 135eb5aa7249602d21a747c4c289b089 158 SUPERFAMILY SSF54403 96 156 9.01E-16 T 12-10-2018 BEN31_06090 135eb5aa7249602d21a747c4c289b089 158 SUPERFAMILY SSF54403 32 95 5.19E-14 T 12-10-2018 BEN31_06090 135eb5aa7249602d21a747c4c289b089 158 Gene3D G3DSA:3.10.450.40 25 95 2.7E-24 T 12-10-2018 BEN31_06090 135eb5aa7249602d21a747c4c289b089 158 Pfam PF03413 Peptidase propeptide and YPEB domain 97 155 3.1E-6 T 12-10-2018 IPR025711 PepSY domain BEN31_06090 135eb5aa7249602d21a747c4c289b089 158 Gene3D G3DSA:3.10.450.40 96 158 9.1E-28 T 12-10-2018 BEN31_11345 1b45644f90822135f528da4e7b9dbca8 174 Gene3D G3DSA:3.40.50.360 1 174 8.1E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_11345 1b45644f90822135f528da4e7b9dbca8 174 SUPERFAMILY SSF52218 1 170 6.95E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_11345 1b45644f90822135f528da4e7b9dbca8 174 Pfam PF03358 NADPH-dependent FMN reductase 35 120 7.4E-12 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 SMART SM00316 149 211 0.017 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 SMART SM00316 67 133 18.0 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 SMART SM00316 2 62 0.42 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 Gene3D G3DSA:2.40.50.140 71 148 2.2E-25 T 12-10-2018 BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 Gene3D G3DSA:1.10.10.10 220 279 2.1E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 Pfam PF13509 S1 domain 4 62 4.0E-16 T 12-10-2018 IPR039566 Conserved virulence factor B, S1 domain BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 PIRSF PIRSF012524 1 282 4.8E-110 T 12-10-2018 IPR014464 Conserved virulence factor B BEN31_10515 6e5603ebb1b031f344405c281f2faa05 282 Gene3D G3DSA:2.40.50.140 151 218 1.2E-18 T 12-10-2018 BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 257 5.3E-33 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 Gene3D G3DSA:3.30.1240.10 84 213 9.8E-101 T 12-10-2018 BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 SUPERFAMILY SSF56784 1 288 1.24E-68 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 284 8.1E-65 T 12-10-2018 BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 12-10-2018 BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 ProSitePatterns PS01229 Hypothetical cof family signature 2. 238 260 - T 12-10-2018 BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 284 3.4E-62 T 12-10-2018 IPR000150 Cof family GO:0016787 BEN31_17845 e56cfa1895ade91fed0f1e5fa55ce111 289 Gene3D G3DSA:3.40.50.1000 6 281 9.8E-101 T 12-10-2018 IPR023214 HAD superfamily BEN31_00450 88d0763f0c275b566adea7b9116903b5 243 Pfam PF02706 Chain length determinant protein 4 91 1.7E-15 T 12-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 BEN31_00405 f14aa5f59e2c7a1d1c38b6dc1caee246 272 SUPERFAMILY SSF52540 2 248 1.31E-52 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00405 f14aa5f59e2c7a1d1c38b6dc1caee246 272 Pfam PF00005 ABC transporter 22 176 1.8E-27 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00405 f14aa5f59e2c7a1d1c38b6dc1caee246 272 SMART SM00382 30 225 3.1E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_00405 f14aa5f59e2c7a1d1c38b6dc1caee246 272 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_00405 f14aa5f59e2c7a1d1c38b6dc1caee246 272 Gene3D G3DSA:3.40.50.300 2 270 7.8E-69 T 12-10-2018 BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 Gene3D G3DSA:2.60.120.10 57 230 3.8E-174 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 SMART SM00835 229 370 2.5E-25 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 SMART SM00835 51 193 4.8E-19 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 Pfam PF00190 Cupin 58 191 1.3E-23 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 Pfam PF00190 Cupin 230 348 3.6E-22 T 12-10-2018 IPR006045 Cupin 1 GO:0045735 BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 15 380 2.5E-179 T 12-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 SUPERFAMILY SSF51182 11 378 3.64E-101 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_11710 f3eff8a35531df96c99c44e1b24451f1 387 Gene3D G3DSA:2.60.120.10 9 372 3.8E-174 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_00630 1afa17aaa60489fe333ffbb0e8b6b739 153 SUPERFAMILY SSF55729 8 149 4.56E-31 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_00630 1afa17aaa60489fe333ffbb0e8b6b739 153 Gene3D G3DSA:3.40.630.30 1 152 7.7E-47 T 12-10-2018 BEN31_00630 1afa17aaa60489fe333ffbb0e8b6b739 153 Pfam PF00583 Acetyltransferase (GNAT) family 33 115 9.1E-16 T 12-10-2018 IPR000182 GNAT domain BEN31_17245 3aa4b25ab173fe8738a966aa3dfd2e52 398 Pfam PF00155 Aminotransferase class I and II 34 381 3.7E-57 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_17245 3aa4b25ab173fe8738a966aa3dfd2e52 398 Gene3D G3DSA:3.40.640.10 66 287 9.7E-105 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_17245 3aa4b25ab173fe8738a966aa3dfd2e52 398 SUPERFAMILY SSF53383 9 385 3.62E-98 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_17245 3aa4b25ab173fe8738a966aa3dfd2e52 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 12-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 BEN31_17245 3aa4b25ab173fe8738a966aa3dfd2e52 398 Gene3D G3DSA:3.90.1150.10 41 382 9.7E-105 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_08840 b67b3a9efb50464a7a6a5144ae9f7918 82 Pfam PF14003 YlbE-like protein 14 73 5.9E-26 T 12-10-2018 IPR025613 YlbE-like protein BEN31_00135 bb460bab90af5979da76b0110cf86aff 267 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 39 260 1.4E-59 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 BEN31_00135 bb460bab90af5979da76b0110cf86aff 267 Gene3D G3DSA:3.30.1360.170 38 263 1.1E-53 T 12-10-2018 BEN31_00135 bb460bab90af5979da76b0110cf86aff 267 SUPERFAMILY SSF69796 40 261 4.58E-45 T 12-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 BEN31_00135 bb460bab90af5979da76b0110cf86aff 267 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 1 267 22.214 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 BEN31_00135 bb460bab90af5979da76b0110cf86aff 267 Pfam PF02511 Thymidylate synthase complementing protein 40 254 1.1E-50 T 12-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 BEN31_14760 c3930e2125fa12c95b6690563f089ea6 457 Pfam PF02378 Phosphotransferase system, EIIC 120 389 7.9E-39 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_14760 c3930e2125fa12c95b6690563f089ea6 457 Gene3D G3DSA:3.30.1360.60 2 81 1.6E-23 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_14760 c3930e2125fa12c95b6690563f089ea6 457 Pfam PF00367 phosphotransferase system, EIIB 12 44 1.8E-12 T 12-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 BEN31_14760 c3930e2125fa12c95b6690563f089ea6 457 SUPERFAMILY SSF55604 10 84 1.96E-16 T 12-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.3E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.3E-5 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 SMART SM00354 1 78 2.0E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 Gene3D G3DSA:3.40.50.2300 81 331 1.3E-55 T 12-10-2018 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 Gene3D G3DSA:3.40.50.2300 165 300 1.3E-55 T 12-10-2018 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 Gene3D G3DSA:1.10.260.40 1 47 1.7E-16 T 12-10-2018 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 SUPERFAMILY SSF47413 3 50 1.89E-11 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 SUPERFAMILY SSF53822 66 333 2.16E-53 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 49 4.2E-16 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_07135 5332992cf3f2b6e760fb445c608e617a 346 Pfam PF13377 Periplasmic binding protein-like domain 173 339 2.5E-36 T 12-10-2018 BEN31_15395 c12fc7bc690ac1ba533ca0ac4f5b62db 124 Pfam PF04977 Septum formation initiator 45 119 9.4E-18 T 12-10-2018 IPR007060 Septum formation initiator FtsL/DivIC BEN31_16945 3016e93bb8818550a072d0656b0d792f 242 PIRSF PIRSF039085 1 242 9.0E-119 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BEN31_16945 3016e93bb8818550a072d0656b0d792f 242 SUPERFAMILY SSF52540 3 237 5.58E-81 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16945 3016e93bb8818550a072d0656b0d792f 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16945 3016e93bb8818550a072d0656b0d792f 242 SMART SM00382 28 223 4.2E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_16945 3016e93bb8818550a072d0656b0d792f 242 Pfam PF00005 ABC transporter 19 167 9.7E-37 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16945 3016e93bb8818550a072d0656b0d792f 242 Gene3D G3DSA:3.40.50.300 3 242 2.0E-81 T 12-10-2018 BEN31_10685 fff9dee49337f64f9ac3b9dd5f3b7e43 391 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 252 9.4E-83 T 12-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 BEN31_10685 fff9dee49337f64f9ac3b9dd5f3b7e43 391 SUPERFAMILY SSF56300 1 324 7.4E-55 T 12-10-2018 BEN31_10685 fff9dee49337f64f9ac3b9dd5f3b7e43 391 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 365 3.1E-6 T 12-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain BEN31_10685 fff9dee49337f64f9ac3b9dd5f3b7e43 391 Gene3D G3DSA:3.60.21.10 1 272 1.8E-79 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_10685 fff9dee49337f64f9ac3b9dd5f3b7e43 391 Pfam PF00149 Calcineurin-like phosphoesterase 1 223 3.2E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_09025 afe658292c20e273b02505721c021cf8 71 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 40 63 2.5E-11 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BEN31_09025 afe658292c20e273b02505721c021cf8 71 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 40 62 4.3E-12 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BEN31_07170 89a5b75be96c1e529e6b686e831fb154 422 Gene3D G3DSA:2.60.40.1180 38 419 8.8E-171 T 12-10-2018 IPR013780 Glycosyl hydrolase, all-beta BEN31_07170 89a5b75be96c1e529e6b686e831fb154 422 SUPERFAMILY SSF51011 326 421 2.16E-25 T 12-10-2018 BEN31_07170 89a5b75be96c1e529e6b686e831fb154 422 Gene3D G3DSA:3.20.20.80 49 330 8.8E-171 T 12-10-2018 BEN31_07170 89a5b75be96c1e529e6b686e831fb154 422 SUPERFAMILY SSF51445 48 330 1.16E-50 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_07170 89a5b75be96c1e529e6b686e831fb154 422 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 333 418 1.1E-5 T 12-10-2018 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 228 241 4.6E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 179 198 4.6E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 PRINTS PR00723 Subtilisin serine protease family (S8) signature 530 546 4.6E-22 T 12-10-2018 IPR015500 Peptidase S8, subtilisin-related BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 Gene3D G3DSA:3.50.30.30 358 474 5.1E-28 T 12-10-2018 BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 Pfam PF05922 Peptidase inhibitor I9 57 141 2.0E-10 T 12-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 531 541 - T 12-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 Gene3D G3DSA:3.30.70.80 49 141 2.2E-5 T 12-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 Gene3D G3DSA:2.60.40.4070 717 799 2.9E-8 T 12-10-2018 BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 Pfam PF13860 FlgD Ig-like domain 726 788 7.2E-7 T 12-10-2018 IPR025965 FlgD Ig-like domain BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 Pfam PF02225 PA domain 382 460 8.5E-14 T 12-10-2018 IPR003137 PA domain BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 184 195 - T 12-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 232 242 - T 12-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 Pfam PF00082 Subtilase family 179 585 8.8E-78 T 12-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 SUPERFAMILY SSF52025 372 507 2.22E-17 T 12-10-2018 BEN31_17095 2d428d1fb9684fdf67226a9cb33a6aa6 807 SUPERFAMILY SSF52743 105 598 2.49E-83 T 12-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 BEN31_15410 94d9cccaea9dfb8e95e9ac1fe1186cb4 86 SUPERFAMILY SSF55174 1 76 9.68E-20 T 12-10-2018 BEN31_15410 94d9cccaea9dfb8e95e9ac1fe1186cb4 86 Pfam PF01479 S4 domain 1 47 1.9E-10 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15410 94d9cccaea9dfb8e95e9ac1fe1186cb4 86 Gene3D G3DSA:3.10.290.10 1 86 1.7E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_15410 94d9cccaea9dfb8e95e9ac1fe1186cb4 86 SMART SM00363 1 63 2.3E-8 T 12-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15410 94d9cccaea9dfb8e95e9ac1fe1186cb4 86 PIRSF PIRSF038881 1 86 1.2E-34 T 12-10-2018 IPR025490 RNA-binding protein, HP1423 type BEN31_10535 40103ad6d374edbf27b9f6e12204679e 285 Pfam PF13673 Acetyltransferase (GNAT) domain 31 121 5.9E-8 T 12-10-2018 IPR000182 GNAT domain BEN31_10535 40103ad6d374edbf27b9f6e12204679e 285 Gene3D G3DSA:3.40.630.30 6 123 3.4E-14 T 12-10-2018 BEN31_10535 40103ad6d374edbf27b9f6e12204679e 285 Gene3D G3DSA:3.40.630.90 144 284 9.7E-6 T 12-10-2018 BEN31_10535 40103ad6d374edbf27b9f6e12204679e 285 SUPERFAMILY SSF55729 7 265 3.64E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_14135 1f8044d17637e1ab9531c02113e0725f 257 Gene3D G3DSA:3.40.50.1820 3 245 4.0E-39 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_14135 1f8044d17637e1ab9531c02113e0725f 257 SUPERFAMILY SSF53474 10 245 2.13E-34 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_14135 1f8044d17637e1ab9531c02113e0725f 257 Pfam PF12697 Alpha/beta hydrolase family 14 232 5.3E-16 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_05850 544a387de619accebe8ec63038a6a6a3 294 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 1 280 5.0E-111 T 12-10-2018 BEN31_05850 544a387de619accebe8ec63038a6a6a3 294 Pfam PF14045 YIEGIA protein 8 287 2.4E-125 T 12-10-2018 IPR025918 YIEGIA protein BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 Pfam PF00294 pfkB family carbohydrate kinase 13 285 4.5E-60 T 12-10-2018 IPR011611 Carbohydrate kinase PfkB BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 SUPERFAMILY SSF53613 1 301 1.48E-67 T 12-10-2018 IPR029056 Ribokinase-like BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 PIRSF PIRSF000535 1 303 3.6E-104 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.9E-107 T 12-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 8.0E-109 T 12-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 Gene3D G3DSA:3.40.1190.20 1 303 4.0E-108 T 12-10-2018 IPR029056 Ribokinase-like BEN31_09105 7d88aca2fdf745134e232c9d978fb326 303 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 12-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 BEN31_00370 78cbd9d5874bffe820b54ed26c1d8c6a 71 Pfam PF13744 Helix-turn-helix domain 3 55 1.7E-10 T 12-10-2018 IPR039554 HigA2-like, helix-turn-helix domain BEN31_00370 78cbd9d5874bffe820b54ed26c1d8c6a 71 Gene3D G3DSA:1.10.260.40 1 63 3.7E-12 T 12-10-2018 BEN31_00370 78cbd9d5874bffe820b54ed26c1d8c6a 71 SMART SM00530 7 63 4.1E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00370 78cbd9d5874bffe820b54ed26c1d8c6a 71 SUPERFAMILY SSF47413 4 59 2.95E-13 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 SUPERFAMILY SSF82171 14 391 1.96E-36 T 12-10-2018 BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 Pfam PF07676 WD40-like Beta Propeller Repeat 57 85 0.037 T 12-10-2018 IPR011659 WD40-like Beta Propeller BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 Pfam PF07676 WD40-like Beta Propeller Repeat 19 31 0.23 T 12-10-2018 IPR011659 WD40-like Beta Propeller BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 Gene3D G3DSA:2.120.10.30 166 400 5.4E-16 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 Pfam PF00326 Prolyl oligopeptidase family 446 655 1.6E-53 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 Gene3D G3DSA:3.40.50.1820 401 656 7.4E-72 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 SUPERFAMILY SSF53474 399 655 1.06E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_01555 d5981934c208916cfad98936c8ffc82e 656 Gene3D G3DSA:2.120.10.30 5 150 8.5E-21 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 148 2.0E-72 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.345 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 8.0E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 8.0E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 8.0E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 8.0E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 8.0E-40 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 Gene3D G3DSA:3.30.1360.80 1 157 2.0E-62 T 12-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 SUPERFAMILY SSF63411 4 150 1.92E-58 T 12-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 150 4.2E-51 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_02505 5bddd2e223d68f64a0c91cac15c429e1 157 PIRSF PIRSF006160 1 156 1.9E-60 T 12-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 SMART SM00065 238 373 2.4E-10 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 SUPERFAMILY SSF55781 243 364 3.92E-8 T 12-10-2018 BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 576 9.1E-8 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 Pfam PF01590 GAF domain 240 361 2.3E-5 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 Pfam PF06580 Histidine kinase 378 456 5.1E-23 T 12-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 SUPERFAMILY SSF55874 433 575 4.58E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 Gene3D G3DSA:3.30.565.10 433 577 6.2E-15 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03345 5723e6e7ef0a4ef5fa3ac245154dbcf6 585 Pfam PF07694 5TMR of 5TMR-LYT 26 207 1.1E-59 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BEN31_05015 c49726e6aec41559e5c54c51347795c4 448 Gene3D G3DSA:3.90.1150.10 73 443 3.6E-164 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_05015 c49726e6aec41559e5c54c51347795c4 448 Pfam PF02347 Glycine cleavage system P-protein 3 442 6.1E-168 T 12-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 BEN31_05015 c49726e6aec41559e5c54c51347795c4 448 SUPERFAMILY SSF53383 3 443 1.43E-120 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_05015 c49726e6aec41559e5c54c51347795c4 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 50.072 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 BEN31_05015 c49726e6aec41559e5c54c51347795c4 448 PIRSF PIRSF006815 3 447 2.6E-187 T 12-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 BEN31_05015 c49726e6aec41559e5c54c51347795c4 448 Gene3D G3DSA:3.40.640.10 84 349 3.6E-164 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_08230 fdc718c27be1b8043c74ca3fa1dd196d 181 Pfam PF00227 Proteasome subunit 5 178 1.0E-26 T 12-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 BEN31_08230 fdc718c27be1b8043c74ca3fa1dd196d 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 180 40.612 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BEN31_08230 fdc718c27be1b8043c74ca3fa1dd196d 181 SUPERFAMILY SSF56235 4 180 6.11E-60 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_08230 fdc718c27be1b8043c74ca3fa1dd196d 181 PIRSF PIRSF039093 1 181 3.7E-84 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BEN31_08230 fdc718c27be1b8043c74ca3fa1dd196d 181 Gene3D G3DSA:3.60.20.10 2 181 9.3E-68 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_08230 fdc718c27be1b8043c74ca3fa1dd196d 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 180 1.0E-81 T 12-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 BEN31_08210 cb274f2391ecd4f376e7bc348eef89a3 150 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN31_08210 cb274f2391ecd4f376e7bc348eef89a3 150 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 99 147 5.4E-12 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN31_08210 cb274f2391ecd4f376e7bc348eef89a3 150 Pfam PF00460 Flagella basal body rod protein 9 37 1.0E-10 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN31_08210 cb274f2391ecd4f376e7bc348eef89a3 150 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 5 150 3.5E-49 T 12-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 BEN31_17920 d815bda9df1b0497ffa82b6faa930480 130 Pfam PF05025 RbsD / FucU transport protein family 1 129 2.6E-45 T 12-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BEN31_17920 d815bda9df1b0497ffa82b6faa930480 130 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 130 30.964 T 12-10-2018 IPR023064 D-ribose pyranase GO:0016872 BEN31_17920 d815bda9df1b0497ffa82b6faa930480 130 Gene3D G3DSA:3.40.1650.10 8 126 3.7E-35 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BEN31_17920 d815bda9df1b0497ffa82b6faa930480 130 SUPERFAMILY SSF102546 1 130 1.83E-42 T 12-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 BEN31_12555 fce60cfd3b2d1a671c2d696a6915981b 526 Pfam PF01645 Conserved region in glutamate synthase 119 493 9.6E-114 T 12-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 BEN31_12555 fce60cfd3b2d1a671c2d696a6915981b 526 PIRSF PIRSF500060 1 524 8.8E-213 T 12-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria BEN31_12555 fce60cfd3b2d1a671c2d696a6915981b 526 PIRSF PIRSF006429 1 524 4.6E-163 T 12-10-2018 IPR024188 Glutamate synthase large subunit-like protein BEN31_12555 fce60cfd3b2d1a671c2d696a6915981b 526 Gene3D G3DSA:3.20.20.70 119 519 1.7E-101 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_12555 fce60cfd3b2d1a671c2d696a6915981b 526 SUPERFAMILY SSF51395 10 510 1.31E-109 T 12-10-2018 BEN31_09055 54dd227303f6a21ff020ac642a8955f9 222 Pfam PF02254 TrkA-N domain 5 120 1.3E-28 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BEN31_09055 54dd227303f6a21ff020ac642a8955f9 222 Gene3D G3DSA:3.40.50.720 1 137 1.4E-38 T 12-10-2018 BEN31_09055 54dd227303f6a21ff020ac642a8955f9 222 Pfam PF02080 TrkA-C domain 150 215 2.9E-15 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BEN31_09055 54dd227303f6a21ff020ac642a8955f9 222 Gene3D G3DSA:3.30.70.1450 138 218 2.8E-27 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_09055 54dd227303f6a21ff020ac642a8955f9 222 SUPERFAMILY SSF51735 4 134 9.46E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_09055 54dd227303f6a21ff020ac642a8955f9 222 SUPERFAMILY SSF116726 131 215 6.93E-22 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_11895 494c87f9e32d38438fefbbe2fa962cb9 394 Pfam PF12395 Protein of unknown function 161 272 6.4E-33 T 12-10-2018 IPR022123 Protein of unknown function DUF3658 BEN31_11895 494c87f9e32d38438fefbbe2fa962cb9 394 Pfam PF08874 Domain of unknown function (DUF1835) 2 123 8.9E-35 T 12-10-2018 IPR014973 Protein of unknown function DUF1835 BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 SMART SM00382 28 211 2.1E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 SUPERFAMILY SSF50331 237 358 5.67E-12 T 12-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 SUPERFAMILY SSF52540 4 241 2.52E-89 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 Gene3D G3DSA:2.40.50.940 222 357 4.7E-13 T 12-10-2018 BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 Gene3D G3DSA:2.40.50.140 287 349 4.7E-13 T 12-10-2018 BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 Pfam PF00005 ABC transporter 19 161 1.2E-35 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 Pfam PF08402 TOBE domain 280 357 1.4E-13 T 12-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 34 355 4.0E-118 T 12-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 Gene3D G3DSA:3.40.50.300 4 221 1.1E-68 T 12-10-2018 BEN31_13920 f12e4e81dc25233340675a18c06d1af4 363 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_03250 fa0c8024e2d7d1740f853c00706398ec 423 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 307 326 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BEN31_03250 fa0c8024e2d7d1740f853c00706398ec 423 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 422 2.3E-225 T 12-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 BEN31_03250 fa0c8024e2d7d1740f853c00706398ec 423 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 417 2.5E-125 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_03250 fa0c8024e2d7d1740f853c00706398ec 423 SMART SM01329 21 418 5.3E-187 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_03250 fa0c8024e2d7d1740f853c00706398ec 423 Gene3D G3DSA:3.40.718.10 1 423 7.9E-184 T 12-10-2018 BEN31_03250 fa0c8024e2d7d1740f853c00706398ec 423 SUPERFAMILY SSF53659 3 422 2.88E-142 T 12-10-2018 BEN31_07675 e5df6b7b32cf62a8988faba7b31a6d9a 133 Pfam PF12788 YmaF family 14 66 3.0E-9 T 12-10-2018 IPR024307 YmaF BEN31_06300 89f3ef1e8225529518a338f198236413 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 12-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 BEN31_06300 89f3ef1e8225529518a338f198236413 160 Gene3D G3DSA:3.40.30.10 1 160 6.2E-71 T 12-10-2018 BEN31_06300 89f3ef1e8225529518a338f198236413 160 SUPERFAMILY SSF52833 1 158 1.6E-62 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_06300 89f3ef1e8225529518a338f198236413 160 Pfam PF00255 Glutathione peroxidase 3 109 1.2E-42 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN31_06300 89f3ef1e8225529518a338f198236413 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 12-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 BEN31_06300 89f3ef1e8225529518a338f198236413 160 PIRSF PIRSF000303 1 160 1.1E-68 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN31_06300 89f3ef1e8225529518a338f198236413 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 5.9E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN31_06300 89f3ef1e8225529518a338f198236413 160 PRINTS PR01011 Glutathione peroxidase family signature 56 72 5.9E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN31_06300 89f3ef1e8225529518a338f198236413 160 PRINTS PR01011 Glutathione peroxidase family signature 21 38 5.9E-20 T 12-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 BEN31_14090 fb87ebe6ddd34aa28478e92aa9bfd5ba 348 Gene3D G3DSA:3.30.360.10 118 343 1.2E-31 T 12-10-2018 BEN31_14090 fb87ebe6ddd34aa28478e92aa9bfd5ba 348 SUPERFAMILY SSF51735 3 148 8.24E-44 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_14090 fb87ebe6ddd34aa28478e92aa9bfd5ba 348 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 130 216 2.9E-18 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BEN31_14090 fb87ebe6ddd34aa28478e92aa9bfd5ba 348 Gene3D G3DSA:3.40.50.720 2 117 6.3E-31 T 12-10-2018 BEN31_14090 fb87ebe6ddd34aa28478e92aa9bfd5ba 348 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 9.7E-26 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BEN31_14090 fb87ebe6ddd34aa28478e92aa9bfd5ba 348 SUPERFAMILY SSF55347 128 271 5.89E-20 T 12-10-2018 BEN31_15880 8f674a22327dc3f003c02f126bf775f8 505 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 208 6.8E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_15880 8f674a22327dc3f003c02f126bf775f8 505 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 235 500 1.7E-61 T 12-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 BEN31_15880 8f674a22327dc3f003c02f126bf775f8 505 Gene3D G3DSA:3.40.190.120 339 442 5.5E-93 T 12-10-2018 BEN31_15880 8f674a22327dc3f003c02f126bf775f8 505 SUPERFAMILY SSF161098 14 198 1.44E-42 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_15880 8f674a22327dc3f003c02f126bf775f8 505 Gene3D G3DSA:3.40.190.10 246 503 5.5E-93 T 12-10-2018 BEN31_15880 8f674a22327dc3f003c02f126bf775f8 505 Gene3D G3DSA:1.10.3720.10 12 205 5.1E-35 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_15880 8f674a22327dc3f003c02f126bf775f8 505 SUPERFAMILY SSF53850 235 503 1.47E-70 T 12-10-2018 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 Pfam PF00700 Bacterial flagellin C-terminal helical region 232 316 1.1E-32 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 PRINTS PR00207 Flagellin signature 35 52 1.5E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 PRINTS PR00207 Flagellin signature 74 93 1.5E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 PRINTS PR00207 Flagellin signature 110 133 1.5E-24 T 12-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 Gene3D G3DSA:1.20.1330.10 43 142 1.6E-56 T 12-10-2018 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 8.0E-43 T 12-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 Gene3D G3DSA:1.20.1330.10 225 268 1.5E-17 T 12-10-2018 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 Gene3D G3DSA:2.170.280.10 203 224 1.5E-17 T 12-10-2018 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 SUPERFAMILY SSF64518 1 317 4.45E-94 T 12-10-2018 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 Gene3D G3DSA:1.10.8.410 269 317 3.2E-29 T 12-10-2018 BEN31_10055 501adc3d852df2533b4876be09e8328e 317 Gene3D G3DSA:1.20.58.1830 3 31 1.6E-56 T 12-10-2018 BEN31_08790 47fc7c78e95030267c86293dcacd8b14 172 Pfam PF02620 Uncharacterized ACR, COG1399 56 165 7.6E-24 T 12-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD BEN31_11375 15ed346c56f4a9ad8391d072336d4e6e 157 SUPERFAMILY SSF75217 3 155 4.25E-45 T 12-10-2018 IPR029028 Alpha/beta knot methyltransferases BEN31_11375 15ed346c56f4a9ad8391d072336d4e6e 157 Pfam PF00588 SpoU rRNA Methylase family 3 145 4.1E-33 T 12-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 BEN31_11375 15ed346c56f4a9ad8391d072336d4e6e 157 Gene3D G3DSA:3.40.1280.10 2 157 5.3E-67 T 12-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal BEN31_11375 15ed346c56f4a9ad8391d072336d4e6e 157 PIRSF PIRSF029256 2 157 8.4E-68 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BEN31_11375 15ed346c56f4a9ad8391d072336d4e6e 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 3 156 4.9E-70 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BEN31_11375 15ed346c56f4a9ad8391d072336d4e6e 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 154 34.223 T 12-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 BEN31_16520 71a958c00936408fee695199efe7dc24 145 Gene3D G3DSA:1.10.10.10 5 143 5.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16520 71a958c00936408fee695199efe7dc24 145 SMART SM00418 27 118 0.0062 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_16520 71a958c00936408fee695199efe7dc24 145 SUPERFAMILY SSF46785 10 140 7.39E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_16520 71a958c00936408fee695199efe7dc24 145 SMART SM00347 25 125 9.4E-31 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_16520 71a958c00936408fee695199efe7dc24 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_16520 71a958c00936408fee695199efe7dc24 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_16520 71a958c00936408fee695199efe7dc24 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_16520 71a958c00936408fee695199efe7dc24 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.1E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_16520 71a958c00936408fee695199efe7dc24 145 Pfam PF01047 MarR family 32 89 2.1E-17 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 Gene3D G3DSA:3.90.1530.30 37 99 1.3E-28 T 12-10-2018 BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 20 198 4.8E-68 T 12-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 SUPERFAMILY SSF110849 24 115 1.41E-27 T 12-10-2018 IPR036086 ParB/Sulfiredoxin superfamily BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 SUPERFAMILY SSF109709 106 216 7.85E-37 T 12-10-2018 BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 Pfam PF08535 KorB domain 136 215 1.8E-5 T 12-10-2018 IPR013741 Repressor KorB domain BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 Gene3D G3DSA:1.10.10.2830 101 214 1.7E-38 T 12-10-2018 BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 SMART SM00470 24 113 4.0E-37 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BEN31_15825 d045bc97d7e9355deed6fa7970fa60e1 284 Pfam PF02195 ParB-like nuclease domain 24 112 1.4E-26 T 12-10-2018 IPR003115 ParB/Sulfiredoxin BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 Gene3D G3DSA:3.50.50.60 5 341 2.7E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 463 3.4E-37 T 12-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 335 2.8E-64 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 SUPERFAMILY SSF55424 351 473 2.75E-39 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 12-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 315 322 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 416 431 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 438 458 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 351 372 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.0E-68 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 Gene3D G3DSA:3.50.50.60 159 282 2.7E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 SUPERFAMILY SSF51905 2 345 1.44E-59 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.8E-36 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 1.8E-36 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.8E-36 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-36 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 322 1.8E-36 T 12-10-2018 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 474 1.4E-180 T 12-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 Gene3D G3DSA:3.30.390.30 354 474 4.7E-46 T 12-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 BEN31_05230 a1083e0dda8fd4140e58632389e07b3a 474 PIRSF PIRSF000350 1 472 5.2E-86 T 12-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 Pfam PF07690 Major Facilitator Superfamily 24 360 5.3E-46 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 13 393 3.8E-98 T 12-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 SUPERFAMILY SSF103473 8 403 4.45E-62 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 PRINTS PR01035 Tetracycline resistance protein signature 284 305 5.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 PRINTS PR01035 Tetracycline resistance protein signature 111 132 5.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 PRINTS PR01035 Tetracycline resistance protein signature 27 43 5.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 PRINTS PR01035 Tetracycline resistance protein signature 171 191 5.4E-7 T 12-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 BEN31_14365 1610e507de2fde8c8f27cdafede795fa 405 Gene3D G3DSA:1.20.1720.10 17 395 2.0E-99 T 12-10-2018 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 SMART SM00567 E-Z type HEAT repeats 330 359 2.5E-5 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 SMART SM00567 E-Z type HEAT repeats 298 327 49.0 T 12-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 1.4E-17 T 12-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 Gene3D G3DSA:1.25.10.10 265 379 1.1E-12 T 12-10-2018 IPR011989 Armadillo-like helical BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 342 3.2E-125 T 12-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 12-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 SUPERFAMILY SSF54862 164 250 3.64E-13 T 12-10-2018 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 Pfam PF13646 HEAT repeats 300 372 2.0E-14 T 12-10-2018 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 Pfam PF13484 4Fe-4S double cluster binding domain 187 250 6.9E-17 T 12-10-2018 BEN31_11385 bc45114c659ca8c1191ab275544a6c24 382 SUPERFAMILY SSF48371 286 371 1.95E-13 T 12-10-2018 IPR016024 Armadillo-type fold BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 Pfam PF06574 FAD synthetase 14 168 3.7E-51 T 12-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 Pfam PF01687 Riboflavin kinase 186 310 4.0E-36 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 SUPERFAMILY SSF52374 20 185 2.25E-32 T 12-10-2018 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 312 2.9E-107 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 SUPERFAMILY SSF82114 175 313 6.98E-45 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 Gene3D G3DSA:2.40.30.30 188 321 5.3E-41 T 12-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 88 1.9E-9 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 PIRSF PIRSF004491 3 319 7.0E-110 T 12-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 SMART SM00904 185 312 5.8E-61 T 12-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 BEN31_07945 cfd09840445eafd62ddbab44f606f94a 321 Gene3D G3DSA:3.40.50.620 5 187 9.4E-60 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_04605 1ff7019cacc3194948c021b4dcb4523d 437 Gene3D G3DSA:2.40.50.140 370 437 5.9E-6 T 12-10-2018 BEN31_04605 1ff7019cacc3194948c021b4dcb4523d 437 Pfam PF01972 Serine dehydrogenase proteinase 62 125 1.2E-9 T 12-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 BEN31_04605 1ff7019cacc3194948c021b4dcb4523d 437 Gene3D G3DSA:3.90.226.10 26 235 6.1E-50 T 12-10-2018 BEN31_04605 1ff7019cacc3194948c021b4dcb4523d 437 SUPERFAMILY SSF52096 14 192 2.82E-28 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_04605 1ff7019cacc3194948c021b4dcb4523d 437 Pfam PF01957 NfeD-like C-terminal, partner-binding 289 436 3.3E-17 T 12-10-2018 IPR002810 NfeD-like, C-terminal domain BEN31_01655 3f43299441317df992e8cec06bde3402 378 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 2.3E-84 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BEN31_01655 3f43299441317df992e8cec06bde3402 378 Gene3D G3DSA:3.40.50.720 129 305 4.8E-141 T 12-10-2018 BEN31_01655 3f43299441317df992e8cec06bde3402 378 Gene3D G3DSA:3.40.50.720 3 353 4.8E-141 T 12-10-2018 BEN31_01655 3f43299441317df992e8cec06bde3402 378 PIRSF PIRSF000183 1 371 1.7E-189 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BEN31_01655 3f43299441317df992e8cec06bde3402 378 SUPERFAMILY SSF52283 1 360 1.36E-65 T 12-10-2018 BEN31_01655 3f43299441317df992e8cec06bde3402 378 SMART SM01003 4 136 6.1E-77 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BEN31_01655 3f43299441317df992e8cec06bde3402 378 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 12-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 BEN31_01655 3f43299441317df992e8cec06bde3402 378 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 1.4E-47 T 12-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal BEN31_01655 3f43299441317df992e8cec06bde3402 378 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.7E-191 T 12-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 BEN31_01655 3f43299441317df992e8cec06bde3402 378 SMART SM01002 148 297 6.5E-89 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BEN31_01655 3f43299441317df992e8cec06bde3402 378 SUPERFAMILY SSF51735 136 303 1.27E-48 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_03985 5ec4ea0bd8bc9b185a40845ef96bde03 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.1E-59 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BEN31_03985 5ec4ea0bd8bc9b185a40845ef96bde03 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.366 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BEN31_03985 5ec4ea0bd8bc9b185a40845ef96bde03 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 3.2E-66 T 12-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 BEN31_03985 5ec4ea0bd8bc9b185a40845ef96bde03 147 SUPERFAMILY SSF69500 1 145 3.01E-59 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BEN31_03985 5ec4ea0bd8bc9b185a40845ef96bde03 147 Gene3D G3DSA:3.50.80.10 1 147 1.1E-61 T 12-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily BEN31_05600 1697ec551f25b58fa11eb68cbf6fe8e1 490 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 19 476 4.3E-155 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_05600 1697ec551f25b58fa11eb68cbf6fe8e1 490 PIRSF PIRSF005690 3 489 2.7E-142 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 56.094 T 12-10-2018 IPR023009 Tyrosine recombinase XerC/XerD BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 Gene3D G3DSA:1.10.150.130 2 97 8.6E-23 T 12-10-2018 IPR010998 Integrase/recombinase, N-terminal BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 Gene3D G3DSA:1.10.443.10 110 290 1.8E-69 T 12-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 Pfam PF00589 Phage integrase family 111 282 6.0E-56 T 12-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 296 1.7E-101 T 12-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 296 3.5E-121 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 296 62.852 T 12-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 89 6.7E-20 T 12-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 BEN31_05535 bbad4d4917a41a56217e156169fba40a 296 SUPERFAMILY SSF56349 7 289 2.85E-60 T 12-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 BEN31_01370 8578b110a414665b512fc44038814fab 122 Pfam PF02627 Carboxymuconolactone decarboxylase family 29 110 8.1E-17 T 12-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN31_01370 8578b110a414665b512fc44038814fab 122 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 47 96 1.2E-7 T 12-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 BEN31_01370 8578b110a414665b512fc44038814fab 122 SUPERFAMILY SSF69118 3 118 2.36E-27 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN31_01370 8578b110a414665b512fc44038814fab 122 Gene3D G3DSA:1.20.1290.10 1 118 1.2E-29 T 12-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 SUPERFAMILY SSF51735 2 188 4.84E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 2.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.6E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 Pfam PF00106 short chain dehydrogenase 4 187 5.7E-29 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14130 696eace3bed8ae47b52fdff2a3bf5ded 240 Gene3D G3DSA:3.40.50.720 1 223 1.9E-33 T 12-10-2018 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 424 4.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 405 4.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 358 372 4.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 386 4.2E-10 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 SMART SM00388 211 279 2.3E-11 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 Pfam PF07694 5TMR of 5TMR-LYT 34 148 4.7E-6 T 12-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 SMART SM00387 320 427 6.7E-30 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 SUPERFAMILY SSF47384 198 277 2.35E-13 T 12-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 SUPERFAMILY SSF55874 271 424 3.01E-36 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 426 8.9E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 Gene3D G3DSA:1.10.287.130 197 274 2.1E-18 T 12-10-2018 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 213 276 2.2E-12 T 12-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 BEN31_01895 2d3ee0e62d5af188820ba7d2e4dea150 430 Gene3D G3DSA:3.30.565.10 275 425 1.6E-38 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13410 383f574372b2a08f8e2cb107f1105e91 106 Pfam PF00085 Thioredoxin 5 101 2.2E-18 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN31_13410 383f574372b2a08f8e2cb107f1105e91 106 Gene3D G3DSA:3.40.30.10 1 105 5.9E-25 T 12-10-2018 BEN31_13410 383f574372b2a08f8e2cb107f1105e91 106 SUPERFAMILY SSF52833 3 104 5.84E-26 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 2.1E-15 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 Gene3D G3DSA:3.40.50.720 1 161 9.4E-32 T 12-10-2018 BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 PIRSF PIRSF000193 1 266 3.6E-69 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 Gene3D G3DSA:1.10.3730.10 162 265 2.8E-14 T 12-10-2018 BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 267 16.207 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 97 4.3E-15 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 SUPERFAMILY SSF48179 158 266 1.7E-17 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_09800 9923a1a0ac64a66b55cdcd6241eb3255 274 SUPERFAMILY SSF51735 3 159 3.7E-19 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07820 f9d2aa5e75422626574b378a8d52bea0 263 PIRSF PIRSF021288 1 262 1.2E-145 T 12-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain BEN31_07820 f9d2aa5e75422626574b378a8d52bea0 263 SUPERFAMILY SSF55021 6 73 7.08E-7 T 12-10-2018 BEN31_07820 f9d2aa5e75422626574b378a8d52bea0 263 Pfam PF11868 Protein of unknown function (DUF3388) 72 261 2.4E-106 T 12-10-2018 IPR024514 Domain of unknown function DUF3388 BEN31_10915 4a0e7165065c269a1877a74e03540e05 406 Pfam PF05975 Bacterial ABC transporter protein EcsB 7 387 1.3E-125 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 BEN31_10915 4a0e7165065c269a1877a74e03540e05 406 PIRSF PIRSF037259 3 406 1.3E-127 T 12-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 BEN31_17570 2a3620970e0b599026b7dec665822a32 184 Pfam PF02659 Putative manganese efflux pump 34 181 7.3E-40 T 12-10-2018 IPR003810 Putative manganese efflux pump BEN31_17570 2a3620970e0b599026b7dec665822a32 184 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 6 184 21.493 T 12-10-2018 IPR022929 Putative manganese efflux pump MntP BEN31_08040 9baddaf57673f0c545b7e6d86b1721dd 185 Gene3D G3DSA:1.10.132.20 12 182 1.8E-70 T 12-10-2018 BEN31_08040 9baddaf57673f0c545b7e6d86b1721dd 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.977 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BEN31_08040 9baddaf57673f0c545b7e6d86b1721dd 185 SUPERFAMILY SSF55194 3 185 4.58E-73 T 12-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 BEN31_08040 9baddaf57673f0c545b7e6d86b1721dd 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.9E-80 T 12-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 BEN31_08040 9baddaf57673f0c545b7e6d86b1721dd 185 Gene3D G3DSA:3.30.1360.40 31 105 1.8E-70 T 12-10-2018 BEN31_08040 9baddaf57673f0c545b7e6d86b1721dd 185 Pfam PF01765 Ribosome recycling factor 22 183 2.8E-66 T 12-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 ProSitePatterns PS00480 Citrate synthase signature. 259 272 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 SUPERFAMILY SSF48256 6 367 1.31E-113 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 PRINTS PR00143 Citrate synthase signature 177 192 2.0E-32 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 PRINTS PR00143 Citrate synthase signature 310 326 2.0E-32 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 PRINTS PR00143 Citrate synthase signature 330 344 2.0E-32 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 PRINTS PR00143 Citrate synthase signature 128 141 2.0E-32 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 PRINTS PR00143 Citrate synthase signature 199 227 2.0E-32 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 PRINTS PR00143 Citrate synthase signature 252 272 2.0E-32 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 Pfam PF00285 Citrate synthase, C-terminal domain 10 360 3.6E-108 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 Gene3D G3DSA:1.10.580.10 32 357 1.8E-106 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 Gene3D G3DSA:1.10.230.10 225 324 1.8E-106 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BEN31_06675 b2857cccc079b269474fc8cd7f77b1b0 380 PIRSF PIRSF001369 1 377 1.9E-127 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type BEN31_17580 9feedb3508ace7d5a8a6d02860c3ff23 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 147 4.2E-62 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN31_17580 9feedb3508ace7d5a8a6d02860c3ff23 149 PIRSF PIRSF005384 1 148 2.6E-57 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN31_17580 9feedb3508ace7d5a8a6d02860c3ff23 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 4.4E-50 T 12-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 BEN31_17580 9feedb3508ace7d5a8a6d02860c3ff23 149 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.5E-54 T 12-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN31_17580 9feedb3508ace7d5a8a6d02860c3ff23 149 Gene3D G3DSA:3.40.1400.10 1 148 2.2E-58 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN31_17580 9feedb3508ace7d5a8a6d02860c3ff23 149 SUPERFAMILY SSF89623 1 148 4.45E-57 T 12-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 BEN31_17575 6277bf31e0493698622fc1852cdebee3 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 141 6.2E-36 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN31_17575 6277bf31e0493698622fc1852cdebee3 152 SMART SM00226 1 144 2.7E-42 T 12-10-2018 IPR023485 Phosphotyrosine protein phosphatase I BEN31_17575 6277bf31e0493698622fc1852cdebee3 152 SUPERFAMILY SSF52788 1 145 5.36E-38 T 12-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily BEN31_17575 6277bf31e0493698622fc1852cdebee3 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 3.5E-8 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN31_17575 6277bf31e0493698622fc1852cdebee3 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 3.5E-8 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN31_17575 6277bf31e0493698622fc1852cdebee3 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 76 91 3.5E-8 T 12-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 BEN31_17575 6277bf31e0493698622fc1852cdebee3 152 Gene3D G3DSA:3.40.50.2300 1 150 3.8E-57 T 12-10-2018 BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 SMART SM00387 318 429 1.8E-20 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 SUPERFAMILY SSF55874 286 426 3.01E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 325 428 2.6E-17 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 Gene3D G3DSA:3.30.565.10 284 435 9.7E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_01020 0561ea036b89c57513ac2aa9dac4301b 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.3E-9 T 12-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 BEN31_08370 e5c1e6ab6e8e699296ac689729ff1f48 300 Pfam PF03313 Serine dehydratase alpha chain 15 274 1.9E-77 T 12-10-2018 IPR005130 Serine dehydratase-like, alpha subunit BEN31_08370 e5c1e6ab6e8e699296ac689729ff1f48 300 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 299 7.1E-151 T 12-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 BEN31_01675 086d3fe11dffb067669200660e5ea6bd 437 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 28 385 7.1E-132 T 12-10-2018 IPR018778 Type VII secretion system EssB BEN31_01675 086d3fe11dffb067669200660e5ea6bd 437 Gene3D G3DSA:1.10.510.10 1 218 2.4E-78 T 12-10-2018 BEN31_01675 086d3fe11dffb067669200660e5ea6bd 437 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 8 385 1.3E-143 T 12-10-2018 IPR018778 Type VII secretion system EssB BEN31_01675 086d3fe11dffb067669200660e5ea6bd 437 Gene3D G3DSA:1.25.40.680 241 403 7.0E-43 T 12-10-2018 BEN31_07670 54d3b7f1a34b6e0e1f28598274dbcea1 318 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 309 30.576 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BEN31_07670 54d3b7f1a34b6e0e1f28598274dbcea1 318 Pfam PF01715 IPP transferase 41 284 2.6E-86 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BEN31_07670 54d3b7f1a34b6e0e1f28598274dbcea1 318 SUPERFAMILY SSF52540 8 163 1.16E-19 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07670 54d3b7f1a34b6e0e1f28598274dbcea1 318 Gene3D G3DSA:3.40.50.300 12 290 2.0E-107 T 12-10-2018 BEN31_07670 54d3b7f1a34b6e0e1f28598274dbcea1 318 SUPERFAMILY SSF52540 7 270 1.2E-7 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_07670 54d3b7f1a34b6e0e1f28598274dbcea1 318 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 293 9.8E-115 T 12-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 BEN31_07670 54d3b7f1a34b6e0e1f28598274dbcea1 318 Gene3D G3DSA:1.10.20.140 115 187 2.0E-107 T 12-10-2018 BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Gene3D G3DSA:2.170.120.30 42 145 3.8E-27 T 12-10-2018 BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Gene3D G3DSA:2.170.120.40 146 231 5.5E-9 T 12-10-2018 BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Gene3D G3DSA:2.170.120.40 234 320 1.9E-20 T 12-10-2018 BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Gene3D G3DSA:2.170.120.30 323 419 3.9E-18 T 12-10-2018 BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Pfam PF07949 YbbR-like protein 329 410 5.6E-7 T 12-10-2018 IPR012505 YbbR-like BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Pfam PF07949 YbbR-like protein 237 316 1.2E-16 T 12-10-2018 IPR012505 YbbR-like BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Pfam PF07949 YbbR-like protein 143 228 2.8E-15 T 12-10-2018 IPR012505 YbbR-like BEN31_14700 43295474466e383bc95d1be2d3bfe92f 469 Pfam PF07949 YbbR-like protein 55 135 1.3E-10 T 12-10-2018 IPR012505 YbbR-like BEN31_02690 67521f51cdeedba455dc54bdf5c72564 250 SUPERFAMILY SSF51735 1 246 4.45E-28 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_02690 67521f51cdeedba455dc54bdf5c72564 250 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 175 2.2E-13 T 12-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 BEN31_02690 67521f51cdeedba455dc54bdf5c72564 250 Gene3D G3DSA:3.40.50.720 1 238 1.4E-29 T 12-10-2018 BEN31_13775 b272c50bb9040336dc805a97f414c385 385 Pfam PF07687 Peptidase dimerisation domain 184 276 1.4E-11 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN31_13775 b272c50bb9040336dc805a97f414c385 385 SUPERFAMILY SSF55031 182 295 5.63E-30 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_13775 b272c50bb9040336dc805a97f414c385 385 Gene3D G3DSA:3.30.70.360 180 294 2.4E-132 T 12-10-2018 BEN31_13775 b272c50bb9040336dc805a97f414c385 385 Gene3D G3DSA:3.40.630.10 13 364 2.4E-132 T 12-10-2018 BEN31_13775 b272c50bb9040336dc805a97f414c385 385 SUPERFAMILY SSF53187 8 380 2.45E-81 T 12-10-2018 BEN31_13775 b272c50bb9040336dc805a97f414c385 385 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 367 8.0E-121 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_13775 b272c50bb9040336dc805a97f414c385 385 PIRSF PIRSF005962 3 383 4.4E-122 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_13775 b272c50bb9040336dc805a97f414c385 385 Pfam PF01546 Peptidase family M20/M25/M40 72 375 2.5E-35 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 20 432 1.3E-204 T 12-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 12-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 3.7E-77 T 12-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 12 433 1.6E-200 T 12-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 Gene3D G3DSA:3.40.50.12240 11 436 1.8E-153 T 12-10-2018 BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 SUPERFAMILY SSF52540 92 359 1.47E-94 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 SMART SM00382 157 338 1.4E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_08185 0c9da013d11ec07ca46a6dc61071339c 438 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 23 88 5.3E-6 T 12-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 SUPERFAMILY SSF51735 6 253 2.73E-83 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 1.9E-68 T 12-10-2018 BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 4.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 4.5E-38 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 Gene3D G3DSA:3.40.50.720 2 257 5.9E-80 T 12-10-2018 BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.8E-11 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_14215 718d1f867d7a3881879b9a7f722cde52 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_08035 7adb44c2d02bf8f35fa6285621dff472 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 38 258 1.4E-83 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BEN31_08035 7adb44c2d02bf8f35fa6285621dff472 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 31 259 40.632 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BEN31_08035 7adb44c2d02bf8f35fa6285621dff472 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 204 221 - T 12-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 BEN31_08035 7adb44c2d02bf8f35fa6285621dff472 260 Gene3D G3DSA:3.40.1180.10 13 260 6.6E-100 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BEN31_08035 7adb44c2d02bf8f35fa6285621dff472 260 SUPERFAMILY SSF64005 29 253 4.58E-89 T 12-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 BEN31_08035 7adb44c2d02bf8f35fa6285621dff472 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 31 258 2.8E-86 T 12-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 BEN31_18505 712276f689504c351a100646dae14478 1285 Pfam PF00932 Lamin Tail Domain 153 239 1.2E-11 T 12-10-2018 IPR001322 Lamin tail domain BEN31_18505 712276f689504c351a100646dae14478 1285 Pfam PF00149 Calcineurin-like phosphoesterase 929 1121 8.9E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_18505 712276f689504c351a100646dae14478 1285 Gene3D G3DSA:2.60.40.10 652 741 5.2E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_18505 712276f689504c351a100646dae14478 1285 Gene3D G3DSA:3.60.21.10 926 1145 3.2E-17 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_18505 712276f689504c351a100646dae14478 1285 SUPERFAMILY SSF56300 924 1172 1.04E-35 T 12-10-2018 BEN31_18505 712276f689504c351a100646dae14478 1285 SUPERFAMILY SSF74853 153 233 1.28E-5 T 12-10-2018 IPR036415 Lamin tail domain superfamily BEN31_15950 b958986153244385920f57cac3a19b2c 244 Gene3D G3DSA:3.40.50.1820 7 243 3.9E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_15950 b958986153244385920f57cac3a19b2c 244 SUPERFAMILY SSF53474 13 241 6.84E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_15950 b958986153244385920f57cac3a19b2c 244 Pfam PF00756 Putative esterase 14 237 7.9E-25 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BEN31_04080 e53b85f11a98648d38fa1eb45a184a74 354 Pfam PF01594 AI-2E family transporter 21 346 2.6E-74 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BEN31_17290 2ea5fbafc5e81e9e476f5445b9bf84d8 323 Gene3D G3DSA:3.40.50.10750 142 295 3.9E-135 T 12-10-2018 BEN31_17290 2ea5fbafc5e81e9e476f5445b9bf84d8 323 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 1.1E-132 T 12-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN31_17290 2ea5fbafc5e81e9e476f5445b9bf84d8 323 SUPERFAMILY SSF53659 4 322 1.48E-92 T 12-10-2018 BEN31_17290 2ea5fbafc5e81e9e476f5445b9bf84d8 323 PIRSF PIRSF000428 2 323 1.7E-110 T 12-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN31_17290 2ea5fbafc5e81e9e476f5445b9bf84d8 323 Gene3D G3DSA:3.40.50.10950 18 319 3.9E-135 T 12-10-2018 BEN31_17290 2ea5fbafc5e81e9e476f5445b9bf84d8 323 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 319 1.9E-130 T 12-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Gene3D G3DSA:2.40.50.140 629 736 3.8E-27 T 12-10-2018 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SMART SM00357 73 133 1.4E-11 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SMART SM00357 138 202 1.5E-9 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 58 708 3.0E-264 T 12-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SUPERFAMILY SSF50249 55 135 7.14E-19 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SUPERFAMILY SSF50249 208 625 9.0E-149 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 TIGRFAM TIGR02063 RNase_R: ribonuclease R 8 708 2.9E-287 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Pfam PF00575 S1 RNA binding domain 625 707 7.6E-16 T 12-10-2018 IPR003029 S1 domain GO:0003676 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Gene3D G3DSA:2.40.50.140 135 203 9.1E-11 T 12-10-2018 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Gene3D G3DSA:2.40.50.140 60 134 1.7E-19 T 12-10-2018 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SMART SM00316 626 708 4.9E-20 T 12-10-2018 IPR022967 RNA-binding domain, S1 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Pfam PF00773 RNB domain 248 576 5.9E-117 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SUPERFAMILY SSF50249 126 225 3.29E-21 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SMART SM00955 248 578 4.3E-184 T 12-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Pfam PF08206 Ribonuclease B OB domain 74 132 1.5E-21 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Pfam PF08206 Ribonuclease B OB domain 148 201 8.0E-9 T 12-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 ProSitePatterns PS01175 Ribonuclease II family signature. 545 569 - T 12-10-2018 IPR022966 Ribonuclease II/R, conserved site BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 Hamap MF_01895 Ribonuclease R [rnr]. 25 708 62.019 T 12-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 BEN31_00705 0c158e6ed97f43aa23caa50f7edd24d5 780 SUPERFAMILY SSF50249 628 707 1.12E-23 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_07355 88732fc76c5708bff8c879d934b5fb75 140 SUPERFAMILY SSF54637 6 131 4.58E-39 T 12-10-2018 IPR029069 HotDog domain superfamily BEN31_07355 88732fc76c5708bff8c879d934b5fb75 140 Gene3D G3DSA:3.10.129.10 3 128 2.1E-36 T 12-10-2018 BEN31_07355 88732fc76c5708bff8c879d934b5fb75 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 9.2E-36 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BEN31_07355 88732fc76c5708bff8c879d934b5fb75 140 PIRSF PIRSF003230 2 136 5.7E-32 T 12-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 BEN31_07355 88732fc76c5708bff8c879d934b5fb75 140 Pfam PF03061 Thioesterase superfamily 18 102 4.0E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN31_12735 db6586352cfdb978af2dec3158c27770 305 Pfam PF02915 Rubrerythrin 31 143 5.4E-10 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 BEN31_12735 db6586352cfdb978af2dec3158c27770 305 SUPERFAMILY SSF47240 177 299 5.98E-13 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_12735 db6586352cfdb978af2dec3158c27770 305 Pfam PF09968 Uncharacterized protein domain (DUF2202) 181 301 3.5E-5 T 12-10-2018 IPR019243 Domain of unknown function DUF2202 BEN31_12735 db6586352cfdb978af2dec3158c27770 305 Gene3D G3DSA:1.20.120.660 88 168 1.0E-7 T 12-10-2018 BEN31_12735 db6586352cfdb978af2dec3158c27770 305 Gene3D G3DSA:1.20.120.660 16 87 4.8E-8 T 12-10-2018 BEN31_12735 db6586352cfdb978af2dec3158c27770 305 SUPERFAMILY SSF47240 22 147 1.16E-25 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_12735 db6586352cfdb978af2dec3158c27770 305 Gene3D G3DSA:1.20.1260.10 175 304 1.0E-13 T 12-10-2018 IPR012347 Ferritin-like BEN31_17835 7356dff80a9f8eed2bbb2fa6e6354cc6 136 Pfam PF14183 YwpF-like protein 2 134 5.0E-48 T 12-10-2018 IPR025573 YwpF-like protein BEN31_10985 f0c0d6b23f6d8d7782cff9a528392813 929 Pfam PF13514 AAA domain 1 199 1.8E-26 T 12-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain BEN31_10985 f0c0d6b23f6d8d7782cff9a528392813 929 Gene3D G3DSA:3.40.50.300 717 924 2.5E-15 T 12-10-2018 BEN31_10985 f0c0d6b23f6d8d7782cff9a528392813 929 SUPERFAMILY SSF52540 1 921 9.79E-14 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10985 f0c0d6b23f6d8d7782cff9a528392813 929 Gene3D G3DSA:3.40.50.300 1 257 3.2E-20 T 12-10-2018 BEN31_04785 c7afff930b106e742fa1a42e444cbbee 100 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 22 98 5.0E-15 T 12-10-2018 IPR020506 Uncharacterised protein family YqfZ BEN31_12435 ebfcb557a8834f2ee31695c6fb56081d 493 Pfam PF00474 Sodium:solute symporter family 33 431 9.4E-107 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BEN31_12435 ebfcb557a8834f2ee31695c6fb56081d 493 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 431 4.6E-99 T 12-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 BEN31_12435 ebfcb557a8834f2ee31695c6fb56081d 493 Gene3D G3DSA:1.20.1730.10 21 493 7.9E-97 T 12-10-2018 IPR038377 Sodium/glucose symporter superfamily BEN31_12435 ebfcb557a8834f2ee31695c6fb56081d 493 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 12-10-2018 IPR018212 Sodium/solute symporter, conserved site BEN31_12435 ebfcb557a8834f2ee31695c6fb56081d 493 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 487 1.1E-228 T 12-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 BEN31_09215 19ed33069c692cbe0dc64990f42cbded 297 Gene3D G3DSA:2.130.10.10 2 152 2.3E-6 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_09215 19ed33069c692cbe0dc64990f42cbded 297 SUPERFAMILY SSF110296 7 191 3.14E-18 T 12-10-2018 BEN31_12355 27386e100c0ad16dce24205c4b22fc5a 145 SUPERFAMILY SSF46785 2 135 5.17E-31 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_12355 27386e100c0ad16dce24205c4b22fc5a 145 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 12-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site BEN31_12355 27386e100c0ad16dce24205c4b22fc5a 145 Gene3D G3DSA:1.10.10.10 1 141 9.3E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_12355 27386e100c0ad16dce24205c4b22fc5a 145 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.1E-36 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_12355 27386e100c0ad16dce24205c4b22fc5a 145 Pfam PF02082 Transcriptional regulator 1 83 6.2E-26 T 12-10-2018 IPR000944 Transcription regulator Rrf2-type BEN31_02245 667514d68a187f459711177a0c442acb 489 SUPERFAMILY SSF53720 4 480 4.06E-175 T 12-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 BEN31_02245 667514d68a187f459711177a0c442acb 489 Gene3D G3DSA:3.40.309.10 253 446 3.8E-196 T 12-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 BEN31_02245 667514d68a187f459711177a0c442acb 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 12-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 BEN31_02245 667514d68a187f459711177a0c442acb 489 Gene3D G3DSA:3.40.605.10 10 471 3.8E-196 T 12-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 BEN31_02245 667514d68a187f459711177a0c442acb 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 12-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 BEN31_02245 667514d68a187f459711177a0c442acb 489 Pfam PF00171 Aldehyde dehydrogenase family 11 476 1.0E-182 T 12-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 BEN31_02245 667514d68a187f459711177a0c442acb 489 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 6 474 4.1E-232 T 12-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 Pfam PF00106 short chain dehydrogenase 8 190 4.7E-32 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 Gene3D G3DSA:3.40.50.720 2 230 3.1E-43 T 12-10-2018 BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.7E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.7E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.7E-5 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-15 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_09835 440be892f33ed624aabf3c09295c60e5 231 SUPERFAMILY SSF51735 4 230 4.45E-42 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_18235 6265da53ca32d76ad2999edf1454916d 363 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 93 246 4.3E-57 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_18235 6265da53ca32d76ad2999edf1454916d 363 Gene3D G3DSA:1.10.260.150 71 339 6.5E-101 T 12-10-2018 BEN31_18235 6265da53ca32d76ad2999edf1454916d 363 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 94 246 3.8E-51 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_10130 fc17f858673ebe4f00ac7112dc3b13f3 45 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 19 43 2.3E-13 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BEN31_10130 fc17f858673ebe4f00ac7112dc3b13f3 45 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 21 44 2.8E-11 T 12-10-2018 IPR010070 Sporulation protein YjcZ-like BEN31_18150 030ff87c9532e7d67d470dae203c00a7 105 SUPERFAMILY SSF46689 1 98 9.32E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_08180 ec11dc2d0f8ee3ee45c5883bb8188ac0 147 Pfam PF02050 Flagellar FliJ protein 21 142 1.5E-19 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BEN31_08180 ec11dc2d0f8ee3ee45c5883bb8188ac0 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 3.4E-33 T 12-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 10 447 8.9E-172 T 12-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 SUPERFAMILY SSF53383 20 443 4.08E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 Gene3D G3DSA:3.40.640.10 66 334 8.6E-137 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 Gene3D G3DSA:3.90.1150.10 11 441 8.6E-137 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 Pfam PF00202 Aminotransferase class-III 30 443 8.2E-95 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 PIRSF PIRSF000521 3 139 4.9E-5 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10565 fdab5ce9dab81d8a30f87169a8226ab7 448 PIRSF PIRSF000521 125 446 2.5E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_16800 f046bc47db1c3f1b54f09e55fec18d1a 337 SUPERFAMILY SSF81345 10 333 3.92E-85 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_16800 f046bc47db1c3f1b54f09e55fec18d1a 337 Pfam PF01032 FecCD transport family 27 333 1.4E-97 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_16800 f046bc47db1c3f1b54f09e55fec18d1a 337 Gene3D G3DSA:1.10.3470.10 13 336 1.7E-100 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_03025 d9a0adb84c014620596dfe61cb8145b0 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 510 1.1E-24 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_03025 d9a0adb84c014620596dfe61cb8145b0 526 Gene3D G3DSA:3.30.300.310 419 524 8.9E-30 T 12-10-2018 BEN31_03025 d9a0adb84c014620596dfe61cb8145b0 526 SUPERFAMILY SSF56801 22 522 9.68E-139 T 12-10-2018 BEN31_03025 d9a0adb84c014620596dfe61cb8145b0 526 Pfam PF00501 AMP-binding enzyme 24 423 2.0E-79 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_03025 d9a0adb84c014620596dfe61cb8145b0 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_03025 d9a0adb84c014620596dfe61cb8145b0 526 Gene3D G3DSA:3.40.50.12780 2 416 1.8E-106 T 12-10-2018 BEN31_02020 ed0b143f45b2c20f79bcaa8b93ad5be5 174 SUPERFAMILY SSF52317 6 171 2.38E-45 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_02020 ed0b143f45b2c20f79bcaa8b93ad5be5 174 Pfam PF01965 DJ-1/PfpI family 6 167 1.9E-45 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BEN31_02020 ed0b143f45b2c20f79bcaa8b93ad5be5 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 7 171 9.3E-51 T 12-10-2018 IPR006286 Deglycase PfpI BEN31_02020 ed0b143f45b2c20f79bcaa8b93ad5be5 174 Gene3D G3DSA:3.40.50.880 2 174 7.3E-48 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_13495 f8458c978340d259448a1bc1a641ab39 148 SUPERFAMILY SSF82185 40 127 2.75E-8 T 12-10-2018 BEN31_13495 f8458c978340d259448a1bc1a641ab39 148 Gene3D G3DSA:3.90.930.1 32 144 4.1E-10 T 12-10-2018 BEN31_17015 bbd3819745f10116a70fd65df6f97753 127 Pfam PF04138 GtrA-like protein 2 119 8.2E-28 T 12-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 BEN31_01530 9bdec7680c3c1c2f4d13723fec1b3ac3 336 SUPERFAMILY SSF56112 35 314 3.98E-14 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_01530 9bdec7680c3c1c2f4d13723fec1b3ac3 336 Gene3D G3DSA:3.90.1200.10 96 311 7.5E-25 T 12-10-2018 BEN31_01530 9bdec7680c3c1c2f4d13723fec1b3ac3 336 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 2 312 1.1E-111 T 12-10-2018 IPR014254 Spore coat protein YutH BEN31_17505 f021c9adf9610313ab2f992c132fbf3f 321 PIRSF PIRSF004532 1 320 1.3E-148 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BEN31_17505 f021c9adf9610313ab2f992c132fbf3f 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 320 6.7E-160 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BEN31_17505 f021c9adf9610313ab2f992c132fbf3f 321 Gene3D G3DSA:3.40.190.90 122 283 4.0E-132 T 12-10-2018 BEN31_17505 f021c9adf9610313ab2f992c132fbf3f 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 309 2.6E-141 T 12-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 BEN31_17505 f021c9adf9610313ab2f992c132fbf3f 321 SUPERFAMILY SSF56655 1 312 1.65E-110 T 12-10-2018 BEN31_17505 f021c9adf9610313ab2f992c132fbf3f 321 Gene3D G3DSA:3.30.540.10 7 309 4.0E-132 T 12-10-2018 BEN31_12930 a4716d636cd29326e5839cce57133a98 142 SUPERFAMILY SSF55729 1 140 2.1E-35 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_12930 a4716d636cd29326e5839cce57133a98 142 Gene3D G3DSA:3.40.630.30 1 142 1.6E-44 T 12-10-2018 BEN31_12930 a4716d636cd29326e5839cce57133a98 142 Pfam PF00583 Acetyltransferase (GNAT) family 7 116 3.4E-23 T 12-10-2018 IPR000182 GNAT domain BEN31_12930 a4716d636cd29326e5839cce57133a98 142 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 6 136 3.8E-43 T 12-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 BEN31_04170 440c3d50e414696c3a96887604af89df 231 SUPERFAMILY SSF53167 2 228 8.64E-73 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BEN31_04170 440c3d50e414696c3a96887604af89df 231 Gene3D G3DSA:3.40.50.1580 1 231 2.4E-71 T 12-10-2018 BEN31_04170 440c3d50e414696c3a96887604af89df 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.2E-51 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BEN31_04170 440c3d50e414696c3a96887604af89df 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 3.5E-120 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_04170 440c3d50e414696c3a96887604af89df 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.258 T 12-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 266 2.2E-90 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 Gene3D G3DSA:2.60.410.10 286 376 2.4E-19 T 12-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 SUPERFAMILY SSF56601 2 286 6.33E-83 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 69 80 1.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 1.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 1.3E-17 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 Gene3D G3DSA:3.40.710.10 17 285 2.8E-91 T 12-10-2018 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 SMART SM00936 286 377 1.3E-25 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 377 8.9E-19 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_05550 ba7b5feac50f0ad270ca6128a4603fff 395 SUPERFAMILY SSF69189 286 379 5.3E-19 T 12-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_02475 612dfdc990c78c604715758b452f0278 443 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 431 1.1E-118 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BEN31_02475 612dfdc990c78c604715758b452f0278 443 PIRSF PIRSF006446 1 443 6.5E-109 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BEN31_01145 389b5381f90d73a26bc4dcf2c3281b1a 271 Gene3D G3DSA:3.40.50.300 3 256 1.5E-68 T 12-10-2018 BEN31_01145 389b5381f90d73a26bc4dcf2c3281b1a 271 SMART SM00382 28 217 5.5E-16 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_01145 389b5381f90d73a26bc4dcf2c3281b1a 271 Pfam PF00005 ABC transporter 20 167 1.2E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_01145 389b5381f90d73a26bc4dcf2c3281b1a 271 SUPERFAMILY SSF52540 4 230 7.56E-62 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01145 389b5381f90d73a26bc4dcf2c3281b1a 271 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_15400 71d61f16bb90ec92b7a6571034e9df1e 212 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 11 87 3.7E-21 T 12-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like BEN31_15400 71d61f16bb90ec92b7a6571034e9df1e 212 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 129 9.8E-42 T 12-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ BEN31_09740 bf9b31de9afc1fc3287b98e17c3cc1f8 108 Gene3D G3DSA:1.10.10.10 1 108 2.4E-36 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09740 bf9b31de9afc1fc3287b98e17c3cc1f8 108 Pfam PF03551 Transcriptional regulator PadR-like family 16 88 1.7E-24 T 12-10-2018 IPR005149 Transcription regulator PadR, N-terminal BEN31_09740 bf9b31de9afc1fc3287b98e17c3cc1f8 108 SUPERFAMILY SSF46785 12 105 1.2E-25 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_15440 831811bb8792f916c79c666b433c21c9 188 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BEN31_15440 831811bb8792f916c79c666b433c21c9 188 SUPERFAMILY SSF53178 2 185 1.7E-69 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BEN31_15440 831811bb8792f916c79c666b433c21c9 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 12-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 BEN31_15440 831811bb8792f916c79c666b433c21c9 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 37.286 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BEN31_15440 831811bb8792f916c79c666b433c21c9 188 Gene3D G3DSA:3.40.50.1470 1 188 5.7E-72 T 12-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 BEN31_15440 831811bb8792f916c79c666b433c21c9 188 Pfam PF01195 Peptidyl-tRNA hydrolase 5 185 2.6E-59 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BEN31_15440 831811bb8792f916c79c666b433c21c9 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 4 185 6.4E-72 T 12-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 BEN31_12915 51b694eec4e595fd5d1606453c58be34 163 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 35.558 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_12915 51b694eec4e595fd5d1606453c58be34 163 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 2.3E-65 T 12-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_12915 51b694eec4e595fd5d1606453c58be34 163 Pfam PF01967 MoaC family 15 152 1.1E-52 T 12-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_12915 51b694eec4e595fd5d1606453c58be34 163 SUPERFAMILY SSF55040 11 157 3.79E-56 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_12915 51b694eec4e595fd5d1606453c58be34 163 Gene3D G3DSA:3.30.70.640 1 162 1.0E-67 T 12-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 Gene3D G3DSA:3.30.70.150 11 125 2.6E-28 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 SUPERFAMILY SSF54966 12 124 2.49E-27 T 12-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 Gene3D G3DSA:3.20.20.110 127 415 3.2E-103 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 SUPERFAMILY SSF51649 127 414 1.44E-85 T 12-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 12 412 9.5E-214 T 12-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 12 106 6.2E-8 T 12-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 332 411 5.7E-18 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 132 301 7.5E-24 T 12-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 174 182 - T 12-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 BEN31_09495 6c8f27fbcd615dd6a5d65defb8c08bac 416 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 12 412 59.382 T 12-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 BEN31_00770 1fd4666734de897bff1e67b4d2b5b041 69 Pfam PF17356 Phage-like element PBSX protein XtrA 3 66 1.2E-17 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BEN31_00770 1fd4666734de897bff1e67b4d2b5b041 69 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 15 62 3.0E-11 T 12-10-2018 IPR035530 Phage-like element PBSX protein XtrA BEN31_02640 5c260a3d4ac9dcf0e87a6f2e3e298623 130 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.7E-17 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_02640 5c260a3d4ac9dcf0e87a6f2e3e298623 130 SUPERFAMILY SSF46785 5 79 9.11E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_02640 5c260a3d4ac9dcf0e87a6f2e3e298623 130 Gene3D G3DSA:1.10.10.10 9 125 7.2E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_02640 5c260a3d4ac9dcf0e87a6f2e3e298623 130 SMART SM00345 16 75 6.8E-16 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 291 38.097 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 Gene3D G3DSA:3.40.50.1370 6 285 1.1E-105 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 Gene3D G3DSA:3.40.50.1370 127 268 1.1E-105 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 285 2.4E-23 T 12-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 SUPERFAMILY SSF53671 1 290 1.44E-89 T 12-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 140 5.6E-40 T 12-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 3 287 3.1E-98 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 1.7E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 277 1.7E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 242 251 1.7E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 1.7E-24 T 12-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 284 6.1E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 6.1E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 6.1E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 251 6.1E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 6.1E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08555 2f2947030db5f2b1cfc5f0f788608160 307 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 6.1E-34 T 12-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_01295 a9a3e805b1e60fbfaa1533da46aac95c 83 Pfam PF10835 Protein of unknown function (DUF2573) 4 80 1.5E-39 T 12-10-2018 IPR020393 Uncharacterised protein family YusU BEN31_01295 a9a3e805b1e60fbfaa1533da46aac95c 83 ProDom PD065427 YUSU IG COIL COILED BH3491 16 78 8.0E-23 T 12-10-2018 IPR020393 Uncharacterised protein family YusU BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 Gene3D G3DSA:3.10.580.10 283 396 1.1E-14 T 12-10-2018 BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 SUPERFAMILY SSF52540 45 275 3.3E-77 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 SMART SM00116 287 335 0.04 T 12-10-2018 IPR000644 CBS domain BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 SMART SM00116 347 395 8.7E-4 T 12-10-2018 IPR000644 CBS domain BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 Pfam PF00005 ABC transporter 50 197 1.1E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 SMART SM00382 58 247 1.5E-21 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 397 1.4E-171 T 12-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 SUPERFAMILY SSF54631 279 397 4.04E-15 T 12-10-2018 BEN31_14150 a9920fb12c881bc0d29999ab652c1a03 422 Gene3D G3DSA:3.40.50.300 4 274 5.0E-73 T 12-10-2018 BEN31_04535 9962e34e14823cb635eb3c576a34ac9f 402 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 183 386 1.1E-71 T 12-10-2018 IPR010897 Sporulation stage II, protein P BEN31_04535 9962e34e14823cb635eb3c576a34ac9f 402 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 104 382 1.1E-74 T 12-10-2018 IPR010897 Sporulation stage II, protein P BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 Gene3D G3DSA:1.10.1370.30 1 500 2.9E-216 T 12-10-2018 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 1 495 2.9E-253 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PIRSF PIRSF006615 3 501 5.3E-199 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 333 352 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 265 284 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 292 308 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 245 264 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 228 244 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 402 423 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 379 396 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 447 465 1.9E-79 T 12-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 BEN31_06205 6c3e3ade51c5375dcf9bab9b4bde20fb 501 SUPERFAMILY SSF55486 8 495 1.05E-117 T 12-10-2018 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 SUPERFAMILY SSF56024 293 493 3.14E-49 T 12-10-2018 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 35 506 9.9E-184 T 12-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 Gene3D G3DSA:3.30.870.10 337 480 9.8E-28 T 12-10-2018 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 SUPERFAMILY SSF56024 129 336 1.62E-52 T 12-10-2018 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 Pfam PF13396 Phospholipase_D-nuclease N-terminal 42 84 1.7E-8 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 Gene3D G3DSA:3.30.870.10 137 328 1.1E-48 T 12-10-2018 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 SMART SM00155 419 446 5.3E-8 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 SMART SM00155 241 268 1.2E-5 T 12-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 Pfam PF13091 PLD-like domain 158 301 3.2E-14 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 Pfam PF13091 PLD-like domain 349 470 2.8E-28 T 12-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 BEN31_10275 be9724f46ae27c1484d2dc94a54e2e36 506 Hamap MF_01916 Cardiolipin synthase. 36 506 44.013 T 12-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 BEN31_13955 56d2000e55820e95dbed5e3b2c8f9fbe 128 Gene3D G3DSA:2.60.34.30 2 128 4.2E-40 T 12-10-2018 IPR038691 DNA-entry nuclease inhibitor, ComJ superfamily BEN31_13955 56d2000e55820e95dbed5e3b2c8f9fbe 128 Pfam PF11033 Competence protein J (ComJ) 9 126 4.1E-49 T 12-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ BEN31_13955 56d2000e55820e95dbed5e3b2c8f9fbe 128 ProDom PD081734 COMPETENCE J NIN DNA-ENTRY MEMBRANE INHIBITOR NUCLEASE 10 121 1.0E-24 T 12-10-2018 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ BEN31_01845 7495e44e811e4bd1de19917f8837b752 360 Gene3D G3DSA:3.40.50.2300 147 346 8.7E-110 T 12-10-2018 BEN31_01845 7495e44e811e4bd1de19917f8837b752 360 SUPERFAMILY SSF53822 54 267 2.3E-11 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_01845 7495e44e811e4bd1de19917f8837b752 360 Gene3D G3DSA:3.40.50.2300 43 313 8.7E-110 T 12-10-2018 BEN31_01845 7495e44e811e4bd1de19917f8837b752 360 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 41 351 4.4E-96 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 SUPERFAMILY SSF53187 4 369 1.02E-66 T 12-10-2018 BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 SUPERFAMILY SSF55031 179 284 1.14E-28 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 4 373 61.698 T 12-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 PIRSF PIRSF005962 2 376 9.3E-105 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 Gene3D G3DSA:3.30.70.360 174 288 6.0E-117 T 12-10-2018 BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 Pfam PF01546 Peptidase family M20/M25/M40 67 371 5.7E-23 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 Pfam PF07687 Peptidase dimerisation domain 180 270 1.7E-10 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 Gene3D G3DSA:3.40.630.10 7 359 6.0E-117 T 12-10-2018 BEN31_09200 df85f2d7886b74d1d99f4f8633b6acd4 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 362 2.6E-87 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_07265 56305c33b3f58b6f2adc91b22cf446e2 193 Gene3D G3DSA:3.40.630.30 1 193 2.2E-47 T 12-10-2018 BEN31_07265 56305c33b3f58b6f2adc91b22cf446e2 193 SUPERFAMILY SSF55729 4 177 4.49E-42 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_07265 56305c33b3f58b6f2adc91b22cf446e2 193 Pfam PF13302 Acetyltransferase (GNAT) domain 12 151 1.4E-18 T 12-10-2018 IPR000182 GNAT domain BEN31_03590 d0b61963ea368cd1018b05ccb622791b 195 Pfam PF14025 Protein of unknown function (DUF4241) 33 195 4.2E-42 T 12-10-2018 IPR025335 Protein of unknown function DUF4241 BEN31_08075 ffb84415f42956c1069bd9c89b22521d 208 Gene3D G3DSA:3.40.1550.10 5 207 4.7E-58 T 12-10-2018 IPR028976 CheC-like superfamily BEN31_08075 ffb84415f42956c1069bd9c89b22521d 208 Pfam PF04509 CheC-like family 111 146 1.4E-11 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BEN31_08075 ffb84415f42956c1069bd9c89b22521d 208 Pfam PF04509 CheC-like family 10 46 3.4E-13 T 12-10-2018 IPR007597 CheC-like protein GO:0016787 BEN31_08075 ffb84415f42956c1069bd9c89b22521d 208 SUPERFAMILY SSF103039 5 206 2.49E-50 T 12-10-2018 IPR028976 CheC-like superfamily BEN31_14275 58d77d209ca9b11b4193b4b464ea10d8 313 Pfam PF08664 YcbB domain 162 300 4.0E-49 T 12-10-2018 IPR013972 YcbB domain BEN31_14275 58d77d209ca9b11b4193b4b464ea10d8 313 SMART SM00448 1 114 4.6E-19 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_14275 58d77d209ca9b11b4193b4b464ea10d8 313 SUPERFAMILY SSF52172 2 144 8.54E-23 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_14275 58d77d209ca9b11b4193b4b464ea10d8 313 Pfam PF00072 Response regulator receiver domain 4 114 6.5E-21 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_14275 58d77d209ca9b11b4193b4b464ea10d8 313 Gene3D G3DSA:3.40.50.2300 1 129 1.7E-21 T 12-10-2018 BEN31_15555 945ed22d61e6d9e1c5313e014e4465ce 146 Gene3D G3DSA:1.20.120.490 25 146 7.5E-36 T 12-10-2018 IPR024042 TM1646-like domain superfamily BEN31_15555 945ed22d61e6d9e1c5313e014e4465ce 146 SUPERFAMILY SSF158397 27 146 4.97E-33 T 12-10-2018 IPR024042 TM1646-like domain superfamily BEN31_15555 945ed22d61e6d9e1c5313e014e4465ce 146 Pfam PF03885 Protein of unknown function (DUF327) 22 145 1.1E-36 T 12-10-2018 IPR005585 Protein of unknown function DUF327 BEN31_02885 697da2522f4f4814de2cdf3ccc607983 201 Gene3D G3DSA:2.40.50.140 5 199 6.2E-73 T 12-10-2018 BEN31_02885 697da2522f4f4814de2cdf3ccc607983 201 Gene3D G3DSA:3.30.1940.10 18 92 6.2E-73 T 12-10-2018 IPR037154 YtpR-like superfamily BEN31_02885 697da2522f4f4814de2cdf3ccc607983 201 SUPERFAMILY SSF50249 92 199 7.1E-33 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_02885 697da2522f4f4814de2cdf3ccc607983 201 Pfam PF01588 Putative tRNA binding domain 96 197 1.0E-26 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BEN31_02885 697da2522f4f4814de2cdf3ccc607983 201 Pfam PF14794 Domain of unknown function (DUF4479) 23 91 3.2E-25 T 12-10-2018 IPR027855 Domain of unknown function DUF4479 BEN31_14360 9a8a51eb759e7abc92b4cfdf6242a2e6 182 PIRSF PIRSF037663 6 172 1.8E-13 T 12-10-2018 IPR017255 Acetyltransferase, GNAT, predicted BEN31_14360 9a8a51eb759e7abc92b4cfdf6242a2e6 182 SUPERFAMILY SSF55729 5 149 1.05E-26 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_14360 9a8a51eb759e7abc92b4cfdf6242a2e6 182 Gene3D G3DSA:3.40.630.30 3 151 1.7E-28 T 12-10-2018 BEN31_14360 9a8a51eb759e7abc92b4cfdf6242a2e6 182 Pfam PF00583 Acetyltransferase (GNAT) family 45 147 4.1E-17 T 12-10-2018 IPR000182 GNAT domain BEN31_07960 fe4fa259e454850f09b8bd4666e93003 92 SUPERFAMILY SSF103007 1 92 2.09E-30 T 12-10-2018 IPR036746 TT1725-like superfamily BEN31_07960 fe4fa259e454850f09b8bd4666e93003 92 Pfam PF04456 Protein of unknown function (DUF503) 2 86 8.8E-31 T 12-10-2018 IPR007546 Protein of unknown function DUF503 BEN31_07960 fe4fa259e454850f09b8bd4666e93003 92 Gene3D G3DSA:3.30.70.1120 1 92 1.2E-24 T 12-10-2018 IPR036746 TT1725-like superfamily BEN31_01050 b1cccf5477a283dd7569da8d540cb7b3 247 SUPERFAMILY SSF52540 4 225 5.11E-56 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_01050 b1cccf5477a283dd7569da8d540cb7b3 247 Gene3D G3DSA:3.40.50.300 1 241 7.4E-64 T 12-10-2018 BEN31_01050 b1cccf5477a283dd7569da8d540cb7b3 247 SMART SM00382 29 234 2.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_01050 b1cccf5477a283dd7569da8d540cb7b3 247 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_01050 b1cccf5477a283dd7569da8d540cb7b3 247 Pfam PF00005 ABC transporter 20 165 3.6E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_14610 ec548a7f9dcdd32ce831c935f00bdd79 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 4.1E-18 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14610 ec548a7f9dcdd32ce831c935f00bdd79 220 Gene3D G3DSA:1.10.357.10 2 201 3.1E-45 T 12-10-2018 BEN31_14610 ec548a7f9dcdd32ce831c935f00bdd79 220 SUPERFAMILY SSF46689 5 77 6.16E-20 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_14610 ec548a7f9dcdd32ce831c935f00bdd79 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14610 ec548a7f9dcdd32ce831c935f00bdd79 220 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.1E-10 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_04975 158ee9162cf18b334b178c79a224e107 103 Gene3D G3DSA:3.10.450.390 21 103 2.6E-27 T 12-10-2018 BEN31_04975 158ee9162cf18b334b178c79a224e107 103 Pfam PF13028 Protein of unknown function (DUF3889) 9 100 4.2E-32 T 12-10-2018 IPR024987 Protein of unknown function DUF3889 BEN31_15660 7f5b51d982748224a8e5acc539065f4a 207 SUPERFAMILY SSF52540 1 205 3.36E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_15660 7f5b51d982748224a8e5acc539065f4a 207 Gene3D G3DSA:3.40.50.300 5 207 2.2E-50 T 12-10-2018 BEN31_15660 7f5b51d982748224a8e5acc539065f4a 207 Pfam PF01712 Deoxynucleoside kinase 7 206 1.5E-55 T 12-10-2018 IPR031314 Deoxynucleoside kinase domain BEN31_15660 7f5b51d982748224a8e5acc539065f4a 207 PIRSF PIRSF000705 3 207 4.1E-60 T 12-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 217 5.9E-27 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 SUPERFAMILY SSF56784 7 249 1.22E-65 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_13655 5504a6e57ec6638140b932c840a38582 251 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 12-10-2018 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 Gene3D G3DSA:3.40.50.1000 11 244 1.1E-59 T 12-10-2018 IPR023214 HAD superfamily BEN31_13655 5504a6e57ec6638140b932c840a38582 251 Pfam PF08282 haloacid dehalogenase-like hydrolase 127 244 6.0E-31 T 12-10-2018 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 198 217 1.2E-5 T 12-10-2018 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 221 233 1.2E-5 T 12-10-2018 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 14 28 1.2E-5 T 12-10-2018 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 Gene3D G3DSA:3.30.1240.10 89 174 1.1E-59 T 12-10-2018 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 244 1.1E-47 T 12-10-2018 IPR000150 Cof family GO:0016787 BEN31_13655 5504a6e57ec6638140b932c840a38582 251 ProSitePatterns PS01229 Hypothetical cof family signature 2. 198 220 - T 12-10-2018 BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 SUPERFAMILY SSF46785 2 106 5.23E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 Gene3D G3DSA:1.10.10.10 1 90 1.0E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 Gene3D G3DSA:3.40.190.290 91 285 5.2E-31 T 12-10-2018 BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-19 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 Pfam PF03466 LysR substrate binding domain 86 282 4.3E-37 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_09610 5e16fac3c197c40b954621a46adb7746 287 SUPERFAMILY SSF53850 88 282 6.27E-34 T 12-10-2018 BEN31_07290 f2f9f3e3ef8abd376c32116b798aa238 285 Gene3D G3DSA:3.40.800.10 31 276 8.4E-29 T 12-10-2018 BEN31_07290 f2f9f3e3ef8abd376c32116b798aa238 285 Pfam PF00491 Arginase family 61 218 2.3E-17 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_07290 f2f9f3e3ef8abd376c32116b798aa238 285 SUPERFAMILY SSF52768 5 270 9.18E-41 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BEN31_02560 ec8d7760f30f2504c0fa769ddebca061 256 Pfam PF00005 ABC transporter 24 162 1.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_02560 ec8d7760f30f2504c0fa769ddebca061 256 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_02560 ec8d7760f30f2504c0fa769ddebca061 256 SUPERFAMILY SSF52540 4 225 3.77E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_02560 ec8d7760f30f2504c0fa769ddebca061 256 Gene3D G3DSA:3.40.50.300 3 252 2.3E-59 T 12-10-2018 BEN31_02560 ec8d7760f30f2504c0fa769ddebca061 256 SMART SM00382 32 213 6.6E-17 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_05785 1a939775d1c007d949ab8f8f8543c94d 193 Pfam PF05389 Negative regulator of genetic competence (MecA) 96 189 6.2E-16 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BEN31_05785 1a939775d1c007d949ab8f8f8543c94d 193 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 90 1.4E-25 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BEN31_05785 1a939775d1c007d949ab8f8f8543c94d 193 PIRSF PIRSF029008 1 193 6.1E-62 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BEN31_05785 1a939775d1c007d949ab8f8f8543c94d 193 Gene3D G3DSA:3.30.70.1950 104 193 9.8E-31 T 12-10-2018 IPR038471 MecA, C-terminal domain superfamily BEN31_05785 1a939775d1c007d949ab8f8f8543c94d 193 Hamap MF_01124 Adapter protein MecA [mecA]. 1 193 24.355 T 12-10-2018 IPR008681 Negative regulator of genetic competence, MecA BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 Hamap MF_00798 Transcription attenuation protein MtrB [mtrB]. 1 73 31.241 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 SUPERFAMILY SSF51219 7 74 4.45E-36 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 Gene3D G3DSA:2.60.40.50 1 76 4.1E-42 T 12-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 26 42 6.9E-41 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 9 26 6.9E-41 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 42 58 6.9E-41 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 58 74 6.9E-41 T 12-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 BEN31_05895 3a86a141ead96828db76effb2f81ebb7 76 Pfam PF02081 Tryptophan RNA-binding attenuator protein 6 73 9.6E-40 T 12-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain BEN31_18195 95a85e6b2f79f761e928387be58dd53c 394 Pfam PF13579 Glycosyl transferase 4-like domain 26 178 5.0E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN31_18195 95a85e6b2f79f761e928387be58dd53c 394 Pfam PF00534 Glycosyl transferases group 1 206 352 2.2E-27 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BEN31_18195 95a85e6b2f79f761e928387be58dd53c 394 Gene3D G3DSA:3.40.50.2000 210 365 1.9E-32 T 12-10-2018 BEN31_18195 95a85e6b2f79f761e928387be58dd53c 394 SUPERFAMILY SSF53756 1 387 1.97E-65 T 12-10-2018 BEN31_18195 95a85e6b2f79f761e928387be58dd53c 394 Gene3D G3DSA:3.40.50.2000 1 209 3.9E-23 T 12-10-2018 BEN31_08985 ca3ee9fce43f89c90366c30b0863920b 496 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 381 463 3.9E-12 T 12-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 BEN31_08985 ca3ee9fce43f89c90366c30b0863920b 496 SUPERFAMILY SSF55904 347 492 4.45E-39 T 12-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 BEN31_08985 ca3ee9fce43f89c90366c30b0863920b 496 SUPERFAMILY SSF53383 12 388 4.35E-97 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_08985 ca3ee9fce43f89c90366c30b0863920b 496 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 12 375 1.1E-116 T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BEN31_08985 ca3ee9fce43f89c90366c30b0863920b 496 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 227 241 - T 12-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 BEN31_08985 ca3ee9fce43f89c90366c30b0863920b 496 Gene3D G3DSA:3.90.100.10 393 493 1.5E-18 T 12-10-2018 BEN31_08985 ca3ee9fce43f89c90366c30b0863920b 496 Gene3D G3DSA:3.40.640.10 12 288 1.9E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10340 f03bd003b26a11e6224be2796f1d3c82 304 Gene3D G3DSA:1.10.3720.10 89 300 9.3E-19 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_10340 f03bd003b26a11e6224be2796f1d3c82 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 77 7.0E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BEN31_10340 f03bd003b26a11e6224be2796f1d3c82 304 SUPERFAMILY SSF161098 95 288 4.06E-25 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_10340 f03bd003b26a11e6224be2796f1d3c82 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 302 5.5E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 Pfam PF01268 Formate--tetrahydrofolate ligase 7 560 6.0E-266 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 Gene3D G3DSA:3.30.1510.10 133 251 5.0E-201 T 12-10-2018 BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 5 560 48.293 T 12-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 Gene3D G3DSA:3.10.410.10 447 536 6.8E-36 T 12-10-2018 BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 SUPERFAMILY SSF52540 8 558 3.23E-241 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 Gene3D G3DSA:3.40.50.300 10 442 5.0E-201 T 12-10-2018 BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 107 117 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BEN31_06295 f9c267cb5c1d87838c6df4196a0b6447 560 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 332 343 - T 12-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 BEN31_14080 be7771cd555691e6b617e680588541b5 209 Pfam PF01810 LysE type translocator 12 203 4.4E-46 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BEN31_13590 367951492a35b5da3a80e51d6f44ead6 140 SUPERFAMILY SSF50475 4 132 2.06E-34 T 12-10-2018 BEN31_13590 367951492a35b5da3a80e51d6f44ead6 140 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 7 129 3.1E-21 T 12-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain BEN31_13590 367951492a35b5da3a80e51d6f44ead6 140 Gene3D G3DSA:2.30.110.10 3 137 1.6E-44 T 12-10-2018 IPR012349 FMN-binding split barrel GO:0048037 BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 Pfam PF01368 DHH family 339 496 8.7E-22 T 12-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 SMART SM00267 132 299 4.0E-11 T 12-10-2018 IPR000160 GGDEF domain BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 Pfam PF02272 DHHA1 domain 518 649 5.6E-14 T 12-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 Gene3D G3DSA:3.90.1640.10 322 541 2.2E-54 T 12-10-2018 BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 PIRSF PIRSF026583 1 659 3.3E-271 T 12-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 Gene3D G3DSA:3.10.310.30 542 655 6.2E-10 T 12-10-2018 BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 Gene3D G3DSA:3.30.450.20 53 161 4.3E-35 T 12-10-2018 BEN31_15930 600c6e25fcb0d7ddddb7ad52931a4c63 659 SUPERFAMILY SSF64182 339 644 1.83E-68 T 12-10-2018 IPR038763 DHH phosphoesterase superfamily BEN31_00115 13c4ac08af1e664d2b8ad2396da6a4eb 324 Pfam PF00268 Ribonucleotide reductase, small chain 8 283 1.6E-79 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00115 13c4ac08af1e664d2b8ad2396da6a4eb 324 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 5 321 1.3E-140 T 12-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 BEN31_00115 13c4ac08af1e664d2b8ad2396da6a4eb 324 SUPERFAMILY SSF47240 4 321 4.46E-90 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_00115 13c4ac08af1e664d2b8ad2396da6a4eb 324 PIRSF PIRSF000355 2 318 3.7E-88 T 12-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00115 13c4ac08af1e664d2b8ad2396da6a4eb 324 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 95 112 - T 12-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 BEN31_00115 13c4ac08af1e664d2b8ad2396da6a4eb 324 Gene3D G3DSA:1.10.620.20 2 292 5.7E-106 T 12-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 BEN31_16615 093f51ebe6bd7aa2b2b2a80a99666ac9 225 Pfam PF11738 Protein of unknown function (DUF3298) 154 221 8.8E-11 T 12-10-2018 IPR021729 Domain of unknown function DUF3298 BEN31_16615 093f51ebe6bd7aa2b2b2a80a99666ac9 225 Gene3D G3DSA:3.90.640.20 145 225 9.9E-14 T 12-10-2018 IPR037126 PdaC/RsiV-like superfamily BEN31_16615 093f51ebe6bd7aa2b2b2a80a99666ac9 225 Pfam PF13739 Domain of unknown function (DUF4163) 39 127 2.7E-10 T 12-10-2018 IPR025303 Deacetylase PdaC BEN31_16615 093f51ebe6bd7aa2b2b2a80a99666ac9 225 Gene3D G3DSA:3.30.565.40 27 141 4.8E-10 T 12-10-2018 BEN31_03310 3fd4f30bfb7503189422b886c73ca7b6 473 Pfam PF07261 Replication initiation and membrane attachment 332 394 1.0E-9 T 12-10-2018 IPR006343 DnaD domain BEN31_02905 d18860f9c626495c75eb9d4e5a7430d7 156 Gene3D G3DSA:1.20.120.20 32 156 2.8E-7 T 12-10-2018 BEN31_02905 d18860f9c626495c75eb9d4e5a7430d7 156 Pfam PF12732 YtxH-like protein 12 93 1.4E-21 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH BEN31_02905 d18860f9c626495c75eb9d4e5a7430d7 156 SUPERFAMILY SSF58113 47 150 8.24E-5 T 12-10-2018 BEN31_09785 d0833a7149843d9ecc128ab4fb4913a9 320 Gene3D G3DSA:1.10.3720.10 104 320 1.5E-22 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_09785 d0833a7149843d9ecc128ab4fb4913a9 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 319 2.2E-30 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_09785 d0833a7149843d9ecc128ab4fb4913a9 320 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 40 92 2.6E-17 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BEN31_09785 d0833a7149843d9ecc128ab4fb4913a9 320 SUPERFAMILY SSF161098 110 302 9.29E-28 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_02980 4b7261d55e9d0e385de43f39deea65e8 165 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 12-10-2018 IPR000614 Free Met sulfoxide reductase conserved site BEN31_02980 4b7261d55e9d0e385de43f39deea65e8 165 Gene3D G3DSA:3.30.450.40 11 165 1.2E-64 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_02980 4b7261d55e9d0e385de43f39deea65e8 165 SUPERFAMILY SSF55781 15 159 8.51E-43 T 12-10-2018 BEN31_02980 4b7261d55e9d0e385de43f39deea65e8 165 SMART SM00065 31 165 1.1E-4 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_02980 4b7261d55e9d0e385de43f39deea65e8 165 Pfam PF13185 GAF domain 66 159 6.7E-11 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_18010 6ff952b9a46466214375dda802ee5cf3 275 PIRSF PIRSF006625 1 275 6.7E-133 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN31_18010 6ff952b9a46466214375dda802ee5cf3 275 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 275 55.302 T 12-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN31_18010 6ff952b9a46466214375dda802ee5cf3 275 SUPERFAMILY SSF51182 1 259 1.25E-102 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_18010 6ff952b9a46466214375dda802ee5cf3 275 Gene3D G3DSA:2.60.120.520 30 141 8.4E-116 T 12-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN31_18010 6ff952b9a46466214375dda802ee5cf3 275 Gene3D G3DSA:2.60.120.10 10 260 8.4E-116 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_18010 6ff952b9a46466214375dda802ee5cf3 275 Pfam PF04962 KduI/IolB family 37 267 2.0E-39 T 12-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 BEN31_05745 e8a6f90b56188c8a833501afe5eb270f 180 Pfam PF12822 ECF transporter, substrate-specific component 1 162 9.9E-21 T 12-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 BEN31_05745 e8a6f90b56188c8a833501afe5eb270f 180 PIRSF PIRSF037778 1 176 1.8E-41 T 12-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 BEN31_05745 e8a6f90b56188c8a833501afe5eb270f 180 Gene3D G3DSA:1.10.1760.20 1 179 4.1E-46 T 12-10-2018 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 1.2E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 1.2E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 1.2E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 1.2E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 1.2E-53 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 Gene3D G3DSA:3.90.226.10 1 196 1.8E-84 T 12-10-2018 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 Pfam PF00574 Clp protease 13 192 1.6E-87 T 12-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 2.8E-109 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 12-10-2018 IPR018215 ClpP, Ser active site BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 SUPERFAMILY SSF52096 10 194 7.82E-74 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.473 T 12-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 BEN31_18680 ddf94811e6c322330b1c251d1f4501d4 198 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 12-10-2018 IPR033135 ClpP, histidine active site BEN31_09755 8892e93be50df89a013b789fb479d259 322 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_09755 8892e93be50df89a013b789fb479d259 322 SUPERFAMILY SSF52540 6 251 1.82E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09755 8892e93be50df89a013b789fb479d259 322 Pfam PF00005 ABC transporter 27 179 1.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09755 8892e93be50df89a013b789fb479d259 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 318 7.8E-28 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_09755 8892e93be50df89a013b789fb479d259 322 SMART SM00382 36 229 8.4E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_09755 8892e93be50df89a013b789fb479d259 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 298 9.2E-16 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_09755 8892e93be50df89a013b789fb479d259 322 Gene3D G3DSA:3.40.50.300 4 322 1.0E-104 T 12-10-2018 BEN31_05025 6a4538bf887877a9532aac66ecfc640a 128 SUPERFAMILY SSF52821 23 121 1.83E-33 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_05025 6a4538bf887877a9532aac66ecfc640a 128 Gene3D G3DSA:3.40.250.10 33 128 2.8E-29 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_05025 6a4538bf887877a9532aac66ecfc640a 128 Pfam PF00581 Rhodanese-like domain 43 120 8.2E-19 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_05025 6a4538bf887877a9532aac66ecfc640a 128 SMART SM00450 31 126 1.9E-31 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_09350 81971a67936d6a74b6dfe724e4f4c04e 342 SUPERFAMILY SSF102114 85 305 1.57E-6 T 12-10-2018 BEN31_09350 81971a67936d6a74b6dfe724e4f4c04e 342 Gene3D G3DSA:3.40.50.12110 3 115 2.2E-46 T 12-10-2018 BEN31_09350 81971a67936d6a74b6dfe724e4f4c04e 342 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 5 342 2.3E-155 T 12-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 BEN31_09350 81971a67936d6a74b6dfe724e4f4c04e 342 Gene3D G3DSA:3.80.30.30 116 342 7.4E-91 T 12-10-2018 BEN31_00755 eb272a44869642ae8335bd2c222f3db6 282 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 182 256 7.1E-26 T 12-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal BEN31_00755 eb272a44869642ae8335bd2c222f3db6 282 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 184 255 5.1E-28 T 12-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal BEN31_14420 4e496024240d7af58de402a99c80ed8e 372 Pfam PF02378 Phosphotransferase system, EIIC 14 284 1.8E-10 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_14420 4e496024240d7af58de402a99c80ed8e 372 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 6 337 9.0E-60 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BEN31_10495 8bce1b998a147133125e7112cba720cc 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 7.1E-19 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BEN31_10495 8bce1b998a147133125e7112cba720cc 280 Gene3D G3DSA:3.30.70.120 192 268 2.1E-20 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_10495 8bce1b998a147133125e7112cba720cc 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 215 5.5E-61 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_10495 8bce1b998a147133125e7112cba720cc 280 PIRSF PIRSF006483 3 280 7.3E-99 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 SUPERFAMILY SSF52768 4 372 1.15E-105 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 15 35 1.6E-52 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 273 289 1.6E-52 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 349 368 1.6E-52 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 332 348 1.6E-52 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 106 119 1.6E-52 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 85 99 1.6E-52 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 312 331 1.6E-52 T 12-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01270 Histone deacetylase superfamily signature 162 177 2.3E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01270 Histone deacetylase superfamily signature 129 152 2.3E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 PRINTS PR01270 Histone deacetylase superfamily signature 248 258 2.3E-17 T 12-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 Gene3D G3DSA:3.40.800.20 1 371 1.9E-101 T 12-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN31_02925 f02717ac3c7dcf9de0b0389d555f536f 386 Pfam PF00850 Histone deacetylase domain 21 315 1.2E-75 T 12-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 BEN31_01130 1d2feb03357ebb587164aa2eb4c53964 312 Gene3D G3DSA:3.40.50.1980 24 153 1.9E-26 T 12-10-2018 BEN31_01130 1d2feb03357ebb587164aa2eb4c53964 312 Gene3D G3DSA:3.40.50.1980 154 312 2.4E-55 T 12-10-2018 BEN31_01130 1d2feb03357ebb587164aa2eb4c53964 312 Pfam PF01497 Periplasmic binding protein 56 286 1.6E-35 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_01130 1d2feb03357ebb587164aa2eb4c53964 312 SUPERFAMILY SSF53807 35 301 2.75E-54 T 12-10-2018 BEN31_18425 416496456713d15ab3f6b29bd70f83b5 449 PIRSF PIRSF006060 1 446 3.7E-63 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_18425 416496456713d15ab3f6b29bd70f83b5 449 Gene3D G3DSA:1.20.1740.10 7 448 1.3E-61 T 12-10-2018 BEN31_18425 416496456713d15ab3f6b29bd70f83b5 449 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_18425 416496456713d15ab3f6b29bd70f83b5 449 Pfam PF00324 Amino acid permease 16 429 1.9E-89 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_11255 0be0f57aba2ff17a716a6de7d5b5989e 530 Pfam PF13556 PucR C-terminal helix-turn-helix domain 463 520 1.8E-13 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_11255 0be0f57aba2ff17a716a6de7d5b5989e 530 Gene3D G3DSA:1.10.10.2840 394 525 6.6E-12 T 12-10-2018 BEN31_11255 0be0f57aba2ff17a716a6de7d5b5989e 530 Pfam PF07905 Purine catabolism regulatory protein-like family 11 129 1.2E-34 T 12-10-2018 IPR012914 Purine catabolism PurC-like domain BEN31_08095 f8e9dc4067e8311acb58a60861d7ce0c 301 SUPERFAMILY SSF52540 31 276 8.23E-48 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_08095 f8e9dc4067e8311acb58a60861d7ce0c 301 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 32 271 2.5E-17 T 12-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 BEN31_08095 f8e9dc4067e8311acb58a60861d7ce0c 301 PIRSF PIRSF003092 3 299 1.8E-81 T 12-10-2018 IPR025501 ATP binding protein MinD BEN31_08095 f8e9dc4067e8311acb58a60861d7ce0c 301 Gene3D G3DSA:3.40.50.300 31 271 1.9E-57 T 12-10-2018 BEN31_15520 72714cc7d59fcf5bc0003a3f27e4a7ee 94 SMART SM00966 8 51 6.6E-10 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_15520 72714cc7d59fcf5bc0003a3f27e4a7ee 94 SUPERFAMILY SSF89447 1 52 1.23E-16 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN31_15520 72714cc7d59fcf5bc0003a3f27e4a7ee 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 8.8E-12 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_15520 72714cc7d59fcf5bc0003a3f27e4a7ee 94 Gene3D G3DSA:2.10.260.10 1 51 1.4E-26 T 12-10-2018 BEN31_15520 72714cc7d59fcf5bc0003a3f27e4a7ee 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 4.6E-11 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_05260 425fb1fffcede44508179be618a38f6f 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 142 4.2E-62 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BEN31_05260 425fb1fffcede44508179be618a38f6f 145 Gene3D G3DSA:3.40.30.10 25 142 1.5E-52 T 12-10-2018 BEN31_05260 425fb1fffcede44508179be618a38f6f 145 Pfam PF06491 Disulphide isomerase 8 142 3.7E-61 T 12-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family BEN31_18050 3ee41dc466be7a26f7047af267c796f2 421 SUPERFAMILY SSF53850 18 411 8.28E-75 T 12-10-2018 BEN31_18050 3ee41dc466be7a26f7047af267c796f2 421 Gene3D G3DSA:3.40.190.10 156 405 2.2E-152 T 12-10-2018 BEN31_18050 3ee41dc466be7a26f7047af267c796f2 421 Gene3D G3DSA:3.40.190.10 39 382 2.2E-152 T 12-10-2018 BEN31_18050 3ee41dc466be7a26f7047af267c796f2 421 Pfam PF01547 Bacterial extracellular solute-binding protein 48 341 2.9E-37 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 Gene3D G3DSA:3.40.47.10 255 398 9.6E-49 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 PIRSF PIRSF000447 1 410 4.7E-166 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 SMART SM00825 Beta-ketoacyl synthase 4 410 2.2E-15 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 407 2.3E-172 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 SUPERFAMILY SSF53901 1 248 5.16E-73 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 367 2.1E-33 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 Gene3D G3DSA:3.40.47.10 1 253 1.3E-89 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 1.2E-60 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN31_04390 f7af2ab9d3c06f381b061fad0f01d3d2 410 SUPERFAMILY SSF53901 213 409 5.77E-67 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_06495 c56afac1801865cca8bbf02042f34f5c 231 Pfam PF01048 Phosphorylase superfamily 16 217 5.8E-39 T 12-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 BEN31_06495 c56afac1801865cca8bbf02042f34f5c 231 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 12-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 BEN31_06495 c56afac1801865cca8bbf02042f34f5c 231 SUPERFAMILY SSF53167 2 230 5.37E-88 T 12-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 BEN31_06495 c56afac1801865cca8bbf02042f34f5c 231 Gene3D G3DSA:3.40.50.1580 1 231 1.1E-72 T 12-10-2018 BEN31_06495 c56afac1801865cca8bbf02042f34f5c 231 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 231 45.211 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BEN31_06495 c56afac1801865cca8bbf02042f34f5c 231 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 230 1.1E-111 T 12-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 BEN31_16080 f8a291066e4ad5655a5e5871c9051fbf 459 Pfam PF07435 YycH protein 4 458 6.2E-118 T 12-10-2018 IPR009996 Regulatory protein YycH BEN31_16080 f8a291066e4ad5655a5e5871c9051fbf 459 Gene3D G3DSA:3.10.450.310 211 414 1.6E-63 T 12-10-2018 BEN31_16080 f8a291066e4ad5655a5e5871c9051fbf 459 Gene3D G3DSA:3.30.310.160 233 374 1.6E-63 T 12-10-2018 BEN31_17775 ad29919b3aec100f0f04b6b44e0c1cac 295 SUPERFAMILY SSF53850 31 290 3.29E-56 T 12-10-2018 BEN31_17775 ad29919b3aec100f0f04b6b44e0c1cac 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 78 287 3.8E-59 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_17775 ad29919b3aec100f0f04b6b44e0c1cac 295 SMART SM00062 74 289 3.6E-54 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_17775 ad29919b3aec100f0f04b6b44e0c1cac 295 Gene3D G3DSA:3.40.190.10 72 286 7.6E-59 T 12-10-2018 BEN31_17775 ad29919b3aec100f0f04b6b44e0c1cac 295 Gene3D G3DSA:3.40.190.10 157 251 7.6E-59 T 12-10-2018 BEN31_09550 38675f0dc4a87f4357d910c0742def4e 242 Pfam PF08876 Domain of unknown function (DUF1836) 64 159 2.4E-20 T 12-10-2018 IPR014975 Protein of unknown function DUF1836 BEN31_10230 dec6b7bd3779461b95bb322c31af5303 266 Gene3D G3DSA:3.40.50.10330 16 262 2.0E-98 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BEN31_10230 dec6b7bd3779461b95bb322c31af5303 266 Hamap MF_00361 NAD kinase [nadK]. 1 263 23.521 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN31_10230 dec6b7bd3779461b95bb322c31af5303 266 SUPERFAMILY SSF111331 20 261 6.8E-64 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BEN31_10230 dec6b7bd3779461b95bb322c31af5303 266 Pfam PF01513 ATP-NAD kinase 23 188 2.6E-25 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN31_10230 dec6b7bd3779461b95bb322c31af5303 266 Gene3D G3DSA:2.60.200.30 102 240 2.0E-98 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 SMART SM00354 1 71 2.0E-35 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 12-10-2018 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 Gene3D G3DSA:1.10.260.40 3 58 6.6E-24 T 12-10-2018 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 SUPERFAMILY SSF53822 60 323 7.46E-67 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.3E-6 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 Gene3D G3DSA:3.40.50.2300 147 324 2.8E-45 T 12-10-2018 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 Pfam PF13377 Periplasmic binding protein-like domain 165 322 1.8E-30 T 12-10-2018 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 Gene3D G3DSA:3.40.50.2300 59 146 7.5E-23 T 12-10-2018 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.3E-21 T 12-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 BEN31_17930 c1c1056535984f85a03c223a9cc25393 328 SUPERFAMILY SSF47413 2 59 8.06E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_02255 fb91f0e8c2dc038031b2e9e75162027e 159 Gene3D G3DSA:1.20.120.450 1 158 5.0E-37 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_02255 fb91f0e8c2dc038031b2e9e75162027e 159 Pfam PF12867 DinB superfamily 4 152 2.1E-19 T 12-10-2018 IPR024775 DinB-like domain BEN31_02255 fb91f0e8c2dc038031b2e9e75162027e 159 SUPERFAMILY SSF109854 2 159 1.98E-28 T 12-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 152 2.7E-6 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 109 6.0E-4 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 Gene3D G3DSA:1.10.3130.10 2 67 1.8E-25 T 12-10-2018 BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 Gene3D G3DSA:2.160.10.10 68 186 3.7E-37 T 12-10-2018 BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 6.2E-78 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 SUPERFAMILY SSF51161 3 169 4.71E-55 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 PIRSF PIRSF000441 1 217 9.7E-85 T 12-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BEN31_15155 1efe97e309a43666188c8720dec3aa64 217 Pfam PF06426 Serine acetyltransferase, N-terminal 5 36 1.3E-4 T 12-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Gene3D G3DSA:2.30.40.20 23 76 2.3E-46 T 12-10-2018 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Pfam PF11799 impB/mucB/samB family C-terminal domain 245 355 4.1E-19 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Gene3D G3DSA:3.30.70.270 6 163 2.3E-46 T 12-10-2018 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Hamap MF_01113 DNA polymerase IV [dinB]. 3 360 32.114 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 SUPERFAMILY SSF100879 247 348 6.87E-20 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Pfam PF00817 impB/mucB/samB family 9 157 2.4E-43 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Gene3D G3DSA:1.10.150.20 173 232 2.7E-13 T 12-10-2018 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 SUPERFAMILY SSF56672 4 240 6.4E-72 T 12-10-2018 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Gene3D G3DSA:3.30.1490.100 248 357 2.5E-19 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05435 c1370e411abd930d4f1c2cf06adb8c03 410 Pfam PF11798 IMS family HHH motif 173 203 9.6E-7 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 Gene3D G3DSA:1.25.40.10 368 512 7.3E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 Pfam PF01694 Rhomboid family 224 359 7.9E-40 T 12-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 SUPERFAMILY SSF144091 180 361 9.55E-48 T 12-10-2018 BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 SUPERFAMILY SSF48452 402 511 1.19E-16 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 Pfam PF14559 Tetratricopeptide repeat 442 499 3.8E-6 T 12-10-2018 BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 Gene3D G3DSA:1.20.1540.10 176 367 7.8E-52 T 12-10-2018 IPR035952 Rhomboid-like superfamily BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 SMART SM00028 463 496 37.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04865 972744c52de10606a3d2f2fc86b7d284 512 SMART SM00028 429 462 0.042 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09720 4ee3df422372bab03d738a7090524872 347 Pfam PF02805 Metal binding domain of Ada 11 73 6.9E-27 T 12-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 BEN31_09720 4ee3df422372bab03d738a7090524872 347 Pfam PF12833 Helix-turn-helix domain 106 179 2.9E-13 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_09720 4ee3df422372bab03d738a7090524872 347 PIRSF PIRSF000409 1 347 6.5E-137 T 12-10-2018 IPR016221 Bifunctional regulatory protein Ada BEN31_09720 4ee3df422372bab03d738a7090524872 347 Gene3D G3DSA:3.30.160.70 183 260 3.5E-9 T 12-10-2018 BEN31_09720 4ee3df422372bab03d738a7090524872 347 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 265 344 1.1E-31 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BEN31_09720 4ee3df422372bab03d738a7090524872 347 Gene3D G3DSA:3.40.10.10 2 75 1.2E-25 T 12-10-2018 IPR035451 Ada-like domain superfamily BEN31_09720 4ee3df422372bab03d738a7090524872 347 SUPERFAMILY SSF46767 264 345 3.4E-29 T 12-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 BEN31_09720 4ee3df422372bab03d738a7090524872 347 SUPERFAMILY SSF57884 2 86 4.97E-31 T 12-10-2018 IPR035451 Ada-like domain superfamily BEN31_09720 4ee3df422372bab03d738a7090524872 347 SUPERFAMILY SSF53155 186 269 1.02E-11 T 12-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN31_09720 4ee3df422372bab03d738a7090524872 347 SMART SM00342 98 179 5.7E-10 T 12-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 BEN31_09720 4ee3df422372bab03d738a7090524872 347 Gene3D G3DSA:1.10.10.10 262 346 5.3E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_09720 4ee3df422372bab03d738a7090524872 347 Gene3D G3DSA:1.10.10.60 81 182 2.7E-13 T 12-10-2018 BEN31_09720 4ee3df422372bab03d738a7090524872 347 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 266 345 3.3E-30 T 12-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 BEN31_09720 4ee3df422372bab03d738a7090524872 347 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 315 321 - T 12-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 BEN31_08820 4af379252e7068366d6cf325ff7c77c5 185 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 6.1E-59 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BEN31_08820 4af379252e7068366d6cf325ff7c77c5 185 PIRSF PIRSF004553 1 183 4.8E-50 T 12-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 BEN31_08820 4af379252e7068366d6cf325ff7c77c5 185 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 12-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 BEN31_08820 4af379252e7068366d6cf325ff7c77c5 185 Gene3D G3DSA:3.40.50.150 1 185 7.1E-58 T 12-10-2018 BEN31_08820 4af379252e7068366d6cf325ff7c77c5 185 SUPERFAMILY SSF53335 1 181 1.3E-48 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_08820 4af379252e7068366d6cf325ff7c77c5 185 Pfam PF03602 Conserved hypothetical protein 95 1 181 2.7E-58 T 12-10-2018 BEN31_00505 65636b216d8734967d5ffc29025e5e92 228 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 18 217 2.1E-61 T 12-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like BEN31_00505 65636b216d8734967d5ffc29025e5e92 228 SUPERFAMILY SSF51161 10 223 1.07E-47 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_00505 65636b216d8734967d5ffc29025e5e92 228 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 115 149 9.6E-5 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_00505 65636b216d8734967d5ffc29025e5e92 228 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 175 203 5.1E-5 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_00505 65636b216d8734967d5ffc29025e5e92 228 Gene3D G3DSA:2.160.10.10 104 212 3.6E-28 T 12-10-2018 BEN31_00505 65636b216d8734967d5ffc29025e5e92 228 Gene3D G3DSA:3.40.50.20 12 99 1.6E-11 T 12-10-2018 BEN31_00505 65636b216d8734967d5ffc29025e5e92 228 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 178 206 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BEN31_15535 72fe839396fc8e90e968f88a9309caf5 247 Pfam PF05175 Methyltransferase small domain 34 173 2.2E-11 T 12-10-2018 IPR007848 Methyltransferase small domain GO:0008168 BEN31_15535 72fe839396fc8e90e968f88a9309caf5 247 SUPERFAMILY SSF53335 15 199 3.03E-32 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_15535 72fe839396fc8e90e968f88a9309caf5 247 Gene3D G3DSA:3.40.50.150 8 247 3.2E-74 T 12-10-2018 BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 367 375 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 Gene3D G3DSA:3.20.20.80 10 467 2.4E-159 T 12-10-2018 BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 SUPERFAMILY SSF51445 7 462 4.94E-170 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 Pfam PF00232 Glycosyl hydrolase family 1 10 468 4.2E-146 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 367 375 4.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 4.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 4.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 4.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_05355 f9f27e3ea4539d49c78d5905d984ba57 468 PRINTS PR00131 Glycosyl hydrolase family 1 signature 295 309 4.7E-17 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_13600 a8df0459bf72ebeabca2de8d0fd1b207 203 Gene3D G3DSA:3.40.50.150 9 193 5.7E-26 T 12-10-2018 BEN31_13600 a8df0459bf72ebeabca2de8d0fd1b207 203 Pfam PF13649 Methyltransferase domain 47 143 5.0E-15 T 12-10-2018 BEN31_13600 a8df0459bf72ebeabca2de8d0fd1b207 203 SUPERFAMILY SSF53335 28 163 9.67E-26 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 Pfam PF00672 HAMP domain 214 262 2.6E-13 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 SUPERFAMILY SSF58104 234 570 1.28E-65 T 12-10-2018 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 SMART SM00304 214 266 1.5E-15 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 420 2.6E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 2.6E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 2.6E-20 T 12-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 SMART SM00283 295 570 5.6E-68 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 Gene3D G3DSA:1.10.287.950 274 570 1.0E-64 T 12-10-2018 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 523 6.8E-42 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_12080 3492adb16a6eb022fe7f2b0236898801 574 Gene3D G3DSA:1.20.1480.50 179 273 3.4E-15 T 12-10-2018 BEN31_04475 96a8a7e908bb4a4bb3c75572a7d12158 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 1.8E-11 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_04475 96a8a7e908bb4a4bb3c75572a7d12158 189 SUPERFAMILY SSF52374 1 187 2.81E-56 T 12-10-2018 BEN31_04475 96a8a7e908bb4a4bb3c75572a7d12158 189 Gene3D G3DSA:3.40.50.620 1 188 8.5E-68 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_04475 96a8a7e908bb4a4bb3c75572a7d12158 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 2.0E-59 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BEN31_04475 96a8a7e908bb4a4bb3c75572a7d12158 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 33.064 T 12-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 BEN31_04475 96a8a7e908bb4a4bb3c75572a7d12158 189 Pfam PF01467 Cytidylyltransferase-like 6 162 3.6E-34 T 12-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 BEN31_04190 396a992475b097e93367e6bd33de3eee 44 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 43 8.6E-18 T 12-10-2018 IPR012655 Uncharacterised protein YrzI BEN31_08130 bbad49ca0670c902e444d168b824b317 219 Pfam PF04347 Flagellar biosynthesis protein, FliO 94 180 9.9E-12 T 12-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 BEN31_13085 ce0ed9f2981e15c5fed6606da06e6f2f 157 Gene3D G3DSA:3.40.630.30 1 146 2.3E-27 T 12-10-2018 BEN31_13085 ce0ed9f2981e15c5fed6606da06e6f2f 157 SUPERFAMILY SSF55729 1 138 5.4E-28 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_13085 ce0ed9f2981e15c5fed6606da06e6f2f 157 Pfam PF00583 Acetyltransferase (GNAT) family 34 132 1.9E-16 T 12-10-2018 IPR000182 GNAT domain BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 Gene3D G3DSA:3.40.50.720 134 336 1.0E-152 T 12-10-2018 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 SUPERFAMILY SSF53223 4 143 2.14E-49 T 12-10-2018 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 1.3E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 1.3E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 1.3E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.3E-22 T 12-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 SUPERFAMILY SSF51735 141 348 1.75E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 130 9.4E-28 T 12-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 12-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 8.9E-7 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 313 1.1E-8 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 SMART SM00839 144 351 4.4E-71 T 12-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 PIRSF PIRSF000188 1 353 3.1E-167 T 12-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 BEN31_05220 bfb0ff94968fedfdde409d969e52880e 364 Gene3D G3DSA:3.40.50.10860 10 343 1.0E-152 T 12-10-2018 BEN31_13320 1dd9a965dd397a0d0e18209d932ec7d2 109 SUPERFAMILY SSF52091 3 105 4.32E-25 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13320 1dd9a965dd397a0d0e18209d932ec7d2 109 Pfam PF13466 STAS domain 16 94 8.9E-16 T 12-10-2018 IPR002645 STAS domain BEN31_13320 1dd9a965dd397a0d0e18209d932ec7d2 109 Gene3D G3DSA:3.30.750.24 2 109 1.4E-25 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_13320 1dd9a965dd397a0d0e18209d932ec7d2 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 105 1.3E-29 T 12-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 BEN31_04335 0e853bdb08d5c40113bb9f571a002bf6 97 Pfam PF11122 Inner spore coat protein D 22 83 5.9E-16 T 12-10-2018 IPR020108 Spore coat protein CotD BEN31_17790 af65c303a93adde6b08a81e58314235c 395 SUPERFAMILY SSF103473 1 387 9.55E-62 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_17790 af65c303a93adde6b08a81e58314235c 395 Pfam PF07690 Major Facilitator Superfamily 14 251 4.7E-30 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_17790 af65c303a93adde6b08a81e58314235c 395 Gene3D G3DSA:1.20.1250.20 4 380 2.0E-52 T 12-10-2018 BEN31_03445 84a0f4958aaa3634f8e6377f86ba1939 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 3.6E-15 T 12-10-2018 IPR007140 Protein of unknown function DUF350 BEN31_03445 84a0f4958aaa3634f8e6377f86ba1939 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 6.9E-13 T 12-10-2018 IPR007140 Protein of unknown function DUF350 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 Gene3D G3DSA:1.25.40.10 1 377 1.4E-107 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 Pfam PF13181 Tetratricopeptide repeat 342 363 0.061 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 Pfam PF13181 Tetratricopeptide repeat 220 248 0.16 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 SUPERFAMILY SSF48452 102 323 1.99E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 SMART SM00028 219 252 0.014 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 SMART SM00028 335 368 180.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 SMART SM00028 179 212 2.3 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_09975 84670d35ebcac9083d6cae8a94656859 377 SMART SM00028 138 171 28.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_03045 9725d6d8059d3ebab24f8424ce14a5e2 450 Gene3D G3DSA:2.30.40.10 11 421 6.0E-107 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_03045 9725d6d8059d3ebab24f8424ce14a5e2 450 SUPERFAMILY SSF51556 57 367 8.11E-62 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_03045 9725d6d8059d3ebab24f8424ce14a5e2 450 SUPERFAMILY SSF51338 3 440 2.24E-27 T 12-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 BEN31_03045 9725d6d8059d3ebab24f8424ce14a5e2 450 Pfam PF01979 Amidohydrolase family 54 415 6.2E-28 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN31_03045 9725d6d8059d3ebab24f8424ce14a5e2 450 Gene3D G3DSA:3.20.20.140 59 426 6.0E-107 T 12-10-2018 BEN31_11585 4552ffd070661820eb873d7ff9025427 155 Gene3D G3DSA:3.40.30.10 2 155 9.8E-53 T 12-10-2018 BEN31_11585 4552ffd070661820eb873d7ff9025427 155 SUPERFAMILY SSF52833 3 154 2.44E-52 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_11585 4552ffd070661820eb873d7ff9025427 155 PIRSF PIRSF000239 1 154 5.3E-27 T 12-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_11585 4552ffd070661820eb873d7ff9025427 155 Pfam PF00578 AhpC/TSA family 5 132 1.5E-38 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_07740 3449abb67bab33398dc287bf43cf2a36 178 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 13 166 2.0E-47 T 12-10-2018 IPR034650 YuaB-like BEN31_07740 3449abb67bab33398dc287bf43cf2a36 178 Gene3D G3DSA:2.60.40.3490 40 168 2.8E-48 T 12-10-2018 IPR038480 YuaB-like superfamily BEN31_13790 51b13f466222bb17f5d3d6d3299d25af 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 2.8E-62 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_13790 51b13f466222bb17f5d3d6d3299d25af 264 Gene3D G3DSA:3.40.190.10 116 217 4.0E-64 T 12-10-2018 BEN31_13790 51b13f466222bb17f5d3d6d3299d25af 264 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site BEN31_13790 51b13f466222bb17f5d3d6d3299d25af 264 Gene3D G3DSA:3.40.190.10 40 254 4.0E-64 T 12-10-2018 BEN31_13790 51b13f466222bb17f5d3d6d3299d25af 264 SMART SM00062 34 257 1.8E-77 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_13790 51b13f466222bb17f5d3d6d3299d25af 264 SUPERFAMILY SSF53850 4 258 4.91E-68 T 12-10-2018 BEN31_13790 51b13f466222bb17f5d3d6d3299d25af 264 SMART SM00079 34 256 3.7E-4 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 SUPERFAMILY SSF48256 2 371 1.96E-131 T 12-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 12-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 PIRSF PIRSF001369 1 372 3.4E-155 T 12-10-2018 IPR024176 Citrate synthase, bacterial-type BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 Gene3D G3DSA:1.10.230.10 220 318 1.1E-124 T 12-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 2.1E-126 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 Gene3D G3DSA:1.10.580.10 24 343 1.1E-124 T 12-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 7.3E-164 T 12-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 PRINTS PR00143 Citrate synthase signature 123 136 6.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 PRINTS PR00143 Citrate synthase signature 304 320 6.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 PRINTS PR00143 Citrate synthase signature 194 222 6.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 PRINTS PR00143 Citrate synthase signature 324 338 6.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 PRINTS PR00143 Citrate synthase signature 247 267 6.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_03245 ac250b5c39e32aa04e4dafae3dda0005 372 PRINTS PR00143 Citrate synthase signature 172 187 6.5E-41 T 12-10-2018 IPR002020 Citrate synthase GO:0046912 BEN31_09190 2696bce4793b2a793abee48c4ac44596 269 Gene3D G3DSA:3.30.70.100 177 262 1.8E-22 T 12-10-2018 BEN31_09190 2696bce4793b2a793abee48c4ac44596 269 SUPERFAMILY SSF82861 21 109 2.75E-15 T 12-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 BEN31_09190 2696bce4793b2a793abee48c4ac44596 269 Gene3D G3DSA:2.30.30.60 126 175 2.5E-20 T 12-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily BEN31_09190 2696bce4793b2a793abee48c4ac44596 269 SUPERFAMILY SSF50182 111 169 1.47E-15 T 12-10-2018 IPR010920 LSM domain superfamily BEN31_09190 2696bce4793b2a793abee48c4ac44596 269 Pfam PF00924 Mechanosensitive ion channel 68 259 2.6E-45 T 12-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 BEN31_09190 2696bce4793b2a793abee48c4ac44596 269 SUPERFAMILY SSF82689 174 259 3.66E-10 T 12-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 BEN31_14160 cc58a483ee3f4a547f44d152d926c373 538 Pfam PF14266 Putative component of 'biosynthetic module' 41 526 4.3E-162 T 12-10-2018 IPR025647 Putative component of 'biosynthetic module' BEN31_13715 55392b46a9978134091f37462ffa18f2 198 Gene3D G3DSA:3.40.50.360 1 194 4.1E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_13715 55392b46a9978134091f37462ffa18f2 198 SUPERFAMILY SSF52218 1 195 8.21E-44 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_13715 55392b46a9978134091f37462ffa18f2 198 Pfam PF02525 Flavodoxin-like fold 1 189 1.7E-41 T 12-10-2018 IPR003680 Flavodoxin-like fold BEN31_14045 03626c4d4280c71f556faee5515e6eec 458 SUPERFAMILY SSF103473 26 455 1.7E-85 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14045 03626c4d4280c71f556faee5515e6eec 458 Gene3D G3DSA:1.10.286.90 218 249 4.0E-8 T 12-10-2018 BEN31_14045 03626c4d4280c71f556faee5515e6eec 458 Pfam PF00083 Sugar (and other) transporter 72 456 1.8E-50 T 12-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 BEN31_14045 03626c4d4280c71f556faee5515e6eec 458 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 12-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 BEN31_02500 402ff3ecaec1d4a5bb9c01e84fd90db7 74 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 3.0E-23 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN31_02500 402ff3ecaec1d4a5bb9c01e84fd90db7 74 Pfam PF01809 Haemolytic domain 2 68 6.3E-33 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN31_02500 402ff3ecaec1d4a5bb9c01e84fd90db7 74 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 73 6.4E-38 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN31_02500 402ff3ecaec1d4a5bb9c01e84fd90db7 74 SMART SM01234 1 68 3.1E-50 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN31_02500 402ff3ecaec1d4a5bb9c01e84fd90db7 74 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 26.089 T 12-10-2018 IPR002696 Putative membrane protein insertion efficiency factor BEN31_13125 2e81dfa34c639c85070b433e84196659 122 Pfam PF17094 Uncharacterised protein family (UPF0715) 12 113 1.5E-7 T 12-10-2018 IPR031374 Uncharacterised protein family UPF0715 BEN31_16475 ba94833e955c518180811c142215dc84 335 Gene3D G3DSA:3.30.450.40 3 149 5.8E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_16475 ba94833e955c518180811c142215dc84 335 SMART SM00421 275 332 7.4E-17 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_16475 ba94833e955c518180811c142215dc84 335 Pfam PF00196 Bacterial regulatory proteins, luxR family 277 329 3.7E-15 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_16475 ba94833e955c518180811c142215dc84 335 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 278 292 5.4E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_16475 ba94833e955c518180811c142215dc84 335 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 292 308 5.4E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_16475 ba94833e955c518180811c142215dc84 335 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 308 320 5.4E-10 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_16475 ba94833e955c518180811c142215dc84 335 ProSitePatterns PS00622 LuxR-type HTH domain signature. 292 319 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_16475 ba94833e955c518180811c142215dc84 335 SUPERFAMILY SSF46894 264 332 5.1E-16 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_16475 ba94833e955c518180811c142215dc84 335 Gene3D G3DSA:1.10.10.10 247 335 2.9E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_17885 335d9453521eea9be08f5889881a0b32 256 Gene3D G3DSA:3.30.1330.80 22 238 2.3E-83 T 12-10-2018 BEN31_17885 335d9453521eea9be08f5889881a0b32 256 SUPERFAMILY SSF117856 21 251 1.64E-85 T 12-10-2018 BEN31_17885 335d9453521eea9be08f5889881a0b32 256 Pfam PF03306 Alpha-acetolactate decarboxylase 22 239 4.5E-85 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BEN31_17885 335d9453521eea9be08f5889881a0b32 256 PIRSF PIRSF001332 6 252 2.4E-97 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BEN31_17885 335d9453521eea9be08f5889881a0b32 256 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 21 251 2.4E-100 T 12-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 BEN31_17885 335d9453521eea9be08f5889881a0b32 256 Gene3D G3DSA:3.30.1330.80 97 219 2.3E-83 T 12-10-2018 BEN31_16120 453614a4cb186ade31f2d80204b0b458 185 Gene3D G3DSA:1.10.1760.20 1 176 4.9E-23 T 12-10-2018 BEN31_16120 453614a4cb186ade31f2d80204b0b458 185 Hamap MF_01572 UPF0397 protein . 4 183 26.803 T 12-10-2018 IPR022914 Protein of unknown function UPF0397 BEN31_16120 453614a4cb186ade31f2d80204b0b458 185 Pfam PF07155 ECF-type riboflavin transporter, S component 6 172 8.6E-53 T 12-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 BEN31_01200 fa3149cb94a6d137aac191730ce7fffe 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 181 3.0E-67 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN31_01200 fa3149cb94a6d137aac191730ce7fffe 190 Pfam PF01923 Cobalamin adenosyltransferase 4 168 2.2E-55 T 12-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN31_01200 fa3149cb94a6d137aac191730ce7fffe 190 Gene3D G3DSA:1.20.1200.10 12 190 2.9E-62 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN31_01200 fa3149cb94a6d137aac191730ce7fffe 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 180 8.3E-61 T 12-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN31_01200 fa3149cb94a6d137aac191730ce7fffe 190 SUPERFAMILY SSF89028 1 180 2.35E-62 T 12-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 BEN31_08135 1e361371eede1f8fedda24f51fce78db 120 Gene3D G3DSA:3.40.50.2300 2 120 3.6E-40 T 12-10-2018 BEN31_08135 1e361371eede1f8fedda24f51fce78db 120 Pfam PF00072 Response regulator receiver domain 5 116 1.6E-33 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_08135 1e361371eede1f8fedda24f51fce78db 120 SMART SM00448 3 115 6.0E-40 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_08135 1e361371eede1f8fedda24f51fce78db 120 SUPERFAMILY SSF52172 4 119 4.27E-40 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_13450 bb4dc13dfe53a66ab6c9ec6d2f6b1238 227 PIRSF PIRSF006171 2 227 7.1E-79 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BEN31_13450 bb4dc13dfe53a66ab6c9ec6d2f6b1238 227 SMART SM00448 4 117 9.8E-31 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_13450 bb4dc13dfe53a66ab6c9ec6d2f6b1238 227 Pfam PF00072 Response regulator receiver domain 6 117 7.8E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_13450 bb4dc13dfe53a66ab6c9ec6d2f6b1238 227 SUPERFAMILY SSF52172 1 161 9.68E-34 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_13450 bb4dc13dfe53a66ab6c9ec6d2f6b1238 227 Gene3D G3DSA:3.40.50.12740 4 212 4.0E-34 T 12-10-2018 BEN31_13450 bb4dc13dfe53a66ab6c9ec6d2f6b1238 227 SUPERFAMILY SSF46785 170 209 5.69E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07970 1a9493255d394c6b3df26cf9956ebc2d 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 95 7.9E-19 T 12-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 BEN31_07970 1a9493255d394c6b3df26cf9956ebc2d 100 SUPERFAMILY SSF55315 6 99 1.26E-25 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_07970 1a9493255d394c6b3df26cf9956ebc2d 100 Gene3D G3DSA:3.30.1330.30 2 100 2.9E-40 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_14335 c4a4bdd3026a2a6881ed7a9d7c1287e5 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 54 4.6E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14335 c4a4bdd3026a2a6881ed7a9d7c1287e5 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 3.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14335 c4a4bdd3026a2a6881ed7a9d7c1287e5 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 3.5E-5 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_14335 c4a4bdd3026a2a6881ed7a9d7c1287e5 187 Gene3D G3DSA:1.10.357.10 1 186 1.8E-52 T 12-10-2018 BEN31_14335 c4a4bdd3026a2a6881ed7a9d7c1287e5 187 SUPERFAMILY SSF48498 74 182 1.89E-14 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_14335 c4a4bdd3026a2a6881ed7a9d7c1287e5 187 SUPERFAMILY SSF46689 2 69 6.67E-18 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_13110 5606a01fe4750ca6cf34b4ea0eb933b2 150 SUPERFAMILY SSF46785 24 147 4.75E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13110 5606a01fe4750ca6cf34b4ea0eb933b2 150 Gene3D G3DSA:1.10.10.10 18 149 7.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_13110 5606a01fe4750ca6cf34b4ea0eb933b2 150 Pfam PF12802 MarR family 47 96 2.0E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_13110 5606a01fe4750ca6cf34b4ea0eb933b2 150 SMART SM00347 31 132 5.3E-6 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_04455 c2191b54413245cf673c7bb6294247d4 173 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 4 169 3.6E-62 T 12-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like BEN31_04455 c2191b54413245cf673c7bb6294247d4 173 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 137 4.6E-10 T 12-10-2018 BEN31_04455 c2191b54413245cf673c7bb6294247d4 173 SUPERFAMILY SSF56784 2 151 1.6E-23 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_04455 c2191b54413245cf673c7bb6294247d4 173 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 39 131 3.1E-6 T 12-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 BEN31_04455 c2191b54413245cf673c7bb6294247d4 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 8.0E-24 T 12-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 BEN31_04455 c2191b54413245cf673c7bb6294247d4 173 Gene3D G3DSA:3.40.50.1000 18 152 1.4E-22 T 12-10-2018 IPR023214 HAD superfamily BEN31_07545 11e1c819c7ec30741751ad0f999a1b71 621 Gene3D G3DSA:3.90.920.30 331 605 8.8E-80 T 12-10-2018 BEN31_07545 11e1c819c7ec30741751ad0f999a1b71 621 Pfam PF01068 ATP dependent DNA ligase domain 15 207 3.7E-29 T 12-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 BEN31_07545 11e1c819c7ec30741751ad0f999a1b71 621 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 323 563 1.3E-85 T 12-10-2018 IPR014145 DNA ligase D, polymerase domain BEN31_07545 11e1c819c7ec30741751ad0f999a1b71 621 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 12 591 1.5E-173 T 12-10-2018 IPR014143 DNA ligase D BEN31_07545 11e1c819c7ec30741751ad0f999a1b71 621 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 3 308 4.9E-69 T 12-10-2018 IPR014146 DNA ligase D, ligase domain BEN31_07545 11e1c819c7ec30741751ad0f999a1b71 621 SUPERFAMILY SSF56091 3 207 1.87E-32 T 12-10-2018 BEN31_07545 11e1c819c7ec30741751ad0f999a1b71 621 Gene3D G3DSA:3.30.470.30 1 207 6.4E-38 T 12-10-2018 BEN31_04980 f06e9cde57341962be25c120f3a1775a 175 TIGRFAM TIGR04087 YqxM_for_SipW: YqxM protein 5 174 1.2E-52 T 12-10-2018 IPR023848 TasA anchoring/assembly protein GO:0062039 BEN31_04980 f06e9cde57341962be25c120f3a1775a 175 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 14 44 5.0E-5 T 12-10-2018 IPR023833 Signal peptide, camelysin BEN31_07445 a8e6e6022081c31b313e9b2c6174999d 103 Pfam PF01476 LysM domain 39 88 2.0E-8 T 12-10-2018 IPR018392 LysM domain BEN31_07445 a8e6e6022081c31b313e9b2c6174999d 103 Hamap MF_02014 Cell division suppressor protein YneA [yneA]. 2 102 27.745 T 12-10-2018 IPR022887 Cell division suppressor protein, YneA BEN31_07445 a8e6e6022081c31b313e9b2c6174999d 103 SMART SM00257 37 88 4.3E-5 T 12-10-2018 IPR018392 LysM domain BEN31_07445 a8e6e6022081c31b313e9b2c6174999d 103 Gene3D G3DSA:3.10.350.10 25 95 6.2E-10 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_07445 a8e6e6022081c31b313e9b2c6174999d 103 SUPERFAMILY SSF54106 39 89 3.79E-5 T 12-10-2018 BEN31_03895 71b774a8a109eabc20c2c4ff63a6c768 214 SUPERFAMILY SSF56112 30 163 4.65E-19 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_03895 71b774a8a109eabc20c2c4ff63a6c768 214 Gene3D G3DSA:3.30.200.20 31 95 7.4E-10 T 12-10-2018 BEN31_03895 71b774a8a109eabc20c2c4ff63a6c768 214 Gene3D G3DSA:1.10.510.10 60 159 7.4E-10 T 12-10-2018 BEN31_00255 496160525ceae6b9039cef71601bbfef 276 Pfam PF06152 Phage minor capsid protein 2 49 267 5.0E-17 T 12-10-2018 IPR009319 Bacteriophage A118, Gp4, minor capsid GO:0005198 BEN31_01900 1dd83a3f558f8c3d732706d8bc188459 391 Gene3D G3DSA:3.90.1150.10 11 382 1.5E-147 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_01900 1dd83a3f558f8c3d732706d8bc188459 391 Pfam PF00155 Aminotransferase class I and II 41 382 2.7E-40 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_01900 1dd83a3f558f8c3d732706d8bc188459 391 SUPERFAMILY SSF53383 9 386 9.21E-99 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_01900 1dd83a3f558f8c3d732706d8bc188459 391 Gene3D G3DSA:3.40.640.10 66 290 1.5E-147 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_01900 1dd83a3f558f8c3d732706d8bc188459 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 3 386 2.0E-150 T 12-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 BEN31_13795 0a74e8360140acc5abd4f012ed6d8f56 167 SUPERFAMILY SSF55729 5 158 2.57E-16 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_13795 0a74e8360140acc5abd4f012ed6d8f56 167 Gene3D G3DSA:3.40.630.30 2 162 2.6E-18 T 12-10-2018 BEN31_09020 64eedc52be8e07f0ba6e3391733cfc71 222 SUPERFAMILY SSF140423 25 214 1.15E-51 T 12-10-2018 IPR036785 YkyA-like superfamily BEN31_09020 64eedc52be8e07f0ba6e3391733cfc71 222 Gene3D G3DSA:1.20.120.570 24 214 5.5E-42 T 12-10-2018 IPR036785 YkyA-like superfamily BEN31_09020 64eedc52be8e07f0ba6e3391733cfc71 222 Pfam PF10368 Putative cell-wall binding lipoprotein 17 216 1.1E-64 T 12-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like BEN31_16215 3fe386cfd6f584d0147bd1ad23a421e4 326 PIRSF PIRSF031853 1 326 6.1E-117 T 12-10-2018 IPR016984 Uncharacterised conserved protein UCP031853 BEN31_16215 3fe386cfd6f584d0147bd1ad23a421e4 326 SUPERFAMILY SSF52980 195 306 2.68E-15 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN31_16215 3fe386cfd6f584d0147bd1ad23a421e4 326 Pfam PF04471 Restriction endonuclease 191 302 4.6E-27 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 BEN31_08515 f6e3f22e2f50c1ce2025fef146a74bf7 233 Gene3D G3DSA:3.40.50.620 7 233 1.9E-74 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_08515 f6e3f22e2f50c1ce2025fef146a74bf7 233 SUPERFAMILY SSF52402 16 197 6.8E-53 T 12-10-2018 BEN31_08515 f6e3f22e2f50c1ce2025fef146a74bf7 233 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 209 4.8E-54 T 12-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 BEN31_08515 f6e3f22e2f50c1ce2025fef146a74bf7 233 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 43 231 1.5E-80 T 12-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 BEN31_08515 f6e3f22e2f50c1ce2025fef146a74bf7 233 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 233 1.2E-94 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BEN31_08515 f6e3f22e2f50c1ce2025fef146a74bf7 233 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 233 42.201 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BEN31_08515 f6e3f22e2f50c1ce2025fef146a74bf7 233 PIRSF PIRSF000857 5 233 2.4E-90 T 12-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 BEN31_04630 3faf0e2b53b7aec816d4f23ae37423ba 319 SUPERFAMILY SSF52540 66 279 9.4E-39 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_04630 3faf0e2b53b7aec816d4f23ae37423ba 319 Gene3D G3DSA:3.40.50.300 109 316 1.1E-75 T 12-10-2018 BEN31_04630 3faf0e2b53b7aec816d4f23ae37423ba 319 Pfam PF02562 PhoH-like protein 113 316 3.6E-95 T 12-10-2018 IPR003714 PhoH-like protein GO:0005524 BEN31_12990 c9e055fdb637abf5d1ebb5cc1c810f8e 339 Gene3D G3DSA:3.40.50.10740 2 159 2.2E-35 T 12-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal BEN31_12990 c9e055fdb637abf5d1ebb5cc1c810f8e 339 PIRSF PIRSF028757 1 337 8.1E-66 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_12990 c9e055fdb637abf5d1ebb5cc1c810f8e 339 SUPERFAMILY SSF141986 172 325 1.44E-27 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_12990 c9e055fdb637abf5d1ebb5cc1c810f8e 339 Gene3D G3DSA:3.50.30.60 160 337 5.6E-34 T 12-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily BEN31_12990 c9e055fdb637abf5d1ebb5cc1c810f8e 339 SUPERFAMILY SSF52317 1 162 9.15E-39 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_12990 c9e055fdb637abf5d1ebb5cc1c810f8e 339 Pfam PF02016 LD-carboxypeptidase 13 323 7.5E-68 T 12-10-2018 IPR003507 Peptidase family S66 BEN31_13010 6fbcd87c6acbcd7872b6d87b84e3070f 220 Pfam PF01596 O-methyltransferase 30 204 3.7E-40 T 12-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 BEN31_13010 6fbcd87c6acbcd7872b6d87b84e3070f 220 Gene3D G3DSA:3.40.50.150 1 220 1.5E-73 T 12-10-2018 BEN31_13010 6fbcd87c6acbcd7872b6d87b84e3070f 220 SUPERFAMILY SSF53335 4 205 3.66E-38 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_03840 393f524446b0b89c339e3c0c1b9e9b7f 147 Hamap MF_00707 UPF0735 ACT domain-containing protein . 2 146 31.711 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein BEN31_03840 393f524446b0b89c339e3c0c1b9e9b7f 147 Gene3D G3DSA:3.30.70.260 69 144 7.5E-8 T 12-10-2018 BEN31_03840 393f524446b0b89c339e3c0c1b9e9b7f 147 SUPERFAMILY SSF55021 70 143 2.19E-12 T 12-10-2018 BEN31_03840 393f524446b0b89c339e3c0c1b9e9b7f 147 Pfam PF01842 ACT domain 70 135 9.8E-11 T 12-10-2018 IPR002912 ACT domain BEN31_03840 393f524446b0b89c339e3c0c1b9e9b7f 147 PIRSF PIRSF025624 1 146 1.9E-61 T 12-10-2018 IPR008310 UPF0735 ACT domain-containing protein BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-21 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 Pfam PF03466 LysR substrate binding domain 90 287 1.1E-49 T 12-10-2018 IPR005119 LysR, substrate-binding BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 SUPERFAMILY SSF53850 90 291 2.07E-45 T 12-10-2018 BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-10 T 12-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 Gene3D G3DSA:3.40.190.290 93 291 3.7E-58 T 12-10-2018 BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 Gene3D G3DSA:1.10.10.10 1 92 2.1E-28 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16970 9c2ed35fe8d3aa51bc8719689fa976cb 295 SUPERFAMILY SSF46785 2 111 9.74E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 SUPERFAMILY SSF53067 147 328 1.34E-49 T 12-10-2018 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 Gene3D G3DSA:3.30.420.40 151 313 2.6E-128 T 12-10-2018 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 2.3E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 2.3E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 2.3E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 2.3E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 2.3E-59 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 SUPERFAMILY SSF53067 7 144 1.12E-36 T 12-10-2018 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 Pfam PF06723 MreB/Mbl protein 7 330 2.4E-147 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 Gene3D G3DSA:3.30.420.40 9 323 2.6E-128 T 12-10-2018 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 332 1.8E-159 T 12-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 BEN31_03780 0152b09e5520e749aeef5bee0b049518 339 Gene3D G3DSA:3.90.640.10 183 255 2.6E-128 T 12-10-2018 BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 3.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 3.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 3.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 3.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.0E-25 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 260 4.9E-38 T 12-10-2018 BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 Gene3D G3DSA:3.40.50.720 6 265 4.7E-63 T 12-10-2018 BEN31_17240 c746b8733a31ee005561fa24ad67e12e 265 SUPERFAMILY SSF51735 7 261 6.58E-59 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 Gene3D G3DSA:1.10.10.10 6 94 3.6E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 46 2.5E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 2.5E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 2.5E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 2.5E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 SMART SM00418 14 87 2.0E-28 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 SUPERFAMILY SSF46785 11 84 1.13E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07245 f9e8a2a706be81aeeac9865a2227f4d7 115 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 4.7E-19 T 12-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 BEN31_15885 82e40480a4806d0acbf1dbf347e39301 323 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 102 6.2E-16 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_15885 82e40480a4806d0acbf1dbf347e39301 323 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 162 272 2.0E-15 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_15885 82e40480a4806d0acbf1dbf347e39301 323 Gene3D G3DSA:3.10.180.10 73 216 2.2E-123 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_15885 82e40480a4806d0acbf1dbf347e39301 323 SUPERFAMILY SSF54593 11 284 1.14E-49 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_15885 82e40480a4806d0acbf1dbf347e39301 323 Gene3D G3DSA:3.10.180.10 13 307 2.2E-123 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_14195 c39739c83f69c6a2a09fc9cd4ca8f47a 193 Pfam PF02342 TerD domain 2 188 5.3E-83 T 12-10-2018 IPR003325 TerD domain BEN31_14195 c39739c83f69c6a2a09fc9cd4ca8f47a 193 Gene3D G3DSA:2.60.60.30 19 187 3.0E-71 T 12-10-2018 BEN31_11610 af95e5ebf80d9113c59dd54a838247fb 528 Gene3D G3DSA:3.90.76.10 51 203 5.8E-173 T 12-10-2018 BEN31_11610 af95e5ebf80d9113c59dd54a838247fb 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 447 4.3E-115 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BEN31_11610 af95e5ebf80d9113c59dd54a838247fb 528 PIRSF PIRSF002741 1 528 3.4E-144 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BEN31_11610 af95e5ebf80d9113c59dd54a838247fb 528 Gene3D G3DSA:3.10.105.10 286 503 5.8E-173 T 12-10-2018 BEN31_11610 af95e5ebf80d9113c59dd54a838247fb 528 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 12-10-2018 IPR023765 Solute-binding protein family 5, conserved site BEN31_11610 af95e5ebf80d9113c59dd54a838247fb 528 SUPERFAMILY SSF53850 34 527 1.26E-157 T 12-10-2018 BEN31_11610 af95e5ebf80d9113c59dd54a838247fb 528 Gene3D G3DSA:3.40.190.10 204 516 5.8E-173 T 12-10-2018 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 2.6E-51 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 2.6E-51 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 2.6E-51 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 2.6E-51 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 2.6E-51 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 2.6E-51 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 2.6E-51 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 Gene3D G3DSA:3.40.50.720 1 170 1.6E-71 T 12-10-2018 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 SUPERFAMILY SSF51735 4 168 1.64E-56 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 SUPERFAMILY SSF56327 173 439 1.98E-95 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 Gene3D G3DSA:3.90.110.10 171 442 3.1E-102 T 12-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 2.9E-71 T 12-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 12-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 BEN31_12335 cf02666326100c0cafe3b8101aff0239 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 4.1E-51 T 12-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 SUPERFAMILY SSF56322 18 497 4.97E-147 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 Gene3D G3DSA:3.60.120.10 1 502 9.6E-167 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 167 3.4E-28 T 12-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 493 2.5E-179 T 12-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 Pfam PF00425 chorismate binding enzyme 231 484 2.4E-96 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BEN31_05940 5870edff7cd386cf56426aebb864f462 515 PRINTS PR00095 Anthranilate synthase component I signature 332 345 1.2E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 PRINTS PR00095 Anthranilate synthase component I signature 441 455 1.2E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 PRINTS PR00095 Anthranilate synthase component I signature 426 440 1.2E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_05940 5870edff7cd386cf56426aebb864f462 515 PRINTS PR00095 Anthranilate synthase component I signature 346 359 1.2E-20 T 12-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 SMART SM00866 87 226 1.4E-27 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 Gene3D G3DSA:1.10.10.10 1 70 1.9E-20 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 SMART SM00345 7 66 7.3E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 Gene3D G3DSA:3.40.1410.10 71 235 1.4E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 2.9E-14 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 SUPERFAMILY SSF64288 54 230 9.89E-38 T 12-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 SUPERFAMILY SSF46785 5 75 1.05E-16 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_16200 673f5d9bf164c39498e88d1a98e24656 236 Pfam PF07702 UTRA domain 91 221 4.3E-26 T 12-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 BEN31_16310 62a85dc8c5e7b1229394c64fd9e4b427 392 SMART SM00028 129 162 22.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_16310 62a85dc8c5e7b1229394c64fd9e4b427 392 SMART SM00028 170 203 26.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_16310 62a85dc8c5e7b1229394c64fd9e4b427 392 SMART SM00028 210 242 220.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_16310 62a85dc8c5e7b1229394c64fd9e4b427 392 SUPERFAMILY SSF48452 89 286 6.95E-14 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_16310 62a85dc8c5e7b1229394c64fd9e4b427 392 Gene3D G3DSA:1.25.40.10 1 363 7.0E-76 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_01425 ac342bbbee63a8c639605bc9e05a3d1d 142 PIRSF PIRSF029598 1 142 2.3E-49 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 BEN31_01425 ac342bbbee63a8c639605bc9e05a3d1d 142 Pfam PF06146 Phosphate-starvation-inducible E 59 123 1.1E-17 T 12-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like BEN31_01425 ac342bbbee63a8c639605bc9e05a3d1d 142 Hamap MF_01048 Protein PsiE [psiE]. 2 137 24.028 T 12-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 BEN31_09115 3c052ec8ee1b9262af1067645bc9466f 397 Pfam PF02687 FtsX-like permease family 303 390 5.6E-12 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN31_09115 3c052ec8ee1b9262af1067645bc9466f 397 Pfam PF12704 MacB-like periplasmic core domain 21 235 1.2E-29 T 12-10-2018 IPR025857 MacB-like periplasmic core domain BEN31_07600 abb5c4dcb1972552c15b6fccf50f35a7 363 Pfam PF13424 Tetratricopeptide repeat 172 236 1.9E-7 T 12-10-2018 BEN31_07600 abb5c4dcb1972552c15b6fccf50f35a7 363 SUPERFAMILY SSF48452 88 285 2.15E-12 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_07600 abb5c4dcb1972552c15b6fccf50f35a7 363 Gene3D G3DSA:1.25.40.10 1 362 1.1E-86 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_03700 699ae0fe6262438bc13284bf792cbfd2 161 ProDom PD104119 YSXD OB2071 ORFY 1 161 1.0E-32 T 12-10-2018 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 49.178 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.7E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.7E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.7E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.7E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.7E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.7E-47 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 SUPERFAMILY SSF52096 6 313 4.4E-101 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 2.5E-65 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 319 7.9E-165 T 12-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 BEN31_03215 33f96a62affa88a70e65831d1f72bfa8 325 Gene3D G3DSA:3.90.226.10 2 316 2.4E-122 T 12-10-2018 BEN31_06900 a88138738b1d470063a75b538d64b89a 339 Gene3D G3DSA:3.20.20.30 7 337 3.9E-97 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_06900 a88138738b1d470063a75b538d64b89a 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 12 331 6.1E-135 T 12-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 BEN31_06900 a88138738b1d470063a75b538d64b89a 339 SUPERFAMILY SSF51679 11 331 7.18E-84 T 12-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 BEN31_06900 a88138738b1d470063a75b538d64b89a 339 Pfam PF00296 Luciferase-like monooxygenase 24 304 3.9E-37 T 12-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 BEN31_12795 381be1f063748825a761e052c60a1d4c 320 Gene3D G3DSA:1.10.8.300 202 310 7.5E-36 T 12-10-2018 BEN31_12795 381be1f063748825a761e052c60a1d4c 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 41 171 1.9E-66 T 12-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 BEN31_12795 381be1f063748825a761e052c60a1d4c 320 Gene3D G3DSA:3.40.50.300 22 188 1.6E-46 T 12-10-2018 BEN31_12795 381be1f063748825a761e052c60a1d4c 320 SUPERFAMILY SSF52540 10 285 2.55E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12795 381be1f063748825a761e052c60a1d4c 320 PIRSF PIRSF002849 3 315 8.6E-137 T 12-10-2018 BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 Gene3D G3DSA:3.30.70.250 1 84 4.4E-36 T 12-10-2018 BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 198 6.8E-8 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 Gene3D G3DSA:2.160.10.10 85 236 3.4E-50 T 12-10-2018 BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 45.308 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 SUPERFAMILY SSF51161 35 223 8.38E-50 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 1.3E-117 T 12-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 3.5E-4 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 2.4E-10 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 12-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 BEN31_09205 22a3a8d013449a4167b94935e707ec9c 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 1.5E-36 T 12-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 BEN31_10220 6d9d600239566ae692e59ddfb434ecbd 247 Gene3D G3DSA:3.60.21.10 1 246 2.1E-56 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_10220 6d9d600239566ae692e59ddfb434ecbd 247 SUPERFAMILY SSF56300 1 220 1.01E-35 T 12-10-2018 BEN31_10220 6d9d600239566ae692e59ddfb434ecbd 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 195 9.0E-13 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_15615 f7489d6a677833250851104f1360cf06 87 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 6 86 3.8E-23 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA BEN31_15615 f7489d6a677833250851104f1360cf06 87 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 13 83 4.5E-19 T 12-10-2018 IPR010001 SigmaK-factor processing regulatory BofA BEN31_01030 4a165f291031fc6ab8629d63c791122d 202 SUPERFAMILY SSF46689 4 79 7.98E-13 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_01030 4a165f291031fc6ab8629d63c791122d 202 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 82 195 1.0E-24 T 12-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal BEN31_01030 4a165f291031fc6ab8629d63c791122d 202 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 12-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site BEN31_01030 4a165f291031fc6ab8629d63c791122d 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 1.5E-9 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_01030 4a165f291031fc6ab8629d63c791122d 202 Gene3D G3DSA:1.10.357.10 5 201 6.6E-52 T 12-10-2018 BEN31_01030 4a165f291031fc6ab8629d63c791122d 202 SUPERFAMILY SSF48498 79 197 1.63E-27 T 12-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily BEN31_03720 c6385cc01bcfefa58da230381095c041 263 Gene3D G3DSA:3.40.50.10090 153 259 2.1E-20 T 12-10-2018 BEN31_03720 c6385cc01bcfefa58da230381095c041 263 SUPERFAMILY SSF69618 9 257 1.24E-61 T 12-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03720 c6385cc01bcfefa58da230381095c041 263 Pfam PF02602 Uroporphyrinogen-III synthase HemD 24 251 3.2E-50 T 12-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 BEN31_03720 c6385cc01bcfefa58da230381095c041 263 Gene3D G3DSA:3.40.50.10090 6 134 3.0E-25 T 12-10-2018 BEN31_16330 5e744297392aa93610687df90fb16284 417 Pfam PF07690 Major Facilitator Superfamily 15 372 2.8E-25 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_16330 5e744297392aa93610687df90fb16284 417 SUPERFAMILY SSF103473 11 403 1.96E-36 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_16330 5e744297392aa93610687df90fb16284 417 Gene3D G3DSA:1.20.1250.20 5 407 1.3E-35 T 12-10-2018 BEN31_07305 c06355665554ac1214a3db02ced4bb8c 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 240 259 - T 12-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 BEN31_07305 c06355665554ac1214a3db02ced4bb8c 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 349 8.2E-87 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_07305 c06355665554ac1214a3db02ced4bb8c 358 SUPERFAMILY SSF53659 2 354 8.0E-106 T 12-10-2018 BEN31_07305 c06355665554ac1214a3db02ced4bb8c 358 SMART SM01329 5 350 2.1E-144 T 12-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 BEN31_07305 c06355665554ac1214a3db02ced4bb8c 358 Gene3D G3DSA:3.40.718.10 1 358 2.8E-117 T 12-10-2018 BEN31_04915 1f189ece7aff9cdd5107d7835603850b 126 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 115 1.9E-40 T 12-10-2018 IPR006504 Transcriptional regulator Spx/MgsR BEN31_04915 1f189ece7aff9cdd5107d7835603850b 126 Gene3D G3DSA:3.40.30.10 4 125 1.9E-37 T 12-10-2018 BEN31_04915 1f189ece7aff9cdd5107d7835603850b 126 SUPERFAMILY SSF52833 3 115 1.7E-34 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_04915 1f189ece7aff9cdd5107d7835603850b 126 Pfam PF03960 ArsC family 7 112 2.8E-19 T 12-10-2018 IPR006660 Arsenate reductase-like BEN31_10970 933fdf4861fa43026640335a8b019047 294 Pfam PF13616 PPIC-type PPIASE domain 134 227 4.5E-25 T 12-10-2018 BEN31_10970 933fdf4861fa43026640335a8b019047 294 Gene3D G3DSA:3.10.50.40 135 227 1.5E-36 T 12-10-2018 BEN31_10970 933fdf4861fa43026640335a8b019047 294 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 281 20.029 T 12-10-2018 IPR023059 Foldase protein PrsA GO:0003755 BEN31_10970 933fdf4861fa43026640335a8b019047 294 SUPERFAMILY SSF109998 26 163 1.44E-17 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily BEN31_10970 933fdf4861fa43026640335a8b019047 294 SUPERFAMILY SSF54534 119 225 2.03E-27 T 12-10-2018 BEN31_18495 6479fc843b181a29629b99a7c1a52eb8 64 Pfam PF04024 PspC domain 2 61 4.2E-18 T 12-10-2018 IPR007168 Phage shock protein, PspC, N-terminal BEN31_13190 cc28665de6409bc8ea5cb1f7386fe6f1 168 Gene3D G3DSA:3.30.460.10 6 168 4.6E-49 T 12-10-2018 BEN31_13190 cc28665de6409bc8ea5cb1f7386fe6f1 168 Pfam PF04229 GrpB protein 9 167 7.1E-46 T 12-10-2018 IPR007344 GrpB/Dephospho-CoA kinase BEN31_13190 cc28665de6409bc8ea5cb1f7386fe6f1 168 SUPERFAMILY SSF81301 10 167 1.18E-45 T 12-10-2018 BEN31_02740 a3630f1a733803c54fc1e18882ad83d4 429 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 129 6.5E-19 T 12-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 BEN31_02740 a3630f1a733803c54fc1e18882ad83d4 429 Gene3D G3DSA:3.40.50.720 3 131 8.0E-18 T 12-10-2018 BEN31_02740 a3630f1a733803c54fc1e18882ad83d4 429 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 267 1.5E-25 T 12-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 BEN31_02740 a3630f1a733803c54fc1e18882ad83d4 429 SUPERFAMILY SSF51735 3 160 5.33E-32 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_02740 a3630f1a733803c54fc1e18882ad83d4 429 SUPERFAMILY SSF55347 134 360 1.32E-28 T 12-10-2018 BEN31_14330 c0977da8407c07711d90d453b18801b7 340 Gene3D G3DSA:2.60.120.10 23 194 2.9E-79 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_14330 c0977da8407c07711d90d453b18801b7 340 Gene3D G3DSA:2.60.120.10 15 314 2.9E-79 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_14330 c0977da8407c07711d90d453b18801b7 340 Pfam PF07883 Cupin domain 55 111 2.5E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BEN31_14330 c0977da8407c07711d90d453b18801b7 340 Pfam PF07883 Cupin domain 228 285 4.6E-13 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BEN31_14330 c0977da8407c07711d90d453b18801b7 340 SUPERFAMILY SSF51182 37 291 6.98E-32 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_17355 db70ce20dbfc593668ddcf5f3c1309f6 270 Pfam PF13688 Metallo-peptidase family M12 102 244 1.3E-27 T 12-10-2018 BEN31_17355 db70ce20dbfc593668ddcf5f3c1309f6 270 Gene3D G3DSA:3.40.390.10 91 265 1.0E-15 T 12-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 BEN31_17355 db70ce20dbfc593668ddcf5f3c1309f6 270 SUPERFAMILY SSF55486 104 250 5.06E-21 T 12-10-2018 BEN31_05580 cc5afbd657ecb7e816efce2e092fde85 150 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 7 145 1.5E-65 T 12-10-2018 IPR014203 Sporulation stage V, protein AC BEN31_05580 cc5afbd657ecb7e816efce2e092fde85 150 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 24 141 7.2E-41 T 12-10-2018 IPR005562 SpoVA BEN31_11615 f8a2c76d39ce2a8fb1716f1dc3133098 330 SMART SM00382 40 232 1.1E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_11615 f8a2c76d39ce2a8fb1716f1dc3133098 330 Pfam PF00005 ABC transporter 31 182 1.7E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_11615 f8a2c76d39ce2a8fb1716f1dc3133098 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 316 1.5E-21 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_11615 f8a2c76d39ce2a8fb1716f1dc3133098 330 Gene3D G3DSA:3.40.50.300 3 329 2.5E-99 T 12-10-2018 BEN31_11615 f8a2c76d39ce2a8fb1716f1dc3133098 330 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_11615 f8a2c76d39ce2a8fb1716f1dc3133098 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 296 4.4E-17 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_11615 f8a2c76d39ce2a8fb1716f1dc3133098 330 SUPERFAMILY SSF52540 6 252 9.84E-75 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10310 c72fc1b161cab2c06f82f1cff651ad11 359 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_10310 c72fc1b161cab2c06f82f1cff651ad11 359 SMART SM00382 35 243 1.3E-18 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_10310 c72fc1b161cab2c06f82f1cff651ad11 359 Pfam PF00005 ABC transporter 27 185 3.3E-30 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_10310 c72fc1b161cab2c06f82f1cff651ad11 359 Gene3D G3DSA:3.40.50.300 4 333 5.3E-98 T 12-10-2018 BEN31_10310 c72fc1b161cab2c06f82f1cff651ad11 359 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 323 3.9E-18 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_10310 c72fc1b161cab2c06f82f1cff651ad11 359 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 302 2.6E-12 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_10310 c72fc1b161cab2c06f82f1cff651ad11 359 SUPERFAMILY SSF52540 6 256 7.29E-73 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_02750 22cd0580da36baffbe44610f94d6c787 103 SMART SM00450 7 101 2.9E-18 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_02750 22cd0580da36baffbe44610f94d6c787 103 SUPERFAMILY SSF52821 2 101 1.03E-27 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_02750 22cd0580da36baffbe44610f94d6c787 103 Gene3D G3DSA:3.40.250.10 3 102 4.6E-28 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_02750 22cd0580da36baffbe44610f94d6c787 103 Pfam PF00581 Rhodanese-like domain 8 96 1.1E-13 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_11785 ade2dba4e6b6a00216cf2925a0ccf047 182 SUPERFAMILY SSF52833 42 123 2.64E-8 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_11785 ade2dba4e6b6a00216cf2925a0ccf047 182 Pfam PF14595 Thioredoxin 10 137 1.4E-43 T 12-10-2018 BEN31_11785 ade2dba4e6b6a00216cf2925a0ccf047 182 Gene3D G3DSA:3.40.30.10 1 182 4.0E-19 T 12-10-2018 BEN31_07570 6baebab7cbc81191f94eb18379f07828 123 Gene3D G3DSA:1.10.10.810 1 115 1.0E-49 T 12-10-2018 BEN31_07570 6baebab7cbc81191f94eb18379f07828 123 Pfam PF08818 Domain of unknown function (DU1801) 18 110 1.4E-12 T 12-10-2018 IPR014922 Domain of unknown function DUF1801 BEN31_07570 6baebab7cbc81191f94eb18379f07828 123 SUPERFAMILY SSF159888 1 123 3.4E-40 T 12-10-2018 BEN31_16755 dc00a8ced061b6cdd44490b5a98b7ffd 110 SUPERFAMILY SSF46785 5 100 4.23E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_16755 dc00a8ced061b6cdd44490b5a98b7ffd 110 Pfam PF01638 HxlR-like helix-turn-helix 15 99 6.2E-28 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_16755 dc00a8ced061b6cdd44490b5a98b7ffd 110 Gene3D G3DSA:1.10.10.10 2 109 1.6E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_06210 616f720b7a9d2ad7d199360d078f3e5d 194 SUPERFAMILY SSF53271 1 188 2.86E-45 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_06210 616f720b7a9d2ad7d199360d078f3e5d 194 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.387 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 BEN31_06210 616f720b7a9d2ad7d199360d078f3e5d 194 Pfam PF00156 Phosphoribosyl transferase domain 50 157 3.9E-6 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_06210 616f720b7a9d2ad7d199360d078f3e5d 194 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 191 9.5E-91 T 12-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 BEN31_06210 616f720b7a9d2ad7d199360d078f3e5d 194 Gene3D G3DSA:3.40.50.2020 3 188 3.6E-52 T 12-10-2018 BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 Gene3D G3DSA:3.40.50.720 2 287 1.1E-87 T 12-10-2018 BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 284 2.1E-61 T 12-10-2018 BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 SUPERFAMILY SSF51735 44 287 3.48E-81 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 1.5E-34 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 1.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 1.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_13595 b63d51c5195ccce570ec26c8ae92fea7 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 1.6E-9 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_18420 beb35374e810cd99f0991167812037de 224 SUPERFAMILY SSF55469 11 222 3.27E-55 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_18420 beb35374e810cd99f0991167812037de 224 Gene3D G3DSA:3.40.109.10 6 224 5.4E-61 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_18420 beb35374e810cd99f0991167812037de 224 Pfam PF00881 Nitroreductase family 16 202 2.0E-26 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN31_06680 42609636a0846f951662596679b6e1bc 478 Gene3D G3DSA:1.10.4100.10 23 456 5.6E-184 T 12-10-2018 BEN31_06680 42609636a0846f951662596679b6e1bc 478 Pfam PF03972 MmgE/PrpD family 15 459 2.2E-145 T 12-10-2018 IPR005656 MmgE/PrpD GO:0016829 BEN31_06680 42609636a0846f951662596679b6e1bc 478 SUPERFAMILY SSF103378 10 477 7.06E-149 T 12-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 BEN31_06680 42609636a0846f951662596679b6e1bc 478 Gene3D G3DSA:3.30.1330.120 283 421 5.6E-184 T 12-10-2018 BEN31_06680 42609636a0846f951662596679b6e1bc 478 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 11 478 1.3E-246 T 12-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 BEN31_05475 8488a81730537a4b45456e28f398728c 310 SUPERFAMILY SSF53474 47 300 2.1E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_05475 8488a81730537a4b45456e28f398728c 310 Pfam PF12146 Serine aminopeptidase, S33 82 195 3.3E-11 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BEN31_05475 8488a81730537a4b45456e28f398728c 310 Gene3D G3DSA:3.40.50.1820 52 309 4.8E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_06370 13226f26d6c84178b0b6503300c6742c 83 Pfam PF10751 Protein of unknown function (DUF2535) 2 83 2.6E-39 T 12-10-2018 IPR019687 Protein of unknown function DUF2535 BEN31_17740 8102d852f962ae67827c1efaa4b5e674 176 SUPERFAMILY SSF52833 10 161 3.79E-12 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_17740 8102d852f962ae67827c1efaa4b5e674 176 Pfam PF00578 AhpC/TSA family 47 157 5.8E-7 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_17740 8102d852f962ae67827c1efaa4b5e674 176 Gene3D G3DSA:3.40.30.10 28 175 5.4E-13 T 12-10-2018 BEN31_10680 f153c6bfd3336969f5e69415497ea789 1131 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1003 1086 5.4E-15 T 12-10-2018 BEN31_10680 f153c6bfd3336969f5e69415497ea789 1131 Pfam PF13555 P-loop containing region of AAA domain 13 62 5.1E-7 T 12-10-2018 BEN31_10680 f153c6bfd3336969f5e69415497ea789 1131 SUPERFAMILY SSF52540 28 1114 1.62E-25 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10680 f153c6bfd3336969f5e69415497ea789 1131 Gene3D G3DSA:3.40.50.300 875 1127 5.2E-28 T 12-10-2018 BEN31_10680 f153c6bfd3336969f5e69415497ea789 1131 Gene3D G3DSA:3.40.50.300 2 287 8.2E-41 T 12-10-2018 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 SUPERFAMILY SSF53706 75 643 6.67E-127 T 12-10-2018 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 19 758 4.3E-266 T 12-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 Gene3D G3DSA:3.40.50.740 128 619 2.1E-105 T 12-10-2018 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 PIRSF PIRSF000144 83 761 3.6E-112 T 12-10-2018 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 SUPERFAMILY SSF50692 641 759 6.78E-13 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 Gene3D G3DSA:2.40.40.20 643 760 7.4E-7 T 12-10-2018 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 Gene3D G3DSA:3.40.228.10 199 420 2.1E-105 T 12-10-2018 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 Pfam PF00384 Molybdopterin oxidoreductase 123 576 2.1E-43 T 12-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_17680 995348ed66bbd7dc5f834a8b60ae9193 782 Pfam PF01568 Molydopterin dinucleotide binding domain 656 752 1.1E-10 T 12-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 BEN31_17765 11fd97df04dad62ce7f74a06007c221d 246 SUPERFAMILY SSF52540 7 241 3.1E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17765 11fd97df04dad62ce7f74a06007c221d 246 Pfam PF00005 ABC transporter 23 171 1.1E-36 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_17765 11fd97df04dad62ce7f74a06007c221d 246 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_17765 11fd97df04dad62ce7f74a06007c221d 246 Gene3D G3DSA:3.40.50.300 5 246 2.7E-77 T 12-10-2018 BEN31_17765 11fd97df04dad62ce7f74a06007c221d 246 SMART SM00382 32 219 1.5E-14 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_17765 11fd97df04dad62ce7f74a06007c221d 246 PIRSF PIRSF039085 4 246 1.9E-116 T 12-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 SUPERFAMILY SSF143800 1 65 5.89E-26 T 12-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 Gene3D G3DSA:2.30.170.50 1 66 7.7E-33 T 12-10-2018 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 7.3E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 1.4E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 1.4E-22 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 28.765 T 12-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_17515 502a7ded979a1d8ab670adde0a2d3c89 66 Pfam PF01197 Ribosomal protein L31 1 64 5.3E-32 T 12-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_04505 b62b4282443262a649928da72539f717 189 Gene3D G3DSA:3.40.140.10 2 149 1.3E-47 T 12-10-2018 BEN31_04505 b62b4282443262a649928da72539f717 189 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 151 2.3E-86 T 12-10-2018 IPR013404 Competence operon E, ComEB BEN31_04505 b62b4282443262a649928da72539f717 189 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 2.6E-28 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN31_04505 b62b4282443262a649928da72539f717 189 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 106 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN31_04505 b62b4282443262a649928da72539f717 189 PIRSF PIRSF006019 1 151 5.2E-61 T 12-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 BEN31_04505 b62b4282443262a649928da72539f717 189 SUPERFAMILY SSF53927 8 140 5.46E-40 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_06075 8a6fc9550797af6aa70813b12401ddd5 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.5E-54 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN31_06075 8a6fc9550797af6aa70813b12401ddd5 127 PIRSF PIRSF006246 1 126 3.2E-55 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN31_06075 8a6fc9550797af6aa70813b12401ddd5 127 Gene3D G3DSA:2.40.40.20 1 125 4.5E-55 T 12-10-2018 BEN31_06075 8a6fc9550797af6aa70813b12401ddd5 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 7.9E-60 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN31_06075 8a6fc9550797af6aa70813b12401ddd5 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 73.751 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN31_06075 8a6fc9550797af6aa70813b12401ddd5 127 SUPERFAMILY SSF50692 1 121 4.1E-50 T 12-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily BEN31_06075 8a6fc9550797af6aa70813b12401ddd5 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 98 7.0E-41 T 12-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 BEN31_09570 7f5a336767b5674021e57d62eeb98f25 263 Pfam PF03741 Integral membrane protein TerC family 15 203 6.4E-52 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BEN31_09570 7f5a336767b5674021e57d62eeb98f25 263 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 244 3.1E-93 T 12-10-2018 IPR022493 Integral membrane YkoY BEN31_08875 321dfd2b4cf2ae31fb08032c0de0aa1a 206 SUPERFAMILY SSF81452 21 203 2.49E-53 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08875 321dfd2b4cf2ae31fb08032c0de0aa1a 206 Pfam PF00510 Cytochrome c oxidase subunit III 27 203 5.9E-18 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_08875 321dfd2b4cf2ae31fb08032c0de0aa1a 206 Gene3D G3DSA:1.20.120.80 20 205 2.0E-49 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_10265 ac13479b7393c608dce3732bbdd5a2ea 686 Gene3D G3DSA:1.10.287.830 265 311 2.5E-20 T 12-10-2018 BEN31_10265 ac13479b7393c608dce3732bbdd5a2ea 686 Gene3D G3DSA:1.20.140.70 108 263 2.7E-53 T 12-10-2018 BEN31_10265 ac13479b7393c608dce3732bbdd5a2ea 686 Gene3D G3DSA:1.10.1370.20 312 685 4.5E-145 T 12-10-2018 BEN31_10265 ac13479b7393c608dce3732bbdd5a2ea 686 Pfam PF01432 Peptidase family M3 289 668 7.3E-84 T 12-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 BEN31_10265 ac13479b7393c608dce3732bbdd5a2ea 686 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 91 680 7.9E-223 T 12-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 BEN31_10265 ac13479b7393c608dce3732bbdd5a2ea 686 SUPERFAMILY SSF55486 85 664 5.18E-141 T 12-10-2018 BEN31_10265 ac13479b7393c608dce3732bbdd5a2ea 686 Pfam PF08439 Oligopeptidase F 198 267 3.1E-23 T 12-10-2018 IPR013647 Oligopeptidase F, N-terminal domain BEN31_11165 729e2cd83fa09e84f7f0ea6114b52276 96 ProDom PD065873 YHDK TRANSCRIPTION ANTI-SIGMA-M REPRESSOR TRANSMEMBRANE MEMBRANE PROBABLE REGULATION FACTOR 1 96 3.0E-40 T 12-10-2018 IPR020496 Probable anti-sigma M factor YhdK BEN31_11165 729e2cd83fa09e84f7f0ea6114b52276 96 Pfam PF17453 Sigma-M inhibitor protein 1 96 6.4E-57 T 12-10-2018 IPR020496 Probable anti-sigma M factor YhdK BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 Pfam PF06605 Prophage endopeptidase tail 219 556 8.3E-57 T 12-10-2018 IPR010572 Prophage tail endopeptidase BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 Gene3D G3DSA:4.10.80.30 57 83 2.4E-45 T 12-10-2018 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 PRINTS PR01002 Flagellar protein FlgJ signature 41 62 9.0E-9 T 12-10-2018 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 PRINTS PR01002 Flagellar protein FlgJ signature 126 144 9.0E-9 T 12-10-2018 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 PRINTS PR01002 Flagellar protein FlgJ signature 106 125 9.0E-9 T 12-10-2018 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 PRINTS PR01002 Flagellar protein FlgJ signature 84 105 9.0E-9 T 12-10-2018 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 Gene3D G3DSA:3.55.50.40 281 393 1.0E-11 T 12-10-2018 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 13 144 3.6E-20 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 Gene3D G3DSA:1.10.530.10 6 149 2.4E-45 T 12-10-2018 BEN31_00915 e1a16c5d7b53457ef72eb7a79b013e66 576 SMART SM00047 2 149 3.0E-56 T 12-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 BEN31_14410 4036388fce234dae6f3c883c312682d5 152 SUPERFAMILY SSF55804 1 144 2.35E-29 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_14410 4036388fce234dae6f3c883c312682d5 152 Gene3D G3DSA:3.40.930.10 1 148 1.1E-35 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_14410 4036388fce234dae6f3c883c312682d5 152 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 1 129 5.6E-32 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BEN31_14410 4036388fce234dae6f3c883c312682d5 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 1 144 8.7E-32 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_16160 82dc84dc732781437cc5504e4794d12c 193 Pfam PF15600 Immunity protein 64 6 183 1.6E-15 T 12-10-2018 IPR028951 Immunity protein 64 BEN31_00875 b4ffd064961dcc86e970eb97ffa37f0b 121 Gene3D G3DSA:2.40.10.270 2 118 2.3E-14 T 12-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily BEN31_00875 b4ffd064961dcc86e970eb97ffa37f0b 121 Pfam PF05521 Phage head-tail joining protein 8 114 9.7E-17 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BEN31_00875 b4ffd064961dcc86e970eb97ffa37f0b 121 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 115 5.4E-7 T 12-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor BEN31_12125 ea614c0acb15ca30c1a096b88f26254b 45 Pfam PF11121 Protein of unknown function (DUF2639) 2 39 8.7E-21 T 12-10-2018 IPR022580 Protein of unknown function DUF2639 BEN31_12125 ea614c0acb15ca30c1a096b88f26254b 45 ProDom PD049467 YFLJ 1 42 7.0E-14 T 12-10-2018 IPR022580 Protein of unknown function DUF2639 BEN31_04910 5038a8cdf05548c70502909fbd9ff300 80 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 6.6E-37 T 12-10-2018 IPR020254 Protein of unknown function DUF2626 BEN31_04910 5038a8cdf05548c70502909fbd9ff300 80 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 79 4.0E-36 T 12-10-2018 IPR020254 Protein of unknown function DUF2626 BEN31_10475 5834a9a4c8fb5065ead87698e31212b8 270 Gene3D G3DSA:3.30.1240.10 87 192 4.0E-63 T 12-10-2018 BEN31_10475 5834a9a4c8fb5065ead87698e31212b8 270 Gene3D G3DSA:3.40.50.1000 7 261 4.0E-63 T 12-10-2018 IPR023214 HAD superfamily BEN31_10475 5834a9a4c8fb5065ead87698e31212b8 270 SUPERFAMILY SSF56784 4 268 1.17E-66 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_10475 5834a9a4c8fb5065ead87698e31212b8 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 264 1.0E-66 T 12-10-2018 BEN31_10475 5834a9a4c8fb5065ead87698e31212b8 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 237 3.9E-27 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_10475 5834a9a4c8fb5065ead87698e31212b8 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 264 7.0E-60 T 12-10-2018 IPR000150 Cof family GO:0016787 BEN31_17000 6177406efee93df4faa70c5a9ff56617 223 Pfam PF13712 Glycosyltransferase like family 8 222 1.8E-82 T 12-10-2018 BEN31_17000 6177406efee93df4faa70c5a9ff56617 223 Gene3D G3DSA:3.90.550.10 7 223 9.2E-39 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17000 6177406efee93df4faa70c5a9ff56617 223 SUPERFAMILY SSF53448 9 204 5.06E-6 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_16815 8ece36cf6e8c69d07cb334df102d29dd 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 9.4E-107 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BEN31_16815 8ece36cf6e8c69d07cb334df102d29dd 338 PIRSF PIRSF000267 1 338 2.8E-116 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BEN31_16815 8ece36cf6e8c69d07cb334df102d29dd 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 225 1.7E-90 T 12-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 BEN31_10720 536127c4c372ed5b9cfe76fdaaa34147 381 Pfam PF05145 Transition state regulatory protein AbrB 33 366 4.0E-88 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 BEN31_10720 536127c4c372ed5b9cfe76fdaaa34147 381 PIRSF PIRSF038991 1 374 1.6E-89 T 12-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 BEN31_10720 536127c4c372ed5b9cfe76fdaaa34147 381 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 205 366 1.3E-34 T 12-10-2018 IPR017516 AbrB duplication BEN31_10720 536127c4c372ed5b9cfe76fdaaa34147 381 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 173 3.2E-35 T 12-10-2018 IPR017516 AbrB duplication BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.4E-90 T 12-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 Gene3D G3DSA:3.40.50.450 3 279 7.5E-124 T 12-10-2018 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 Gene3D G3DSA:3.40.50.460 142 251 7.5E-124 T 12-10-2018 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 SUPERFAMILY SSF53784 1 314 1.83E-122 T 12-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 PIRSF PIRSF000532 1 319 3.1E-126 T 12-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 49.778 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 12-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 Pfam PF00365 Phosphofructokinase 3 275 6.4E-116 T 12-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 BEN31_03220 97c43d3f5e47cd75444c8f5bc22ce65c 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 5.1E-144 T 12-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 BEN31_10185 dddc6bccf6a66152797a34db1beaccdb 337 Pfam PF00899 ThiF family 5 239 7.6E-55 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BEN31_10185 dddc6bccf6a66152797a34db1beaccdb 337 SUPERFAMILY SSF69572 3 325 1.09E-78 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BEN31_10185 dddc6bccf6a66152797a34db1beaccdb 337 Gene3D G3DSA:3.40.50.720 2 247 7.5E-71 T 12-10-2018 BEN31_15585 32abdca81996732eb39ebcb172dfe75b 63 Pfam PF10764 Inhibitor of sigma-G Gin 10 54 2.1E-18 T 12-10-2018 IPR019700 Anti-sigma-G factor Gin BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 SUPERFAMILY SSF51445 2 464 2.35E-134 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 Gene3D G3DSA:3.20.20.80 3 467 6.1E-123 T 12-10-2018 BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 367 375 8.4E-11 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 8.4E-11 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 8.4E-11 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 295 309 8.4E-11 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 412 429 8.4E-11 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16715 26b961b9beccec14e58e2b72f5686029 477 Pfam PF00232 Glycosyl hydrolase family 1 5 466 4.2E-102 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_10625 8d2de411f0f07ab259b04deac080a70c 301 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 300 7.7E-68 T 12-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 BEN31_10625 8d2de411f0f07ab259b04deac080a70c 301 SUPERFAMILY SSF56529 85 300 2.75E-72 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN31_10625 8d2de411f0f07ab259b04deac080a70c 301 Gene3D G3DSA:3.90.850.10 87 301 1.2E-81 T 12-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 BEN31_17560 a6b123f319afc829cc222aa62b537207 147 Gene3D G3DSA:3.40.630.30 4 144 1.3E-9 T 12-10-2018 BEN31_17560 a6b123f319afc829cc222aa62b537207 147 SUPERFAMILY SSF55729 3 126 1.42E-8 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_08720 ae72265032dfb82e19866b483d499904 366 Pfam PF01098 Cell cycle protein 12 365 3.0E-130 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08720 ae72265032dfb82e19866b483d499904 366 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 4.6E-185 T 12-10-2018 IPR013438 Sporulation stage V, protein E BEN31_08720 ae72265032dfb82e19866b483d499904 366 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 9 363 2.1E-132 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08720 ae72265032dfb82e19866b483d499904 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_18305 0e4b022d45bcb2996d9e6e997894a643 144 Gene3D G3DSA:2.30.290.10 1 143 2.6E-52 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily BEN31_18305 0e4b022d45bcb2996d9e6e997894a643 144 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 25.6 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 BEN31_18305 0e4b022d45bcb2996d9e6e997894a643 144 SUPERFAMILY SSF141457 1 138 1.31E-48 T 12-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily BEN31_18305 0e4b022d45bcb2996d9e6e997894a643 144 Pfam PF02623 FliW protein 19 137 4.9E-39 T 12-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 BEN31_03090 cd82f3b2f72b350ecd5b3d479cfd10f7 378 SUPERFAMILY SSF55874 249 366 3.42E-10 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03090 cd82f3b2f72b350ecd5b3d479cfd10f7 378 Pfam PF07730 Histidine kinase 178 240 4.3E-21 T 12-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 BEN31_03090 cd82f3b2f72b350ecd5b3d479cfd10f7 378 Gene3D G3DSA:3.30.565.10 242 369 1.8E-30 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_03090 cd82f3b2f72b350ecd5b3d479cfd10f7 378 SUPERFAMILY SSF103473 20 158 7.32E-6 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_10360 aeb530dd56fbbc0dc9410abdde4530bc 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 3.9E-22 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_10360 aeb530dd56fbbc0dc9410abdde4530bc 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 2.6E-27 T 12-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 BEN31_10360 aeb530dd56fbbc0dc9410abdde4530bc 326 SMART SM00382 33 241 9.5E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_10360 aeb530dd56fbbc0dc9410abdde4530bc 326 Pfam PF00005 ABC transporter 25 183 1.2E-28 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_10360 aeb530dd56fbbc0dc9410abdde4530bc 326 SUPERFAMILY SSF52540 4 254 5.08E-70 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_10360 aeb530dd56fbbc0dc9410abdde4530bc 326 Gene3D G3DSA:3.40.50.300 1 326 1.1E-102 T 12-10-2018 BEN31_10360 aeb530dd56fbbc0dc9410abdde4530bc 326 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_07810 5c7566321ff767c85bbdb78b902e1052 193 PIRSF PIRSF000847 1 193 2.9E-54 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BEN31_07810 5c7566321ff767c85bbdb78b902e1052 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN31_07810 5c7566321ff767c85bbdb78b902e1052 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 82 5.6E-18 T 12-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 BEN31_07810 5c7566321ff767c85bbdb78b902e1052 193 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 191 7.5E-70 T 12-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 BEN31_07810 5c7566321ff767c85bbdb78b902e1052 193 Gene3D G3DSA:1.20.120.1760 4 183 3.2E-10 T 12-10-2018 BEN31_11975 2dc7c3dac5c6d294b6338dc77069c15e 65 Gene3D G3DSA:1.20.225.10 5 65 2.5E-5 T 12-10-2018 IPR009086 Bacteriocin AS-48 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 Gene3D G3DSA:2.30.24.10 1 66 5.9E-20 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 Pfam PF00874 PRD domain 183 274 2.0E-18 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 Pfam PF00874 PRD domain 77 163 7.6E-22 T 12-10-2018 IPR011608 PRD domain GO:0006355 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 SUPERFAMILY SSF50151 2 53 1.26E-14 T 12-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 SUPERFAMILY SSF63520 173 276 6.8E-27 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 SUPERFAMILY SSF63520 60 167 2.88E-29 T 12-10-2018 IPR036634 PRD domain superfamily GO:0006355 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 Gene3D G3DSA:1.10.1790.10 171 278 5.1E-30 T 12-10-2018 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 SMART SM01061 2 60 2.3E-22 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 Gene3D G3DSA:1.10.1790.10 67 167 3.4E-33 T 12-10-2018 BEN31_16305 4f8bb5b84fcfb0ee5bfaa2c5c4683c7f 282 Pfam PF03123 CAT RNA binding domain 3 54 2.2E-18 T 12-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 BEN31_16955 e6c039ca8b772148208c3505c562ea46 393 SUPERFAMILY SSF88697 1 70 7.66E-19 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_16955 e6c039ca8b772148208c3505c562ea46 393 Gene3D G3DSA:3.30.750.80 70 177 4.3E-36 T 12-10-2018 BEN31_16955 e6c039ca8b772148208c3505c562ea46 393 SMART SM00359 2 86 6.1E-7 T 12-10-2018 IPR002478 PUA domain GO:0003723 BEN31_16955 e6c039ca8b772148208c3505c562ea46 393 Gene3D G3DSA:2.30.130.10 1 69 4.4E-22 T 12-10-2018 IPR036974 PUA domain superfamily GO:0003723 BEN31_16955 e6c039ca8b772148208c3505c562ea46 393 Gene3D G3DSA:3.40.50.150 179 393 4.6E-60 T 12-10-2018 BEN31_16955 e6c039ca8b772148208c3505c562ea46 393 SUPERFAMILY SSF53335 77 390 4.39E-67 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_16955 e6c039ca8b772148208c3505c562ea46 393 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 101 345 8.3E-34 T 12-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 Pfam PF00232 Glycosyl hydrolase family 1 6 484 9.7E-132 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 SUPERFAMILY SSF51445 5 484 1.29E-158 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_16300 28d3dd1281f0e256a300d34759177371 488 Gene3D G3DSA:3.20.20.80 3 487 7.4E-148 T 12-10-2018 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 11 25 - T 12-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site BEN31_16300 28d3dd1281f0e256a300d34759177371 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 449 461 1.0E-13 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 441 1.0E-13 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 403 414 1.0E-13 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 317 331 1.0E-13 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 382 390 1.0E-13 T 12-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 BEN31_16300 28d3dd1281f0e256a300d34759177371 488 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 382 390 - T 12-10-2018 IPR018120 Glycoside hydrolase family 1, active site BEN31_10465 14dd5bee70156917e6bd54cd8f0af22e 102 SUPERFAMILY SSF117916 1 100 2.35E-33 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN31_10465 14dd5bee70156917e6bd54cd8f0af22e 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 3.7E-23 T 12-10-2018 IPR002744 MIP18 family-like BEN31_10465 14dd5bee70156917e6bd54cd8f0af22e 102 Gene3D G3DSA:3.30.300.130 1 102 5.2E-38 T 12-10-2018 IPR034904 Fe-S cluster assembly domain superfamily BEN31_01510 e1a10538ef97908c547474f7e1c31737 91 Gene3D G3DSA:3.50.4.20 1 91 8.3E-44 T 12-10-2018 IPR038141 YutD-like superfamily BEN31_01510 e1a10538ef97908c547474f7e1c31737 91 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 6.4E-39 T 12-10-2018 IPR009370 Protein of unknown function DUF1027 BEN31_01510 e1a10538ef97908c547474f7e1c31737 91 PIRSF PIRSF012565 1 91 3.7E-50 T 12-10-2018 IPR009370 Protein of unknown function DUF1027 BEN31_09120 58ce52ff2f150adc752cf645fb9370b8 233 Pfam PF00005 ABC transporter 21 169 1.3E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_09120 58ce52ff2f150adc752cf645fb9370b8 233 Gene3D G3DSA:3.40.50.300 1 231 2.2E-66 T 12-10-2018 BEN31_09120 58ce52ff2f150adc752cf645fb9370b8 233 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_09120 58ce52ff2f150adc752cf645fb9370b8 233 SUPERFAMILY SSF52540 1 222 9.98E-74 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_09120 58ce52ff2f150adc752cf645fb9370b8 233 SMART SM00382 30 217 3.9E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_09745 41639c2ea1155dbcdbd6d510c7a2b3b9 173 Pfam PF03061 Thioesterase superfamily 28 100 1.5E-14 T 12-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 BEN31_09745 41639c2ea1155dbcdbd6d510c7a2b3b9 173 Gene3D G3DSA:3.10.129.10 1 168 8.7E-57 T 12-10-2018 BEN31_09745 41639c2ea1155dbcdbd6d510c7a2b3b9 173 SUPERFAMILY SSF54637 6 157 2.11E-45 T 12-10-2018 IPR029069 HotDog domain superfamily BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 Pfam PF02872 5'-nucleotidase, C-terminal domain 774 912 2.5E-30 T 12-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 SUPERFAMILY SSF55816 773 958 1.02E-40 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 SMART SM00318 251 392 4.2E-37 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 Pfam PF00149 Calcineurin-like phosphoesterase 464 699 1.3E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 SUPERFAMILY SSF50199 249 396 4.32E-28 T 12-10-2018 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 ProSitePatterns PS00786 5'-nucleotidase signature 2. 545 556 - T 12-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 Gene3D G3DSA:3.60.21.10 459 772 1.1E-81 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 Gene3D G3DSA:2.40.50.90 247 395 1.5E-34 T 12-10-2018 IPR035437 SNase-like, OB-fold superfamily BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 PRINTS PR01607 Apyrase family signature 461 479 8.5E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 PRINTS PR01607 Apyrase family signature 708 728 8.5E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 PRINTS PR01607 Apyrase family signature 825 848 8.5E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 PRINTS PR01607 Apyrase family signature 682 705 8.5E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 PRINTS PR01607 Apyrase family signature 654 671 8.5E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 PRINTS PR01607 Apyrase family signature 893 912 8.5E-24 T 12-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 Gene3D G3DSA:3.90.780.10 774 957 7.5E-40 T 12-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 SUPERFAMILY SSF56300 457 771 8.99E-75 T 12-10-2018 BEN31_11295 3a097d53d0f79142f588a42233a447ca 967 Pfam PF00565 Staphylococcal nuclease homologue 277 392 2.3E-23 T 12-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 233 248 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 129 146 - T 12-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 Gene3D G3DSA:3.20.20.100 1 279 4.8E-123 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 PIRSF PIRSF000097 1 124 4.8E-41 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 PIRSF PIRSF000097 119 275 4.4E-50 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 Pfam PF00248 Aldo/keto reductase family 28 265 3.1E-49 T 12-10-2018 IPR023210 NADP-dependent oxidoreductase domain BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 PRINTS PR00069 Aldo-keto reductase signature 39 63 9.8E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 PRINTS PR00069 Aldo-keto reductase signature 99 117 9.8E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 PRINTS PR00069 Aldo-keto reductase signature 129 146 9.8E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 PRINTS PR00069 Aldo-keto reductase signature 163 192 9.8E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 PRINTS PR00069 Aldo-keto reductase signature 200 224 9.8E-51 T 12-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 BEN31_02705 f96693bc564ca1c80b5d4cc26c8134b4 279 SUPERFAMILY SSF51430 3 272 6.02E-93 T 12-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily BEN31_07000 a1439939915a2e7003f6b3735fee5b3f 71 Pfam PF00364 Biotin-requiring enzyme 9 69 1.6E-18 T 12-10-2018 IPR000089 Biotin/lipoyl attachment BEN31_07000 a1439939915a2e7003f6b3735fee5b3f 71 Gene3D G3DSA:2.40.50.100 3 71 2.1E-25 T 12-10-2018 BEN31_07000 a1439939915a2e7003f6b3735fee5b3f 71 SUPERFAMILY SSF51230 3 69 3.27E-20 T 12-10-2018 IPR011053 Single hybrid motif BEN31_07005 bdcb43ce652b9993f58bb2ef4fe293c4 302 SUPERFAMILY SSF51569 2 291 6.23E-69 T 12-10-2018 BEN31_07005 bdcb43ce652b9993f58bb2ef4fe293c4 302 Gene3D G3DSA:3.20.20.70 1 302 9.5E-116 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_07005 bdcb43ce652b9993f58bb2ef4fe293c4 302 Pfam PF00682 HMGL-like 7 279 5.9E-45 T 12-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 BEN31_09895 c7ba66dd985d52df0c785035a79bf7d0 205 Gene3D G3DSA:1.20.58.220 9 205 2.6E-55 T 12-10-2018 IPR038078 PhoU-like domain superfamily BEN31_09895 c7ba66dd985d52df0c785035a79bf7d0 205 Pfam PF01865 Protein of unknown function DUF47 8 202 2.1E-24 T 12-10-2018 IPR018445 Putative phosphate transport regulator BEN31_09895 c7ba66dd985d52df0c785035a79bf7d0 205 SUPERFAMILY SSF109755 14 196 3.27E-6 T 12-10-2018 BEN31_16385 bfdf138862c814892def373fb890cd86 402 Gene3D G3DSA:3.20.20.80 21 402 3.4E-152 T 12-10-2018 BEN31_16385 bfdf138862c814892def373fb890cd86 402 Pfam PF07745 Glycosyl hydrolase family 53 41 397 1.2E-125 T 12-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 BEN31_16385 bfdf138862c814892def373fb890cd86 402 SUPERFAMILY SSF51445 38 401 2.14E-102 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_01865 c6437539d580e4368ee52ce47dcb22c1 136 Pfam PF04134 Protein of unknown function, DUF393 10 119 1.3E-33 T 12-10-2018 IPR007263 Protein of unknown function DUF393 BEN31_15205 65d42b37bd2c402eace5a95dd20fbd83 154 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 151 2.9E-58 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 BEN31_15205 65d42b37bd2c402eace5a95dd20fbd83 154 Gene3D G3DSA:1.10.1200.150 74 154 9.0E-28 T 12-10-2018 BEN31_15205 65d42b37bd2c402eace5a95dd20fbd83 154 PIRSF PIRSF010607 1 154 5.6E-67 T 12-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 BEN31_15205 65d42b37bd2c402eace5a95dd20fbd83 154 Gene3D G3DSA:1.10.10.1240 3 73 5.4E-36 T 12-10-2018 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 Gene3D G3DSA:2.60.40.710 458 616 6.3E-55 T 12-10-2018 IPR036966 Carbohydrate-binding module 3 superfamily GO:0005975|GO:0030248 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 SUPERFAMILY SSF48208 3 451 1.63E-164 T 12-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 ProSitePatterns PS00592 Glycosyl hydrolases family 9 active sites signature 1. 362 378 - T 12-10-2018 IPR018221 Glycoside hydrolase family 9, His active site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 Pfam PF00759 Glycosyl hydrolase family 9 6 434 1.9E-146 T 12-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 ProSitePatterns PS00698 Glycosyl hydrolases family 9 active sites signature 2. 412 430 - T 12-10-2018 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 Pfam PF00942 Cellulose binding domain 465 547 4.8E-13 T 12-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 SUPERFAMILY SSF49384 461 614 2.35E-50 T 12-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 SMART SM01067 463 548 3.0E-30 T 12-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 BEN31_08005 b5bccaa3b31d9de5eea28092d01525e9 616 Gene3D G3DSA:1.50.10.10 1 457 8.5E-193 T 12-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 BEN31_14895 38d728d2046546f0eaf1672ee6085a56 280 SMART SM00382 33 218 4.3E-15 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14895 38d728d2046546f0eaf1672ee6085a56 280 Pfam PF00005 ABC transporter 24 170 1.9E-34 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_14895 38d728d2046546f0eaf1672ee6085a56 280 Gene3D G3DSA:3.40.50.300 2 279 2.6E-80 T 12-10-2018 BEN31_14895 38d728d2046546f0eaf1672ee6085a56 280 SUPERFAMILY SSF52540 4 230 2.18E-65 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_14895 38d728d2046546f0eaf1672ee6085a56 280 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_14895 38d728d2046546f0eaf1672ee6085a56 280 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 274 2.2E-119 T 12-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 BEN31_06610 a9f1924c70d63f55fe2a29d6dc3b6166 319 Pfam PF01758 Sodium Bile acid symporter family 42 220 1.4E-49 T 12-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 BEN31_06610 a9f1924c70d63f55fe2a29d6dc3b6166 319 TIGRFAM TIGR00841 bass: bile acid transporter 6 306 8.6E-99 T 12-10-2018 IPR004710 Bile acid:sodium symporter BEN31_06610 a9f1924c70d63f55fe2a29d6dc3b6166 319 Gene3D G3DSA:1.20.1530.20 1 307 9.2E-115 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BEN31_08205 1bbe1fd1df9e5460b31bb92d8940e6ca 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 4 105 1.6E-31 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN31_08205 1bbe1fd1df9e5460b31bb92d8940e6ca 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 20 105 5.7E-28 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN31_08205 1bbe1fd1df9e5460b31bb92d8940e6ca 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 1.5E-16 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN31_08205 1bbe1fd1df9e5460b31bb92d8940e6ca 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 1.5E-16 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN31_08205 1bbe1fd1df9e5460b31bb92d8940e6ca 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 35 51 1.5E-16 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN31_08205 1bbe1fd1df9e5460b31bb92d8940e6ca 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 105 18.152 T 12-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 BEN31_10165 6eac8fc67cd5cec501a210c2e395e408 147 Pfam PF10612 Spore coat protein Z 3 139 1.6E-32 T 12-10-2018 IPR019593 Spore coat protein Z/Y BEN31_03935 6ad3f921d84aef6bb66f846ca6225700 125 Pfam PF12670 Protein of unknown function (DUF3792) 9 119 1.7E-22 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane BEN31_03935 6ad3f921d84aef6bb66f846ca6225700 125 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 10 122 1.4E-29 T 12-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 ProSitePatterns PS01218 TatC family signature. 151 170 - T 12-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 223 5.1E-69 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 218 1.5E-57 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 151 179 4.4E-40 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 4.4E-40 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 4.4E-40 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 4.4E-40 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN31_12900 b2dd2781891a5eed8cc4df5c25c620fb 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 245 16.658 T 12-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 BEN31_14305 ecc28561626d4a8981ac8ff63f1ddd98 121 SUPERFAMILY SSF54593 1 120 5.49E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_14305 ecc28561626d4a8981ac8ff63f1ddd98 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 111 1.2E-5 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_14305 ecc28561626d4a8981ac8ff63f1ddd98 121 Gene3D G3DSA:3.10.180.10 1 121 1.6E-21 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_05665 6049138c6db1fdc8960866d53c40506c 252 Pfam PF02616 Segregation and condensation protein ScpA 21 244 2.3E-67 T 12-10-2018 IPR003768 Segregation and condensation protein A BEN31_05665 6049138c6db1fdc8960866d53c40506c 252 Hamap MF_01805 Segregation and condensation protein A [scpA]. 4 247 27.414 T 12-10-2018 IPR003768 Segregation and condensation protein A BEN31_05650 5147ac42ebf9375efe830f373a20cc04 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 150 7.0E-61 T 12-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05650 5147ac42ebf9375efe830f373a20cc04 154 Gene3D G3DSA:3.40.50.960 1 154 9.7E-67 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05650 5147ac42ebf9375efe830f373a20cc04 154 SUPERFAMILY SSF52121 3 153 3.66E-64 T 12-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05650 5147ac42ebf9375efe830f373a20cc04 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.684 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05650 5147ac42ebf9375efe830f373a20cc04 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 5.2E-60 T 12-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_16535 7ed0ab7f06c82f0c3710e9425e1dbc7d 793 Pfam PF05547 Immune inhibitor A peptidase M6 139 787 1.6E-261 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 BEN31_16535 7ed0ab7f06c82f0c3710e9425e1dbc7d 793 PIRSF PIRSF007519 1 793 9.6E-296 T 12-10-2018 IPR012300 Peptidase M6, InhA BEN31_16535 7ed0ab7f06c82f0c3710e9425e1dbc7d 793 SUPERFAMILY SSF55486 251 422 2.78E-17 T 12-10-2018 BEN31_16535 7ed0ab7f06c82f0c3710e9425e1dbc7d 793 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 155 477 1.7E-81 T 12-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 SUPERFAMILY SSF100879 248 346 1.47E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Hamap MF_01113 DNA polymerase IV [dinB]. 8 360 37.201 T 12-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Pfam PF11798 IMS family HHH motif 175 204 6.4E-8 T 12-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Gene3D G3DSA:3.30.70.270 11 171 2.1E-55 T 12-10-2018 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Pfam PF00817 impB/mucB/samB family 14 161 8.5E-49 T 12-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Gene3D G3DSA:1.10.150.20 175 242 2.6E-15 T 12-10-2018 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Gene3D G3DSA:2.30.40.20 28 81 2.1E-55 T 12-10-2018 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Gene3D G3DSA:3.30.1490.100 250 357 1.8E-24 T 12-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 353 4.2E-18 T 12-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 BEN31_05320 aa6e889522576a061f54a5820caf0eeb 418 SUPERFAMILY SSF56672 7 241 1.25E-79 T 12-10-2018 BEN31_12905 8e748542e3546c599d7d0290f34a5dcf 59 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 7.0E-19 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BEN31_12905 8e748542e3546c599d7d0290f34a5dcf 59 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 58 17.961 T 12-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 BEN31_12905 8e748542e3546c599d7d0290f34a5dcf 59 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.9E-6 T 12-10-2018 BEN31_12905 8e748542e3546c599d7d0290f34a5dcf 59 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.9E-6 T 12-10-2018 BEN31_12905 8e748542e3546c599d7d0290f34a5dcf 59 Pfam PF02416 mttA/Hcf106 family 4 55 5.7E-23 T 12-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 41 569 3.6E-201 T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 Gene3D G3DSA:3.60.20.40 397 575 2.0E-71 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 283 302 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 415 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 476 493 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 421 439 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 452 467 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 138 156 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 156 175 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 269 1.6E-75 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 SUPERFAMILY SSF56235 34 576 5.4E-178 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 Pfam PF01019 Gamma-glutamyltranspeptidase 56 571 6.7E-170 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 Gene3D G3DSA:1.10.246.130 269 396 9.6E-51 T 12-10-2018 BEN31_09885 a021b9feaa36abe134b7e78344c51128 583 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 397 421 - T 12-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 BEN31_07210 06689103f96c202224fb1aeac2769d63 445 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 34 417 1.6E-119 T 12-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 BEN31_07210 06689103f96c202224fb1aeac2769d63 445 Pfam PF02386 Cation transport protein 37 431 3.9E-62 T 12-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 BEN31_13810 7798491fae9f2ba7231dbabdc37abf6e 497 SUPERFAMILY SSF103473 16 491 1.48E-31 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_13810 7798491fae9f2ba7231dbabdc37abf6e 497 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 493 3.2E-136 T 12-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 BEN31_13810 7798491fae9f2ba7231dbabdc37abf6e 497 Gene3D G3DSA:1.20.1250.20 1 497 3.4E-146 T 12-10-2018 BEN31_13810 7798491fae9f2ba7231dbabdc37abf6e 497 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN31_13810 7798491fae9f2ba7231dbabdc37abf6e 497 Pfam PF00854 POT family 97 465 2.5E-79 T 12-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 BEN31_13810 7798491fae9f2ba7231dbabdc37abf6e 497 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 12-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 BEN31_13225 5454eaf11bef44bed60b3faca9a7e98a 185 Pfam PF02525 Flavodoxin-like fold 2 178 2.3E-36 T 12-10-2018 IPR003680 Flavodoxin-like fold BEN31_13225 5454eaf11bef44bed60b3faca9a7e98a 185 SUPERFAMILY SSF52218 2 182 1.92E-36 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_13225 5454eaf11bef44bed60b3faca9a7e98a 185 Gene3D G3DSA:3.40.50.360 1 183 5.8E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_07990 1e210062f8083e1929c187b9c06243c4 376 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 335 2.0E-16 T 12-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 BEN31_07990 1e210062f8083e1929c187b9c06243c4 376 SUPERFAMILY SSF51445 31 353 5.54E-81 T 12-10-2018 IPR017853 Glycoside hydrolase superfamily BEN31_07990 1e210062f8083e1929c187b9c06243c4 376 Gene3D G3DSA:3.20.20.80 29 375 4.7E-126 T 12-10-2018 BEN31_16935 71d525900fdfca433bbf71017d447d52 254 SUPERFAMILY SSF53850 1 253 1.6E-76 T 12-10-2018 BEN31_16935 71d525900fdfca433bbf71017d447d52 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 253 3.3E-69 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_16935 71d525900fdfca433bbf71017d447d52 254 Gene3D G3DSA:3.40.190.10 37 251 9.9E-79 T 12-10-2018 BEN31_16935 71d525900fdfca433bbf71017d447d52 254 SMART SM00079 34 254 4.9E-7 T 12-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 BEN31_16935 71d525900fdfca433bbf71017d447d52 254 Gene3D G3DSA:3.40.190.10 118 213 9.9E-79 T 12-10-2018 BEN31_16935 71d525900fdfca433bbf71017d447d52 254 SMART SM00062 34 254 3.4E-73 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_17750 4024dbfff0cc48a2a04b5ea1348c9aef 298 Gene3D G3DSA:2.70.70.10 74 231 6.0E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_17750 4024dbfff0cc48a2a04b5ea1348c9aef 298 Pfam PF01551 Peptidase family M23 118 215 4.3E-24 T 12-10-2018 IPR016047 Peptidase M23 BEN31_17750 4024dbfff0cc48a2a04b5ea1348c9aef 298 SUPERFAMILY SSF51261 59 219 1.73E-27 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_13660 5477c9611a314f000ec2ae134dfbd272 88 SMART SM00894 32 87 3.2E-10 T 12-10-2018 IPR008613 Excalibur calcium-binding domain BEN31_13660 5477c9611a314f000ec2ae134dfbd272 88 Pfam PF05901 Excalibur calcium-binding domain 33 87 6.4E-16 T 12-10-2018 IPR008613 Excalibur calcium-binding domain BEN31_16180 287020a587ea81cf9c06a192eaac68e0 244 Gene3D G3DSA:3.40.50.300 1 242 5.9E-65 T 12-10-2018 BEN31_16180 287020a587ea81cf9c06a192eaac68e0 244 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_16180 287020a587ea81cf9c06a192eaac68e0 244 Pfam PF00005 ABC transporter 20 162 1.4E-29 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_16180 287020a587ea81cf9c06a192eaac68e0 244 SUPERFAMILY SSF52540 3 225 9.57E-61 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_16180 287020a587ea81cf9c06a192eaac68e0 244 SMART SM00382 28 210 4.4E-8 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_09870 acd15a421008a3d416bf6a6e30a23aa2 92 SUPERFAMILY SSF52794 3 90 4.5E-19 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_09870 acd15a421008a3d416bf6a6e30a23aa2 92 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 76 2.3E-14 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_09870 acd15a421008a3d416bf6a6e30a23aa2 92 Gene3D G3DSA:3.40.50.2300 2 92 1.3E-28 T 12-10-2018 BEN31_10790 7f64c3ca3be8e93ae30be52865ff9dbb 192 Pfam PF06338 ComK protein 10 158 1.2E-62 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 BEN31_10790 7f64c3ca3be8e93ae30be52865ff9dbb 192 PIRSF PIRSF011560 5 191 2.9E-71 T 12-10-2018 IPR010461 Competence protein ComK GO:0030420 BEN31_15575 4ef0a721f7252463b621128b6a089ce3 352 Pfam PF05816 Toxic anion resistance protein (TelA) 37 350 2.4E-51 T 12-10-2018 IPR008863 Toxic anion resistance BEN31_18390 a3a0e9e1e84798a28e73b966887fd56e 421 SUPERFAMILY SSF51261 246 420 2.98E-45 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_18390 a3a0e9e1e84798a28e73b966887fd56e 421 Gene3D G3DSA:1.20.5.340 29 131 9.9E-7 T 12-10-2018 BEN31_18390 a3a0e9e1e84798a28e73b966887fd56e 421 SUPERFAMILY SSF57997 36 119 1.67E-7 T 12-10-2018 BEN31_18390 a3a0e9e1e84798a28e73b966887fd56e 421 Pfam PF01551 Peptidase family M23 313 416 1.4E-29 T 12-10-2018 IPR016047 Peptidase M23 BEN31_18390 a3a0e9e1e84798a28e73b966887fd56e 421 Gene3D G3DSA:2.70.70.10 241 421 1.2E-39 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_17665 110c492d5e39a7ea31b55ce0d3c06110 341 Pfam PF08486 Stage II sporulation protein 66 169 1.0E-25 T 12-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal BEN31_17665 110c492d5e39a7ea31b55ce0d3c06110 341 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 69 328 4.2E-72 T 12-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 BEN31_17665 110c492d5e39a7ea31b55ce0d3c06110 341 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 5 329 1.7E-133 T 12-10-2018 IPR014225 Sporulation stage II, protein D firmicutes BEN31_16810 a52d22724a8a1124cb4d272d8cddb2dd 471 PIRSF PIRSF006446 1 463 8.4E-188 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BEN31_16810 a52d22724a8a1124cb4d272d8cddb2dd 471 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 442 1.2E-171 T 12-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 BEN31_17860 fbd88057eb8cda0f8dc297788f6e5d10 535 Pfam PF04434 SWIM zinc finger 76 98 2.7E-5 T 12-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 BEN31_06220 a49fed876c7e6dc8d533266f9dbfc1c3 366 PIRSF PIRSF000451 1 364 1.9E-125 T 12-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 BEN31_06220 a49fed876c7e6dc8d533266f9dbfc1c3 366 SUPERFAMILY SSF53901 219 361 8.32E-38 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_06220 a49fed876c7e6dc8d533266f9dbfc1c3 366 SUPERFAMILY SSF53901 1 207 4.94E-47 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_06220 a49fed876c7e6dc8d533266f9dbfc1c3 366 Gene3D G3DSA:3.40.47.10 1 211 2.8E-63 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_06220 a49fed876c7e6dc8d533266f9dbfc1c3 366 Gene3D G3DSA:3.40.47.10 219 361 4.7E-39 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_06220 a49fed876c7e6dc8d533266f9dbfc1c3 366 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 228 360 1.8E-19 T 12-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal BEN31_06220 a49fed876c7e6dc8d533266f9dbfc1c3 366 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 2 204 7.5E-24 T 12-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal BEN31_05440 362ab5d608c93559c9a187f49caa9d05 149 Pfam PF10787 Uncharacterised protein from bacillus cereus group 2 145 4.5E-67 T 12-10-2018 IPR019723 Uncharacterised protein, YfmQ BEN31_07410 5ee73ba410f283354ad56ee14cebc919 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 214 3.0E-65 T 12-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 BEN31_18220 1def173902b35ff72ecbedce68cc479d 251 Gene3D G3DSA:3.90.550.10 1 248 1.7E-61 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_18220 1def173902b35ff72ecbedce68cc479d 251 SUPERFAMILY SSF53448 5 225 1.13E-56 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_18220 1def173902b35ff72ecbedce68cc479d 251 Pfam PF00535 Glycosyl transferase family 2 8 150 5.0E-37 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_09270 43c972b062086c43980e022335d13b52 285 SUPERFAMILY SSF56300 58 282 3.94E-34 T 12-10-2018 BEN31_09270 43c972b062086c43980e022335d13b52 285 Gene3D G3DSA:3.60.21.10 56 243 1.1E-22 T 12-10-2018 IPR029052 Metallo-dependent phosphatase-like BEN31_09270 43c972b062086c43980e022335d13b52 285 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 24 0.0016 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BEN31_09270 43c972b062086c43980e022335d13b52 285 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 3 26 2.2E-5 T 12-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal BEN31_09270 43c972b062086c43980e022335d13b52 285 Pfam PF00149 Calcineurin-like phosphoesterase 58 222 1.8E-11 T 12-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 BEN31_05990 31db7ec4e0f445883410c008be9574b3 179 Hamap MF_00760 UPF0302 protein . 2 178 32.729 T 12-10-2018 IPR011188 Uncharacterised protein family UPF0302 BEN31_05990 31db7ec4e0f445883410c008be9574b3 179 Gene3D G3DSA:1.20.1440.290 1 123 7.5E-55 T 12-10-2018 IPR038091 UPF0302, N-terminal domain superfamily BEN31_05990 31db7ec4e0f445883410c008be9574b3 179 Pfam PF08858 IDEAL domain 139 175 3.9E-15 T 12-10-2018 IPR014957 IDEAL domain BEN31_05990 31db7ec4e0f445883410c008be9574b3 179 Pfam PF08864 UPF0302 domain 9 112 9.0E-47 T 12-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal BEN31_05990 31db7ec4e0f445883410c008be9574b3 179 Gene3D G3DSA:4.10.810.10 124 179 1.5E-18 T 12-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 BEN31_05990 31db7ec4e0f445883410c008be9574b3 179 PIRSF PIRSF007165 1 179 1.0E-79 T 12-10-2018 IPR011188 Uncharacterised protein family UPF0302 BEN31_05990 31db7ec4e0f445883410c008be9574b3 179 SMART SM00914 139 175 4.8E-14 T 12-10-2018 IPR014957 IDEAL domain BEN31_07425 eb0255517ea69488fe0e0615c09a4e5f 148 Gene3D G3DSA:3.30.310.250 1 148 5.8E-52 T 12-10-2018 IPR038449 SirA superfamily BEN31_07425 eb0255517ea69488fe0e0615c09a4e5f 148 Pfam PF10747 Sporulation inhibitor of replication protein SirA 3 143 2.3E-47 T 12-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA BEN31_14775 0043800130b96dac102cc65bc25c0204 415 Pfam PF07075 Protein of unknown function (DUF1343) 58 415 1.3E-154 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 BEN31_14775 0043800130b96dac102cc65bc25c0204 415 Gene3D G3DSA:3.90.1150.140 253 400 6.0E-159 T 12-10-2018 BEN31_14775 0043800130b96dac102cc65bc25c0204 415 PIRSF PIRSF016719 1 415 1.4E-182 T 12-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 BEN31_14775 0043800130b96dac102cc65bc25c0204 415 Gene3D G3DSA:3.40.50.12170 40 415 6.0E-159 T 12-10-2018 BEN31_18315 2dc6a1a4539a82f991a5be3ff62c4333 113 Pfam PF03646 FlaG protein 18 111 4.3E-26 T 12-10-2018 IPR005186 FlaG protein BEN31_18315 2dc6a1a4539a82f991a5be3ff62c4333 113 SUPERFAMILY SSF160214 15 112 3.4E-29 T 12-10-2018 IPR035924 FlaG-like superfamily BEN31_18315 2dc6a1a4539a82f991a5be3ff62c4333 113 Gene3D G3DSA:3.30.160.170 9 109 1.5E-31 T 12-10-2018 IPR035924 FlaG-like superfamily BEN31_10700 cb3b2df030dd80925bab8b8be7cc55bc 148 Pfam PF02915 Rubrerythrin 23 79 1.6E-8 T 12-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 BEN31_10700 cb3b2df030dd80925bab8b8be7cc55bc 148 SUPERFAMILY SSF47240 12 146 1.91E-30 T 12-10-2018 IPR009078 Ferritin-like superfamily BEN31_10700 cb3b2df030dd80925bab8b8be7cc55bc 148 Gene3D G3DSA:1.20.5.420 22 70 5.9E-14 T 12-10-2018 BEN31_10700 cb3b2df030dd80925bab8b8be7cc55bc 148 Gene3D G3DSA:1.20.5.420 95 142 9.5E-11 T 12-10-2018 BEN31_05155 c9ee6bf854ddf3279eb533b868ea33d0 296 Gene3D G3DSA:1.10.600.10 1 296 4.1E-105 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_05155 c9ee6bf854ddf3279eb533b868ea33d0 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN31_05155 c9ee6bf854ddf3279eb533b868ea33d0 296 Pfam PF00348 Polyprenyl synthetase 32 273 9.1E-60 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BEN31_05155 c9ee6bf854ddf3279eb533b868ea33d0 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 12-10-2018 IPR033749 Polyprenyl synthetase, conserved site BEN31_05155 c9ee6bf854ddf3279eb533b868ea33d0 296 SUPERFAMILY SSF48576 7 275 6.88E-85 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 SUPERFAMILY SSF55021 2 77 8.77E-19 T 12-10-2018 BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 SUPERFAMILY SSF55021 80 160 1.5E-25 T 12-10-2018 BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 158 1.5E-64 T 12-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 Pfam PF10369 Small subunit of acetolactate synthase 85 157 5.6E-28 T 12-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 Pfam PF01842 ACT domain 4 68 7.2E-16 T 12-10-2018 IPR002912 ACT domain BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 1.0E-31 T 12-10-2018 BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 Gene3D G3DSA:3.30.70.260 1 80 4.9E-29 T 12-10-2018 BEN31_03640 2e4aedcb97c7e6ea723cec8a88c6b2b1 172 Gene3D G3DSA:3.30.70.1150 84 165 4.0E-29 T 12-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal BEN31_11260 b038f6e86ba8ff2a613da14a355a549b 305 Pfam PF03547 Membrane transport protein 7 139 1.6E-8 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BEN31_11260 b038f6e86ba8ff2a613da14a355a549b 305 Pfam PF03547 Membrane transport protein 151 295 3.6E-18 T 12-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 BEN31_11260 b038f6e86ba8ff2a613da14a355a549b 305 Gene3D G3DSA:1.20.1530.20 161 304 4.9E-9 T 12-10-2018 IPR038770 Sodium/solute symporter superfamily BEN31_11825 c1f127ff3c751a7be3b10471ccc9be7d 209 Gene3D G3DSA:3.40.50.1110 2 209 9.6E-64 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BEN31_11825 c1f127ff3c751a7be3b10471ccc9be7d 209 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 191 5.5E-13 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN31_11825 c1f127ff3c751a7be3b10471ccc9be7d 209 SUPERFAMILY SSF52266 2 204 1.02E-50 T 12-10-2018 BEN31_04985 137b58b59a1f36e299258d3bbb0be5a7 190 Pfam PF00717 Peptidase S24-like 46 105 5.3E-10 T 12-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BEN31_04985 137b58b59a1f36e299258d3bbb0be5a7 190 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 9 166 2.5E-46 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 BEN31_04985 137b58b59a1f36e299258d3bbb0be5a7 190 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 106 117 6.9E-7 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 BEN31_04985 137b58b59a1f36e299258d3bbb0be5a7 190 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 47 62 6.9E-7 T 12-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 BEN31_04985 137b58b59a1f36e299258d3bbb0be5a7 190 SUPERFAMILY SSF51306 39 124 1.26E-9 T 12-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BEN31_04985 137b58b59a1f36e299258d3bbb0be5a7 190 Gene3D G3DSA:2.10.109.10 42 100 1.1E-7 T 12-10-2018 BEN31_12390 4f16693e07f0a711f4b269d28f70fb3a 536 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 333 3.1E-15 T 12-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 BEN31_12390 4f16693e07f0a711f4b269d28f70fb3a 536 Gene3D G3DSA:3.40.50.300 1 354 1.6E-30 T 12-10-2018 BEN31_12390 4f16693e07f0a711f4b269d28f70fb3a 536 SUPERFAMILY SSF52540 1 352 1.66E-26 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_02430 5cee3886f133a0c56b1863d7c34eb30a 472 Hamap MF_01935 Isochorismate synthase MenF [menF]. 5 468 31.396 T 12-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BEN31_02430 5cee3886f133a0c56b1863d7c34eb30a 472 Pfam PF00425 chorismate binding enzyme 206 458 7.1E-75 T 12-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal BEN31_02430 5cee3886f133a0c56b1863d7c34eb30a 472 SUPERFAMILY SSF56322 48 467 4.71E-102 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_02430 5cee3886f133a0c56b1863d7c34eb30a 472 Gene3D G3DSA:3.60.120.10 2 469 3.9E-112 T 12-10-2018 IPR005801 ADC synthase GO:0009058 BEN31_02430 5cee3886f133a0c56b1863d7c34eb30a 472 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 117 466 5.5E-113 T 12-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 Gene3D G3DSA:1.10.10.10 1 74 7.5E-30 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 SUPERFAMILY SSF46894 8 72 3.4E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 SMART SM00421 9 66 3.9E-25 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 3.4E-24 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_03545 8cae6c39ae27257092ec8df22b529a9d 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 1.2E-12 T 12-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 BEN31_02605 8b91972a52c6b44c6a420c0bd3fdc147 171 SUPERFAMILY SSF51161 3 168 3.33E-49 T 12-10-2018 IPR011004 Trimeric LpxA-like superfamily BEN31_02605 8b91972a52c6b44c6a420c0bd3fdc147 171 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 6.9E-8 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_02605 8b91972a52c6b44c6a420c0bd3fdc147 171 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 44 2.4E-5 T 12-10-2018 IPR001451 Hexapeptide repeat BEN31_02605 8b91972a52c6b44c6a420c0bd3fdc147 171 Gene3D G3DSA:2.160.10.10 1 171 5.5E-71 T 12-10-2018 BEN31_05195 7201dbf5a35ede2ff702517b264d98d8 366 Gene3D G3DSA:1.25.40.10 3 365 1.0E-84 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_05195 7201dbf5a35ede2ff702517b264d98d8 366 SUPERFAMILY SSF48452 90 286 7.15E-13 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_00700 2d037e8c1713e949a7c0219906c5e26d 248 PIRSF PIRSF017388 1 246 2.8E-100 T 12-10-2018 IPR012354 Esterase/lipase GO:0052689 BEN31_00700 2d037e8c1713e949a7c0219906c5e26d 248 SUPERFAMILY SSF53474 12 245 4.97E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_00700 2d037e8c1713e949a7c0219906c5e26d 248 Pfam PF12146 Serine aminopeptidase, S33 16 229 1.8E-18 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BEN31_00700 2d037e8c1713e949a7c0219906c5e26d 248 Gene3D G3DSA:3.40.50.1820 1 246 1.0E-62 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_04185 aa576d7d2f0019a9b523879cc2de00bd 84 Pfam PF14143 YrhC-like protein 11 82 2.0E-31 T 12-10-2018 IPR025418 YrhC-like protein BEN31_04185 aa576d7d2f0019a9b523879cc2de00bd 84 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 10 83 5.0E-17 T 12-10-2018 IPR025418 YrhC-like protein BEN31_14440 6133b062fdeca3ad0eb45a426ca8baf7 138 Gene3D G3DSA:3.20.170.40 1 138 3.3E-60 T 12-10-2018 IPR038611 Rifampin ADP-ribosyltransferase superfamily BEN31_14440 6133b062fdeca3ad0eb45a426ca8baf7 138 Pfam PF12120 Rifampin ADP-ribosyl transferase 13 110 5.2E-46 T 12-10-2018 IPR021975 Rifampin ADP-ribosyltransferase BEN31_00470 75a38e54c245311b4e0ea776c0c708b3 279 Gene3D G3DSA:3.90.550.10 1 237 1.5E-59 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_00470 75a38e54c245311b4e0ea776c0c708b3 279 SUPERFAMILY SSF53448 4 226 9.14E-57 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_00470 75a38e54c245311b4e0ea776c0c708b3 279 Pfam PF00535 Glycosyl transferase family 2 7 159 3.7E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_11180 378ecdd5bd0db032a7a00b35bddeb441 471 Pfam PF04293 SpoVR like protein 7 408 5.2E-163 T 12-10-2018 IPR007390 Sporulation stage V, protein R BEN31_05950 19d9cb36b6a9f7ab698f4cc96b455c01 250 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 247 6.7E-87 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BEN31_05950 19d9cb36b6a9f7ab698f4cc96b455c01 250 Gene3D G3DSA:3.20.20.70 1 250 1.7E-87 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_05950 19d9cb36b6a9f7ab698f4cc96b455c01 250 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 249 31.932 T 12-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 BEN31_05950 19d9cb36b6a9f7ab698f4cc96b455c01 250 SUPERFAMILY SSF51366 12 249 4.12E-79 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_05950 19d9cb36b6a9f7ab698f4cc96b455c01 250 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 42 60 - T 12-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 BEN31_00525 897e34c9dc48ec7d0d299f85d2e39907 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 17 270 2.3E-115 T 12-10-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 BEN31_00525 897e34c9dc48ec7d0d299f85d2e39907 277 SUPERFAMILY SSF161098 70 259 3.4E-30 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00525 897e34c9dc48ec7d0d299f85d2e39907 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 267 2.2E-29 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_00525 897e34c9dc48ec7d0d299f85d2e39907 277 Gene3D G3DSA:1.10.3720.10 66 271 3.2E-28 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_12540 bb5f27e5a7759a1ca59683f8e3a835a7 230 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 28.179 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 BEN31_12540 bb5f27e5a7759a1ca59683f8e3a835a7 230 Pfam PF01884 PcrB family 2 225 2.2E-88 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 BEN31_12540 bb5f27e5a7759a1ca59683f8e3a835a7 230 Gene3D G3DSA:3.20.20.390 1 230 1.3E-94 T 12-10-2018 IPR038597 GGGP/HepGP synthase superfamily BEN31_12540 bb5f27e5a7759a1ca59683f8e3a835a7 230 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 9 223 7.1E-73 T 12-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 BEN31_12540 bb5f27e5a7759a1ca59683f8e3a835a7 230 SUPERFAMILY SSF51395 6 220 2.75E-51 T 12-10-2018 BEN31_02610 d612f0599f6637cd96392c41b3d6d927 259 Gene3D G3DSA:3.40.50.1820 1 258 2.3E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_02610 d612f0599f6637cd96392c41b3d6d927 259 SUPERFAMILY SSF53474 7 256 2.47E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_02610 d612f0599f6637cd96392c41b3d6d927 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 4.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02610 d612f0599f6637cd96392c41b3d6d927 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 4.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02610 d612f0599f6637cd96392c41b3d6d927 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 198 212 4.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02610 d612f0599f6637cd96392c41b3d6d927 259 Pfam PF12146 Serine aminopeptidase, S33 8 243 7.0E-58 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BEN31_14860 8588c8044e5e506fa2aff9ee21d61b44 248 SUPERFAMILY SSF51556 2 245 2.31E-41 T 12-10-2018 IPR032466 Metal-dependent hydrolase BEN31_14860 8588c8044e5e506fa2aff9ee21d61b44 248 Pfam PF04909 Amidohydrolase 5 246 4.4E-14 T 12-10-2018 IPR006680 Amidohydrolase-related GO:0016787 BEN31_14860 8588c8044e5e506fa2aff9ee21d61b44 248 Gene3D G3DSA:3.20.20.140 1 247 5.4E-42 T 12-10-2018 BEN31_10375 df9527d2926d529c35e34c8e61ebe8f1 312 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 310 71.805 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN31_10375 df9527d2926d529c35e34c8e61ebe8f1 312 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 310 1.2E-141 T 12-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN31_10375 df9527d2926d529c35e34c8e61ebe8f1 312 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 310 5.9E-36 T 12-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN31_10375 df9527d2926d529c35e34c8e61ebe8f1 312 Gene3D G3DSA:3.40.47.10 1 312 6.7E-132 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_10375 df9527d2926d529c35e34c8e61ebe8f1 312 SUPERFAMILY SSF53901 3 310 9.16E-72 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_10375 df9527d2926d529c35e34c8e61ebe8f1 312 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 4.4E-31 T 12-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 BEN31_04485 0a1b10badec466045eb2ed7e9a39d1a5 118 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 7.3E-25 T 12-10-2018 BEN31_04485 0a1b10badec466045eb2ed7e9a39d1a5 118 SUPERFAMILY SSF81301 1 112 4.41E-39 T 12-10-2018 BEN31_04485 0a1b10badec466045eb2ed7e9a39d1a5 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 3.2E-35 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BEN31_04485 0a1b10badec466045eb2ed7e9a39d1a5 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.585 T 12-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS BEN31_04485 0a1b10badec466045eb2ed7e9a39d1a5 118 Gene3D G3DSA:3.30.460.10 1 108 1.4E-37 T 12-10-2018 BEN31_14765 eec95e6559cdd7a99ca7856ff281efb9 451 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 1 451 64.614 T 12-10-2018 IPR022849 Peptidase S12, UPF0214, YfeW-type BEN31_14765 eec95e6559cdd7a99ca7856ff281efb9 451 Pfam PF00144 Beta-lactamase 64 430 6.1E-68 T 12-10-2018 IPR001466 Beta-lactamase-related BEN31_14765 eec95e6559cdd7a99ca7856ff281efb9 451 Gene3D G3DSA:3.40.710.10 44 425 1.0E-87 T 12-10-2018 BEN31_14765 eec95e6559cdd7a99ca7856ff281efb9 451 SUPERFAMILY SSF56601 53 417 3.25E-78 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_04820 e4d4d74364263a139d0f068f0a995ba9 305 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 288 7.3E-83 T 12-10-2018 IPR011862 Phosphate binding protein GO:0042301 BEN31_04820 e4d4d74364263a139d0f068f0a995ba9 305 Gene3D G3DSA:3.40.190.10 51 289 8.5E-89 T 12-10-2018 BEN31_04820 e4d4d74364263a139d0f068f0a995ba9 305 Pfam PF12849 PBP superfamily domain 42 275 8.6E-42 T 12-10-2018 IPR024370 PBP domain BEN31_04820 e4d4d74364263a139d0f068f0a995ba9 305 SUPERFAMILY SSF53850 49 297 2.36E-73 T 12-10-2018 BEN31_04820 e4d4d74364263a139d0f068f0a995ba9 305 Gene3D G3DSA:3.40.190.10 123 245 8.5E-89 T 12-10-2018 BEN31_11600 8cb421f7e139e8ffee31b61121d3150c 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 62 1.4E-9 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BEN31_11600 8cb421f7e139e8ffee31b61121d3150c 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 296 2.5E-33 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_11600 8cb421f7e139e8ffee31b61121d3150c 298 SUPERFAMILY SSF161098 89 281 3.27E-32 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_11600 8cb421f7e139e8ffee31b61121d3150c 298 Gene3D G3DSA:1.10.3720.10 83 296 2.0E-27 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_03805 600a2358cef195d7e715b07f03fee660 263 Gene3D G3DSA:2.70.70.10 133 261 2.9E-14 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_03805 600a2358cef195d7e715b07f03fee660 263 SUPERFAMILY SSF51261 177 258 2.88E-9 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_03805 600a2358cef195d7e715b07f03fee660 263 Pfam PF01551 Peptidase family M23 166 256 3.9E-13 T 12-10-2018 IPR016047 Peptidase M23 BEN31_15035 a6ceef74d27d22b33c30da925912fc82 95 Pfam PF00276 Ribosomal protein L23 6 88 7.4E-32 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BEN31_15035 a6ceef74d27d22b33c30da925912fc82 95 Gene3D G3DSA:3.30.70.330 1 95 3.4E-32 T 12-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily BEN31_15035 a6ceef74d27d22b33c30da925912fc82 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 21.84 T 12-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 BEN31_15035 a6ceef74d27d22b33c30da925912fc82 95 SUPERFAMILY SSF54189 2 91 1.26E-30 T 12-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 BEN31_15035 a6ceef74d27d22b33c30da925912fc82 95 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 12-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 BEN31_15645 47f3d7b80387de34950285fad78d4b54 158 Pfam PF14437 MafB19-like deaminase 4 149 2.1E-41 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BEN31_15645 47f3d7b80387de34950285fad78d4b54 158 Gene3D G3DSA:3.40.140.10 1 158 2.7E-61 T 12-10-2018 BEN31_15645 47f3d7b80387de34950285fad78d4b54 158 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 149 45.594 T 12-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 BEN31_15645 47f3d7b80387de34950285fad78d4b54 158 SUPERFAMILY SSF53927 2 153 1.3E-53 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_15645 47f3d7b80387de34950285fad78d4b54 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN31_10470 45799bbd53140152da9b8df70c0271a0 261 SUPERFAMILY SSF53474 18 257 2.91E-35 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_10470 45799bbd53140152da9b8df70c0271a0 261 Pfam PF00326 Prolyl oligopeptidase family 98 257 9.2E-15 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN31_10470 45799bbd53140152da9b8df70c0271a0 261 Gene3D G3DSA:3.40.50.1820 2 259 9.9E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_05770 e43dc357aa086690a24f4cbc24d968a5 253 Gene3D G3DSA:3.10.350.10 186 253 9.8E-10 T 12-10-2018 IPR036779 LysM domain superfamily BEN31_05770 e43dc357aa086690a24f4cbc24d968a5 253 SMART SM00257 204 250 4.5E-7 T 12-10-2018 IPR018392 LysM domain BEN31_05770 e43dc357aa086690a24f4cbc24d968a5 253 Pfam PF01476 LysM domain 205 250 4.6E-7 T 12-10-2018 IPR018392 LysM domain BEN31_05770 e43dc357aa086690a24f4cbc24d968a5 253 SUPERFAMILY SSF54106 203 250 9.16E-6 T 12-10-2018 BEN31_08070 0e40495a29fec529065c33a6567d4adb 166 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 5 162 26.975 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BEN31_08070 0e40495a29fec529065c33a6567d4adb 166 Gene3D G3DSA:3.30.1330.200 7 166 4.1E-46 T 12-10-2018 IPR038592 CheD-like superfamily BEN31_08070 0e40495a29fec529065c33a6567d4adb 166 SUPERFAMILY SSF64438 8 163 7.14E-45 T 12-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic BEN31_08070 0e40495a29fec529065c33a6567d4adb 166 Pfam PF03975 CheD chemotactic sensory transduction 52 158 2.0E-34 T 12-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 BEN31_03125 c849bc85ed11e99e03ef3c1fa7ddb651 150 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 134 3.7E-58 T 12-10-2018 IPR014229 Sporulation protein YtfJ BEN31_03125 c849bc85ed11e99e03ef3c1fa7ddb651 150 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 125 3.5E-29 T 12-10-2018 IPR014229 Sporulation protein YtfJ BEN31_03125 c849bc85ed11e99e03ef3c1fa7ddb651 150 PIRSF PIRSF021377 1 149 9.1E-63 T 12-10-2018 IPR014229 Sporulation protein YtfJ BEN31_12100 3e0ce1db4efb7a424045c2d8ccdc6dc5 195 Pfam PF14172 Domain of unknown function (DUF4309) 47 190 2.0E-32 T 12-10-2018 IPR025453 Protein of unknown function DUF4309 BEN31_02710 bc70759d1db7682beb7fc8e513f3992a 395 Pfam PF07690 Major Facilitator Superfamily 13 325 8.3E-39 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_02710 bc70759d1db7682beb7fc8e513f3992a 395 Gene3D G3DSA:1.20.1250.20 3 199 2.3E-30 T 12-10-2018 BEN31_02710 bc70759d1db7682beb7fc8e513f3992a 395 Gene3D G3DSA:1.20.1250.20 200 394 4.7E-16 T 12-10-2018 BEN31_02710 bc70759d1db7682beb7fc8e513f3992a 395 SUPERFAMILY SSF103473 3 386 1.44E-58 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14845 edffbd26d250274009995c73b703620d 189 Pfam PF16107 Domain of unknown function (DUF4825) 40 139 4.5E-17 T 12-10-2018 IPR032250 Domain of unknown function DUF4825 BEN31_07855 5d6f4d71f44e53a1051d887de0c9d312 1038 SUPERFAMILY SSF82866 811 1034 2.35E-30 T 12-10-2018 BEN31_07855 5d6f4d71f44e53a1051d887de0c9d312 1038 Gene3D G3DSA:1.20.1640.10 146 343 8.3E-12 T 12-10-2018 BEN31_07855 5d6f4d71f44e53a1051d887de0c9d312 1038 Pfam PF03176 MMPL family 704 1035 2.4E-43 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BEN31_07855 5d6f4d71f44e53a1051d887de0c9d312 1038 Pfam PF03176 MMPL family 42 365 1.4E-56 T 12-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 BEN31_07855 5d6f4d71f44e53a1051d887de0c9d312 1038 SUPERFAMILY SSF82866 136 338 1.01E-31 T 12-10-2018 BEN31_07855 5d6f4d71f44e53a1051d887de0c9d312 1038 Gene3D G3DSA:1.20.1640.10 830 1030 2.9E-6 T 12-10-2018 BEN31_05340 fe41b3404cd2627cdf6b395eeae7def0 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 4.3E-18 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_05340 fe41b3404cd2627cdf6b395eeae7def0 103 Gene3D G3DSA:3.40.50.2300 2 103 1.4E-31 T 12-10-2018 BEN31_05340 fe41b3404cd2627cdf6b395eeae7def0 103 SUPERFAMILY SSF52794 1 102 1.54E-32 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_02495 76bbcaec9af0e7af5611a0b6c2a64127 188 Gene3D G3DSA:3.40.1050.10 2 183 2.7E-45 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BEN31_02495 76bbcaec9af0e7af5611a0b6c2a64127 188 Pfam PF00484 Carbonic anhydrase 33 178 1.1E-17 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN31_02495 76bbcaec9af0e7af5611a0b6c2a64127 188 SUPERFAMILY SSF53056 1 181 2.22E-41 T 12-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 BEN31_02495 76bbcaec9af0e7af5611a0b6c2a64127 188 SMART SM00947 26 182 3.1E-38 T 12-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 SUPERFAMILY SSF53187 4 372 7.43E-64 T 12-10-2018 BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 Gene3D G3DSA:3.40.630.10 14 354 4.4E-88 T 12-10-2018 BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 Gene3D G3DSA:3.30.70.360 168 280 4.4E-88 T 12-10-2018 BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 358 5.7E-100 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 PIRSF PIRSF005962 1 374 4.1E-105 T 12-10-2018 IPR017439 Amidohydrolase GO:0016787 BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 SUPERFAMILY SSF55031 173 274 1.64E-22 T 12-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 Pfam PF01546 Peptidase family M20/M25/M40 69 367 4.6E-26 T 12-10-2018 IPR002933 Peptidase M20 GO:0016787 BEN31_14125 4015fb9d811d4df16a05d3086d431a25 375 Pfam PF07687 Peptidase dimerisation domain 176 265 7.3E-12 T 12-10-2018 IPR011650 Peptidase M20, dimerisation domain BEN31_00385 4046edcefe33f51a1fc4bd3442e294b8 389 SUPERFAMILY SSF53756 3 382 1.71E-76 T 12-10-2018 BEN31_00385 4046edcefe33f51a1fc4bd3442e294b8 389 Gene3D G3DSA:3.40.50.2000 204 367 3.1E-102 T 12-10-2018 BEN31_00385 4046edcefe33f51a1fc4bd3442e294b8 389 Gene3D G3DSA:3.40.50.2000 5 378 3.1E-102 T 12-10-2018 BEN31_00385 4046edcefe33f51a1fc4bd3442e294b8 389 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 194 358 1.3E-18 T 12-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 BEN31_00385 4046edcefe33f51a1fc4bd3442e294b8 389 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 383 2.9E-92 T 12-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 BEN31_10760 7c22b8281b109e3df706a05baa2f7c2d 316 Gene3D G3DSA:1.10.3470.10 1 314 1.0E-62 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_10760 7c22b8281b109e3df706a05baa2f7c2d 316 SUPERFAMILY SSF81345 3 312 5.36E-67 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_10760 7c22b8281b109e3df706a05baa2f7c2d 316 Pfam PF01032 FecCD transport family 10 311 2.1E-65 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_15125 91ecd9f17ab50c83cf86125313c40399 58 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 56 12.86 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_15125 91ecd9f17ab50c83cf86125313c40399 58 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 3 57 1.7E-21 T 12-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 BEN31_15125 91ecd9f17ab50c83cf86125313c40399 58 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 57 1.6E-19 T 12-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 BEN31_15125 91ecd9f17ab50c83cf86125313c40399 58 Gene3D G3DSA:1.20.5.1030 1 58 3.4E-19 T 12-10-2018 IPR038379 SecE superfamily BEN31_03960 bef001b08c174587930fd271b178cccd 162 Pfam PF02080 TrkA-C domain 90 158 1.8E-17 T 12-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 BEN31_03960 bef001b08c174587930fd271b178cccd 162 SUPERFAMILY SSF116726 84 157 7.32E-17 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_03960 bef001b08c174587930fd271b178cccd 162 PIRSF PIRSF005028 1 162 1.4E-56 T 12-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT BEN31_03960 bef001b08c174587930fd271b178cccd 162 Gene3D G3DSA:3.30.70.1450 85 160 3.9E-19 T 12-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 BEN31_01490 f498a5da703137c9361c58a7c625c183 254 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 142 231 1.5E-29 T 12-10-2018 IPR014197 Sporulation protein YunB BEN31_01490 f498a5da703137c9361c58a7c625c183 254 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 13 235 1.6E-62 T 12-10-2018 IPR014197 Sporulation protein YunB BEN31_01490 f498a5da703137c9361c58a7c625c183 254 PIRSF PIRSF021383 1 248 5.5E-88 T 12-10-2018 IPR014197 Sporulation protein YunB BEN31_02510 dcf378242315857aec3e918c861518bc 144 Pfam PF13115 YtkA-like 31 111 5.5E-18 T 12-10-2018 IPR032693 YtkA-like domain BEN31_11765 89fcff85d905567e532e6988929272c8 51 ProDom PD053407 YFHD 16 51 2.0E-4 T 12-10-2018 BEN31_11765 89fcff85d905567e532e6988929272c8 51 Pfam PF14151 YfhD-like protein 5 51 2.4E-15 T 12-10-2018 IPR025435 YfhD-like protein BEN31_04690 878ff0c561f6281028b10db1a33396de 166 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 16 161 28.923 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 BEN31_04690 878ff0c561f6281028b10db1a33396de 166 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 31 159 5.8E-39 T 12-10-2018 IPR003791 Protein of unknown function UPF0178 BEN31_02695 fe25b3504695e2fab12af10205917053 292 Gene3D G3DSA:1.10.3720.10 3 283 7.1E-73 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_02695 fe25b3504695e2fab12af10205917053 292 SUPERFAMILY SSF161098 8 292 3.53E-60 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_02695 fe25b3504695e2fab12af10205917053 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 284 3.4E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_17655 c48723235bb8832864e6cf10200748a2 244 Pfam PF08680 TATA-box binding 46 244 1.7E-56 T 12-10-2018 IPR014794 TATA-box binding BEN31_17655 c48723235bb8832864e6cf10200748a2 244 Gene3D G3DSA:3.30.360.40 169 244 1.6E-30 T 12-10-2018 BEN31_17655 c48723235bb8832864e6cf10200748a2 244 Gene3D G3DSA:3.30.2030.10 29 168 5.4E-39 T 12-10-2018 BEN31_17655 c48723235bb8832864e6cf10200748a2 244 SUPERFAMILY SSF143842 31 242 7.98E-67 T 12-10-2018 IPR036209 YwmB-like superfamily BEN31_11115 ef7a29875f82f76b708cd76e3e1bba36 238 SUPERFAMILY SSF51695 2 234 1.23E-76 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BEN31_11115 ef7a29875f82f76b708cd76e3e1bba36 238 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 231 2.4E-49 T 12-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 BEN31_11115 ef7a29875f82f76b708cd76e3e1bba36 238 Gene3D G3DSA:3.20.20.190 1 237 3.1E-82 T 12-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 BEN31_01450 d1a0f574cc78b8f69f445abfbd359ef9 292 SUPERFAMILY SSF54060 72 284 6.59E-60 T 12-10-2018 BEN31_01450 d1a0f574cc78b8f69f445abfbd359ef9 292 Pfam PF04231 Endonuclease I 77 284 8.1E-43 T 12-10-2018 IPR007346 Endonuclease I GO:0004518 BEN31_16375 1cd38f73670187c53711b6d81f236c14 442 Pfam PF03600 Citrate transporter 14 389 7.8E-44 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BEN31_16375 1cd38f73670187c53711b6d81f236c14 442 TIGRFAM TIGR00784 citMHS: citrate transporter 1 442 4.9E-102 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 SUPERFAMILY SSF52540 307 534 3.17E-63 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 SUPERFAMILY SSF55781 67 186 5.56E-6 T 12-10-2018 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 Gene3D G3DSA:1.10.8.60 477 538 4.9E-12 T 12-10-2018 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 Pfam PF02954 Bacterial regulatory protein, Fis family 572 612 1.3E-6 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 Pfam PF01590 GAF domain 99 182 2.2E-6 T 12-10-2018 IPR003018 GAF domain GO:0005515 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 SUPERFAMILY SSF46689 565 614 4.48E-8 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 Pfam PF00158 Sigma-54 interaction domain 307 472 1.7E-66 T 12-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 595 615 1.3E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 578 595 1.3E-5 T 12-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 514 523 - T 12-10-2018 IPR025944 Sigma-54 interaction domain, conserved site BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 SMART SM00382 325 473 4.5E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 Gene3D G3DSA:1.10.10.60 552 615 5.7E-10 T 12-10-2018 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 Gene3D G3DSA:3.40.50.300 294 476 8.9E-62 T 12-10-2018 BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 Gene3D G3DSA:3.30.450.40 19 204 2.3E-58 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_13270 91f98beeea121d541f47d75d189bf4e6 615 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 392 407 - T 12-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 BEN31_06255 88f175f7aeb70e708148929339e274c2 229 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 223 2.9E-74 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BEN31_06255 88f175f7aeb70e708148929339e274c2 229 Hamap MF_02088 Probable queuosine precursor transporter. 26 227 17.338 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BEN31_06255 88f175f7aeb70e708148929339e274c2 229 Pfam PF02592 Putative vitamin uptake transporter 57 217 1.2E-49 T 12-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 BEN31_10385 a48e5fbb5a767d7d1462c3cd0c6222d0 65 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 3 57 2.0E-17 T 12-10-2018 IPR024558 ComZ BEN31_10385 a48e5fbb5a767d7d1462c3cd0c6222d0 65 Pfam PF10815 ComZ 4 58 5.0E-32 T 12-10-2018 IPR024558 ComZ BEN31_07080 53a70fd274bc38a2bc83ee932d7ec520 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 143 1.2E-30 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_07080 53a70fd274bc38a2bc83ee932d7ec520 152 Gene3D G3DSA:3.40.930.10 1 145 2.8E-35 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_07080 53a70fd274bc38a2bc83ee932d7ec520 152 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 129 1.2E-31 T 12-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 BEN31_07080 53a70fd274bc38a2bc83ee932d7ec520 152 SUPERFAMILY SSF55804 8 143 2.62E-30 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_04350 6c5990af6d6978c8d2641bf5f8ed0337 166 Pfam PF01944 Stage II sporulation protein M 11 161 1.2E-18 T 12-10-2018 IPR002798 Stage II sporulation protein M-like BEN31_10910 d1d2ae158ad3f173a36f80f6c8ebb185 235 Pfam PF12787 EcsC protein family 16 231 2.5E-65 T 12-10-2018 IPR024787 EcsC protein BEN31_10910 d1d2ae158ad3f173a36f80f6c8ebb185 235 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 10 231 3.0E-68 T 12-10-2018 BEN31_11850 63c88436c126afe4ab34a1e2a38cca40 104 Gene3D G3DSA:1.10.3730.20 1 104 5.2E-21 T 12-10-2018 BEN31_11850 63c88436c126afe4ab34a1e2a38cca40 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.4E-21 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BEN31_11850 63c88436c126afe4ab34a1e2a38cca40 104 SUPERFAMILY SSF103481 4 102 9.15E-15 T 12-10-2018 BEN31_03500 55b2d05b579cc4b435710120817633de 147 Gene3D G3DSA:3.30.1380.20 1 146 1.1E-57 T 12-10-2018 BEN31_03500 55b2d05b579cc4b435710120817633de 147 Pfam PF10702 Protein of unknown function (DUF2507) 19 140 2.1E-47 T 12-10-2018 IPR019642 Protein of unknown function DUF2507 BEN31_03500 55b2d05b579cc4b435710120817633de 147 SUPERFAMILY SSF111126 15 126 5.75E-22 T 12-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily BEN31_03130 64c69878617a1f49fd1281eaa9b25399 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 12-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 BEN31_03130 64c69878617a1f49fd1281eaa9b25399 166 Gene3D G3DSA:3.40.30.10 2 164 1.9E-47 T 12-10-2018 BEN31_03130 64c69878617a1f49fd1281eaa9b25399 166 Pfam PF08534 Redoxin 19 159 2.4E-20 T 12-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 BEN31_03130 64c69878617a1f49fd1281eaa9b25399 166 SUPERFAMILY SSF52833 3 160 3.98E-43 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_03130 64c69878617a1f49fd1281eaa9b25399 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 37.544 T 12-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 BEN31_17470 974478fb9b441372422d854b8fc27f8c 180 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 93 2.9E-34 T 12-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 BEN31_17470 974478fb9b441372422d854b8fc27f8c 180 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 180 15.139 T 12-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 BEN31_17470 974478fb9b441372422d854b8fc27f8c 180 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 5.2E-14 T 12-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 BEN31_17470 974478fb9b441372422d854b8fc27f8c 180 Gene3D G3DSA:1.10.10.1250 2 82 7.1E-32 T 12-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily BEN31_07910 d3d39f9d7e993077caec91353701a39e 300 Gene3D G3DSA:3.40.50.720 7 285 4.8E-104 T 12-10-2018 BEN31_07910 d3d39f9d7e993077caec91353701a39e 300 SUPERFAMILY SSF51735 141 248 4.16E-17 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_07910 d3d39f9d7e993077caec91353701a39e 300 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 123 2.8E-29 T 12-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal BEN31_07910 d3d39f9d7e993077caec91353701a39e 300 Gene3D G3DSA:3.40.50.720 126 272 4.8E-104 T 12-10-2018 BEN31_07910 d3d39f9d7e993077caec91353701a39e 300 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 152 294 1.4E-8 T 12-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain BEN31_07910 d3d39f9d7e993077caec91353701a39e 300 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 5 289 6.2E-132 T 12-10-2018 IPR014215 Dipicolinic acid synthetase subunit A BEN31_08275 ee0c7283c38cee68670ff1369ac86f4e 254 Pfam PF01351 Ribonuclease HII 73 248 9.8E-36 T 12-10-2018 IPR024567 Ribonuclease HII/HIII domain BEN31_08275 ee0c7283c38cee68670ff1369ac86f4e 254 Hamap MF_00052_B Ribonuclease HII [rnhB]. 71 249 36.547 T 12-10-2018 IPR022898 Ribonuclease HII GO:0004523 BEN31_08275 ee0c7283c38cee68670ff1369ac86f4e 254 Gene3D G3DSA:3.30.420.10 47 254 7.2E-78 T 12-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 BEN31_08275 ee0c7283c38cee68670ff1369ac86f4e 254 SUPERFAMILY SSF53098 61 253 1.32E-68 T 12-10-2018 IPR012337 Ribonuclease H-like superfamily BEN31_09060 a63e76dcabf1983160743b78270f6b6e 278 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 6 117 5.8E-23 T 12-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like BEN31_09060 a63e76dcabf1983160743b78270f6b6e 278 SUPERFAMILY SSF110857 129 255 5.76E-19 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BEN31_09060 a63e76dcabf1983160743b78270f6b6e 278 Gene3D G3DSA:3.10.490.10 123 278 5.3E-62 T 12-10-2018 BEN31_09060 a63e76dcabf1983160743b78270f6b6e 278 SUPERFAMILY SSF110857 4 123 1.7E-23 T 12-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily BEN31_09060 a63e76dcabf1983160743b78270f6b6e 278 Gene3D G3DSA:3.10.490.10 3 120 1.6E-30 T 12-10-2018 BEN31_09060 a63e76dcabf1983160743b78270f6b6e 278 Pfam PF13772 AIG2-like family 188 266 1.7E-8 T 12-10-2018 BEN31_12825 16912075269b2bcf6c6ee030a249d9ed 349 SUPERFAMILY SSF69304 57 340 5.89E-20 T 12-10-2018 BEN31_12825 16912075269b2bcf6c6ee030a249d9ed 349 Gene3D G3DSA:2.120.10.30 61 208 2.3E-5 T 12-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like BEN31_12825 16912075269b2bcf6c6ee030a249d9ed 349 Gene3D G3DSA:2.130.10.10 209 303 2.2E-7 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_04925 db1385756cc8c20e4ec080b95a33ea80 290 SUPERFAMILY SSF52091 169 275 3.34E-17 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_04925 db1385756cc8c20e4ec080b95a33ea80 290 Pfam PF14361 RsbT co-antagonist protein rsbRD N-terminal domain 12 109 2.7E-5 T 12-10-2018 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain BEN31_04925 db1385756cc8c20e4ec080b95a33ea80 290 Gene3D G3DSA:3.30.750.24 164 279 2.4E-35 T 12-10-2018 IPR036513 STAS domain superfamily BEN31_04925 db1385756cc8c20e4ec080b95a33ea80 290 Pfam PF01740 STAS domain 170 268 1.2E-13 T 12-10-2018 IPR002645 STAS domain BEN31_06390 aef9264adce0882dc14bf045642171c7 188 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 3 184 1.2E-60 T 12-10-2018 IPR018672 Protein of unknown function DUF2140 BEN31_05595 f3a5aed7d9396d5d44ad4d17171a443a 202 Pfam PF14097 Stage V sporulation protein AE1 6 185 5.1E-82 T 12-10-2018 IPR025914 Stage V sporulation protein AE BEN31_03230 60d793cd13fc969dd3d0c99cf9a85814 129 Pfam PF04186 FxsA cytoplasmic membrane protein 7 115 1.9E-34 T 12-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 BEN31_00155 d82019a86d418bf81a0974cf413994bd 184 Gene3D G3DSA:3.40.50.300 1 183 2.3E-31 T 12-10-2018 BEN31_00155 d82019a86d418bf81a0974cf413994bd 184 SUPERFAMILY SSF52540 2 180 5.62E-8 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17970 bce4b884a588b0344b83c3e4f3fce577 300 Pfam PF08282 haloacid dehalogenase-like hydrolase 12 285 1.6E-60 T 12-10-2018 BEN31_17970 bce4b884a588b0344b83c3e4f3fce577 300 Gene3D G3DSA:3.30.1240.10 87 212 4.2E-37 T 12-10-2018 BEN31_17970 bce4b884a588b0344b83c3e4f3fce577 300 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 11 258 2.9E-32 T 12-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 BEN31_17970 bce4b884a588b0344b83c3e4f3fce577 300 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 11 285 3.0E-53 T 12-10-2018 IPR000150 Cof family GO:0016787 BEN31_17970 bce4b884a588b0344b83c3e4f3fce577 300 SUPERFAMILY SSF56784 7 287 1.13E-64 T 12-10-2018 IPR036412 HAD-like superfamily BEN31_12150 bd978e2dc744eb921287a3be820acb4c 161 Pfam PF05870 Phenolic acid decarboxylase (PAD) 1 158 3.3E-82 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 BEN31_12150 bd978e2dc744eb921287a3be820acb4c 161 Gene3D G3DSA:2.40.128.20 1 161 2.9E-81 T 12-10-2018 IPR012674 Calycin BEN31_12150 bd978e2dc744eb921287a3be820acb4c 161 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 1 160 4.0E-91 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 BEN31_12150 bd978e2dc744eb921287a3be820acb4c 161 SUPERFAMILY SSF50814 2 160 1.17E-72 T 12-10-2018 IPR012674 Calycin BEN31_12150 bd978e2dc744eb921287a3be820acb4c 161 PIRSF PIRSF011561 1 161 2.9E-92 T 12-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 BEN31_09605 2939d45489e7d2833b4c625b7cd3808a 122 SUPERFAMILY SSF51182 2 118 4.95E-26 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_09605 2939d45489e7d2833b4c625b7cd3808a 122 Gene3D G3DSA:2.60.120.10 1 104 3.1E-33 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_09605 2939d45489e7d2833b4c625b7cd3808a 122 Pfam PF07883 Cupin domain 36 95 1.4E-12 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BEN31_15760 b36f9767f97f1abbf13e2d054d6a2857 71 Pfam PF13275 S4 domain 5 69 1.8E-28 T 12-10-2018 BEN31_15760 b36f9767f97f1abbf13e2d054d6a2857 71 SUPERFAMILY SSF55174 5 68 3.68E-18 T 12-10-2018 BEN31_15760 b36f9767f97f1abbf13e2d054d6a2857 71 Gene3D G3DSA:3.10.290.10 1 70 2.0E-24 T 12-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 BEN31_15760 b36f9767f97f1abbf13e2d054d6a2857 71 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 5 63 1.4E-30 T 12-10-2018 IPR014330 RNA-binding S4-related,YaaA BEN31_03030 5ba95b39878219204a2a6ef815d1e56b 204 Pfam PF01810 LysE type translocator 15 201 7.9E-28 T 12-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 BEN31_11410 30ba22493427002051da9c0c5bd8b613 301 Gene3D G3DSA:1.10.10.1150 6 93 1.1E-8 T 12-10-2018 BEN31_11410 30ba22493427002051da9c0c5bd8b613 301 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 34 91 1.4E-6 T 12-10-2018 IPR008792 Coenzyme PQQ synthesis D BEN31_01110 b7addfa59a26294aaa895bb4722f6ef7 163 PIRSF PIRSF030780 1 160 7.1E-18 T 12-10-2018 IPR016956 Inner membrane protein YdjM BEN31_01110 b7addfa59a26294aaa895bb4722f6ef7 163 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 153 3.2E-32 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BEN31_14475 0916a4a0d69ea25ce82560476b211524 322 SUPERFAMILY SSF52821 88 247 2.61E-35 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_14475 0916a4a0d69ea25ce82560476b211524 322 Pfam PF12368 Rhodanase C-terminal 222 288 2.7E-13 T 12-10-2018 IPR022111 Rhodanase, C-terminal BEN31_14475 0916a4a0d69ea25ce82560476b211524 322 Gene3D G3DSA:3.40.250.10 102 250 8.6E-45 T 12-10-2018 IPR036873 Rhodanese-like domain superfamily BEN31_14475 0916a4a0d69ea25ce82560476b211524 322 SMART SM00450 115 216 2.3E-21 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_14475 0916a4a0d69ea25ce82560476b211524 322 Pfam PF00581 Rhodanese-like domain 117 210 4.7E-11 T 12-10-2018 IPR001763 Rhodanese-like domain BEN31_14475 0916a4a0d69ea25ce82560476b211524 322 Gene3D G3DSA:3.30.70.100 1 97 3.6E-29 T 12-10-2018 BEN31_14475 0916a4a0d69ea25ce82560476b211524 322 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 267 39.62 T 12-10-2018 IPR020936 Uncharacterised protein family UPF0176 BEN31_04635 6e4f9e98a8bc271c498d87b0e549e877 695 SUPERFAMILY SSF109604 480 629 1.73E-15 T 12-10-2018 BEN31_04635 6e4f9e98a8bc271c498d87b0e549e877 695 Pfam PF07698 7TM receptor with intracellular HD hydrolase 260 459 3.2E-51 T 12-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain BEN31_04635 6e4f9e98a8bc271c498d87b0e549e877 695 Pfam PF01966 HD domain 484 625 2.8E-20 T 12-10-2018 IPR006674 HD domain BEN31_04635 6e4f9e98a8bc271c498d87b0e549e877 695 TIGRFAM TIGR00277 HDIG: HDIG domain 481 580 4.8E-29 T 12-10-2018 IPR006675 HDIG domain BEN31_04635 6e4f9e98a8bc271c498d87b0e549e877 695 SMART SM00471 480 635 2.7E-12 T 12-10-2018 IPR003607 HD/PDEase domain BEN31_04635 6e4f9e98a8bc271c498d87b0e549e877 695 Gene3D G3DSA:1.10.3210.10 452 654 6.6E-28 T 12-10-2018 BEN31_04635 6e4f9e98a8bc271c498d87b0e549e877 695 Pfam PF07697 7TM-HD extracellular 37 253 1.2E-38 T 12-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain BEN31_02700 e8249b5af3c8ec209aed77929698ab75 499 Gene3D G3DSA:3.40.190.10 156 495 2.5E-68 T 12-10-2018 BEN31_02700 e8249b5af3c8ec209aed77929698ab75 499 Gene3D G3DSA:3.40.190.10 62 411 2.5E-68 T 12-10-2018 BEN31_02700 e8249b5af3c8ec209aed77929698ab75 499 Pfam PF13416 Bacterial extracellular solute-binding protein 60 329 5.3E-17 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BEN31_02700 e8249b5af3c8ec209aed77929698ab75 499 SUPERFAMILY SSF53850 23 497 1.03E-94 T 12-10-2018 BEN31_15305 0dc3cfb0379b8bbea630f25e552ec4b4 112 TIGRFAM TIGR00526 folB_dom: FolB domain 1 111 1.3E-35 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN31_15305 0dc3cfb0379b8bbea630f25e552ec4b4 112 SUPERFAMILY SSF55620 1 111 9.45E-39 T 12-10-2018 BEN31_15305 0dc3cfb0379b8bbea630f25e552ec4b4 112 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 1 109 2.7E-41 T 12-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN31_15305 0dc3cfb0379b8bbea630f25e552ec4b4 112 Gene3D G3DSA:3.30.1130.10 1 112 3.6E-44 T 12-10-2018 BEN31_15305 0dc3cfb0379b8bbea630f25e552ec4b4 112 SMART SM00905 1 109 3.2E-46 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN31_15305 0dc3cfb0379b8bbea630f25e552ec4b4 112 Pfam PF02152 Dihydroneopterin aldolase 1 108 2.3E-34 T 12-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 BEN31_11020 8627feec1c9eba511001af88dab79b9a 424 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 2 335 6.0E-116 T 12-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase BEN31_11020 8627feec1c9eba511001af88dab79b9a 424 Gene3D G3DSA:3.50.50.60 1 420 9.9E-114 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_11020 8627feec1c9eba511001af88dab79b9a 424 SUPERFAMILY SSF51905 2 226 9.55E-21 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_00870 e2a91d5c24590efd1bf82f05c8b3dbf6 119 Pfam PF05135 Phage gp6-like head-tail connector protein 9 86 2.3E-13 T 12-10-2018 IPR021146 Phage gp6-like head-tail connector protein BEN31_00870 e2a91d5c24590efd1bf82f05c8b3dbf6 119 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 4 87 5.7E-13 T 12-10-2018 IPR006450 Phage protein of unkonwn function BEN31_13750 a2241358f10d977ce372fe57f510f3e7 288 SUPERFAMILY SSF46689 3 64 4.98E-14 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_13750 a2241358f10d977ce372fe57f510f3e7 288 Gene3D G3DSA:1.10.357.10 1 201 1.9E-22 T 12-10-2018 BEN31_13750 a2241358f10d977ce372fe57f510f3e7 288 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_13750 a2241358f10d977ce372fe57f510f3e7 288 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.5E-8 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_13750 a2241358f10d977ce372fe57f510f3e7 288 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.2E-14 T 12-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 BEN31_13170 f629e02bf4d940ecef46b1cc395f0d81 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_13170 f629e02bf4d940ecef46b1cc395f0d81 133 SUPERFAMILY SSF46955 1 118 2.2E-29 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_13170 f629e02bf4d940ecef46b1cc395f0d81 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.8E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_13170 f629e02bf4d940ecef46b1cc395f0d81 133 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.8E-5 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_13170 f629e02bf4d940ecef46b1cc395f0d81 133 SMART SM00422 1 70 1.3E-22 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_13170 f629e02bf4d940ecef46b1cc395f0d81 133 Gene3D G3DSA:1.10.1660.10 1 132 7.5E-32 T 12-10-2018 BEN31_13170 f629e02bf4d940ecef46b1cc395f0d81 133 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.3E-18 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_00835 1a3dde302f9b835b847f3357d7c44d47 565 Gene3D G3DSA:3.40.50.300 50 256 5.5E-19 T 12-10-2018 BEN31_00835 1a3dde302f9b835b847f3357d7c44d47 565 Pfam PF03354 Phage Terminase 82 547 6.8E-89 T 12-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type BEN31_13815 b41f11101c6292581ec58eb5c8882d0f 463 Pfam PF00324 Amino acid permease 5 446 1.3E-119 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_13815 b41f11101c6292581ec58eb5c8882d0f 463 ProSitePatterns PS00218 Amino acid permeases signature. 30 61 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_13815 b41f11101c6292581ec58eb5c8882d0f 463 PIRSF PIRSF006060 1 460 8.3E-85 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_13815 b41f11101c6292581ec58eb5c8882d0f 463 Gene3D G3DSA:1.20.1740.10 1 458 2.1E-70 T 12-10-2018 BEN31_03380 44d6282ebdfe39c238e628ed27e79852 88 Pfam PF06961 Protein of unknown function (DUF1294) 13 67 4.1E-22 T 12-10-2018 IPR010718 Protein of unknown function DUF1294 BEN31_03095 974fee61379f71c7e62d3130ab958210 351 Pfam PF00487 Fatty acid desaturase 56 296 1.7E-34 T 12-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 BEN31_06595 57bfb66750c910030f3f7eb5dafe1283 638 SMART SM00327 442 632 3.9E-19 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_06595 57bfb66750c910030f3f7eb5dafe1283 638 Gene3D G3DSA:3.40.50.410 443 630 5.9E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_06595 57bfb66750c910030f3f7eb5dafe1283 638 SUPERFAMILY SSF53300 446 630 1.63E-16 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_06595 57bfb66750c910030f3f7eb5dafe1283 638 Pfam PF00092 von Willebrand factor type A domain 447 623 9.3E-9 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_05800 9028ffbaa31f8735eda167012243864a 218 Pfam PF13367 Protease prsW family 28 200 8.3E-33 T 12-10-2018 IPR026898 Protease PrsW GO:0008233 BEN31_05800 9028ffbaa31f8735eda167012243864a 218 PIRSF PIRSF016933 1 218 7.9E-89 T 12-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 BEN31_11580 e8b456a048b3482ea49ad80797dec9fc 145 SUPERFAMILY SSF46785 8 137 9.33E-42 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_11580 e8b456a048b3482ea49ad80797dec9fc 145 Gene3D G3DSA:3.30.1490.190 88 145 4.7E-25 T 12-10-2018 BEN31_11580 e8b456a048b3482ea49ad80797dec9fc 145 Gene3D G3DSA:1.10.10.10 1 87 1.4E-33 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11580 e8b456a048b3482ea49ad80797dec9fc 145 Pfam PF01475 Ferric uptake regulator family 15 133 1.5E-40 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BEN31_10950 d4469e8d237db8b8e204b4678f096c9b 206 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 2 185 47.631 T 12-10-2018 IPR023488 HTH-type transcriptional regulator Hpr BEN31_10950 d4469e8d237db8b8e204b4678f096c9b 206 Gene3D G3DSA:1.10.10.10 1 167 2.0E-45 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_10950 d4469e8d237db8b8e204b4678f096c9b 206 Pfam PF01047 MarR family 44 101 1.3E-14 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10950 d4469e8d237db8b8e204b4678f096c9b 206 SUPERFAMILY SSF46785 21 124 2.2E-21 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_10950 d4469e8d237db8b8e204b4678f096c9b 206 SMART SM00347 37 137 4.0E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10950 d4469e8d237db8b8e204b4678f096c9b 206 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 12-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 3.8E-20 T 12-10-2018 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 3.8E-20 T 12-10-2018 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 3.8E-20 T 12-10-2018 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.8E-20 T 12-10-2018 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 Gene3D G3DSA:3.50.50.60 128 247 4.1E-88 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 4.5E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 4.5E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 4.5E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 4.5E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 4.5E-24 T 12-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 Hamap MF_01685 Ferredoxin--NADP reductase. 7 330 38.544 T 12-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 295 3.7E-31 T 12-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 Gene3D G3DSA:3.50.50.60 8 305 4.1E-88 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_11820 51fc6877527b57f4cc252cc30997e086 346 SUPERFAMILY SSF51905 8 311 2.23E-41 T 12-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily BEN31_06815 ef80898f599692eb52a25493f1afca01 577 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_06815 ef80898f599692eb52a25493f1afca01 577 Gene3D G3DSA:1.20.1560.10 1 314 3.7E-88 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_06815 ef80898f599692eb52a25493f1afca01 577 SUPERFAMILY SSF52540 327 569 1.27E-80 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_06815 ef80898f599692eb52a25493f1afca01 577 Pfam PF00664 ABC transporter transmembrane region 18 286 5.7E-47 T 12-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 BEN31_06815 ef80898f599692eb52a25493f1afca01 577 Gene3D G3DSA:3.40.50.300 324 576 1.6E-83 T 12-10-2018 BEN31_06815 ef80898f599692eb52a25493f1afca01 577 SUPERFAMILY SSF90123 2 318 9.68E-78 T 12-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 BEN31_06815 ef80898f599692eb52a25493f1afca01 577 Pfam PF00005 ABC transporter 351 497 6.1E-32 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_06815 ef80898f599692eb52a25493f1afca01 577 SMART SM00382 359 545 1.5E-12 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14145 bcae7ff3f28866314b147c7d3d734def 281 Gene3D G3DSA:1.10.3720.10 83 275 5.2E-35 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_14145 bcae7ff3f28866314b147c7d3d734def 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 265 1.6E-22 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_14145 bcae7ff3f28866314b147c7d3d734def 281 SUPERFAMILY SSF161098 85 269 3.4E-39 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_18280 2d06679d071c90555b02b82d820488d8 87 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 2 85 3.0E-17 T 12-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 BEN31_18280 2d06679d071c90555b02b82d820488d8 87 SUPERFAMILY SSF101498 2 84 3.27E-19 T 12-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily BEN31_18280 2d06679d071c90555b02b82d820488d8 87 Pfam PF04316 Anti-sigma-28 factor, FlgM 32 82 7.1E-15 T 12-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal BEN31_01800 a61268a0d0313cf1b18705e569794470 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 4.1E-16 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_01800 a61268a0d0313cf1b18705e569794470 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 4.1E-16 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_01800 a61268a0d0313cf1b18705e569794470 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 4.1E-16 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_01800 a61268a0d0313cf1b18705e569794470 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 4.1E-16 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_01800 a61268a0d0313cf1b18705e569794470 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 4.1E-16 T 12-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_01800 a61268a0d0313cf1b18705e569794470 492 Pfam PF00361 Proton-conducting membrane transporter 128 414 4.6E-50 T 12-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 BEN31_18590 8df35d4aef22a1d860cb011f306a347d 245 Pfam PF00977 Histidine biosynthesis protein 6 234 5.5E-77 T 12-10-2018 IPR006062 Histidine biosynthesis GO:0000105 BEN31_18590 8df35d4aef22a1d860cb011f306a347d 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 237 9.3E-85 T 12-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BEN31_18590 8df35d4aef22a1d860cb011f306a347d 245 SUPERFAMILY SSF51366 5 240 9.42E-70 T 12-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 BEN31_18590 8df35d4aef22a1d860cb011f306a347d 245 Gene3D G3DSA:3.20.20.70 1 244 1.3E-88 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_18590 8df35d4aef22a1d860cb011f306a347d 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 241 37.028 T 12-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 BEN31_05775 4e97343311fb3de9c88c4767177084e8 150 Pfam PF10864 Protein of unknown function (DUF2663) 17 148 4.4E-46 T 12-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane BEN31_05775 4e97343311fb3de9c88c4767177084e8 150 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 15 148 1.0E-31 T 12-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane BEN31_08855 1112c6d76e8573a7410a9fb30eb2919e 140 SMART SM00116 68 115 5.2E-7 T 12-10-2018 IPR000644 CBS domain BEN31_08855 1112c6d76e8573a7410a9fb30eb2919e 140 SMART SM00116 4 51 1.5E-9 T 12-10-2018 IPR000644 CBS domain BEN31_08855 1112c6d76e8573a7410a9fb30eb2919e 140 Pfam PF00571 CBS domain 61 110 8.4E-13 T 12-10-2018 IPR000644 CBS domain BEN31_08855 1112c6d76e8573a7410a9fb30eb2919e 140 Pfam PF00571 CBS domain 1 47 4.3E-12 T 12-10-2018 IPR000644 CBS domain BEN31_08855 1112c6d76e8573a7410a9fb30eb2919e 140 Gene3D G3DSA:3.10.580.10 1 140 1.4E-36 T 12-10-2018 BEN31_08855 1112c6d76e8573a7410a9fb30eb2919e 140 SUPERFAMILY SSF54631 1 110 7.96E-31 T 12-10-2018 BEN31_07505 9aa8d1857469fd037c128023843df9dc 240 Pfam PF02589 LUD domain 53 237 7.4E-35 T 12-10-2018 IPR003741 LUD domain BEN31_07505 9aa8d1857469fd037c128023843df9dc 240 Gene3D G3DSA:3.40.50.10420 46 237 1.3E-36 T 12-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily BEN31_07505 9aa8d1857469fd037c128023843df9dc 240 Hamap MF_02104 Lactate utilization protein C [lutC]. 4 237 44.508 T 12-10-2018 IPR022823 Lactate utilization protein C BEN31_07505 9aa8d1857469fd037c128023843df9dc 240 SUPERFAMILY SSF100950 46 238 1.17E-39 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_17135 5d46a41244736b3576199d0b3205dcb5 101 Pfam PF11181 Heat induced stress protein YflT 5 98 2.1E-13 T 12-10-2018 IPR025889 General stress protein 17M-like domain BEN31_03010 9b9632b463522c3eeda6f9080bf3cd62 380 Gene3D G3DSA:1.10.260.50 13 279 4.3E-124 T 12-10-2018 BEN31_03010 9b9632b463522c3eeda6f9080bf3cd62 380 Gene3D G3DSA:3.90.1150.10 2 354 4.3E-124 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_03010 9b9632b463522c3eeda6f9080bf3cd62 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 12-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site BEN31_03010 9b9632b463522c3eeda6f9080bf3cd62 380 SUPERFAMILY SSF53383 1 375 2.82E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_03010 9b9632b463522c3eeda6f9080bf3cd62 380 Gene3D G3DSA:3.40.640.10 59 235 4.3E-124 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_03010 9b9632b463522c3eeda6f9080bf3cd62 380 Pfam PF00266 Aminotransferase class-V 2 355 1.4E-71 T 12-10-2018 IPR000192 Aminotransferase class V domain BEN31_03010 9b9632b463522c3eeda6f9080bf3cd62 380 PIRSF PIRSF005572 1 379 7.3E-108 T 12-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 BEN31_12320 579bb1bc836663640cf9f6ffafe4a3fb 159 Gene3D G3DSA:3.90.960.10 2 156 1.7E-38 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN31_12320 579bb1bc836663640cf9f6ffafe4a3fb 159 SUPERFAMILY SSF55826 5 155 2.49E-32 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN31_12320 579bb1bc836663640cf9f6ffafe4a3fb 159 Pfam PF04073 Aminoacyl-tRNA editing domain 27 145 1.8E-30 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BEN31_01525 9ef20af6eb7e5b5b98e696a13eb89c59 166 Gene3D G3DSA:1.10.3760.10 3 166 1.3E-74 T 12-10-2018 BEN31_01525 9ef20af6eb7e5b5b98e696a13eb89c59 166 Pfam PF04608 Phosphatidylglycerophosphatase A 23 159 3.2E-19 T 12-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 BEN31_01525 9ef20af6eb7e5b5b98e696a13eb89c59 166 SUPERFAMILY SSF101307 11 162 2.62E-54 T 12-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 BEN31_01525 9ef20af6eb7e5b5b98e696a13eb89c59 166 PIRSF PIRSF019587 5 166 7.1E-81 T 12-10-2018 IPR026038 Putative phosphatidylglycerophosphatase BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 81 94 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 118 131 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 342 353 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 398 411 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 208 221 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 107 115 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 194 207 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 132 147 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 PRINTS PR00415 Aconitase family signature 285 299 3.0E-44 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 12-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 1.3E-155 T 12-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 59.302 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 Gene3D G3DSA:3.30.499.10 323 471 4.3E-51 T 12-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 SUPERFAMILY SSF53732 1 464 3.4E-165 T 12-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 8.1E-263 T 12-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 BEN31_03660 f331c37fbeac11b0ac46975defeeb677 471 Gene3D G3DSA:3.30.499.20 4 285 8.1E-101 T 12-10-2018 BEN31_15165 773592fbbcf27fb905525073016da68b 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.57 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN31_15165 773592fbbcf27fb905525073016da68b 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 9.6E-72 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN31_15165 773592fbbcf27fb905525073016da68b 158 Pfam PF02542 YgbB family 3 156 4.0E-66 T 12-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN31_15165 773592fbbcf27fb905525073016da68b 158 Gene3D G3DSA:3.30.1330.50 1 158 1.1E-68 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN31_15165 773592fbbcf27fb905525073016da68b 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 12-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN31_15165 773592fbbcf27fb905525073016da68b 158 SUPERFAMILY SSF69765 1 157 9.29E-67 T 12-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 SUPERFAMILY SSF51735 4 230 8.25E-38 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 2.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 2.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.5E-17 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 Gene3D G3DSA:3.40.50.720 2 236 8.1E-44 T 12-10-2018 BEN31_01695 3b6fa9706cd0d6c8ffd1d1912a4c660d 247 Pfam PF00106 short chain dehydrogenase 4 193 9.1E-28 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_16155 8b6fc1cd49cf4ff0fbd3d8780be61962 286 Gene3D G3DSA:3.10.450.200 182 282 1.4E-22 T 12-10-2018 IPR037178 Colicin D, C-terminal domain superfamily GO:0004540 BEN31_16155 8b6fc1cd49cf4ff0fbd3d8780be61962 286 Pfam PF11429 Colicin D 193 275 1.9E-15 T 12-10-2018 IPR024440 Colicin D C-terminal GO:0004540 BEN31_16155 8b6fc1cd49cf4ff0fbd3d8780be61962 286 SUPERFAMILY SSF102824 189 279 7.32E-16 T 12-10-2018 IPR038233 Colicin D/E5 nuclease domain superfamily BEN31_17715 02226fca5a4d021f33d27a830503a295 140 Pfam PF17319 Family of unknown function (DUF5362) 12 107 4.1E-6 T 12-10-2018 IPR035287 Protein of unknown function DUF5362 BEN31_17715 02226fca5a4d021f33d27a830503a295 140 ProDom PD031895 YWNG MEMBRANE TRANSMEMBRANE YWNC 9 102 2.0E-12 T 12-10-2018 IPR035287 Protein of unknown function DUF5362 BEN31_14200 61fcc83030b780c8a9aabdaef9914301 200 Gene3D G3DSA:2.60.60.30 19 197 3.3E-61 T 12-10-2018 BEN31_14200 61fcc83030b780c8a9aabdaef9914301 200 Pfam PF02342 TerD domain 2 199 1.1E-74 T 12-10-2018 IPR003325 TerD domain BEN31_07650 03dccb0d442f8f339d1d45d151f82a44 130 SUPERFAMILY SSF52218 2 121 5.67E-20 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_07650 03dccb0d442f8f339d1d45d151f82a44 130 TIGRFAM TIGR00333 nrdI: nrdI protein 4 123 1.6E-42 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BEN31_07650 03dccb0d442f8f339d1d45d151f82a44 130 Gene3D G3DSA:3.40.50.360 1 130 7.0E-42 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_07650 03dccb0d442f8f339d1d45d151f82a44 130 PIRSF PIRSF005087 1 126 1.2E-36 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BEN31_07650 03dccb0d442f8f339d1d45d151f82a44 130 Hamap MF_00128 Protein NrdI [nrdI]. 2 122 25.641 T 12-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial BEN31_07650 03dccb0d442f8f339d1d45d151f82a44 130 Pfam PF07972 NrdI Flavodoxin like 4 112 6.0E-30 T 12-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI BEN31_10015 a390ccf4eb040c682234c4d1b7932457 276 SUPERFAMILY SSF160631 1 150 1.57E-24 T 12-10-2018 BEN31_10015 a390ccf4eb040c682234c4d1b7932457 276 Pfam PF14568 SMI1-KNR4 cell-wall 20 143 9.0E-22 T 12-10-2018 BEN31_10015 a390ccf4eb040c682234c4d1b7932457 276 SMART SM00860 17 145 9.7E-10 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BEN31_10015 a390ccf4eb040c682234c4d1b7932457 276 Gene3D G3DSA:3.40.1580.10 1 157 6.1E-25 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BEN31_12865 bc60072d71c21f9b6628009011efb5dd 170 Pfam PF11553 Protein of unknown function (DUF3231) 2 166 4.4E-42 T 12-10-2018 IPR021617 Protein of unknown function DUF3231 BEN31_12865 bc60072d71c21f9b6628009011efb5dd 170 Gene3D G3DSA:1.20.1260.10 1 156 3.9E-66 T 12-10-2018 IPR012347 Ferritin-like BEN31_05145 a190ff951909f7c0aa2f2033b8f0f2f3 448 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 356 7.1E-137 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BEN31_05145 a190ff951909f7c0aa2f2033b8f0f2f3 448 Pfam PF02601 Exonuclease VII, large subunit 125 438 4.8E-99 T 12-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 BEN31_05145 a190ff951909f7c0aa2f2033b8f0f2f3 448 Pfam PF13742 OB-fold nucleic acid binding domain 8 102 3.4E-30 T 12-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 BEN31_05145 a190ff951909f7c0aa2f2033b8f0f2f3 448 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 441 29.989 T 12-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 BEN31_16425 30d563d7edf52bd58d480d0d6df53045 112 Pfam PF13108 Protein of unknown function (DUF3969) 10 106 6.5E-26 T 12-10-2018 IPR025083 Protein of unknown function DUF3969 BEN31_17480 b537f70d6cf09cf76b185544b9d0f7a6 176 SUPERFAMILY SSF53697 19 163 6.95E-8 T 12-10-2018 BEN31_17480 b537f70d6cf09cf76b185544b9d0f7a6 176 Gene3D G3DSA:3.40.50.10490 1 176 2.6E-57 T 12-10-2018 BEN31_17480 b537f70d6cf09cf76b185544b9d0f7a6 176 Pfam PF10740 Domain of unknown function (DUF2529) 2 172 3.8E-62 T 12-10-2018 IPR019676 Domain of unknown function (DUF2529) BEN31_16390 242783b5992d38ad1e73b9a7f3a69798 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 269 6.2E-20 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_16390 242783b5992d38ad1e73b9a7f3a69798 280 Gene3D G3DSA:1.10.3720.10 1 267 8.5E-62 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_16390 242783b5992d38ad1e73b9a7f3a69798 280 SUPERFAMILY SSF161098 6 280 6.67E-68 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_11870 f07140f5433873d7d081c063ddccaac5 502 Gene3D G3DSA:1.10.10.10 1 147 4.6E-24 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_11870 f07140f5433873d7d081c063ddccaac5 502 Pfam PF05043 Mga helix-turn-helix domain 78 159 1.8E-17 T 12-10-2018 IPR007737 Mga helix-turn-helix domain BEN31_02240 de4c78ff25abc60c7a33890b4fea484e 185 SUPERFAMILY SSF46785 13 162 9.87E-23 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_02240 de4c78ff25abc60c7a33890b4fea484e 185 Gene3D G3DSA:1.10.10.10 13 94 1.5E-19 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_02240 de4c78ff25abc60c7a33890b4fea484e 185 PIRSF PIRSF006707 1 185 3.8E-53 T 12-10-2018 IPR026282 DNA-binding protein, MJ1563 type BEN31_18125 18684b93c420dc9a068cb76fdb1ea252 377 Gene3D G3DSA:3.40.50.2000 6 361 5.7E-156 T 12-10-2018 BEN31_18125 18684b93c420dc9a068cb76fdb1ea252 377 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 366 9.9E-173 T 12-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 BEN31_18125 18684b93c420dc9a068cb76fdb1ea252 377 Gene3D G3DSA:3.40.50.2000 191 351 5.7E-156 T 12-10-2018 BEN31_18125 18684b93c420dc9a068cb76fdb1ea252 377 SUPERFAMILY SSF53756 4 370 1.3E-137 T 12-10-2018 BEN31_18125 18684b93c420dc9a068cb76fdb1ea252 377 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 363 5.5E-125 T 12-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_04550 6a80a0afc6c5a1f2ff1adfd5b5e94fae 379 SMART SM00729 1 222 5.7E-60 T 12-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 BEN31_04550 6a80a0afc6c5a1f2ff1adfd5b5e94fae 379 Gene3D G3DSA:3.80.30.20 2 301 3.6E-101 T 12-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe BEN31_04550 6a80a0afc6c5a1f2ff1adfd5b5e94fae 379 SUPERFAMILY SSF102114 4 376 3.4E-117 T 12-10-2018 BEN31_04550 6a80a0afc6c5a1f2ff1adfd5b5e94fae 379 Pfam PF04055 Radical SAM superfamily 6 176 2.4E-20 T 12-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 BEN31_04550 6a80a0afc6c5a1f2ff1adfd5b5e94fae 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 3 363 9.5E-150 T 12-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 BEN31_04550 6a80a0afc6c5a1f2ff1adfd5b5e94fae 379 Pfam PF06969 HemN C-terminal domain 302 364 6.4E-16 T 12-10-2018 IPR010723 HemN, C-terminal BEN31_06485 6c3a8d5f12c1d33be6bd990cadc92b34 202 SMART SM00014 76 190 2.1E-25 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN31_06485 6c3a8d5f12c1d33be6bd990cadc92b34 202 Gene3D G3DSA:1.20.144.10 1 108 8.9E-8 T 12-10-2018 BEN31_06485 6c3a8d5f12c1d33be6bd990cadc92b34 202 Gene3D G3DSA:1.20.144.10 109 201 3.5E-25 T 12-10-2018 BEN31_06485 6c3a8d5f12c1d33be6bd990cadc92b34 202 Pfam PF01569 PAP2 superfamily 80 195 1.9E-24 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN31_06485 6c3a8d5f12c1d33be6bd990cadc92b34 202 SUPERFAMILY SSF48317 4 193 1.44E-35 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN31_11120 700bc131de59fc7b21f16b8f55df4f2b 131 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 113 1.1E-24 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN31_11120 700bc131de59fc7b21f16b8f55df4f2b 131 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 118 17.964 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN31_11120 700bc131de59fc7b21f16b8f55df4f2b 131 TIGRFAM TIGR00494 crcB: protein CrcB 5 117 1.0E-25 T 12-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 BEN31_09735 54773bdd1371fbbef27d5d6da32cb623 250 SUPERFAMILY SSF158560 3 73 5.76E-13 T 12-10-2018 BEN31_11665 0527b023d4c8e0e9c6b691a1ac03af4b 281 TIGRFAM TIGR01898 cas_TM1791_cmr6: CRISPR type III-B/RAMP module RAMP protein Cmr6 92 274 1.1E-38 T 12-10-2018 IPR010172 CRISPR-associated protein, TM1791 BEN31_11665 0527b023d4c8e0e9c6b691a1ac03af4b 281 Pfam PF03787 RAMP superfamily 92 275 9.9E-10 T 12-10-2018 IPR005537 CRISPR type III-associated RAMP protein BEN31_00515 7618be5a52758d2fc2b68b4d787d07c2 540 SUPERFAMILY SSF53850 44 527 3.53E-120 T 12-10-2018 BEN31_00515 7618be5a52758d2fc2b68b4d787d07c2 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 454 2.2E-92 T 12-10-2018 IPR000914 Solute-binding protein family 5 domain BEN31_00515 7618be5a52758d2fc2b68b4d787d07c2 540 Gene3D G3DSA:3.40.190.10 67 282 1.6E-140 T 12-10-2018 BEN31_00515 7618be5a52758d2fc2b68b4d787d07c2 540 Gene3D G3DSA:3.10.105.10 283 507 1.6E-140 T 12-10-2018 BEN31_00515 7618be5a52758d2fc2b68b4d787d07c2 540 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 39 538 1.2E-207 T 12-10-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 BEN31_00515 7618be5a52758d2fc2b68b4d787d07c2 540 PIRSF PIRSF002741 5 535 1.7E-100 T 12-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 BEN31_15485 2cd4d47dd17beb9453ba99364680d734 85 Pfam PF06257 Biofilm formation stimulator VEG 4 74 3.5E-31 T 12-10-2018 IPR009366 Protein Veg GO:0006355 BEN31_15485 2cd4d47dd17beb9453ba99364680d734 85 PIRSF PIRSF037257 1 84 9.1E-37 T 12-10-2018 IPR009366 Protein Veg GO:0006355 BEN31_15485 2cd4d47dd17beb9453ba99364680d734 85 Gene3D G3DSA:2.30.30.100 1 78 2.0E-25 T 12-10-2018 BEN31_12895 8b74874a12e861bd958edc35265b42fa 208 SUPERFAMILY SSF55811 5 153 2.34E-19 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN31_12895 8b74874a12e861bd958edc35265b42fa 208 Gene3D G3DSA:3.90.79.10 1 186 1.3E-35 T 12-10-2018 BEN31_12895 8b74874a12e861bd958edc35265b42fa 208 Pfam PF00293 NUDIX domain 48 154 4.6E-7 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN31_07975 7112f2e7b3e5829d323703fbd418d9c8 96 Gene3D G3DSA:3.30.1230.10 2 95 2.8E-34 T 12-10-2018 IPR035931 YlxR-like superfamily BEN31_07975 7112f2e7b3e5829d323703fbd418d9c8 96 SUPERFAMILY SSF64376 5 89 1.96E-26 T 12-10-2018 IPR035931 YlxR-like superfamily BEN31_07975 7112f2e7b3e5829d323703fbd418d9c8 96 Pfam PF04296 Protein of unknown function (DUF448) 10 82 3.5E-26 T 12-10-2018 IPR007393 Domain of unknown function DUF448 BEN31_15925 22930b7d03be04d0384dd9e9b611507b 312 Gene3D G3DSA:1.10.1760.20 3 141 5.2E-6 T 12-10-2018 BEN31_15925 22930b7d03be04d0384dd9e9b611507b 312 Pfam PF09991 Predicted membrane protein (DUF2232) 16 301 2.1E-73 T 12-10-2018 IPR018710 Protein of unknown function DUF2232 BEN31_06740 be2ecbe62055a3e72731ff097fcabb66 110 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 5 109 1.2E-46 T 12-10-2018 IPR008231 Probable chaperone CsaA BEN31_06740 be2ecbe62055a3e72731ff097fcabb66 110 Pfam PF01588 Putative tRNA binding domain 12 108 3.3E-16 T 12-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 BEN31_06740 be2ecbe62055a3e72731ff097fcabb66 110 Gene3D G3DSA:2.40.50.140 1 110 6.1E-31 T 12-10-2018 BEN31_06740 be2ecbe62055a3e72731ff097fcabb66 110 SUPERFAMILY SSF50249 2 109 1.05E-28 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_07310 7159e018979da2745c65d24cff2ef4de 390 SUPERFAMILY SSF103473 7 382 2.49E-38 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_07310 7159e018979da2745c65d24cff2ef4de 390 Gene3D G3DSA:1.20.1250.20 198 384 2.6E-22 T 12-10-2018 BEN31_07310 7159e018979da2745c65d24cff2ef4de 390 Gene3D G3DSA:1.20.1250.20 7 194 6.8E-13 T 12-10-2018 BEN31_07310 7159e018979da2745c65d24cff2ef4de 390 Pfam PF07690 Major Facilitator Superfamily 134 325 2.2E-15 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 SUPERFAMILY SSF51735 1 148 1.32E-21 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 1 88 1.3E-11 T 12-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 1 255 2.5E-78 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 SUPERFAMILY SSF48179 150 258 1.65E-32 T 12-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 211 233 - T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 PIRSF PIRSF000193 1 258 1.0E-71 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 151 254 1.2E-34 T 12-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 Gene3D G3DSA:3.40.50.720 1 152 3.6E-37 T 12-10-2018 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 Gene3D G3DSA:1.10.3730.10 153 260 2.5E-37 T 12-10-2018 BEN31_06785 6d94f4a98b14e79fadd4bf4c1b903699 265 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 255 23.067 T 12-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 BEN31_10250 61d7b4e221622229a34ff2d0c46359ff 255 Pfam PF01464 Transglycosylase SLT domain 139 245 1.9E-29 T 12-10-2018 IPR008258 Transglycosylase SLT domain 1 BEN31_10250 61d7b4e221622229a34ff2d0c46359ff 255 Gene3D G3DSA:1.10.530.10 95 255 6.4E-49 T 12-10-2018 BEN31_10250 61d7b4e221622229a34ff2d0c46359ff 255 SUPERFAMILY SSF53955 135 253 8.73E-46 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 SUPERFAMILY SSF63380 93 195 1.19E-30 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 1.6E-81 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 Gene3D G3DSA:2.40.30.20 1 89 7.9E-33 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 Gene3D G3DSA:2.40.30.20 102 205 1.6E-31 T 12-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 PIRSF PIRSF000498 1 211 2.7E-78 T 12-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 Pfam PF00677 Lumazine binding domain 3 87 6.0E-24 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 Pfam PF00677 Lumazine binding domain 100 184 1.1E-20 T 12-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 BEN31_05640 fbb9e8a99e0b098a1e753d4375273509 216 SUPERFAMILY SSF63380 1 88 1.02E-24 T 12-10-2018 IPR017938 Riboflavin synthase-like beta-barrel BEN31_06030 15c299607232ae4806cfb6a83a98c626 111 Gene3D G3DSA:1.10.287.1080 2 111 6.2E-36 T 12-10-2018 BEN31_06030 15c299607232ae4806cfb6a83a98c626 111 SUPERFAMILY SSF101386 3 105 3.2E-28 T 12-10-2018 BEN31_06030 15c299607232ae4806cfb6a83a98c626 111 PIRSF PIRSF029904 2 111 1.5E-53 T 12-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD BEN31_06030 15c299607232ae4806cfb6a83a98c626 111 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 26 105 3.3E-20 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BEN31_17785 9ddcd8aaa39ab52b3021316b7e4223f1 199 Pfam PF01569 PAP2 superfamily 59 162 7.4E-15 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN31_17785 9ddcd8aaa39ab52b3021316b7e4223f1 199 SUPERFAMILY SSF48317 2 166 5.1E-33 T 12-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily BEN31_17785 9ddcd8aaa39ab52b3021316b7e4223f1 199 SMART SM00014 49 160 5.9E-20 T 12-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase BEN31_17785 9ddcd8aaa39ab52b3021316b7e4223f1 199 Gene3D G3DSA:1.20.144.10 73 175 7.6E-17 T 12-10-2018 BEN31_14100 5647ae96f0665d1ad6e1882122164801 441 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 84 432 8.9E-113 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN31_14100 5647ae96f0665d1ad6e1882122164801 441 PIRSF PIRSF000390 49 440 6.6E-114 T 12-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase BEN31_14100 5647ae96f0665d1ad6e1882122164801 441 Gene3D G3DSA:3.90.1150.10 314 441 2.5E-32 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_14100 5647ae96f0665d1ad6e1882122164801 441 Gene3D G3DSA:3.40.640.10 1 311 2.6E-94 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_14100 5647ae96f0665d1ad6e1882122164801 441 SUPERFAMILY SSF53383 84 437 4.49E-93 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_07390 7f9fff779acd480540b7bb3acfacbea9 48 Hamap MF_00666 Small, acid-soluble spore protein P [sspP]. 1 48 18.483 T 12-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 BEN31_07390 7f9fff779acd480540b7bb3acfacbea9 48 Pfam PF08179 Small acid-soluble spore protein P family 1 43 1.2E-25 T 12-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 BEN31_13820 ba749f02408746d737ed236e590b0116 271 Gene3D G3DSA:3.40.190.10 132 229 3.0E-66 T 12-10-2018 BEN31_13820 ba749f02408746d737ed236e590b0116 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 267 1.3E-54 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_13820 ba749f02408746d737ed236e590b0116 271 SUPERFAMILY SSF53850 1 269 2.42E-61 T 12-10-2018 BEN31_13820 ba749f02408746d737ed236e590b0116 271 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 73 86 - T 12-10-2018 IPR018313 Solute-binding protein family 3, conserved site BEN31_13820 ba749f02408746d737ed236e590b0116 271 Gene3D G3DSA:3.40.190.10 48 260 3.0E-66 T 12-10-2018 BEN31_13820 ba749f02408746d737ed236e590b0116 271 SMART SM00062 49 268 7.1E-76 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 Gene3D G3DSA:1.20.1250.20 2 191 2.6E-15 T 12-10-2018 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 Gene3D G3DSA:1.20.1250.20 217 398 3.5E-12 T 12-10-2018 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 SUPERFAMILY SSF103473 3 398 1.57E-39 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 Pfam PF07690 Major Facilitator Superfamily 15 355 1.6E-22 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 294 317 1.6E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 73 91 1.6E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 164 181 1.6E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 10 32 1.6E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 137 158 1.6E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BEN31_04215 3193040db50494fe379f1841bc4df0a4 406 PRINTS PR01988 Putative bacilysin exporter bacE signature 256 273 1.6E-5 T 12-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 BEN31_07035 8a11e67bac9f9b73b25b20e1d2120a55 133 Gene3D G3DSA:2.40.50.140 48 130 7.4E-28 T 12-10-2018 BEN31_07035 8a11e67bac9f9b73b25b20e1d2120a55 133 Pfam PF11518 Protein of unknown function (DUF3221) 19 130 2.9E-15 T 12-10-2018 IPR021598 Protein of unknown function DUF3221 BEN31_01850 a512bc9841bbc87fcbf1c3dac53efaef 235 PIRSF PIRSF006171 1 227 2.6E-82 T 12-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 BEN31_01850 a512bc9841bbc87fcbf1c3dac53efaef 235 SUPERFAMILY SSF52172 1 152 8.4E-36 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_01850 a512bc9841bbc87fcbf1c3dac53efaef 235 Gene3D G3DSA:3.40.50.2300 1 137 2.6E-32 T 12-10-2018 BEN31_01850 a512bc9841bbc87fcbf1c3dac53efaef 235 SUPERFAMILY SSF46785 175 230 2.29E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_01850 a512bc9841bbc87fcbf1c3dac53efaef 235 Pfam PF00072 Response regulator receiver domain 4 115 4.9E-27 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_01850 a512bc9841bbc87fcbf1c3dac53efaef 235 SMART SM00448 2 115 1.4E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_00670 a4c77566f404229cd87e689a32933492 106 Gene3D G3DSA:1.10.10.10 2 106 3.0E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_00670 a4c77566f404229cd87e689a32933492 106 SUPERFAMILY SSF46785 2 102 2.64E-29 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_00670 a4c77566f404229cd87e689a32933492 106 Pfam PF01638 HxlR-like helix-turn-helix 16 103 7.7E-32 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 SMART SM00862 177 252 3.2E-17 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 Gene3D G3DSA:1.10.10.10 161 258 2.9E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 Pfam PF00072 Response regulator receiver domain 33 141 1.3E-22 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 Pfam PF00486 Transcriptional regulatory protein, C terminal 179 251 4.9E-22 T 12-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 SUPERFAMILY SSF52172 31 153 1.21E-34 T 12-10-2018 IPR011006 CheY-like superfamily BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 SMART SM00448 31 141 2.1E-30 T 12-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 Gene3D G3DSA:3.40.50.2300 31 155 1.4E-29 T 12-10-2018 BEN31_03075 796b9a46943f7c51fa0569b1a57a2249 258 SUPERFAMILY SSF46894 160 251 1.79E-23 T 12-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 Pfam PF00381 PTS HPr component phosphorylation site 2 82 4.4E-31 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 Gene3D G3DSA:3.30.1340.10 1 85 2.2E-35 T 12-10-2018 IPR035895 HPr-like superfamily BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 12-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.1E-21 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.1E-21 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.1E-21 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 3.5E-31 T 12-10-2018 IPR000032 Phosphocarrier protein HPr-like BEN31_18640 69b6c80500a23e4565e55f18569bbbe3 85 SUPERFAMILY SSF55594 3 83 4.06E-29 T 12-10-2018 IPR035895 HPr-like superfamily BEN31_10110 53671800a940948f411aa3f7c15ad959 144 SUPERFAMILY SSF55729 3 143 1.65E-34 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_10110 53671800a940948f411aa3f7c15ad959 144 Gene3D G3DSA:3.40.630.30 3 144 2.2E-38 T 12-10-2018 BEN31_10110 53671800a940948f411aa3f7c15ad959 144 Pfam PF13673 Acetyltransferase (GNAT) domain 13 142 1.7E-21 T 12-10-2018 IPR000182 GNAT domain BEN31_02835 5fa2816df3d6024043ea73a440fe6b61 91 Pfam PF14165 YtzH-like protein 3 88 1.2E-35 T 12-10-2018 IPR025547 YtzH-like protein BEN31_07770 50016c00b82860dc3d6644b7d8cc22e5 392 SUPERFAMILY SSF53383 2 389 6.25E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_07770 50016c00b82860dc3d6644b7d8cc22e5 392 Gene3D G3DSA:3.40.640.10 55 289 2.6E-144 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_07770 50016c00b82860dc3d6644b7d8cc22e5 392 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 7 391 4.0E-188 T 12-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type BEN31_07770 50016c00b82860dc3d6644b7d8cc22e5 392 Pfam PF00155 Aminotransferase class I and II 41 381 4.9E-64 T 12-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 BEN31_07770 50016c00b82860dc3d6644b7d8cc22e5 392 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 381 7.9E-135 T 12-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 BEN31_07770 50016c00b82860dc3d6644b7d8cc22e5 392 Gene3D G3DSA:3.90.1150.10 35 382 2.6E-144 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_07770 50016c00b82860dc3d6644b7d8cc22e5 392 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 236 245 - T 12-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 BEN31_04435 c675cf0a4dc965f774efb81f6fb205ee 373 Gene3D G3DSA:1.25.40.10 1 373 1.1E-113 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_04435 c675cf0a4dc965f774efb81f6fb205ee 373 Pfam PF13181 Tetratricopeptide repeat 218 246 0.0024 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_04435 c675cf0a4dc965f774efb81f6fb205ee 373 SUPERFAMILY SSF48452 100 302 6.64E-19 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_15965 4b081932fa3bfaa1d272f856b8166446 75 SMART SM00923 3 53 6.9E-29 T 12-10-2018 IPR005153 MbtH-like domain BEN31_15965 4b081932fa3bfaa1d272f856b8166446 75 Gene3D G3DSA:3.90.820.10 1 69 1.8E-32 T 12-10-2018 BEN31_15965 4b081932fa3bfaa1d272f856b8166446 75 SUPERFAMILY SSF160582 1 65 1.02E-28 T 12-10-2018 IPR038020 MbtH-like domain superfamily BEN31_15965 4b081932fa3bfaa1d272f856b8166446 75 Pfam PF03621 MbtH-like protein 1 52 1.6E-27 T 12-10-2018 IPR005153 MbtH-like domain BEN31_09395 35eb98b08b3f0e175839f0e47155374b 162 Pfam PF00578 AhpC/TSA family 49 144 5.3E-20 T 12-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 BEN31_09395 35eb98b08b3f0e175839f0e47155374b 162 ProSitePatterns PS00194 Thioredoxin family active site. 55 73 - T 12-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 BEN31_09395 35eb98b08b3f0e175839f0e47155374b 162 Gene3D G3DSA:3.40.30.10 21 161 2.9E-35 T 12-10-2018 BEN31_09395 35eb98b08b3f0e175839f0e47155374b 162 SUPERFAMILY SSF52833 48 159 2.57E-30 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_11000 f47f9367e5bc85f28ea878f724e80a8c 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 254 1.2E-41 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN31_11000 f47f9367e5bc85f28ea878f724e80a8c 256 Gene3D G3DSA:3.90.226.10 1 193 6.5E-50 T 12-10-2018 BEN31_11000 f47f9367e5bc85f28ea878f724e80a8c 256 SUPERFAMILY SSF52096 3 254 7.47E-63 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_11000 f47f9367e5bc85f28ea878f724e80a8c 256 Gene3D G3DSA:1.10.12.10 199 255 4.8E-16 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 204 241 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 Pfam PF00202 Aminotransferase class-III 13 376 4.6E-129 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 Gene3D G3DSA:3.40.640.10 47 286 5.3E-141 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 376 2.0E-156 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 SUPERFAMILY SSF53383 2 376 5.78E-129 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 PIRSF PIRSF000521 106 147 0.08 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 PIRSF PIRSF000521 5 109 3.7E-8 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 PIRSF PIRSF000521 155 379 5.2E-41 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 379 69.899 T 12-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 BEN31_10435 0fdabc3f09c89d4b62d83abf2fe31aad 383 Gene3D G3DSA:3.90.1150.10 13 366 5.3E-141 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_03105 00682c97bb7b944024152d9945a6e6b5 267 Gene3D G3DSA:3.40.50.10330 34 267 5.9E-75 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BEN31_03105 00682c97bb7b944024152d9945a6e6b5 267 Hamap MF_00361 NAD kinase [nadK]. 6 267 20.174 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN31_03105 00682c97bb7b944024152d9945a6e6b5 267 Pfam PF01513 ATP-NAD kinase 40 217 2.9E-18 T 12-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN31_03105 00682c97bb7b944024152d9945a6e6b5 267 SUPERFAMILY SSF111331 17 266 7.63E-56 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BEN31_03105 00682c97bb7b944024152d9945a6e6b5 267 Gene3D G3DSA:2.60.200.30 109 245 5.9E-75 T 12-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 BEN31_09510 644b7812cb29ab61f9eaee5d2d23aaf8 353 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 336 7.0E-139 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN31_09510 644b7812cb29ab61f9eaee5d2d23aaf8 353 Pfam PF01008 Initiation factor 2 subunit family 49 336 8.3E-93 T 12-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 BEN31_09510 644b7812cb29ab61f9eaee5d2d23aaf8 353 Gene3D G3DSA:1.20.120.420 1 148 5.1E-51 T 12-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN31_09510 644b7812cb29ab61f9eaee5d2d23aaf8 353 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 37 336 9.9E-133 T 12-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN31_09510 644b7812cb29ab61f9eaee5d2d23aaf8 353 SUPERFAMILY SSF100950 5 343 1.76E-117 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_09510 644b7812cb29ab61f9eaee5d2d23aaf8 353 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 347 38.308 T 12-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 BEN31_09510 644b7812cb29ab61f9eaee5d2d23aaf8 353 Gene3D G3DSA:3.40.50.10470 149 352 6.8E-71 T 12-10-2018 BEN31_05685 51b77c757da7df51894fd220a2a31d5d 195 Pfam PF07670 Nucleoside recognition 43 150 2.3E-10 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN31_12590 4f653150b9a9abcc17b4c5856745335a 454 SUPERFAMILY SSF53383 12 439 1.92E-117 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_12590 4f653150b9a9abcc17b4c5856745335a 454 Gene3D G3DSA:3.90.1150.10 17 437 4.5E-146 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_12590 4f653150b9a9abcc17b4c5856745335a 454 PIRSF PIRSF000521 17 440 4.3E-37 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_12590 4f653150b9a9abcc17b4c5856745335a 454 Gene3D G3DSA:3.40.640.10 51 326 4.5E-146 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_12590 4f653150b9a9abcc17b4c5856745335a 454 Pfam PF00202 Aminotransferase class-III 18 437 1.7E-102 T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_12590 4f653150b9a9abcc17b4c5856745335a 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 12-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 BEN31_10715 8b36883238290bbe23897dfdeac1b80e 140 PIRSF PIRSF019455 13 140 3.2E-20 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BEN31_10715 8b36883238290bbe23897dfdeac1b80e 140 Pfam PF03965 Penicillinase repressor 18 130 1.3E-22 T 12-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 BEN31_10715 8b36883238290bbe23897dfdeac1b80e 140 Gene3D G3DSA:1.10.10.10 14 81 8.1E-17 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_10715 8b36883238290bbe23897dfdeac1b80e 140 SUPERFAMILY SSF46785 18 134 3.71E-20 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14270 1ee8a492cdbee83511cfa875c25e8eb3 361 SUPERFAMILY SSF103642 4 24 6.05E-7 T 12-10-2018 BEN31_14270 1ee8a492cdbee83511cfa875c25e8eb3 361 Gene3D G3DSA:3.10.450.50 2 25 2.9E-5 T 12-10-2018 BEN31_14270 1ee8a492cdbee83511cfa875c25e8eb3 361 Pfam PF02810 SEC-C motif 6 24 7.4E-10 T 12-10-2018 IPR004027 SEC-C motif BEN31_14270 1ee8a492cdbee83511cfa875c25e8eb3 361 Pfam PF05225 helix-turn-helix, Psq domain 308 350 4.7E-6 T 12-10-2018 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 BEN31_02715 bb4bcf10bfade0800a7283df2504d1e7 123 Pfam PF01638 HxlR-like helix-turn-helix 16 104 5.3E-40 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_02715 bb4bcf10bfade0800a7283df2504d1e7 123 SUPERFAMILY SSF46785 3 110 1.42E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_02715 bb4bcf10bfade0800a7283df2504d1e7 123 Gene3D G3DSA:1.10.10.10 2 108 1.6E-38 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_16735 db3a5cb031ef45e8ef27cef8cf4d705e 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 1.5E-17 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_16735 db3a5cb031ef45e8ef27cef8cf4d705e 141 Gene3D G3DSA:3.10.180.10 1 136 2.1E-41 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_16735 db3a5cb031ef45e8ef27cef8cf4d705e 141 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 2 139 41.848 T 12-10-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 BEN31_16735 db3a5cb031ef45e8ef27cef8cf4d705e 141 SUPERFAMILY SSF54593 3 130 1.48E-28 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_02645 d0db9c5a78805b2aab8905a61181109f 292 SMART SM00382 26 203 2.4E-11 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_02645 d0db9c5a78805b2aab8905a61181109f 292 Gene3D G3DSA:3.40.50.300 1 238 1.3E-43 T 12-10-2018 BEN31_02645 d0db9c5a78805b2aab8905a61181109f 292 Pfam PF00005 ABC transporter 17 154 1.1E-20 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_02645 d0db9c5a78805b2aab8905a61181109f 292 SUPERFAMILY SSF52540 2 218 1.04E-46 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_17685 9d71edcab57636415cf5df82844cc3e1 421 SUPERFAMILY SSF103473 4 406 1.15E-59 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_17685 9d71edcab57636415cf5df82844cc3e1 421 Gene3D G3DSA:1.20.1250.20 1 408 1.3E-53 T 12-10-2018 BEN31_17685 9d71edcab57636415cf5df82844cc3e1 421 Pfam PF07690 Major Facilitator Superfamily 23 365 4.8E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_18485 6b462d86994c7d1b75ce7a0437a3c30a 111 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 7 108 7.0E-21 T 12-10-2018 BEN31_17795 546f603e797eb4c729c0eed7f936e6c4 137 SMART SM00347 25 124 1.2E-28 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_17795 546f603e797eb4c729c0eed7f936e6c4 137 Pfam PF01047 MarR family 32 88 1.8E-15 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_17795 546f603e797eb4c729c0eed7f936e6c4 137 Gene3D G3DSA:1.10.10.10 1 137 1.8E-32 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_17795 546f603e797eb4c729c0eed7f936e6c4 137 SUPERFAMILY SSF46785 3 135 4.72E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_17795 546f603e797eb4c729c0eed7f936e6c4 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 1.5E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_17795 546f603e797eb4c729c0eed7f936e6c4 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.5E-8 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_10295 11b7f40f047be4ae639e0a9934c3bedf 192 Gene3D G3DSA:3.40.630.30 1 133 5.7E-23 T 12-10-2018 BEN31_10295 11b7f40f047be4ae639e0a9934c3bedf 192 Pfam PF13508 Acetyltransferase (GNAT) domain 52 110 1.1E-6 T 12-10-2018 IPR000182 GNAT domain BEN31_10295 11b7f40f047be4ae639e0a9934c3bedf 192 SUPERFAMILY SSF55729 48 115 1.92E-7 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_15040 9dcccff0ad34fe88a22bf3c4a66c7323 207 Gene3D G3DSA:3.40.1370.10 3 207 2.9E-82 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_15040 9dcccff0ad34fe88a22bf3c4a66c7323 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.6E-83 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15040 9dcccff0ad34fe88a22bf3c4a66c7323 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 5.7E-73 T 12-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 BEN31_15040 9dcccff0ad34fe88a22bf3c4a66c7323 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 37.841 T 12-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 BEN31_15040 9dcccff0ad34fe88a22bf3c4a66c7323 207 SUPERFAMILY SSF52166 1 206 1.13E-84 T 12-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 BEN31_04945 a635e91a790c874ec47111f90ed45830 97 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN31_04945 a635e91a790c874ec47111f90ed45830 97 SUPERFAMILY SSF54523 6 86 6.75E-11 T 12-10-2018 BEN31_04945 a635e91a790c874ec47111f90ed45830 97 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.2E-8 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN31_04945 a635e91a790c874ec47111f90ed45830 97 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 4.6E-9 T 12-10-2018 IPR012902 Prokaryotic N-terminal methylation site BEN31_04945 a635e91a790c874ec47111f90ed45830 97 Gene3D G3DSA:3.30.700.10 6 95 2.8E-7 T 12-10-2018 BEN31_04945 a635e91a790c874ec47111f90ed45830 97 PIRSF PIRSF029928 1 97 1.4E-32 T 12-10-2018 IPR016940 ComG operon protein C GO:0030420 BEN31_14495 1026efddd91b7ee8cd6ea69003df1873 153 Pfam PF04463 Protein of unknown function (DUF523) 2 146 1.1E-42 T 12-10-2018 IPR007553 Domain of unknown function DUF523 BEN31_02095 32b392590afbb31364f857180ed0fb36 214 SUPERFAMILY SSF46689 5 47 6.81E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_02095 32b392590afbb31364f857180ed0fb36 214 Pfam PF13384 Homeodomain-like domain 5 39 2.7E-7 T 12-10-2018 BEN31_04745 8cf697b2f3f4999bff98ec69b7d32d91 293 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 231 285 3.6E-21 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BEN31_04745 8cf697b2f3f4999bff98ec69b7d32d91 293 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 225 1.1E-64 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_04745 8cf697b2f3f4999bff98ec69b7d32d91 293 PIRSF PIRSF006483 1 292 1.8E-89 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_04745 8cf697b2f3f4999bff98ec69b7d32d91 293 Gene3D G3DSA:3.30.70.120 203 278 1.4E-24 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_14190 1459ce6e887b65bd8b8b0c1ec8fcfb8a 192 Gene3D G3DSA:2.60.60.30 19 187 3.6E-73 T 12-10-2018 BEN31_14190 1459ce6e887b65bd8b8b0c1ec8fcfb8a 192 Pfam PF02342 TerD domain 1 188 4.2E-86 T 12-10-2018 IPR003325 TerD domain BEN31_14385 30701c9793560802589ed44ba5962073 312 PIRSF PIRSF037505 265 311 7.7 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BEN31_14385 30701c9793560802589ed44ba5962073 312 PIRSF PIRSF037505 2 165 8.8E-6 T 12-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 BEN31_14385 30701c9793560802589ed44ba5962073 312 SUPERFAMILY SSF82282 6 309 6.54E-88 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN31_14385 30701c9793560802589ed44ba5962073 312 Gene3D G3DSA:3.20.20.330 1 309 1.9E-111 T 12-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 BEN31_14385 30701c9793560802589ed44ba5962073 312 Pfam PF02574 Homocysteine S-methyltransferase 14 308 2.5E-81 T 12-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 BEN31_05705 4486bb4a4f4a1d122cbb20e451da96a7 559 Pfam PF05140 ResB-like family 66 429 1.8E-72 T 12-10-2018 IPR007816 ResB-like domain BEN31_05705 4486bb4a4f4a1d122cbb20e451da96a7 559 Pfam PF05140 ResB-like family 442 522 1.8E-18 T 12-10-2018 IPR007816 ResB-like domain BEN31_04230 59b309165ebd3c16ca23f8f528306889 237 Gene3D G3DSA:1.10.3720.10 3 230 2.8E-50 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04230 59b309165ebd3c16ca23f8f528306889 237 SUPERFAMILY SSF161098 14 217 3.38E-39 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04230 59b309165ebd3c16ca23f8f528306889 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 229 2.9E-17 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_04230 59b309165ebd3c16ca23f8f528306889 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 123 4.9E-21 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_07230 a50984a8cfebb55371f7cb0f61c270c7 216 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 7 111 3.0E-43 T 12-10-2018 IPR013559 YheO-like BEN31_07230 a50984a8cfebb55371f7cb0f61c270c7 216 Pfam PF13309 HTH domain 150 209 2.1E-21 T 12-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain BEN31_07230 a50984a8cfebb55371f7cb0f61c270c7 216 Pfam PF08348 YheO-like PAS domain 8 120 9.5E-39 T 12-10-2018 IPR013559 YheO-like BEN31_01960 710a5d46feadd59da4751f9a7c1e0c7b 328 Pfam PF02254 TrkA-N domain 118 238 1.5E-16 T 12-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 BEN31_01960 710a5d46feadd59da4751f9a7c1e0c7b 328 Gene3D G3DSA:3.40.50.720 110 251 6.4E-25 T 12-10-2018 BEN31_01960 710a5d46feadd59da4751f9a7c1e0c7b 328 Pfam PF07885 Ion channel 22 97 8.4E-15 T 12-10-2018 IPR013099 Potassium channel domain BEN31_01960 710a5d46feadd59da4751f9a7c1e0c7b 328 SUPERFAMILY SSF81324 9 130 1.83E-23 T 12-10-2018 BEN31_01960 710a5d46feadd59da4751f9a7c1e0c7b 328 SUPERFAMILY SSF51735 115 249 6.69E-16 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_01960 710a5d46feadd59da4751f9a7c1e0c7b 328 Gene3D G3DSA:1.10.287.70 12 108 6.3E-19 T 12-10-2018 BEN31_00975 033b51ba14173bb3214d43c46cdfc7b6 306 Gene3D G3DSA:1.10.600.10 5 306 2.7E-64 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_00975 033b51ba14173bb3214d43c46cdfc7b6 306 Pfam PF03936 Terpene synthase family, metal binding domain 137 258 2.6E-7 T 12-10-2018 IPR005630 Terpene synthase, metal-binding domain GO:0000287|GO:0010333|GO:0016829 BEN31_00975 033b51ba14173bb3214d43c46cdfc7b6 306 SUPERFAMILY SSF48576 14 303 3.74E-49 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_01785 7768dc594597b22c9d84bde0628c35e1 124 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 108 1.1E-35 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BEN31_01785 7768dc594597b22c9d84bde0628c35e1 124 Pfam PF03334 Na+/H+ antiporter subunit 12 93 8.1E-30 T 12-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 BEN31_13880 298eb9e4813babd854a4669862ed6c27 246 Pfam PF00975 Thioesterase domain 16 232 1.8E-44 T 12-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 BEN31_13880 298eb9e4813babd854a4669862ed6c27 246 Gene3D G3DSA:3.40.50.1820 2 237 1.9E-55 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13880 298eb9e4813babd854a4669862ed6c27 246 SMART SM00824 Thioesterase 18 235 0.0022 T 12-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 BEN31_13880 298eb9e4813babd854a4669862ed6c27 246 SUPERFAMILY SSF53474 12 235 1.22E-42 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_17080 61d39e46c483726d7c0511cb95b7214d 249 Gene3D G3DSA:3.40.109.10 1 249 9.2E-74 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_17080 61d39e46c483726d7c0511cb95b7214d 249 PIRSF PIRSF005426 1 249 4.3E-91 T 12-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 BEN31_17080 61d39e46c483726d7c0511cb95b7214d 249 Pfam PF00881 Nitroreductase family 8 165 1.3E-19 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN31_17080 61d39e46c483726d7c0511cb95b7214d 249 SUPERFAMILY SSF55469 2 248 3.53E-68 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_15910 628af5d1f18c1d0c66ad69d71cdb4b44 164 Pfam PF08281 Sigma-70, region 4 103 155 1.4E-12 T 12-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 BEN31_15910 628af5d1f18c1d0c66ad69d71cdb4b44 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 159 5.9E-25 T 12-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 BEN31_15910 628af5d1f18c1d0c66ad69d71cdb4b44 164 SUPERFAMILY SSF88659 101 159 1.85E-14 T 12-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BEN31_15910 628af5d1f18c1d0c66ad69d71cdb4b44 164 Pfam PF04542 Sigma-70 region 2 15 80 2.1E-13 T 12-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_15910 628af5d1f18c1d0c66ad69d71cdb4b44 164 Gene3D G3DSA:1.10.10.10 97 161 9.7E-18 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_15910 628af5d1f18c1d0c66ad69d71cdb4b44 164 SUPERFAMILY SSF88946 8 92 1.73E-19 T 12-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 BEN31_15910 628af5d1f18c1d0c66ad69d71cdb4b44 164 Gene3D G3DSA:1.10.1740.10 2 82 1.1E-20 T 12-10-2018 BEN31_09815 2c7e913f7a82d07f5d66319d728d7899 441 Gene3D G3DSA:1.20.1740.10 7 441 1.8E-93 T 12-10-2018 BEN31_09815 2c7e913f7a82d07f5d66319d728d7899 441 PIRSF PIRSF006060 1 441 1.9E-80 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_09815 2c7e913f7a82d07f5d66319d728d7899 441 Pfam PF13520 Amino acid permease 12 408 2.2E-55 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_14505 c948971ad671deaf7b85c15e49808fc2 152 Pfam PF01047 MarR family 41 100 1.5E-10 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_14505 c948971ad671deaf7b85c15e49808fc2 152 SUPERFAMILY SSF46785 40 150 2.03E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_14505 c948971ad671deaf7b85c15e49808fc2 152 Gene3D G3DSA:1.10.10.10 9 152 1.0E-23 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14505 c948971ad671deaf7b85c15e49808fc2 152 SMART SM00347 34 138 5.6E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_01765 cfed28dccc9315e7d348fedaabc22a71 291 SUPERFAMILY SSF48576 30 286 7.67E-29 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_01765 cfed28dccc9315e7d348fedaabc22a71 291 Pfam PF00348 Polyprenyl synthetase 33 197 3.4E-13 T 12-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 BEN31_01765 cfed28dccc9315e7d348fedaabc22a71 291 Gene3D G3DSA:1.10.600.10 3 288 1.9E-28 T 12-10-2018 IPR008949 Isoprenoid synthase domain superfamily BEN31_16490 540456f1f0ca8f85bf42e7fe058b7ace 607 Pfam PF01757 Acyltransferase family 13 329 4.5E-22 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BEN31_16490 540456f1f0ca8f85bf42e7fe058b7ace 607 Gene3D G3DSA:3.40.50.1110 428 600 1.7E-13 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BEN31_16490 540456f1f0ca8f85bf42e7fe058b7ace 607 SUPERFAMILY SSF52266 449 599 1.67E-16 T 12-10-2018 BEN31_12885 7162425c3043f05490b09be67e3fd6c3 244 Pfam PF02517 CAAX protease self-immunity 128 214 1.3E-16 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BEN31_00465 e6ba3270b52929803e991403274ccedb 379 Pfam PF00534 Glycosyl transferases group 1 185 349 9.0E-39 T 12-10-2018 IPR001296 Glycosyl transferase, family 1 BEN31_00465 e6ba3270b52929803e991403274ccedb 379 Gene3D G3DSA:3.40.50.2000 171 355 1.4E-74 T 12-10-2018 BEN31_00465 e6ba3270b52929803e991403274ccedb 379 Gene3D G3DSA:3.40.50.2000 26 368 1.4E-74 T 12-10-2018 BEN31_00465 e6ba3270b52929803e991403274ccedb 379 Pfam PF13477 Glycosyl transferase 4-like 4 146 1.0E-15 T 12-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 BEN31_00465 e6ba3270b52929803e991403274ccedb 379 SUPERFAMILY SSF53756 19 368 1.41E-74 T 12-10-2018 BEN31_06960 8556c25582fed3b690f4bbcfe78d1300 377 Gene3D G3DSA:1.10.10.2840 243 367 1.2E-18 T 12-10-2018 BEN31_06960 8556c25582fed3b690f4bbcfe78d1300 377 Pfam PF13556 PucR C-terminal helix-turn-helix domain 304 361 3.2E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_06960 8556c25582fed3b690f4bbcfe78d1300 377 Pfam PF05651 Putative sugar diacid recognition 2 135 7.5E-44 T 12-10-2018 IPR008599 Putative sugar diacid recognition BEN31_14625 07879a8f85d0e9e8d5fa7ba8eb3f959d 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.4E-13 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_14625 07879a8f85d0e9e8d5fa7ba8eb3f959d 123 Gene3D G3DSA:1.10.10.10 10 123 2.0E-26 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_14625 07879a8f85d0e9e8d5fa7ba8eb3f959d 123 SMART SM00345 17 76 1.5E-11 T 12-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 BEN31_14625 07879a8f85d0e9e8d5fa7ba8eb3f959d 123 SUPERFAMILY SSF46785 7 85 9.16E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_18620 785e7ea6e6f79f4e215a9843cb5425d5 154 PRINTS PR00502 NUDIX hydrolase family signature 40 55 6.1E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN31_18620 785e7ea6e6f79f4e215a9843cb5425d5 154 PRINTS PR00502 NUDIX hydrolase family signature 26 40 6.1E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN31_18620 785e7ea6e6f79f4e215a9843cb5425d5 154 Pfam PF00293 NUDIX domain 3 121 8.2E-16 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN31_18620 785e7ea6e6f79f4e215a9843cb5425d5 154 SUPERFAMILY SSF55811 4 128 9.21E-28 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN31_18620 785e7ea6e6f79f4e215a9843cb5425d5 154 Gene3D G3DSA:3.90.79.10 1 153 1.5E-42 T 12-10-2018 BEN31_18370 05169e9dc71ccc5c9a872b81419976ab 282 Gene3D G3DSA:3.30.70.120 193 269 4.8E-24 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_18370 05169e9dc71ccc5c9a872b81419976ab 282 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 14 216 3.2E-62 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_18370 05169e9dc71ccc5c9a872b81419976ab 282 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 2.5E-19 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BEN31_18370 05169e9dc71ccc5c9a872b81419976ab 282 PIRSF PIRSF006483 1 282 3.8E-83 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_02825 25c83a851fab412259b6cb288f74e268 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 308 9.8E-71 T 12-10-2018 IPR005218 Diacylglycerol/lipid kinase BEN31_02825 25c83a851fab412259b6cb288f74e268 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 126 1.9E-26 T 12-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 BEN31_02825 25c83a851fab412259b6cb288f74e268 309 Gene3D G3DSA:2.60.200.40 138 300 1.8E-30 T 12-10-2018 BEN31_02825 25c83a851fab412259b6cb288f74e268 309 SUPERFAMILY SSF111331 2 308 7.41E-60 T 12-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily BEN31_02825 25c83a851fab412259b6cb288f74e268 309 Gene3D G3DSA:3.40.50.10330 1 132 1.3E-28 T 12-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 BEN31_14245 bfb5815973e902c185fcd68c6999e132 246 Pfam PF00005 ABC transporter 22 165 2.6E-33 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_14245 bfb5815973e902c185fcd68c6999e132 246 SMART SM00382 30 215 3.7E-13 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_14245 bfb5815973e902c185fcd68c6999e132 246 Gene3D G3DSA:3.40.50.300 1 244 8.7E-67 T 12-10-2018 BEN31_14245 bfb5815973e902c185fcd68c6999e132 246 SUPERFAMILY SSF52540 2 228 6.02E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 268 355 1.0E-5 T 12-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 251 5.5E-74 T 12-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 125 3.9E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 3.9E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 3.9E-16 T 12-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 Gene3D G3DSA:2.30.140.30 268 359 3.2E-28 T 12-10-2018 BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 SUPERFAMILY SSF56601 3 268 4.83E-65 T 12-10-2018 IPR012338 Beta-lactamase/transpeptidase-like BEN31_05680 dee96ec85fc698ed4d2869506b91735b 383 Gene3D G3DSA:3.40.710.10 32 267 1.4E-88 T 12-10-2018 BEN31_02040 255639f286d13754a73b7d0e56617941 380 Pfam PF01594 AI-2E family transporter 32 363 2.5E-84 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BEN31_01645 61dea7d8a695e240b8c6699deb14fbe8 258 SUPERFAMILY SSF81296 17 110 1.4E-8 T 12-10-2018 IPR014756 Immunoglobulin E-set BEN31_01645 61dea7d8a695e240b8c6699deb14fbe8 258 Gene3D G3DSA:2.60.40.640 15 128 3.0E-7 T 12-10-2018 IPR014752 Arrestin, C-terminal BEN31_01645 61dea7d8a695e240b8c6699deb14fbe8 258 Pfam PF07070 SpoOM protein 4 212 2.2E-72 T 12-10-2018 IPR009776 Sporulation stage 0, protein M BEN31_17555 6322b1b6933391daabb0bcfb264b482e 218 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 5 170 1.3E-66 T 12-10-2018 IPR014202 Sporulation stage II, protein R BEN31_17555 6322b1b6933391daabb0bcfb264b482e 218 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 41 166 6.1E-48 T 12-10-2018 IPR014202 Sporulation stage II, protein R BEN31_00665 826337607fc157aa5ad56d58367fd6f5 229 Gene3D G3DSA:1.10.3720.10 12 210 1.2E-33 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00665 826337607fc157aa5ad56d58367fd6f5 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 212 2.3E-27 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_00665 826337607fc157aa5ad56d58367fd6f5 229 SUPERFAMILY SSF161098 17 202 7.85E-37 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_09415 07ba492d02e92258f4f6cf54c2bc0875 62 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 5.3E-28 T 12-10-2018 IPR018690 Protein of unknown function DUF2187 BEN31_01070 3bd9798124d8c4c9c6342f6872dd2f77 203 Pfam PF03458 UPF0126 domain 92 161 2.2E-18 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 BEN31_01070 3bd9798124d8c4c9c6342f6872dd2f77 203 Pfam PF03458 UPF0126 domain 5 78 8.3E-19 T 12-10-2018 IPR005115 Uncharacterised domain UPF0126 BEN31_08940 45844984c568816f7993678a6febc06b 76 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 1 56 2.6E-30 T 12-10-2018 IPR019241 Protein of unknown function DUF2197 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 Gene3D G3DSA:2.40.50.140 1 66 1.4E-30 T 12-10-2018 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 6.0E-30 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 PRINTS PR00050 Cold shock protein signature 39 57 7.2E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 PRINTS PR00050 Cold shock protein signature 24 33 7.2E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 PRINTS PR00050 Cold shock protein signature 4 19 7.2E-19 T 12-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 12-10-2018 IPR019844 Cold-shock conserved site BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 SMART SM00357 3 66 2.4E-30 T 12-10-2018 IPR011129 Cold shock domain GO:0003676 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 PIRSF PIRSF002599 1 66 5.8E-24 T 12-10-2018 IPR012156 Cold shock, CspA GO:0003676 BEN31_11335 18c8c5fb2ca5ce1ea8304b181ecd3f05 66 SUPERFAMILY SSF50249 1 64 2.29E-24 T 12-10-2018 IPR012340 Nucleic acid-binding, OB-fold BEN31_07915 e80be0cf78355c308d5a1950cd9ed15b 90 Gene3D G3DSA:2.30.30.240 2 79 5.9E-9 T 12-10-2018 BEN31_07915 e80be0cf78355c308d5a1950cd9ed15b 90 Pfam PF05239 PRC-barrel domain 2 80 1.8E-16 T 12-10-2018 IPR027275 PRC-barrel domain BEN31_07915 e80be0cf78355c308d5a1950cd9ed15b 90 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 1.9E-29 T 12-10-2018 IPR014238 Sporulation protein YlmC/YmxH BEN31_07915 e80be0cf78355c308d5a1950cd9ed15b 90 SUPERFAMILY SSF50346 2 75 3.53E-12 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BEN31_07585 7322b18087cdec3afe1c22bda7b30bd5 153 Pfam PF01661 Macro domain 19 137 4.3E-12 T 12-10-2018 IPR002589 Macro domain BEN31_07585 7322b18087cdec3afe1c22bda7b30bd5 153 SUPERFAMILY SSF52949 1 152 6.73E-42 T 12-10-2018 BEN31_07585 7322b18087cdec3afe1c22bda7b30bd5 153 Gene3D G3DSA:3.40.220.10 1 153 8.0E-48 T 12-10-2018 BEN31_07585 7322b18087cdec3afe1c22bda7b30bd5 153 SMART SM00506 1 138 9.5E-9 T 12-10-2018 IPR002589 Macro domain BEN31_17060 3e209928ab137c5bb7f9dc561e052b08 205 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 14 201 2.7E-92 T 12-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 BEN31_17060 3e209928ab137c5bb7f9dc561e052b08 205 Pfam PF00510 Cytochrome c oxidase subunit III 25 200 3.7E-16 T 12-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17060 3e209928ab137c5bb7f9dc561e052b08 205 Gene3D G3DSA:1.20.120.80 18 201 2.1E-53 T 12-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_17060 3e209928ab137c5bb7f9dc561e052b08 205 SUPERFAMILY SSF81452 21 200 9.55E-54 T 12-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 BEN31_10100 ed9de6845215610a01dc925e0e2ed5fd 246 Gene3D G3DSA:3.40.50.1820 2 242 5.8E-45 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_10100 ed9de6845215610a01dc925e0e2ed5fd 246 SUPERFAMILY SSF53474 6 237 2.38E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_10100 ed9de6845215610a01dc925e0e2ed5fd 246 Pfam PF00756 Putative esterase 15 237 3.0E-48 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BEN31_02220 756a014ae0d70aa0e378eaa75c69d25e 87 Pfam PF04688 SPP1 phage holin 3 82 6.3E-31 T 12-10-2018 IPR006479 Holin BEN31_02220 756a014ae0d70aa0e378eaa75c69d25e 87 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 4 87 1.0E-32 T 12-10-2018 IPR006479 Holin BEN31_02220 756a014ae0d70aa0e378eaa75c69d25e 87 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 5 85 5.2E-29 T 12-10-2018 IPR006479 Holin BEN31_04180 e971c7581b13673945dd1c1930cec539 382 SUPERFAMILY SSF53383 17 378 1.32E-122 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_04180 e971c7581b13673945dd1c1930cec539 382 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 376 3.5E-163 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_04180 e971c7581b13673945dd1c1930cec539 382 Gene3D G3DSA:3.90.1150.10 246 381 3.0E-57 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_04180 e971c7581b13673945dd1c1930cec539 382 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_04180 e971c7581b13673945dd1c1930cec539 382 Gene3D G3DSA:3.40.640.10 3 245 7.6E-93 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_04180 e971c7581b13673945dd1c1930cec539 382 PIRSF PIRSF001434 1 380 5.3E-150 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_03560 ee104603ef3ccfdaead25929b179a780 353 SMART SM00909 242 333 1.3E-24 T 12-10-2018 IPR019606 GerMN domain BEN31_03560 ee104603ef3ccfdaead25929b179a780 353 SMART SM00909 92 181 4.0E-21 T 12-10-2018 IPR019606 GerMN domain BEN31_03560 ee104603ef3ccfdaead25929b179a780 353 Pfam PF10646 Sporulation and spore germination 69 177 2.7E-20 T 12-10-2018 IPR019606 GerMN domain BEN31_03560 ee104603ef3ccfdaead25929b179a780 353 Pfam PF10646 Sporulation and spore germination 214 327 9.1E-19 T 12-10-2018 IPR019606 GerMN domain BEN31_10765 7082c5ef08b2014a5de64e76ee4f696b 91 SUPERFAMILY SSF52038 1 88 6.02E-29 T 12-10-2018 IPR035905 Barstar-like superfamily BEN31_10765 7082c5ef08b2014a5de64e76ee4f696b 91 Gene3D G3DSA:3.30.370.10 2 91 1.7E-32 T 12-10-2018 IPR035905 Barstar-like superfamily BEN31_10765 7082c5ef08b2014a5de64e76ee4f696b 91 Pfam PF01337 Barstar (barnase inhibitor) 5 84 4.2E-24 T 12-10-2018 IPR000468 Barstar (barnase inhibitor) BEN31_00850 d7089e7fb4bfd010eac9d7ab7f3d15ca 210 Pfam PF04586 Caudovirus prohead serine protease 13 183 1.9E-38 T 12-10-2018 IPR006433 Prohead protease BEN31_00850 d7089e7fb4bfd010eac9d7ab7f3d15ca 210 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 27 177 1.1E-20 T 12-10-2018 IPR006433 Prohead protease BEN31_10090 07c101ef6798d8b367b7f8358cd1903f 392 PIRSF PIRSF001434 1 385 2.4E-145 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_10090 07c101ef6798d8b367b7f8358cd1903f 392 Gene3D G3DSA:3.40.640.10 1 249 2.2E-87 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_10090 07c101ef6798d8b367b7f8358cd1903f 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 381 1.4E-148 T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_10090 07c101ef6798d8b367b7f8358cd1903f 392 SUPERFAMILY SSF53383 23 383 2.5E-110 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_10090 07c101ef6798d8b367b7f8358cd1903f 392 Gene3D G3DSA:3.90.1150.10 250 384 2.1E-47 T 12-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 BEN31_10090 07c101ef6798d8b367b7f8358cd1903f 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 12-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 BEN31_12110 52c3d3fb3b4762ee6095fdb41fb7d6a4 252 PIRSF PIRSF009141 1 251 2.6E-110 T 12-10-2018 IPR008535 Protein of unknown function DUF817 BEN31_12110 52c3d3fb3b4762ee6095fdb41fb7d6a4 252 Pfam PF05675 Protein of unknown function (DUF817) 4 237 2.4E-100 T 12-10-2018 IPR008535 Protein of unknown function DUF817 BEN31_18675 1d393de3d9738e711911fadf3b2be502 192 SUPERFAMILY SSF102405 1 179 9.16E-59 T 12-10-2018 BEN31_18675 1d393de3d9738e711911fadf3b2be502 192 Gene3D G3DSA:3.40.50.450 1 191 2.5E-76 T 12-10-2018 BEN31_18675 1d393de3d9738e711911fadf3b2be502 192 Pfam PF03641 Possible lysine decarboxylase 46 176 2.2E-42 T 12-10-2018 IPR031100 LOG family BEN31_18675 1d393de3d9738e711911fadf3b2be502 192 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 2.6E-73 T 12-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG BEN31_06940 bc04312004a1c59ea77e5c5302f8b3a9 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 12 361 9.7E-48 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_06940 bc04312004a1c59ea77e5c5302f8b3a9 366 Pfam PF03845 Spore germination protein 11 322 1.5E-70 T 12-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 BEN31_07095 ff1f00871a0fbe1afba7ce8deeb79e47 139 SMART SM00347 14 114 6.8E-20 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07095 ff1f00871a0fbe1afba7ce8deeb79e47 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 38 54 6.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07095 ff1f00871a0fbe1afba7ce8deeb79e47 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 70 6.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07095 ff1f00871a0fbe1afba7ce8deeb79e47 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 124 6.6E-5 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_07095 ff1f00871a0fbe1afba7ce8deeb79e47 139 SUPERFAMILY SSF46785 2 131 5.4E-22 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_07095 ff1f00871a0fbe1afba7ce8deeb79e47 139 Gene3D G3DSA:1.10.10.10 1 131 4.2E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07095 ff1f00871a0fbe1afba7ce8deeb79e47 139 Pfam PF01047 MarR family 31 79 9.8E-13 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_18230 deab8f5902932c46ebfbee3d34376342 355 ProSitePatterns PS01348 MraY family signature 2. 150 161 - T 12-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_18230 deab8f5902932c46ebfbee3d34376342 355 Pfam PF00953 Glycosyl transferase family 4 76 230 6.1E-43 T 12-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 BEN31_01175 173d2c5bce629a163088a498e5b2ab57 497 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 496 2.5E-156 T 12-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 BEN31_01175 173d2c5bce629a163088a498e5b2ab57 497 Pfam PF08666 SAF domain 11 82 1.8E-13 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BEN31_01175 173d2c5bce629a163088a498e5b2ab57 497 Gene3D G3DSA:3.90.1210.30 3 85 1.5E-30 T 12-10-2018 BEN31_01175 173d2c5bce629a163088a498e5b2ab57 497 SMART SM00858 11 82 2.8E-14 T 12-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 BEN31_01735 0f3ce53280e1d91cfda8c49dd330af63 135 Pfam PF07997 Protein of unknown function (DUF1694) 4 119 1.1E-37 T 12-10-2018 IPR012543 Protein of unknown function DUF1694 BEN31_01735 0f3ce53280e1d91cfda8c49dd330af63 135 PIRSF PIRSF034303 1 135 1.5E-38 T 12-10-2018 IPR012543 Protein of unknown function DUF1694 BEN31_01735 0f3ce53280e1d91cfda8c49dd330af63 135 Gene3D G3DSA:3.30.1330.30 1 131 7.5E-44 T 12-10-2018 IPR029064 50S ribosomal protein L30e-like BEN31_01735 0f3ce53280e1d91cfda8c49dd330af63 135 SUPERFAMILY SSF160515 4 127 4.05E-39 T 12-10-2018 BEN31_16145 f93fdf71402e5ce4449d49312e4b66f0 202 Gene3D G3DSA:3.40.91.100 33 199 3.8E-12 T 12-10-2018 BEN31_16145 f93fdf71402e5ce4449d49312e4b66f0 202 SUPERFAMILY SSF52980 66 181 6.97E-14 T 12-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BEN31_16145 f93fdf71402e5ce4449d49312e4b66f0 202 Pfam PF04471 Restriction endonuclease 62 177 5.3E-24 T 12-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 BEN31_01660 f6b59b050889a9c8b05f0120c7edcdff 409 Pfam PF13556 PucR C-terminal helix-turn-helix domain 346 403 9.8E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_01660 f6b59b050889a9c8b05f0120c7edcdff 409 Gene3D G3DSA:3.30.450.40 4 156 9.7E-6 T 12-10-2018 IPR029016 GAF-like domain superfamily BEN31_01660 f6b59b050889a9c8b05f0120c7edcdff 409 Gene3D G3DSA:1.10.10.2840 276 408 2.1E-17 T 12-10-2018 BEN31_01660 f6b59b050889a9c8b05f0120c7edcdff 409 SUPERFAMILY SSF55781 15 148 6.73E-6 T 12-10-2018 BEN31_17745 4d4db7b20f5d35a1817b8bb7a5304a4d 169 Pfam PF13420 Acetyltransferase (GNAT) domain 11 161 3.2E-19 T 12-10-2018 BEN31_17745 4d4db7b20f5d35a1817b8bb7a5304a4d 169 SUPERFAMILY SSF55729 11 168 2.62E-30 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_17745 4d4db7b20f5d35a1817b8bb7a5304a4d 169 Gene3D G3DSA:3.40.630.30 4 169 1.0E-45 T 12-10-2018 BEN31_12020 6216873ca568390a0395d7885c26a0ae 272 PIRSF PIRSF035875 1 269 6.3E-80 T 12-10-2018 IPR017039 Virulence factor BrkB BEN31_12020 6216873ca568390a0395d7885c26a0ae 272 Pfam PF03631 Virulence factor BrkB 14 265 3.5E-72 T 12-10-2018 IPR017039 Virulence factor BrkB BEN31_12020 6216873ca568390a0395d7885c26a0ae 272 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 3 264 4.3E-74 T 12-10-2018 IPR017039 Virulence factor BrkB BEN31_12265 1bb191dd966ea4bc13bc7456b61fd9bb 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 23 464 2.4E-88 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BEN31_12265 1bb191dd966ea4bc13bc7456b61fd9bb 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 467 7.0E-80 T 12-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 BEN31_03280 fd2ad99bbf6c534cd984ef5eee252c47 210 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 4 210 3.5E-77 T 12-10-2018 IPR014205 Sporulation protein YtaF BEN31_03280 fd2ad99bbf6c534cd984ef5eee252c47 210 Pfam PF02659 Putative manganese efflux pump 124 208 4.7E-11 T 12-10-2018 IPR003810 Putative manganese efflux pump BEN31_03280 fd2ad99bbf6c534cd984ef5eee252c47 210 Pfam PF02659 Putative manganese efflux pump 4 82 1.9E-10 T 12-10-2018 IPR003810 Putative manganese efflux pump BEN31_05280 c5d3fd13108ffa60df76846ed8750611 317 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 310 1.9E-57 T 12-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal BEN31_05280 c5d3fd13108ffa60df76846ed8750611 317 Pfam PF06081 Aromatic acid exporter family member 1 2 142 2.0E-52 T 12-10-2018 IPR010343 Aromatic acid exporter family member 1 BEN31_05280 c5d3fd13108ffa60df76846ed8750611 317 Gene3D G3DSA:1.20.120.940 141 314 7.6E-54 T 12-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily BEN31_09855 c1621eaa82b9ab3ec0f14f8aa4f9bd27 327 Pfam PF00676 Dehydrogenase E1 component 22 318 6.3E-90 T 12-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 BEN31_09855 c1621eaa82b9ab3ec0f14f8aa4f9bd27 327 Gene3D G3DSA:3.40.50.970 2 327 3.5E-133 T 12-10-2018 BEN31_09855 c1621eaa82b9ab3ec0f14f8aa4f9bd27 327 SUPERFAMILY SSF52518 7 327 5.36E-106 T 12-10-2018 IPR029061 Thiamin diphosphate-binding fold BEN31_01625 cc8765e4d7d6c8bd286e91597dfe648c 214 SUPERFAMILY SSF50685 120 161 8.02E-8 T 12-10-2018 IPR036908 RlpA-like domain superfamily BEN31_01625 cc8765e4d7d6c8bd286e91597dfe648c 214 Pfam PF06725 3D domain 120 181 4.8E-18 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BEN31_12675 2086684baa67e4ee78f6fd3204d7b42f 184 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 118 170 1.4E-6 T 12-10-2018 IPR019264 Domain of unknown function DUF2179 BEN31_12675 2086684baa67e4ee78f6fd3204d7b42f 184 Hamap MF_01515 UPF0316 protein . 10 178 30.589 T 12-10-2018 IPR022930 Protein of unknown function UPF0316 BEN31_06135 f843ab0afa1f4bebfaffa825d2bb2aec 78 Pfam PF17522 Family of unknown function (DUF5446) 2 69 1.7E-24 T 12-10-2018 IPR020252 Protein of unknown function DUF5446 BEN31_06135 f843ab0afa1f4bebfaffa825d2bb2aec 78 SUPERFAMILY SSF58038 10 69 4.19E-5 T 12-10-2018 BEN31_18140 763d9735ca86ecfb27d2403c463127d8 404 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 34 388 1.4E-72 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 BEN31_18140 763d9735ca86ecfb27d2403c463127d8 404 Gene3D G3DSA:3.40.50.12580 204 375 2.6E-67 T 12-10-2018 BEN31_18140 763d9735ca86ecfb27d2403c463127d8 404 SUPERFAMILY SSF53756 58 392 1.41E-15 T 12-10-2018 BEN31_18140 763d9735ca86ecfb27d2403c463127d8 404 Gene3D G3DSA:3.40.50.11820 37 382 2.6E-67 T 12-10-2018 BEN31_07235 6deaab72e5922b846c9f96ab5aee20a4 124 Pfam PF01042 Endoribonuclease L-PSP 10 123 6.4E-27 T 12-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 BEN31_07235 6deaab72e5922b846c9f96ab5aee20a4 124 SUPERFAMILY SSF55298 11 124 1.88E-32 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_07235 6deaab72e5922b846c9f96ab5aee20a4 124 Gene3D G3DSA:3.30.1330.40 4 124 2.1E-33 T 12-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 BEN31_12160 0dea7a7af841748894c502e3e846cbe0 432 TIGRFAM TIGR00784 citMHS: citrate transporter 2 431 2.1E-219 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 BEN31_12160 0dea7a7af841748894c502e3e846cbe0 432 Pfam PF03600 Citrate transporter 13 377 9.3E-41 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BEN31_02870 44f043fcb24ffdfafde9cd81ac308a12 342 Pfam PF13303 Phosphotransferase system, EIIC 18 331 1.3E-99 T 12-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 BEN31_02205 3cad06a66f0ee4776eca7e139e3d8b3d 115 ProDom PD596757 GP16 LIN0124/LIN2378/LIN2564 27 115 4.0E-4 T 12-10-2018 BEN31_05110 81b5437ab73d1a01d9b64e50ed5a3322 223 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 28 217 3.8E-69 T 12-10-2018 IPR014195 Sporulation stage III, protein AG BEN31_07690 2cb7fe17085b0178b419bc25f21b3513 105 Gene3D G3DSA:1.10.3730.20 3 105 3.4E-33 T 12-10-2018 BEN31_07690 2cb7fe17085b0178b419bc25f21b3513 105 Pfam PF00893 Small Multidrug Resistance protein 4 95 4.5E-29 T 12-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 BEN31_07690 2cb7fe17085b0178b419bc25f21b3513 105 SUPERFAMILY SSF103481 6 104 1.96E-19 T 12-10-2018 BEN31_15175 a4f467b1d06da5137bbb08c4dd3da00e 366 Gene3D G3DSA:3.40.50.1010 162 297 2.7E-52 T 12-10-2018 BEN31_15175 a4f467b1d06da5137bbb08c4dd3da00e 366 SUPERFAMILY SSF88723 166 294 4.81E-23 T 12-10-2018 IPR029060 PIN-like domain superfamily BEN31_15175 a4f467b1d06da5137bbb08c4dd3da00e 366 SMART SM00670 166 273 2.1E-14 T 12-10-2018 IPR002716 PIN domain BEN31_09575 979903353e33d2ad8d71b95940c87fd4 204 Pfam PF09335 SNARE associated Golgi protein 32 157 1.2E-21 T 12-10-2018 IPR032816 SNARE associated Golgi protein BEN31_12790 5c13b3276c50fa5c4cb015f02a8fe85e 396 Pfam PF01882 Protein of unknown function DUF58 204 276 3.8E-19 T 12-10-2018 IPR002881 Domain of unknown function DUF58 BEN31_13040 f27bc648fc638ffa690436f3dfdab80a 187 SMART SM00530 11 66 2.2E-16 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_13040 f27bc648fc638ffa690436f3dfdab80a 187 SUPERFAMILY SSF51182 51 184 5.71E-28 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_13040 f27bc648fc638ffa690436f3dfdab80a 187 Pfam PF07883 Cupin domain 110 178 4.8E-12 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BEN31_13040 f27bc648fc638ffa690436f3dfdab80a 187 Gene3D G3DSA:1.10.260.40 2 79 4.4E-20 T 12-10-2018 BEN31_13040 f27bc648fc638ffa690436f3dfdab80a 187 SUPERFAMILY SSF47413 4 72 1.07E-18 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_13040 f27bc648fc638ffa690436f3dfdab80a 187 Pfam PF01381 Helix-turn-helix 13 66 3.6E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_13040 f27bc648fc638ffa690436f3dfdab80a 187 Gene3D G3DSA:2.60.120.10 91 187 3.4E-29 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_04885 077703de4950ded5fcd8c63eb38766f3 374 Pfam PF00246 Zinc carboxypeptidase 93 295 3.1E-25 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BEN31_04885 077703de4950ded5fcd8c63eb38766f3 374 SUPERFAMILY SSF53187 84 372 1.89E-47 T 12-10-2018 BEN31_04885 077703de4950ded5fcd8c63eb38766f3 374 Gene3D G3DSA:3.40.630.10 84 374 1.2E-44 T 12-10-2018 BEN31_04885 077703de4950ded5fcd8c63eb38766f3 374 SMART SM00631 85 366 3.9E-16 T 12-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 BEN31_00570 c235673fb1c0fa01888e8d76028de72f 461 Gene3D G3DSA:1.20.1740.10 1 457 3.4E-69 T 12-10-2018 BEN31_00570 c235673fb1c0fa01888e8d76028de72f 461 Pfam PF00324 Amino acid permease 5 443 7.8E-129 T 12-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 BEN31_00570 c235673fb1c0fa01888e8d76028de72f 461 ProSitePatterns PS00218 Amino acid permeases signature. 30 61 - T 12-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 BEN31_00570 c235673fb1c0fa01888e8d76028de72f 461 PIRSF PIRSF006060 1 458 2.7E-75 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_15460 ff00b1dc5a7434143cc05dbf9b9be5d5 98 Pfam PF04026 SpoVG 2 81 7.6E-35 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 BEN31_15460 ff00b1dc5a7434143cc05dbf9b9be5d5 98 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 27.992 T 12-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 BEN31_15460 ff00b1dc5a7434143cc05dbf9b9be5d5 98 Gene3D G3DSA:3.30.1120.40 1 98 3.6E-39 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 BEN31_15460 ff00b1dc5a7434143cc05dbf9b9be5d5 98 SUPERFAMILY SSF160537 2 84 8.11E-33 T 12-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 BEN31_10710 bb076a1b3d0a769bd1643c1e6bfe250c 279 Gene3D G3DSA:3.30.2010.10 88 166 1.3E-6 T 12-10-2018 BEN31_10710 bb076a1b3d0a769bd1643c1e6bfe250c 279 Pfam PF05569 BlaR1 peptidase M56 108 244 2.4E-12 T 12-10-2018 IPR008756 Peptidase M56 BEN31_11835 421f809de3f5c652eff789e2eb6bfd73 182 Pfam PF04892 VanZ like family 46 174 1.2E-26 T 12-10-2018 IPR006976 VanZ-like BEN31_12075 9ca0486cdf4634c6cc46d10db31a027f 128 Pfam PF09350 Domain of unknown function (DUF1992) 8 73 6.4E-21 T 12-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain BEN31_11670 592afdc56a814fef8bdcb5f346feb6c2 122 TIGRFAM TIGR01881 cas_Cmr5: CRISPR type III-B/RAMP module-associated protein Cmr5 1 73 2.5E-12 T 12-10-2018 IPR010160 CRISPR-associated protein, Cmr5 BEN31_11670 592afdc56a814fef8bdcb5f346feb6c2 122 Gene3D G3DSA:1.10.520.30 2 110 7.7E-23 T 12-10-2018 IPR023101 AF1862-like domain superfamily BEN31_11670 592afdc56a814fef8bdcb5f346feb6c2 122 SUPERFAMILY SSF158568 1 110 1.44E-22 T 12-10-2018 IPR023101 AF1862-like domain superfamily BEN31_11670 592afdc56a814fef8bdcb5f346feb6c2 122 Pfam PF09701 CRISPR-associated protein (Cas_Cmr5) 5 107 3.8E-18 T 12-10-2018 IPR010160 CRISPR-associated protein, Cmr5 BEN31_06915 54654fcef1761158f302b81dbe50cda5 200 Pfam PF09335 SNARE associated Golgi protein 29 154 5.2E-24 T 12-10-2018 IPR032816 SNARE associated Golgi protein BEN31_02225 ab5289f3b58fc1869faf7bc138e065d7 269 Gene3D G3DSA:3.40.80.10 1 154 3.7E-54 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_02225 ab5289f3b58fc1869faf7bc138e065d7 269 SUPERFAMILY SSF55846 1 153 2.75E-46 T 12-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_02225 ab5289f3b58fc1869faf7bc138e065d7 269 Pfam PF01471 Putative peptidoglycan binding domain 202 263 1.9E-18 T 12-10-2018 IPR002477 Peptidoglycan binding-like BEN31_02225 ab5289f3b58fc1869faf7bc138e065d7 269 SMART SM00644 13 153 1.8E-34 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_02225 ab5289f3b58fc1869faf7bc138e065d7 269 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 22 140 3.5E-24 T 12-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BEN31_02225 ab5289f3b58fc1869faf7bc138e065d7 269 Gene3D G3DSA:1.10.101.10 191 269 1.6E-18 T 12-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 BEN31_02225 ab5289f3b58fc1869faf7bc138e065d7 269 SUPERFAMILY SSF47090 194 264 3.66E-17 T 12-10-2018 IPR036365 PGBD-like superfamily BEN31_07460 68c533619fbae980e885e618dc5368a8 180 Pfam PF16800 IseA DL-endopeptidase inhibitor 29 178 8.4E-51 T 12-10-2018 IPR031841 DL-endopeptidase inhibitor IseA BEN31_07460 68c533619fbae980e885e618dc5368a8 180 Gene3D G3DSA:3.10.450.420 25 180 2.5E-54 T 12-10-2018 BEN31_11440 a01a1aafc5b31c639ea022ae98a694fb 646 Gene3D G3DSA:3.40.720.10 237 547 2.6E-79 T 12-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 BEN31_11440 a01a1aafc5b31c639ea022ae98a694fb 646 SUPERFAMILY SSF53649 243 635 1.8E-79 T 12-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 BEN31_11440 a01a1aafc5b31c639ea022ae98a694fb 646 Pfam PF00884 Sulfatase 245 537 1.3E-34 T 12-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 BEN31_11440 a01a1aafc5b31c639ea022ae98a694fb 646 PIRSF PIRSF005091 1 620 6.3E-192 T 12-10-2018 IPR012160 Lipoteichoic acid synthase-like BEN31_14550 c4e63022757e20c5a96fe98288b9760a 160 SUPERFAMILY SSF75169 6 152 1.26E-20 T 12-10-2018 IPR027396 DsrEFH-like BEN31_14550 c4e63022757e20c5a96fe98288b9760a 160 Gene3D G3DSA:3.40.1260.10 2 160 3.1E-64 T 12-10-2018 IPR027396 DsrEFH-like BEN31_14550 c4e63022757e20c5a96fe98288b9760a 160 Pfam PF13686 DsrE/DsrF/DrsH-like family 5 159 1.4E-65 T 12-10-2018 IPR032836 DsrE2-like family BEN31_05095 1116cc1456b19a5994bfadcd1e317590 102 Pfam PF06686 Stage III sporulation protein AC/AD protein family 42 96 1.6E-19 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family BEN31_05095 1116cc1456b19a5994bfadcd1e317590 102 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 2 98 2.7E-38 T 12-10-2018 IPR014211 Stage III sporulation protein AD BEN31_00380 35166d537b99642ea89396c91671c44c 296 Gene3D G3DSA:3.40.50.1980 138 296 2.1E-47 T 12-10-2018 BEN31_00380 35166d537b99642ea89396c91671c44c 296 Gene3D G3DSA:3.40.50.1980 28 137 8.8E-21 T 12-10-2018 BEN31_00380 35166d537b99642ea89396c91671c44c 296 Pfam PF01497 Periplasmic binding protein 89 269 7.2E-24 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_00380 35166d537b99642ea89396c91671c44c 296 SUPERFAMILY SSF53807 28 282 8.63E-42 T 12-10-2018 BEN31_01410 d8170a1afd90fc1c78e97b4c4b640e76 399 Pfam PF04235 Protein of unknown function (DUF418) 223 385 7.4E-45 T 12-10-2018 IPR007349 Domain of unknown function DUF418 BEN31_13620 9446d784204b5a95fb4d2d37afc568f1 211 Pfam PF02525 Flavodoxin-like fold 3 206 5.0E-48 T 12-10-2018 IPR003680 Flavodoxin-like fold BEN31_13620 9446d784204b5a95fb4d2d37afc568f1 211 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 29.061 T 12-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 BEN31_13620 9446d784204b5a95fb4d2d37afc568f1 211 SUPERFAMILY SSF52218 1 210 1.56E-54 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_13620 9446d784204b5a95fb4d2d37afc568f1 211 Gene3D G3DSA:3.40.50.360 1 211 1.2E-62 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_12715 a12de86411c6a64e8193628db1a4e4ba 150 SMART SM00850 49 146 8.5E-23 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN31_12715 a12de86411c6a64e8193628db1a4e4ba 150 Pfam PF04397 LytTr DNA-binding domain 51 145 1.3E-22 T 12-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 BEN31_12715 a12de86411c6a64e8193628db1a4e4ba 150 Gene3D G3DSA:2.40.50.1020 34 149 2.3E-12 T 12-10-2018 BEN31_00730 0d619fd18567fdaf560339b3d30a87a6 132 SMART SM00530 9 64 1.4E-15 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00730 0d619fd18567fdaf560339b3d30a87a6 132 Gene3D G3DSA:1.10.260.40 5 130 4.4E-19 T 12-10-2018 BEN31_00730 0d619fd18567fdaf560339b3d30a87a6 132 Pfam PF01381 Helix-turn-helix 10 64 4.3E-17 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_00730 0d619fd18567fdaf560339b3d30a87a6 132 SUPERFAMILY SSF47413 4 69 6.17E-17 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_14515 59b83ee69d6711d3f534418d6b318f33 390 Pfam PF07690 Major Facilitator Superfamily 9 315 1.4E-40 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_14515 59b83ee69d6711d3f534418d6b318f33 390 SUPERFAMILY SSF103473 3 378 6.02E-59 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_14515 59b83ee69d6711d3f534418d6b318f33 390 Gene3D G3DSA:1.20.1250.20 196 381 1.1E-17 T 12-10-2018 BEN31_14515 59b83ee69d6711d3f534418d6b318f33 390 Gene3D G3DSA:1.20.1250.20 3 190 1.2E-29 T 12-10-2018 BEN31_02290 60cc239e0c2e39a98326e9a680f75b02 191 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 10 185 9.7E-59 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 BEN31_02290 60cc239e0c2e39a98326e9a680f75b02 191 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 187 3.5E-49 T 12-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 BEN31_02290 60cc239e0c2e39a98326e9a680f75b02 191 Gene3D G3DSA:1.10.1760.20 4 189 5.4E-53 T 12-10-2018 BEN31_08520 abae890f423f02a433aee2679f6504e0 212 Pfam PF00156 Phosphoribosyl transferase domain 44 172 4.9E-22 T 12-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 BEN31_08520 abae890f423f02a433aee2679f6504e0 212 Gene3D G3DSA:3.40.50.2020 1 211 2.0E-63 T 12-10-2018 BEN31_08520 abae890f423f02a433aee2679f6504e0 212 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 7 177 3.6E-51 T 12-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08520 abae890f423f02a433aee2679f6504e0 212 SUPERFAMILY SSF53271 7 205 1.7E-54 T 12-10-2018 IPR029057 Phosphoribosyltransferase-like BEN31_08520 abae890f423f02a433aee2679f6504e0 212 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 212 29.851 T 12-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 BEN31_08115 b7df64449e2153866ac3bc2722656505 259 Pfam PF01311 Bacterial export proteins, family 1 8 243 9.2E-72 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN31_08115 b7df64449e2153866ac3bc2722656505 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 16 37 2.4E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN31_08115 b7df64449e2153866ac3bc2722656505 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 74 93 2.4E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN31_08115 b7df64449e2153866ac3bc2722656505 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 2.4E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN31_08115 b7df64449e2153866ac3bc2722656505 259 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 2.4E-29 T 12-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 BEN31_08115 b7df64449e2153866ac3bc2722656505 259 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 9 252 1.0E-66 T 12-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 BEN31_06905 2754e498638565eb0666492e4a7ad454 206 Pfam PF01184 GPR1/FUN34/yaaH family 11 188 5.2E-25 T 12-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 BEN31_13995 2273ca011fe1417b4bf6347713b8e119 410 Gene3D G3DSA:1.10.10.2840 277 410 1.2E-14 T 12-10-2018 BEN31_13995 2273ca011fe1417b4bf6347713b8e119 410 Pfam PF13556 PucR C-terminal helix-turn-helix domain 348 403 6.4E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_06635 10fa4155b6497252f88d8365768b5a64 112 Gene3D G3DSA:2.30.29.50 5 112 3.7E-28 T 12-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily BEN31_06635 10fa4155b6497252f88d8365768b5a64 112 Pfam PF08000 Bacterial PH domain 8 110 1.2E-23 T 12-10-2018 IPR012544 Bacterial Pleckstrin homology domain BEN31_06635 10fa4155b6497252f88d8365768b5a64 112 SUPERFAMILY SSF50729 9 111 2.64E-27 T 12-10-2018 BEN31_00490 390574c3bf62fd07058c0d53f8a219b2 340 Pfam PF04230 Polysaccharide pyruvyl transferase 50 291 3.9E-25 T 12-10-2018 IPR007345 Polysaccharide pyruvyl transferase BEN31_08470 99b36d76d26c90999a53b6bc8f9e4525 291 Pfam PF03755 YicC-like family, N-terminal region 2 156 2.0E-37 T 12-10-2018 IPR013527 YicC-like, N-terminal BEN31_08470 99b36d76d26c90999a53b6bc8f9e4525 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 291 2.5E-108 T 12-10-2018 IPR005229 Conserved hypothetical protein CHP00255 BEN31_08470 99b36d76d26c90999a53b6bc8f9e4525 291 Pfam PF08340 Domain of unknown function (DUF1732) 207 291 1.6E-37 T 12-10-2018 IPR013551 Domain of unknown function DUF1732 BEN31_07530 67e39913ede8f45f3c0b7bfff18d0101 156 Gene3D G3DSA:3.10.180.10 5 147 1.9E-25 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_07530 67e39913ede8f45f3c0b7bfff18d0101 156 SUPERFAMILY SSF54593 1 143 8.99E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_06690 a59666cf9455b5b716b2463f9167cf47 220 SUPERFAMILY SSF53955 53 164 2.56E-10 T 12-10-2018 IPR023346 Lysozyme-like domain superfamily BEN31_06690 a59666cf9455b5b716b2463f9167cf47 220 Gene3D G3DSA:1.10.530.10 47 202 2.4E-49 T 12-10-2018 BEN31_06690 a59666cf9455b5b716b2463f9167cf47 220 Pfam PF13702 Lysozyme-like 49 202 3.8E-59 T 12-10-2018 BEN31_12215 83f18dd80d57007d7695dcea8f4e880b 129 Pfam PF11486 Protein of unknown function (DUF3212) 1 118 2.0E-64 T 12-10-2018 IPR021579 Protein of unknown function DUF3212 BEN31_12215 83f18dd80d57007d7695dcea8f4e880b 129 Gene3D G3DSA:1.10.8.570 1 112 2.4E-42 T 12-10-2018 IPR038074 YfmB domain superfamily BEN31_12215 83f18dd80d57007d7695dcea8f4e880b 129 SUPERFAMILY SSF140688 1 111 1.83E-55 T 12-10-2018 IPR038074 YfmB domain superfamily BEN31_16085 41651924c125ef8d53e820d291bd5c9b 287 Gene3D G3DSA:3.30.310.160 70 195 3.9E-66 T 12-10-2018 BEN31_16085 41651924c125ef8d53e820d291bd5c9b 287 Gene3D G3DSA:3.10.450.660 47 272 3.9E-66 T 12-10-2018 BEN31_16085 41651924c125ef8d53e820d291bd5c9b 287 Pfam PF09648 YycH protein 38 270 1.8E-53 T 12-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 BEN31_17990 c6f0205125025f413ab461ab50c8e193 381 Gene3D G3DSA:3.30.300.210 223 374 1.7E-45 T 12-10-2018 IPR038501 Spore germination GerAC superfamily BEN31_17990 c6f0205125025f413ab461ab50c8e193 381 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 6 372 1.8E-89 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_17990 c6f0205125025f413ab461ab50c8e193 381 Gene3D G3DSA:3.10.450.290 27 93 7.6E-33 T 12-10-2018 BEN31_17990 c6f0205125025f413ab461ab50c8e193 381 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 205 371 3.1E-33 T 12-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 BEN31_17535 62735d7fafe9eb23bec51a915e4de52f 183 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 1 181 20.022 T 12-10-2018 IPR023522 Chromosome-anchoring protein RacA BEN31_17535 62735d7fafe9eb23bec51a915e4de52f 183 SUPERFAMILY SSF46955 2 103 1.97E-10 T 12-10-2018 IPR009061 Putative DNA-binding domain superfamily BEN31_17535 62735d7fafe9eb23bec51a915e4de52f 183 Pfam PF13411 MerR HTH family regulatory protein 3 64 8.0E-13 T 12-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 BEN31_17535 62735d7fafe9eb23bec51a915e4de52f 183 Gene3D G3DSA:1.10.1660.10 1 66 4.0E-21 T 12-10-2018 BEN31_16680 6d26d9192b9cbd1aee0a825eec667e41 87 ProDom PD061728 YWQI YWQIA COIL COILED 4 85 3.0E-18 T 12-10-2018 IPR020299 Uncharacterised protein family YwqI BEN31_16680 6d26d9192b9cbd1aee0a825eec667e41 87 Pfam PF17279 Family of unknown function (DUF5344) 1 86 2.2E-25 T 12-10-2018 BEN31_08080 3e96aa60f1384f33c2408908d4a04ef3 153 SUPERFAMILY SSF50341 10 145 6.02E-34 T 12-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 BEN31_08080 3e96aa60f1384f33c2408908d4a04ef3 153 SMART SM00260 6 143 2.0E-36 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_08080 3e96aa60f1384f33c2408908d4a04ef3 153 Gene3D G3DSA:2.30.30.40 12 137 2.7E-36 T 12-10-2018 BEN31_08080 3e96aa60f1384f33c2408908d4a04ef3 153 Pfam PF01584 CheW-like domain 11 145 4.2E-30 T 12-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 BEN31_08080 3e96aa60f1384f33c2408908d4a04ef3 153 Gene3D G3DSA:2.40.50.180 29 95 2.7E-36 T 12-10-2018 BEN31_04900 b2d5384af1d2cf1220b75eeb523c19e4 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 57 4.0E-19 T 12-10-2018 IPR024490 Protein of unknown function DUF2759 BEN31_04900 b2d5384af1d2cf1220b75eeb523c19e4 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 56 1.7E-25 T 12-10-2018 IPR024490 Protein of unknown function DUF2759 BEN31_14525 35dcb4569c5b0e8b194c213acfa5d517 258 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 1.4E-40 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BEN31_12260 9f933ceaf605ba6fed14dde96b5a62b7 463 Gene3D G3DSA:1.20.1740.10 20 462 3.8E-131 T 12-10-2018 BEN31_12260 9f933ceaf605ba6fed14dde96b5a62b7 463 PIRSF PIRSF006060 11 462 4.6E-90 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_12260 9f933ceaf605ba6fed14dde96b5a62b7 463 Pfam PF13520 Amino acid permease 26 432 1.8E-61 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_02830 52fbf0f855eaaaf57b1b5f6e21f8bdca 270 SUPERFAMILY SSF56112 6 234 2.35E-33 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_02830 52fbf0f855eaaaf57b1b5f6e21f8bdca 270 Gene3D G3DSA:3.90.1200.10 83 268 2.4E-24 T 12-10-2018 BEN31_02830 52fbf0f855eaaaf57b1b5f6e21f8bdca 270 Pfam PF01636 Phosphotransferase enzyme family 21 232 3.2E-23 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BEN31_16015 a9d334f4130f4cd1745ccc71ab738fb9 137 SUPERFAMILY SSF54593 12 130 2.01E-20 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_16015 a9d334f4130f4cd1745ccc71ab738fb9 137 Gene3D G3DSA:3.10.180.10 1 136 2.4E-52 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_16015 a9d334f4130f4cd1745ccc71ab738fb9 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 126 1.4E-7 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_10825 961fdbd330debe663903cb78934e8987 427 Gene3D G3DSA:3.30.2010.10 205 287 2.6E-27 T 12-10-2018 BEN31_10825 961fdbd330debe663903cb78934e8987 427 Pfam PF01435 Peptidase family M48 209 416 2.4E-37 T 12-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 BEN31_10825 961fdbd330debe663903cb78934e8987 427 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 33 205 2.6E-17 T 12-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 BEN31_13070 0eca403ff942000e5b79ff50de088956 131 SUPERFAMILY SSF54593 1 121 1.65E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_13070 0eca403ff942000e5b79ff50de088956 131 Gene3D G3DSA:3.10.180.10 6 128 2.1E-37 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_13070 0eca403ff942000e5b79ff50de088956 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 121 2.7E-9 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_13070 0eca403ff942000e5b79ff50de088956 131 ProSitePatterns PS00934 Glyoxalase I signature 1. 7 28 - T 12-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 BEN31_12775 4cff458a69e7a1a3b75128563febf895 160 Pfam PF04073 Aminoacyl-tRNA editing domain 27 141 4.5E-27 T 12-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 BEN31_12775 4cff458a69e7a1a3b75128563febf895 160 Gene3D G3DSA:3.90.960.10 1 158 2.2E-40 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN31_12775 4cff458a69e7a1a3b75128563febf895 160 SUPERFAMILY SSF55826 5 143 1.83E-35 T 12-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 BEN31_04130 87c45c4707c3c25f211a85c339c9371a 309 Pfam PF01136 Peptidase family U32 77 306 2.8E-63 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BEN31_11965 f1d44e5048105f21ff82b7e169f09916 133 Gene3D G3DSA:3.10.450.50 2 125 4.8E-7 T 12-10-2018 BEN31_11965 f1d44e5048105f21ff82b7e169f09916 133 SUPERFAMILY SSF54427 5 113 6.49E-10 T 12-10-2018 IPR032710 NTF2-like domain superfamily BEN31_16730 a158edf1e808ae119eb204030a6422d4 285 Gene3D G3DSA:3.20.20.370 60 281 2.3E-66 T 12-10-2018 BEN31_16730 a158edf1e808ae119eb204030a6422d4 285 Pfam PF01522 Polysaccharide deacetylase 121 245 3.9E-34 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_16730 a158edf1e808ae119eb204030a6422d4 285 SUPERFAMILY SSF88713 84 266 1.31E-44 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_13395 13164821ce6ae1fc55c79159a4ffdc29 230 Gene3D G3DSA:3.40.50.1820 3 228 5.8E-49 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13395 13164821ce6ae1fc55c79159a4ffdc29 230 SUPERFAMILY SSF53474 5 228 6.25E-36 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_13395 13164821ce6ae1fc55c79159a4ffdc29 230 Pfam PF12146 Serine aminopeptidase, S33 5 213 9.1E-17 T 12-10-2018 IPR022742 Serine aminopeptidase, S33 BEN31_13395 13164821ce6ae1fc55c79159a4ffdc29 230 PIRSF PIRSF017388 1 230 2.9E-52 T 12-10-2018 IPR012354 Esterase/lipase GO:0052689 BEN31_05080 f91375034a632fea9d5e114d1b3cf431 307 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 292 1.8E-122 T 12-10-2018 IPR014217 Sporulation stage III, protein AA BEN31_05080 f91375034a632fea9d5e114d1b3cf431 307 SMART SM00382 135 272 6.7E-5 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_05080 f91375034a632fea9d5e114d1b3cf431 307 Gene3D G3DSA:3.40.50.300 117 265 1.5E-23 T 12-10-2018 BEN31_05080 f91375034a632fea9d5e114d1b3cf431 307 SUPERFAMILY SSF52540 44 260 4.0E-21 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_03570 4d8379538e39d441e3aa70f2dcfbf85c 197 Pfam PF01725 Ham1 family 5 190 9.4E-61 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BEN31_03570 4d8379538e39d441e3aa70f2dcfbf85c 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 193 1.9E-66 T 12-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 BEN31_03570 4d8379538e39d441e3aa70f2dcfbf85c 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 49.113 T 12-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 BEN31_03570 4d8379538e39d441e3aa70f2dcfbf85c 197 Gene3D G3DSA:3.90.950.10 1 197 1.5E-77 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN31_03570 4d8379538e39d441e3aa70f2dcfbf85c 197 SUPERFAMILY SSF52972 2 193 3.92E-70 T 12-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like BEN31_13315 1e1a6db08b5214e6aefef7cd3fad76dc 162 Pfam PF13581 Histidine kinase-like ATPase domain 12 143 8.7E-28 T 12-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase BEN31_13315 1e1a6db08b5214e6aefef7cd3fad76dc 162 Gene3D G3DSA:3.30.565.10 5 156 3.6E-26 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13315 1e1a6db08b5214e6aefef7cd3fad76dc 162 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 158 39.122 T 12-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BEN31_13315 1e1a6db08b5214e6aefef7cd3fad76dc 162 SUPERFAMILY SSF55874 31 137 1.7E-14 T 12-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily BEN31_13315 1e1a6db08b5214e6aefef7cd3fad76dc 162 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 161 1.9E-78 T 12-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 BEN31_11635 28ba2cc4e211509c9efb0b2863cfe8cd 86 Pfam PF14182 YgaB-like protein 3 79 2.6E-30 T 12-10-2018 IPR025572 YgaB-like protein BEN31_03870 e66b504ab74755f9791b86553c3444bf 369 Gene3D G3DSA:3.40.50.10800 113 366 2.0E-81 T 12-10-2018 BEN31_03870 e66b504ab74755f9791b86553c3444bf 369 Gene3D G3DSA:3.40.50.10800 34 349 2.0E-81 T 12-10-2018 BEN31_03870 e66b504ab74755f9791b86553c3444bf 369 Hamap MF_00569 Quinolinate synthase A [nadA]. 23 368 55.296 T 12-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BEN31_03870 e66b504ab74755f9791b86553c3444bf 369 Gene3D G3DSA:3.40.50.10800 231 319 2.0E-81 T 12-10-2018 BEN31_03870 e66b504ab74755f9791b86553c3444bf 369 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 23 368 1.7E-120 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BEN31_03870 e66b504ab74755f9791b86553c3444bf 369 SUPERFAMILY SSF142754 38 367 3.14E-95 T 12-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BEN31_03870 e66b504ab74755f9791b86553c3444bf 369 Pfam PF02445 Quinolinate synthetase A protein 31 367 1.3E-104 T 12-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 BEN31_08915 f31c55b49036f5164b44c65478a627fc 93 Gene3D G3DSA:1.10.287.750 5 93 1.8E-37 T 12-10-2018 IPR036270 UPF0358 superfamily BEN31_08915 f31c55b49036f5164b44c65478a627fc 93 SUPERFAMILY SSF140404 7 84 2.35E-36 T 12-10-2018 IPR036270 UPF0358 superfamily BEN31_08915 f31c55b49036f5164b44c65478a627fc 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 91 1.1E-41 T 12-10-2018 IPR009983 Uncharacterised protein family UPF0358 BEN31_08915 f31c55b49036f5164b44c65478a627fc 93 Hamap MF_01560 UPF0358 protein . 3 93 27.02 T 12-10-2018 IPR009983 Uncharacterised protein family UPF0358 BEN31_08560 f6b8e2f451c2bb642435d702282d0cee 442 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 418 4.1E-133 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BEN31_08560 f6b8e2f451c2bb642435d702282d0cee 442 Pfam PF00860 Permease family 19 393 3.3E-108 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BEN31_08560 f6b8e2f451c2bb642435d702282d0cee 442 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 340 360 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BEN31_09455 5748003f8323d5d0e117e8a9dc4f3d70 264 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 217 1.7E-26 T 12-10-2018 IPR002898 MotA/TolQ/ExbB proton channel BEN31_09455 5748003f8323d5d0e117e8a9dc4f3d70 264 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 12-10-2018 IPR000540 Flagellar motor protein MotA, conserved site BEN31_16880 5a4e53fbacce7fec9f210ced186d00bb 108 Gene3D G3DSA:1.20.58.280 1 104 7.1E-42 T 12-10-2018 BEN31_16880 5a4e53fbacce7fec9f210ced186d00bb 108 PIRSF PIRSF000699 1 104 1.6E-41 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BEN31_16880 5a4e53fbacce7fec9f210ced186d00bb 108 SUPERFAMILY SSF46973 1 99 2.09E-38 T 12-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 BEN31_16880 5a4e53fbacce7fec9f210ced186d00bb 108 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 5 98 2.5E-38 T 12-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 BEN31_18105 02890e54b4cf3304f8acf412c21df5d6 275 Pfam PF01061 ABC-2 type transporter 18 233 1.5E-26 T 12-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 BEN31_15370 d3587a5bcbbd8ed543e11f7e90cf6f7d 245 Pfam PF00092 von Willebrand factor type A domain 1 78 4.7E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_15370 d3587a5bcbbd8ed543e11f7e90cf6f7d 245 Gene3D G3DSA:3.40.50.410 1 240 7.1E-57 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_15370 d3587a5bcbbd8ed543e11f7e90cf6f7d 245 SUPERFAMILY SSF53300 2 76 2.67E-10 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_15370 d3587a5bcbbd8ed543e11f7e90cf6f7d 245 Pfam PF13519 von Willebrand factor type A domain 135 227 5.8E-7 T 12-10-2018 IPR002035 von Willebrand factor, type A BEN31_15370 d3587a5bcbbd8ed543e11f7e90cf6f7d 245 SUPERFAMILY SSF53300 133 227 1.19E-11 T 12-10-2018 IPR036465 von Willebrand factor A-like domain superfamily BEN31_15480 02ef768737921e140d53a6f183ae1072 61 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 10 54 7.7E-8 T 12-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 BEN31_15480 02ef768737921e140d53a6f183ae1072 61 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 13 22 - T 12-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 BEN31_15480 02ef768737921e140d53a6f183ae1072 61 Gene3D G3DSA:1.10.8.910 7 61 9.4E-6 T 12-10-2018 IPR038300 SASP, alpha/beta-type superfamily BEN31_09250 23be074e64f6c4c6e440d5386fe4d599 80 Gene3D G3DSA:3.30.720.20 1 80 1.4E-36 T 12-10-2018 IPR038073 YkuJ-like superfamily BEN31_09250 23be074e64f6c4c6e440d5386fe4d599 80 SUPERFAMILY SSF143567 2 79 2.88E-28 T 12-10-2018 IPR038073 YkuJ-like superfamily BEN31_09250 23be074e64f6c4c6e440d5386fe4d599 80 Pfam PF08796 Protein of unknown function (DUF1797) 7 78 1.4E-25 T 12-10-2018 IPR014904 Protein of unknown function DUF1797 BEN31_09250 23be074e64f6c4c6e440d5386fe4d599 80 PIRSF PIRSF037356 1 79 5.0E-35 T 12-10-2018 IPR014904 Protein of unknown function DUF1797 BEN31_01790 5204d9e0480e085315c5f011791870b9 93 PIRSF PIRSF028784 1 91 9.0E-34 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BEN31_01790 5204d9e0480e085315c5f011791870b9 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 30 82 4.2E-19 T 12-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 BEN31_05455 bb7e12a646f94b40b922f3774ae92107 235 Gene3D G3DSA:2.40.40.10 29 135 7.8E-26 T 12-10-2018 IPR036908 RlpA-like domain superfamily BEN31_05455 bb7e12a646f94b40b922f3774ae92107 235 SUPERFAMILY SSF49590 139 209 4.71E-12 T 12-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily BEN31_05455 bb7e12a646f94b40b922f3774ae92107 235 SUPERFAMILY SSF50685 24 140 1.5E-17 T 12-10-2018 IPR036908 RlpA-like domain superfamily BEN31_05455 bb7e12a646f94b40b922f3774ae92107 235 Pfam PF03330 Lytic transglycolase 80 130 2.7E-6 T 12-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain BEN31_05455 bb7e12a646f94b40b922f3774ae92107 235 Gene3D G3DSA:2.60.40.760 136 229 2.3E-31 T 12-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily BEN31_18760 31456554ee1cf98c8c585ef4433d6aa4 89 Gene3D G3DSA:1.25.40.10 1 89 3.3E-10 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_17975 f06835fcee8c20db8dfd95a0baf67feb 321 Gene3D G3DSA:1.10.260.150 59 321 5.6E-82 T 12-10-2018 BEN31_17975 f06835fcee8c20db8dfd95a0baf67feb 321 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 92 241 5.7E-35 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_17975 f06835fcee8c20db8dfd95a0baf67feb 321 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 93 241 1.0E-40 T 12-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 4 479 50.32 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 476 1.5E-165 T 12-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 ProSitePatterns PS00455 Putative AMP-binding domain signature. 148 159 - T 12-10-2018 IPR020845 AMP-binding, conserved site BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 Pfam PF00501 AMP-binding enzyme 12 388 2.6E-93 T 12-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 Pfam PF13193 AMP-binding enzyme C-terminal domain 397 470 1.6E-18 T 12-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 Gene3D G3DSA:3.30.300.310 386 481 5.5E-32 T 12-10-2018 BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 SUPERFAMILY SSF56801 5 477 1.7E-137 T 12-10-2018 BEN31_02450 bc3d4eb227dfe61da5f868051b03e36a 483 Gene3D G3DSA:3.40.50.12780 1 385 8.1E-132 T 12-10-2018 BEN31_14110 f9505ab175e9cda2d51aae2d77c6abce 540 Pfam PF02652 L-lactate permease 14 535 2.5E-193 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BEN31_14110 f9505ab175e9cda2d51aae2d77c6abce 540 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 537 4.6E-193 T 12-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 BEN31_07660 c6a483dfc09b77049c802ba88de8dfdc 107 Pfam PF14157 YmzC-like protein 43 95 5.3E-24 T 12-10-2018 IPR025448 YmzC-like protein BEN31_15830 93c2c5e70b736c3ba5a15719d6908122 208 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 43 181 1.3E-68 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 BEN31_15830 93c2c5e70b736c3ba5a15719d6908122 208 SUPERFAMILY SSF53163 3 194 4.97E-58 T 12-10-2018 IPR023430 Peptidase HybD-like domain superfamily BEN31_15830 93c2c5e70b736c3ba5a15719d6908122 208 Pfam PF06866 Protein of unknown function (DUF1256) 17 179 1.2E-67 T 12-10-2018 IPR009665 Protein of unknown function DUF1256 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 Gene3D G3DSA:1.10.240.10 185 295 9.1E-137 T 12-10-2018 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 141 162 8.8E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 8.8E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 8.8E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 8.8E-29 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 12-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 Pfam PF00579 tRNA synthetases class I (W and Y) 5 282 1.2E-80 T 12-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 326 1.0E-121 T 12-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 SUPERFAMILY SSF52374 5 326 3.14E-96 T 12-10-2018 BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 Gene3D G3DSA:3.40.50.620 6 325 9.1E-137 T 12-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold BEN31_10330 f2bf85fc3a6fe6a608491f8b430e2b11 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 327 42.005 T 12-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 BEN31_10945 24eb40c8484fed82c0a1cdf9e5cb094e 118 Pfam PF12732 YtxH-like protein 8 72 6.5E-11 T 12-10-2018 IPR024623 Uncharacterised protein family YtxH BEN31_10945 24eb40c8484fed82c0a1cdf9e5cb094e 118 SUPERFAMILY SSF47162 44 111 3.53E-6 T 12-10-2018 BEN31_10945 24eb40c8484fed82c0a1cdf9e5cb094e 118 Gene3D G3DSA:1.20.120.20 27 118 6.6E-6 T 12-10-2018 BEN31_13615 69d769df5b037ef7e9d35abd1ac0b784 210 SUPERFAMILY SSF52266 4 206 4.65E-32 T 12-10-2018 BEN31_13615 69d769df5b037ef7e9d35abd1ac0b784 210 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 8 197 4.7E-24 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN31_13615 69d769df5b037ef7e9d35abd1ac0b784 210 Gene3D G3DSA:3.40.50.1110 4 207 2.7E-30 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 SUPERFAMILY SSF141868 3 199 2.22E-30 T 12-10-2018 IPR035919 EAL domain superfamily BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 Gene3D G3DSA:1.10.3210.10 202 366 4.4E-25 T 12-10-2018 BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 Pfam PF08668 HDOD domain 209 337 3.5E-18 T 12-10-2018 IPR013976 Metal-dependent hydrolase HDOD BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 PIRSF PIRSF003180 1 408 4.2E-141 T 12-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 SUPERFAMILY SSF109604 187 405 6.91E-40 T 12-10-2018 BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 SMART SM00052 1 203 6.0E-5 T 12-10-2018 IPR001633 EAL domain BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 Pfam PF00563 EAL domain 47 196 1.5E-14 T 12-10-2018 IPR001633 EAL domain BEN31_01750 7fb71412c8072b3abcaaab1a90efe7c4 408 Gene3D G3DSA:3.20.20.450 2 201 9.5E-20 T 12-10-2018 IPR035919 EAL domain superfamily BEN31_04210 c69c32bd869629762add8b67fa021719 250 SUPERFAMILY SSF51735 5 243 2.5E-72 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_04210 c69c32bd869629762add8b67fa021719 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 3.9E-64 T 12-10-2018 BEN31_04210 c69c32bd869629762add8b67fa021719 250 Gene3D G3DSA:3.40.50.720 1 248 1.6E-73 T 12-10-2018 BEN31_04210 c69c32bd869629762add8b67fa021719 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 12-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 5.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.3E-31 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.0E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 8.0E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_04210 c69c32bd869629762add8b67fa021719 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.0E-13 T 12-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR BEN31_06215 895ed5ddfe956d208635fefb6d73e1de 439 TIGRFAM TIGR03173 pbuX: xanthine permease 12 417 4.0E-165 T 12-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 BEN31_06215 895ed5ddfe956d208635fefb6d73e1de 439 Pfam PF00860 Permease family 8 386 3.0E-121 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BEN31_06215 895ed5ddfe956d208635fefb6d73e1de 439 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 333 353 - T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BEN31_06215 895ed5ddfe956d208635fefb6d73e1de 439 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 6 416 1.8E-144 T 12-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 BEN31_06225 6786a9ddeb54012169180f25c90b1a5f 169 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 74 164 1.5E-29 T 12-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 BEN31_06225 6786a9ddeb54012169180f25c90b1a5f 169 Gene3D G3DSA:1.20.120.1630 1 167 6.0E-17 T 12-10-2018 BEN31_14400 be67ddbd8ace6c38119a6bdf74e69da8 160 Gene3D G3DSA:2.60.40.10 56 149 2.1E-6 T 12-10-2018 IPR013783 Immunoglobulin-like fold BEN31_14400 be67ddbd8ace6c38119a6bdf74e69da8 160 SUPERFAMILY SSF49373 59 112 1.88E-5 T 12-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments BEN31_18630 e670104558d530bfacc5c5ff3724f2d7 319 Gene3D G3DSA:3.40.50.12300 3 319 6.8E-132 T 12-10-2018 IPR038136 Gluconeogenesis factor superfamily BEN31_18630 e670104558d530bfacc5c5ff3724f2d7 319 Pfam PF01933 Uncharacterised protein family UPF0052 7 290 2.2E-109 T 12-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 BEN31_18630 e670104558d530bfacc5c5ff3724f2d7 319 Hamap MF_00973 Gluconeogenesis factor. 3 317 36.492 T 12-10-2018 IPR010119 Gluconeogenesis factor BEN31_18630 e670104558d530bfacc5c5ff3724f2d7 319 SUPERFAMILY SSF142338 5 312 5.23E-110 T 12-10-2018 BEN31_18630 e670104558d530bfacc5c5ff3724f2d7 319 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 7 315 3.5E-129 T 12-10-2018 IPR010119 Gluconeogenesis factor BEN31_05050 1f77f3f80a0579966057cfe76a231e11 318 Pfam PF07136 Protein of unknown function (DUF1385) 57 300 9.5E-81 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 BEN31_05050 1f77f3f80a0579966057cfe76a231e11 318 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 57 295 4.0E-115 T 12-10-2018 IPR010787 Protein of unknown function DUF1385 BEN31_11675 fe23d793a275adf3d2dddf1d542b7dfb 296 TIGRFAM TIGR02580 cas_RAMP_Cmr4: CRISPR type III-B/RAMP module RAMP protein Cmr4 14 286 3.1E-75 T 12-10-2018 IPR013410 CRISPR-associated RAMP Cmr4 BEN31_11675 fe23d793a275adf3d2dddf1d542b7dfb 296 Pfam PF03787 RAMP superfamily 15 287 4.5E-29 T 12-10-2018 IPR005537 CRISPR type III-associated RAMP protein BEN31_02580 b03f3c23a61fba8e276ea34b3c8182bf 264 Gene3D G3DSA:3.40.50.1820 19 260 3.2E-44 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_02580 b03f3c23a61fba8e276ea34b3c8182bf 264 SUPERFAMILY SSF53474 9 255 1.49E-48 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_02580 b03f3c23a61fba8e276ea34b3c8182bf 264 Pfam PF00326 Prolyl oligopeptidase family 64 255 6.0E-24 T 12-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 BEN31_02580 b03f3c23a61fba8e276ea34b3c8182bf 264 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 97 127 - T 12-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 BEN31_17955 6cb7fcf048a42d51a298b545e287675e 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 3.8E-49 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BEN31_17955 6cb7fcf048a42d51a298b545e287675e 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 3.8E-49 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BEN31_17955 6cb7fcf048a42d51a298b545e287675e 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 3.8E-49 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BEN31_17955 6cb7fcf048a42d51a298b545e287675e 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 88 101 3.8E-49 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BEN31_17955 6cb7fcf048a42d51a298b545e287675e 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 3.8E-49 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BEN31_17955 6cb7fcf048a42d51a298b545e287675e 149 Pfam PF14102 Capsule biosynthesis CapC 12 128 1.1E-40 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BEN31_17955 6cb7fcf048a42d51a298b545e287675e 149 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 10 139 1.6E-45 T 12-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 BEN31_02285 f387938440a91824d230d471ced2b71a 184 Pfam PF00583 Acetyltransferase (GNAT) family 38 136 2.5E-10 T 12-10-2018 IPR000182 GNAT domain BEN31_02285 f387938440a91824d230d471ced2b71a 184 Gene3D G3DSA:3.40.630.30 1 166 8.6E-34 T 12-10-2018 BEN31_02285 f387938440a91824d230d471ced2b71a 184 SUPERFAMILY SSF55729 1 136 3.12E-20 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_00425 4e78cd30b18b74dcd382b1bd1075cd8e 328 Gene3D G3DSA:1.10.3470.10 2 326 1.3E-93 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_00425 4e78cd30b18b74dcd382b1bd1075cd8e 328 SUPERFAMILY SSF81345 3 322 8.5E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_00425 4e78cd30b18b74dcd382b1bd1075cd8e 328 Pfam PF01032 FecCD transport family 14 322 8.0E-92 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_07205 81deae7b48bb729d9a4ef58b191bac1c 381 Gene3D G3DSA:3.40.50.1820 2 379 4.9E-53 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_07205 81deae7b48bb729d9a4ef58b191bac1c 381 SUPERFAMILY SSF53474 21 322 3.38E-16 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_07205 81deae7b48bb729d9a4ef58b191bac1c 381 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 23 291 7.7E-14 T 12-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 BEN31_06325 bc9ac2404e9b32c2d04d58b8cf64c86a 262 Pfam PF04445 Putative SAM-dependent methyltransferase 75 250 3.3E-16 T 12-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 BEN31_06325 bc9ac2404e9b32c2d04d58b8cf64c86a 262 Gene3D G3DSA:3.40.50.150 66 260 1.4E-42 T 12-10-2018 BEN31_06325 bc9ac2404e9b32c2d04d58b8cf64c86a 262 SUPERFAMILY SSF53335 3 257 6.09E-58 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_09235 dac49747d4d4ac053aae2c6e0bd80e17 147 SUPERFAMILY SSF54631 13 139 2.56E-26 T 12-10-2018 BEN31_09235 dac49747d4d4ac053aae2c6e0bd80e17 147 Gene3D G3DSA:3.10.580.10 1 147 8.5E-57 T 12-10-2018 BEN31_02550 86eab450ca48d245fda2b25b9798a53e 158 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 156 3.7E-67 T 12-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 BEN31_02550 86eab450ca48d245fda2b25b9798a53e 158 SUPERFAMILY SSF55811 24 110 3.79E-20 T 12-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 BEN31_02550 86eab450ca48d245fda2b25b9798a53e 158 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 12-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 BEN31_02550 86eab450ca48d245fda2b25b9798a53e 158 PRINTS PR00502 NUDIX hydrolase family signature 62 77 2.0E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN31_02550 86eab450ca48d245fda2b25b9798a53e 158 PRINTS PR00502 NUDIX hydrolase family signature 48 62 2.0E-6 T 12-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 BEN31_02550 86eab450ca48d245fda2b25b9798a53e 158 Pfam PF00293 NUDIX domain 31 87 1.2E-12 T 12-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 BEN31_02550 86eab450ca48d245fda2b25b9798a53e 158 Gene3D G3DSA:3.90.79.10 1 158 3.0E-47 T 12-10-2018 BEN31_01345 fa73cb7803c8e3593a867d0f7aa422cb 100 SUPERFAMILY SSF52833 9 97 7.59E-16 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_01345 fa73cb7803c8e3593a867d0f7aa422cb 100 Gene3D G3DSA:3.40.30.10 1 99 1.6E-13 T 12-10-2018 BEN31_01345 fa73cb7803c8e3593a867d0f7aa422cb 100 Pfam PF00085 Thioredoxin 6 82 1.3E-9 T 12-10-2018 IPR013766 Thioredoxin domain GO:0045454 BEN31_10270 2d2d8c546ca4a709a555b2c7c7affc18 386 PIRSF PIRSF007487 1 386 1.2E-72 T 12-10-2018 IPR021176 Competence-induced protein CoiA BEN31_10270 2d2d8c546ca4a709a555b2c7c7affc18 386 Pfam PF06054 Competence protein CoiA-like family 1 365 3.5E-56 T 12-10-2018 IPR010330 Competence-induced protein CoiA-like BEN31_03115 ddc70df7de048124d367d00aa51a5630 173 Pfam PF06271 RDD family 33 156 3.3E-22 T 12-10-2018 IPR010432 RDD BEN31_13055 af93d4426fd2da73ffc44cebf5c74999 207 Pfam PF00881 Nitroreductase family 9 185 1.2E-25 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN31_13055 af93d4426fd2da73ffc44cebf5c74999 207 Gene3D G3DSA:3.40.109.10 2 207 8.3E-57 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_13055 af93d4426fd2da73ffc44cebf5c74999 207 SUPERFAMILY SSF55469 4 206 5.37E-46 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_06645 d4d41ee673a79a7e83dba8e448a83ec6 166 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 89 113 - T 12-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site BEN31_06645 d4d41ee673a79a7e83dba8e448a83ec6 166 SUPERFAMILY SSF57716 86 120 1.04E-6 T 12-10-2018 BEN31_06645 d4d41ee673a79a7e83dba8e448a83ec6 166 Gene3D G3DSA:1.20.120.910 2 125 1.1E-25 T 12-10-2018 BEN31_06645 d4d41ee673a79a7e83dba8e448a83ec6 166 SUPERFAMILY SSF109635 3 85 8.11E-9 T 12-10-2018 IPR037187 DksA, N-terminal domain superfamily BEN31_06645 d4d41ee673a79a7e83dba8e448a83ec6 166 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 84 113 3.8E-9 T 12-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 BEN31_07075 b10c794b063136931c7d71ecddac4b92 471 Gene3D G3DSA:3.40.50.2300 2 107 4.3E-40 T 12-10-2018 BEN31_07075 b10c794b063136931c7d71ecddac4b92 471 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 8 97 1.1E-15 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_07075 b10c794b063136931c7d71ecddac4b92 471 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 89 1.1E-30 T 12-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 BEN31_07075 b10c794b063136931c7d71ecddac4b92 471 SUPERFAMILY SSF52794 5 106 8.89E-37 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_07075 b10c794b063136931c7d71ecddac4b92 471 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 127 462 1.4E-108 T 12-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 BEN31_13695 70144817b91cab7df5f423b4c1e29bdd 144 SUPERFAMILY SSF55804 3 142 1.44E-43 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_13695 70144817b91cab7df5f423b4c1e29bdd 144 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 142 3.3E-38 T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_13695 70144817b91cab7df5f423b4c1e29bdd 144 Gene3D G3DSA:3.40.930.10 2 142 3.3E-47 T 12-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 BEN31_13695 70144817b91cab7df5f423b4c1e29bdd 144 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 48 64 - T 12-10-2018 IPR002178 PTS EIIA type-2 domain BEN31_07705 a855cd5500009ff1e48cfc13d2e9432a 244 Pfam PF05908 Poly-gamma-glutamate hydrolase 44 234 3.4E-69 T 12-10-2018 IPR008585 Poly-gamma-glutamate hydrolase BEN31_07705 a855cd5500009ff1e48cfc13d2e9432a 244 Gene3D G3DSA:3.40.630.100 39 244 1.0E-56 T 12-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily BEN31_07280 ea679aaccc3762c8a3ecdc70f0caa3bf 364 Gene3D G3DSA:3.20.20.70 1 360 7.3E-106 T 12-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 BEN31_07280 ea679aaccc3762c8a3ecdc70f0caa3bf 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 343 1.0E-80 T 12-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 BEN31_07280 ea679aaccc3762c8a3ecdc70f0caa3bf 364 SUPERFAMILY SSF51395 5 349 6.77E-101 T 12-10-2018 BEN31_05575 2bff936e2ae8a795a1ffbaba7cd3f97a 138 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 27 138 2.0E-42 T 12-10-2018 IPR020144 Stage V sporulation protein AB BEN31_05575 2bff936e2ae8a795a1ffbaba7cd3f97a 138 Pfam PF13782 Stage V sporulation protein AB 27 135 2.3E-35 T 12-10-2018 IPR020144 Stage V sporulation protein AB BEN31_12280 ea9768103bf0dc019184f1854749bc11 309 SUPERFAMILY SSF53448 4 281 2.17E-14 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_12280 ea9768103bf0dc019184f1854749bc11 309 Pfam PF03407 Nucleotide-diphospho-sugar transferase 36 174 5.4E-7 T 12-10-2018 IPR005069 Nucleotide-diphospho-sugar transferase BEN31_12105 ec23dd1fb15c667810898f03d210d301 167 Pfam PF07681 DoxX 16 115 1.6E-11 T 12-10-2018 IPR032808 DoxX family BEN31_18440 ec50e3482cdcd3af6497c35f5e134b66 327 Gene3D G3DSA:2.130.10.10 34 211 2.5E-19 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_18440 ec50e3482cdcd3af6497c35f5e134b66 327 SUPERFAMILY SSF51004 49 322 1.73E-40 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BEN31_18440 ec50e3482cdcd3af6497c35f5e134b66 327 Gene3D G3DSA:2.130.10.10 212 327 6.7E-15 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_11280 078911a9931561b99d63ee60018e59ec 116 Pfam PF17326 Family of unknown function (DUF5365) 1 112 1.3E-31 T 12-10-2018 IPR020355 Uncharacterised protein family YhcU BEN31_11280 078911a9931561b99d63ee60018e59ec 116 ProDom PD081567 YHCU 1 108 7.0E-18 T 12-10-2018 IPR020355 Uncharacterised protein family YhcU BEN31_08655 ae78618741d93f4b39736be7402a1722 312 Gene3D G3DSA:3.40.50.1360 57 312 1.9E-83 T 12-10-2018 BEN31_08655 ae78618741d93f4b39736be7402a1722 312 Pfam PF13384 Homeodomain-like domain 8 50 1.4E-5 T 12-10-2018 BEN31_08655 ae78618741d93f4b39736be7402a1722 312 Gene3D G3DSA:1.10.10.60 1 53 3.5E-21 T 12-10-2018 BEN31_08655 ae78618741d93f4b39736be7402a1722 312 SUPERFAMILY SSF100950 64 312 4.65E-72 T 12-10-2018 IPR037171 NagB/RpiA transferase-like BEN31_08655 ae78618741d93f4b39736be7402a1722 312 Pfam PF04198 Putative sugar-binding domain 65 312 8.3E-72 T 12-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 BEN31_03040 bbeb68b002dba102172b2861568f291a 195 SUPERFAMILY SSF52218 1 193 1.2E-47 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_03040 bbeb68b002dba102172b2861568f291a 195 Pfam PF02525 Flavodoxin-like fold 1 187 1.7E-40 T 12-10-2018 IPR003680 Flavodoxin-like fold BEN31_03040 bbeb68b002dba102172b2861568f291a 195 Gene3D G3DSA:3.40.50.360 1 195 5.8E-50 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 26 271 8.8E-84 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 Gene3D G3DSA:3.40.50.1820 10 273 2.9E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 7.5E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 7.5E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 7.5E-9 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 25 272 35.681 T 12-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 Pfam PF00561 alpha/beta hydrolase fold 28 258 1.9E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02440 cf8feb3b8902b87b1013a57eb27560b0 274 SUPERFAMILY SSF53474 10 271 1.0E-47 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_06505 c6fbc80728a2090dcb8f70b0cb65ca60 83 ProDom PD710533 YODI TRANSMEMBRANE MEMBRANE 2 83 2.0E-11 T 12-10-2018 BEN31_16960 aed9f22e5391b367f4f2fbafca1a3243 226 Pfam PF04172 LrgB-like family 11 223 1.1E-74 T 12-10-2018 IPR007300 CidB/LrgB family BEN31_16960 aed9f22e5391b367f4f2fbafca1a3243 226 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 1 223 9.0E-89 T 12-10-2018 IPR005261 Conserved hypothetical protein CHP00659 BEN31_00535 6d980408bc6afe3ceb16cb3a0a7dd4d6 271 Pfam PF00005 ABC transporter 29 179 2.2E-31 T 12-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 BEN31_00535 6d980408bc6afe3ceb16cb3a0a7dd4d6 271 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 12-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 BEN31_00535 6d980408bc6afe3ceb16cb3a0a7dd4d6 271 Gene3D G3DSA:3.40.50.300 1 267 2.3E-69 T 12-10-2018 BEN31_00535 6d980408bc6afe3ceb16cb3a0a7dd4d6 271 SUPERFAMILY SSF52540 3 243 5.76E-60 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_00535 6d980408bc6afe3ceb16cb3a0a7dd4d6 271 SMART SM00382 38 230 1.0E-9 T 12-10-2018 IPR003593 AAA+ ATPase domain BEN31_13610 9090159472daf94273ddbfeaa9bec4b9 360 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 104 324 1.9E-37 T 12-10-2018 IPR005079 Peptidase C45 BEN31_13610 9090159472daf94273ddbfeaa9bec4b9 360 Gene3D G3DSA:3.60.60.10 81 334 1.5E-40 T 12-10-2018 BEN31_13610 9090159472daf94273ddbfeaa9bec4b9 360 SUPERFAMILY SSF56235 104 262 3.78E-16 T 12-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal BEN31_03080 5cc3573e9d83cb4019f9b0eee0324ae5 306 Gene3D G3DSA:3.40.50.1980 138 306 4.9E-58 T 12-10-2018 BEN31_03080 5cc3573e9d83cb4019f9b0eee0324ae5 306 Gene3D G3DSA:3.40.50.1980 49 137 1.1E-25 T 12-10-2018 BEN31_03080 5cc3573e9d83cb4019f9b0eee0324ae5 306 Pfam PF01497 Periplasmic binding protein 62 281 1.4E-28 T 12-10-2018 IPR002491 ABC transporter periplasmic binding domain BEN31_03080 5cc3573e9d83cb4019f9b0eee0324ae5 306 SUPERFAMILY SSF53807 35 300 1.33E-51 T 12-10-2018 BEN31_03000 b929c1b2052c43a7e8b7c3abc7b94aff 447 Pfam PF05525 Branched-chain amino acid transport protein 7 432 4.9E-162 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BEN31_03000 b929c1b2052c43a7e8b7c3abc7b94aff 447 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 420 7.4E-157 T 12-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 BEN31_16780 0e5456c29ed8aed894c85ebe0858c6b7 328 Pfam PF01032 FecCD transport family 14 320 3.4E-85 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_16780 0e5456c29ed8aed894c85ebe0858c6b7 328 SUPERFAMILY SSF81345 4 320 1.57E-75 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_16780 0e5456c29ed8aed894c85ebe0858c6b7 328 Gene3D G3DSA:1.10.3470.10 2 325 3.6E-87 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_17310 fe66e3fed3edac8c7066d98134818523 145 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 16 130 4.5E-11 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BEN31_17310 fe66e3fed3edac8c7066d98134818523 145 SMART SM00860 16 131 2.2E-7 T 12-10-2018 IPR018958 Knr4/Smi1-like domain BEN31_17310 fe66e3fed3edac8c7066d98134818523 145 Gene3D G3DSA:3.40.1580.10 3 141 6.3E-13 T 12-10-2018 IPR037883 Knr4/Smi1-like domain superfamily BEN31_17310 fe66e3fed3edac8c7066d98134818523 145 SUPERFAMILY SSF160631 12 143 5.49E-16 T 12-10-2018 BEN31_05525 88861c9a8b99dd85bb62208f0b0096d5 150 Pfam PF01475 Ferric uptake regulator family 15 136 9.1E-41 T 12-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 BEN31_05525 88861c9a8b99dd85bb62208f0b0096d5 150 Gene3D G3DSA:1.10.10.10 1 88 6.2E-29 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_05525 88861c9a8b99dd85bb62208f0b0096d5 150 Gene3D G3DSA:3.30.1490.190 93 149 3.2E-16 T 12-10-2018 BEN31_05525 88861c9a8b99dd85bb62208f0b0096d5 150 SUPERFAMILY SSF46785 7 141 8.84E-39 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_15620 45105ede4a9c3f178a0f9a4b5ad18b29 74 Pfam PF10704 Protein of unknown function (DUF2508) 4 69 2.5E-24 T 12-10-2018 IPR019644 Protein of unknown function DUF2508 BEN31_13215 fd90d2cb0ba199e1f7eeeabcd273c7b8 395 SUPERFAMILY SSF103473 4 383 6.54E-48 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_13215 fd90d2cb0ba199e1f7eeeabcd273c7b8 395 Gene3D G3DSA:1.20.1250.20 1 386 2.9E-40 T 12-10-2018 BEN31_13215 fd90d2cb0ba199e1f7eeeabcd273c7b8 395 Pfam PF07690 Major Facilitator Superfamily 15 343 1.2E-23 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_16325 e468a9bb26d33d6acb4deb2753911549 775 Pfam PF02687 FtsX-like permease family 285 367 2.3E-9 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN31_04235 3978f925eca02128d155be220ce880f8 232 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 116 1.0E-19 T 12-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 BEN31_04235 3978f925eca02128d155be220ce880f8 232 SUPERFAMILY SSF161098 16 215 3.27E-34 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_04235 3978f925eca02128d155be220ce880f8 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 223 4.2E-16 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_04235 3978f925eca02128d155be220ce880f8 232 Gene3D G3DSA:1.10.3720.10 8 226 7.3E-44 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00995 068a270c3474855bc768cae1f95fa7fb 101 Gene3D G3DSA:1.20.58.1000 1 100 3.4E-37 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily BEN31_00995 068a270c3474855bc768cae1f95fa7fb 101 Pfam PF02583 Metal-sensitive transcriptional repressor 17 97 2.2E-33 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 BEN31_00245 6aaca358a3c27dbd700a754499c8deed 141 Pfam PF13022 Helix-turn-helix of insertion element transposase 10 129 1.1E-30 T 12-10-2018 IPR024978 Homeodomain, phBC6A51-type BEN31_00245 6aaca358a3c27dbd700a754499c8deed 141 Gene3D G3DSA:1.10.10.60 10 107 2.9E-37 T 12-10-2018 BEN31_00245 6aaca358a3c27dbd700a754499c8deed 141 SUPERFAMILY SSF46689 1 118 3.37E-38 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_03035 7b61a87832a38832d7dd93f04cd5e7d6 143 SMART SM00347 26 126 3.5E-18 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_03035 7b61a87832a38832d7dd93f04cd5e7d6 143 SUPERFAMILY SSF46785 13 140 1.48E-24 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_03035 7b61a87832a38832d7dd93f04cd5e7d6 143 Gene3D G3DSA:1.10.10.10 1 142 1.1E-25 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_03035 7b61a87832a38832d7dd93f04cd5e7d6 143 Pfam PF01047 MarR family 33 90 1.2E-11 T 12-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 BEN31_02215 676e059f7c84419c24642c91431d403e 70 Pfam PF10960 BhlA holin family 1 64 4.9E-23 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB BEN31_02215 676e059f7c84419c24642c91431d403e 70 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 64 3.0E-23 T 12-10-2018 IPR024405 Prophage protein BhlA/UviB BEN31_00440 61e7f1e05e37100c8b40b3e9253fcda4 74 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 6 73 2.4E-27 T 12-10-2018 IPR006479 Holin BEN31_00440 61e7f1e05e37100c8b40b3e9253fcda4 74 Pfam PF04688 SPP1 phage holin 5 73 1.2E-27 T 12-10-2018 IPR006479 Holin BEN31_00440 61e7f1e05e37100c8b40b3e9253fcda4 74 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 6 69 1.0E-12 T 12-10-2018 IPR006479 Holin BEN31_07875 2ffdff154e23c30142e4204cebb95915 78 Pfam PF14035 YlzJ-like protein 3 64 3.4E-22 T 12-10-2018 IPR025619 YlzJ-like protein BEN31_04875 2b4585b15a2c5dd8b8468a07e74f708a 317 Gene3D G3DSA:3.30.420.40 128 297 5.0E-106 T 12-10-2018 BEN31_04875 2b4585b15a2c5dd8b8468a07e74f708a 317 Pfam PF00480 ROK family 7 313 2.0E-78 T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_04875 2b4585b15a2c5dd8b8468a07e74f708a 317 Gene3D G3DSA:3.30.420.40 7 309 5.0E-106 T 12-10-2018 BEN31_04875 2b4585b15a2c5dd8b8468a07e74f708a 317 SUPERFAMILY SSF53067 5 313 3.02E-71 T 12-10-2018 BEN31_04875 2b4585b15a2c5dd8b8468a07e74f708a 317 ProSitePatterns PS01125 ROK family signature. 137 164 - T 12-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 BEN31_04875 2b4585b15a2c5dd8b8468a07e74f708a 317 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 316 1.8E-128 T 12-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 BEN31_11570 b25dc50c0313e4ade2801ed66b07f637 292 Pfam PF14540 Nucleotidyltransferase-like 1 118 5.0E-48 T 12-10-2018 IPR029348 Nucleotidyltransferase-like domain BEN31_11570 b25dc50c0313e4ade2801ed66b07f637 292 Gene3D G3DSA:3.30.460.10 1 114 1.7E-42 T 12-10-2018 BEN31_11570 b25dc50c0313e4ade2801ed66b07f637 292 Gene3D G3DSA:1.20.120.330 115 232 4.7E-47 T 12-10-2018 BEN31_11570 b25dc50c0313e4ade2801ed66b07f637 292 ProDom PD128250 YGXA BH0953 1 279 8.0E-132 T 12-10-2018 BEN31_04715 1c23734739fe5117a241ec69c8e07722 373 SUPERFAMILY SSF102705 6 372 1.44E-129 T 12-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily BEN31_04715 1c23734739fe5117a241ec69c8e07722 373 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 369 6.4E-104 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BEN31_04715 1c23734739fe5117a241ec69c8e07722 373 PIRSF PIRSF037489 3 373 3.5E-152 T 12-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria BEN31_04715 1c23734739fe5117a241ec69c8e07722 373 Gene3D G3DSA:3.30.70.120 133 238 2.4E-38 T 12-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal BEN31_04715 1c23734739fe5117a241ec69c8e07722 373 Gene3D G3DSA:3.40.1390.30 4 127 2.4E-40 T 12-10-2018 BEN31_04715 1c23734739fe5117a241ec69c8e07722 373 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 351 4.3E-79 T 12-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 BEN31_07920 b50e73f7572096f13b417049fadea873 307 Gene3D G3DSA:3.90.1200.10 99 295 4.3E-23 T 12-10-2018 BEN31_07920 b50e73f7572096f13b417049fadea873 307 Pfam PF01636 Phosphotransferase enzyme family 24 240 1.8E-28 T 12-10-2018 IPR002575 Aminoglycoside phosphotransferase BEN31_07920 b50e73f7572096f13b417049fadea873 307 SUPERFAMILY SSF56112 9 259 5.83E-32 T 12-10-2018 IPR011009 Protein kinase-like domain superfamily BEN31_05500 9972eab19b1e7473b667411b700289a6 393 SUPERFAMILY SSF47781 309 370 4.15E-6 T 12-10-2018 IPR010994 RuvA domain 2-like BEN31_05500 9972eab19b1e7473b667411b700289a6 393 Pfam PF13263 PHP-associated 196 241 3.0E-7 T 12-10-2018 BEN31_05500 9972eab19b1e7473b667411b700289a6 393 SUPERFAMILY SSF89550 28 243 2.55E-11 T 12-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 BEN31_05500 9972eab19b1e7473b667411b700289a6 393 TIGRFAM TIGR00375 TIGR00375: TIGR00375 family protein 7 386 2.7E-100 T 12-10-2018 IPR005287 Conserved hypothetical protein CHP00375 BEN31_05500 9972eab19b1e7473b667411b700289a6 393 Gene3D G3DSA:3.20.20.140 2 238 2.2E-11 T 12-10-2018 BEN31_00250 020fd3abeef87e2d8af503825fbaed74 534 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 36 144 8.4E-9 T 12-10-2018 IPR021145 Portal protein BEN31_02765 f9f89d9d72b7b730a7e69b38a79482cb 510 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 45 488 9.5E-179 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BEN31_02765 f9f89d9d72b7b730a7e69b38a79482cb 510 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 7 488 1.5E-196 T 12-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 BEN31_02765 f9f89d9d72b7b730a7e69b38a79482cb 510 ProSitePatterns PS01303 BCCT family of transporters signature. 310 319 - T 12-10-2018 IPR018093 BCCT transporter, conserved site BEN31_17070 fdfaeb94758809473fff31e41fefacae 88 ProDom PD062384 GERMINATION SPORE TRANSMEMBRANE MEMBRANE MORPHOGENESIS YWCE 1 85 2.0E-31 T 12-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE BEN31_17070 fdfaeb94758809473fff31e41fefacae 88 Pfam PF17368 Spore morphogenesis and germination protein YwcE 1 84 4.0E-40 T 12-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE BEN31_13555 c62749de31f4a8a1d17700c705d040e9 310 SUPERFAMILY SSF103481 188 287 7.59E-15 T 12-10-2018 BEN31_13555 c62749de31f4a8a1d17700c705d040e9 310 Pfam PF00892 EamA-like transporter family 7 140 3.0E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_13555 c62749de31f4a8a1d17700c705d040e9 310 Pfam PF00892 EamA-like transporter family 151 287 9.0E-21 T 12-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 BEN31_13555 c62749de31f4a8a1d17700c705d040e9 310 SUPERFAMILY SSF103481 41 142 8.5E-13 T 12-10-2018 BEN31_00340 4e90faf75b36b9ec328a6da2e2dacf63 88 Pfam PF10779 Haemolysin XhlA 15 75 4.2E-12 T 12-10-2018 IPR019715 Haemolysin XhlA BEN31_12130 54ae77cade2f9012307f41f124ad67ae 216 Pfam PF03475 3-alpha domain 174 215 8.9E-7 T 12-10-2018 IPR005163 3-alpha domain BEN31_12130 54ae77cade2f9012307f41f124ad67ae 216 SUPERFAMILY SSF50800 7 215 1.2E-61 T 12-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily BEN31_12130 54ae77cade2f9012307f41f124ad67ae 216 Pfam PF03473 MOSC domain 54 159 3.7E-18 T 12-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 BEN31_12130 54ae77cade2f9012307f41f124ad67ae 216 Gene3D G3DSA:2.40.33.20 2 216 3.4E-64 T 12-10-2018 BEN31_03430 e3558ec0204ae4196eb37deefee43d07 177 Pfam PF02674 Colicin V production protein 2 161 4.1E-36 T 12-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 BEN31_03320 4da049e3260e101a92c372b440e3189b 212 Pfam PF09335 SNARE associated Golgi protein 61 177 2.7E-23 T 12-10-2018 IPR032816 SNARE associated Golgi protein BEN31_00655 8843b7e8c20bae3f0f6a00771b66c62e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 201 1.8E-23 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_00655 8843b7e8c20bae3f0f6a00771b66c62e 217 Gene3D G3DSA:1.10.3720.10 14 207 1.1E-35 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00655 8843b7e8c20bae3f0f6a00771b66c62e 217 SUPERFAMILY SSF161098 13 196 5.76E-42 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_12725 29fb033ed98016067ec2c92753426248 243 Pfam PF02517 CAAX protease self-immunity 103 199 3.2E-13 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BEN31_05090 3768f81ad738a589b451f88465d5f573 68 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 61 1.1E-15 T 12-10-2018 IPR025664 Stage III sporulation protein AC/AD family BEN31_05090 3768f81ad738a589b451f88465d5f573 68 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 2.7E-32 T 12-10-2018 IPR009570 Stage III sporulation protein AC BEN31_08850 b1dc6d10c1dd3fb0c0e5f019ed2104ff 347 Pfam PF14504 CAP-associated N-terminal 60 200 7.1E-53 T 12-10-2018 IPR029410 CAP-associated domain BEN31_08850 b1dc6d10c1dd3fb0c0e5f019ed2104ff 347 Pfam PF00188 Cysteine-rich secretory protein family 231 341 7.7E-18 T 12-10-2018 IPR014044 CAP domain BEN31_08850 b1dc6d10c1dd3fb0c0e5f019ed2104ff 347 Gene3D G3DSA:3.40.33.10 22 345 9.2E-108 T 12-10-2018 IPR035940 CAP superfamily BEN31_08850 b1dc6d10c1dd3fb0c0e5f019ed2104ff 347 SUPERFAMILY SSF55797 225 342 6.8E-23 T 12-10-2018 IPR035940 CAP superfamily BEN31_10025 5e14859b7d102a5c2eae2563603bcf45 372 Pfam PF13181 Tetratricopeptide repeat 336 361 9.5E-6 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_10025 5e14859b7d102a5c2eae2563603bcf45 372 Gene3D G3DSA:1.25.40.10 1 372 4.4E-122 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_10025 5e14859b7d102a5c2eae2563603bcf45 372 SMART SM00028 217 250 3.8E-5 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_10025 5e14859b7d102a5c2eae2563603bcf45 372 SMART SM00028 136 169 61.0 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_10025 5e14859b7d102a5c2eae2563603bcf45 372 SMART SM00028 330 363 0.066 T 12-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 BEN31_10025 5e14859b7d102a5c2eae2563603bcf45 372 Pfam PF13424 Tetratricopeptide repeat 190 246 1.5E-10 T 12-10-2018 BEN31_10025 5e14859b7d102a5c2eae2563603bcf45 372 SUPERFAMILY SSF48452 114 315 5.69E-17 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_07285 ad724670273686fd1b6b10ca3522158d 119 Gene3D G3DSA:1.10.10.10 7 118 6.5E-34 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_07285 ad724670273686fd1b6b10ca3522158d 119 Pfam PF01638 HxlR-like helix-turn-helix 24 113 2.4E-30 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_07285 ad724670273686fd1b6b10ca3522158d 119 SUPERFAMILY SSF46785 14 111 2.64E-30 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_13835 d635d99ff7bbee878a5a7ed84dabbcf6 214 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 10 211 4.4E-7 T 12-10-2018 IPR003740 Uncharacterised membrane protein YitT BEN31_11105 29f77476f95b92a64f6c8294ef2a93d0 229 SUPERFAMILY SSF52467 1 229 7.01E-66 T 12-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily BEN31_11105 29f77476f95b92a64f6c8294ef2a93d0 229 Gene3D G3DSA:3.40.50.1220 1 228 1.7E-66 T 12-10-2018 BEN31_11105 29f77476f95b92a64f6c8294ef2a93d0 229 Pfam PF02146 Sir2 family 5 184 3.2E-54 T 12-10-2018 IPR003000 Sirtuin family GO:0070403 BEN31_11105 29f77476f95b92a64f6c8294ef2a93d0 229 Gene3D G3DSA:3.30.1600.10 14 156 1.7E-66 T 12-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily BEN31_00140 3f2b6588d9d43ed12ea95f6ccea6fe64 169 Pfam PF06725 3D domain 109 164 8.8E-6 T 12-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 BEN31_17260 71c3c1d34d228733eb3c387708764663 235 SUPERFAMILY SSF51182 10 226 2.51E-28 T 12-10-2018 IPR011051 RmlC-like cupin domain superfamily BEN31_17260 71c3c1d34d228733eb3c387708764663 235 Gene3D G3DSA:2.60.120.10 11 225 5.2E-94 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_17260 71c3c1d34d228733eb3c387708764663 235 Gene3D G3DSA:2.60.120.10 15 124 5.2E-94 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_17260 71c3c1d34d228733eb3c387708764663 235 Pfam PF07883 Cupin domain 41 106 1.5E-9 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BEN31_17260 71c3c1d34d228733eb3c387708764663 235 Pfam PF07883 Cupin domain 152 211 5.2E-8 T 12-10-2018 IPR013096 Cupin 2, conserved barrel BEN31_00845 e1b9030e63912a8aff153ade59fc17b4 413 Pfam PF04860 Phage portal protein 46 369 6.9E-92 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BEN31_00845 e1b9030e63912a8aff153ade59fc17b4 413 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 40 376 7.5E-85 T 12-10-2018 IPR006427 Phage portal protein, HK97 BEN31_01445 ebcb44e5d560a9c92333e8ddfa96ee88 247 Pfam PF06276 Ferric iron reductase FhuF-like transporter 58 206 1.8E-12 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain BEN31_01445 ebcb44e5d560a9c92333e8ddfa96ee88 247 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 214 238 4.4E-5 T 12-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 BEN31_07395 b837707cfd13d958f3796f4d85ae7aeb 133 Gene3D G3DSA:2.60.40.790 30 117 3.4E-10 T 12-10-2018 IPR008978 HSP20-like chaperone BEN31_07395 b837707cfd13d958f3796f4d85ae7aeb 133 SUPERFAMILY SSF49764 30 118 4.19E-9 T 12-10-2018 IPR008978 HSP20-like chaperone BEN31_07185 412438c3dd5326e487009b5f2109d1a8 102 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 1 99 2.0E-28 T 12-10-2018 BEN31_07185 412438c3dd5326e487009b5f2109d1a8 102 Pfam PF09685 Domain of unknown function (DUF4870) 5 95 1.9E-8 T 12-10-2018 IPR019109 Protein of unknown function DUF4870 BEN31_16630 4f198d7e5df728deb37eb8450b5388a7 107 Pfam PF06013 Proteins of 100 residues with WXG 2 80 2.2E-12 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like BEN31_16630 4f198d7e5df728deb37eb8450b5388a7 107 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 2 86 1.8E-16 T 12-10-2018 IPR010310 Type VII secretion system ESAT-6-like BEN31_16630 4f198d7e5df728deb37eb8450b5388a7 107 SUPERFAMILY SSF140453 3 88 4.84E-14 T 12-10-2018 IPR036689 ESAT-6-like superfamily BEN31_16630 4f198d7e5df728deb37eb8450b5388a7 107 Gene3D G3DSA:1.10.287.1060 1 88 1.3E-14 T 12-10-2018 BEN31_03880 3a91fb22af266b0b06053010e79a5b63 205 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 16 193 6.6E-22 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BEN31_16670 a787c9877e37a9426b4283a98b71912f 468 Pfam PF03553 Na+/H+ antiporter family 159 451 7.0E-68 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BEN31_16670 a787c9877e37a9426b4283a98b71912f 468 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 458 5.9E-204 T 12-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 BEN31_11760 621e961c73ed051be981663f62709ed0 36 Pfam PF14152 YfhE-like protein 2 36 9.6E-11 T 12-10-2018 IPR025437 YfhE-like protein BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 158 6.7E-52 T 12-10-2018 IPR023635 Peptide deformylase BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 SUPERFAMILY SSF56420 2 154 5.76E-54 T 12-10-2018 IPR036821 Peptide deformylase superfamily BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 Hamap MF_00163 Peptide deformylase [def]. 2 158 29.19 T 12-10-2018 IPR023635 Peptide deformylase BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 Gene3D G3DSA:3.90.45.10 1 156 1.7E-57 T 12-10-2018 IPR036821 Peptide deformylase superfamily BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 PIRSF PIRSF004749 1 160 4.6E-51 T 12-10-2018 IPR023635 Peptide deformylase BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 PRINTS PR01576 Peptide deformylase signature 119 148 2.9E-35 T 12-10-2018 IPR023635 Peptide deformylase BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 PRINTS PR01576 Peptide deformylase signature 33 62 2.9E-35 T 12-10-2018 IPR023635 Peptide deformylase BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 PRINTS PR01576 Peptide deformylase signature 88 99 2.9E-35 T 12-10-2018 IPR023635 Peptide deformylase BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 PRINTS PR01576 Peptide deformylase signature 100 118 2.9E-35 T 12-10-2018 IPR023635 Peptide deformylase BEN31_08440 6be1e4f2b7a396a4611f3ecb78c06a24 160 Pfam PF01327 Polypeptide deformylase 3 148 3.9E-49 T 12-10-2018 IPR023635 Peptide deformylase BEN31_14580 612a98cf68c2019a845acfe38cd2b029 256 SUPERFAMILY SSF109998 67 229 2.75E-30 T 12-10-2018 IPR027304 Trigger factor/SurA domain superfamily BEN31_14580 612a98cf68c2019a845acfe38cd2b029 256 Gene3D G3DSA:1.10.4030.30 59 255 7.5E-30 T 12-10-2018 BEN31_14580 612a98cf68c2019a845acfe38cd2b029 256 Pfam PF13624 SurA N-terminal domain 67 183 5.6E-19 T 12-10-2018 BEN31_16720 4016f6ea3ada7eea20eca8497c8edfe4 107 SUPERFAMILY SSF52794 1 105 7.32E-31 T 12-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 BEN31_16720 4016f6ea3ada7eea20eca8497c8edfe4 107 Gene3D G3DSA:3.40.50.2300 2 107 1.6E-31 T 12-10-2018 BEN31_16720 4016f6ea3ada7eea20eca8497c8edfe4 107 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 98 3.8E-19 T 12-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 BEN31_03050 c08d16f47e11966d0fea51b4663c6dd6 645 PIRSF PIRSF018968 1 645 6.1E-152 T 12-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 BEN31_03050 c08d16f47e11966d0fea51b4663c6dd6 645 Pfam PF02687 FtsX-like permease family 85 178 3.3E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN31_02950 0c82a20d43a449a02b13fd70e51e5924 215 SUPERFAMILY SSF53474 36 144 2.89E-23 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_02950 0c82a20d43a449a02b13fd70e51e5924 215 Pfam PF01674 Lipase (class 2) 38 133 9.5E-14 T 12-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 BEN31_02950 0c82a20d43a449a02b13fd70e51e5924 215 Gene3D G3DSA:3.40.50.1820 35 215 7.5E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_18365 19e3ca525197e686929e521e998cd18c 244 Gene3D G3DSA:3.40.50.1820 29 242 1.5E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_18365 19e3ca525197e686929e521e998cd18c 244 SUPERFAMILY SSF53474 59 216 3.92E-17 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_18365 19e3ca525197e686929e521e998cd18c 244 Pfam PF12695 Alpha/beta hydrolase family 64 226 3.5E-59 T 12-10-2018 IPR029059 Alpha/beta hydrolase fold-5 BEN31_01955 cdbcb1e09f5b01ed728e7cf52a61a0f8 133 Pfam PF08868 YugN-like family 4 132 9.9E-55 T 12-10-2018 IPR014967 Uncharacterised protein family, YugN-like BEN31_01955 cdbcb1e09f5b01ed728e7cf52a61a0f8 133 Gene3D G3DSA:3.30.310.100 3 115 1.4E-29 T 12-10-2018 IPR036491 YugN-like superfamily BEN31_01955 cdbcb1e09f5b01ed728e7cf52a61a0f8 133 SUPERFAMILY SSF160755 1 132 2.62E-37 T 12-10-2018 IPR036491 YugN-like superfamily BEN31_16745 81a6fd89cc7148d7ec201e17de444962 253 Gene3D G3DSA:3.40.50.10990 63 220 1.2E-53 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN31_16745 81a6fd89cc7148d7ec201e17de444962 253 SUPERFAMILY SSF142695 72 220 3.4E-46 T 12-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN31_16745 81a6fd89cc7148d7ec201e17de444962 253 Pfam PF00925 GTP cyclohydrolase II 73 218 5.7E-47 T 12-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 BEN31_18265 df0ba1858ccb4a7ffa2a41e56c051523 97 Pfam PF10719 Late competence development protein ComFB 4 82 2.3E-15 T 12-10-2018 IPR019657 Late competence development protein ComFB BEN31_05655 e2bc9638823d80c99209d01d80f4d1af 117 Pfam PF00583 Acetyltransferase (GNAT) family 33 109 3.4E-10 T 12-10-2018 IPR000182 GNAT domain BEN31_05655 e2bc9638823d80c99209d01d80f4d1af 117 Gene3D G3DSA:3.40.630.30 9 113 4.2E-13 T 12-10-2018 BEN31_05655 e2bc9638823d80c99209d01d80f4d1af 117 SUPERFAMILY SSF55729 5 97 2.16E-13 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_04135 c6d31217b20aeb33b17d74806450d9c1 422 ProSitePatterns PS01276 Peptidase family U32 signature. 179 197 - T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BEN31_04135 c6d31217b20aeb33b17d74806450d9c1 422 Pfam PF01136 Peptidase family U32 93 323 4.1E-86 T 12-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 BEN31_04135 c6d31217b20aeb33b17d74806450d9c1 422 Gene3D G3DSA:2.40.30.10 334 421 1.9E-35 T 12-10-2018 BEN31_04135 c6d31217b20aeb33b17d74806450d9c1 422 Pfam PF16325 Peptidase family U32 C-terminal domain 339 419 1.1E-24 T 12-10-2018 IPR032525 Peptidase family U32, C-terminal BEN31_12205 183c00404ab57a2703d129468676a1c3 218 Pfam PF13649 Methyltransferase domain 60 154 2.4E-13 T 12-10-2018 BEN31_12205 183c00404ab57a2703d129468676a1c3 218 SUPERFAMILY SSF53335 20 204 6.41E-23 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_12205 183c00404ab57a2703d129468676a1c3 218 Gene3D G3DSA:3.40.50.150 18 213 6.0E-22 T 12-10-2018 BEN31_04445 2094ac3b64ff835e0b922dc503acab2d 247 Gene3D G3DSA:3.40.50.1110 19 241 1.2E-39 T 12-10-2018 IPR036514 SGNH hydrolase superfamily BEN31_04445 2094ac3b64ff835e0b922dc503acab2d 247 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 233 1.5E-22 T 12-10-2018 IPR013830 SGNH hydrolase-type esterase domain BEN31_04445 2094ac3b64ff835e0b922dc503acab2d 247 SUPERFAMILY SSF52266 30 239 2.0E-35 T 12-10-2018 BEN31_04310 0d98d7c3375e2d8890f52472dbc2225c 541 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 17 261 2.7E-16 T 12-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 BEN31_04310 0d98d7c3375e2d8890f52472dbc2225c 541 Gene3D G3DSA:3.30.420.40 265 529 3.7E-20 T 12-10-2018 BEN31_04310 0d98d7c3375e2d8890f52472dbc2225c 541 SUPERFAMILY SSF53067 17 264 8.19E-30 T 12-10-2018 BEN31_04310 0d98d7c3375e2d8890f52472dbc2225c 541 Gene3D G3DSA:3.30.420.40 12 264 3.2E-35 T 12-10-2018 BEN31_04310 0d98d7c3375e2d8890f52472dbc2225c 541 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 277 474 4.5E-30 T 12-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 BEN31_04310 0d98d7c3375e2d8890f52472dbc2225c 541 SUPERFAMILY SSF53067 272 519 2.24E-13 T 12-10-2018 BEN31_10315 212aae0e5697908afd8565290ea81c5a 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 80 4.0E-15 T 12-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain BEN31_10315 212aae0e5697908afd8565290ea81c5a 305 Gene3D G3DSA:1.10.3720.10 93 305 3.4E-22 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_10315 212aae0e5697908afd8565290ea81c5a 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 305 9.4E-34 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_10315 212aae0e5697908afd8565290ea81c5a 305 SUPERFAMILY SSF161098 99 286 4.45E-26 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_18610 9b7745f29e590ef9b6605204b2154e5f 460 SUPERFAMILY SSF54001 331 457 5.23E-30 T 12-10-2018 IPR038765 Papain-like cysteine peptidase superfamily BEN31_18610 9b7745f29e590ef9b6605204b2154e5f 460 Gene3D G3DSA:3.90.1720.10 157 457 9.5E-36 T 12-10-2018 BEN31_18610 9b7745f29e590ef9b6605204b2154e5f 460 Pfam PF00877 NlpC/P60 family 344 456 5.2E-29 T 12-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain BEN31_11725 97799448767bcaba25683dba441aa6d2 863 Pfam PF09586 Bacterial membrane protein YfhO 13 841 2.1E-202 T 12-10-2018 IPR018580 Uncharacterised protein family YfhO BEN31_17725 d19769e5797e4c2cb80c0e400b9e188f 169 Gene3D G3DSA:3.40.30.10 52 163 2.7E-6 T 12-10-2018 BEN31_17725 d19769e5797e4c2cb80c0e400b9e188f 169 SUPERFAMILY SSF52833 59 154 2.28E-5 T 12-10-2018 IPR036249 Thioredoxin-like superfamily BEN31_02865 95af5856cae7bc68ed9dbaccb89ce3e6 148 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 1.2E-65 T 12-10-2018 IPR019884 YtoQ family protein BEN31_02865 95af5856cae7bc68ed9dbaccb89ce3e6 148 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 7.8E-70 T 12-10-2018 IPR019884 YtoQ family protein BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 SMART SM00710 317 339 4.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 SMART SM00710 289 310 130.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 SMART SM00710 219 241 490.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 SMART SM00710 254 288 1000.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 SMART SM00710 156 185 51.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 SMART SM00710 347 369 3700.0 T 12-10-2018 IPR006626 Parallel beta-helix repeat BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 Pfam PF07602 Protein of unknown function (DUF1565) 41 268 1.7E-9 T 12-10-2018 IPR011459 Domain of unknown function DUF1565 BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 Gene3D G3DSA:2.160.20.10 35 457 1.6E-62 T 12-10-2018 IPR012334 Pectin lyase fold BEN31_16905 67f11eaee33967e9a7ebf99c7e8aaafd 475 SUPERFAMILY SSF51126 49 469 7.05E-63 T 12-10-2018 IPR011050 Pectin lyase fold/virulence factor BEN31_16860 ea3b69039783e4a06e76865bc31c5bc6 204 Gene3D G3DSA:2.40.260.10 18 204 4.5E-29 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_16860 ea3b69039783e4a06e76865bc31c5bc6 204 SUPERFAMILY SSF63817 60 203 7.85E-16 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_16860 ea3b69039783e4a06e76865bc31c5bc6 204 Pfam PF04203 Sortase family 64 201 3.5E-18 T 12-10-2018 IPR005754 Sortase family BEN31_13525 2379b5a1cc3ef5d396e58c283d3c3956 422 Pfam PF13641 Glycosyltransferase like family 2 49 279 8.3E-33 T 12-10-2018 BEN31_13525 2379b5a1cc3ef5d396e58c283d3c3956 422 Gene3D G3DSA:3.90.550.10 40 263 7.8E-48 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_13525 2379b5a1cc3ef5d396e58c283d3c3956 422 SUPERFAMILY SSF53448 45 317 1.13E-62 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_14555 1e9d5dcbaa82874cc9939676c051cc36 86 Gene3D G3DSA:1.20.58.1000 1 85 4.2E-23 T 12-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily BEN31_14555 1e9d5dcbaa82874cc9939676c051cc36 86 Pfam PF02583 Metal-sensitive transcriptional repressor 4 82 4.5E-24 T 12-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 BEN31_09525 accd40c5071a5f2b7c57b6a71f123bc4 339 Pfam PF01757 Acyltransferase family 7 307 1.5E-21 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BEN31_02585 1fcb681d30a88dc6d34831c8fe7d2eaf 80 Gene3D G3DSA:2.40.240.20 1 77 3.4E-34 T 12-10-2018 BEN31_02585 1fcb681d30a88dc6d34831c8fe7d2eaf 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 6.0E-39 T 12-10-2018 IPR019699 Protein of unknown function DUF2584 BEN31_02585 1fcb681d30a88dc6d34831c8fe7d2eaf 80 SUPERFAMILY SSF88697 1 80 1.59E-31 T 12-10-2018 IPR015947 PUA-like superfamily BEN31_17210 b9c5b77b9407548cfd2ac18deb668eb8 246 Gene3D G3DSA:3.90.550.10 3 214 2.8E-34 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17210 b9c5b77b9407548cfd2ac18deb668eb8 246 SUPERFAMILY SSF53448 4 209 3.83E-27 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_17210 b9c5b77b9407548cfd2ac18deb668eb8 246 Pfam PF02348 Cytidylyltransferase 7 210 8.6E-36 T 12-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 BEN31_16675 51c0cbaaf0d80ee96495e3c9a672b64b 141 Pfam PF16888 Domain of unknown function (DUF5082) 15 104 9.6E-14 T 12-10-2018 IPR031681 Protein of unknown function DUF5082 BEN31_16675 51c0cbaaf0d80ee96495e3c9a672b64b 141 ProDom PD085159 YWQH COILED COIL 1 138 2.0E-25 T 12-10-2018 IPR020326 Uncharacterised protein family YwqH BEN31_06530 a62a517994340650c4e03cd70d0f1429 205 SUPERFAMILY SSF55469 6 201 1.96E-49 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_06530 a62a517994340650c4e03cd70d0f1429 205 Gene3D G3DSA:3.40.109.10 1 205 5.0E-51 T 12-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 BEN31_06530 a62a517994340650c4e03cd70d0f1429 205 Pfam PF00881 Nitroreductase family 11 185 6.3E-30 T 12-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 BEN31_08640 a32903fda50d3460cdcff7591f53ccfb 176 PIRSF PIRSF038321 1 176 3.1E-81 T 12-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BEN31_08640 a32903fda50d3460cdcff7591f53ccfb 176 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 171 1.9E-54 T 12-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BEN31_08640 a32903fda50d3460cdcff7591f53ccfb 176 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 4 168 8.5E-77 T 12-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 BEN31_04610 c56b054ebbe491b70a9b974ae0ed948e 330 Hamap MF_01562 UPF0365 protein . 3 323 50.121 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity BEN31_04610 c56b054ebbe491b70a9b974ae0ed948e 330 Pfam PF12127 SigmaW regulon antibacterial 9 319 3.1E-165 T 12-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity BEN31_04685 a00ab0320508be7ac36dfe11142d80e3 273 Pfam PF03618 Kinase/pyrophosphorylase 6 263 1.8E-97 T 12-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 BEN31_04685 a00ab0320508be7ac36dfe11142d80e3 273 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 269 60.898 T 12-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein BEN31_02565 f8839c708cbd7f8b129679bf7fca3194 333 Gene3D G3DSA:3.40.190.10 29 131 1.3E-15 T 12-10-2018 BEN31_02565 f8839c708cbd7f8b129679bf7fca3194 333 Pfam PF09084 NMT1/THI5 like 44 257 1.3E-21 T 12-10-2018 IPR015168 SsuA/THI5-like BEN31_02565 f8839c708cbd7f8b129679bf7fca3194 333 SUPERFAMILY SSF53850 30 259 3.86E-33 T 12-10-2018 BEN31_02565 f8839c708cbd7f8b129679bf7fca3194 333 Gene3D G3DSA:3.40.190.10 142 331 8.1E-33 T 12-10-2018 BEN31_05480 09ffb299aaa28803d8baba1602d01594 74 Pfam PF13025 Protein of unknown function (DUF3886) 5 71 3.3E-17 T 12-10-2018 IPR024980 Protein of unknown function DUF3886 BEN31_00205 e989f909740f3fcb2412cc9615bc1629 75 SUPERFAMILY SSF47413 5 71 2.17E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_00205 e989f909740f3fcb2412cc9615bc1629 75 Gene3D G3DSA:1.10.260.40 4 75 6.0E-8 T 12-10-2018 BEN31_15895 c3b570abd5b95bbd762eb786e60fc9ac 207 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 7 198 5.8E-46 T 12-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 BEN31_15895 c3b570abd5b95bbd762eb786e60fc9ac 207 Pfam PF03358 NADPH-dependent FMN reductase 8 135 4.9E-18 T 12-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 BEN31_15895 c3b570abd5b95bbd762eb786e60fc9ac 207 Gene3D G3DSA:3.40.50.360 2 207 4.2E-67 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_15895 c3b570abd5b95bbd762eb786e60fc9ac 207 SUPERFAMILY SSF52218 8 201 3.56E-48 T 12-10-2018 IPR029039 Flavoprotein-like superfamily BEN31_08765 11f7336d4f4d448809c976fd724a19fa 539 PIRSF PIRSF012535 1 539 8.2E-195 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BEN31_08765 11f7336d4f4d448809c976fd724a19fa 539 Pfam PF10079 Bacillithiol biosynthesis BshC 1 536 2.7E-170 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BEN31_08765 11f7336d4f4d448809c976fd724a19fa 539 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 539 31.435 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BEN31_08765 11f7336d4f4d448809c976fd724a19fa 539 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 12 537 7.2E-178 T 12-10-2018 IPR011199 Bacillithiol biosynthesis BshC BEN31_11735 8e3de471e25952432c559f1fe2f7d812 90 Pfam PF14043 WVELL protein 3 76 6.5E-40 T 12-10-2018 IPR026952 WVELL protein BEN31_02070 843ce7faa2b04e940222ac665a9a9f3c 87 Gene3D G3DSA:1.10.260.40 3 86 1.1E-11 T 12-10-2018 BEN31_02070 843ce7faa2b04e940222ac665a9a9f3c 87 SUPERFAMILY SSF47413 5 66 2.37E-10 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_02070 843ce7faa2b04e940222ac665a9a9f3c 87 SMART SM00530 5 61 1.2E-7 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_02070 843ce7faa2b04e940222ac665a9a9f3c 87 Pfam PF01381 Helix-turn-helix 6 61 9.3E-10 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_02135 f4cb2458e64c7d978b9d738e113b6d75 151 ProDom PD033466 XKDJ PHAGE PHAGE-LIKE PBSX RELATED LIN1276 ELEMENT YQBJ 1 145 1.0E-37 T 12-10-2018 BEN31_15850 b8cdbf86e1968b74d2d48df4316d4142 68 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 59 3.7E-30 T 12-10-2018 IPR009296 Protein of unknown function DUF951 BEN31_15850 b8cdbf86e1968b74d2d48df4316d4142 68 PIRSF PIRSF037263 1 66 5.7E-35 T 12-10-2018 IPR009296 Protein of unknown function DUF951 BEN31_16555 bac607ef85dcfd93559181794aeda139 218 Gene3D G3DSA:3.40.50.880 1 218 4.9E-72 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_16555 bac607ef85dcfd93559181794aeda139 218 SUPERFAMILY SSF52317 1 217 8.79E-63 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_16555 bac607ef85dcfd93559181794aeda139 218 Pfam PF01965 DJ-1/PfpI family 26 215 1.9E-12 T 12-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 BEN31_01795 8833bc57917bac423b946c24cf5c9b5e 159 PIRSF PIRSF019239 1 159 1.5E-47 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BEN31_01795 8833bc57917bac423b946c24cf5c9b5e 159 Pfam PF01899 Na+/H+ ion antiporter subunit 9 156 6.4E-43 T 12-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 BEN31_10795 2dddd45135488699c952691eeca2e8f4 78 SMART SM00914 34 70 3.2E-11 T 12-10-2018 IPR014957 IDEAL domain BEN31_10795 2dddd45135488699c952691eeca2e8f4 78 Gene3D G3DSA:4.10.810.10 26 77 9.0E-8 T 12-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 BEN31_10795 2dddd45135488699c952691eeca2e8f4 78 Pfam PF08858 IDEAL domain 34 70 1.9E-12 T 12-10-2018 IPR014957 IDEAL domain BEN31_04045 8d7e0fa52a8ee5f16171cc13b4d00cfa 152 SUPERFAMILY SSF50346 82 128 4.71E-5 T 12-10-2018 IPR011033 PRC-barrel-like superfamily BEN31_14065 993c36328ead5823cb98261cf00fe7fb 198 Pfam PF09347 Domain of unknown function (DUF1989) 6 172 1.1E-52 T 12-10-2018 IPR018959 Protein of unknown function DUF1989 BEN31_04590 f9640a5d3f30c4d05ee34a5c9fb1a3ab 309 Pfam PF02690 Na+/Pi-cotransporter 13 146 4.1E-34 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BEN31_04590 f9640a5d3f30c4d05ee34a5c9fb1a3ab 309 Pfam PF02690 Na+/Pi-cotransporter 159 259 6.0E-16 T 12-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 BEN31_04590 f9640a5d3f30c4d05ee34a5c9fb1a3ab 309 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 306 2.7E-103 T 12-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 BEN31_07125 de21540c7a12dd2401f6c5cbaa0b1224 420 Pfam PF03611 PTS system sugar-specific permease component 8 403 2.5E-140 T 12-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 BEN31_16480 733a1a511f8036c71fe87baadfd3ed9b 235 Gene3D G3DSA:3.40.50.150 6 230 5.4E-34 T 12-10-2018 BEN31_16480 733a1a511f8036c71fe87baadfd3ed9b 235 Pfam PF13649 Methyltransferase domain 48 142 6.6E-12 T 12-10-2018 BEN31_16480 733a1a511f8036c71fe87baadfd3ed9b 235 SUPERFAMILY SSF53335 7 221 3.03E-27 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_08860 59aa7d1375395353eb47102854a7b8a8 121 Pfam PF08868 YugN-like family 8 94 4.2E-13 T 12-10-2018 IPR014967 Uncharacterised protein family, YugN-like BEN31_08860 59aa7d1375395353eb47102854a7b8a8 121 Gene3D G3DSA:3.30.310.100 1 121 2.5E-45 T 12-10-2018 IPR036491 YugN-like superfamily BEN31_08860 59aa7d1375395353eb47102854a7b8a8 121 SUPERFAMILY SSF160755 2 114 5.75E-39 T 12-10-2018 IPR036491 YugN-like superfamily BEN31_08155 2e78d551b9e22c85c721cb804d77785c 71 Pfam PF06289 Flagellar protein (FlbD) 1 58 4.7E-27 T 12-10-2018 IPR009384 Swarming motility protein SwrD-like BEN31_06640 5272009759213209d908aec01f111b5e 215 Pfam PF13460 NAD(P)H-binding 7 191 1.4E-46 T 12-10-2018 IPR016040 NAD(P)-binding domain BEN31_06640 5272009759213209d908aec01f111b5e 215 SUPERFAMILY SSF51735 1 203 1.3E-40 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_06640 5272009759213209d908aec01f111b5e 215 Gene3D G3DSA:3.40.50.720 1 215 5.5E-57 T 12-10-2018 BEN31_08645 8aca4e5b4044e353a4f9e416bd9ba827 143 Pfam PF06923 Glucitol operon activator protein (GutM) 4 114 4.0E-26 T 12-10-2018 IPR009693 Glucitol operon activator BEN31_04845 55d99e619e4a6b8ba713f4fda3ef9df0 163 Pfam PF02618 YceG-like family 102 162 8.4E-8 T 12-10-2018 IPR003770 Endolytic murein transglycosylase BEN31_04845 55d99e619e4a6b8ba713f4fda3ef9df0 163 Gene3D G3DSA:1.10.8.1150 96 163 2.1E-14 T 12-10-2018 BEN31_00890 dfe87c6d5cdd29acc2001c4822690236 207 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 6 183 3.3E-33 T 12-10-2018 IPR006490 Phage major tail protein, phi13 family BEN31_04175 69bc5080e63739f3b070784a1dd12dd7 307 Gene3D G3DSA:3.40.50.1100 10 299 9.3E-113 T 12-10-2018 BEN31_04175 69bc5080e63739f3b070784a1dd12dd7 307 Gene3D G3DSA:3.40.50.1100 45 146 9.3E-113 T 12-10-2018 BEN31_04175 69bc5080e63739f3b070784a1dd12dd7 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 12-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 BEN31_04175 69bc5080e63739f3b070784a1dd12dd7 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 292 2.6E-65 T 12-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme BEN31_04175 69bc5080e63739f3b070784a1dd12dd7 307 SUPERFAMILY SSF53686 3 300 4.58E-91 T 12-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme BEN31_03950 7d3fd64afe85d5ed98c3e81b3e96600d 98 Pfam PF13797 Post-transcriptional regulator 8 87 4.7E-30 T 12-10-2018 IPR025716 Post-transcriptional regulator BEN31_16005 8c7153c696e71db4c6566f9327ac4997 318 Pfam PF16226 Domain of unknown function (DUF4885) 7 316 6.2E-104 T 12-10-2018 IPR032617 Protein of unknown function DUF4885 BEN31_02465 bee9324a7081fea398e04cecd6a8b77f 52 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 47 2.7E-16 T 12-10-2018 IPR011437 Domain of unknown function DUF1540 BEN31_07815 c8bdc18b88d0733bbc173a1ac36f45a5 303 Pfam PF13413 Helix-turn-helix domain 7 67 7.2E-22 T 12-10-2018 BEN31_07815 c8bdc18b88d0733bbc173a1ac36f45a5 303 SUPERFAMILY SSF47413 2 74 2.14E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_07815 c8bdc18b88d0733bbc173a1ac36f45a5 303 Gene3D G3DSA:1.10.260.40 1 101 1.9E-29 T 12-10-2018 BEN31_07815 c8bdc18b88d0733bbc173a1ac36f45a5 303 Pfam PF13464 Domain of unknown function (DUF4115) 218 279 1.4E-12 T 12-10-2018 IPR025194 Domain of unknown function DUF4115 BEN31_07815 c8bdc18b88d0733bbc173a1ac36f45a5 303 SMART SM00530 7 68 0.0022 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_13000 28ea80dc8777dac0f6b55fae8b4abcec 241 Pfam PF03591 AzlC protein 26 166 1.9E-39 T 12-10-2018 IPR011606 Branched-chain amino acid transport, permease BEN31_13350 d3c5e42bac60653eec49f25d3dbed6b2 93 SUPERFAMILY SSF47598 7 55 1.0E-6 T 12-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 BEN31_13350 d3c5e42bac60653eec49f25d3dbed6b2 93 Gene3D G3DSA:1.10.1220.10 1 93 5.9E-35 T 12-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 BEN31_01300 60b57118f294585671896b2e4d12d7c9 115 Pfam PF07875 Coat F domain 23 85 4.6E-22 T 12-10-2018 IPR012851 Spore coat protein CotF-like BEN31_05085 0070528b1d5bc30a472322d055cda0e8 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 2.0E-65 T 12-10-2018 IPR014198 Stage III sporulation protein AB BEN31_05085 0070528b1d5bc30a472322d055cda0e8 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 2.5E-53 T 12-10-2018 IPR014198 Stage III sporulation protein AB BEN31_05085 0070528b1d5bc30a472322d055cda0e8 171 PIRSF PIRSF021435 1 171 7.3E-64 T 12-10-2018 IPR014198 Stage III sporulation protein AB BEN31_18500 a4e6505d6ec86f52f6002e9cb11d00a1 128 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 3 114 1.8E-27 T 12-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV BEN31_10615 15b8060a3d807fc6d1fd9a9dbaabc6e6 175 ProDom PD106196 YISN IG BH1722 3 169 5.0E-30 T 12-10-2018 IPR024488 Protein of unknown function DUF2777 BEN31_10615 15b8060a3d807fc6d1fd9a9dbaabc6e6 175 Pfam PF10949 Protein of unknown function (DUF2777) 2 171 8.6E-53 T 12-10-2018 IPR024488 Protein of unknown function DUF2777 BEN31_11205 513b9e9a41e86db9137f464870aeadf5 82 Pfam PF14148 YhdB-like protein 1 70 9.8E-40 T 12-10-2018 IPR025431 YhdB-like protein BEN31_17810 732c9ecad667ec422131673c900869e0 279 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 12-10-2018 IPR019776 Flagellar basal body rod protein, conserved site BEN31_17810 732c9ecad667ec422131673c900869e0 279 Pfam PF00460 Flagella basal body rod protein 5 35 1.1E-13 T 12-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 BEN31_17810 732c9ecad667ec422131673c900869e0 279 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 198 273 3.5E-16 T 12-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain BEN31_17810 732c9ecad667ec422131673c900869e0 279 SUPERFAMILY SSF117143 123 236 4.84E-6 T 12-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like BEN31_02105 06e994661483205ccaecbbe7648fe7c4 485 PIRSF PIRSF019260 4 484 2.0E-162 T 12-10-2018 IPR016753 Phage portal protein PBSX family, Firmicutes BEN31_02105 06e994661483205ccaecbbe7648fe7c4 485 Pfam PF04860 Phage portal protein 121 445 2.2E-14 T 12-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BEN31_02105 06e994661483205ccaecbbe7648fe7c4 485 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 32 405 1.0E-116 T 12-10-2018 IPR006430 Phage portal protein PBSX family BEN31_08955 018557cd3b72537070c2d1fe96082655 59 Pfam PF17259 Family of unknown function (DUF5325) 1 55 6.0E-18 T 12-10-2018 IPR035211 Protein of unknown function DUF5325 BEN31_08955 018557cd3b72537070c2d1fe96082655 59 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 1 56 9.0E-4 T 12-10-2018 IPR035211 Protein of unknown function DUF5325 BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 Gene3D G3DSA:3.40.47.10 1 254 4.6E-106 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 Gene3D G3DSA:3.40.47.10 256 400 2.3E-58 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 SMART SM00825 Beta-ketoacyl synthase 6 413 4.1E-17 T 12-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 SUPERFAMILY SSF53901 4 251 6.06E-74 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 PIRSF PIRSF000447 1 413 4.0E-190 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 SUPERFAMILY SSF53901 214 411 1.59E-77 T 12-10-2018 IPR016039 Thiolase-like GO:0003824 BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 5.3E-202 T 12-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 12-10-2018 IPR018201 Beta-ketoacyl synthase, active site BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 1.3E-60 T 12-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal BEN31_10370 7ebd6ca7622e08f130f62642b57e0659 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 1.7E-41 T 12-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal BEN31_10485 8575e8b1a8c8ab02424e5cf334ce43fe 63 Pfam PF12758 Protein of unknown function (DUF3813) 2 63 3.4E-26 T 12-10-2018 IPR024217 Protein of unknown function DUF3813 BEN31_16545 355d11308c352a319721b3358d8bf915 84 Pfam PF10552 ORF6C domain 35 70 3.0E-5 T 12-10-2018 IPR018878 ORF6C domain BEN31_04965 0d6a5a8543eb06ad2f06720882bd5e8c 127 Pfam PF14173 ComG operon protein 7 30 124 5.0E-22 T 12-10-2018 IPR020372 Competence operon G protein 7, ComGG BEN31_02615 e000fb6aee90ff9dddedc8f6254e9efc 359 Pfam PF10776 Protein of unknown function (DUF2600) 20 348 6.3E-154 T 12-10-2018 IPR019712 Protein of unknown function DUF2600 BEN31_01515 069417bf54550d38847b7c39c4c4914c 144 Pfam PF01934 Protein of unknown function DUF86 10 126 4.0E-18 T 12-10-2018 IPR008201 Protein of unknown function DUF86 BEN31_01515 069417bf54550d38847b7c39c4c4914c 144 Gene3D G3DSA:1.20.120.580 1 144 1.2E-55 T 12-10-2018 IPR037038 Bsu32300-like superfamily BEN31_15685 c6de2baf7e4f1d42d5cff26b301df4a2 196 Gene3D G3DSA:3.40.50.880 1 196 8.0E-71 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_15685 c6de2baf7e4f1d42d5cff26b301df4a2 196 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 185 1.9E-79 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15685 c6de2baf7e4f1d42d5cff26b301df4a2 196 SUPERFAMILY SSF52317 3 189 3.87E-54 T 12-10-2018 IPR029062 Class I glutamine amidotransferase-like BEN31_15685 c6de2baf7e4f1d42d5cff26b301df4a2 196 Pfam PF01174 SNO glutamine amidotransferase family 6 188 1.2E-74 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15685 c6de2baf7e4f1d42d5cff26b301df4a2 196 PIRSF PIRSF005639 1 191 1.8E-71 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15685 c6de2baf7e4f1d42d5cff26b301df4a2 196 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 36.188 T 12-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_15685 c6de2baf7e4f1d42d5cff26b301df4a2 196 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 12-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 BEN31_14010 6a65514567e6b9e385ec451dd944e13d 256 Pfam PF10127 Predicted nucleotidyltransferase 2 248 1.2E-93 T 12-10-2018 IPR018775 Nucleotidyltransferase, predicted BEN31_18385 e42ab420798b508048c86b2001ba5360 296 Pfam PF02687 FtsX-like permease family 199 292 2.0E-7 T 12-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 BEN31_18385 e42ab420798b508048c86b2001ba5360 296 Gene3D G3DSA:3.30.70.3040 47 156 5.6E-10 T 12-10-2018 BEN31_18385 e42ab420798b508048c86b2001ba5360 296 PIRSF PIRSF003097 1 296 2.7E-97 T 12-10-2018 IPR004513 Cell division protein FtsX GO:0016021 BEN31_11040 3c6e733778b3626a98ca18e933007200 377 Pfam PF04286 Protein of unknown function (DUF445) 12 376 7.9E-81 T 12-10-2018 IPR007383 Protein of unknown function DUF445 BEN31_11040 3c6e733778b3626a98ca18e933007200 377 PIRSF PIRSF032178 1 377 2.8E-127 T 12-10-2018 IPR016991 Protein of unknown function UCP032178 BEN31_11380 78ff8851e8b612a1c9730329b8aabcb7 300 Pfam PF12671 Putative amidase domain 137 289 1.3E-40 T 12-10-2018 IPR024301 Putative amidase domain BEN31_18670 cd3c77f036f7c50d0f86af22616098c7 113 SUPERFAMILY SSF101386 1 104 5.4E-24 T 12-10-2018 BEN31_18670 cd3c77f036f7c50d0f86af22616098c7 113 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 102 2.1E-12 T 12-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core BEN31_18670 cd3c77f036f7c50d0f86af22616098c7 113 Gene3D G3DSA:1.10.287.1080 1 102 2.6E-27 T 12-10-2018 BEN31_18670 cd3c77f036f7c50d0f86af22616098c7 113 PIRSF PIRSF036521 1 107 4.0E-49 T 12-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related BEN31_10505 a10fd55bdfe37188e437031c5a045e11 549 Pfam PF00672 HAMP domain 190 238 4.2E-11 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_10505 a10fd55bdfe37188e437031c5a045e11 549 SMART SM00304 190 243 7.7E-10 T 12-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 BEN31_10505 a10fd55bdfe37188e437031c5a045e11 549 SUPERFAMILY SSF58104 215 547 7.59E-63 T 12-10-2018 BEN31_10505 a10fd55bdfe37188e437031c5a045e11 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 475 1.0E-30 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_10505 a10fd55bdfe37188e437031c5a045e11 549 Gene3D G3DSA:1.20.1480.50 150 244 1.4E-16 T 12-10-2018 BEN31_10505 a10fd55bdfe37188e437031c5a045e11 549 SMART SM00283 272 547 1.4E-41 T 12-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 BEN31_10505 a10fd55bdfe37188e437031c5a045e11 549 Gene3D G3DSA:1.10.287.950 245 547 8.0E-58 T 12-10-2018 BEN31_16995 72017a6a60a158be62ad28cea2c3b98c 104 Pfam PF04341 Protein of unknown function, DUF485 13 96 1.5E-24 T 12-10-2018 IPR007436 Protein of unknown function DUF485 BEN31_14240 b78c49e83766aad8a8d1c4dbacb45b9f 391 Pfam PF12679 ABC-2 family transporter protein 4 387 7.0E-33 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BEN31_06265 706fa1d310bdf9782f61f917196bc4e5 60 Pfam PF10782 Zinc-finger 2 57 7.8E-29 T 12-10-2018 IPR019718 Protein of unknown function DUF2602 BEN31_12545 b2da7c56f9272a1561b42f86e70d743c 137 PIRSF PIRSF021389 2 120 1.6E-23 T 12-10-2018 IPR016789 Uncharacterised conserved protein UCP021389 BEN31_12545 b2da7c56f9272a1561b42f86e70d743c 137 Pfam PF10049 Protein of unknown function (DUF2283) 5 54 2.0E-9 T 12-10-2018 IPR019270 Protein of unknown function DUF2283 BEN31_06525 3d1a4fdad2e69b07f287bb02798187b7 67 Pfam PF11755 Protein of unknown function (DUF3311) 10 62 8.1E-18 T 12-10-2018 IPR021741 Protein of unknown function DUF3311 BEN31_06015 7a68ee4542dc297bb3b0acabe2b356de 197 Pfam PF07187 Protein of unknown function (DUF1405) 24 181 5.3E-58 T 12-10-2018 IPR009845 Protein of unknown function DUF1405 BEN31_10335 14bc26eb766977a4ab76ab95de8c4837 250 Pfam PF12227 Protein of unknown function (DUF3603) 35 250 5.3E-111 T 12-10-2018 IPR020909 UPF0736 BEN31_10335 14bc26eb766977a4ab76ab95de8c4837 250 Hamap MF_01860 UPF0736 protein . 1 250 49.293 T 12-10-2018 IPR020909 UPF0736 BEN31_04010 5bf6b9cd3b37fdb131b8f8f42ce55f96 254 Pfam PF00899 ThiF family 6 159 9.7E-37 T 12-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 BEN31_04010 5bf6b9cd3b37fdb131b8f8f42ce55f96 254 Gene3D G3DSA:3.40.50.720 1 254 1.7E-77 T 12-10-2018 BEN31_04010 5bf6b9cd3b37fdb131b8f8f42ce55f96 254 SUPERFAMILY SSF69572 4 244 1.31E-58 T 12-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 BEN31_18035 e58199b68dc01751c9549d3f8678b41f 333 SUPERFAMILY SSF53822 47 321 1.96E-56 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_18035 e58199b68dc01751c9549d3f8678b41f 333 Gene3D G3DSA:3.40.50.2300 149 319 7.0E-64 T 12-10-2018 BEN31_18035 e58199b68dc01751c9549d3f8678b41f 333 Pfam PF13407 Periplasmic binding protein domain 48 303 5.6E-48 T 12-10-2018 IPR025997 Periplasmic binding protein BEN31_18035 e58199b68dc01751c9549d3f8678b41f 333 Gene3D G3DSA:3.40.50.2300 52 311 7.0E-64 T 12-10-2018 BEN31_10865 3f8c4ea06b84ffa29ac6b7af0afd2f4b 769 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 7 170 1.5E-62 T 12-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal BEN31_10865 3f8c4ea06b84ffa29ac6b7af0afd2f4b 769 Pfam PF12698 ABC-2 family transporter protein 23 155 1.1E-14 T 12-10-2018 BEN31_10865 3f8c4ea06b84ffa29ac6b7af0afd2f4b 769 Pfam PF12698 ABC-2 family transporter protein 405 753 6.3E-15 T 12-10-2018 BEN31_10865 3f8c4ea06b84ffa29ac6b7af0afd2f4b 769 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 558 759 1.3E-71 T 12-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal BEN31_12290 4ea1bc27bfff87237289d049e08ec4f8 303 SUPERFAMILY SSF53448 5 278 1.12E-16 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_12290 4ea1bc27bfff87237289d049e08ec4f8 303 Pfam PF03407 Nucleotide-diphospho-sugar transferase 37 198 1.3E-5 T 12-10-2018 IPR005069 Nucleotide-diphospho-sugar transferase BEN31_18080 d512fbfe4f4734818f87bcf2ef7a481b 256 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 230 1.7E-71 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BEN31_18080 d512fbfe4f4734818f87bcf2ef7a481b 256 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 224 4.5E-59 T 12-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 BEN31_18080 d512fbfe4f4734818f87bcf2ef7a481b 256 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 2 239 54.51 T 12-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 BEN31_01120 ba0c12130feb8b4ca577e97223b71538 47 TIGRFAM TIGR02863 spore_sspJ: small, acid-soluble spore protein, SspJ family 1 45 3.0E-15 T 12-10-2018 IPR014220 Small acid-soluble spore protein, SspJ BEN31_01120 ba0c12130feb8b4ca577e97223b71538 47 Pfam PF09575 Small spore protein J (Spore_SspJ) 1 46 4.9E-28 T 12-10-2018 IPR014220 Small acid-soluble spore protein, SspJ BEN31_17175 daca27b848a343c9dadfabec01c692eb 180 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 91 172 1.2E-45 T 12-10-2018 IPR014099 Spore coat protein GerQ BEN31_17175 daca27b848a343c9dadfabec01c692eb 180 PIRSF PIRSF038931 14 180 4.5E-51 T 12-10-2018 IPR014099 Spore coat protein GerQ BEN31_17175 daca27b848a343c9dadfabec01c692eb 180 Pfam PF09671 Spore coat protein (Spore_GerQ) 93 168 4.0E-40 T 12-10-2018 IPR014099 Spore coat protein GerQ BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 Pfam PF13416 Bacterial extracellular solute-binding protein 58 359 4.1E-53 T 12-10-2018 IPR006059 Bacterial extracellular solute-binding protein BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 SUPERFAMILY SSF53850 48 412 6.62E-92 T 12-10-2018 BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 Gene3D G3DSA:3.40.190.10 59 374 6.0E-112 T 12-10-2018 BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 Gene3D G3DSA:3.40.190.10 150 407 6.0E-112 T 12-10-2018 BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 PRINTS PR00181 Maltose binding protein signature 81 99 2.6E-6 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 PRINTS PR00181 Maltose binding protein signature 141 160 2.6E-6 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 PRINTS PR00181 Maltose binding protein signature 162 181 2.6E-6 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 PRINTS PR00181 Maltose binding protein signature 316 337 2.6E-6 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BEN31_16400 722d7c68e60ef6d91a8bef644459cb0e 421 PRINTS PR00181 Maltose binding protein signature 374 393 2.6E-6 T 12-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 BEN31_09405 c3c522cbcd60673fefa791cbba341b59 217 Pfam PF07486 Cell Wall Hydrolase 118 215 1.9E-27 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BEN31_09405 c3c522cbcd60673fefa791cbba341b59 217 Gene3D G3DSA:2.40.10.420 182 216 1.2E-15 T 12-10-2018 BEN31_09405 c3c522cbcd60673fefa791cbba341b59 217 Gene3D G3DSA:1.10.10.2520 102 180 1.7E-28 T 12-10-2018 BEN31_01440 4f7650f5d861439fd3316db648421340 345 Gene3D G3DSA:1.10.3470.10 19 345 1.7E-96 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01440 4f7650f5d861439fd3316db648421340 345 Pfam PF01032 FecCD transport family 35 340 1.7E-87 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_01440 4f7650f5d861439fd3316db648421340 345 SUPERFAMILY SSF81345 14 341 2.62E-83 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_10400 0af257687a46ff0e8848079d957b34bd 246 Gene3D G3DSA:3.40.50.1820 18 242 3.7E-8 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_10400 0af257687a46ff0e8848079d957b34bd 246 SUPERFAMILY SSF53474 53 242 1.36E-9 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_07595 5fdcb2d69b751e8a4272fcc2070a03f6 640 Pfam PF04740 LXG domain of WXG superfamily 2 201 9.8E-49 T 12-10-2018 IPR006829 LXG domain BEN31_07595 5fdcb2d69b751e8a4272fcc2070a03f6 640 Pfam PF13930 DNA/RNA non-specific endonuclease 498 623 1.8E-40 T 12-10-2018 BEN31_18075 ec5c42f25fe4172e815ba8c362c63aeb 394 Gene3D G3DSA:3.40.50.11820 36 204 7.8E-19 T 12-10-2018 BEN31_18075 ec5c42f25fe4172e815ba8c362c63aeb 394 Gene3D G3DSA:3.40.50.12580 205 369 2.2E-41 T 12-10-2018 BEN31_18075 ec5c42f25fe4172e815ba8c362c63aeb 394 SUPERFAMILY SSF53756 88 384 2.77E-24 T 12-10-2018 BEN31_18075 ec5c42f25fe4172e815ba8c362c63aeb 394 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 34 382 1.0E-78 T 12-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 BEN31_05710 6739e9e96477835b930949e4555f495c 392 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 49 392 1.4E-75 T 12-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 BEN31_05710 6739e9e96477835b930949e4555f495c 392 Pfam PF01578 Cytochrome C assembly protein 73 190 1.0E-9 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BEN31_05710 6739e9e96477835b930949e4555f495c 392 Pfam PF01578 Cytochrome C assembly protein 266 389 8.6E-25 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BEN31_03620 f5a0d141a08e06bb6f9e468135071a04 140 Pfam PF06803 Protein of unknown function (DUF1232) 57 93 7.5E-14 T 12-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 BEN31_03620 f5a0d141a08e06bb6f9e468135071a04 140 PIRSF PIRSF031804 1 122 1.8E-38 T 12-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 BEN31_15750 e1033a31357224a8c6cef82f65e929c5 81 Pfam PF04025 Domain of unknown function (DUF370) 3 72 1.3E-13 T 12-10-2018 IPR007169 Extracellular matrix regulatory protein A BEN31_03540 3845efc657f15d18e1b99439658703b8 438 TIGRFAM TIGR00784 citMHS: citrate transporter 2 437 1.7E-194 T 12-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 BEN31_03540 3845efc657f15d18e1b99439658703b8 438 Pfam PF03600 Citrate transporter 13 383 1.2E-47 T 12-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 BEN31_01885 b5e85637e002e3801ce822906018dbab 130 Gene3D G3DSA:2.30.30.430 1 125 9.8E-50 T 12-10-2018 IPR038080 Kinase associated protein B superfamily BEN31_01885 b5e85637e002e3801ce822906018dbab 130 SMART SM01298 14 126 2.5E-73 T 12-10-2018 IPR014916 Kinase associated protein B BEN31_01885 b5e85637e002e3801ce822906018dbab 130 SUPERFAMILY SSF141251 4 125 4.58E-52 T 12-10-2018 IPR038080 Kinase associated protein B superfamily BEN31_01885 b5e85637e002e3801ce822906018dbab 130 Pfam PF08810 Kinase associated protein B 14 125 5.6E-48 T 12-10-2018 IPR014916 Kinase associated protein B BEN31_15315 53e51c0076880847f1439a8c080a9e5e 282 Gene3D G3DSA:3.30.470.10 1 118 9.2E-30 T 12-10-2018 BEN31_15315 53e51c0076880847f1439a8c080a9e5e 282 ProSitePatterns PS00770 Aminotransferases class-IV signature. 179 208 - T 12-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 BEN31_15315 53e51c0076880847f1439a8c080a9e5e 282 Gene3D G3DSA:3.20.10.10 125 277 2.7E-40 T 12-10-2018 BEN31_15315 53e51c0076880847f1439a8c080a9e5e 282 SUPERFAMILY SSF56752 1 263 1.1E-64 T 12-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 BEN31_15315 53e51c0076880847f1439a8c080a9e5e 282 Pfam PF01063 Amino-transferase class IV 29 253 1.2E-48 T 12-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 BEN31_03625 271d7f120baab39129b16f2d6b62c4bd 347 Gene3D G3DSA:2.130.10.10 4 347 3.1E-123 T 12-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 BEN31_03625 271d7f120baab39129b16f2d6b62c4bd 347 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 345 4.1E-127 T 12-10-2018 IPR019405 Lactonase, 7-bladed beta propeller BEN31_03625 271d7f120baab39129b16f2d6b62c4bd 347 SUPERFAMILY SSF51004 11 347 1.96E-47 T 12-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily BEN31_00485 5621fabf7e84749aa4a25e5e701e34e6 340 Gene3D G3DSA:3.90.550.10 1 203 9.1E-53 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_00485 5621fabf7e84749aa4a25e5e701e34e6 340 SUPERFAMILY SSF53448 2 231 1.13E-55 T 12-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases BEN31_00485 5621fabf7e84749aa4a25e5e701e34e6 340 Pfam PF00535 Glycosyl transferase family 2 5 144 2.2E-33 T 12-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 BEN31_11700 0f6be2f6f0fcf0f447ffc1432af1ca86 73 Pfam PF12645 Helix-turn-helix domain 13 51 1.0E-4 T 12-10-2018 IPR024760 Helix-turn-helix, conjugative transposon-like BEN31_14660 43c67733993aab2c74efec7c0ed220ca 118 PIRSF PIRSF033199 1 116 8.6E-59 T 12-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 BEN31_14660 43c67733993aab2c74efec7c0ed220ca 118 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 5 115 6.9E-54 T 12-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 BEN31_14660 43c67733993aab2c74efec7c0ed220ca 118 Gene3D G3DSA:1.10.8.290 1 118 1.1E-54 T 12-10-2018 IPR023204 SP1917 domain superfamily BEN31_00395 0b8cfcc0626e2e346057e8489650d7d8 309 SUPERFAMILY SSF161098 93 289 1.18E-14 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00395 0b8cfcc0626e2e346057e8489650d7d8 309 Gene3D G3DSA:1.10.3720.10 83 308 2.8E-17 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_00395 0b8cfcc0626e2e346057e8489650d7d8 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 306 1.8E-33 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_11265 7a99a7889248775db985fb376c94307d 138 SUPERFAMILY SSF54593 9 132 7.84E-23 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_11265 7a99a7889248775db985fb376c94307d 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 127 2.1E-6 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_11265 7a99a7889248775db985fb376c94307d 138 Gene3D G3DSA:3.10.180.10 1 136 3.4E-52 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_09660 e16e31c26d26856d03d05da66d3374d7 156 SUPERFAMILY SSF53927 2 140 1.04E-46 T 12-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 BEN31_09660 e16e31c26d26856d03d05da66d3374d7 156 Gene3D G3DSA:3.40.140.10 1 156 8.0E-69 T 12-10-2018 BEN31_09660 e16e31c26d26856d03d05da66d3374d7 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 101 1.9E-26 T 12-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain BEN31_09660 e16e31c26d26856d03d05da66d3374d7 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 12-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 BEN31_01435 a704729d9b2baffd334c295e09fb9600 338 SUPERFAMILY SSF81345 10 332 1.96E-78 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01435 a704729d9b2baffd334c295e09fb9600 338 Gene3D G3DSA:1.10.3470.10 8 337 2.5E-91 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01435 a704729d9b2baffd334c295e09fb9600 338 Pfam PF01032 FecCD transport family 21 332 1.3E-88 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_11860 78fec7e5697c474b390fdc8257969fdf 200 SUPERFAMILY SSF63817 67 190 2.75E-30 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_11860 78fec7e5697c474b390fdc8257969fdf 200 Gene3D G3DSA:2.40.260.10 25 198 8.7E-33 T 12-10-2018 IPR023365 Sortase domain superfamily BEN31_11860 78fec7e5697c474b390fdc8257969fdf 200 TIGRFAM TIGR01076 sortase_fam: sortase 70 191 9.6E-24 T 12-10-2018 IPR005754 Sortase family BEN31_11860 78fec7e5697c474b390fdc8257969fdf 200 Pfam PF04203 Sortase family 70 186 3.9E-22 T 12-10-2018 IPR005754 Sortase family BEN31_14220 65ed6640fe4fdd6d2ac65cf504de0f22 142 Gene3D G3DSA:1.10.10.2520 8 91 1.3E-12 T 12-10-2018 BEN31_14220 65ed6640fe4fdd6d2ac65cf504de0f22 142 Pfam PF07486 Cell Wall Hydrolase 24 128 6.6E-19 T 12-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 BEN31_01810 221bd3be639eeb79e26fa18f680e8ca7 143 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 11 134 7.0E-35 T 12-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein BEN31_01810 221bd3be639eeb79e26fa18f680e8ca7 143 TIGRFAM TIGR00943 2a6301s02: monovalent cation:proton antiporter 29 135 2.9E-44 T 12-10-2018 IPR005281 Monovalent cation:proton antiporter, subunit B GO:0006812|GO:0008324|GO:0016021 BEN31_00240 f12d255440ed0059378455b9201b80c2 588 Pfam PF17289 Terminase RNaseH-like domain 425 571 8.4E-9 T 12-10-2018 IPR035421 Terminase, large subunit gp17-like BEN31_00240 f12d255440ed0059378455b9201b80c2 588 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 437 572 3.0E-18 T 12-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit BEN31_00240 f12d255440ed0059378455b9201b80c2 588 Gene3D G3DSA:3.30.420.240 410 575 1.3E-8 T 12-10-2018 BEN31_07010 2c94e389f015ae0b2525488cc31e1a4f 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 3.3E-65 T 12-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 BEN31_07010 2c94e389f015ae0b2525488cc31e1a4f 260 SUPERFAMILY SSF52096 11 259 5.76E-83 T 12-10-2018 IPR029045 ClpP/crotonase-like domain superfamily BEN31_07010 2c94e389f015ae0b2525488cc31e1a4f 260 Gene3D G3DSA:1.10.12.10 203 260 3.4E-21 T 12-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal BEN31_07010 2c94e389f015ae0b2525488cc31e1a4f 260 Gene3D G3DSA:3.90.226.10 2 202 1.3E-71 T 12-10-2018 BEN31_07010 2c94e389f015ae0b2525488cc31e1a4f 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 12-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 BEN31_02780 fffd0c103fab623d19c7c84e418afc22 540 PIRSF PIRSF038958 1 540 1.4E-189 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BEN31_02780 fffd0c103fab623d19c7c84e418afc22 540 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 374 522 1.0E-27 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BEN31_02780 fffd0c103fab623d19c7c84e418afc22 540 Pfam PF01943 Polysaccharide biosynthesis protein 5 320 3.4E-62 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BEN31_05840 da130412a6c7b15151bcc0a8927c53af 43 Pfam PF14140 YpzI-like protein 1 42 9.4E-27 T 12-10-2018 IPR025414 YpzI-like protein BEN31_11680 d0699573360b7fd9c98362b9c978b2d0 410 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 6 406 2.1E-75 T 12-10-2018 IPR019117 CRISPR-associated protein, Cmr3 BEN31_11680 d0699573360b7fd9c98362b9c978b2d0 410 TIGRFAM TIGR01888 cas_cmr3: CRISPR type III-B/RAMP module-associated protein Cmr3 6 406 1.5E-50 T 12-10-2018 IPR010165 CRISPR-associated protein, TM1793 BEN31_11605 889cb9f12b300675be70baed9a4e781b 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 1.2E-42 T 12-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 BEN31_11605 889cb9f12b300675be70baed9a4e781b 333 SUPERFAMILY SSF161098 92 319 5.45E-20 T 12-10-2018 IPR035906 MetI-like superfamily BEN31_16950 dc991ab2d04d2a83c09bbedeef768c20 127 Gene3D G3DSA:3.10.180.10 1 127 1.3E-27 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_16950 dc991ab2d04d2a83c09bbedeef768c20 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 1.0E-14 T 12-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain BEN31_16950 dc991ab2d04d2a83c09bbedeef768c20 127 SUPERFAMILY SSF54593 3 126 3.15E-26 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_08810 f5076b878f86a0583e4d55e9965e7794 402 Pfam PF07670 Nucleoside recognition 42 138 2.5E-6 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN31_08810 f5076b878f86a0583e4d55e9965e7794 402 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 8 359 2.0E-124 T 12-10-2018 IPR014226 Sporulation integral membrane protein YlbJ BEN31_14155 22ef9eb83afe1214c22b51b006e142d3 364 Pfam PF05816 Toxic anion resistance protein (TelA) 35 359 1.6E-106 T 12-10-2018 IPR008863 Toxic anion resistance BEN31_14155 22ef9eb83afe1214c22b51b006e142d3 364 PIRSF PIRSF026508 1 364 2.2E-127 T 12-10-2018 IPR008863 Toxic anion resistance BEN31_06085 33d25f3c02fb2775083b0f76f1632902 56 PIRSF PIRSF036698 1 56 8.3E-35 T 12-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA BEN31_06085 33d25f3c02fb2775083b0f76f1632902 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 2.7E-25 T 12-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA BEN31_00495 d389ba88a5b3779ad8e46b5920ede074 504 Pfam PF01943 Polysaccharide biosynthesis protein 8 290 1.3E-12 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BEN31_07470 0c6542160b4c1d1a02fd45b116c7d85a 126 Pfam PF14040 Deoxyribonuclease NucA/NucB 29 116 3.9E-10 T 12-10-2018 IPR029476 Deoxyribonuclease NucA/NucB BEN31_13670 045b8b39977419ec517acb7c27e404ec 97 Pfam PF17247 Family of unknown function (DUF5316) 31 95 1.4E-15 T 12-10-2018 IPR035167 Protein of unknown function DUF5316 BEN31_14020 cda134da2b2652c38e870c41ce97dfd1 318 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 314 1.6E-140 T 12-10-2018 IPR008391 Acetyl xylan esterase BEN31_14020 cda134da2b2652c38e870c41ce97dfd1 318 Gene3D G3DSA:3.40.50.1820 1 317 4.3E-103 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_14020 cda134da2b2652c38e870c41ce97dfd1 318 SUPERFAMILY SSF53474 8 317 4.09E-43 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_12085 b172bb3c77724adeed49b9da2ded0a6a 552 Gene3D G3DSA:3.40.640.10 103 412 2.5E-56 T 12-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 BEN31_12085 b172bb3c77724adeed49b9da2ded0a6a 552 SUPERFAMILY SSF53383 40 541 1.61E-65 T 12-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase BEN31_12085 b172bb3c77724adeed49b9da2ded0a6a 552 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 312 443 3.3E-6 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BEN31_12085 b172bb3c77724adeed49b9da2ded0a6a 552 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 92 295 6.6E-19 T 12-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 BEN31_06685 3d6709b6246d41a4b1a47e405508b058 305 ProSitePatterns PS00161 Isocitrate lyase signature. 126 131 - T 12-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 BEN31_06685 3d6709b6246d41a4b1a47e405508b058 305 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 294 2.5E-120 T 12-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 BEN31_06685 3d6709b6246d41a4b1a47e405508b058 305 SUPERFAMILY SSF51621 11 293 3.45E-92 T 12-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 BEN31_06685 3d6709b6246d41a4b1a47e405508b058 305 Gene3D G3DSA:3.20.20.60 1 301 4.5E-106 T 12-10-2018 BEN31_06685 3d6709b6246d41a4b1a47e405508b058 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 17 257 1.0E-49 T 12-10-2018 BEN31_13005 6152115ea9972a3a7d7ebb14a77b69f3 106 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 3.6E-22 T 12-10-2018 IPR008407 Branched-chain amino acid transport, AzlD BEN31_13980 fa4a075051bac88cfe09aba9ee878745 290 Gene3D G3DSA:3.40.190.10 134 236 2.2E-77 T 12-10-2018 BEN31_13980 fa4a075051bac88cfe09aba9ee878745 290 Gene3D G3DSA:3.40.190.10 46 268 2.2E-77 T 12-10-2018 BEN31_13980 fa4a075051bac88cfe09aba9ee878745 290 SMART SM00062 47 273 3.7E-66 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_13980 fa4a075051bac88cfe09aba9ee878745 290 SUPERFAMILY SSF53850 8 271 1.98E-58 T 12-10-2018 BEN31_13980 fa4a075051bac88cfe09aba9ee878745 290 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 271 2.6E-53 T 12-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF BEN31_14210 4916c9eccab7b404e1b260f8adb245d7 346 Pfam PF01757 Acyltransferase family 6 316 1.2E-25 T 12-10-2018 IPR002656 Acyltransferase 3 GO:0016747 BEN31_06400 23d4921caab0363cb01efba0a8be5d32 221 Pfam PF14344 Domain of unknown function (DUF4397) 29 143 2.8E-20 T 12-10-2018 IPR025510 Domain of unknown function DUF4397 BEN31_00935 75192a3cbab2497abe87dbe4ce07d14a 59 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 7 45 4.3E-11 T 12-10-2018 IPR010022 Protein of unknown function XkdX BEN31_00935 75192a3cbab2497abe87dbe4ce07d14a 59 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 1 43 2.7E-9 T 12-10-2018 IPR010022 Protein of unknown function XkdX BEN31_17650 d770395f94cac1447c872ce6163fd8f4 76 Pfam PF06612 Protein of unknown function (DUF1146) 16 63 2.3E-19 T 12-10-2018 IPR009526 Protein of unknown function DUF1146 BEN31_17650 d770395f94cac1447c872ce6163fd8f4 76 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 9 76 1.5E-22 T 12-10-2018 IPR009526 Protein of unknown function DUF1146 BEN31_10555 088670049184a52306636748e71e5c3b 593 Pfam PF06276 Ferric iron reductase FhuF-like transporter 409 568 4.0E-39 T 12-10-2018 IPR022770 Ferric iron reductase FhuF domain BEN31_10555 088670049184a52306636748e71e5c3b 593 Pfam PF04183 IucA / IucC family 144 378 1.1E-58 T 12-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 BEN31_10555 088670049184a52306636748e71e5c3b 593 Gene3D G3DSA:1.10.510.40 373 573 1.4E-13 T 12-10-2018 BEN31_08750 c7088231ecb9e79529e23cdbdced27e0 115 Hamap MF_00910 Cell division protein FtsL [ftsL]. 34 115 12.674 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BEN31_08750 c7088231ecb9e79529e23cdbdced27e0 115 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 34 113 4.3E-16 T 12-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 BEN31_05690 69b84788a065c6ba8d9d28c050205a28 178 Pfam PF07670 Nucleoside recognition 46 146 8.6E-7 T 12-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 BEN31_00885 4749d21af637cd8d59d8e1fc9ba043a6 122 Pfam PF11367 Protein of unknown function (DUF3168) 9 112 1.3E-9 T 12-10-2018 IPR021508 Tail completion protein BEN31_04755 5a798b130ee86aef6f7a1eb962acd263 286 SUPERFAMILY SSF81345 4 266 4.84E-37 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_04755 5a798b130ee86aef6f7a1eb962acd263 286 Gene3D G3DSA:1.10.3470.10 61 271 4.0E-10 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_04755 5a798b130ee86aef6f7a1eb962acd263 286 Pfam PF00950 ABC 3 transport family 8 268 1.4E-64 T 12-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 BEN31_02155 73cc9d99f36797dae3b895ad863d8c7e 146 Pfam PF08890 Phage XkdN-like tail assembly chaperone protein, TAC 10 145 8.4E-38 T 12-10-2018 IPR014986 Clostridium phage phiCD119, XkdN BEN31_02155 73cc9d99f36797dae3b895ad863d8c7e 146 Gene3D G3DSA:3.30.2220.30 14 134 2.1E-48 T 12-10-2018 IPR038559 Clostridium phage phiCD119, XkdN superfamily BEN31_09070 129ae268dd64aa336529a9a927a09353 92 SMART SM00966 8 51 1.7E-6 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_09070 129ae268dd64aa336529a9a927a09353 92 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 51 1.3E-8 T 12-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 BEN31_09070 129ae268dd64aa336529a9a927a09353 92 SUPERFAMILY SSF89447 2 50 1.55E-13 T 12-10-2018 IPR037914 SpoVT-AbrB domain superfamily BEN31_09070 129ae268dd64aa336529a9a927a09353 92 Gene3D G3DSA:2.10.260.10 1 51 2.2E-21 T 12-10-2018 BEN31_05115 301e63ada37010c50de3728b13464a2d 210 Gene3D G3DSA:3.30.300.270 94 209 2.4E-39 T 12-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily BEN31_05115 301e63ada37010c50de3728b13464a2d 210 Pfam PF12685 SpoIIIAH-like protein 5 201 1.3E-43 T 12-10-2018 IPR024232 Stage III sporulation protein AH-like BEN31_16130 d9c219abdb777932b046a6ba4ff6012d 276 Pfam PF02361 Cobalt transport protein 13 232 1.3E-29 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component BEN31_05205 511edcabde8414838170b46ff57044e2 78 Pfam PF11118 Protein of unknown function (DUF2627) 3 76 2.8E-32 T 12-10-2018 IPR020138 Uncharacterised protein family YqzF BEN31_05205 511edcabde8414838170b46ff57044e2 78 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 4.0E-19 T 12-10-2018 IPR020138 Uncharacterised protein family YqzF BEN31_09245 4f272b5e3a7622e483223e87f6c229d7 171 Pfam PF04308 Ribonuclease H-like 18 171 4.6E-53 T 12-10-2018 IPR007405 Bacteriophage KVP40, Orf299 BEN31_05485 0e643c16ee2c13763683d010d75f94e2 94 Pfam PF12197 Bacillus cereus group antimicrobial protein 55 92 6.3E-16 T 12-10-2018 IPR020976 Antimicrobial peptide, lci BEN31_07825 88f65c5eee2e6949490de6d370a40293 85 Gene3D G3DSA:1.10.760.20 1 82 3.6E-31 T 12-10-2018 IPR038292 YmfJ/YflH superfamily BEN31_07825 88f65c5eee2e6949490de6d370a40293 85 Pfam PF11588 Protein of unknown function (DUF3243) 2 80 1.0E-34 T 12-10-2018 IPR021637 Protein of unknown function DUF3243 BEN31_07825 88f65c5eee2e6949490de6d370a40293 85 PIRSF PIRSF004764 1 85 6.7E-28 T 12-10-2018 IPR024702 Uncharacterised conserved protein YmfJ BEN31_08590 21cc9a216b5798c0f02efc7457e50135 164 Pfam PF05103 DivIVA protein 3 133 2.9E-49 T 12-10-2018 IPR007793 DivIVA family BEN31_08590 21cc9a216b5798c0f02efc7457e50135 164 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 2.5E-16 T 12-10-2018 IPR019933 DivIVA domain BEN31_01495 766a6366a415d4e14572a4a51d28e715 326 SUPERFAMILY SSF51261 122 315 3.56E-34 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_01495 766a6366a415d4e14572a4a51d28e715 326 Pfam PF01551 Peptidase family M23 204 302 7.8E-20 T 12-10-2018 IPR016047 Peptidase M23 BEN31_01495 766a6366a415d4e14572a4a51d28e715 326 Gene3D G3DSA:2.70.70.10 160 326 1.7E-53 T 12-10-2018 IPR011055 Duplicated hybrid motif BEN31_04405 24175fdaefcd6c60a910d19565e56d76 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 2.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_04405 24175fdaefcd6c60a910d19565e56d76 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 2.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_04405 24175fdaefcd6c60a910d19565e56d76 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 2.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_04405 24175fdaefcd6c60a910d19565e56d76 282 PRINTS PR00111 Alpha/beta hydrolase fold signature 223 237 2.0E-6 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_04405 24175fdaefcd6c60a910d19565e56d76 282 SUPERFAMILY SSF53474 6 278 2.68E-51 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_04405 24175fdaefcd6c60a910d19565e56d76 282 Gene3D G3DSA:3.40.50.1820 3 279 8.3E-61 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_04405 24175fdaefcd6c60a910d19565e56d76 282 Pfam PF00561 alpha/beta hydrolase fold 46 264 1.8E-19 T 12-10-2018 IPR000073 Alpha/beta hydrolase fold-1 BEN31_02795 c54d6fcc7f1c5d28011754e4cc97a971 432 PIRSF PIRSF005353 1 432 8.8E-173 T 12-10-2018 IPR026033 Purine permease PbuG-like BEN31_02795 c54d6fcc7f1c5d28011754e4cc97a971 432 Pfam PF00860 Permease family 13 392 8.4E-68 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BEN31_10935 94ac92133c9255b11d79bd4c56b1801c 172 Gene3D G3DSA:1.10.1760.20 1 168 3.2E-6 T 12-10-2018 BEN31_10935 94ac92133c9255b11d79bd4c56b1801c 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 166 8.0E-45 T 12-10-2018 BEN31_10935 94ac92133c9255b11d79bd4c56b1801c 172 Pfam PF17099 Tryptophan transporter TrpP 2 164 2.2E-55 T 12-10-2018 IPR031360 Tryptophan transporter TrpP BEN31_13665 5bad468a3a85d2a0dbac8dff5d443c96 125 SUPERFAMILY SSF54593 1 121 2.55E-31 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_13665 5bad468a3a85d2a0dbac8dff5d443c96 125 Pfam PF12681 Glyoxalase-like domain 3 124 1.8E-30 T 12-10-2018 IPR025870 Glyoxalase-like domain BEN31_13665 5bad468a3a85d2a0dbac8dff5d443c96 125 Gene3D G3DSA:3.10.180.10 1 125 4.8E-32 T 12-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase BEN31_00045 e71a56723c9f7ee6f776f41a2626035e 144 Gene3D G3DSA:3.40.1350.10 4 131 1.4E-5 T 12-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BEN31_00330 d6e27ca61a186b5be8e09309ffc8eb30 486 Pfam PF10651 Domain of unknown function (DUF2479) 6 147 3.8E-27 T 12-10-2018 IPR018913 Domain of unknown function DUF2479 BEN31_12680 6ce6f0fb3f6045ece8ebc19d445a216f 266 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 66 254 1.0E-25 T 12-10-2018 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 SUPERFAMILY SSF117281 27 251 2.03E-46 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 SMART SM00612 245 296 1.1 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 SMART SM00612 198 244 0.23 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 SMART SM00612 100 140 0.15 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 SMART SM00612 52 99 3.9E-9 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 Pfam PF01344 Kelch motif 285 310 1.3E-4 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 Pfam PF01344 Kelch motif 89 129 1.3E-8 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 Pfam PF01344 Kelch motif 194 226 2.8E-6 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 Pfam PF01344 Kelch motif 41 86 4.4E-10 T 12-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 Gene3D G3DSA:2.120.10.80 12 233 2.4E-47 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BEN31_09950 c88e7411f6c47b1f79dfa82ae583d362 497 Gene3D G3DSA:2.120.10.80 234 321 3.4E-10 T 12-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 BEN31_18395 b34a6348f7f5364538a92c0df97b68ac 246 Pfam PF01925 Sulfite exporter TauE/SafE 4 242 9.4E-42 T 12-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 BEN31_17875 7b4d166a2907bb7b2411de4441e9457d 196 Pfam PF02417 Chromate transporter 9 173 1.4E-33 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 BEN31_18000 765fccfea3e39809f6061c3246a55f2d 488 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 15 476 2.5E-172 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_18000 765fccfea3e39809f6061c3246a55f2d 488 PIRSF PIRSF005690 1 488 4.4E-174 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_13515 b9bfc0456f52ef87f255943ef3f5ee5d 608 Gene3D G3DSA:1.20.1740.10 41 466 7.4E-24 T 12-10-2018 BEN31_13515 b9bfc0456f52ef87f255943ef3f5ee5d 608 Pfam PF13520 Amino acid permease 27 446 3.5E-35 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_04775 7a18658f67b0de6ae66335fb4c5342e9 120 Pfam PF06781 Cell division protein CrgA 70 117 2.3E-6 T 12-10-2018 IPR009619 Cell division protein CrgA BEN31_01640 574940d55c9996fd213604abf180193c 442 Pfam PF03553 Na+/H+ antiporter family 150 436 7.9E-70 T 12-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 BEN31_01640 574940d55c9996fd213604abf180193c 442 Pfam PF13726 Na+-H+ antiporter family 2 88 4.8E-31 T 12-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal BEN31_16280 3e8c8acb5fffab978a6eb4dd9084dc0c 160 Pfam PF13826 Domain of unknown function (DUF4188) 18 135 1.6E-45 T 12-10-2018 IPR025444 Monooxygenase af470-like BEN31_15420 eaf358b0121cdb23f0a74b5b9f5990f5 534 PIRSF PIRSF038958 7 521 8.1E-77 T 12-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type BEN31_15420 eaf358b0121cdb23f0a74b5b9f5990f5 534 Pfam PF01943 Polysaccharide biosynthesis protein 12 309 6.9E-40 T 12-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 BEN31_15420 eaf358b0121cdb23f0a74b5b9f5990f5 534 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 505 5.0E-27 T 12-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain BEN31_05675 94a982a4ea9f105fa5a0c87ce5966028 159 Pfam PF13047 Protein of unknown function (DUF3907) 11 153 5.5E-57 T 12-10-2018 IPR025013 Protein of unknown function DUF3907 BEN31_08910 f57bb6ce2358de4ded104fd80e63482c 403 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08910 f57bb6ce2358de4ded104fd80e63482c 403 Pfam PF01098 Cell cycle protein 14 375 1.7E-113 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_08910 f57bb6ce2358de4ded104fd80e63482c 403 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 10 372 4.1E-103 T 12-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_17370 7714168ebf99c8ab9e007a6e2f2aadc6 172 Pfam PF08741 YwhD family 6 167 2.7E-83 T 12-10-2018 IPR014852 Uncharacterised protein YwhD BEN31_17265 c678f4cac43eff86349459c98f9ea02b 200 Gene3D G3DSA:3.40.190.10 112 182 5.0E-6 T 12-10-2018 BEN31_17265 c678f4cac43eff86349459c98f9ea02b 200 SUPERFAMILY SSF53850 22 183 4.34E-10 T 12-10-2018 BEN31_17265 c678f4cac43eff86349459c98f9ea02b 200 Gene3D G3DSA:3.40.190.10 26 111 5.0E-6 T 12-10-2018 BEN31_16650 3444815f0b05f74a5a00e4e7ea37b857 155 SMART SM00530 13 67 9.7E-4 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_16650 3444815f0b05f74a5a00e4e7ea37b857 155 Gene3D G3DSA:1.10.260.40 3 68 4.4E-7 T 12-10-2018 BEN31_16650 3444815f0b05f74a5a00e4e7ea37b857 155 SUPERFAMILY SSF47413 7 61 1.05E-8 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_16650 3444815f0b05f74a5a00e4e7ea37b857 155 Pfam PF01381 Helix-turn-helix 15 45 2.3E-5 T 12-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BEN31_06020 5a230ac9e4eb2eb19fdc24f2696293f1 267 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 31 258 7.1E-88 T 12-10-2018 IPR014231 Sporulation protein YpjB BEN31_06020 5a230ac9e4eb2eb19fdc24f2696293f1 267 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 31 260 1.6E-80 T 12-10-2018 IPR014231 Sporulation protein YpjB BEN31_01805 36de20f49d7b489182b083a46b00987d 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 8.7E-30 T 12-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like BEN31_07295 d73e0c099bdc3522417991326fecb4c6 181 Gene3D G3DSA:3.40.800.10 1 174 2.7E-20 T 12-10-2018 BEN31_07295 d73e0c099bdc3522417991326fecb4c6 181 SUPERFAMILY SSF52768 1 177 1.98E-21 T 12-10-2018 IPR023696 Ureohydrolase domain superfamily BEN31_07295 d73e0c099bdc3522417991326fecb4c6 181 Pfam PF00491 Arginase family 1 124 1.6E-8 T 12-10-2018 IPR006035 Ureohydrolase GO:0046872 BEN31_01220 e2517dc849f7461212bbad7c548a5386 254 PIRSF PIRSF031509 3 254 7.1E-59 T 12-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 BEN31_01220 e2517dc849f7461212bbad7c548a5386 254 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 139 251 3.2E-36 T 12-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF BEN31_18560 cb36e757d2a63f03ff6a58a7341efa7c 264 PIRSF PIRSF032442 13 264 8.3E-75 T 12-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 BEN31_18560 cb36e757d2a63f03ff6a58a7341efa7c 264 Pfam PF13529 Peptidase_C39 like family 75 236 3.4E-36 T 12-10-2018 IPR039564 Peptidase C39-like BEN31_18560 cb36e757d2a63f03ff6a58a7341efa7c 264 Gene3D G3DSA:3.90.70.10 70 264 5.0E-64 T 12-10-2018 BEN31_13960 95f59e31b914c0720c6f3f10e43d1275 268 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 33 262 3.2E-76 T 12-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 BEN31_13960 95f59e31b914c0720c6f3f10e43d1275 268 SUPERFAMILY SSF110710 1 263 1.94E-90 T 12-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like BEN31_11445 af32e08f296be3d69be5066f053ddb19 267 Pfam PF10020 Uncharacterized protein conserved in bacteria (DUF2262) 126 265 1.5E-43 T 12-10-2018 IPR019260 Domain of unknown function DUF2262 BEN31_06270 3515a8202a5262a1e8233b5508f7642e 60 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 60 1.0E-20 T 12-10-2018 BEN31_14885 04b8a939ce6cd279241262531f112126 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 38.882 T 12-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 BEN31_14885 04b8a939ce6cd279241262531f112126 265 Pfam PF02361 Cobalt transport protein 14 237 7.2E-58 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component BEN31_10285 2a8203e062cad1861882ef5a4c0f67e1 221 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 9 182 3.2E-65 T 12-10-2018 IPR022301 Integral membrane protein YjbE BEN31_10285 2a8203e062cad1861882ef5a4c0f67e1 221 Pfam PF03741 Integral membrane protein TerC family 11 181 1.4E-42 T 12-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 BEN31_15995 2801df3f5ff6fdd5a7757c2c24f35308 293 Gene3D G3DSA:3.40.50.1820 26 284 8.2E-67 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_15995 2801df3f5ff6fdd5a7757c2c24f35308 293 Pfam PF00756 Putative esterase 34 261 9.1E-19 T 12-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 BEN31_15995 2801df3f5ff6fdd5a7757c2c24f35308 293 SUPERFAMILY SSF53474 20 278 1.2E-52 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_17225 340bcfcacc89ded391ef340f57da0441 321 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 5 313 8.9E-144 T 12-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 BEN31_17225 340bcfcacc89ded391ef340f57da0441 321 Gene3D G3DSA:3.90.25.10 193 313 9.7E-123 T 12-10-2018 BEN31_17225 340bcfcacc89ded391ef340f57da0441 321 SUPERFAMILY SSF51735 2 315 2.2E-91 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_17225 340bcfcacc89ded391ef340f57da0441 321 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 307 7.0E-86 T 12-10-2018 IPR016040 NAD(P)-binding domain BEN31_17225 340bcfcacc89ded391ef340f57da0441 321 Gene3D G3DSA:3.40.50.720 5 306 9.7E-123 T 12-10-2018 BEN31_11060 75d53a5e9c11502f4f8e135bb7832af3 291 Gene3D G3DSA:1.10.10.2840 171 289 7.8E-14 T 12-10-2018 BEN31_11060 75d53a5e9c11502f4f8e135bb7832af3 291 Pfam PF13556 PucR C-terminal helix-turn-helix domain 231 285 9.6E-17 T 12-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain BEN31_11060 75d53a5e9c11502f4f8e135bb7832af3 291 SUPERFAMILY SSF46689 232 264 2.51E-5 T 12-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 BEN31_16035 d96ce2350809a565cf0d292a9272119d 377 Pfam PF04235 Protein of unknown function (DUF418) 218 374 5.9E-43 T 12-10-2018 IPR007349 Domain of unknown function DUF418 BEN31_07535 a01a18e8357f5a16601cc6dda031b360 147 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 87 142 3.8E-17 T 12-10-2018 IPR018691 Protein of unknown function DUF2188 BEN31_08060 484e57141862c21abcb5918075f970e1 179 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 1 178 3.0E-27 T 12-10-2018 BEN31_01705 c4e6e7ae3b449679a3adfccd43966029 494 Gene3D G3DSA:3.40.50.1820 44 271 2.7E-33 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_01705 c4e6e7ae3b449679a3adfccd43966029 494 Pfam PF07819 PGAP1-like protein 111 154 1.3E-6 T 12-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 BEN31_01705 c4e6e7ae3b449679a3adfccd43966029 494 SUPERFAMILY SSF53474 44 272 2.51E-26 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_01715 23d2059b79ed06910be086aaee415480 367 Pfam PF01594 AI-2E family transporter 18 348 1.1E-89 T 12-10-2018 IPR002549 Transmembrane protein TqsA-like BEN31_12670 2d044ca3f92c0eefa72dcb7456ed0765 66 Pfam PF14044 NETI protein 9 64 3.5E-28 T 12-10-2018 IPR025930 NETI protein BEN31_08165 727577e8aaef86d45376561146463ffd 148 Pfam PF03963 Flagellar hook capping protein - N-terminal region 6 75 4.0E-23 T 12-10-2018 IPR005648 Flagellar hook capping protein BEN31_00310 f223b31cf55b0906f79a6d39cc2fd990 736 Pfam PF10145 Phage-related minor tail protein 1 102 7.4E-24 T 12-10-2018 IPR010090 Phage tail tape measure protein BEN31_00310 f223b31cf55b0906f79a6d39cc2fd990 736 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 1 208 2.0E-53 T 12-10-2018 IPR010090 Phage tail tape measure protein BEN31_01465 2f406b45c209d87934d9f5f21d572bdd 66 Gene3D G3DSA:2.60.120.10 10 66 1.8E-8 T 12-10-2018 IPR014710 RmlC-like jelly roll fold BEN31_10510 3aa8fd7e5c9aa6813a671f8385e9f00e 325 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 37 319 1.6E-70 T 12-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 BEN31_10510 3aa8fd7e5c9aa6813a671f8385e9f00e 325 Gene3D G3DSA:3.40.50.2300 135 320 2.7E-91 T 12-10-2018 BEN31_10510 3aa8fd7e5c9aa6813a671f8385e9f00e 325 SUPERFAMILY SSF53822 33 274 5.65E-17 T 12-10-2018 IPR028082 Periplasmic binding protein-like I BEN31_10510 3aa8fd7e5c9aa6813a671f8385e9f00e 325 Gene3D G3DSA:3.40.50.2300 38 288 2.7E-91 T 12-10-2018 BEN31_16495 4861c45137eeaf6acc96d85b90285a71 291 Pfam PF01263 Aldose 1-epimerase 3 237 1.7E-24 T 12-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 BEN31_16495 4861c45137eeaf6acc96d85b90285a71 291 SUPERFAMILY SSF74650 2 290 3.52E-50 T 12-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 BEN31_16495 4861c45137eeaf6acc96d85b90285a71 291 Gene3D G3DSA:2.70.98.10 2 291 3.3E-93 T 12-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 BEN31_10365 91c6262e3644a633f9b1eee928582223 264 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 67 260 7.2E-68 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 BEN31_07550 d3d965f98e79224c90b216b0a474766a 231 Pfam PF06912 Protein of unknown function (DUF1275) 14 220 6.8E-38 T 12-10-2018 IPR010699 Protein of unknown function DUF1275 BEN31_08945 f2ab79828de73641a33a89aabf1471f6 93 Pfam PF14036 YlaH-like protein 7 82 1.2E-30 T 12-10-2018 IPR025620 YlaH-like protein BEN31_04205 a23d39a369625d57b0e55462d01cc653 257 SUPERFAMILY SSF53335 32 254 1.79E-40 T 12-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase BEN31_04205 a23d39a369625d57b0e55462d01cc653 257 Gene3D G3DSA:3.40.50.150 25 255 6.4E-55 T 12-10-2018 BEN31_04205 a23d39a369625d57b0e55462d01cc653 257 Pfam PF08241 Methyltransferase domain 49 143 7.6E-23 T 12-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 BEN31_13870 64997050e408525d920d03e373e53a94 177 Pfam PF01944 Stage II sporulation protein M 19 174 9.5E-16 T 12-10-2018 IPR002798 Stage II sporulation protein M-like BEN31_10155 02c699db940c47d8ca28a46259d60a80 168 Pfam PF07552 Spore Coat Protein X and V domain 46 103 5.9E-20 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 BEN31_10155 02c699db940c47d8ca28a46259d60a80 168 Pfam PF07552 Spore Coat Protein X and V domain 110 167 4.5E-20 T 12-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 BEN31_08395 4486ee7e2cdfb6b30d2abb7818d94cce 26 Pfam PF08183 Stage V sporulation protein family 1 25 9.3E-18 T 12-10-2018 IPR012609 Sporulation stage V, protein M BEN31_00360 7fcbd91486308d535fac59bcbf712649 102 Pfam PF08863 YolD-like protein 4 97 8.5E-25 T 12-10-2018 IPR014962 YolD-like protein BEN31_01215 51d997fa9cb58662fab1dc4561e4632a 289 Pfam PF13349 Putative adhesin 48 289 6.1E-52 T 12-10-2018 IPR025164 Putative adhesin BEN31_00930 573d479b816a350aa0762db11dd0eb58 99 ProDom PD596757 GP16 LIN0124/LIN2378/LIN2564 1 54 0.003 T 12-10-2018 BEN31_12570 f587f7a71e877a994348e241e97d5c7a 73 Pfam PF11127 Protein of unknown function (DUF2892) 1 70 1.5E-13 T 12-10-2018 IPR021309 Protein of unknown function DUF2892 BEN31_13675 151222214350f285bfb4a58bad452f33 79 Pfam PF10852 Protein of unknown function (DUF2651) 7 74 4.7E-11 T 12-10-2018 IPR020258 Uncharacterised protein family YbeF BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 Pfam PF02040 Arsenical pump membrane protein 6 428 1.2E-248 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 3.0E-113 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_07250 2b0a39d8609fcdee7730589a004c44a7 432 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 6 430 1.7E-225 T 12-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 BEN31_05130 a795d187487fd36e49abc95cd83672f0 135 Pfam PF03780 Asp23 family, cell envelope-related function 16 121 2.7E-36 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 BEN31_01250 cf3c1f7111d034555c692706a0865780 474 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 20 467 1.7E-166 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_01250 cf3c1f7111d034555c692706a0865780 474 PIRSF PIRSF005690 2 473 2.2E-168 T 12-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 BEN31_01285 a688c08ff704ab9d61c231441a3dc132 149 Pfam PF14039 YusW-like protein 49 139 2.1E-24 T 12-10-2018 IPR025623 YusW-like protein BEN31_14310 081af791ad8d76004081225201273f18 460 Gene3D G3DSA:1.20.1740.10 20 459 8.6E-125 T 12-10-2018 BEN31_14310 081af791ad8d76004081225201273f18 460 Pfam PF13520 Amino acid permease 27 427 2.4E-60 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_14310 081af791ad8d76004081225201273f18 460 PIRSF PIRSF006060 11 459 4.6E-87 T 12-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 BEN31_01595 d938c43855f244cdcfe0e566c718a456 298 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 91 290 1.3E-49 T 12-10-2018 IPR018728 Domain of unknown function DUF2268 BEN31_04725 b25ce2894700f485002c71b7eba66892 231 Pfam PF14181 YqfQ-like protein 65 231 4.0E-36 T 12-10-2018 IPR025571 YqfQ-like protein BEN31_17155 a3ee7f0efa3a4f6ad5338c6d335726e9 110 ProDom PD705231 YWDI GROUP-SPECIFIC 1 110 5.0E-22 T 12-10-2018 IPR035218 Protein of unknown function DUF5327 BEN31_17155 a3ee7f0efa3a4f6ad5338c6d335726e9 110 Pfam PF17261 Family of unknown function (DUF5327) 2 110 2.7E-26 T 12-10-2018 IPR035218 Protein of unknown function DUF5327 BEN31_08925 7c2d4cf6fba7b93c09ed8a810969c29f 160 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 3 159 9.0E-43 T 12-10-2018 IPR020229 Uncharacterised protein YlaL BEN31_06665 1c5887f5e907e8a07fa163727c3de1e3 170 SUPERFAMILY SSF55729 106 155 9.8E-5 T 12-10-2018 IPR016181 Acyl-CoA N-acyltransferase BEN31_12305 b73ae141aef4b1f906e2b03a39ead9c8 359 Pfam PF13037 Domain of unknown function (DUF3898) 261 349 1.7E-39 T 12-10-2018 IPR025012 Domain of unknown function DUF3898 BEN31_12305 b73ae141aef4b1f906e2b03a39ead9c8 359 Pfam PF13039 Protein of unknown function (DUF3900) 2 254 2.2E-133 T 12-10-2018 IPR025006 Protein of unknown function DUF3900 BEN31_06670 613a22219e05e702ba22ffe9094c546f 179 Pfam PF04238 Protein of unknown function (DUF420) 46 174 2.9E-46 T 12-10-2018 IPR007352 Protein of unknown function DUF420 BEN31_17870 7b3cbfd563cae5bf6c6fcdd909e59b1c 177 Pfam PF02417 Chromate transporter 6 171 5.5E-36 T 12-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 BEN31_11980 e5c0904a0de4ae5f8b9a06b2b4954931 196 Pfam PF04893 Yip1 domain 14 179 2.8E-12 T 12-10-2018 IPR006977 Yip1 domain GO:0016020 BEN31_00965 b5e9089bee6c4d3d157fbed933e5e289 63 SUPERFAMILY SSF46785 2 52 9.25E-5 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_15580 5f8fee62e6efcdcfdf41f69c2d269888 204 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 9 198 1.4E-59 T 12-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein BEN31_05430 0aa18952f53e54213603ae23e9a97611 114 Pfam PF08863 YolD-like protein 20 111 1.7E-23 T 12-10-2018 IPR014962 YolD-like protein BEN31_18190 c5b70b9ec8675947477cde291ecf7f00 483 Pfam PF13440 Polysaccharide biosynthesis protein 37 326 2.4E-74 T 12-10-2018 BEN31_14225 5e7ad4ba45f6b01007c168c38a7897c1 352 Pfam PF11611 Domain of unknown function (DUF4352) 33 147 4.5E-24 T 12-10-2018 IPR029051 Domain of unknown function DUF4352 BEN31_14225 5e7ad4ba45f6b01007c168c38a7897c1 352 Gene3D G3DSA:2.60.40.1240 34 172 3.1E-16 T 12-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily BEN31_14225 5e7ad4ba45f6b01007c168c38a7897c1 352 Pfam PF17118 Domain of unknown function (DUF5105) 162 350 9.1E-73 T 12-10-2018 IPR031343 Domain of unknown function DUF5105 BEN31_06855 4c8834054c669e78bf352bc74b0ae6be 107 SUPERFAMILY SSF50022 8 106 7.86E-29 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN31_06855 4c8834054c669e78bf352bc74b0ae6be 107 Pfam PF00355 Rieske [2Fe-2S] domain 10 92 4.5E-13 T 12-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 BEN31_06855 4c8834054c669e78bf352bc74b0ae6be 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 103 1.7E-27 T 12-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 BEN31_06855 4c8834054c669e78bf352bc74b0ae6be 107 Gene3D G3DSA:2.102.10.10 3 107 1.1E-24 T 12-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 BEN31_10160 bb44bff764afe009a168150a98876bc9 163 Pfam PF10612 Spore coat protein Z 1 144 7.2E-44 T 12-10-2018 IPR019593 Spore coat protein Z/Y BEN31_06720 4675726a975c1a526041321744321c36 293 SUPERFAMILY SSF55961 3 158 1.28E-7 T 12-10-2018 BEN31_10670 e9f153b0788114dbfd9c59681da2ebcd 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 1.4E-28 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BEN31_05755 2cf6547576e3b3430f52b48e894e51a1 350 PIRSF PIRSF021350 4 350 2.0E-97 T 12-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 BEN31_05755 2cf6547576e3b3430f52b48e894e51a1 350 Pfam PF14493 Helix-turn-helix domain 255 342 2.4E-22 T 12-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 BEN31_12000 eb2a404e471ad5852f0f0d663f2f27f4 260 Pfam PF14167 YfkD-like protein 32 257 7.9E-110 T 12-10-2018 IPR025548 YfkD-like protein BEN31_14600 45a13924b09431e3ecc5bc32dd97c953 252 Pfam PF13349 Putative adhesin 37 219 1.0E-12 T 12-10-2018 IPR025164 Putative adhesin BEN31_04660 5cf40e186b9b864d40e2be9bcb0898e8 47 Pfam PF14006 YqzL-like protein 3 46 2.0E-18 T 12-10-2018 IPR025617 YqzL-like protein BEN31_08190 37481f2442c53796b30250618577efe4 254 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 254 1.4E-107 T 12-10-2018 IPR022524 Flagellar assembly FliH, Bacilli BEN31_08190 37481f2442c53796b30250618577efe4 254 Pfam PF02108 Flagellar assembly protein FliH 115 240 7.7E-14 T 12-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE BEN31_01140 7d24ca542896db2a304e6025b3e4086f 340 SUPERFAMILY SSF81345 6 338 1.31E-87 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01140 7d24ca542896db2a304e6025b3e4086f 340 Gene3D G3DSA:1.10.3470.10 9 340 3.0E-100 T 12-10-2018 IPR037294 ABC transporter, BtuC-like BEN31_01140 7d24ca542896db2a304e6025b3e4086f 340 Pfam PF01032 FecCD transport family 23 338 1.6E-97 T 12-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 BEN31_01730 bb38844249182798280eb396f5f2cfed 82 ProDom PD060056 YUEH 1 82 1.0E-17 T 12-10-2018 IPR020260 Uncharacterised protein family YueH BEN31_01730 bb38844249182798280eb396f5f2cfed 82 Pfam PF14166 YueH-like protein 2 81 6.1E-32 T 12-10-2018 IPR020260 Uncharacterised protein family YueH BEN31_04955 d92b056a7fb0bfe1fed05d7161844439 105 ProDom PD073895 COMPETENCE COMGE LATE MACHINERY MEMBRANE OPERON DNA THE METHYLATION PART 1 99 2.0E-7 T 12-10-2018 IPR020488 Competence operon G, ComGE BEN31_11100 b3f95327a073ffa952285331e42e2d5c 284 SUPERFAMILY SSF88713 83 280 1.51E-48 T 12-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 BEN31_11100 b3f95327a073ffa952285331e42e2d5c 284 Gene3D G3DSA:3.20.20.370 45 282 2.1E-56 T 12-10-2018 BEN31_11100 b3f95327a073ffa952285331e42e2d5c 284 Pfam PF01522 Polysaccharide deacetylase 83 205 7.4E-28 T 12-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 BEN31_02110 c307289c64bea823ae0fd96442d2501b 362 Pfam PF14550 Putative phage serine protease XkdF 41 155 9.6E-45 T 12-10-2018 IPR027924 Phage-like element PBSX protein, XkdF BEN31_03915 8617c46691ff8802008adbaf5de98817 66 Pfam PF11146 Protein of unknown function (DUF2905) 6 62 2.5E-19 T 12-10-2018 IPR021320 Protein of unknown function DUF2905 BEN31_02130 4b6b0339044a28bb470842222cb7e228 165 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 7 92 8.3E-10 T 12-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BEN31_02130 4b6b0339044a28bb470842222cb7e228 165 ProDom PD034535 XKDI PHAGE PHAGE-LIKE PBSX LIN1275 RELATED ELEMENT YQBI 1 159 2.0E-42 T 12-10-2018 BEN31_12385 0a2d3ac279ccb45b1b1f8753f5e9072d 354 SUPERFAMILY SSF52540 4 343 8.26E-31 T 12-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BEN31_12385 0a2d3ac279ccb45b1b1f8753f5e9072d 354 Pfam PF13245 AAA domain 5 183 1.2E-11 T 12-10-2018 BEN31_05530 acd9b72fa162f0cb175385678c168054 75 Pfam PF14004 Protein of unknown function (DUF4227) 6 75 9.4E-33 T 12-10-2018 IPR025321 Protein of unknown function DUF4227 BEN31_10650 3ed260a8040bc3b22702cfb102000df9 77 Pfam PF10803 Spore germination GerPB 1 52 7.8E-29 T 12-10-2018 IPR024255 Spore germination GerPB BEN31_10650 3ed260a8040bc3b22702cfb102000df9 77 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 55 1.0E-19 T 12-10-2018 IPR024255 Spore germination GerPB BEN31_16965 0230c1b942cca9b707ac5b989b39eedb 113 Pfam PF03788 LrgA family 10 99 3.3E-24 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 BEN31_17160 decc91ef2708de621c462eb7d4760fcf 435 Pfam PF00860 Permease family 2 390 1.2E-71 T 12-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 BEN31_11390 255f60adab71b4ef26d592fca44f9210 194 SUPERFAMILY SSF56037 79 185 8.37E-9 T 12-10-2018 BEN31_10170 92a72d6f69b8e479c122ddfb99082fa0 240 Pfam PF14153 Spore coat protein CotO 4 111 2.3E-20 T 12-10-2018 IPR025439 Spore coat protein CotO BEN31_10170 92a72d6f69b8e479c122ddfb99082fa0 240 Pfam PF14153 Spore coat protein CotO 103 240 1.6E-39 T 12-10-2018 IPR025439 Spore coat protein CotO BEN31_02260 72187d8e3bf9860c06237f72878658a7 176 Gene3D G3DSA:2.40.50.140 94 176 1.2E-29 T 12-10-2018 BEN31_16265 75a77dc781eb2fdea82c1b7a0f72658e 226 Pfam PF11368 Protein of unknown function (DUF3169) 4 220 4.9E-22 T 12-10-2018 IPR021509 Protein of unknown function DUF3169 BEN31_00955 1ead36eb7e5c307c250d714c4af01f53 471 SUPERFAMILY SSF53474 13 262 5.85E-11 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_10730 9947c1c9287c06e74be6807d0c090080 217 Pfam PF09335 SNARE associated Golgi protein 53 171 1.8E-22 T 12-10-2018 IPR032816 SNARE associated Golgi protein BEN31_12695 546defc663d94807a85902ec782f95d0 395 Pfam PF07690 Major Facilitator Superfamily 13 316 1.3E-41 T 12-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 BEN31_12695 546defc663d94807a85902ec782f95d0 395 Gene3D G3DSA:1.20.1250.20 3 377 7.0E-50 T 12-10-2018 BEN31_12695 546defc663d94807a85902ec782f95d0 395 SUPERFAMILY SSF103473 5 384 8.63E-62 T 12-10-2018 IPR036259 MFS transporter superfamily BEN31_03065 9748ea6f2da7ca5ba9b0f32acb9c071f 417 Pfam PF01098 Cell cycle protein 295 403 8.3E-20 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_09635 812021c2b3065125135d7e4ce0fea0fa 229 Gene3D G3DSA:3.10.450.40 160 228 1.2E-11 T 12-10-2018 BEN31_09635 812021c2b3065125135d7e4ce0fea0fa 229 Pfam PF03413 Peptidase propeptide and YPEB domain 167 224 5.3E-12 T 12-10-2018 IPR025711 PepSY domain BEN31_05875 ba87ec0960f891fba35f349784979cf2 241 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 21 237 2.0E-77 T 12-10-2018 BEN31_08600 be4d23e8336bf49b6ad46658e5e4f329 93 Pfam PF02325 YGGT family 12 78 9.8E-23 T 12-10-2018 IPR003425 CCB3/YggT GO:0016020 BEN31_08510 6284fe14e793ce87b54cff3a7817dd69 354 Pfam PF01384 Phosphate transporter family 16 305 1.4E-43 T 12-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 BEN31_16920 80907da5d83f620387abab0fade173ce 337 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 328 1.2E-44 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BEN31_14655 58b144a3e05e8007fdf664ae0a283a19 63 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 60 4.7E-13 T 12-10-2018 IPR027379 Cardiolipin synthase N-terminal BEN31_06465 df1fcbbed7d5c8efafea2fef4a38adec 95 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 5 93 2.3E-49 T 12-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU BEN31_06465 df1fcbbed7d5c8efafea2fef4a38adec 95 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 6 53 3.7E-11 T 12-10-2018 IPR022453 Zinc finger, MqsA-type BEN31_06465 df1fcbbed7d5c8efafea2fef4a38adec 95 Pfam PF14122 YokU-like protein, putative antitoxin 5 91 1.2E-42 T 12-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU BEN31_04285 a4ffeb95aad091f3af894c7a921d46ae 118 SUPERFAMILY SSF46785 6 112 7.49E-36 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_04285 a4ffeb95aad091f3af894c7a921d46ae 118 Gene3D G3DSA:1.10.10.10 3 114 1.9E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_04285 a4ffeb95aad091f3af894c7a921d46ae 118 Pfam PF01638 HxlR-like helix-turn-helix 22 111 3.3E-40 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_07270 e335b641746fade683eebb59eb1cc6a1 118 Pfam PF05598 Transposase domain (DUF772) 53 112 8.3E-21 T 12-10-2018 IPR008490 Transposase InsH, N-terminal BEN31_01720 1c1d8daa86f18b6c61abd8e1d77c2031 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 6.1E-27 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BEN31_02275 c819dc54577d70cdeb6ad358dbc12282 384 Pfam PF01098 Cell cycle protein 11 373 9.2E-98 T 12-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_02275 c819dc54577d70cdeb6ad358dbc12282 384 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 332 356 - T 12-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_02275 c819dc54577d70cdeb6ad358dbc12282 384 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 8 374 1.1E-107 T 12-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 BEN31_15135 ca5953733b1f43b8931f365562a4ed18 170 Pfam PF05991 YacP-like NYN domain 4 166 7.4E-57 T 12-10-2018 IPR010298 Protein of unknown function DUF901 BEN31_05250 bbf7e73b398d812481d7444405a65451 97 Pfam PF14150 YesK-like protein 13 87 3.0E-22 T 12-10-2018 IPR025434 YesK-like protein BEN31_02190 789b0b6b4bf78904c7066dbcbd89a5c2 307 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 5 148 6.1E-37 T 12-10-2018 IPR018755 Bacteriophage Mu-like, Gp48 BEN31_02195 f508be20a72440a374f5b81282647277 127 Pfam PF12571 Phage tail-collar fibre protein 5 113 1.3E-8 T 12-10-2018 IPR022225 Phage tail fibre protein BEN31_00350 683bb2b716a6a54419b391c838acdc3a 79 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 5 72 3.5E-25 T 12-10-2018 IPR006479 Holin BEN31_00350 683bb2b716a6a54419b391c838acdc3a 79 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 5 68 4.0E-19 T 12-10-2018 IPR006479 Holin BEN31_00350 683bb2b716a6a54419b391c838acdc3a 79 Pfam PF04688 SPP1 phage holin 5 72 2.8E-21 T 12-10-2018 IPR006479 Holin BEN31_10395 60cda926b9bcd13fe6507cc0e79dce16 191 ProDom PD032558 YJAV MED CDS GENES ARGF 1 126 4.0E-17 T 12-10-2018 BEN31_14630 74a0be4c61f46b198b799e7a7db19bb4 375 Pfam PF04235 Protein of unknown function (DUF418) 225 375 2.0E-39 T 12-10-2018 IPR007349 Domain of unknown function DUF418 BEN31_18415 7e7b6957aff735d45fa742cff2692383 121 SUPERFAMILY SSF46785 10 110 1.18E-33 T 12-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BEN31_18415 7e7b6957aff735d45fa742cff2692383 121 Pfam PF01638 HxlR-like helix-turn-helix 23 111 2.6E-38 T 12-10-2018 IPR002577 Helix-turn-helix, HxlR type BEN31_18415 7e7b6957aff735d45fa742cff2692383 121 Gene3D G3DSA:1.10.10.10 4 119 2.4E-40 T 12-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BEN31_01835 de93bfec77b326b7b31f520dd416ec83 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 329 7.8E-47 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BEN31_00940 58388fdbc3b73566fceb4a1142278c88 139 Pfam PF05105 Bacteriophage holin family 18 125 5.7E-29 T 12-10-2018 IPR006480 Bacteriophage holin family BEN31_00940 58388fdbc3b73566fceb4a1142278c88 139 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 10 134 1.6E-36 T 12-10-2018 IPR006480 Bacteriophage holin family BEN31_00910 a35b89400b27a01ff791e608de8d1c29 277 Pfam PF05709 Phage tail protein 30 276 2.2E-28 T 12-10-2018 IPR008841 Siphovirus-type tail component BEN31_12340 cf486b1e7a7cfb440902a8f63c575a13 215 Pfam PF13021 Domain of unknown function (DUF3885) 171 208 2.9E-18 T 12-10-2018 IPR024976 Domain of unknown function DUF3885 BEN31_10705 d14811eac9e7de6f7ee0ad6f8a1485c1 136 Pfam PF07681 DoxX 9 87 4.5E-19 T 12-10-2018 IPR032808 DoxX family BEN31_10635 32467809e3eaca0bd31a057cc5c1db03 364 Pfam PF08757 CotH kinase protein 47 353 1.1E-87 T 12-10-2018 IPR014867 Spore coat protein CotH BEN31_07370 a32e02108286b4d8be936675e91416dd 41 Pfam PF13040 Fur-regulated basic protein B 2 40 1.4E-15 T 12-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS BEN31_03355 fd9adf8f592650e4ca117af1150faa15 147 Pfam PF03788 LrgA family 21 112 1.1E-23 T 12-10-2018 IPR005538 LrgA/CidA family GO:0016021 BEN31_07635 54a7676ae24e541de0024007daca94f7 205 Gene3D G3DSA:3.90.79.10 1 205 2.2E-60 T 12-10-2018 BEN31_11075 45c0f201445cdb56db14000fd22f10ad 205 SUPERFAMILY SSF51735 1 203 8.08E-24 T 12-10-2018 IPR036291 NAD(P)-binding domain superfamily BEN31_11075 45c0f201445cdb56db14000fd22f10ad 205 Pfam PF13460 NAD(P)H-binding 7 193 1.4E-32 T 12-10-2018 IPR016040 NAD(P)-binding domain BEN31_11075 45c0f201445cdb56db14000fd22f10ad 205 Gene3D G3DSA:3.40.50.720 1 205 3.5E-35 T 12-10-2018 BEN31_10415 2b079453625e63cee7fcaf4a75322ebd 59 Pfam PF14168 YjzC-like protein 1 55 3.6E-27 T 12-10-2018 IPR025549 YjzC-like protein BEN31_01725 533deeb37625e8318ef5ca54be491cd4 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 2.7E-22 T 12-10-2018 IPR019618 Spore germination protein GerPA/GerPF BEN31_18185 38aff610e78c79b0279fd1947209529c 219 Pfam PF02397 Bacterial sugar transferase 34 213 2.9E-66 T 12-10-2018 IPR003362 Bacterial sugar transferase BEN31_18185 38aff610e78c79b0279fd1947209529c 219 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 29 219 4.2E-89 T 12-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase BEN31_09130 326a38f02c6f0333e6a0b174714e8968 208 Pfam PF04893 Yip1 domain 15 192 1.7E-15 T 12-10-2018 IPR006977 Yip1 domain GO:0016020 BEN31_07515 84b53a2d1012a9011b22f6a815997472 238 Pfam PF02754 Cysteine-rich domain 132 215 1.3E-16 T 12-10-2018 IPR004017 Cysteine-rich domain BEN31_07515 84b53a2d1012a9011b22f6a815997472 238 Pfam PF02754 Cysteine-rich domain 3 83 4.2E-19 T 12-10-2018 IPR004017 Cysteine-rich domain BEN31_07515 84b53a2d1012a9011b22f6a815997472 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 62.424 T 12-10-2018 IPR022822 Lactate utilization protein A GO:0006089 BEN31_13645 db9a25ad86f93ff79675560eeaa8877d 405 Pfam PF01566 Natural resistance-associated macrophage protein 52 372 3.5E-20 T 12-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 BEN31_04515 dd87d3b4a4e867edfa8e5e130192bb76 44 Pfam PF14141 YqzM-like protein 2 43 8.4E-25 T 12-10-2018 IPR025416 YqzM-like protein BEN31_12505 19b4b340cd2ed75e76fe4430ec5e3992 326 Pfam PF13529 Peptidase_C39 like family 84 137 2.6E-7 T 12-10-2018 IPR039564 Peptidase C39-like BEN31_17735 d638a682288ea4ca738b777def1f8f1e 184 Pfam PF07291 Methylamine utilisation protein MauE 10 165 6.2E-17 T 12-10-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 BEN31_10140 18b5629bb0bc51e5d8b0cbe728867d82 116 Pfam PF07098 Protein of unknown function (DUF1360) 9 110 5.1E-38 T 12-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 BEN31_16365 01c6358b5e24929cde25845946354be9 317 Pfam PF12679 ABC-2 family transporter protein 4 312 3.0E-19 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BEN31_03710 3ee6699fcc0140ff58b559ceb7110152 276 Pfam PF01578 Cytochrome C assembly protein 67 270 2.3E-35 T 12-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 BEN31_10655 cf76c7afcf8d668906eb97c8e08f4919 204 Pfam PF10737 Spore germination protein GerPC 22 195 4.6E-64 T 12-10-2018 IPR019673 Spore germination protein GerPC BEN31_04795 5462ce0a459c0d110e1601d81d75389f 256 Pfam PF06691 Protein of unknown function (DUF1189) 4 242 9.2E-70 T 12-10-2018 IPR009574 Protein of unknown function DUF1189 BEN31_13530 5937840f8fb1f01f9919cb8dbaff0021 571 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 216 479 1.1E-47 T 12-10-2018 IPR018763 Protein of unknown function DUF2334 BEN31_18755 1e886e9aad7671d77084809abcaf089b 111 Gene3D G3DSA:1.25.40.10 1 111 6.3E-35 T 12-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 BEN31_02630 8dd4df7f755650f0bb3d9b932c24b966 91 Pfam PF10732 Protein of unknown function (DUF2524) 1 84 3.3E-36 T 12-10-2018 IPR019668 Uncharacterised protein family YtzC BEN31_15845 785255b6c7f601706ae74f8e3f9add88 439 SUPERFAMILY SSF53474 115 186 5.44E-7 T 12-10-2018 IPR029058 Alpha/Beta hydrolase fold BEN31_03810 1352d2112fc94ddff287c4214b3cf67d 289 Pfam PF02163 Peptidase family M50 113 169 5.6E-8 T 12-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 BEN31_08385 f0ad45f325616e0bf04bc32e3a8fc805 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 6.9E-36 T 12-10-2018 IPR005531 Alkaline shock protein Asp23 BEN31_05765 0cb04f05f529764be859e77bf0da0631 213 Pfam PF02517 CAAX protease self-immunity 100 181 2.8E-10 T 12-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 BEN31_09225 aaee77f226323a980843071569bbae67 140 Pfam PF14101 Domain of unknown function (DUF4275) 2 132 3.2E-36 T 12-10-2018 IPR025454 Protein of unknown function DUF4275 BEN31_16110 a700eb851bf8c179ec02eda4b37debbc 229 Pfam PF12679 ABC-2 family transporter protein 2 229 1.1E-11 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BEN31_01505 819a138f64780567307d1d6e3f0260f8 211 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 12 177 1.1E-28 T 12-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like BEN31_06145 ab110ee4f1b65c9083186e9d01c411d3 150 Pfam PF14179 YppG-like protein 53 148 6.0E-26 T 12-10-2018 IPR025555 YppG-like protein BEN31_00725 2606f1b531358c7042b6c3c6cd6edb2f 366 SUPERFAMILY SSF47413 10 62 2.91E-5 T 12-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BEN31_16580 378c7930854f92a667f1a3c012997fca 244 Pfam PF02361 Cobalt transport protein 6 217 6.8E-37 T 12-10-2018 IPR003339 ABC/ECF transporter, transmembrane component BEN31_17910 e8301d7962fa8a1059c842a00b104365 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 309 4.6E-53 T 12-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 BEN31_18210 c18f27e8dd6a38f3e974357a9616d5cc 485 Pfam PF04932 O-Antigen ligase 262 410 1.6E-13 T 12-10-2018 IPR007016 O-antigen ligase-related BEN31_16345 8f240324012f56066ed50c706f9efcfc 423 Pfam PF02447 GntP family permease 12 416 1.9E-19 T 12-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 BEN31_04800 fc69f3bb3bd0e61a050f9e79433dd5ec 161 Pfam PF04306 Protein of unknown function (DUF456) 21 158 5.0E-38 T 12-10-2018 IPR007403 Protein of unknown function DUF456 BEN31_01930 8c5ceb9cb87dce1a00b4297195c9502c 78 Pfam PF04070 Domain of unknown function (DUF378) 3 61 4.5E-27 T 12-10-2018 IPR007211 Protein of unknown function DUF378 BEN31_16370 b7058ccfa873ec52fb13b35f17a17d34 142 Pfam PF13273 Protein of unknown function (DUF4064) 4 106 1.8E-17 T 12-10-2018 IPR025273 Domain of unknown function DUF4064 BEN31_02745 7f7744ff9c22465dae99430c021afa8d 227 Pfam PF04854 Protein of unknown function, DUF624 20 96 4.2E-32 T 12-10-2018 IPR006938 Protein of unknown function DUF624 BEN31_07045 1639c98cb89ca54fdc657cd7c7146a9e 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 138 2.3E-32 T 12-10-2018 IPR006750 Putative inner membrane exporter, YdcZ BEN31_11310 d47007dbea35a11f04d43737d33419e1 291 SUPERFAMILY SSF55486 147 282 4.39E-5 T 12-10-2018 BEN31_11660 f223600104b6ad991c90fc054f647ece 326 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 176 9.7E-25 T 12-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase BEN31_13425 2fc0bd465de78c9e4bd61d322f6e0d41 255 Pfam PF12730 ABC-2 family transporter protein 4 183 4.5E-20 T 12-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 BEN31_11995 6167fc083151df68e29fd88c56e58ab2 188 Pfam PF01944 Stage II sporulation protein M 24 180 4.8E-25 T 12-10-2018 IPR002798 Stage II sporulation protein M-like BEN31_18465 0389c3229041d5a3f9fd317728789485 81 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 4 74 1.8E-31 T 12-10-2018 IPR019242 Protein of unknown function DUF2198 BEN31_03120 1ad69f2b6aace0ca41f61fc0c3b62d5b 235 Pfam PF11167 Protein of unknown function (DUF2953) 137 190 3.8E-17 T 12-10-2018 IPR021338 Protein of unknown function DUF2953 BEN31_09730 fec016714c38cb234282b0df1da0339d 162 Pfam PF06695 Putative small multi-drug export protein 20 135 3.5E-14 T 12-10-2018 IPR009577 Putative small multi-drug export BEN31_02185 41eb113f28b362828631f0118b2b0839 349 Pfam PF04865 Baseplate J-like protein 62 306 3.0E-63 T 12-10-2018 IPR006949 Baseplate protein J-like BEN31_12210 e5a1e3deffcca85a785e3e36864754d3 115 Pfam PF11181 Heat induced stress protein YflT 5 104 2.5E-31 T 12-10-2018 IPR025889 General stress protein 17M-like domain