locus-tag class description DKE43_00005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_00005 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DKE43_00010 PF08279 HTH domain DKE43_00010 PF12431 Transcriptional regulator DKE43_00010 PF00072 Response regulator receiver domain DKE43_00015 PF03401 Tripartite tricarboxylate transporter family receptor DKE43_00020 PF03600 Citrate transporter DKE43_00030 PF05870 Phenolic acid decarboxylase (PAD) DKE43_00035 PF10400 Virulence activator alpha C-term DKE43_00035 PF03551 Transcriptional regulator PadR-like family DKE43_00040 PF02898 Nitric oxide synthase, oxygenase domain DKE43_00045 PF00708 Acylphosphatase DKE43_00050 PF03473 MOSC domain DKE43_00050 PF03475 3-alpha domain DKE43_00055 PF11121 Protein of unknown function (DUF2639) DKE43_00060 PF00557 Metallopeptidase family M24 DKE43_00065 PF02378 Phosphotransferase system, EIIC DKE43_00065 PF00367 phosphotransferase system, EIIB DKE43_00070 PF05675 Protein of unknown function (DUF817) DKE43_00080 PF14172 Domain of unknown function (DUF4309) DKE43_00085 PF00884 Sulfatase DKE43_00095 PF00282 Pyridoxal-dependent decarboxylase conserved domain DKE43_00100 PF00672 HAMP domain DKE43_00100 PF02743 Cache domain DKE43_00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_00105 PF09350 Domain of unknown function (DUF1992) DKE43_00110 PF02378 Phosphotransferase system, EIIC DKE43_00110 PF00367 phosphotransferase system, EIIB DKE43_00115 PF00128 Alpha amylase, catalytic domain DKE43_00115 PF16657 Maltogenic Amylase, C-terminal domain DKE43_00120 PF00392 Bacterial regulatory proteins, gntR family DKE43_00120 PF07702 UTRA domain DKE43_00130 PF02872 5'-nucleotidase, C-terminal domain DKE43_00130 PF00149 Calcineurin-like phosphoesterase DKE43_00135 PF01965 DJ-1/PfpI family DKE43_00140 PF06569 Protein of unknown function (DUF1128) DKE43_00145 PF01235 Sodium:alanine symporter family DKE43_00155 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE43_00165 PF03631 Virulence factor BrkB DKE43_00170 PF13302 Acetyltransferase (GNAT) domain DKE43_00175 PF07690 Major Facilitator Superfamily DKE43_00185 PF01699 Sodium/calcium exchanger protein DKE43_00190 PF14167 YfkD-like protein DKE43_00200 PF13732 Domain of unknown function (DUF4162) DKE43_00200 PF00005 ABC transporter DKE43_00220 PF01709 Transcriptional regulator DKE43_00230 PF00924 Mechanosensitive ion channel DKE43_00235 PF08756 YfkB-like domain DKE43_00235 PF04055 Radical SAM superfamily DKE43_00245 PF01522 Polysaccharide deacetylase DKE43_00255 PF01544 CorA-like Mg2+ transporter protein DKE43_00265 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE43_00270 PF01938 TRAM domain DKE43_00270 PF05958 tRNA (Uracil-5-)-methyltransferase DKE43_00280 PF13411 MerR HTH family regulatory protein DKE43_00280 PF07739 TipAS antibiotic-recognition domain DKE43_00285 PF07690 Major Facilitator Superfamily DKE43_00300 PF02824 TGS domain DKE43_00300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKE43_00300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DKE43_00300 PF03129 Anticodon binding domain DKE43_00340 PF00893 Small Multidrug Resistance protein DKE43_00345 PF00893 Small Multidrug Resistance protein DKE43_00350 PF17934 Tetracyclin repressor-like, C-terminal domain DKE43_00350 PF00440 Bacterial regulatory proteins, tetR family DKE43_00365 PF00657 GDSL-like Lipase/Acylhydrolase DKE43_00370 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_00375 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DKE43_00385 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_00385 PF00107 Zinc-binding dehydrogenase DKE43_00390 PF12867 DinB superfamily DKE43_00400 PF01047 MarR family DKE43_00405 PF09924 Uncharacterised conserved protein (DUF2156) DKE43_00405 PF03706 Lysylphosphatidylglycerol synthase TM region DKE43_00420 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_00425 PF00881 Nitroreductase family DKE43_00440 PF08338 Domain of unknown function (DUF1731) DKE43_00440 PF01370 NAD dependent epimerase/dehydratase family DKE43_00445 PF02631 RecX family DKE43_00450 PF08838 Protein of unknown function (DUF1811) DKE43_00460 PF08176 Small acid-soluble spore protein K family DKE43_00465 PF14043 WVELL protein DKE43_00470 PF00535 Glycosyl transferase family 2 DKE43_00475 PF09586 Bacterial membrane protein YfhO DKE43_00490 PF00190 Cupin DKE43_00495 PF12841 YvrJ protein family DKE43_00500 PF04545 Sigma-70, region 4 DKE43_00510 PF04307 LexA-binding, inner membrane-associated putative hydrolase DKE43_00515 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE43_00515 PF14815 NUDIX domain DKE43_00530 PF04259 Small, acid-soluble spore protein, gamma-type DKE43_00540 PF04167 Protein of unknown function (DUF402) DKE43_00545 PF00664 ABC transporter transmembrane region DKE43_00545 PF00005 ABC transporter DKE43_00550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_00550 PF00005 ABC transporter DKE43_00555 PF00005 ABC transporter DKE43_00555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_00560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKE43_00575 PF06081 Aromatic acid exporter family member 1 DKE43_00580 PF00202 Aminotransferase class-III DKE43_00585 PF00578 AhpC/TSA family DKE43_00590 PF01475 Ferric uptake regulator family DKE43_00595 PF11023 Zinc-ribbon containing domain DKE43_00600 PF18576 Helix-turn-helix domain DKE43_00600 PF14540 Nucleotidyltransferase-like DKE43_00730 PF00884 Sulfatase DKE43_00735 PF10502 Signal peptidase, peptidase S26 DKE43_00740 PF01053 Cys/Met metabolism PLP-dependent enzyme DKE43_00750 PF00005 ABC transporter DKE43_00785 PF08331 Domain of unknown function (DUF1730) DKE43_00790 PF12671 Putative amidase domain DKE43_00795 PF00588 SpoU rRNA Methylase family DKE43_00800 PF15493 Domain of unknown function, YrpD DKE43_00805 PF08298 PrkA AAA domain DKE43_00805 PF06798 PrkA serine protein kinase C-terminal domain DKE43_00810 PF04285 Protein of unknown function (DUF444) DKE43_00820 PF07690 Major Facilitator Superfamily DKE43_00825 PF03358 NADPH-dependent FMN reductase DKE43_00835 PF00313 'Cold-shock' DNA-binding domain DKE43_00845 PF00990 Diguanylate cyclase, GGDEF domain DKE43_00845 PF07694 5TMR of 5TMR-LYT DKE43_00860 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DKE43_00870 PF07875 Coat F domain DKE43_00875 PF00512 His Kinase A (phospho-acceptor) domain DKE43_00875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_00875 PF13188 PAS domain DKE43_00875 PF00989 PAS fold DKE43_00875 PF13426 PAS domain DKE43_00880 PF00746 LPXTG cell wall anchor motif DKE43_00880 PF00565 Staphylococcal nuclease homologue DKE43_00880 PF00149 Calcineurin-like phosphoesterase DKE43_00880 PF02872 5'-nucleotidase, C-terminal domain DKE43_00885 PF04203 Sortase domain DKE43_00890 PF01479 S4 domain DKE43_00890 PF00849 RNA pseudouridylate synthase DKE43_00900 PF13419 Haloacid dehalogenase-like hydrolase DKE43_00905 PF00583 Acetyltransferase (GNAT) family DKE43_00905 PF00795 Carbon-nitrogen hydrolase DKE43_00920 PF05651 Putative sugar diacid recognition DKE43_00920 PF17853 GGDEF-like domain DKE43_00920 PF13556 PucR C-terminal helix-turn-helix domain DKE43_00925 PF00202 Aminotransferase class-III DKE43_00930 PF04309 Glycerol-3-phosphate responsive antiterminator DKE43_00935 PF00230 Major intrinsic protein DKE43_00940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DKE43_00940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DKE43_00945 PF01266 FAD dependent oxidoreductase DKE43_00945 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DKE43_00950 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE43_00950 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE43_00950 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE43_00950 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE43_00955 PF07730 Histidine kinase DKE43_00955 PF13185 GAF domain DKE43_00960 PF00196 Bacterial regulatory proteins, luxR family DKE43_00960 PF00072 Response regulator receiver domain DKE43_00975 PF14148 YhdB-like protein DKE43_00980 PF13028 Protein of unknown function (DUF3889) DKE43_00985 PF00199 Catalase DKE43_00985 PF06628 Catalase-related immune-responsive DKE43_00990 PF02082 Transcriptional regulator DKE43_00995 PF00175 Oxidoreductase NAD-binding domain DKE43_00995 PF00042 Globin DKE43_00995 PF00970 Oxidoreductase FAD-binding domain DKE43_01000 PF04293 SpoVR like protein DKE43_01005 PF00245 Alkaline phosphatase DKE43_01010 PF00877 NlpC/P60 family DKE43_01010 PF01476 LysM domain DKE43_01015 PF17453 Sigma-M inhibitor DKE43_01020 PF13800 Sigma factor regulator N-terminal DKE43_01020 PF13791 Sigma factor regulator C-terminal DKE43_01025 PF04542 Sigma-70 region 2 DKE43_01025 PF08281 Sigma-70, region 4 DKE43_01030 PF01553 Acyltransferase DKE43_01035 PF03471 Transporter associated domain DKE43_01035 PF01595 Cyclin M transmembrane N-terminal domain DKE43_01035 PF00571 CBS domain DKE43_01040 PF13411 MerR HTH family regulatory protein DKE43_01045 PF01595 Cyclin M transmembrane N-terminal domain DKE43_01045 PF03471 Transporter associated domain DKE43_01045 PF00571 CBS domain DKE43_01055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DKE43_01060 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DKE43_01065 PF03009 Glycerophosphoryl diester phosphodiesterase family DKE43_01070 PF17444 Uncharacterized YhdX-like DKE43_01075 PF00924 Mechanosensitive ion channel DKE43_01080 PF02146 Sir2 family DKE43_01085 PF01522 Polysaccharide deacetylase DKE43_01090 PF01063 Amino-transferase class IV DKE43_01095 PF00582 Universal stress protein family DKE43_01100 PF00005 ABC transporter DKE43_01100 PF00664 ABC transporter transmembrane region DKE43_01105 PF00005 ABC transporter DKE43_01105 PF00664 ABC transporter transmembrane region DKE43_01110 PF13460 NAD(P)H-binding DKE43_01115 PF00269 Small, acid-soluble spore proteins, alpha/beta type DKE43_01120 PF17912 MalK OB fold domain DKE43_01120 PF03459 TOBE domain DKE43_01120 PF00005 ABC transporter DKE43_01125 PF13556 PucR C-terminal helix-turn-helix domain DKE43_01130 PF17277 Family of unknown function (DUF5342) DKE43_01135 PF14398 YheC/D like ATP-grasp DKE43_01140 PF14398 YheC/D like ATP-grasp DKE43_01145 PF04286 Protein of unknown function (DUF445) DKE43_01150 PF06133 Control of competence regulator ComK, YlbF/YmcA DKE43_01160 PF04055 Radical SAM superfamily DKE43_01165 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DKE43_01170 PF00999 Sodium/hydrogen exchanger family DKE43_01175 PF02080 TrkA-C domain DKE43_01185 PF00378 Enoyl-CoA hydratase/isomerase DKE43_01190 PF14120 YhzD-like protein DKE43_01195 PF00149 Calcineurin-like phosphoesterase DKE43_01200 PF13514 AAA domain DKE43_01205 PF01966 HD domain DKE43_01210 PF14147 Sporulation protein YhaL DKE43_01220 PF09680 Family of unknown function DKE43_01225 PF09680 Family of unknown function DKE43_01235 PF11667 Putative zincin peptidase DKE43_01240 PF08963 Protein of unknown function (DUF1878) DKE43_01245 PF01047 MarR family DKE43_01250 PF12732 YtxH-like protein DKE43_01260 PF17099 Tryptophan transporter TrpP DKE43_01265 PF00266 Aminotransferase class-V DKE43_01270 PF01230 HIT domain DKE43_01275 PF00005 ABC transporter DKE43_01280 PF05975 Bacterial ABC transporter protein EcsB DKE43_01285 PF12787 EcsC protein family DKE43_01290 PF01546 Peptidase family M20/M25/M40 DKE43_01290 PF07687 Peptidase dimerisation domain DKE43_01300 PF03992 Antibiotic biosynthesis monooxygenase DKE43_01305 PF00905 Penicillin binding protein transpeptidase domain DKE43_01305 PF00912 Transglycosylase DKE43_01310 PF01208 Uroporphyrinogen decarboxylase (URO-D) DKE43_01325 PF17932 Tetracyclin repressor-like, C-terminal domain DKE43_01325 PF00440 Bacterial regulatory proteins, tetR family DKE43_01335 PF05343 M42 glutamyl aminopeptidase DKE43_01340 PF00375 Sodium:dicarboxylate symporter family DKE43_01345 PF14149 YhfH-like protein DKE43_01350 PF12706 Beta-lactamase superfamily domain DKE43_01355 PF10437 Bacterial lipoate protein ligase C-terminus DKE43_01355 PF03099 Biotin/lipoate A/B protein ligase family DKE43_01360 PF13193 AMP-binding enzyme C-terminal domain DKE43_01360 PF00501 AMP-binding enzyme DKE43_01370 PF16491 CAAX prenyl protease N-terminal, five membrane helices DKE43_01370 PF01435 Peptidase family M48 DKE43_01375 PF05922 Peptidase inhibitor I9 DKE43_01375 PF00082 Subtilase family DKE43_01380 PF00300 Histidine phosphatase superfamily (branch 1) DKE43_01385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_01390 PF00355 Rieske [2Fe-2S] domain DKE43_01390 PF01266 FAD dependent oxidoreductase DKE43_01400 PF08858 IDEAL domain DKE43_01405 PF06338 ComK protein DKE43_01410 PF14031 Putative serine dehydratase domain DKE43_01410 PF01168 Alanine racemase, N-terminal domain DKE43_01420 PF00155 Aminotransferase class I and II DKE43_01420 PF00392 Bacterial regulatory proteins, gntR family DKE43_01425 PF07690 Major Facilitator Superfamily DKE43_01430 PF01337 Barstar (barnase inhibitor) DKE43_01435 PF01032 FecCD transport family DKE43_01440 PF01032 FecCD transport family DKE43_01445 PF00005 ABC transporter DKE43_01450 PF01497 Periplasmic binding protein DKE43_01455 PF03816 Cell envelope-related transcriptional attenuator domain DKE43_01465 PF09335 SNARE associated Golgi protein DKE43_01470 PF10502 Signal peptidase, peptidase S26 DKE43_01475 PF05145 Transition state regulatory protein AbrB DKE43_01485 PF01435 Peptidase family M48 DKE43_01490 PF07681 DoxX DKE43_01495 PF02915 Rubrerythrin DKE43_01500 PF12705 PD-(D/E)XK nuclease superfamily DKE43_01505 PF00580 UvrD/REP helicase N-terminal domain DKE43_01505 PF12705 PD-(D/E)XK nuclease superfamily DKE43_01505 PF13361 UvrD-like helicase C-terminal domain DKE43_01510 PF00149 Calcineurin-like phosphoesterase DKE43_01510 PF12320 Type 5 capsule protein repressor C-terminal domain DKE43_01515 PF13476 AAA domain DKE43_01525 PF10676 Spore germination protein gerPA/gerPF DKE43_01530 PF10970 Spore germination protein GerPE DKE43_01540 PF10737 Spore germination protein GerPC DKE43_01545 PF10803 Spore germination GerPB DKE43_01550 PF10676 Spore germination protein gerPA/gerPF DKE43_01560 PF08757 CotH kinase protein DKE43_01570 PF01557 Fumarylacetoacetate (FAA) hydrolase family DKE43_01575 PF07457 Protein of unknown function (DUF1516) DKE43_01580 PF10949 Protein of unknown function (DUF2777) DKE43_01585 PF00733 Asparagine synthase DKE43_01585 PF13537 Glutamine amidotransferase domain DKE43_01590 PF01593 Flavin containing amine oxidoreductase DKE43_01605 PF01554 MatE DKE43_01610 PF12833 Helix-turn-helix domain DKE43_01610 PF02311 AraC-like ligand binding domain DKE43_01630 PF00202 Aminotransferase class-III DKE43_01635 PF00282 Pyridoxal-dependent decarboxylase conserved domain DKE43_01640 PF04183 IucA / IucC family DKE43_01640 PF06276 Ferric iron reductase FhuF-like transporter DKE43_01650 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) DKE43_01655 PF06276 Ferric iron reductase FhuF-like transporter DKE43_01655 PF04183 IucA / IucC family DKE43_01665 PF02310 B12 binding domain DKE43_01665 PF02965 Vitamin B12 dependent methionine synthase, activation domain DKE43_01665 PF00809 Pterin binding enzyme DKE43_01665 PF02607 B12 binding domain DKE43_01665 PF02574 Homocysteine S-methyltransferase DKE43_01670 PF02574 Homocysteine S-methyltransferase DKE43_01670 PF02219 Methylenetetrahydrofolate reductase DKE43_01675 PF04461 Protein of unknown function (DUF520) DKE43_01680 PF13509 S1 domain DKE43_01680 PF17783 CvfB-like winged helix domain DKE43_01690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_01690 PF02743 Cache domain DKE43_01690 PF00672 HAMP domain DKE43_01695 PF02645 Uncharacterised protein, DegV family COG1307 DKE43_01700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKE43_01700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKE43_01705 PF12690 Intracellular proteinase inhibitor DKE43_01710 PF12758 Protein of unknown function (DUF3813) DKE43_01725 PF00326 Prolyl oligopeptidase family DKE43_01730 PF01883 Iron-sulfur cluster assembly protein DKE43_01735 PF01565 FAD binding domain DKE43_01740 PF07690 Major Facilitator Superfamily DKE43_01745 PF01118 Semialdehyde dehydrogenase, NAD binding domain DKE43_01745 PF02774 Semialdehyde dehydrogenase, dimerisation domain DKE43_01750 PF01960 ArgJ family DKE43_01755 PF00696 Amino acid kinase family DKE43_01760 PF00202 Aminotransferase class-III DKE43_01765 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKE43_01765 PF00117 Glutamine amidotransferase class-I DKE43_01770 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DKE43_01770 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE43_01775 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKE43_01775 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKE43_01780 PF14168 YjzC-like protein DKE43_01785 PF07690 Major Facilitator Superfamily DKE43_01790 PF11151 Protein of unknown function (DUF2929) DKE43_01805 PF02608 ABC transporter substrate-binding protein PnrA-like DKE43_01810 PF10815 ComZ DKE43_01820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DKE43_01820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DKE43_01825 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE43_01825 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE43_01830 PF10026 Predicted Zn-dependent protease (DUF2268) DKE43_01835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_01835 PF00005 ABC transporter DKE43_01840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_01840 PF00005 ABC transporter DKE43_01845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKE43_01850 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_01855 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_01855 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE43_01860 PF12227 Protein of unknown function (DUF3603) DKE43_01865 PF00579 tRNA synthetases class I (W and Y) DKE43_01870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKE43_01875 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_01880 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE43_01880 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_01885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_01885 PF00005 ABC transporter DKE43_01890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_01890 PF00005 ABC transporter DKE43_01900 PF13508 Acetyltransferase (GNAT) domain DKE43_01905 PF03960 ArsC family DKE43_01910 PF03741 Integral membrane protein TerC family DKE43_01915 PF05389 Negative regulator of genetic competence (MecA) DKE43_01920 PF13091 PLD-like domain DKE43_01920 PF13396 Phospholipase_D-nuclease N-terminal DKE43_01930 PF01432 Peptidase family M3 DKE43_01930 PF08439 Oligopeptidase F DKE43_01940 PF01152 Bacterial-like globin DKE43_01945 PF01464 Transglycosylase SLT domain DKE43_01950 PF01928 CYTH domain DKE43_01960 PF04607 Region found in RelA / SpoT proteins DKE43_01965 PF01513 ATP-NAD kinase DKE43_01970 PF00849 RNA pseudouridylate synthase DKE43_01975 PF00149 Calcineurin-like phosphoesterase DKE43_01980 PF02254 TrkA-N domain DKE43_01980 PF00999 Sodium/hydrogen exchanger family DKE43_01980 PF02080 TrkA-C domain DKE43_01985 PF03070 TENA/THI-4/PQQC family DKE43_01990 PF02581 Thiamine monophosphate synthase DKE43_01995 PF01266 FAD dependent oxidoreductase DKE43_02000 PF02597 ThiS family DKE43_02005 PF05690 Thiazole biosynthesis protein ThiG DKE43_02010 PF00899 ThiF family DKE43_02015 PF08543 Phosphomethylpyrimidine kinase DKE43_02025 PF14153 Spore coat protein CotO DKE43_02030 PF10612 Spore coat protein Z DKE43_02035 PF10612 Spore coat protein Z DKE43_02040 PF07552 Spore Coat Protein X and V domain DKE43_02050 PF07552 Spore Coat Protein X and V domain DKE43_02055 PF07098 Protein of unknown function (DUF1360) DKE43_02070 PF14069 Stage VI sporulation protein F DKE43_02075 PF00580 UvrD/REP helicase N-terminal domain DKE43_02075 PF13361 UvrD-like helicase C-terminal domain DKE43_02085 PF13673 Acetyltransferase (GNAT) domain DKE43_02095 PF00756 Putative esterase DKE43_02100 PF01053 Cys/Met metabolism PLP-dependent enzyme DKE43_02105 PF01053 Cys/Met metabolism PLP-dependent enzyme DKE43_02115 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_02115 PF00107 Zinc-binding dehydrogenase DKE43_02130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DKE43_02145 PF00700 Bacterial flagellin C-terminal helical region DKE43_02145 PF00669 Bacterial flagellin N-terminal helical region DKE43_02175 PF00302 Chloramphenicol acetyltransferase DKE43_02180 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_02180 PF13176 Tetratricopeptide repeat DKE43_02195 PF10852 Protein of unknown function (DUF2651) DKE43_02200 PF01636 Phosphotransferase enzyme family DKE43_02210 PF01177 Asp/Glu/Hydantoin racemase DKE43_02220 PF03466 LysR substrate binding domain DKE43_02220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_02225 PF07690 Major Facilitator Superfamily DKE43_02235 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_02260 PF00842 Alanine racemase, C-terminal domain DKE43_02260 PF01168 Alanine racemase, N-terminal domain DKE43_02270 PF00669 Bacterial flagellin N-terminal helical region DKE43_02270 PF00700 Bacterial flagellin C-terminal helical region DKE43_02275 PF00669 Bacterial flagellin N-terminal helical region DKE43_02275 PF00700 Bacterial flagellin C-terminal helical region DKE43_02280 PF01494 FAD binding domain DKE43_02295 PF05908 Poly-gamma-glutamate hydrolase DKE43_02300 PF06114 IrrE N-terminal-like domain DKE43_02305 PF01471 Putative peptidoglycan binding domain DKE43_02305 PF01510 N-acetylmuramoyl-L-alanine amidase DKE43_02305 PF01476 LysM domain DKE43_02310 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system DKE43_02315 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DKE43_02320 PF01384 Phosphate transporter family DKE43_02325 PF01865 Protein of unknown function DUF47 DKE43_02345 PF03611 PTS system sugar-specific permease component DKE43_02360 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_02360 PF00107 Zinc-binding dehydrogenase DKE43_02365 PF00676 Dehydrogenase E1 component DKE43_02370 PF00364 Biotin-requiring enzyme DKE43_02370 PF02779 Transketolase, pyrimidine binding domain DKE43_02370 PF02780 Transketolase, C-terminal domain DKE43_02375 PF00364 Biotin-requiring enzyme DKE43_02375 PF02817 e3 binding domain DKE43_02375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE43_02380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE43_02380 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_02395 PF04198 Putative sugar-binding domain DKE43_02405 PF13520 Amino acid permease DKE43_02410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE43_02415 PF13180 PDZ domain DKE43_02420 PF03807 NADP oxidoreductase coenzyme F420-dependent DKE43_02420 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKE43_02425 PF04951 D-aminopeptidase DKE43_02430 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_02435 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_02435 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE43_02440 PF00005 ABC transporter DKE43_02440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_02445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKE43_02450 PF17676 LD-carboxypeptidase C-terminal domain DKE43_02450 PF02016 LD-carboxypeptidase N-terminal domain DKE43_02455 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DKE43_02455 PF13378 Enolase C-terminal domain-like DKE43_02460 PF00877 NlpC/P60 family DKE43_02465 PF00005 ABC transporter DKE43_02465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_02475 PF03061 Thioesterase superfamily DKE43_02480 PF03551 Transcriptional regulator PadR-like family DKE43_02495 PF13302 Acetyltransferase (GNAT) domain DKE43_02500 PF02805 Metal binding domain of Ada DKE43_02500 PF12833 Helix-turn-helix domain DKE43_02500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE43_02500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE43_02505 PF00893 Small Multidrug Resistance protein DKE43_02510 PF00893 Small Multidrug Resistance protein DKE43_02520 PF01842 ACT domain DKE43_02520 PF00551 Formyl transferase DKE43_02525 PF01472 PUA domain DKE43_02525 PF00696 Amino acid kinase family DKE43_02530 PF00171 Aldehyde dehydrogenase family DKE43_02535 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_02545 PF02566 OsmC-like protein DKE43_02550 PF01047 MarR family DKE43_02555 PF02566 OsmC-like protein DKE43_02560 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE43_02565 PF01717 Cobalamin-independent synthase, Catalytic domain DKE43_02565 PF08267 Cobalamin-independent synthase, N-terminal domain DKE43_02570 PF00082 Subtilase family DKE43_02575 PF00072 Response regulator receiver domain DKE43_02575 PF00486 Transcriptional regulatory protein, C terminal DKE43_02580 PF00512 His Kinase A (phospho-acceptor) domain DKE43_02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_02580 PF00672 HAMP domain DKE43_02585 PF03413 Peptidase propeptide and YPEB domain DKE43_02590 PF03413 Peptidase propeptide and YPEB domain DKE43_02600 PF01769 Divalent cation transporter DKE43_02600 PF00571 CBS domain DKE43_02600 PF03448 MgtE intracellular N domain DKE43_02615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_02615 PF03466 LysR substrate binding domain DKE43_02625 PF13411 MerR HTH family regulatory protein DKE43_02640 PF01047 MarR family DKE43_02650 PF00990 Diguanylate cyclase, GGDEF domain DKE43_02650 PF03707 Bacterial signalling protein N terminal repeat DKE43_02650 PF00563 EAL domain DKE43_02655 PF09335 SNARE associated Golgi protein DKE43_02660 PF03741 Integral membrane protein TerC family DKE43_02665 PF04542 Sigma-70 region 2 DKE43_02670 PF12791 Anti-sigma factor N-terminus DKE43_02675 PF00269 Small, acid-soluble spore proteins, alpha/beta type DKE43_02680 PF08876 Domain of unknown function (DUF1836) DKE43_02685 PF01435 Peptidase family M48 DKE43_02690 PF02386 Cation transport protein DKE43_02695 PF04239 Protein of unknown function (DUF421) DKE43_02705 PF01757 Acyltransferase family DKE43_02710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_02710 PF00512 His Kinase A (phospho-acceptor) domain DKE43_02710 PF00989 PAS fold DKE43_02710 PF13188 PAS domain DKE43_02710 PF13426 PAS domain DKE43_02715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKE43_02715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKE43_02720 PF01008 Initiation factor 2 subunit family DKE43_02725 PF01636 Phosphotransferase enzyme family DKE43_02730 PF00155 Aminotransferase class I and II DKE43_02735 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DKE43_02735 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DKE43_02745 PF00596 Class II Aldolase and Adducin N-terminal domain DKE43_02750 PF03079 ARD/ARD' family DKE43_02755 PF09388 Spo0E like sporulation regulatory protein DKE43_02760 PF02743 Cache domain DKE43_02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_02760 PF00512 His Kinase A (phospho-acceptor) domain DKE43_02765 PF01047 MarR family DKE43_02770 PF13677 Membrane MotB of proton-channel complex MotA/MotB DKE43_02770 PF00691 OmpA family DKE43_02775 PF01618 MotA/TolQ/ExbB proton channel family DKE43_02780 PF17871 AAA lid domain DKE43_02780 PF07724 AAA domain (Cdc48 subfamily) DKE43_02780 PF10431 C-terminal, D2-small domain, of ClpB protein DKE43_02780 PF00004 ATPase family associated with various cellular activities (AAA) DKE43_02790 PF06508 Queuosine biosynthesis protein QueC DKE43_02795 PF01242 6-pyruvoyl tetrahydropterin synthase DKE43_02800 PF04055 Radical SAM superfamily DKE43_02805 PF14489 QueF-like protein DKE43_02815 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DKE43_02825 PF07486 Cell Wall Hydrolase DKE43_02830 PF01943 Polysaccharide biosynthesis protein DKE43_02835 PF00578 AhpC/TSA family DKE43_02845 PF00557 Metallopeptidase family M24 DKE43_02845 PF01321 Creatinase/Prolidase N-terminal domain DKE43_02850 PF00356 Bacterial regulatory proteins, lacI family DKE43_02850 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DKE43_02855 PF03123 CAT RNA binding domain DKE43_02855 PF00874 PRD domain DKE43_02860 PF00367 phosphotransferase system, EIIB DKE43_02860 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKE43_02860 PF02378 Phosphotransferase system, EIIC DKE43_02865 PF00381 PTS HPr component phosphorylation site DKE43_02870 PF02896 PEP-utilising enzyme, TIM barrel domain DKE43_02870 PF00391 PEP-utilising enzyme, mobile domain DKE43_02870 PF05524 PEP-utilising enzyme, N-terminal DKE43_02875 PF11132 Transcriptional regulator protein (SplA) DKE43_02885 PF02743 Cache domain DKE43_02885 PF00672 HAMP domain DKE43_02885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_02890 PF00106 short chain dehydrogenase DKE43_02895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE43_02895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKE43_02900 PF00188 Cysteine-rich secretory protein family DKE43_02905 PF00905 Penicillin binding protein transpeptidase domain DKE43_02905 PF03717 Penicillin-binding Protein dimerisation domain DKE43_02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_02910 PF00512 His Kinase A (phospho-acceptor) domain DKE43_02910 PF08447 PAS fold DKE43_02910 PF00989 PAS fold DKE43_02915 PF00155 Aminotransferase class I and II DKE43_02920 PF16916 Dimerisation domain of Zinc Transporter DKE43_02920 PF01545 Cation efflux family DKE43_02925 PF06271 RDD family DKE43_02935 PF01584 CheW-like domain DKE43_02935 PF00072 Response regulator receiver domain DKE43_02940 PF14177 YkyB-like protein DKE43_02955 PF07690 Major Facilitator Superfamily DKE43_02960 PF03734 L,D-transpeptidase catalytic domain DKE43_02960 PF01476 LysM domain DKE43_02965 PF00149 Calcineurin-like phosphoesterase DKE43_02965 PF10518 TAT (twin-arginine translocation) pathway signal sequence DKE43_02975 PF10388 EAL-domain associated signalling protein domain DKE43_02975 PF00563 EAL domain DKE43_02980 PF05067 Manganese containing catalase DKE43_02985 PF08796 Protein of unknown function (DUF1797) DKE43_02990 PF04308 Ribonuclease H-like DKE43_02995 PF14156 Antirepressor AbbA DKE43_03005 PF03466 LysR substrate binding domain DKE43_03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_03015 PF00258 Flavodoxin DKE43_03025 PF00258 Flavodoxin DKE43_03030 PF00132 Bacterial transferase hexapeptide (six repeats) DKE43_03030 PF14602 Hexapeptide repeat of succinyl-transferase DKE43_03030 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DKE43_03035 PF07687 Peptidase dimerisation domain DKE43_03035 PF01546 Peptidase family M20/M25/M40 DKE43_03040 PF03698 Uncharacterised protein family (UPF0180) DKE43_03045 PF00924 Mechanosensitive ion channel DKE43_03050 PF10417 C-terminal domain of 1-Cys peroxiredoxin DKE43_03050 PF00578 AhpC/TSA family DKE43_03055 PF00578 AhpC/TSA family DKE43_03070 PF12804 MobA-like NTP transferase domain DKE43_03075 PF00899 ThiF family DKE43_03080 PF00994 Probable molybdopterin binding domain DKE43_03080 PF03454 MoeA C-terminal region (domain IV) DKE43_03080 PF03453 MoeA N-terminal region (domain I and II) DKE43_03085 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DKE43_03090 PF02391 MoaE protein DKE43_03095 PF02597 ThiS family DKE43_03110 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DKE43_03115 PF00005 ABC transporter DKE43_03120 PF02687 FtsX-like permease family DKE43_03120 PF12704 MacB-like periplasmic core domain DKE43_03125 PF00455 DeoR C terminal sensor domain DKE43_03125 PF08220 DeoR-like helix-turn-helix domain DKE43_03130 PF00294 pfkB family carbohydrate kinase DKE43_03135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_03135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_03140 PF10502 Signal peptidase, peptidase S26 DKE43_03150 PF00005 ABC transporter DKE43_03150 PF12848 ABC transporter DKE43_03155 PF02073 Thermophilic metalloprotease (M29) DKE43_03165 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DKE43_03165 PF18277 AbrB C-terminal domain DKE43_03170 PF00512 His Kinase A (phospho-acceptor) domain DKE43_03170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_03170 PF00989 PAS fold DKE43_03175 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DKE43_03180 PF02080 TrkA-C domain DKE43_03180 PF02254 TrkA-N domain DKE43_03185 PF01979 Amidohydrolase family DKE43_03185 PF13382 Adenine deaminase C-terminal domain DKE43_03190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DKE43_03190 PF17770 Ribonuclease J C-terminal domain DKE43_03190 PF00753 Metallo-beta-lactamase superfamily DKE43_03205 PF01327 Polypeptide deformylase DKE43_03220 PF00676 Dehydrogenase E1 component DKE43_03225 PF02780 Transketolase, C-terminal domain DKE43_03225 PF02779 Transketolase, pyrimidine binding domain DKE43_03230 PF02817 e3 binding domain DKE43_03230 PF00364 Biotin-requiring enzyme DKE43_03230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE43_03235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE43_03235 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_03250 PF13790 SR1 protein DKE43_03255 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DKE43_03255 PF01276 Orn/Lys/Arg decarboxylase, major domain DKE43_03260 PF05256 Uncharacterised protein family (UPF0223) DKE43_03265 PF06335 Protein of unknown function (DUF1054) DKE43_03275 PF00459 Inositol monophosphatase family DKE43_03290 PF08281 Sigma-70, region 4 DKE43_03290 PF04542 Sigma-70 region 2 DKE43_03295 PF13490 Putative zinc-finger DKE43_03315 PF14036 YlaH-like protein DKE43_03320 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DKE43_03325 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DKE43_03330 PF13638 PIN domain DKE43_03330 PF02562 PhoH-like protein DKE43_03340 PF04960 Glutaminase DKE43_03345 PF07408 Protein of unknown function (DUF1507) DKE43_03350 PF01098 Cell cycle protein DKE43_03355 PF00289 Biotin carboxylase, N-terminal domain DKE43_03355 PF02785 Biotin carboxylase C-terminal domain DKE43_03355 PF02436 Conserved carboxylase domain DKE43_03355 PF00364 Biotin-requiring enzyme DKE43_03355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE43_03355 PF00682 HMGL-like DKE43_03365 PF02628 Cytochrome oxidase assembly protein DKE43_03370 PF01040 UbiA prenyltransferase family DKE43_03375 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DKE43_03375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DKE43_03375 PF00034 Cytochrome c DKE43_03380 PF00115 Cytochrome C and Quinol oxidase polypeptide I DKE43_03385 PF00510 Cytochrome c oxidase subunit III DKE43_03390 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKE43_03395 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DKE43_03405 PF08868 YugN-like family DKE43_03410 PF00571 CBS domain DKE43_03415 PF00188 Cysteine-rich secretory protein family DKE43_03415 PF14504 CAP-associated N-terminal DKE43_03420 PF14071 Putative coat protein DKE43_03425 PF14003 YlbE-like protein DKE43_03435 PF06133 Control of competence regulator ComK, YlbF/YmcA DKE43_03440 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DKE43_03450 PF01467 Cytidylyltransferase-like DKE43_03455 PF07670 Nucleoside recognition DKE43_03460 PF01734 Patatin-like phospholipase DKE43_03465 PF05362 Lon protease (S16) C-terminal proteolytic domain DKE43_03465 PF13180 PDZ domain DKE43_03470 PF05636 HIGH Nucleotidyl Transferase DKE43_03475 PF02620 Large ribosomal RNA subunit accumulation protein YceD DKE43_03480 PF01783 Ribosomal L32p protein family DKE43_03490 PF00583 Acetyltransferase (GNAT) family DKE43_03495 PF08546 Ketopantoate reductase PanE/ApbA C terminal DKE43_03495 PF02558 Ketopantoate reductase PanE/ApbA DKE43_03500 PF10079 Bacillithiol biosynthesis BshC DKE43_03505 PF02381 MraZ protein, putative antitoxin-like DKE43_03510 PF01795 MraW methylase family DKE43_03530 PF03717 Penicillin-binding Protein dimerisation domain DKE43_03530 PF00905 Penicillin binding protein transpeptidase domain DKE43_03530 PF03793 PASTA domain DKE43_03535 PF01225 Mur ligase family, catalytic domain DKE43_03535 PF02875 Mur ligase family, glutamate ligase domain DKE43_03535 PF08245 Mur ligase middle domain DKE43_03540 PF00953 Glycosyl transferase family 4 DKE43_03540 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DKE43_03545 PF08245 Mur ligase middle domain DKE43_03545 PF02875 Mur ligase family, glutamate ligase domain DKE43_03550 PF01098 Cell cycle protein DKE43_03555 PF04101 Glycosyltransferase family 28 C-terminal domain DKE43_03555 PF03033 Glycosyltransferase family 28 N-terminal domain DKE43_03560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DKE43_03560 PF01565 FAD binding domain DKE43_03565 PF08478 POTRA domain, FtsQ-type DKE43_03570 PF05949 Bacterial protein of unknown function (DUF881) DKE43_03575 PF05949 Bacterial protein of unknown function (DUF881) DKE43_03580 PF06947 Protein of unknown function (DUF1290) DKE43_03585 PF02491 SHS2 domain inserted in FTSA DKE43_03590 PF12327 FtsZ family, C-terminal domain DKE43_03590 PF00091 Tubulin/FtsZ family, GTPase domain DKE43_03595 PF05922 Peptidase inhibitor I9 DKE43_03595 PF00082 Subtilase family DKE43_03600 PF03419 Sporulation factor SpoIIGA DKE43_03605 PF04542 Sigma-70 region 2 DKE43_03605 PF04545 Sigma-70, region 4 DKE43_03610 PF04539 Sigma-70 region 3 DKE43_03610 PF04542 Sigma-70 region 2 DKE43_03610 PF04545 Sigma-70, region 4 DKE43_03615 PF04198 Putative sugar-binding domain DKE43_03630 PF03608 PTS system enzyme II sorbitol-specific factor DKE43_03635 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DKE43_03635 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DKE43_03640 PF03829 PTS system glucitol/sorbitol-specific IIA component DKE43_03645 PF00005 ABC transporter DKE43_03650 PF05239 PRC-barrel domain DKE43_03660 PF01168 Alanine racemase, N-terminal domain DKE43_03665 PF04472 Cell division protein SepF DKE43_03670 PF02325 YGGT family DKE43_03675 PF01479 S4 domain DKE43_03675 PF17774 Putative RNA-binding domain in YlmH DKE43_03680 PF05103 DivIVA protein DKE43_03685 PF00133 tRNA synthetases class I (I, L, M and V) DKE43_03685 PF08264 Anticodon-binding domain of tRNA DKE43_03690 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE43_03695 PF01252 Signal peptidase (SPase) II DKE43_03700 PF01479 S4 domain DKE43_03700 PF00849 RNA pseudouridylate synthase DKE43_03705 PF00156 Phosphoribosyl transferase domain DKE43_03710 PF00860 Permease family DKE43_03715 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKE43_03715 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKE43_03720 PF01979 Amidohydrolase family DKE43_03725 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKE43_03725 PF00117 Glutamine amidotransferase class-I DKE43_03730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE43_03730 PF02142 MGS-like domain DKE43_03730 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DKE43_03735 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DKE43_03740 PF01180 Dihydroorotate dehydrogenase DKE43_03745 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DKE43_03750 PF00156 Phosphoribosyl transferase domain DKE43_03760 PF01507 Phosphoadenosine phosphosulfate reductase family DKE43_03765 PF01384 Phosphate transporter family DKE43_03770 PF01747 ATP-sulfurylase DKE43_03770 PF14306 PUA-like domain DKE43_03780 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DKE43_03785 PF01903 CbiX DKE43_03800 PF00690 Cation transporter/ATPase, N-terminus DKE43_03800 PF00689 Cation transporting ATPase, C-terminus DKE43_03805 PF08340 Domain of unknown function (DUF1732) DKE43_03805 PF03755 YicC-like family, N-terminal region DKE43_03810 PF04025 Domain of unknown function (DUF370) DKE43_03815 PF00625 Guanylate kinase DKE43_03820 PF01192 RNA polymerase Rpb6 DKE43_03825 PF02441 Flavoprotein DKE43_03825 PF04127 DNA / pantothenate metabolism flavoprotein DKE43_03830 PF04851 Type III restriction enzyme, res subunit DKE43_03830 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DKE43_03830 PF18074 Primosomal protein N C-terminal domain DKE43_03830 PF00271 Helicase conserved C-terminal domain DKE43_03830 PF17764 3′ DNA-binding domain (3′BD) DKE43_03835 PF01327 Polypeptide deformylase DKE43_03840 PF02911 Formyl transferase, C-terminal domain DKE43_03840 PF00551 Formyl transferase DKE43_03845 PF01189 16S rRNA methyltransferase RsmB/F DKE43_03845 PF01029 NusB family DKE43_03850 PF04055 Radical SAM superfamily DKE43_03860 PF03793 PASTA domain DKE43_03860 PF00069 Protein kinase domain DKE43_03865 PF16745 RsgA N-terminal domain DKE43_03865 PF03193 RsgA GTPase DKE43_03870 PF00834 Ribulose-phosphate 3 epimerase family DKE43_03875 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DKE43_03875 PF04263 Thiamin pyrophosphokinase, catalytic domain DKE43_03880 PF08183 Stage V sporulation protein family DKE43_03885 PF00830 Ribosomal L28 family DKE43_03890 PF03780 Asp23 family, cell envelope-related function DKE43_03895 PF13684 Dihydroxyacetone kinase family DKE43_03895 PF02734 DAK2 domain DKE43_03900 PF01842 ACT domain DKE43_03900 PF03315 Serine dehydratase beta chain DKE43_03905 PF03313 Serine dehydratase alpha chain DKE43_03910 PF00270 DEAD/DEAH box helicase DKE43_03910 PF00271 Helicase conserved C-terminal domain DKE43_03910 PF17191 RecG wedge domain DKE43_03920 PF02504 Fatty acid synthesis protein DKE43_03925 PF00698 Acyl transferase domain DKE43_03935 PF00550 Phosphopantetheine attachment site DKE43_03940 PF14622 Ribonuclease-III-like DKE43_03940 PF00035 Double-stranded RNA binding motif DKE43_03945 PF02463 RecF/RecN/SMC N terminal domain DKE43_03945 PF06470 SMC proteins Flexible Hinge Domain DKE43_03950 PF02881 SRP54-type protein, helical bundle domain DKE43_03950 PF00448 SRP54-type protein, GTPase domain DKE43_03955 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DKE43_03960 PF02978 Signal peptide binding domain DKE43_03960 PF02881 SRP54-type protein, helical bundle domain DKE43_03960 PF00448 SRP54-type protein, GTPase domain DKE43_03965 PF00886 Ribosomal protein S16 DKE43_03975 PF11068 YlqD protein DKE43_03980 PF01782 RimM N-terminal domain DKE43_03980 PF05239 PRC-barrel domain DKE43_03985 PF01746 tRNA (Guanine-1)-methyltransferase DKE43_03990 PF01245 Ribosomal protein L19 DKE43_03995 PF01926 50S ribosome-binding GTPase DKE43_04000 PF01351 Ribonuclease HII DKE43_04010 PF01312 FlhB HrpN YscU SpaS Family DKE43_04015 PF08442 ATP-grasp domain DKE43_04015 PF00549 CoA-ligase DKE43_04020 PF02629 CoA binding domain DKE43_04020 PF00549 CoA-ligase DKE43_04025 PF02481 DNA recombination-mediator protein A DKE43_04030 PF01751 Toprim domain DKE43_04030 PF01396 Topoisomerase DNA binding C4 zinc finger DKE43_04030 PF01131 DNA topoisomerase DKE43_04035 PF01134 Glucose inhibited division protein A DKE43_04040 PF00589 Phage integrase family DKE43_04040 PF02899 Phage integrase, N-terminal SAM-like domain DKE43_04045 PF00227 Proteasome subunit DKE43_04050 PF10431 C-terminal, D2-small domain, of ClpB protein DKE43_04050 PF07724 AAA domain (Cdc48 subfamily) DKE43_04050 PF00004 ATPase family associated with various cellular activities (AAA) DKE43_04055 PF06018 CodY GAF-like domain DKE43_04055 PF08222 CodY helix-turn-helix domain DKE43_04060 PF00460 Flagella basal body rod protein DKE43_04065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DKE43_04065 PF00460 Flagella basal body rod protein DKE43_04070 PF02049 Flagellar hook-basal body complex protein FliE DKE43_04075 PF08345 Flagellar M-ring protein C-terminal DKE43_04075 PF01514 Secretory protein of YscJ/FliF family DKE43_04080 PF01706 FliG C-terminal domain DKE43_04080 PF14841 FliG middle domain DKE43_04080 PF14842 FliG N-terminal domain DKE43_04085 PF02108 Flagellar assembly protein FliH DKE43_04090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE43_04090 PF18269 T3SS EscN ATPase C-terminal domain DKE43_04090 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE43_04095 PF02050 Flagellar FliJ protein DKE43_04100 PF03448 MgtE intracellular N domain DKE43_04105 PF02120 Flagellar hook-length control protein FliK DKE43_04110 PF03963 Flagellar hook capping protein - N-terminal region DKE43_04115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DKE43_04115 PF00460 Flagella basal body rod protein DKE43_04120 PF06289 Flagellar and Swarming motility proteins DKE43_04125 PF03748 Flagellar basal body-associated protein FliL DKE43_04130 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DKE43_04130 PF02154 Flagellar motor switch protein FliM DKE43_04135 PF04509 CheC-like family DKE43_04135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DKE43_04140 PF00072 Response regulator receiver domain DKE43_04145 PF04347 Flagellar biosynthesis protein, FliO DKE43_04150 PF00813 FliP family DKE43_04155 PF01313 Bacterial export proteins, family 3 DKE43_04160 PF01311 Bacterial export proteins, family 1 DKE43_04165 PF01312 FlhB HrpN YscU SpaS Family DKE43_04170 PF00771 FHIPEP family DKE43_04175 PF00448 SRP54-type protein, GTPase domain DKE43_04180 PF10609 NUBPL iron-transfer P-loop NTPase DKE43_04185 PF00072 Response regulator receiver domain DKE43_04185 PF01339 CheB methylesterase DKE43_04190 PF07194 P2 response regulator binding domain DKE43_04190 PF01584 CheW-like domain DKE43_04190 PF02895 Signal transducing histidine kinase, homodimeric domain DKE43_04190 PF01627 Hpt domain DKE43_04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_04195 PF01584 CheW-like domain DKE43_04200 PF04509 CheC-like family DKE43_04205 PF03975 CheD chemotactic sensory transduction DKE43_04210 PF04542 Sigma-70 region 2 DKE43_04210 PF04539 Sigma-70 region 3 DKE43_04210 PF04545 Sigma-70, region 4 DKE43_04220 PF00318 Ribosomal protein S2 DKE43_04225 PF00889 Elongation factor TS DKE43_04230 PF00696 Amino acid kinase family DKE43_04235 PF01765 Ribosome recycling factor DKE43_04240 PF01255 Putative undecaprenyl diphosphate synthase DKE43_04250 PF13288 DXP reductoisomerase C-terminal domain DKE43_04250 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DKE43_04250 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DKE43_04255 PF02163 Peptidase family M50 DKE43_04255 PF17820 PDZ domain DKE43_04260 PF03129 Anticodon binding domain DKE43_04260 PF04073 Aminoacyl-tRNA editing domain DKE43_04260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKE43_04265 PF14480 DNA polymerase III polC-type N-terminus I DKE43_04265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DKE43_04265 PF07733 Bacterial DNA polymerase III alpha NTPase domain DKE43_04265 PF11490 DNA polymerase III polC-type N-terminus II DKE43_04265 PF00929 Exonuclease DKE43_04265 PF14579 Helix-hairpin-helix motif DKE43_04265 PF02811 PHP domain DKE43_04270 PF00942 Cellulose binding domain DKE43_04270 PF00759 Glycosyl hydrolase family 9 DKE43_04275 PF00942 Cellulose binding domain DKE43_04275 PF02011 Glycosyl hydrolase family 48 DKE43_04275 PF00759 Glycosyl hydrolase family 9 DKE43_04290 PF17384 RimP C-terminal SH3 domain DKE43_04290 PF02576 RimP N-terminal domain DKE43_04295 PF00575 S1 RNA binding domain DKE43_04295 PF08529 NusA N-terminal domain DKE43_04295 PF13184 NusA-like KH domain DKE43_04300 PF04296 Protein of unknown function (DUF448) DKE43_04305 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DKE43_04310 PF04760 Translation initiation factor IF-2, N-terminal region DKE43_04310 PF11987 Translation-initiation factor 2 DKE43_04310 PF00009 Elongation factor Tu GTP binding domain DKE43_04315 PF04456 Protein of unknown function (DUF503) DKE43_04320 PF02033 Ribosome-binding factor A DKE43_04325 PF16198 tRNA pseudouridylate synthase B C-terminal domain DKE43_04325 PF01509 TruB family pseudouridylate synthase (N terminal domain) DKE43_04330 PF01687 Riboflavin kinase DKE43_04330 PF06574 FAD synthetase DKE43_04335 PF00312 Ribosomal protein S15 DKE43_04340 PF00575 S1 RNA binding domain DKE43_04340 PF01138 3' exoribonuclease family, domain 1 DKE43_04340 PF03725 3' exoribonuclease family, domain 2 DKE43_04340 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DKE43_04340 PF00013 KH domain DKE43_04345 PF01522 Polysaccharide deacetylase DKE43_04350 PF00675 Insulinase (Peptidase family M16) DKE43_04350 PF05193 Peptidase M16 inactive domain DKE43_04360 PF05239 PRC-barrel domain DKE43_04365 PF16924 Dipicolinate synthase subunit A N-terminal domain DKE43_04365 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DKE43_04370 PF02441 Flavoprotein DKE43_04375 PF02774 Semialdehyde dehydrogenase, dimerisation domain DKE43_04375 PF01118 Semialdehyde dehydrogenase, NAD binding domain DKE43_04380 PF13840 ACT domain DKE43_04380 PF00696 Amino acid kinase family DKE43_04385 PF00701 Dihydrodipicolinate synthetase family DKE43_04390 PF17770 Ribonuclease J C-terminal domain DKE43_04390 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DKE43_04390 PF00753 Metallo-beta-lactamase superfamily DKE43_04395 PF00574 Clp protease DKE43_04400 PF14035 YlzJ-like protein DKE43_04405 PF01580 FtsK/SpoIIIE family DKE43_04405 PF09397 Ftsk gamma domain DKE43_04405 PF17854 FtsK alpha domain DKE43_04410 PF00392 Bacterial regulatory proteins, gntR family DKE43_04410 PF07702 UTRA domain DKE43_04415 PF07690 Major Facilitator Superfamily DKE43_04420 PF03176 MMPL family DKE43_04425 PF05193 Peptidase M16 inactive domain DKE43_04430 PF05193 Peptidase M16 inactive domain DKE43_04430 PF00675 Insulinase (Peptidase family M16) DKE43_04440 PF03176 MMPL family DKE43_04450 PF11588 Protein of unknown function (DUF3243) DKE43_04455 PF11868 Protein of unknown function (DUF3388) DKE43_04460 PF13464 Domain of unknown function (DUF4115) DKE43_04465 PF01066 CDP-alcohol phosphatidyltransferase DKE43_04470 PF18146 Damage-inducible protein CinA KH domain DKE43_04470 PF00994 Probable molybdopterin binding domain DKE43_04470 PF02464 Competence-damaged protein DKE43_04475 PF00154 recA bacterial DNA recombination protein DKE43_04480 PF12072 Domain of unknown function (DUF3552) DKE43_04480 PF00013 KH domain DKE43_04480 PF01966 HD domain DKE43_04485 PF13277 YmdB-like protein DKE43_04490 PF04232 Stage V sporulation protein S (SpoVS) DKE43_04495 PF00873 AcrB/AcrD/AcrF family DKE43_04500 PF00107 Zinc-binding dehydrogenase DKE43_04500 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_04505 PF00155 Aminotransferase class I and II DKE43_04515 PF04055 Radical SAM superfamily DKE43_04515 PF01938 TRAM domain DKE43_04515 PF00919 Uncharacterized protein family UPF0004 DKE43_04520 PF06133 Control of competence regulator ComK, YlbF/YmcA DKE43_04525 PF10628 Outer spore coat protein E (CotE) DKE43_04530 PF00488 MutS domain V DKE43_04530 PF05188 MutS domain II DKE43_04530 PF05192 MutS domain III DKE43_04530 PF01624 MutS domain I DKE43_04530 PF05190 MutS family domain IV DKE43_04535 PF08676 MutL C terminal dimerisation domain DKE43_04535 PF01119 DNA mismatch repair protein, C-terminal domain DKE43_04545 PF17735 Biofilm surface layer A DKE43_04560 PF02559 CarD-like/TRCF domain DKE43_04565 PF05908 Poly-gamma-glutamate hydrolase DKE43_04570 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_04575 PF00082 Subtilase family DKE43_04580 PF05908 Poly-gamma-glutamate hydrolase DKE43_04585 PF02566 OsmC-like protein DKE43_04590 PF00893 Small Multidrug Resistance protein DKE43_04595 PF00893 Small Multidrug Resistance protein DKE43_04610 PF12788 YmaF family DKE43_04620 PF17209 Hfq protein DKE43_04635 PF07972 NrdI Flavodoxin like DKE43_04640 PF00317 Ribonucleotide reductase, all-alpha domain DKE43_04640 PF02867 Ribonucleotide reductase, barrel domain DKE43_04640 PF08343 Ribonucleotide reductase N-terminal DKE43_04645 PF00268 Ribonucleotide reductase, small chain DKE43_04655 PF05036 Sporulation related domain DKE43_04655 PF01520 N-acetylmuramoyl-L-alanine amidase DKE43_04660 PF17866 AAA lid domain DKE43_04660 PF00004 ATPase family associated with various cellular activities (AAA) DKE43_04665 PF13167 GTP-binding GTPase N-terminal DKE43_04665 PF16360 GTP-binding GTPase Middle Region DKE43_04665 PF01926 50S ribosome-binding GTPase DKE43_04670 PF06838 Methionine gamma-lyase DKE43_04675 PF13411 MerR HTH family regulatory protein DKE43_04680 PF03951 Glutamine synthetase, beta-Grasp domain DKE43_04680 PF00120 Glutamine synthetase, catalytic domain DKE43_04690 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_04695 PF04740 LXG domain of WXG superfamily DKE43_04715 PF01569 PAP2 superfamily DKE43_04720 PF08818 Domain of unknown function (DU1801) DKE43_04735 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_04745 PF06912 Protein of unknown function (DUF1275) DKE43_04750 PF01068 ATP dependent DNA ligase domain DKE43_04755 PF02735 Ku70/Ku80 beta-barrel domain DKE43_04760 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) DKE43_04770 PF02082 Transcriptional regulator DKE43_04775 PF05368 NmrA-like family DKE43_04780 PF02754 Cysteine-rich domain DKE43_04785 PF02589 LUD domain DKE43_04785 PF13183 4Fe-4S dicluster domain DKE43_04785 PF11870 Domain of unknown function (DUF3390) DKE43_04790 PF02589 LUD domain DKE43_04815 PF16295 Tetracyclin repressor-like, C-terminal domain DKE43_04815 PF00440 Bacterial regulatory proteins, tetR family DKE43_04820 PF00667 FAD binding domain DKE43_04820 PF00258 Flavodoxin DKE43_04820 PF00175 Oxidoreductase NAD-binding domain DKE43_04820 PF00067 Cytochrome P450 DKE43_04830 PF00089 Trypsin DKE43_04835 PF14040 Deoxyribonuclease NucA/NucB DKE43_04840 PF01740 STAS domain DKE43_04845 PF16800 IseA DL-endopeptidase inhibitor DKE43_04855 PF00717 Peptidase S24-like DKE43_04855 PF01726 LexA DNA binding domain DKE43_04860 PF01476 LysM domain DKE43_04865 PF00239 Resolvase, N terminal domain DKE43_04870 PF05979 Bacterial protein of unknown function (DUF896) DKE43_04875 PF00456 Transketolase, thiamine diphosphate binding domain DKE43_04875 PF02780 Transketolase, C-terminal domain DKE43_04875 PF02779 Transketolase, pyrimidine binding domain DKE43_04880 PF10747 Sporulation inhibitor of replication protein SirA DKE43_04885 PF03672 Uncharacterised protein family (UPF0154) DKE43_04890 PF09388 Spo0E like sporulation regulatory protein DKE43_04895 PF02683 Cytochrome C biogenesis protein transmembrane region DKE43_04900 PF07301 Protein of unknown function (DUF1453) DKE43_04905 PF11084 Protein of unknown function (DUF2621) DKE43_04915 PF08179 Small acid-soluble spore protein P family DKE43_04925 PF00694 Aconitase C-terminal domain DKE43_04925 PF00330 Aconitase family (aconitate hydratase) DKE43_04930 PF00578 AhpC/TSA family DKE43_04935 PF13040 Fur-regulated basic protein B DKE43_04940 PF08177 Small acid-soluble spore protein N family DKE43_04950 PF03061 Thioesterase superfamily DKE43_04960 PF01521 Iron-sulphur cluster biosynthesis DKE43_04965 PF02660 Glycerol-3-phosphate acyltransferase DKE43_04970 PF13380 CoA binding domain DKE43_04980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_04980 PF00204 DNA gyrase B DKE43_04980 PF01751 Toprim domain DKE43_04980 PF00986 DNA gyrase B subunit, carboxyl terminus DKE43_04985 PF03989 DNA gyrase C-terminal domain, beta-propeller DKE43_04985 PF00521 DNA gyrase/topoisomerase IV, subunit A DKE43_04995 PF07690 Major Facilitator Superfamily DKE43_05000 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE43_05010 PF03466 LysR substrate binding domain DKE43_05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_05035 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE43_05040 PF02040 Arsenical pump membrane protein DKE43_05045 PF01022 Bacterial regulatory protein, arsR family DKE43_05050 PF00291 Pyridoxal-phosphate dependent enzyme DKE43_05055 PF01042 Endoribonuclease L-PSP DKE43_05065 PF00440 Bacterial regulatory proteins, tetR family DKE43_05070 PF01494 FAD binding domain DKE43_05085 PF02386 Cation transport protein DKE43_05105 PF00934 PE family DKE43_05105 PF07859 alpha/beta hydrolase fold DKE43_05120 PF00512 His Kinase A (phospho-acceptor) domain DKE43_05120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_05125 PF00072 Response regulator receiver domain DKE43_05125 PF00486 Transcriptional regulatory protein, C terminal DKE43_05130 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain DKE43_05130 PF17189 Glycosyl hydrolase family 30 beta sandwich domain DKE43_05135 PF04616 Glycosyl hydrolases family 43 DKE43_05135 PF03422 Carbohydrate binding module (family 6) DKE43_05140 PF00171 Aldehyde dehydrogenase family DKE43_05145 PF11975 Family 4 glycosyl hydrolase C-terminal domain DKE43_05145 PF02056 Family 4 glycosyl hydrolase DKE43_05170 PF00834 Ribulose-phosphate 3 epimerase family DKE43_05185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_05200 PF01047 MarR family DKE43_05205 PF07690 Major Facilitator Superfamily DKE43_05210 PF01116 Fructose-bisphosphate aldolase class-II DKE43_05215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_05215 PF02378 Phosphotransferase system, EIIC DKE43_05215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_05220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_05220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_05225 PF00294 pfkB family carbohydrate kinase DKE43_05230 PF01380 SIS domain DKE43_05230 PF01418 Helix-turn-helix domain, rpiR family DKE43_05235 PF13091 PLD-like domain DKE43_05255 PF00171 Aldehyde dehydrogenase family DKE43_05265 PF00175 Oxidoreductase NAD-binding domain DKE43_05265 PF00667 FAD binding domain DKE43_05265 PF00258 Flavodoxin DKE43_05270 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DKE43_05270 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DKE43_05275 PF13193 AMP-binding enzyme C-terminal domain DKE43_05275 PF16177 Acetyl-coenzyme A synthetase N-terminus DKE43_05275 PF00501 AMP-binding enzyme DKE43_05280 PF01039 Carboxyl transferase domain DKE43_05285 PF00378 Enoyl-CoA hydratase/isomerase DKE43_05290 PF00682 HMGL-like DKE43_05295 PF00364 Biotin-requiring enzyme DKE43_05300 PF02785 Biotin carboxylase C-terminal domain DKE43_05300 PF00289 Biotin carboxylase, N-terminal domain DKE43_05300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE43_05305 PF00501 AMP-binding enzyme DKE43_05305 PF13193 AMP-binding enzyme C-terminal domain DKE43_05310 PF02770 Acyl-CoA dehydrogenase, middle domain DKE43_05310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE43_05310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE43_05315 PF02638 Glycosyl hydrolase-like 10 DKE43_05325 PF00455 DeoR C terminal sensor domain DKE43_05325 PF08220 DeoR-like helix-turn-helix domain DKE43_05340 PF01565 FAD binding domain DKE43_05340 PF02913 FAD linked oxidases, C-terminal domain DKE43_05345 PF13183 4Fe-4S dicluster domain DKE43_05345 PF02754 Cysteine-rich domain DKE43_05350 PF03323 Bacillus/Clostridium GerA spore germination protein DKE43_05355 PF03845 Spore germination protein DKE43_05370 PF12728 Helix-turn-helix domain DKE43_05380 PF09335 SNARE associated Golgi protein DKE43_05385 PF02602 Uroporphyrinogen-III synthase HemD DKE43_05395 PF00296 Luciferase-like monooxygenase DKE43_05405 PF00881 Nitroreductase family DKE43_05415 PF01047 MarR family DKE43_05420 PF01638 HxlR-like helix-turn-helix DKE43_05445 PF01554 MatE DKE43_05450 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family DKE43_05455 PF01095 Pectinesterase DKE43_05460 PF04239 Protein of unknown function (DUF421) DKE43_05465 PF00355 Rieske [2Fe-2S] domain DKE43_05470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DKE43_05470 PF04324 BFD-like [2Fe-2S] binding domain DKE43_05470 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_05470 PF18267 Rubredoxin NAD+ reductase C-terminal domain DKE43_05470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DKE43_05475 PF01568 Molydopterin dinucleotide binding domain DKE43_05475 PF00384 Molybdopterin oxidoreductase DKE43_05475 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DKE43_05480 PF04324 BFD-like [2Fe-2S] binding domain DKE43_05480 PF18267 Rubredoxin NAD+ reductase C-terminal domain DKE43_05480 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_05480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DKE43_05485 PF07690 Major Facilitator Superfamily DKE43_05490 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DKE43_05490 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_05495 PF01645 Conserved region in glutamate synthase DKE43_05495 PF01493 GXGXG motif DKE43_05495 PF00310 Glutamine amidotransferases class-II DKE43_05495 PF04898 Glutamate synthase central domain DKE43_05500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_05500 PF03466 LysR substrate binding domain DKE43_05505 PF00005 ABC transporter DKE43_05505 PF00664 ABC transporter transmembrane region DKE43_05510 PF00664 ABC transporter transmembrane region DKE43_05510 PF00005 ABC transporter DKE43_05520 PF00583 Acetyltransferase (GNAT) family DKE43_05525 PF00171 Aldehyde dehydrogenase family DKE43_05530 PF01472 PUA domain DKE43_05530 PF00696 Amino acid kinase family DKE43_05535 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKE43_05535 PF03807 NADP oxidoreductase coenzyme F420-dependent DKE43_05540 PF00067 Cytochrome P450 DKE43_05545 PF01568 Molydopterin dinucleotide binding domain DKE43_05545 PF00384 Molybdopterin oxidoreductase DKE43_05545 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DKE43_05550 PF00457 Glycosyl hydrolases family 11 DKE43_05555 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DKE43_05555 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DKE43_05560 PF01261 Xylose isomerase-like TIM barrel DKE43_05565 PF00480 ROK family DKE43_05570 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DKE43_05570 PF04616 Glycosyl hydrolases family 43 DKE43_05580 PF01588 Putative tRNA binding domain DKE43_05590 PF14158 YndJ-like protein DKE43_05595 PF13761 Domain of unknown function (DUF4166) DKE43_05605 PF13305 Tetracyclin repressor-like, C-terminal domain DKE43_05605 PF00440 Bacterial regulatory proteins, tetR family DKE43_05610 PF00753 Metallo-beta-lactamase superfamily DKE43_05615 PF06445 GyrI-like small molecule binding domain DKE43_05620 PF08279 HTH domain DKE43_05620 PF13280 WYL domain DKE43_05630 PF01022 Bacterial regulatory protein, arsR family DKE43_05635 PF00324 Amino acid permease DKE43_05650 PF03972 MmgE/PrpD family DKE43_05655 PF00285 Citrate synthase, C-terminal domain DKE43_05660 PF04238 Protein of unknown function (DUF420) DKE43_05670 PF06725 3D domain DKE43_05670 PF01476 LysM domain DKE43_05675 PF09382 RQC domain DKE43_05675 PF16124 RecQ zinc-binding DKE43_05675 PF00270 DEAD/DEAH box helicase DKE43_05675 PF00271 Helicase conserved C-terminal domain DKE43_05675 PF00570 HRDC domain DKE43_05685 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE43_05695 PF08000 Bacterial PH domain DKE43_05710 PF00171 Aldehyde dehydrogenase family DKE43_05715 PF13243 Squalene-hopene cyclase C-terminal domain DKE43_05715 PF13249 Squalene-hopene cyclase N-terminal domain DKE43_05720 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKE43_05720 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKE43_05725 PF01758 Sodium Bile acid symporter family DKE43_05730 PF02817 e3 binding domain DKE43_05730 PF00364 Biotin-requiring enzyme DKE43_05730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE43_05735 PF00676 Dehydrogenase E1 component DKE43_05735 PF16870 2-oxoglutarate dehydrogenase C-terminal DKE43_05735 PF16078 2-oxoglutarate dehydrogenase N-terminus DKE43_05735 PF02779 Transketolase, pyrimidine binding domain DKE43_05740 PF00092 von Willebrand factor type A domain DKE43_05745 PF07728 AAA domain (dynein-related subfamily) DKE43_05750 PF13627 Prokaryotic lipoprotein-attachment site DKE43_05750 PF00080 Copper/zinc superoxide dismutase (SODC) DKE43_05755 PF00877 NlpC/P60 family DKE43_05755 PF01476 LysM domain DKE43_05760 PF02457 DisA bacterial checkpoint controller nucleotide-binding DKE43_05760 PF10372 Bacterial membrane-spanning protein N-terminus DKE43_05765 PF01554 MatE DKE43_05770 PF02585 GlcNAc-PI de-N-acetylase DKE43_05775 PF08830 Protein of unknown function (DUF1806) DKE43_05785 PF00892 EamA-like transporter family DKE43_05800 PF01638 HxlR-like helix-turn-helix DKE43_05805 PF00881 Nitroreductase family DKE43_05810 PF11755 Protein of unknown function (DUF3311) DKE43_05815 PF00474 Sodium:solute symporter family DKE43_05820 PF03572 Peptidase family S41 DKE43_05820 PF17820 PDZ domain DKE43_05820 PF01471 Putative peptidoglycan binding domain DKE43_05825 PF08241 Methyltransferase domain DKE43_05835 PF02557 D-alanyl-D-alanine carboxypeptidase DKE43_05840 PF01048 Phosphorylase superfamily DKE43_05845 PF14191 YodL-like DKE43_05850 PF01569 PAP2 superfamily DKE43_05855 PF14162 YozD-like protein DKE43_05865 PF06855 YozE SAM-like fold DKE43_05870 PF14122 YokU-like protein, putative antitoxin DKE43_05875 PF12544 Lysine-2,3-aminomutase DKE43_05880 PF13426 PAS domain DKE43_05880 PF00158 Sigma-54 interaction domain DKE43_05880 PF02954 Bacterial regulatory protein, Fis family DKE43_05885 PF00535 Glycosyl transferase family 2 DKE43_05900 PF12996 DUF based on E. rectale Gene description (DUF3880) DKE43_05910 PF02719 Polysaccharide biosynthesis protein DKE43_05915 PF01641 SelR domain DKE43_05920 PF01625 Peptide methionine sulfoxide reductase DKE43_05925 PF01047 MarR family DKE43_05940 PF17431 Uncharacterized YmpT-like DKE43_05945 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) DKE43_05950 PF13472 GDSL-like Lipase/Acylhydrolase family DKE43_05955 PF02630 SCO1/SenC DKE43_05960 PF02645 Uncharacterised protein, DegV family COG1307 DKE43_05965 PF10751 Protein of unknown function (DUF2535) DKE43_05970 PF00585 C-terminal regulatory domain of Threonine dehydratase DKE43_05970 PF00291 Pyridoxal-phosphate dependent enzyme DKE43_05975 PF00158 Sigma-54 interaction domain DKE43_05975 PF08461 Ribonuclease R winged-helix domain DKE43_05980 PF03006 Haemolysin-III related DKE43_05990 PF00186 Dihydrofolate reductase DKE43_05995 PF00303 Thymidylate synthase DKE43_06000 PF04608 Phosphatidylglycerophosphatase A DKE43_06005 PF14005 YpjP-like protein DKE43_06010 PF04445 Putative SAM-dependent methyltransferase DKE43_06015 PF06491 Disulphide isomerase DKE43_06020 PF00920 Dehydratase family DKE43_06025 PF08712 Scaffold protein Nfu/NifU N terminal DKE43_06025 PF13769 Virulence factor DKE43_06030 PF01966 HD domain DKE43_06035 PF00255 Glutathione peroxidase DKE43_06040 PF01268 Formate--tetrahydrofolate ligase DKE43_06045 PF04204 Homoserine O-succinyltransferase DKE43_06050 PF00534 Glycosyl transferases group 1 DKE43_06050 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DKE43_06060 PF00313 'Cold-shock' DNA-binding domain DKE43_06070 PF10782 Zinc-finger DKE43_06075 PF13456 Reverse transcriptase-like DKE43_06080 PF02592 Putative vitamin uptake transporter DKE43_06085 PF13456 Reverse transcriptase-like DKE43_06095 PF01367 5'-3' exonuclease, C-terminal SAM fold DKE43_06095 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DKE43_06100 PF10752 Protein of unknown function (DUF2533) DKE43_06105 PF00350 Dynamin family DKE43_06115 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family DKE43_06120 PF00195 Chalcone and stilbene synthases, N-terminal domain DKE43_06120 PF02797 Chalcone and stilbene synthases, C-terminal domain DKE43_06130 PF00860 Permease family DKE43_06140 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DKE43_06145 PF13307 Helicase C-terminal domain DKE43_06155 PF01170 Putative RNA methylase family UPF0020 DKE43_06155 PF02926 THUMP domain DKE43_06165 PF05103 DivIVA protein DKE43_06175 PF11122 Inner spore coat protein D DKE43_06180 PF13482 RNase_H superfamily DKE43_06185 PF00270 DEAD/DEAH box helicase DKE43_06185 PF00271 Helicase conserved C-terminal domain DKE43_06185 PF09369 Domain of unknown function (DUF1998) DKE43_06190 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE43_06195 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKE43_06205 PF14179 YppG-like protein DKE43_06210 PF08807 Bacterial domain of unknown function (DUF1798) DKE43_06225 PF10720 Protein of unknown function (DUF2515) DKE43_06230 PF03838 Recombination protein U DKE43_06235 PF00905 Penicillin binding protein transpeptidase domain DKE43_06235 PF00912 Transglycosylase DKE43_06245 PF00633 Helix-hairpin-helix motif DKE43_06245 PF10576 Iron-sulfur binding domain of endonuclease III DKE43_06245 PF00730 HhH-GPD superfamily base excision DNA repair protein DKE43_06250 PF07261 Replication initiation and membrane attachment DKE43_06255 PF00152 tRNA synthetases class II (D, K and N) DKE43_06255 PF01336 OB-fold nucleic acid binding domain DKE43_06260 PF17881 Domain of unknown function (DUF5590) DKE43_06260 PF03413 Peptidase propeptide and YPEB domain DKE43_06265 PF14084 Protein of unknown function (DUF4264) DKE43_06270 PF00929 Exonuclease DKE43_06270 PF04851 Type III restriction enzyme, res subunit DKE43_06270 PF13307 Helicase C-terminal domain DKE43_06275 PF02261 Aspartate decarboxylase DKE43_06280 PF02569 Pantoate-beta-alanine ligase DKE43_06285 PF02548 Ketopantoate hydroxymethyltransferase DKE43_06290 PF03099 Biotin/lipoate A/B protein ligase family DKE43_06290 PF02237 Biotin protein ligase C terminal domain DKE43_06290 PF08279 HTH domain DKE43_06295 PF01743 Poly A polymerase head domain DKE43_06295 PF13735 tRNA nucleotidyltransferase domain 2 putative DKE43_06295 PF12627 Probable RNA and SrmB- binding site of polymerase A DKE43_06300 PF00534 Glycosyl transferases group 1 DKE43_06300 PF13439 Glycosyltransferase Family 4 DKE43_06305 PF02585 GlcNAc-PI de-N-acetylase DKE43_06310 PF02142 MGS-like domain DKE43_06315 PF01113 Dihydrodipicolinate reductase, N-terminus DKE43_06315 PF05173 Dihydrodipicolinate reductase, C-terminus DKE43_06320 PF03819 MazG nucleotide pyrophosphohydrolase domain DKE43_06325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKE43_06325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKE43_06330 PF09577 Sporulation protein YpjB (SpoYpjB) DKE43_06335 PF07187 Protein of unknown function (DUF1405) DKE43_06340 PF00032 Cytochrome b(C-terminal)/b6/petD DKE43_06340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DKE43_06345 PF00033 Cytochrome b/b6/petB DKE43_06350 PF00355 Rieske [2Fe-2S] domain DKE43_06355 PF10673 Protein of unknown function (DUF2487) DKE43_06360 PF08858 IDEAL domain DKE43_06360 PF08864 UPF0302 domain DKE43_06370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DKE43_06375 PF02153 Prephenate dehydrogenase DKE43_06375 PF01842 ACT domain DKE43_06380 PF00155 Aminotransferase class I and II DKE43_06385 PF00290 Tryptophan synthase alpha chain DKE43_06390 PF00291 Pyridoxal-phosphate dependent enzyme DKE43_06395 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DKE43_06400 PF00218 Indole-3-glycerol phosphate synthase DKE43_06405 PF00591 Glycosyl transferase family, a/b domain DKE43_06405 PF02885 Glycosyl transferase family, helical bundle domain DKE43_06410 PF00425 chorismate binding enzyme DKE43_06410 PF04715 Anthranilate synthase component I, N terminal region DKE43_06415 PF07736 Chorismate mutase type I DKE43_06420 PF01761 3-dehydroquinate synthase DKE43_06425 PF01264 Chorismate synthase DKE43_06430 PF01739 CheR methyltransferase, SAM binding domain DKE43_06430 PF03705 CheR methyltransferase, all-alpha domain DKE43_06435 PF00334 Nucleoside diphosphate kinase DKE43_06440 PF00348 Polyprenyl synthetase DKE43_06445 PF01209 ubiE/COQ5 methyltransferase family DKE43_06450 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DKE43_06455 PF02081 Tryptophan RNA-binding attenuator protein DKE43_06460 PF01227 GTP cyclohydrolase I DKE43_06465 PF00216 Bacterial DNA-binding protein DKE43_06475 PF09547 Stage IV sporulation protein A (spore_IV_A) DKE43_06485 PF10966 Protein of unknown function (DUF2768) DKE43_06490 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DKE43_06490 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DKE43_06495 PF01926 50S ribosome-binding GTPase DKE43_06495 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DKE43_06505 PF14045 YIEGIA protein DKE43_06515 PF14140 YpzI-like protein DKE43_06520 PF01070 FMN-dependent dehydrogenase DKE43_06525 PF00575 S1 RNA binding domain DKE43_06530 PF02224 Cytidylate kinase DKE43_06535 PF17313 Family of unknown function (DUF5359) DKE43_06540 PF12945 Flagellar protein YcgR DKE43_06540 PF07238 PilZ domain DKE43_06545 PF03413 Peptidase propeptide and YPEB domain DKE43_06545 PF14620 YpeB sporulation DKE43_06550 PF01471 Putative peptidoglycan binding domain DKE43_06550 PF07486 Cell Wall Hydrolase DKE43_06555 PF13367 PrsW family intramembrane metalloprotease DKE43_06565 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DKE43_06565 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DKE43_06570 PF05389 Negative regulator of genetic competence (MecA) DKE43_06575 PF00149 Calcineurin-like phosphoesterase DKE43_06580 PF10864 Protein of unknown function (DUF2663) DKE43_06585 PF01476 LysM domain DKE43_06590 PF02517 CPBP intramembrane metalloprotease DKE43_06595 PF00271 Helicase conserved C-terminal domain DKE43_06595 PF00270 DEAD/DEAH box helicase DKE43_06600 PF14493 Helix-turn-helix domain DKE43_06610 PF12822 ECF transporter, substrate-specific component DKE43_06615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKE43_06615 PF01842 ACT domain DKE43_06615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKE43_06620 PF01510 N-acetylmuramoyl-L-alanine amidase DKE43_06620 PF01476 LysM domain DKE43_06620 PF01471 Putative peptidoglycan binding domain DKE43_06630 PF08281 Sigma-70, region 4 DKE43_06630 PF04542 Sigma-70 region 2 DKE43_06635 PF00672 HAMP domain DKE43_06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_06635 PF18698 Histidine kinase sensor domain DKE43_06635 PF00512 His Kinase A (phospho-acceptor) domain DKE43_06635 PF00989 PAS fold DKE43_06640 PF00486 Transcriptional regulatory protein, C terminal DKE43_06640 PF00072 Response regulator receiver domain DKE43_06645 PF01578 Cytochrome C assembly protein DKE43_06650 PF05140 ResB-like family DKE43_06655 PF00578 AhpC/TSA family DKE43_06660 PF00849 RNA pseudouridylate synthase DKE43_06660 PF01479 S4 domain DKE43_06665 PF07670 Nucleoside recognition DKE43_06670 PF07670 Nucleoside recognition DKE43_06675 PF00768 D-alanyl-D-alanine carboxypeptidase DKE43_06675 PF07943 Penicillin-binding protein 5, C-terminal domain DKE43_06680 PF13047 Protein of unknown function (DUF3907) DKE43_06685 PF04079 Segregation and condensation complex subunit ScpB DKE43_06690 PF02616 Segregation and condensation protein ScpA DKE43_06695 PF09680 Family of unknown function DKE43_06700 PF03745 Domain of unknown function (DUF309) DKE43_06705 PF00583 Acetyltransferase (GNAT) family DKE43_06710 PF00885 6,7-dimethyl-8-ribityllumazine synthase DKE43_06715 PF00925 GTP cyclohydrolase II DKE43_06715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DKE43_06720 PF00677 Lumazine binding domain DKE43_06745 PF07690 Major Facilitator Superfamily DKE43_06750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DKE43_06755 PF06207 Protein of unknown function (DUF1002) DKE43_06760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DKE43_06760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DKE43_06765 PF03323 Bacillus/Clostridium GerA spore germination protein DKE43_06770 PF14097 Stage V sporulation protein AE1 DKE43_06775 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DKE43_06780 PF07451 Stage V sporulation protein AD (SpoVAD) DKE43_06785 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DKE43_06790 PF13782 Stage V sporulation protein AB DKE43_06795 PF12164 Stage V sporulation protein AA DKE43_06800 PF04545 Sigma-70, region 4 DKE43_06800 PF04542 Sigma-70 region 2 DKE43_06800 PF04539 Sigma-70 region 3 DKE43_06805 PF13581 Histidine kinase-like ATPase domain DKE43_06810 PF01740 STAS domain DKE43_06815 PF00768 D-alanyl-D-alanine carboxypeptidase DKE43_06815 PF07943 Penicillin-binding protein 5, C-terminal domain DKE43_06820 PF01048 Phosphorylase superfamily DKE43_06825 PF01676 Metalloenzyme superfamily DKE43_06830 PF00589 Phage integrase family DKE43_06830 PF02899 Phage integrase, N-terminal SAM-like domain DKE43_06835 PF14004 Protein of unknown function (DUF4227) DKE43_06840 PF01475 Ferric uptake regulator family DKE43_06845 PF01944 Stage II sporulation protein M DKE43_06850 PF05922 Peptidase inhibitor I9 DKE43_06850 PF00082 Subtilase family DKE43_06860 PF13673 Acetyltransferase (GNAT) domain DKE43_06870 PF00293 NUDIX domain DKE43_06875 PF00248 Aldo/keto reductase family DKE43_06890 PF12146 Serine aminopeptidase, S33 DKE43_06895 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_06900 PF10827 Protein of unknown function (DUF2552) DKE43_06905 PF01521 Iron-sulphur cluster biosynthesis DKE43_06910 PF03330 Lytic transglycolase DKE43_06915 PF13673 Acetyltransferase (GNAT) domain DKE43_06915 PF04229 GrpB protein DKE43_06920 PF00583 Acetyltransferase (GNAT) family DKE43_06925 PF10787 Uncharacterised protein from bacillus cereus group DKE43_06930 PF00817 impB/mucB/samB family DKE43_06930 PF11799 impB/mucB/samB family C-terminal domain DKE43_06935 PF08863 YolD-like protein DKE43_06940 PF07690 Major Facilitator Superfamily DKE43_06945 PF00485 Phosphoribulokinase / Uridine kinase family DKE43_06950 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE43_06950 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_06955 PF00106 short chain dehydrogenase DKE43_06960 PF00753 Metallo-beta-lactamase superfamily DKE43_06965 PF03807 NADP oxidoreductase coenzyme F420-dependent DKE43_06965 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKE43_06975 PF01546 Peptidase family M20/M25/M40 DKE43_06980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE43_06985 PF12146 Serine aminopeptidase, S33 DKE43_06990 PF12897 Alanine-glyoxylate amino-transferase DKE43_06995 PF12706 Beta-lactamase superfamily domain DKE43_07000 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DKE43_07000 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DKE43_07005 PF00392 Bacterial regulatory proteins, gntR family DKE43_07005 PF07702 UTRA domain DKE43_07010 PF00232 Glycosyl hydrolase family 1 DKE43_07015 PF02378 Phosphotransferase system, EIIC DKE43_07020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DKE43_07025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_07035 PF06800 Sugar transport protein DKE43_07040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKE43_07040 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DKE43_07045 PF11799 impB/mucB/samB family C-terminal domain DKE43_07045 PF11798 IMS family HHH motif DKE43_07045 PF00817 impB/mucB/samB family DKE43_07055 PF02096 60Kd inner membrane protein DKE43_07065 PF01546 Peptidase family M20/M25/M40 DKE43_07065 PF07687 Peptidase dimerisation domain DKE43_07070 PF01039 Carboxyl transferase domain DKE43_07080 PF03734 L,D-transpeptidase catalytic domain DKE43_07085 PF11728 Putative aromatic acid exporter C-terminal domain DKE43_07085 PF06081 Aromatic acid exporter family member 1 DKE43_07090 PF00005 ABC transporter DKE43_07095 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_07100 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_07105 PF06491 Disulphide isomerase DKE43_07110 PF00781 Diacylglycerol kinase catalytic domain DKE43_07120 PF02817 e3 binding domain DKE43_07120 PF00364 Biotin-requiring enzyme DKE43_07120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE43_07125 PF02780 Transketolase, C-terminal domain DKE43_07125 PF02779 Transketolase, pyrimidine binding domain DKE43_07130 PF00676 Dehydrogenase E1 component DKE43_07135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE43_07135 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_07140 PF00871 Acetokinase family DKE43_07145 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DKE43_07145 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DKE43_07150 PF01515 Phosphate acetyl/butaryl transferase DKE43_07155 PF00989 PAS fold DKE43_07155 PF00158 Sigma-54 interaction domain DKE43_07155 PF02954 Bacterial regulatory protein, Fis family DKE43_07160 PF11118 Protein of unknown function (DUF2627) DKE43_07165 PF03009 Glycerophosphoryl diester phosphodiesterase family DKE43_07170 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_07180 PF00072 Response regulator receiver domain DKE43_07180 PF08769 Sporulation initiation factor Spo0A C terminal DKE43_07185 PF17820 PDZ domain DKE43_07185 PF05580 SpoIVB peptidase S55 DKE43_07190 PF13476 AAA domain DKE43_07195 PF02863 Arginine repressor, C-terminal domain DKE43_07195 PF01316 Arginine repressor, DNA binding domain DKE43_07200 PF01479 S4 domain DKE43_07200 PF01728 FtsJ-like methyltransferase DKE43_07205 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DKE43_07205 PF02779 Transketolase, pyrimidine binding domain DKE43_07205 PF02780 Transketolase, C-terminal domain DKE43_07210 PF00348 Polyprenyl synthetase DKE43_07215 PF02609 Exonuclease VII small subunit DKE43_07220 PF02601 Exonuclease VII, large subunit DKE43_07220 PF13742 OB-fold nucleic acid binding domain DKE43_07225 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKE43_07225 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKE43_07230 PF01029 NusB family DKE43_07235 PF03780 Asp23 family, cell envelope-related function DKE43_07240 PF00289 Biotin carboxylase, N-terminal domain DKE43_07240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKE43_07240 PF02785 Biotin carboxylase C-terminal domain DKE43_07245 PF00364 Biotin-requiring enzyme DKE43_07250 PF12685 SpoIIIAH-like protein DKE43_07260 PF09581 Stage III sporulation protein AF (Spore_III_AF) DKE43_07265 PF09546 Stage III sporulation protein AE (spore_III_AE) DKE43_07270 PF06686 Stage III sporulation protein AC/AD protein family DKE43_07275 PF06686 Stage III sporulation protein AC/AD protein family DKE43_07280 PF09548 Stage III sporulation protein AB (spore_III_AB) DKE43_07290 PF10942 Protein of unknown function (DUF2619) DKE43_07300 PF01132 Elongation factor P (EF-P) OB domain DKE43_07300 PF09285 Elongation factor P, C-terminal DKE43_07300 PF08207 Elongation factor P (EF-P) KOW-like domain DKE43_07305 PF00557 Metallopeptidase family M24 DKE43_07305 PF01321 Creatinase/Prolidase N-terminal domain DKE43_07310 PF01220 Dehydroquinase class II DKE43_07315 PF11085 Conserved membrane protein YqhR DKE43_07320 PF07136 Protein of unknown function (DUF1385) DKE43_07330 PF01734 Patatin-like phospholipase DKE43_07335 PF02742 Iron dependent repressor, metal binding and dimerisation domain DKE43_07335 PF01325 Iron dependent repressor, N-terminal DNA binding domain DKE43_07340 PF03099 Biotin/lipoate A/B protein ligase family DKE43_07345 PF00581 Rhodanese-like domain DKE43_07350 PF02347 Glycine cleavage system P-protein DKE43_07355 PF02347 Glycine cleavage system P-protein DKE43_07360 PF08669 Glycine cleavage T-protein C-terminal barrel domain DKE43_07360 PF01571 Aminomethyltransferase folate-binding domain DKE43_07365 PF00176 SNF2 family N-terminal domain DKE43_07365 PF00271 Helicase conserved C-terminal domain DKE43_07370 PF11079 Bacterial protein YqhG of unknown function DKE43_07375 PF08671 Anti-repressor SinI DKE43_07385 PF12389 Camelysin metallo-endopeptidase DKE43_07400 PF13028 Protein of unknown function (DUF3889) DKE43_07405 PF14038 YqzE-like protein DKE43_07425 PF07963 Prokaryotic N-terminal methylation motif DKE43_07430 PF07963 Prokaryotic N-terminal methylation motif DKE43_07435 PF00482 Type II secretion system (T2SS), protein F DKE43_07440 PF00437 Type II/IV secretion system protein DKE43_07450 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain DKE43_07450 PF01740 STAS domain DKE43_07460 PF03960 ArsC family DKE43_07465 PF11117 Protein of unknown function (DUF2626) DKE43_07470 PF00753 Metallo-beta-lactamase superfamily DKE43_07480 PF10958 Protein of unknown function (DUF2759) DKE43_07485 PF01910 Thiamine-binding protein DKE43_07490 PF07690 Major Facilitator Superfamily DKE43_07500 PF00246 Zinc carboxypeptidase DKE43_07505 PF00884 Sulfatase DKE43_07510 PF00480 ROK family DKE43_07515 PF06014 Bacterial protein of unknown function (DUF910) DKE43_07520 PF01694 Rhomboid family DKE43_07525 PF01812 5-formyltetrahydrofolate cyclo-ligase family DKE43_07530 PF00471 Ribosomal protein L33 DKE43_07550 PF00005 ABC transporter DKE43_07555 PF00005 ABC transporter DKE43_07560 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_07565 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_07570 PF12849 PBP superfamily domain DKE43_07580 PF07690 Major Facilitator Superfamily DKE43_07585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DKE43_07585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DKE43_07590 PF04306 Protein of unknown function (DUF456) DKE43_07595 PF06691 Protein of unknown function (DUF1189) DKE43_07600 PF13302 Acetyltransferase (GNAT) domain DKE43_07610 PF04551 GcpE protein DKE43_07625 PF00480 ROK family DKE43_07630 PF01475 Ferric uptake regulator family DKE43_07635 PF00950 ABC 3 transport family DKE43_07640 PF00005 ABC transporter DKE43_07645 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKE43_07645 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKE43_07650 PF11116 Protein of unknown function (DUF2624) DKE43_07655 PF01261 Xylose isomerase-like TIM barrel DKE43_07660 PF00270 DEAD/DEAH box helicase DKE43_07660 PF00271 Helicase conserved C-terminal domain DKE43_07670 PF02401 LytB protein DKE43_07675 PF01784 NIF3 (NGG1p interacting factor 3) DKE43_07680 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DKE43_07685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DKE43_07690 PF03979 Sigma-70 factor, region 1.1 DKE43_07690 PF00140 Sigma-70 factor, region 1.2 DKE43_07690 PF04545 Sigma-70, region 4 DKE43_07690 PF04539 Sigma-70 region 3 DKE43_07690 PF04542 Sigma-70 region 2 DKE43_07695 PF10410 DnaB-helicase binding domain of primase DKE43_07695 PF08275 DNA primase catalytic core, N-terminal domain DKE43_07695 PF01807 CHC2 zinc finger DKE43_07700 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DKE43_07705 PF03618 Kinase/pyrophosphorylase DKE43_07710 PF00571 CBS domain DKE43_07710 PF08279 HTH domain DKE43_07715 PF02092 Glycyl-tRNA synthetase beta subunit DKE43_07720 PF02091 Glycyl-tRNA synthetase alpha subunit DKE43_07725 PF02565 Recombination protein O C terminal DKE43_07725 PF11967 Recombination protein O N terminal DKE43_07730 PF14006 YqzL-like protein DKE43_07735 PF01926 50S ribosome-binding GTPase DKE43_07735 PF07650 KH domain DKE43_07740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE43_07745 PF01219 Prokaryotic diacylglycerol kinase DKE43_07750 PF02130 Uncharacterized protein family UPF0054 DKE43_07755 PF07697 7TM-HD extracellular DKE43_07755 PF01966 HD domain DKE43_07755 PF07698 7TM receptor with intracellular HD hydrolase DKE43_07760 PF02562 PhoH-like protein DKE43_07765 PF06898 Putative stage IV sporulation protein YqfD DKE43_07770 PF07873 YabP family DKE43_07780 PF12127 SigmaW regulon antibacterial DKE43_07785 PF01957 NfeD-like C-terminal, partner-binding DKE43_07785 PF01972 Serine dehydrogenase proteinase DKE43_07790 PF09424 Yqey-like protein DKE43_07795 PF01165 Ribosomal protein S21 DKE43_07800 PF02690 Na+/Pi-cotransporter DKE43_07805 PF01938 TRAM domain DKE43_07805 PF00919 Uncharacterized protein family UPF0004 DKE43_07805 PF04055 Radical SAM superfamily DKE43_07810 PF04452 RNA methyltransferase DKE43_07820 PF01556 DnaJ C terminal domain DKE43_07820 PF00226 DnaJ domain DKE43_07820 PF00684 DnaJ central domain DKE43_07825 PF00012 Hsp70 protein DKE43_07830 PF01025 GrpE DKE43_07835 PF01628 HrcA protein C terminal domain DKE43_07840 PF06969 HemN C-terminal domain DKE43_07840 PF04055 Radical SAM superfamily DKE43_07845 PF06421 GTP-binding protein LepA C-terminus DKE43_07845 PF00679 Elongation factor G C-terminus DKE43_07845 PF03144 Elongation factor Tu domain 2 DKE43_07845 PF00009 Elongation factor Tu GTP binding domain DKE43_07850 PF12438 Protein of unknown function (DUF3679) DKE43_07855 PF07454 Stage II sporulation protein P (SpoIIP) DKE43_07860 PF03418 Germination protease DKE43_07865 PF01649 Ribosomal protein S20 DKE43_07870 PF06144 DNA polymerase III, delta subunit DKE43_07875 PF14141 YqzM-like protein DKE43_07880 PF13567 Domain of unknown function (DUF4131) DKE43_07880 PF03772 Competence protein DKE43_07880 PF00753 Metallo-beta-lactamase superfamily DKE43_07885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE43_07895 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKE43_07895 PF03807 NADP oxidoreductase coenzyme F420-dependent DKE43_07900 PF13649 Methyltransferase domain DKE43_07910 PF01966 HD domain DKE43_07915 PF01467 Cytidylyltransferase-like DKE43_07920 PF01985 CRS1 / YhbY (CRM) domain DKE43_07925 PF08501 Shikimate dehydrogenase substrate binding domain DKE43_07925 PF01488 Shikimate / quinate 5-dehydrogenase DKE43_07925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DKE43_07930 PF01926 50S ribosome-binding GTPase DKE43_07940 PF08970 Sporulation inhibitor A DKE43_07945 PF00657 GDSL-like Lipase/Acylhydrolase DKE43_07950 PF11738 Protein of unknown function (DUF3298) DKE43_07950 PF01522 Polysaccharide deacetylase DKE43_07950 PF13739 Deacetylase PdaC DKE43_07955 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_07960 PF04542 Sigma-70 region 2 DKE43_07960 PF04545 Sigma-70, region 4 DKE43_07965 PF00107 Zinc-binding dehydrogenase DKE43_07965 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_07970 PF00106 short chain dehydrogenase DKE43_07975 PF00106 short chain dehydrogenase DKE43_07980 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DKE43_07985 PF00364 Biotin-requiring enzyme DKE43_07985 PF00561 alpha/beta hydrolase fold DKE43_07990 PF00440 Bacterial regulatory proteins, tetR family DKE43_08000 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE43_08000 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE43_08005 PF13344 Haloacid dehalogenase-like hydrolase DKE43_08005 PF00293 NUDIX domain DKE43_08015 PF11738 Protein of unknown function (DUF3298) DKE43_08015 PF13739 Deacetylase PdaC DKE43_08015 PF01522 Polysaccharide deacetylase DKE43_08050 PF00005 ABC transporter DKE43_08065 PF00083 Sugar (and other) transporter DKE43_08070 PF11762 L-arabinose isomerase C-terminal domain DKE43_08070 PF02610 L-arabinose isomerase DKE43_08075 PF00596 Class II Aldolase and Adducin N-terminal domain DKE43_08085 PF00392 Bacterial regulatory proteins, gntR family DKE43_08095 PF01380 SIS domain DKE43_08100 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DKE43_08105 PF01638 HxlR-like helix-turn-helix DKE43_08110 PF00135 Carboxylesterase family DKE43_08120 PF14176 YxiJ-like protein DKE43_08130 PF05593 RHS Repeat DKE43_08135 PF00905 Penicillin binding protein transpeptidase domain DKE43_08140 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DKE43_08140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE43_08140 PF02770 Acyl-CoA dehydrogenase, middle domain DKE43_08145 PF00005 ABC transporter DKE43_08150 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_08155 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_08160 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_08165 PF05067 Manganese containing catalase DKE43_08170 PF00107 Zinc-binding dehydrogenase DKE43_08170 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_08195 PF00005 ABC transporter DKE43_08200 PF00107 Zinc-binding dehydrogenase DKE43_08200 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_08205 PF08241 Methyltransferase domain DKE43_08215 PF09501 Probable sporulation protein (Bac_small_yrzI) DKE43_08220 PF14143 YrhC-like protein DKE43_08225 PF01053 Cys/Met metabolism PLP-dependent enzyme DKE43_08230 PF00291 Pyridoxal-phosphate dependent enzyme DKE43_08235 PF01048 Phosphorylase superfamily DKE43_08240 PF13649 Methyltransferase domain DKE43_08245 PF10750 Protein of unknown function (DUF2536) DKE43_08250 PF07423 Domain of unknown function (DUF1510) DKE43_08255 PF03717 Penicillin-binding Protein dimerisation domain DKE43_08255 PF00905 Penicillin binding protein transpeptidase domain DKE43_08260 PF01272 Transcription elongation factor, GreA/GreB, C-term DKE43_08260 PF03449 Transcription elongation factor, N-terminal DKE43_08265 PF00485 Phosphoribulokinase / Uridine kinase family DKE43_08285 PF02618 YceG-like family DKE43_08290 PF00108 Thiolase, N-terminal domain DKE43_08290 PF02803 Thiolase, C-terminal domain DKE43_08295 PF13193 AMP-binding enzyme C-terminal domain DKE43_08295 PF00501 AMP-binding enzyme DKE43_08300 PF02632 BioY family DKE43_08305 PF06949 Protein of unknown function (DUF1292) DKE43_08310 PF03652 Holliday junction resolvase DKE43_08315 PF06135 IreB regulatory phosphoprotein DKE43_08320 PF02272 DHHA1 domain DKE43_08320 PF01411 tRNA synthetases class II (A) DKE43_08320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DKE43_08325 PF01594 AI-2E family transporter DKE43_08330 PF00005 ABC transporter DKE43_08335 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_08340 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_08345 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_08360 PF05239 PRC-barrel domain DKE43_08365 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DKE43_08365 PF14490 Helix-hairpin-helix containing domain DKE43_08365 PF13538 UvrD-like helicase C-terminal domain DKE43_08370 PF13181 Tetratricopeptide repeat DKE43_08370 PF07719 Tetratricopeptide repeat DKE43_08380 PF00266 Aminotransferase class-V DKE43_08385 PF02082 Transcriptional regulator DKE43_08390 PF12002 MgsA AAA+ ATPase C terminal DKE43_08390 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKE43_08390 PF16193 AAA C-terminal domain DKE43_08395 PF00899 ThiF family DKE43_08405 PF02938 GAD domain DKE43_08405 PF01336 OB-fold nucleic acid binding domain DKE43_08405 PF00152 tRNA synthetases class II (D, K and N) DKE43_08410 PF13393 Histidyl-tRNA synthetase DKE43_08410 PF03129 Anticodon binding domain DKE43_08415 PF01520 N-acetylmuramoyl-L-alanine amidase DKE43_08415 PF08239 Bacterial SH3 domain DKE43_08420 PF02580 D-Tyr-tRNA(Tyr) deacylase DKE43_08425 PF13291 ACT domain DKE43_08425 PF02824 TGS domain DKE43_08425 PF04607 Region found in RelA / SpoT proteins DKE43_08430 PF00156 Phosphoribosyl transferase domain DKE43_08435 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DKE43_08435 PF17768 RecJ OB domain DKE43_08435 PF02272 DHHA1 domain DKE43_08435 PF01368 DHH family DKE43_08440 PF06305 Lipopolysaccharide assembly protein A domain DKE43_08445 PF02080 TrkA-C domain DKE43_08450 PF07549 SecD/SecF GG Motif DKE43_08450 PF02355 Protein export membrane protein DKE43_08455 PF13797 Post-transcriptional regulator DKE43_08460 PF01943 Polysaccharide biosynthesis protein DKE43_08460 PF14667 Polysaccharide biosynthesis C-terminal domain DKE43_08465 PF04239 Protein of unknown function (DUF421) DKE43_08470 PF12670 Protein of unknown function (DUF3792) DKE43_08475 PF02699 Preprotein translocase subunit DKE43_08480 PF01702 Queuine tRNA-ribosyltransferase DKE43_08485 PF02547 Queuosine biosynthesis protein DKE43_08490 PF11146 Protein of unknown function (DUF2905) DKE43_08495 PF17864 RuvB AAA lid domain DKE43_08495 PF05491 RuvB C-terminal winged helix domain DKE43_08495 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKE43_08500 PF07499 RuvA, C-terminal domain DKE43_08500 PF01330 RuvA N terminal domain DKE43_08505 PF08977 Bypass of Forespore C, N terminal DKE43_08505 PF08955 BofC C-terminal domain DKE43_08520 PF01964 Radical SAM ThiC family DKE43_08520 PF13667 ThiC-associated domain DKE43_08530 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DKE43_08535 PF01476 LysM domain DKE43_08535 PF01476 LysM domain DKE43_08540 PF02445 Quinolinate synthetase A protein DKE43_08545 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DKE43_08545 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DKE43_08550 PF00890 FAD binding domain DKE43_08550 PF02910 Fumarate reductase flavoprotein C-term DKE43_08555 PF00266 Aminotransferase class-V DKE43_08560 PF02829 3H domain DKE43_08560 PF08279 HTH domain DKE43_08565 PF00800 Prephenate dehydratase DKE43_08565 PF01842 ACT domain DKE43_08570 PF01842 ACT domain DKE43_08575 PF01926 50S ribosome-binding GTPase DKE43_08575 PF01018 GTP1/OBG DKE43_08575 PF09269 Domain of unknown function (DUF1967) DKE43_08580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DKE43_08580 PF14682 Sporulation initiation phospho-transferase B, C-terminal DKE43_08585 PF01016 Ribosomal L27 protein DKE43_08590 PF04327 Cysteine protease Prp DKE43_08595 PF00829 Ribosomal prokaryotic L21 protein DKE43_08600 PF02163 Peptidase family M50 DKE43_08605 PF01551 Peptidase family M23 DKE43_08610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DKE43_08615 PF03775 Septum formation inhibitor MinC, C-terminal domain DKE43_08620 PF04093 rod shape-determining protein MreD DKE43_08625 PF04085 rod shape-determining protein MreC DKE43_08635 PF04002 RadC-like JAB domain DKE43_08640 PF02545 Maf-like protein DKE43_08650 PF06750 Bacterial Peptidase A24 N-terminal domain DKE43_08650 PF01478 Type IV leader peptidase family DKE43_08655 PF02875 Mur ligase family, glutamate ligase domain DKE43_08655 PF08245 Mur ligase middle domain DKE43_08660 PF08264 Anticodon-binding domain of tRNA DKE43_08660 PF00133 tRNA synthetases class I (I, L, M and V) DKE43_08660 PF10458 Valyl tRNA synthetase tRNA binding arm DKE43_08675 PF01476 LysM domain DKE43_08680 PF00202 Aminotransferase class-III DKE43_08685 PF00490 Delta-aminolevulinic acid dehydratase DKE43_08690 PF02602 Uroporphyrinogen-III synthase HemD DKE43_08695 PF03900 Porphobilinogen deaminase, C-terminal domain DKE43_08695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DKE43_08700 PF01578 Cytochrome C assembly protein DKE43_08705 PF01488 Shikimate / quinate 5-dehydrogenase DKE43_08705 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DKE43_08705 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DKE43_08715 PF01926 50S ribosome-binding GTPase DKE43_08720 PF00004 ATPase family associated with various cellular activities (AAA) DKE43_08720 PF05362 Lon protease (S16) C-terminal proteolytic domain DKE43_08720 PF02190 ATP-dependent protease La (LON) substrate-binding domain DKE43_08725 PF00004 ATPase family associated with various cellular activities (AAA) DKE43_08725 PF05362 Lon protease (S16) C-terminal proteolytic domain DKE43_08730 PF07724 AAA domain (Cdc48 subfamily) DKE43_08730 PF10431 C-terminal, D2-small domain, of ClpB protein DKE43_08730 PF06689 ClpX C4-type zinc finger DKE43_08735 PF05698 Bacterial trigger factor protein (TF) C-terminus DKE43_08735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKE43_08735 PF05697 Bacterial trigger factor protein (TF) DKE43_08745 PF00694 Aconitase C-terminal domain DKE43_08750 PF00330 Aconitase family (aconitate hydratase) DKE43_08755 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE43_08760 PF08502 LeuA allosteric (dimerisation) domain DKE43_08760 PF00682 HMGL-like DKE43_08765 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DKE43_08765 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DKE43_08770 PF10369 Small subunit of acetolactate synthase DKE43_08770 PF01842 ACT domain DKE43_08775 PF00205 Thiamine pyrophosphate enzyme, central domain DKE43_08775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKE43_08775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKE43_08780 PF01063 Amino-transferase class IV DKE43_08785 PF10282 Lactonase, 7-bladed beta-propeller DKE43_08790 PF06803 Protein of unknown function (DUF1232) DKE43_08795 PF04914 DltD protein DKE43_08800 PF00550 Phosphopantetheine attachment site DKE43_08805 PF03062 MBOAT, membrane-bound O-acyltransferase family DKE43_08810 PF13193 AMP-binding enzyme C-terminal domain DKE43_08810 PF00501 AMP-binding enzyme DKE43_08815 PF12459 D-Ala-teichoic acid biosynthesis protein DKE43_08855 PF12850 Calcineurin-like phosphoesterase superfamily domain DKE43_08860 PF01725 Ham1 family DKE43_08865 PF01138 3' exoribonuclease family, domain 1 DKE43_08865 PF03725 3' exoribonuclease family, domain 2 DKE43_08870 PF10646 Sporulation and spore germination DKE43_08875 PF01177 Asp/Glu/Hydantoin racemase DKE43_08880 PF01047 MarR family DKE43_08885 PF00196 Bacterial regulatory proteins, luxR family DKE43_08890 PF03600 Citrate transporter DKE43_08895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_08895 PF03466 LysR substrate binding domain DKE43_08900 PF04303 PrpF protein DKE43_08905 PF02237 Biotin protein ligase C terminal domain DKE43_08905 PF03099 Biotin/lipoate A/B protein ligase family DKE43_08910 PF03061 Thioesterase superfamily DKE43_08915 PF13085 2Fe-2S iron-sulfur cluster binding domain DKE43_08915 PF13183 4Fe-4S dicluster domain DKE43_08920 PF00890 FAD binding domain DKE43_08920 PF02910 Fumarate reductase flavoprotein C-term DKE43_08925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DKE43_08930 PF10702 Protein of unknown function (DUF2507) DKE43_08935 PF00696 Amino acid kinase family DKE43_08935 PF13840 ACT domain DKE43_08935 PF01842 ACT domain DKE43_08940 PF08459 UvrC Helix-hairpin-helix N-terminal DKE43_08940 PF01541 GIY-YIG catalytic domain DKE43_08940 PF02151 UvrB/uvrC motif DKE43_08945 PF00085 Thioredoxin DKE43_08950 PF06964 Alpha-L-arabinofuranosidase C-terminal domain DKE43_08955 PF00766 Electron transfer flavoprotein FAD-binding domain DKE43_08955 PF01012 Electron transfer flavoprotein domain DKE43_08960 PF01012 Electron transfer flavoprotein domain DKE43_08965 PF00378 Enoyl-CoA hydratase/isomerase DKE43_08970 PF00440 Bacterial regulatory proteins, tetR family DKE43_08970 PF08359 YsiA-like protein, C-terminal region DKE43_08975 PF00501 AMP-binding enzyme DKE43_08975 PF13193 AMP-binding enzyme C-terminal domain DKE43_08985 PF03994 Domain of Unknown Function (DUF350) DKE43_08990 PF00488 MutS domain V DKE43_08990 PF01713 Smr domain DKE43_08995 PF14791 DNA polymerase beta thumb DKE43_08995 PF02811 PHP domain DKE43_08995 PF14716 Helix-hairpin-helix domain DKE43_09000 PF02674 Colicin V production protein DKE43_09005 PF05164 Cell division protein ZapA DKE43_09010 PF11858 Domain of unknown function (DUF3378) DKE43_09010 PF01351 Ribonuclease HII DKE43_09015 PF03483 B3/4 domain DKE43_09015 PF03484 tRNA synthetase B5 domain DKE43_09015 PF03147 Ferredoxin-fold anticodon binding domain DKE43_09015 PF01588 Putative tRNA binding domain DKE43_09015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DKE43_09020 PF01409 tRNA synthetases class II core domain (F) DKE43_09020 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DKE43_09025 PF00588 SpoU rRNA Methylase family DKE43_09025 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKE43_09030 PF14098 Small, acid-soluble spore protein I DKE43_09035 PF02554 Carbon starvation protein CstA DKE43_09035 PF13722 5TM C-terminal transporter carbon starvation CstA DKE43_09040 PF05343 M42 glutamyl aminopeptidase DKE43_09050 PF06961 Protein of unknown function (DUF1294) DKE43_09055 PF00453 Ribosomal protein L20 DKE43_09060 PF01632 Ribosomal protein L35 DKE43_09065 PF05198 Translation initiation factor IF-3, N-terminal domain DKE43_09065 PF00707 Translation initiation factor IF-3, C-terminal domain DKE43_09070 PF04172 LrgB-like family DKE43_09075 PF03788 LrgA family DKE43_09080 PF00072 Response regulator receiver domain DKE43_09080 PF04397 LytTr DNA-binding domain DKE43_09085 PF07694 5TMR of 5TMR-LYT DKE43_09085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_09085 PF06580 Histidine kinase DKE43_09095 PF13426 PAS domain DKE43_09095 PF08447 PAS fold DKE43_09095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_09100 PF03129 Anticodon binding domain DKE43_09100 PF02824 TGS domain DKE43_09100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKE43_09100 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DKE43_09110 PF08812 YtxC-like family DKE43_09115 PF09335 SNARE associated Golgi protein DKE43_09120 PF01695 IstB-like ATP binding protein DKE43_09120 PF07319 Primosomal protein DnaI N-terminus DKE43_09125 PF07261 Replication initiation and membrane attachment DKE43_09130 PF03477 ATP cone domain DKE43_09140 PF02675 S-adenosylmethionine decarboxylase DKE43_09145 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE43_09145 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE43_09150 PF01121 Dephospho-CoA kinase DKE43_09155 PF02659 Putative manganese efflux pump DKE43_09160 PF06827 Zinc finger found in FPG and IleRS DKE43_09160 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DKE43_09160 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DKE43_09165 PF01367 5'-3' exonuclease, C-terminal SAM fold DKE43_09165 PF00476 DNA polymerase family A DKE43_09165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DKE43_09175 PF00512 His Kinase A (phospho-acceptor) domain DKE43_09175 PF00989 PAS fold DKE43_09175 PF16736 Single Cache-like DKE43_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_09180 PF00486 Transcriptional regulatory protein, C terminal DKE43_09180 PF00072 Response regulator receiver domain DKE43_09185 PF00056 lactate/malate dehydrogenase, NAD binding domain DKE43_09185 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKE43_09190 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE43_09195 PF00285 Citrate synthase, C-terminal domain DKE43_09200 PF04284 Protein of unknown function (DUF441) DKE43_09205 PF01594 AI-2E family transporter DKE43_09210 PF04186 FxsA cytoplasmic membrane protein DKE43_09215 PF00391 PEP-utilising enzyme, mobile domain DKE43_09215 PF00224 Pyruvate kinase, barrel domain DKE43_09215 PF02887 Pyruvate kinase, alpha/beta domain DKE43_09220 PF00365 Phosphofructokinase DKE43_09225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DKE43_09230 PF01039 Carboxyl transferase domain DKE43_09230 PF17848 Acetyl-coA carboxylase zinc finger domain DKE43_09235 PF03949 Malic enzyme, NAD binding domain DKE43_09235 PF00390 Malic enzyme, N-terminal domain DKE43_09240 PF01336 OB-fold nucleic acid binding domain DKE43_09240 PF02811 PHP domain DKE43_09240 PF14579 Helix-hairpin-helix motif DKE43_09240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DKE43_09240 PF07733 Bacterial DNA polymerase III alpha NTPase domain DKE43_09245 PF14034 Sporulation protein YtrH DKE43_09260 PF01368 DHH family DKE43_09260 PF02272 DHHA1 domain DKE43_09265 PF14007 YtpI-like protein DKE43_09270 PF00571 CBS domain DKE43_09270 PF03061 Thioesterase superfamily DKE43_09270 PF07085 DRTGG domain DKE43_09270 PF00392 Bacterial regulatory proteins, gntR family DKE43_09285 PF14698 Argininosuccinate lyase C-terminal DKE43_09285 PF00206 Lyase DKE43_09290 PF00764 Arginosuccinate synthase DKE43_09295 PF00994 Probable molybdopterin binding domain DKE43_09300 PF00871 Acetokinase family DKE43_09305 PF02384 N-6 DNA Methylase DKE43_09310 PF08534 Redoxin DKE43_09315 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DKE43_09320 PF11167 Protein of unknown function (DUF2953) DKE43_09325 PF06271 RDD family DKE43_09330 PF01343 Peptidase family S49 DKE43_09335 PF01513 ATP-NAD kinase DKE43_09340 PF00271 Helicase conserved C-terminal domain DKE43_09340 PF00270 DEAD/DEAH box helicase DKE43_09340 PF03880 DbpA RNA binding domain DKE43_09345 PF00487 Fatty acid desaturase DKE43_09350 PF07730 Histidine kinase DKE43_09355 PF00196 Bacterial regulatory proteins, luxR family DKE43_09355 PF00072 Response regulator receiver domain DKE43_09360 PF01497 Periplasmic binding protein DKE43_09365 PF00072 Response regulator receiver domain DKE43_09365 PF00486 Transcriptional regulatory protein, C terminal DKE43_09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_09375 PF01098 Cell cycle protein DKE43_09380 PF03551 Transcriptional regulator PadR-like family DKE43_09385 PF00005 ABC transporter DKE43_09390 PF02687 FtsX-like permease family DKE43_09395 PF01979 Amidohydrolase family DKE43_09400 PF02525 Flavodoxin-like fold DKE43_09420 PF00501 AMP-binding enzyme DKE43_09420 PF13193 AMP-binding enzyme C-terminal domain DKE43_09425 PF00269 Small, acid-soluble spore proteins, alpha/beta type DKE43_09430 PF02568 Thiamine biosynthesis protein (ThiI) DKE43_09430 PF02926 THUMP domain DKE43_09435 PF00266 Aminotransferase class-V DKE43_09440 PF05525 Branched-chain amino acid transport protein DKE43_09445 PF05525 Branched-chain amino acid transport protein DKE43_09450 PF06160 Septation ring formation regulator, EzrA DKE43_09455 PF02811 PHP domain DKE43_09460 PF00440 Bacterial regulatory proteins, tetR family DKE43_09465 PF13185 GAF domain DKE43_09470 PF01479 S4 domain DKE43_09470 PF00163 Ribosomal protein S4/S9 N-terminal domain DKE43_09485 PF00857 Isochorismatase family DKE43_09495 PF01674 Lipase (class 2) DKE43_09500 PF01479 S4 domain DKE43_09500 PF00579 tRNA synthetases class I (W and Y) DKE43_09505 PF13193 AMP-binding enzyme C-terminal domain DKE43_09505 PF00501 AMP-binding enzyme DKE43_09510 PF00583 Acetyltransferase (GNAT) family DKE43_09515 PF00571 CBS domain DKE43_09520 PF00850 Histone deacetylase domain DKE43_09525 PF00356 Bacterial regulatory proteins, lacI family DKE43_09530 PF00793 DAHP synthetase I family DKE43_09530 PF01817 Chorismate mutase type II DKE43_09535 PF11009 Protein of unknown function (DUF2847) DKE43_09540 PF12732 YtxH-like protein DKE43_09545 PF06103 Bacterial protein of unknown function (DUF948) DKE43_09550 PF02875 Mur ligase family, glutamate ligase domain DKE43_09550 PF01225 Mur ligase family, catalytic domain DKE43_09550 PF08245 Mur ligase middle domain DKE43_09555 PF01580 FtsK/SpoIIIE family DKE43_09555 PF09397 Ftsk gamma domain DKE43_09555 PF17854 FtsK alpha domain DKE43_09560 PF01588 Putative tRNA binding domain DKE43_09560 PF14794 Domain of unknown function (DUF4479) DKE43_09565 PF07285 Protein of unknown function (DUF1444) DKE43_09570 PF00085 Thioredoxin DKE43_09580 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ DKE43_09585 PF05343 M42 glutamyl aminopeptidase DKE43_09590 PF03413 Peptidase propeptide and YPEB domain DKE43_09595 PF00390 Malic enzyme, N-terminal domain DKE43_09595 PF03949 Malic enzyme, NAD binding domain DKE43_09600 PF00753 Metallo-beta-lactamase superfamily DKE43_09605 PF02390 Putative methyltransferase DKE43_09610 PF14165 YtzH-like protein DKE43_09615 PF01636 Phosphotransferase enzyme family DKE43_09620 PF00781 Diacylglycerol kinase catalytic domain DKE43_09635 PF00291 Pyridoxal-phosphate dependent enzyme DKE43_09640 PF03575 Peptidase family S51 DKE43_09645 PF01546 Peptidase family M20/M25/M40 DKE43_09650 PF00860 Permease family DKE43_09655 PF08220 DeoR-like helix-turn-helix domain DKE43_09660 PF00849 RNA pseudouridylate synthase DKE43_09660 PF01479 S4 domain DKE43_09665 PF14667 Polysaccharide biosynthesis C-terminal domain DKE43_09665 PF01943 Polysaccharide biosynthesis protein DKE43_09680 PF02028 BCCT, betaine/carnitine/choline family transporter DKE43_09690 PF10957 Sporulation protein Cse60 DKE43_09695 PF00581 Rhodanese-like domain DKE43_09700 PF04854 Protein of unknown function, DUF624 DKE43_09705 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DKE43_09705 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DKE43_09715 PF07470 Glycosyl Hydrolase Family 88 DKE43_09720 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_09725 PF17853 GGDEF-like domain DKE43_09725 PF12833 Helix-turn-helix domain DKE43_09730 PF01638 HxlR-like helix-turn-helix DKE43_09735 PF07690 Major Facilitator Superfamily DKE43_09740 PF00248 Aldo/keto reductase family DKE43_09745 PF13416 Bacterial extracellular solute-binding protein DKE43_09750 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_09755 PF01370 NAD dependent epimerase/dehydratase family DKE43_09760 PF01738 Dienelactone hydrolase family DKE43_09765 PF08264 Anticodon-binding domain of tRNA DKE43_09765 PF00133 tRNA synthetases class I (I, L, M and V) DKE43_09765 PF13603 Leucyl-tRNA synthetase, Domain 2 DKE43_09765 PF09334 tRNA synthetases class I (M) DKE43_09770 PF14074 Protein of unknown function (DUF4257) DKE43_09775 PF13426 PAS domain DKE43_09775 PF01740 STAS domain DKE43_09780 PF04791 LMBR1-like membrane protein DKE43_09785 PF02687 FtsX-like permease family DKE43_09785 PF12704 MacB-like periplasmic core domain DKE43_09790 PF00005 ABC transporter DKE43_09800 PF00005 ABC transporter DKE43_09805 PF00392 Bacterial regulatory proteins, gntR family DKE43_09815 PF10732 Protein of unknown function (DUF2524) DKE43_09820 PF16199 Radical_SAM C-terminal domain DKE43_09820 PF04055 Radical SAM superfamily DKE43_09825 PF06962 Putative rRNA methylase DKE43_09830 PF10776 Protein of unknown function (DUF2600) DKE43_09835 PF12146 Serine aminopeptidase, S33 DKE43_09840 PF00132 Bacterial transferase hexapeptide (six repeats) DKE43_09845 PF00733 Asparagine synthase DKE43_09845 PF13537 Glutamine amidotransferase domain DKE43_09850 PF00438 S-adenosylmethionine synthetase, N-terminal domain DKE43_09850 PF02772 S-adenosylmethionine synthetase, central domain DKE43_09850 PF02773 S-adenosylmethionine synthetase, C-terminal domain DKE43_09855 PF01293 Phosphoenolpyruvate carboxykinase DKE43_09860 PF10763 Protein of unknown function (DUF2584) DKE43_09865 PF00326 Prolyl oligopeptidase family DKE43_09870 PF01593 Flavin containing amine oxidoreductase DKE43_09875 PF00535 Glycosyl transferase family 2 DKE43_09895 PF00005 ABC transporter DKE43_09900 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_09905 PF00293 NUDIX domain DKE43_09910 PF02342 TerD domain DKE43_09930 PF05105 Bacteriophage holin family DKE43_09940 PF00210 Ferritin-like domain DKE43_09950 PF13115 YtkA-like DKE43_09955 PF02664 S-Ribosylhomocysteinase (LuxS) DKE43_09960 PF01809 Putative membrane protein insertion efficiency factor DKE43_09965 PF00484 Carbonic anhydrase DKE43_09970 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment DKE43_09970 PF01297 Zinc-uptake complex component A periplasmic DKE43_09975 PF01197 Ribosomal protein L31 DKE43_09985 PF01654 Cytochrome bd terminal oxidase subunit I DKE43_09990 PF02322 Cytochrome bd terminal oxidase subunit II DKE43_09995 PF07561 Domain of Unknown Function (DUF1540) DKE43_10005 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DKE43_10005 PF13378 Enolase C-terminal domain-like DKE43_10010 PF13193 AMP-binding enzyme C-terminal domain DKE43_10010 PF00501 AMP-binding enzyme DKE43_10015 PF00378 Enoyl-CoA hydratase/isomerase DKE43_10020 PF00561 alpha/beta hydrolase fold DKE43_10025 PF16582 Middle domain of thiamine pyrophosphate DKE43_10025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKE43_10025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKE43_10030 PF00425 chorismate binding enzyme DKE43_10035 PF01040 UbiA prenyltransferase family DKE43_10040 PF01258 Prokaryotic dksA/traR C4-type zinc finger DKE43_10045 PF03073 TspO/MBR family DKE43_10170 PF09515 Thiamine transporter protein (Thia_YuaJ) DKE43_10180 PF00583 Acetyltransferase (GNAT) family DKE43_10185 PF06803 Protein of unknown function (DUF1232) DKE43_10190 PF01098 Cell cycle protein DKE43_10195 PF01098 Cell cycle protein DKE43_10205 PF15975 Flotillin DKE43_10205 PF01145 SPFH domain / Band 7 family DKE43_10215 PF12867 DinB superfamily DKE43_10220 PF00465 Iron-containing alcohol dehydrogenase DKE43_10245 PF01510 N-acetylmuramoyl-L-alanine amidase DKE43_10245 PF01471 Putative peptidoglycan binding domain DKE43_10250 PF04688 SPP1 phage holin DKE43_10255 PF10960 BhlA holin family DKE43_10275 PF09693 Phage uncharacterised protein (Phage_XkdX) DKE43_10280 PF09636 XkdW protein DKE43_10295 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) DKE43_10300 PF04865 Baseplate J-like protein DKE43_10305 PF10934 Protein of unknown function (DUF2634) DKE43_10310 PF10844 Protein of unknown function (DUF2577) DKE43_10320 PF01476 LysM domain DKE43_10325 PF01464 Transglycosylase SLT domain DKE43_10325 PF01464 Transglycosylase SLT domain DKE43_10335 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC DKE43_10345 PF09393 Phage tail tube protein DKE43_10350 PF04984 Phage tail sheath protein subtilisin-like domain DKE43_10350 PF17482 Phage tail sheath C-terminal domain DKE43_10350 PF17481 Phage tail sheath protein beta-sandwich domain DKE43_10365 PF04883 Bacteriophage HK97-gp10, putative tail-component DKE43_10370 PF12206 Domain of unknown function (DUF3599) DKE43_10375 PF11436 Protein of unknown function (DUF3199) DKE43_10380 PF05065 Phage capsid family DKE43_10385 PF14550 Putative phage serine protease XkdF DKE43_10390 PF04860 Phage portal protein DKE43_10395 PF17288 Terminase RNAseH like domain DKE43_10395 PF04466 Phage terminase large subunit DKE43_10400 PF10668 Phage terminase small subunit DKE43_10405 PF08281 Sigma-70, region 4 DKE43_10410 PF17356 Phage-like element PBSX protein XtrA DKE43_10415 PF05866 Endodeoxyribonuclease RusA DKE43_10430 PF01381 Helix-turn-helix DKE43_10440 PF04055 Radical SAM superfamily DKE43_10440 PF06968 Biotin and Thiamin Synthesis associated domain DKE43_10450 PF02673 Bacitracin resistance protein BacA DKE43_10455 PF01594 AI-2E family transporter DKE43_10470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DKE43_10470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DKE43_10475 PF01965 DJ-1/PfpI family DKE43_10480 PF02743 Cache domain DKE43_10480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_10480 PF00672 HAMP domain DKE43_10485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_10485 PF00672 HAMP domain DKE43_10485 PF02743 Cache domain DKE43_10490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_10490 PF02743 Cache domain DKE43_10490 PF00672 HAMP domain DKE43_10495 PF00672 HAMP domain DKE43_10495 PF02743 Cache domain DKE43_10495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_10510 PF03060 Nitronate monooxygenase DKE43_10515 PF01894 Uncharacterised protein family UPF0047 DKE43_10520 PF00571 CBS domain DKE43_10520 PF03471 Transporter associated domain DKE43_10520 PF01595 Cyclin M transmembrane N-terminal domain DKE43_10525 PF04298 Putative neutral zinc metallopeptidase DKE43_10535 PF07885 Ion channel DKE43_10535 PF02254 TrkA-N domain DKE43_10540 PF08868 YugN-like family DKE43_10550 PF00342 Phosphoglucose isomerase DKE43_10555 PF00465 Iron-containing alcohol dehydrogenase DKE43_10560 PF00465 Iron-containing alcohol dehydrogenase DKE43_10565 PF04070 Domain of unknown function (DUF378) DKE43_10570 PF00575 S1 RNA binding domain DKE43_10575 PF00155 Aminotransferase class I and II DKE43_10580 PF01037 Lrp/AsnC ligand binding domain DKE43_10585 PF00561 alpha/beta hydrolase fold DKE43_10585 PF08386 TAP-like protein DKE43_10590 PF08958 Domain of unknown function (DUF1871) DKE43_10595 PF00155 Aminotransferase class I and II DKE43_10600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_10600 PF00512 His Kinase A (phospho-acceptor) domain DKE43_10610 PF08810 Kinase associated protein B DKE43_10615 PF00929 Exonuclease DKE43_10620 PF07690 Major Facilitator Superfamily DKE43_10625 PF00905 Penicillin binding protein transpeptidase domain DKE43_10625 PF00912 Transglycosylase DKE43_10630 PF04134 Protein of unknown function, DUF393 DKE43_10640 PF17328 Family of unknown function (DUF5366) DKE43_10645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DKE43_10645 PF17203 Single cache domain 3 DKE43_10645 PF00989 PAS fold DKE43_10645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_10650 PF00072 Response regulator receiver domain DKE43_10675 PF03390 2-hydroxycarboxylate transporter family DKE43_10685 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DKE43_10685 PF00361 Proton-conducting membrane transporter DKE43_10685 PF13244 Domain of unknown function (DUF4040) DKE43_10690 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter DKE43_10695 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DKE43_10700 PF00361 Proton-conducting membrane transporter DKE43_10705 PF01899 Na+/H+ ion antiporter subunit DKE43_10710 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) DKE43_10715 PF03334 Na+/H+ antiporter subunit DKE43_10720 PF03061 Thioesterase superfamily DKE43_10725 PF00196 Bacterial regulatory proteins, luxR family DKE43_10725 PF00072 Response regulator receiver domain DKE43_10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_10730 PF07730 Histidine kinase DKE43_10740 PF00348 Polyprenyl synthetase DKE43_10745 PF08181 DegQ (SacQ) family DKE43_10755 PF00563 EAL domain DKE43_10755 PF08668 HDOD domain DKE43_10760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DKE43_10760 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DKE43_10760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DKE43_10765 PF00857 Isochorismatase family DKE43_10770 PF07997 Protein of unknown function (DUF1694) DKE43_10775 PF14166 YueH-like protein DKE43_10785 PF10676 Spore germination protein gerPA/gerPF DKE43_10790 PF01594 AI-2E family transporter DKE43_10795 PF10842 Protein of unknown function (DUF2642) DKE43_10805 PF01966 HD domain DKE43_10810 PF00106 short chain dehydrogenase DKE43_10815 PF17355 Family of unknown function (DUF5383) DKE43_10825 PF12538 DNA transporter DKE43_10825 PF01580 FtsK/SpoIIIE family DKE43_10830 PF10140 WXG100 protein secretion system (Wss), protein YukC DKE43_10835 PF08817 WXG100 protein secretion system (Wss), protein YukD DKE43_10840 PF06013 Proteins of 100 residues with WXG DKE43_10845 PF17853 GGDEF-like domain DKE43_10845 PF13556 PucR C-terminal helix-turn-helix domain DKE43_10845 PF06018 CodY GAF-like domain DKE43_10850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DKE43_10850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DKE43_10855 PF02632 BioY family DKE43_10860 PF07070 SpoOM protein DKE43_10865 PF03553 Na+/H+ antiporter family DKE43_10865 PF13726 Na+-H+ antiporter family DKE43_10870 PF02789 Cytosol aminopeptidase family, N-terminal domain DKE43_10870 PF00883 Cytosol aminopeptidase family, catalytic domain DKE43_10875 PF02681 Divergent PAP2 family DKE43_10880 PF06725 3D domain DKE43_10885 PF14068 Putative membrane protein DKE43_10890 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_10895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_10910 PF01521 Iron-sulphur cluster biosynthesis DKE43_10915 PF01678 Diaminopimelate epimerase DKE43_10920 PF07293 Protein of unknown function (DUF1450) DKE43_10925 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_10935 PF07315 Protein of unknown function (DUF1462) DKE43_10940 PF01106 NifU-like domain DKE43_10950 PF07676 WD40-like Beta Propeller Repeat DKE43_10950 PF00326 Prolyl oligopeptidase family DKE43_10955 PF00288 GHMP kinases N terminal domain DKE43_10955 PF08544 GHMP kinases C terminal DKE43_10960 PF00291 Pyridoxal-phosphate dependent enzyme DKE43_10965 PF00742 Homoserine dehydrogenase DKE43_10965 PF01842 ACT domain DKE43_10965 PF03447 Homoserine dehydrogenase, NAD binding domain DKE43_10975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKE43_10975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKE43_10985 PF04608 Phosphatidylglycerophosphatase A DKE43_10990 PF13344 Haloacid dehalogenase-like hydrolase DKE43_10995 PF01934 Protein of unknown function DUF86 DKE43_11000 PF06265 Protein of unknown function (DUF1027) DKE43_11005 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DKE43_11010 PF04055 Radical SAM superfamily DKE43_11010 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DKE43_11015 PF01551 Peptidase family M23 DKE43_11020 PF09560 Sporulation protein YunB (Spo_YunB) DKE43_11025 PF08827 Domain of unknown function (DUF1805) DKE43_11030 PF02872 5'-nucleotidase, C-terminal domain DKE43_11035 PF01904 Protein of unknown function DUF72 DKE43_11040 PF17853 GGDEF-like domain DKE43_11040 PF13556 PucR C-terminal helix-turn-helix domain DKE43_11040 PF07905 Purine catabolism regulatory protein-like family DKE43_11050 PF07690 Major Facilitator Superfamily DKE43_11055 PF00266 Aminotransferase class-V DKE43_11070 PF01032 FecCD transport family DKE43_11075 PF01032 FecCD transport family DKE43_11080 PF01497 Periplasmic binding protein DKE43_11090 PF06146 Phosphate-starvation-inducible E DKE43_11095 PF00512 His Kinase A (phospho-acceptor) domain DKE43_11100 PF00486 Transcriptional regulatory protein, C terminal DKE43_11100 PF00072 Response regulator receiver domain DKE43_11105 PF04235 Protein of unknown function (DUF418) DKE43_11115 PF02525 Flavodoxin-like fold DKE43_11125 PF18766 SWI2/SNF2 ATPase DKE43_11125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DKE43_11125 PF12008 Type I restriction and modification enzyme - subunit R C terminal DKE43_11140 PF12161 HsdM N-terminal domain DKE43_11140 PF02384 N-6 DNA Methylase DKE43_11150 PF01458 Uncharacterized protein family (UPF0051) DKE43_11155 PF01592 NifU-like N terminal domain DKE43_11160 PF00266 Aminotransferase class-V DKE43_11165 PF01458 Uncharacterized protein family (UPF0051) DKE43_11170 PF00005 ABC transporter DKE43_11175 PF02627 Carboxymuconolactone decarboxylase family DKE43_11180 PF03180 NLPA lipoprotein DKE43_11185 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11190 PF09383 NIL domain DKE43_11190 PF00005 ABC transporter DKE43_11195 PF02036 SCP-2 sterol transfer family DKE43_11200 PF00085 Thioredoxin DKE43_11205 PF01751 Toprim domain DKE43_11210 PF10830 Protein of unknown function (DUF2553) DKE43_11215 PF01597 Glycine cleavage H-protein DKE43_11220 PF03960 ArsC family DKE43_11225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE43_11225 PF02770 Acyl-CoA dehydrogenase, middle domain DKE43_11225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE43_11230 PF02803 Thiolase, C-terminal domain DKE43_11230 PF00108 Thiolase, N-terminal domain DKE43_11235 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DKE43_11235 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DKE43_11235 PF00378 Enoyl-CoA hydratase/isomerase DKE43_11240 PF14115 YuzL-like protein DKE43_11250 PF07875 Coat F domain DKE43_11265 PF10835 Protein of unknown function (DUF2573) DKE43_11270 PF00005 ABC transporter DKE43_11280 PF00106 short chain dehydrogenase DKE43_11285 PF13180 PDZ domain DKE43_11290 PF00072 Response regulator receiver domain DKE43_11290 PF00486 Transcriptional regulatory protein, C terminal DKE43_11295 PF00512 His Kinase A (phospho-acceptor) domain DKE43_11295 PF00672 HAMP domain DKE43_11295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_11300 PF00440 Bacterial regulatory proteins, tetR family DKE43_11305 PF00206 Lyase DKE43_11305 PF10415 Fumarase C C-terminus DKE43_11310 PF13113 Protein of unknown function (DUF3970) DKE43_11315 PF03323 Bacillus/Clostridium GerA spore germination protein DKE43_11320 PF03845 Spore germination protein DKE43_11325 PF05504 Spore germination B3/ GerAC like, C-terminal DKE43_11335 PF00196 Bacterial regulatory proteins, luxR family DKE43_11335 PF00072 Response regulator receiver domain DKE43_11340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_11340 PF00672 HAMP domain DKE43_11340 PF07730 Histidine kinase DKE43_11345 PF09922 Cell wall-active antibiotics response 4TMS YvqF DKE43_11355 PF04012 PspA/IM30 family DKE43_11365 PF01923 Cobalamin adenosyltransferase DKE43_11370 PF00005 ABC transporter DKE43_11375 PF01032 FecCD transport family DKE43_11380 PF01497 Periplasmic binding protein DKE43_11385 PF00295 Glycosyl hydrolases family 28 DKE43_11390 PF08666 SAF domain DKE43_11390 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DKE43_11395 PF08125 Mannitol dehydrogenase C-terminal domain DKE43_11395 PF01232 Mannitol dehydrogenase Rossmann domain DKE43_11400 PF00356 Bacterial regulatory proteins, lacI family DKE43_11405 PF02614 Glucuronate isomerase DKE43_11410 PF00512 His Kinase A (phospho-acceptor) domain DKE43_11410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_11415 PF00072 Response regulator receiver domain DKE43_11415 PF00486 Transcriptional regulatory protein, C terminal DKE43_11420 PF00005 ABC transporter DKE43_11425 PF01032 FecCD transport family DKE43_11430 PF01032 FecCD transport family DKE43_11435 PF01497 Periplasmic binding protein DKE43_11440 PF13520 Amino acid permease DKE43_11450 PF09575 Small spore protein J (Spore_SspJ) DKE43_11460 PF04307 LexA-binding, inner membrane-associated putative hydrolase DKE43_11465 PF00884 Sulfatase DKE43_11475 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11480 PF00248 Aldo/keto reductase family DKE43_11485 PF00480 ROK family DKE43_11490 PF00999 Sodium/hydrogen exchanger family DKE43_11500 PF03458 UPF0126 domain DKE43_11505 PF02600 Disulfide bond formation protein DsbB DKE43_11510 PF13462 Thioredoxin DKE43_11515 PF00403 Heavy-metal-associated domain DKE43_11520 PF00005 ABC transporter DKE43_11525 PF00950 ABC 3 transport family DKE43_11530 PF01297 Zinc-uptake complex component A periplasmic DKE43_11540 PF00440 Bacterial regulatory proteins, tetR family DKE43_11540 PF13977 BetI-type transcriptional repressor, C-terminal DKE43_11545 PF08664 YcbB domain DKE43_11545 PF00072 Response regulator receiver domain DKE43_11550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_11555 PF10415 Fumarase C C-terminus DKE43_11555 PF00206 Lyase DKE43_11560 PF00375 Sodium:dicarboxylate symporter family DKE43_11565 PF00403 Heavy-metal-associated domain DKE43_11570 PF00403 Heavy-metal-associated domain DKE43_11575 PF02583 Metal-sensitive transcriptional repressor DKE43_11585 PF00990 Diguanylate cyclase, GGDEF domain DKE43_11585 PF00072 Response regulator receiver domain DKE43_11610 PF01668 SmpB protein DKE43_11615 PF17876 Cold shock domain DKE43_11615 PF08206 Ribonuclease B OB domain DKE43_11615 PF00575 S1 RNA binding domain DKE43_11615 PF00773 RNB domain DKE43_11620 PF12146 Serine aminopeptidase, S33 DKE43_11625 PF03840 Preprotein translocase SecG subunit DKE43_11630 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DKE43_11630 PF18277 AbrB C-terminal domain DKE43_11635 PF01381 Helix-turn-helix DKE43_11650 PF01638 HxlR-like helix-turn-helix DKE43_11655 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DKE43_11665 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11670 PF00005 ABC transporter DKE43_11670 PF00571 CBS domain DKE43_11675 PF12802 MarR family DKE43_11680 PF01914 MarC family integral membrane protein DKE43_11690 PF00583 Acetyltransferase (GNAT) family DKE43_11710 PF00005 ABC transporter DKE43_11720 PF00113 Enolase, C-terminal TIM barrel domain DKE43_11720 PF03952 Enolase, N-terminal domain DKE43_11725 PF01676 Metalloenzyme superfamily DKE43_11725 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DKE43_11730 PF00121 Triosephosphate isomerase DKE43_11735 PF00162 Phosphoglycerate kinase DKE43_11740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKE43_11740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKE43_11745 PF04198 Putative sugar-binding domain DKE43_11750 PF00324 Amino acid permease DKE43_11755 PF00202 Aminotransferase class-III DKE43_11760 PF13426 PAS domain DKE43_11760 PF02954 Bacterial regulatory protein, Fis family DKE43_11760 PF00158 Sigma-54 interaction domain DKE43_11765 PF00392 Bacterial regulatory proteins, gntR family DKE43_11765 PF07729 FCD domain DKE43_11770 PF04552 Sigma-54, DNA binding domain DKE43_11770 PF00309 Sigma-54 factor, Activator interacting domain (AID) DKE43_11770 PF04963 Sigma-54 factor, core binding domain DKE43_11775 PF09628 YvfG protein DKE43_11780 PF01554 MatE DKE43_11785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_11785 PF00005 ABC transporter DKE43_11790 PF00005 ABC transporter DKE43_11790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKE43_11795 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11800 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKE43_11810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DKE43_11815 PF17836 PglD N-terminal domain DKE43_11815 PF00132 Bacterial transferase hexapeptide (six repeats) DKE43_11820 PF02397 Bacterial sugar transferase DKE43_11825 PF14667 Polysaccharide biosynthesis C-terminal domain DKE43_11825 PF01943 Polysaccharide biosynthesis protein DKE43_11830 PF04230 Polysaccharide pyruvyl transferase DKE43_11835 PF00535 Glycosyl transferase family 2 DKE43_11845 PF13439 Glycosyltransferase Family 4 DKE43_11845 PF00534 Glycosyl transferases group 1 DKE43_11850 PF00535 Glycosyl transferase family 2 DKE43_11855 PF00534 Glycosyl transferases group 1 DKE43_11855 PF13439 Glycosyltransferase Family 4 DKE43_11860 PF02719 Polysaccharide biosynthesis protein DKE43_11865 PF13614 AAA domain DKE43_11870 PF02706 Chain length determinant protein DKE43_11875 PF01381 Helix-turn-helix DKE43_11875 PF08671 Anti-repressor SinI DKE43_11885 PF01497 Periplasmic binding protein DKE43_11890 PF01032 FecCD transport family DKE43_11895 PF01032 FecCD transport family DKE43_11900 PF11738 Protein of unknown function (DUF3298) DKE43_11900 PF13739 Deacetylase PdaC DKE43_11900 PF01522 Polysaccharide deacetylase DKE43_11910 PF00005 ABC transporter DKE43_11915 PF00005 ABC transporter DKE43_11920 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11920 PF12911 N-terminal TM domain of oligopeptide transport permease C DKE43_11925 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_11930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKE43_11935 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DKE43_11940 PF01497 Periplasmic binding protein DKE43_11950 PF00574 Clp protease DKE43_11955 PF03641 Possible lysine decarboxylase DKE43_11960 PF03819 MazG nucleotide pyrophosphohydrolase domain DKE43_11965 PF01740 STAS domain DKE43_11965 PF00916 Sulfate permease family DKE43_11970 PF00484 Carbonic anhydrase DKE43_11975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKE43_11975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKE43_11980 PF00545 ribonuclease DKE43_11985 PF00797 N-acetyltransferase DKE43_11990 PF00381 PTS HPr component phosphorylation site DKE43_11995 PF10298 WhiA N-terminal LAGLIDADG-like domain DKE43_11995 PF14527 WhiA LAGLIDADG-like domain DKE43_11995 PF02650 WhiA C-terminal HTH domain DKE43_12000 PF01933 Uncharacterised protein family UPF0052 DKE43_12005 PF03668 P-loop ATPase protein family DKE43_12010 PF00293 NUDIX domain DKE43_12015 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_12020 PF00877 NlpC/P60 family DKE43_12030 PF01502 Phosphoribosyl-AMP cyclohydrolase DKE43_12030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DKE43_12035 PF00977 Histidine biosynthesis protein DKE43_12040 PF00977 Histidine biosynthesis protein DKE43_12045 PF00117 Glutamine amidotransferase class-I DKE43_12050 PF00475 Imidazoleglycerol-phosphate dehydratase DKE43_12055 PF00815 Histidinol dehydrogenase DKE43_12060 PF01634 ATP phosphoribosyltransferase DKE43_12065 PF13393 Histidyl-tRNA synthetase DKE43_12070 PF13529 Peptidase_C39 like family DKE43_12075 PF13460 NAD(P)H-binding DKE43_12080 PF02082 Transcriptional regulator DKE43_12085 PF14602 Hexapeptide repeat of succinyl-transferase DKE43_12090 PF13419 Haloacid dehalogenase-like hydrolase DKE43_12095 PF07670 Nucleoside recognition DKE43_12100 PF01790 Prolipoprotein diacylglyceryl transferase DKE43_12105 PF02603 HPr Serine kinase N terminus DKE43_12105 PF07475 HPr Serine kinase C-terminal domain DKE43_12110 PF01979 Amidohydrolase family DKE43_12115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DKE43_12125 PF00149 Calcineurin-like phosphoesterase DKE43_12130 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DKE43_12135 PF04024 PspC domain DKE43_12140 PF13349 Putative adhesin DKE43_12155 PF17755 UvrA DNA-binding domain DKE43_12155 PF17760 UvrA interaction domain DKE43_12155 PF00005 ABC transporter DKE43_12160 PF17757 UvrB interaction domain DKE43_12160 PF12344 Ultra-violet resistance protein B DKE43_12160 PF02151 UvrB/uvrC motif DKE43_12160 PF04851 Type III restriction enzyme, res subunit DKE43_12160 PF00271 Helicase conserved C-terminal domain DKE43_12165 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) DKE43_12175 PF00391 PEP-utilising enzyme, mobile domain DKE43_12175 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DKE43_12180 PF00440 Bacterial regulatory proteins, tetR family DKE43_12185 PF07690 Major Facilitator Superfamily DKE43_12195 PF00072 Response regulator receiver domain DKE43_12195 PF00486 Transcriptional regulatory protein, C terminal DKE43_12200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_12200 PF00512 His Kinase A (phospho-acceptor) domain DKE43_12200 PF00989 PAS fold DKE43_12200 PF16736 Single Cache-like DKE43_12205 PF00324 Amino acid permease DKE43_12210 PF00881 Nitroreductase family DKE43_12215 PF01638 HxlR-like helix-turn-helix DKE43_12220 PF17820 PDZ domain DKE43_12225 PF17423 Swarming motility protein DKE43_12230 PF03572 Peptidase family S41 DKE43_12230 PF17820 PDZ domain DKE43_12230 PF01471 Putative peptidoglycan binding domain DKE43_12235 PF01925 Sulfite exporter TauE/SafE DKE43_12240 PF00877 NlpC/P60 family DKE43_12245 PF02687 FtsX-like permease family DKE43_12245 PF18075 FtsX extracellular domain DKE43_12250 PF00005 ABC transporter DKE43_12255 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DKE43_12260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKE43_12260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKE43_12280 PF01043 SecA preprotein cross-linking domain DKE43_12280 PF07517 SecA DEAD-like domain DKE43_12280 PF02810 SEC-C motif DKE43_12280 PF07516 SecA Wing and Scaffold domain DKE43_12285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DKE43_12285 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DKE43_12290 PF02743 Cache domain DKE43_12290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_12290 PF00672 HAMP domain DKE43_12305 PF02561 Flagellar protein FliS DKE43_12310 PF07195 Flagellar hook-associated protein 2 C-terminus DKE43_12310 PF07196 Flagellin hook IN motif DKE43_12310 PF02465 Flagellar hook-associated protein 2 N-terminus DKE43_12315 PF03646 FlaG protein DKE43_12320 PF02599 Global regulator protein family DKE43_12325 PF02623 FliW protein DKE43_12335 PF00669 Bacterial flagellin N-terminal helical region DKE43_12335 PF00700 Bacterial flagellin C-terminal helical region DKE43_12340 PF00460 Flagella basal body rod protein DKE43_12340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DKE43_12345 PF05130 FlgN protein DKE43_12365 PF10719 Late competence development protein ComFB DKE43_12370 PF04851 Type III restriction enzyme, res subunit DKE43_12370 PF00271 Helicase conserved C-terminal domain DKE43_12375 PF02645 Uncharacterised protein, DegV family COG1307 DKE43_12380 PF00072 Response regulator receiver domain DKE43_12380 PF00196 Bacterial regulatory proteins, luxR family DKE43_12385 PF05384 Sensor protein DegS DKE43_12385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_12385 PF07730 Histidine kinase DKE43_12390 PF01205 Uncharacterized protein family UPF0029 DKE43_12390 PF09186 Domain of unknown function (DUF1949) DKE43_12395 PF03816 Cell envelope-related transcriptional attenuator domain DKE43_12400 PF00953 Glycosyl transferase family 4 DKE43_12410 PF00535 Glycosyl transferase family 2 DKE43_12415 PF02706 Chain length determinant protein DKE43_12420 PF04932 O-Antigen ligase DKE43_12425 PF16363 GDP-mannose 4,6 dehydratase DKE43_12430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKE43_12430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKE43_12430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKE43_12435 PF00534 Glycosyl transferases group 1 DKE43_12435 PF13439 Glycosyltransferase Family 4 DKE43_12440 PF14667 Polysaccharide biosynthesis C-terminal domain DKE43_12440 PF01943 Polysaccharide biosynthesis protein DKE43_12445 PF02397 Bacterial sugar transferase DKE43_12455 PF01520 N-acetylmuramoyl-L-alanine amidase DKE43_12455 PF04122 Putative cell wall binding repeat 2 DKE43_12460 PF04122 Putative cell wall binding repeat 2 DKE43_12460 PF08486 Stage II sporulation protein DKE43_12470 PF03816 Cell envelope-related transcriptional attenuator domain DKE43_12475 PF02350 UDP-N-acetylglucosamine 2-epimerase DKE43_12480 PF00483 Nucleotidyl transferase DKE43_12485 PF00005 ABC transporter DKE43_12490 PF01061 ABC-2 type transporter DKE43_12500 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DKE43_12510 PF01467 Cytidylyltransferase-like DKE43_12515 PF03808 Glycosyl transferase WecB/TagA/CpsF family DKE43_12520 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DKE43_12530 PF08239 Bacterial SH3 domain DKE43_12530 PF05036 Sporulation related domain DKE43_12530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DKE43_12535 PF01238 Phosphomannose isomerase type I DKE43_12540 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_12545 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_12550 PF01547 Bacterial extracellular solute-binding protein DKE43_12555 PF00072 Response regulator receiver domain DKE43_12555 PF00196 Bacterial regulatory proteins, luxR family DKE43_12560 PF06580 Histidine kinase DKE43_12560 PF02743 Cache domain DKE43_12560 PF00672 HAMP domain DKE43_12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_12570 PF00583 Acetyltransferase (GNAT) family DKE43_12575 PF01081 KDPG and KHG aldolase DKE43_12580 PF00294 pfkB family carbohydrate kinase DKE43_12585 PF00356 Bacterial regulatory proteins, lacI family DKE43_12590 PF04962 KduI/IolB family DKE43_12600 PF03323 Bacillus/Clostridium GerA spore germination protein DKE43_12605 PF03845 Spore germination protein DKE43_12610 PF05504 Spore germination B3/ GerAC like, C-terminal DKE43_12615 PF00535 Glycosyl transferase family 2 DKE43_12615 PF00534 Glycosyl transferases group 1 DKE43_12620 PF00083 Sugar (and other) transporter DKE43_12625 PF03816 Cell envelope-related transcriptional attenuator domain DKE43_12640 PF00877 NlpC/P60 family DKE43_12645 PF09587 Bacterial capsule synthesis protein PGA_cap DKE43_12650 PF14102 Capsule biosynthesis CapC DKE43_12655 PF08245 Mur ligase middle domain DKE43_12660 PF03323 Bacillus/Clostridium GerA spore germination protein DKE43_12675 PF00356 Bacterial regulatory proteins, lacI family DKE43_12680 PF00294 pfkB family carbohydrate kinase DKE43_12685 PF05025 RbsD / FucU transport protein family DKE43_12690 PF00005 ABC transporter DKE43_12695 PF02653 Branched-chain amino acid transport system / permease component DKE43_12700 PF13407 Periplasmic binding protein domain DKE43_12705 PF01613 Flavin reductase like domain DKE43_12710 PF03466 LysR substrate binding domain DKE43_12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_12715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKE43_12715 PF00205 Thiamine pyrophosphate enzyme, central domain DKE43_12715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKE43_12720 PF03306 Alpha-acetolactate decarboxylase DKE43_12725 PF13404 AsnC-type helix-turn-helix domain DKE43_12725 PF01037 Lrp/AsnC ligand binding domain DKE43_12730 PF02417 Chromate transporter DKE43_12735 PF02417 Chromate transporter DKE43_12740 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DKE43_12740 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DKE43_12740 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DKE43_12745 PF04434 SWIM zinc finger DKE43_12750 PF00271 Helicase conserved C-terminal domain DKE43_12750 PF00176 SNF2 family N-terminal domain DKE43_12750 PF12419 SNF2 Helicase protein DKE43_12755 PF13426 PAS domain DKE43_12755 PF01740 STAS domain DKE43_12770 PF14183 YwpF-like protein DKE43_12775 PF01741 Large-conductance mechanosensitive channel, MscL DKE43_12780 PF07977 FabA-like domain DKE43_12785 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_12790 PF00460 Flagella basal body rod protein DKE43_12790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DKE43_12795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DKE43_12795 PF00460 Flagella basal body rod protein DKE43_12805 PF12116 Stage III sporulation protein D DKE43_12810 PF01047 MarR family DKE43_12815 PF07690 Major Facilitator Superfamily DKE43_12820 PF01569 PAP2 superfamily DKE43_12825 PF07690 Major Facilitator Superfamily DKE43_12830 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_12835 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_12840 PF00005 ABC transporter DKE43_12850 PF00909 Ammonium Transporter Family DKE43_12855 PF00543 Nitrogen regulatory protein P-II DKE43_12860 PF01551 Peptidase family M23 DKE43_12865 PF00583 Acetyltransferase (GNAT) family DKE43_12880 PF00005 ABC transporter DKE43_12905 PF00471 Ribosomal protein L33 DKE43_12910 PF07683 Cobalamin synthesis protein cobW C-terminal domain DKE43_12910 PF02492 CobW/HypB/UreG, nucleotide-binding domain DKE43_12915 PF00253 Ribosomal protein S14p/S29e DKE43_12920 PF04055 Radical SAM superfamily DKE43_12920 PF06463 Molybdenum Cofactor Synthesis C DKE43_12925 PF02634 FdhD/NarQ family DKE43_12930 PF07690 Major Facilitator Superfamily DKE43_12935 PF00384 Molybdopterin oxidoreductase DKE43_12940 PF00092 von Willebrand factor type A domain DKE43_12945 PF00092 von Willebrand factor type A domain DKE43_12950 PF08486 Stage II sporulation protein DKE43_12955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DKE43_12960 PF08680 TATA-box binding DKE43_12965 PF06612 Protein of unknown function (DUF1146) DKE43_12975 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DKE43_12975 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DKE43_12980 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE43_12980 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE43_12985 PF00231 ATP synthase DKE43_12990 PF00306 ATP synthase alpha/beta chain, C terminal domain DKE43_12990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE43_12990 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKE43_12995 PF00213 ATP synthase delta (OSCP) subunit DKE43_13000 PF00430 ATP synthase B/B' CF(0) DKE43_13005 PF00137 ATP synthase subunit C DKE43_13010 PF00119 ATP synthase A chain DKE43_13015 PF03899 ATP synthase I chain DKE43_13025 PF00464 Serine hydroxymethyltransferase DKE43_13030 PF04260 Protein of unknown function (DUF436) DKE43_13035 PF02502 Ribose/Galactose Isomerase DKE43_13040 PF01451 Low molecular weight phosphotyrosine protein phosphatase DKE43_13045 PF02659 Putative manganese efflux pump DKE43_13050 PF03481 Putative GTP-binding controlling metal-binding DKE43_13050 PF01300 Telomere recombination DKE43_13060 PF09551 Stage II sporulation protein R (spore_II_R) DKE43_13070 PF17827 PrmC N-terminal domain DKE43_13070 PF05175 Methyltransferase small domain DKE43_13075 PF03462 PCRF domain DKE43_13075 PF00472 RF-1 domain DKE43_13080 PF13411 MerR HTH family regulatory protein DKE43_13085 PF03547 Membrane transport protein DKE43_13090 PF00390 Malic enzyme, N-terminal domain DKE43_13090 PF03949 Malic enzyme, NAD binding domain DKE43_13095 PF00265 Thymidine kinase DKE43_13100 PF01197 Ribosomal protein L31 DKE43_13105 PF07497 Rho termination factor, RNA-binding domain DKE43_13105 PF07498 Rho termination factor, N-terminal domain DKE43_13105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKE43_13110 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DKE43_13115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DKE43_13120 PF00923 Transaldolase/Fructose-6-phosphate aldolase DKE43_13125 PF01116 Fructose-bisphosphate aldolase class-II DKE43_13130 PF00072 Response regulator receiver domain DKE43_13135 PF10740 Domain of unknown function (DUF2529) DKE43_13140 PF06418 CTP synthase N-terminus DKE43_13140 PF00117 Glutamine amidotransferase class-I DKE43_13145 PF05066 HB1, ASXL, restriction endonuclease HTH domain DKE43_13155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE43_13155 PF02770 Acyl-CoA dehydrogenase, middle domain DKE43_13155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE43_13160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE43_13160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE43_13160 PF02770 Acyl-CoA dehydrogenase, middle domain DKE43_13165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DKE43_13165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DKE43_13170 PF02803 Thiolase, C-terminal domain DKE43_13170 PF00108 Thiolase, N-terminal domain DKE43_13175 PF13183 4Fe-4S dicluster domain DKE43_13175 PF02754 Cysteine-rich domain DKE43_13180 PF13091 PLD-like domain DKE43_13185 PF03851 UV-endonuclease UvdE DKE43_13195 PF02016 LD-carboxypeptidase N-terminal domain DKE43_13195 PF17676 LD-carboxypeptidase C-terminal domain DKE43_13200 PF00664 ABC transporter transmembrane region DKE43_13200 PF00005 ABC transporter DKE43_13205 PF13091 PLD-like domain DKE43_13205 PF13396 Phospholipase_D-nuclease N-terminal DKE43_13210 PF02016 LD-carboxypeptidase N-terminal domain DKE43_13210 PF17676 LD-carboxypeptidase C-terminal domain DKE43_13215 PF00750 tRNA synthetases class I (R) DKE43_13215 PF05746 DALR anticodon binding domain DKE43_13215 PF03485 Arginyl tRNA synthetase N terminal domain DKE43_13220 PF09148 Domain of unknown function (DUF1934) DKE43_13235 PF00491 Arginase family DKE43_13240 PF17284 Spermidine synthase tetramerisation domain DKE43_13245 PF00905 Penicillin binding protein transpeptidase domain DKE43_13245 PF00912 Transglycosylase DKE43_13250 PF08741 YwhD family DKE43_13255 PF02163 Peptidase family M50 DKE43_13260 PF01361 Tautomerase enzyme DKE43_13275 PF01966 HD domain DKE43_13280 PF07293 Protein of unknown function (DUF1450) DKE43_13295 PF03099 Biotin/lipoate A/B protein ligase family DKE43_13315 PF04740 LXG domain of WXG superfamily DKE43_13315 PF14449 Pre-toxin TG DKE43_13330 PF01515 Phosphate acetyl/butaryl transferase DKE43_13385 PF01381 Helix-turn-helix DKE43_13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_13395 PF00512 His Kinase A (phospho-acceptor) domain DKE43_13410 PF01037 Lrp/AsnC ligand binding domain DKE43_13415 PF07690 Major Facilitator Superfamily DKE43_13425 PF07883 Cupin domain DKE43_13440 PF00155 Aminotransferase class I and II DKE43_13450 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DKE43_13455 PF04321 RmlD substrate binding domain DKE43_13460 PF16363 GDP-mannose 4,6 dehydratase DKE43_13465 PF00483 Nucleotidyl transferase DKE43_13470 PF04101 Glycosyltransferase family 28 C-terminal domain DKE43_13475 PF02348 Cytidylyltransferase DKE43_13480 PF08666 SAF domain DKE43_13480 PF03102 NeuB family DKE43_13485 PF00583 Acetyltransferase (GNAT) family DKE43_13490 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DKE43_13495 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DKE43_13500 PF00535 Glycosyl transferase family 2 DKE43_13510 PF09671 Spore coat protein (Spore_GerQ) DKE43_13520 PF04241 Protein of unknown function (DUF423) DKE43_13525 PF00860 Permease family DKE43_13530 PF17261 Family of unknown function (DUF5327) DKE43_13535 PF00171 Aldehyde dehydrogenase family DKE43_13540 PF03167 Uracil DNA glycosylase superfamily DKE43_13545 PF00535 Glycosyl transferase family 2 DKE43_13555 PF08543 Phosphomethylpyrimidine kinase DKE43_13575 PF08244 Glycosyl hydrolases family 32 C terminal DKE43_13575 PF00251 Glycosyl hydrolases family 32 N-terminal domain DKE43_13580 PF02378 Phosphotransferase system, EIIC DKE43_13580 PF00367 phosphotransferase system, EIIB DKE43_13585 PF00874 PRD domain DKE43_13585 PF03123 CAT RNA binding domain DKE43_13595 PF13860 FlgD Ig-like domain DKE43_13595 PF02225 PA domain DKE43_13595 PF05922 Peptidase inhibitor I9 DKE43_13595 PF00082 Subtilase family DKE43_13605 PF00296 Luciferase-like monooxygenase DKE43_13610 PF00881 Nitroreductase family DKE43_13615 PF01098 Cell cycle protein DKE43_13620 PF17368 Spore morphogenesis and germination YwcE DKE43_13625 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DKE43_13630 PF00510 Cytochrome c oxidase subunit III DKE43_13635 PF00115 Cytochrome C and Quinol oxidase polypeptide I DKE43_13640 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DKE43_13640 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DKE43_13650 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DKE43_13650 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DKE43_13655 PF16363 GDP-mannose 4,6 dehydratase DKE43_13660 PF08544 GHMP kinases C terminal DKE43_13660 PF00288 GHMP kinases N terminal domain DKE43_13660 PF10509 Galactokinase galactose-binding signature DKE43_13675 PF04138 GtrA-like protein DKE43_13695 PF04341 Protein of unknown function, DUF485 DKE43_13700 PF00474 Sodium:solute symporter family DKE43_13715 PF02581 Thiamine monophosphate synthase DKE43_13720 PF02110 Hydroxyethylthiazole kinase family DKE43_13725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_13725 PF03466 LysR substrate binding domain DKE43_13730 PF03788 LrgA family DKE43_13735 PF04172 LrgB-like family DKE43_13740 PF17785 PUA-like domain DKE43_13740 PF10672 S-adenosylmethionine-dependent methyltransferase DKE43_13745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE43_13750 PF00005 ABC transporter DKE43_13755 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_13760 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_13770 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_13775 PF04607 Region found in RelA / SpoT proteins DKE43_13780 PF02653 Branched-chain amino acid transport system / permease component DKE43_13785 PF00005 ABC transporter DKE43_13790 PF13407 Periplasmic binding protein domain DKE43_13795 PF13229 Right handed beta helix region DKE43_13800 PF01063 Amino-transferase class IV DKE43_13815 PF11975 Family 4 glycosyl hydrolase C-terminal domain DKE43_13815 PF02056 Family 4 glycosyl hydrolase DKE43_13820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DKE43_13825 PF02378 Phosphotransferase system, EIIC DKE43_13830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_13835 PF08279 HTH domain DKE43_13835 PF05043 Mga helix-turn-helix domain DKE43_13835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_13835 PF00874 PRD domain DKE43_13850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DKE43_13850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DKE43_13865 PF04542 Sigma-70 region 2 DKE43_13865 PF08281 Sigma-70, region 4 DKE43_13870 PF00544 Pectate lyase DKE43_13875 PF00005 ABC transporter DKE43_13875 PF00664 ABC transporter transmembrane region DKE43_13880 PF00664 ABC transporter transmembrane region DKE43_13880 PF00005 ABC transporter DKE43_13885 PF02322 Cytochrome bd terminal oxidase subunit II DKE43_13890 PF01654 Cytochrome bd terminal oxidase subunit I DKE43_13895 PF00005 ABC transporter DKE43_13900 PF01032 FecCD transport family DKE43_13910 PF04203 Sortase domain DKE43_13915 PF00005 ABC transporter DKE43_13920 PF01032 FecCD transport family DKE43_13925 PF01497 Periplasmic binding protein DKE43_13935 PF05031 Iron Transport-associated domain DKE43_13940 PF05031 Iron Transport-associated domain DKE43_13945 PF01638 HxlR-like helix-turn-helix DKE43_13950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE43_13955 PF00925 GTP cyclohydrolase II DKE43_13955 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DKE43_13960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKE43_13960 PF01872 RibD C-terminal domain DKE43_13965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE43_13970 PF01522 Polysaccharide deacetylase DKE43_13975 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DKE43_13980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_13985 PF00232 Glycosyl hydrolase family 1 DKE43_13995 PF02378 Phosphotransferase system, EIIC DKE43_14000 PF08279 HTH domain DKE43_14000 PF05043 Mga helix-turn-helix domain DKE43_14000 PF00874 PRD domain DKE43_14000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_14025 PF03553 Na+/H+ antiporter family DKE43_14030 PF00206 Lyase DKE43_14030 PF10415 Fumarase C C-terminus DKE43_14035 PF00710 Asparaginase, N-terminal DKE43_14035 PF17763 Glutaminase/Asparaginase C-terminal domain DKE43_14040 PF01381 Helix-turn-helix DKE43_14050 PF17353 Family of unknown function (DUF5381) DKE43_14065 PF06013 Proteins of 100 residues with WXG DKE43_14070 PF07687 Peptidase dimerisation domain DKE43_14070 PF01546 Peptidase family M20/M25/M40 DKE43_14085 PF01717 Cobalamin-independent synthase, Catalytic domain DKE43_14090 PF00232 Glycosyl hydrolase family 1 DKE43_14095 PF02378 Phosphotransferase system, EIIC DKE43_14095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKE43_14095 PF00367 phosphotransferase system, EIIB DKE43_14100 PF00874 PRD domain DKE43_14100 PF03123 CAT RNA binding domain DKE43_14105 PF09234 Domain of unknown function (DUF1963) DKE43_14115 PF02361 Cobalt transport protein DKE43_14120 PF00005 ABC transporter DKE43_14125 PF09819 ABC-type cobalt transport system, permease component DKE43_14130 PF03070 TENA/THI-4/PQQC family DKE43_14160 PF05547 Immune inhibitor A peptidase M6 DKE43_14160 PF00801 PKD domain DKE43_14165 PF03992 Antibiotic biosynthesis monooxygenase DKE43_14170 PF00881 Nitroreductase family DKE43_14175 PF01047 MarR family DKE43_14180 PF02885 Glycosyl transferase family, helical bundle domain DKE43_14180 PF00591 Glycosyl transferase family, a/b domain DKE43_14180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DKE43_14185 PF01773 Na+ dependent nucleoside transporter N-terminus DKE43_14185 PF07662 Na+ dependent nucleoside transporter C-terminus DKE43_14190 PF01791 DeoC/LacD family aldolase DKE43_14195 PF04198 Putative sugar-binding domain DKE43_14205 PF01757 Acyltransferase family DKE43_14220 PF00072 Response regulator receiver domain DKE43_14220 PF00196 Bacterial regulatory proteins, luxR family DKE43_14230 PF13411 MerR HTH family regulatory protein DKE43_14235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DKE43_14235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DKE43_14240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_14245 PF00324 Amino acid permease DKE43_14250 PF08713 DNA alkylation repair enzyme DKE43_14255 PF02447 GntP family permease DKE43_14260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DKE43_14260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DKE43_14265 PF01418 Helix-turn-helix domain, rpiR family DKE43_14265 PF01380 SIS domain DKE43_14285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_14285 PF03466 LysR substrate binding domain DKE43_14290 PF00356 Bacterial regulatory proteins, lacI family DKE43_14295 PF13416 Bacterial extracellular solute-binding protein DKE43_14300 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_14305 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_14310 PF07745 Glycosyl hydrolase family 53 DKE43_14315 PF02449 Beta-galactosidase DKE43_14315 PF08532 Beta-galactosidase trimerisation domain DKE43_14315 PF08533 Beta-galactosidase C-terminal domain DKE43_14320 PF03600 Citrate transporter DKE43_14335 PF00005 ABC transporter DKE43_14340 PF08274 PhnA Zinc-Ribbon DKE43_14340 PF03831 PhnA domain DKE43_14345 PF02595 Glycerate kinase family DKE43_14350 PF02447 GntP family permease DKE43_14355 PF17853 GGDEF-like domain DKE43_14355 PF13556 PucR C-terminal helix-turn-helix domain DKE43_14355 PF05651 Putative sugar diacid recognition DKE43_14360 PF00440 Bacterial regulatory proteins, tetR family DKE43_14360 PF17922 Tetracyclin repressor-like, C-terminal domain DKE43_14365 PF07690 Major Facilitator Superfamily DKE43_14375 PF00005 ABC transporter DKE43_14385 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_14390 PF00874 PRD domain DKE43_14390 PF03123 CAT RNA binding domain DKE43_14395 PF00232 Glycosyl hydrolase family 1 DKE43_14400 PF02378 Phosphotransferase system, EIIC DKE43_14400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKE43_14400 PF00367 phosphotransferase system, EIIB DKE43_14420 PF00293 NUDIX domain DKE43_14435 PF00324 Amino acid permease DKE43_14445 PF07690 Major Facilitator Superfamily DKE43_14450 PF08501 Shikimate dehydrogenase substrate binding domain DKE43_14450 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DKE43_14455 PF07690 Major Facilitator Superfamily DKE43_14470 PF04740 LXG domain of WXG superfamily DKE43_14470 PF14449 Pre-toxin TG DKE43_14470 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues DKE43_14485 PF00232 Glycosyl hydrolase family 1 DKE43_14490 PF02378 Phosphotransferase system, EIIC DKE43_14490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKE43_14490 PF00367 phosphotransferase system, EIIB DKE43_14495 PF07702 UTRA domain DKE43_14495 PF00392 Bacterial regulatory proteins, gntR family DKE43_14520 PF00005 ABC transporter DKE43_14525 PF01381 Helix-turn-helix DKE43_14530 PF00753 Metallo-beta-lactamase superfamily DKE43_14530 PF16123 Hydroxyacylglutathione hydrolase C-terminus DKE43_14545 PF06958 S-type Pyocin DKE43_14545 PF03515 Colicin-like bacteriocin tRNase domain DKE43_14545 PF11429 Colicin D DKE43_14550 PF00082 Subtilase family DKE43_14550 PF05922 Peptidase inhibitor I9 DKE43_14560 PF02590 Predicted SPOUT methyltransferase DKE43_14565 PF14116 YyzF-like protein DKE43_14570 PF02361 Cobalt transport protein DKE43_14575 PF12558 ATP-binding cassette cobalt transporter DKE43_14575 PF00005 ABC transporter DKE43_14580 PF07155 ECF-type riboflavin transporter, S component DKE43_14595 PF00005 ABC transporter DKE43_14600 PF00583 Acetyltransferase (GNAT) family DKE43_14605 PF13180 PDZ domain DKE43_14610 PF00753 Metallo-beta-lactamase superfamily DKE43_14615 PF09648 YycH protein DKE43_14620 PF07435 YycH protein DKE43_14625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_14625 PF00672 HAMP domain DKE43_14625 PF13426 PAS domain DKE43_14625 PF00512 His Kinase A (phospho-acceptor) domain DKE43_14630 PF00486 Transcriptional regulatory protein, C terminal DKE43_14630 PF00072 Response regulator receiver domain DKE43_14655 PF00578 AhpC/TSA family DKE43_14665 PF04235 Protein of unknown function (DUF418) DKE43_14670 PF00709 Adenylosuccinate synthetase DKE43_14675 PF00440 Bacterial regulatory proteins, tetR family DKE43_14680 PF00067 Cytochrome P450 DKE43_14685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE43_14690 PF00772 DnaB-like helicase N terminal domain DKE43_14690 PF03796 DnaB-like helicase C terminal domain DKE43_14695 PF16226 Domain of unknown function (DUF4885) DKE43_14705 PF00756 Putative esterase DKE43_14710 PF00106 short chain dehydrogenase DKE43_14715 PF00425 chorismate binding enzyme DKE43_14720 PF13193 AMP-binding enzyme C-terminal domain DKE43_14720 PF00501 AMP-binding enzyme DKE43_14725 PF00857 Isochorismatase family DKE43_14725 PF00550 Phosphopantetheine attachment site DKE43_14730 PF00668 Condensation domain DKE43_14730 PF00975 Thioesterase domain DKE43_14730 PF00550 Phosphopantetheine attachment site DKE43_14730 PF13193 AMP-binding enzyme C-terminal domain DKE43_14730 PF00501 AMP-binding enzyme DKE43_14735 PF03621 MbtH-like protein DKE43_14740 PF01497 Periplasmic binding protein DKE43_14740 PF12833 Helix-turn-helix domain DKE43_14745 PF01497 Periplasmic binding protein DKE43_14750 PF00756 Putative esterase DKE43_14755 PF14174 YycC-like protein DKE43_14760 PF07690 Major Facilitator Superfamily DKE43_14765 PF03948 Ribosomal protein L9, C-terminal domain DKE43_14765 PF01281 Ribosomal protein L9, N-terminal domain DKE43_14770 PF01368 DHH family DKE43_14770 PF02272 DHHA1 domain DKE43_14775 PF09991 Predicted membrane protein (DUF2232) DKE43_14780 PF02833 DHHA2 domain DKE43_14780 PF01368 DHH family DKE43_14785 PF13739 Deacetylase PdaC DKE43_14785 PF11738 Protein of unknown function (DUF3298) DKE43_14790 PF08281 Sigma-70, region 4 DKE43_14790 PF04542 Sigma-70 region 2 DKE43_14800 PF06628 Catalase-related immune-responsive DKE43_14800 PF00199 Catalase DKE43_14805 PF03358 NADPH-dependent FMN reductase DKE43_14810 PF01738 Dienelactone hydrolase family DKE43_14815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE43_14820 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_14825 PF00571 CBS domain DKE43_14825 PF00005 ABC transporter DKE43_14830 PF01084 Ribosomal protein S18 DKE43_14835 PF00436 Single-strand binding protein family DKE43_14840 PF01250 Ribosomal protein S6 DKE43_14845 PF06071 Protein of unknown function (DUF933) DKE43_14845 PF01926 50S ribosome-binding GTPase DKE43_14850 PF06107 Bacterial protein of unknown function (DUF951) DKE43_14870 PF06866 Protein of unknown function (DUF1256) DKE43_14875 PF02195 ParB-like nuclease domain DKE43_14875 PF17762 HTH domain found in ParB protein DKE43_14880 PF13614 AAA domain DKE43_14890 PF17762 HTH domain found in ParB protein DKE43_14890 PF02195 ParB-like nuclease domain DKE43_14895 PF02527 rRNA small subunit methyltransferase G DKE43_14900 PF13932 GidA associated domain DKE43_14900 PF01134 Glucose inhibited division protein A DKE43_14905 PF01926 50S ribosome-binding GTPase DKE43_14905 PF10396 GTP-binding protein TrmE N-terminus DKE43_14905 PF12631 MnmE helical domain DKE43_14910 PF14804 Jag N-terminus DKE43_14910 PF01424 R3H domain DKE43_14915 PF02096 60Kd inner membrane protein DKE43_14920 PF00825 Ribonuclease P DKE43_14925 PF00468 Ribosomal protein L34 DKE43_14930 PF11638 DnaA N-terminal domain DKE43_14930 PF08299 Bacterial dnaA protein helix-turn-helix DKE43_14930 PF00308 Bacterial dnaA protein DKE43_14935 PF02768 DNA polymerase III beta subunit, C-terminal domain DKE43_14935 PF02767 DNA polymerase III beta subunit, central domain DKE43_14935 PF00712 DNA polymerase III beta subunit, N-terminal domain DKE43_14945 PF02463 RecF/RecN/SMC N terminal domain DKE43_14950 PF04025 Domain of unknown function (DUF370) DKE43_14955 PF00204 DNA gyrase B DKE43_14955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_14955 PF00986 DNA gyrase B subunit, carboxyl terminus DKE43_14955 PF01751 Toprim domain DKE43_14960 PF03989 DNA gyrase C-terminal domain, beta-propeller DKE43_14960 PF00521 DNA gyrase/topoisomerase IV, subunit A DKE43_14990 PF14175 YaaC-like Protein DKE43_14995 PF00571 CBS domain DKE43_14995 PF00478 IMP dehydrogenase / GMP reductase domain DKE43_15000 PF00768 D-alanyl-D-alanine carboxypeptidase DKE43_15000 PF07943 Penicillin-binding protein 5, C-terminal domain DKE43_15005 PF00392 Bacterial regulatory proteins, gntR family DKE43_15005 PF00155 Aminotransferase class I and II DKE43_15010 PF01680 SOR/SNZ family DKE43_15015 PF01174 SNO glutamine amidotransferase family DKE43_15020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKE43_15020 PF02403 Seryl-tRNA synthetase N-terminal domain DKE43_15025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_15035 PF01712 Deoxynucleoside kinase DKE43_15040 PF01712 Deoxynucleoside kinase DKE43_15045 PF01476 LysM domain DKE43_15045 PF00704 Glycosyl hydrolases family 18 DKE43_15050 PF00857 Isochorismatase family DKE43_15055 PF14437 MafB19-like deaminase DKE43_15065 PF12169 DNA polymerase III subunits gamma and tau domain III DKE43_15070 PF02575 YbaB/EbfC DNA-binding family DKE43_15075 PF02132 RecR protein DKE43_15075 PF13662 Toprim domain DKE43_15080 PF10704 Protein of unknown function (DUF2508) DKE43_15085 PF07441 SigmaK-factor processing regulatory protein BofA DKE43_15115 PF10764 Inhibitor of sigma-G Gin DKE43_15120 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein DKE43_15125 PF05816 Toxic anion resistance protein (TelA) DKE43_15130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DKE43_15130 PF01276 Orn/Lys/Arg decarboxylase, major domain DKE43_15135 PF02223 Thymidylate kinase DKE43_15140 PF06153 Cyclic-di-AMP receptor DKE43_15145 PF03885 Protein of unknown function (DUF327) DKE43_15150 PF09115 DNA polymerase III, delta subunit, C terminal DKE43_15155 PF04468 PSP1 C-terminal conserved region DKE43_15160 PF06156 Initiation control protein YabA DKE43_15165 PF05175 Methyltransferase small domain DKE43_15170 PF01541 GIY-YIG catalytic domain DKE43_15175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DKE43_15180 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DKE43_15180 PF18277 AbrB C-terminal domain DKE43_15185 PF01588 Putative tRNA binding domain DKE43_15185 PF08264 Anticodon-binding domain of tRNA DKE43_15185 PF09334 tRNA synthetases class I (M) DKE43_15190 PF01026 TatD related DNase DKE43_15195 PF03990 G5-linked-Ubiquitin-like domain DKE43_15195 PF06725 3D domain DKE43_15195 PF07501 G5 domain DKE43_15200 PF13662 Toprim domain DKE43_15200 PF13331 Domain of unknown function (DUF4093) DKE43_15205 PF00398 Ribosomal RNA adenine dimethylase DKE43_15210 PF05582 YabG peptidase U57 DKE43_15215 PF06257 Biofilm formation stimulator VEG DKE43_15220 PF00269 Small, acid-soluble spore proteins, alpha/beta type DKE43_15225 PF00288 GHMP kinases N terminal domain DKE43_15225 PF08544 GHMP kinases C terminal DKE43_15230 PF09182 Bacterial purine repressor, N-terminal DKE43_15230 PF00156 Phosphoribosyl transferase domain DKE43_15235 PF01042 Endoribonuclease L-PSP DKE43_15240 PF04026 SpoVG DKE43_15245 PF00483 Nucleotidyl transferase DKE43_15245 PF00132 Bacterial transferase hexapeptide (six repeats) DKE43_15250 PF14572 Phosphoribosyl synthetase-associated domain DKE43_15250 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKE43_15255 PF14693 Ribosomal protein TL5, C-terminal domain DKE43_15255 PF01386 Ribosomal L25p family DKE43_15260 PF01195 Peptidyl-tRNA hydrolase DKE43_15265 PF10955 Protein of unknown function (DUF2757) DKE43_15270 PF17757 UvrB interaction domain DKE43_15270 PF03461 TRCF domain DKE43_15270 PF00270 DEAD/DEAH box helicase DKE43_15270 PF00271 Helicase conserved C-terminal domain DKE43_15270 PF02559 CarD-like/TRCF domain DKE43_15275 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DKE43_15275 PF15714 Stage V sporulation protein T C-terminal, transcription factor DKE43_15280 PF14667 Polysaccharide biosynthesis C-terminal domain DKE43_15280 PF01943 Polysaccharide biosynthesis protein DKE43_15285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DKE43_15285 PF03819 MazG nucleotide pyrophosphohydrolase domain DKE43_15290 PF01479 S4 domain DKE43_15295 PF07873 YabP family DKE43_15300 PF09578 Spore cortex protein YabQ (Spore_YabQ) DKE43_15305 PF04977 Septum formation initiator DKE43_15310 PF00575 S1 RNA binding domain DKE43_15325 PF07228 Stage II sporulation protein E (SpoIIE) DKE43_15330 PF00092 von Willebrand factor type A domain DKE43_15335 PF00069 Protein kinase domain DKE43_15340 PF09179 TilS substrate binding domain DKE43_15340 PF01171 PP-loop family DKE43_15340 PF11734 TilS substrate C-terminal domain DKE43_15350 PF01434 Peptidase family M41 DKE43_15350 PF06480 FtsH Extracellular DKE43_15350 PF00004 ATPase family associated with various cellular activities (AAA) DKE43_15350 PF17862 AAA+ lid domain DKE43_15355 PF03309 Type III pantothenate kinase DKE43_15360 PF01430 Hsp33 protein DKE43_15365 PF13145 PPIC-type PPIASE domain DKE43_15370 PF00291 Pyridoxal-phosphate dependent enzyme DKE43_15375 PF00425 chorismate binding enzyme DKE43_15375 PF04715 Anthranilate synthase component I, N terminal region DKE43_15380 PF00117 Glutamine amidotransferase class-I DKE43_15385 PF01063 Amino-transferase class IV DKE43_15390 PF00809 Pterin binding enzyme DKE43_15395 PF02152 Dihydroneopterin aldolase DKE43_15400 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DKE43_15405 PF01381 Helix-turn-helix DKE43_15410 PF01207 Dihydrouridine synthase (Dus) DKE43_15415 PF01336 OB-fold nucleic acid binding domain DKE43_15415 PF00152 tRNA synthetases class II (D, K and N) DKE43_15495 PF17727 CtsR C-terminal dimerization domain DKE43_15495 PF05848 CtsR N-terminal HTH domain DKE43_15500 PF02151 UvrB/uvrC motif DKE43_15505 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DKE43_15510 PF00004 ATPase family associated with various cellular activities (AAA) DKE43_15510 PF02861 Clp amino terminal domain, pathogenicity island component DKE43_15510 PF10431 C-terminal, D2-small domain, of ClpB protein DKE43_15510 PF07724 AAA domain (Cdc48 subfamily) DKE43_15510 PF17871 AAA lid domain DKE43_15515 PF18073 Rubredoxin metal binding domain DKE43_15520 PF10635 DisA bacterial checkpoint controller linker region DKE43_15520 PF02457 DisA bacterial checkpoint controller nucleotide-binding DKE43_15530 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DKE43_15535 PF02542 YgbB family DKE43_15540 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKE43_15545 PF06426 Serine acetyltransferase, N-terminal DKE43_15545 PF00132 Bacterial transferase hexapeptide (six repeats) DKE43_15550 PF09190 DALR domain DKE43_15550 PF01406 tRNA synthetases class I (C) catalytic domain DKE43_15555 PF00636 Ribonuclease III domain DKE43_15560 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKE43_15560 PF00588 SpoU rRNA Methylase family DKE43_15565 PF05991 YacP-like NYN domain DKE43_15570 PF04542 Sigma-70 region 2 DKE43_15570 PF08281 Sigma-70, region 4 DKE43_15575 PF00471 Ribosomal protein L33 DKE43_15580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DKE43_15585 PF02357 Transcription termination factor nusG DKE43_15585 PF00467 KOW motif DKE43_15590 PF00298 Ribosomal protein L11, RNA binding domain DKE43_15590 PF03946 Ribosomal protein L11, N-terminal domain DKE43_15595 PF00687 Ribosomal protein L1p/L10e family DKE43_15600 PF00466 Ribosomal protein L10 DKE43_15605 PF16320 Ribosomal protein L7/L12 dimerisation domain DKE43_15605 PF00542 Ribosomal protein L7/L12 C-terminal domain DKE43_15610 PF05175 Methyltransferase small domain DKE43_15615 PF04565 RNA polymerase Rpb2, domain 3 DKE43_15615 PF10385 RNA polymerase beta subunit external 1 domain DKE43_15615 PF00562 RNA polymerase Rpb2, domain 6 DKE43_15615 PF04560 RNA polymerase Rpb2, domain 7 DKE43_15615 PF04561 RNA polymerase Rpb2, domain 2 DKE43_15615 PF04563 RNA polymerase beta subunit DKE43_15620 PF05000 RNA polymerase Rpb1, domain 4 DKE43_15620 PF04997 RNA polymerase Rpb1, domain 1 DKE43_15620 PF00623 RNA polymerase Rpb1, domain 2 DKE43_15620 PF04998 RNA polymerase Rpb1, domain 5 DKE43_15620 PF04983 RNA polymerase Rpb1, domain 3 DKE43_15625 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DKE43_15630 PF00164 Ribosomal protein S12/S23 DKE43_15635 PF00177 Ribosomal protein S7p/S5e DKE43_15640 PF00679 Elongation factor G C-terminus DKE43_15640 PF14492 Elongation Factor G, domain II DKE43_15640 PF03144 Elongation factor Tu domain 2 DKE43_15640 PF00009 Elongation factor Tu GTP binding domain DKE43_15640 PF03764 Elongation factor G, domain IV DKE43_15645 PF03143 Elongation factor Tu C-terminal domain DKE43_15645 PF03144 Elongation factor Tu domain 2 DKE43_15645 PF00009 Elongation factor Tu GTP binding domain DKE43_15650 PF12146 Serine aminopeptidase, S33 DKE43_15655 PF00338 Ribosomal protein S10p/S20e DKE43_15660 PF00297 Ribosomal protein L3 DKE43_15665 PF00573 Ribosomal protein L4/L1 family DKE43_15670 PF00276 Ribosomal protein L23 DKE43_15675 PF00181 Ribosomal Proteins L2, RNA binding domain DKE43_15675 PF03947 Ribosomal Proteins L2, C-terminal domain DKE43_15680 PF00203 Ribosomal protein S19 DKE43_15685 PF00237 Ribosomal protein L22p/L17e DKE43_15690 PF00189 Ribosomal protein S3, C-terminal domain DKE43_15690 PF07650 KH domain DKE43_15695 PF00252 Ribosomal protein L16p/L10e DKE43_15700 PF00831 Ribosomal L29 protein DKE43_15705 PF00366 Ribosomal protein S17 DKE43_15710 PF00238 Ribosomal protein L14p/L23e DKE43_15715 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DKE43_15715 PF00467 KOW motif DKE43_15720 PF00281 Ribosomal protein L5 DKE43_15720 PF00673 ribosomal L5P family C-terminus DKE43_15725 PF00253 Ribosomal protein S14p/S29e DKE43_15730 PF00410 Ribosomal protein S8 DKE43_15735 PF00347 Ribosomal protein L6 DKE43_15740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKE43_15745 PF00333 Ribosomal protein S5, N-terminal domain DKE43_15745 PF03719 Ribosomal protein S5, C-terminal domain DKE43_15750 PF00327 Ribosomal protein L30p/L7e DKE43_15755 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DKE43_15760 PF00344 SecY translocase DKE43_15765 PF05191 Adenylate kinase, active site lid DKE43_15770 PF00557 Metallopeptidase family M24 DKE43_15780 PF01176 Translation initiation factor 1A / IF-1 DKE43_15785 PF00444 Ribosomal protein L36 DKE43_15790 PF00416 Ribosomal protein S13/S18 DKE43_15795 PF00411 Ribosomal protein S11 DKE43_15800 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DKE43_15800 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DKE43_15800 PF01000 RNA polymerase Rpb3/RpoA insert domain DKE43_15805 PF01196 Ribosomal protein L17 DKE43_15810 PF00005 ABC transporter DKE43_15815 PF00005 ABC transporter DKE43_15820 PF02361 Cobalt transport protein DKE43_15825 PF01416 tRNA pseudouridine synthase DKE43_15830 PF00572 Ribosomal protein L13 DKE43_15835 PF00380 Ribosomal protein S9/S16 DKE43_15840 PF13302 Acetyltransferase (GNAT) domain DKE43_15865 PF10730 Protein of unknown function (DUF2521) DKE43_15870 PF01520 N-acetylmuramoyl-L-alanine amidase DKE43_15875 PF10609 NUBPL iron-transfer P-loop NTPase DKE43_15880 PF17898 Spore germination GerD central core domain DKE43_15885 PF14089 KinB-signalling pathway activation in sporulation DKE43_15890 PF01522 Polysaccharide deacetylase DKE43_15920 PF01740 STAS domain DKE43_15920 PF00916 Sulfate permease family DKE43_15925 PF01758 Sodium Bile acid symporter family DKE43_15930 PF07075 Protein of unknown function (DUF1343) DKE43_15935 PF00933 Glycosyl hydrolase family 3 N terminal domain DKE43_15935 PF01915 Glycosyl hydrolase family 3 C-terminal domain DKE43_15940 PF00144 Beta-lactamase DKE43_15945 PF02378 Phosphotransferase system, EIIC DKE43_15945 PF00367 phosphotransferase system, EIIB DKE43_15950 PF01418 Helix-turn-helix domain, rpiR family DKE43_15950 PF01380 SIS domain DKE43_15955 PF13580 SIS domain DKE43_15985 PF00491 Arginase family DKE43_15990 PF08281 Sigma-70, region 4 DKE43_15990 PF04542 Sigma-70 region 2 DKE43_15995 PF13490 Putative zinc-finger DKE43_16000 PF02457 DisA bacterial checkpoint controller nucleotide-binding DKE43_16005 PF07949 YbbR-like protein DKE43_16010 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKE43_16010 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKE43_16010 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKE43_16010 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKE43_16015 PF01380 SIS domain DKE43_16020 PF07693 KAP family P-loop domain DKE43_16035 PF01026 TatD related DNase DKE43_16050 PF13732 Domain of unknown function (DUF4162) DKE43_16050 PF00005 ABC transporter DKE43_16065 PF00005 ABC transporter DKE43_16085 PF04235 Protein of unknown function (DUF418) DKE43_16095 PF00005 ABC transporter DKE43_16110 PF00440 Bacterial regulatory proteins, tetR family DKE43_16110 PF17922 Tetracyclin repressor-like, C-terminal domain DKE43_16125 PF00324 Amino acid permease DKE43_16130 PF03009 Glycerophosphoryl diester phosphodiesterase family DKE43_16135 PF07690 Major Facilitator Superfamily DKE43_16145 PF03190 Protein of unknown function, DUF255 DKE43_16155 PF00005 ABC transporter DKE43_16185 PF02583 Metal-sensitive transcriptional repressor DKE43_16190 PF13686 DsrE/DsrF/DrsH-like family DKE43_16195 PF00581 Rhodanese-like domain DKE43_16200 PF01206 Sulfurtransferase TusA DKE43_16200 PF00581 Rhodanese-like domain DKE43_16205 PF00753 Metallo-beta-lactamase superfamily DKE43_16205 PF00581 Rhodanese-like domain DKE43_16210 PF01206 Sulfurtransferase TusA DKE43_16215 PF01925 Sulfite exporter TauE/SafE DKE43_16220 PF03129 Anticodon binding domain DKE43_16220 PF09180 Prolyl-tRNA synthetase, C-terminal DKE43_16220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKE43_16225 PF07690 Major Facilitator Superfamily DKE43_16230 PF01047 MarR family DKE43_16240 PF04463 Protein of unknown function (DUF523) DKE43_16250 PF00248 Aldo/keto reductase family DKE43_16255 PF00465 Iron-containing alcohol dehydrogenase DKE43_16265 PF13520 Amino acid permease DKE43_16275 PF03123 CAT RNA binding domain DKE43_16275 PF00874 PRD domain DKE43_16280 PF02378 Phosphotransferase system, EIIC DKE43_16280 PF00367 phosphotransferase system, EIIB DKE43_16280 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKE43_16285 PF00232 Glycosyl hydrolase family 1 DKE43_16300 PF08279 HTH domain DKE43_16300 PF05043 Mga helix-turn-helix domain DKE43_16300 PF00874 PRD domain DKE43_16300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_16305 PF00480 ROK family DKE43_16310 PF09261 Alpha mannosidase middle domain DKE43_16310 PF07748 Glycosyl hydrolases family 38 C-terminal domain DKE43_16310 PF01074 Glycosyl hydrolases family 38 N-terminal domain DKE43_16320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_16325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_16325 PF00381 PTS HPr component phosphorylation site DKE43_16330 PF00082 Subtilase family DKE43_16330 PF17936 Bacterial Ig domain DKE43_16345 PF00324 Amino acid permease DKE43_16350 PF02574 Homocysteine S-methyltransferase DKE43_16355 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKE43_16355 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKE43_16360 PF03551 Transcriptional regulator PadR-like family DKE43_16370 PF07690 Major Facilitator Superfamily DKE43_16390 PF00082 Subtilase family DKE43_16395 PF01425 Amidase DKE43_16400 PF00440 Bacterial regulatory proteins, tetR family DKE43_16405 PF07883 Cupin domain DKE43_16410 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_16410 PF00107 Zinc-binding dehydrogenase DKE43_16410 PF13823 Alcohol dehydrogenase GroES-associated DKE43_16415 PF01047 MarR family DKE43_16420 PF00501 AMP-binding enzyme DKE43_16420 PF13193 AMP-binding enzyme C-terminal domain DKE43_16425 PF13520 Amino acid permease DKE43_16440 PF00561 alpha/beta hydrolase fold DKE43_16445 PF01235 Sodium:alanine symporter family DKE43_16450 PF04960 Glutaminase DKE43_16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_16460 PF08664 YcbB domain DKE43_16460 PF00072 Response regulator receiver domain DKE43_16465 PF02810 SEC-C motif DKE43_16465 PF05225 helix-turn-helix, Psq domain DKE43_16470 PF17118 Domain of unknown function (DUF5105) DKE43_16470 PF11611 Domain of unknown function (DUF4352) DKE43_16475 PF00248 Aldo/keto reductase family DKE43_16480 PF14501 GHKL domain DKE43_16485 PF00072 Response regulator receiver domain DKE43_16485 PF04397 LytTr DNA-binding domain DKE43_16490 PF00005 ABC transporter DKE43_16495 PF12679 ABC-2 family transporter protein DKE43_16510 PF11611 Domain of unknown function (DUF4352) DKE43_16510 PF17118 Domain of unknown function (DUF5105) DKE43_16515 PF07486 Cell Wall Hydrolase DKE43_16530 PF00296 Luciferase-like monooxygenase DKE43_16535 PF02342 TerD domain DKE43_16540 PF02342 TerD domain DKE43_16545 PF02342 TerD domain DKE43_16550 PF03741 Integral membrane protein TerC family DKE43_16575 PF14266 Putative component of 'biosynthetic module' DKE43_16580 PF05816 Toxic anion resistance protein (TelA) DKE43_16585 PF00571 CBS domain DKE43_16585 PF00005 ABC transporter DKE43_16590 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_16595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DKE43_16610 PF01546 Peptidase family M20/M25/M40 DKE43_16610 PF07687 Peptidase dimerisation domain DKE43_16615 PF03606 C4-dicarboxylate anaerobic carrier DKE43_16620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKE43_16620 PF00056 lactate/malate dehydrogenase, NAD binding domain DKE43_16625 PF02652 L-lactate permease DKE43_16630 PF00356 Bacterial regulatory proteins, lacI family DKE43_16635 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DKE43_16640 PF05116 Sucrose-6F-phosphate phosphohydrolase DKE43_16645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DKE43_16645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DKE43_16650 PF07690 Major Facilitator Superfamily DKE43_16655 PF01810 LysE type translocator DKE43_16665 PF08892 YqcI/YcgG family DKE43_16670 PF00324 Amino acid permease DKE43_16675 PF09347 Domain of unknown function (DUF1989) DKE43_16680 PF02540 NAD synthase DKE43_16685 PF00701 Dihydrodipicolinate synthetase family DKE43_16690 PF00356 Bacterial regulatory proteins, lacI family DKE43_16695 PF07690 Major Facilitator Superfamily DKE43_16700 PF01202 Shikimate kinase DKE43_16705 PF08241 Methyltransferase domain DKE43_16710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_16710 PF03466 LysR substrate binding domain DKE43_16715 PF00795 Carbon-nitrogen hydrolase DKE43_16720 PF05448 Acetyl xylan esterase (AXE1) DKE43_16730 PF10127 RNA repair pathway DNA polymerase beta family DKE43_16735 PF01619 Proline dehydrogenase DKE43_16740 PF00171 Aldehyde dehydrogenase family DKE43_16745 PF17853 GGDEF-like domain DKE43_16745 PF13556 PucR C-terminal helix-turn-helix domain DKE43_16750 PF02040 Arsenical pump membrane protein DKE43_16755 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_16760 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_16765 PF10925 Protein of unknown function (DUF2680) DKE43_16770 PF12706 Beta-lactamase superfamily domain DKE43_16775 PF01037 Lrp/AsnC ligand binding domain DKE43_16780 PF02522 Aminoglycoside 3-N-acetyltransferase DKE43_16785 PF11033 Competence protein J (ComJ) DKE43_16790 PF17202 Single cache domain 3 DKE43_16790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_16790 PF00672 HAMP domain DKE43_16795 PF14040 Deoxyribonuclease NucA/NucB DKE43_16805 PF05378 Hydantoinase/oxoprolinase N-terminal region DKE43_16805 PF01968 Hydantoinase/oxoprolinase DKE43_16820 PF00005 ABC transporter DKE43_16820 PF08402 TOBE domain DKE43_16825 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_16830 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_16835 PF00550 Phosphopantetheine attachment site DKE43_16835 PF00501 AMP-binding enzyme DKE43_16835 PF13193 AMP-binding enzyme C-terminal domain DKE43_16835 PF00668 Condensation domain DKE43_16840 PF13193 AMP-binding enzyme C-terminal domain DKE43_16840 PF00501 AMP-binding enzyme DKE43_16840 PF00668 Condensation domain DKE43_16840 PF00550 Phosphopantetheine attachment site DKE43_16845 PF00550 Phosphopantetheine attachment site DKE43_16845 PF00668 Condensation domain DKE43_16845 PF13193 AMP-binding enzyme C-terminal domain DKE43_16845 PF00975 Thioesterase domain DKE43_16845 PF00501 AMP-binding enzyme DKE43_16850 PF00550 Phosphopantetheine attachment site DKE43_16850 PF00501 AMP-binding enzyme DKE43_16850 PF00668 Condensation domain DKE43_16850 PF13193 AMP-binding enzyme C-terminal domain DKE43_16855 PF13193 AMP-binding enzyme C-terminal domain DKE43_16855 PF00550 Phosphopantetheine attachment site DKE43_16855 PF00668 Condensation domain DKE43_16855 PF00501 AMP-binding enzyme DKE43_16860 PF00975 Thioesterase domain DKE43_16875 PF00005 ABC transporter DKE43_16890 PF00892 EamA-like transporter family DKE43_16895 PF00392 Bacterial regulatory proteins, gntR family DKE43_16895 PF00155 Aminotransferase class I and II DKE43_16900 PF01648 4'-phosphopantetheinyl transferase superfamily DKE43_16910 PF00005 ABC transporter DKE43_16915 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_16920 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_16925 PF00324 Amino acid permease DKE43_16930 PF00854 POT family DKE43_16935 PF12708 Pectate lyase superfamily protein DKE43_16935 PF13229 Right handed beta helix region DKE43_16950 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKE43_16955 PF00528 Binding-protein-dependent transport system inner membrane component DKE43_16960 PF00005 ABC transporter DKE43_16970 PF03972 MmgE/PrpD family DKE43_16975 PF01740 STAS domain DKE43_16975 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain DKE43_16980 PF00696 Amino acid kinase family DKE43_16980 PF13840 ACT domain DKE43_16985 PF07690 Major Facilitator Superfamily DKE43_16990 PF00440 Bacterial regulatory proteins, tetR family DKE43_17000 PF01022 Bacterial regulatory protein, arsR family DKE43_17005 PF00392 Bacterial regulatory proteins, gntR family DKE43_17005 PF00155 Aminotransferase class I and II DKE43_17010 PF00202 Aminotransferase class-III DKE43_17015 PF13520 Amino acid permease DKE43_17020 PF00171 Aldehyde dehydrogenase family DKE43_17025 PF02525 Flavodoxin-like fold DKE43_17030 PF07987 Domain of unkown function (DUF1775) DKE43_17035 PF04234 CopC domain DKE43_17035 PF05425 Copper resistance protein D DKE43_17035 PF13115 YtkA-like DKE43_17040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_17040 PF02378 Phosphotransferase system, EIIC DKE43_17045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_17050 PF08125 Mannitol dehydrogenase C-terminal domain DKE43_17050 PF01232 Mannitol dehydrogenase Rossmann domain DKE43_17055 PF02743 Cache domain DKE43_17055 PF00672 HAMP domain DKE43_17055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DKE43_17075 PF12681 Glyoxalase-like domain DKE43_17080 PF05901 Excalibur calcium-binding domain DKE43_17090 PF03746 LamB/YcsF family DKE43_17095 PF01566 Natural resistance-associated macrophage protein DKE43_17100 PF07286 Protein of unknown function (DUF1445) DKE43_17105 PF02682 Carboxyltransferase domain, subdomain C and D DKE43_17110 PF02626 Carboxyltransferase domain, subdomain A and B DKE43_17115 PF01614 Bacterial transcriptional regulator DKE43_17115 PF09339 IclR helix-turn-helix domain DKE43_17120 PF02525 Flavodoxin-like fold DKE43_17125 PF13472 GDSL-like Lipase/Acylhydrolase family DKE43_17135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKE43_17135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKE43_17135 PF00874 PRD domain DKE43_17135 PF05043 Mga helix-turn-helix domain DKE43_17135 PF08279 HTH domain DKE43_17140 PF13649 Methyltransferase domain DKE43_17150 PF16242 Pyridoxamine 5'-phosphate oxidase like DKE43_17170 PF12823 Domain of unknown function (DUF3817) DKE43_17175 PF00392 Bacterial regulatory proteins, gntR family DKE43_17175 PF07729 FCD domain DKE43_17180 PF12833 Helix-turn-helix domain DKE43_17180 PF02311 AraC-like ligand binding domain DKE43_17185 PF00892 EamA-like transporter family DKE43_17190 PF00180 Isocitrate/isopropylmalate dehydrogenase DKE43_17195 PF01131 DNA topoisomerase DKE43_17195 PF01751 Toprim domain DKE43_17205 PF00990 Diguanylate cyclase, GGDEF domain DKE43_17210 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DKE43_17220 PF03170 Bacterial cellulose synthase subunit DKE43_17225 PF13520 Amino acid permease DKE43_17230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKE43_17230 PF00205 Thiamine pyrophosphate enzyme, central domain DKE43_17230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKE43_17235 PF14449 Pre-toxin TG DKE43_17235 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues DKE43_17235 PF04740 LXG domain of WXG superfamily DKE43_17260 PF13302 Acetyltransferase (GNAT) domain DKE43_17265 PF01566 Natural resistance-associated macrophage protein DKE43_17270 PF04226 Transglycosylase associated protein DKE43_17275 PF12787 EcsC protein family DKE43_17280 PF03480 Bacterial extracellular solute-binding protein, family 7 DKE43_17285 PF17203 Single cache domain 3 DKE43_17285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKE43_17285 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DKE43_17290 PF08279 HTH domain DKE43_17290 PF00072 Response regulator receiver domain DKE43_17295 PF00375 Sodium:dicarboxylate symporter family DKE43_17300 PF01594 AI-2E family transporter DKE43_17305 PF00375 Sodium:dicarboxylate symporter family DKE43_17310 PF00005 ABC transporter DKE43_17325 PF13040 Fur-regulated basic protein B DKE43_17330 PF00085 Thioredoxin DKE43_17335 PF01820 D-ala D-ala ligase N-terminus DKE43_17335 PF07478 D-ala D-ala ligase C-terminus DKE43_17340 PF02875 Mur ligase family, glutamate ligase domain DKE43_17340 PF08245 Mur ligase middle domain DKE43_17340 PF01225 Mur ligase family, catalytic domain DKE43_17345 PF12146 Serine aminopeptidase, S33 DKE43_17355 PF00270 DEAD/DEAH box helicase DKE43_17355 PF00271 Helicase conserved C-terminal domain DKE43_17360 PF03703 Bacterial PH domain DKE43_17365 PF03703 Bacterial PH domain DKE43_17370 PF01694 Rhomboid family DKE43_17375 PF01648 4'-phosphopantetheinyl transferase superfamily DKE43_17385 PF00842 Alanine racemase, C-terminal domain DKE43_17385 PF01168 Alanine racemase, N-terminal domain DKE43_17390 PF01402 Ribbon-helix-helix protein, copG family DKE43_17395 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DKE43_17400 PF01740 STAS domain DKE43_17400 PF08678 Rsbr N terminal DKE43_17405 PF01740 STAS domain DKE43_17410 PF13581 Histidine kinase-like ATPase domain DKE43_17415 PF07228 Stage II sporulation protein E (SpoIIE) DKE43_17415 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain DKE43_17420 PF01740 STAS domain DKE43_17425 PF13581 Histidine kinase-like ATPase domain DKE43_17430 PF04542 Sigma-70 region 2 DKE43_17430 PF04539 Sigma-70 region 3 DKE43_17430 PF04545 Sigma-70, region 4 DKE43_17435 PF07228 Stage II sporulation protein E (SpoIIE) DKE43_17440 PF17674 HHH domain DKE43_17440 PF09371 Tex-like protein N-terminal domain DKE43_17440 PF16921 Tex protein YqgF-like domain DKE43_17440 PF00575 S1 RNA binding domain DKE43_17450 PF17283 SprT-like zinc ribbon domain DKE43_17450 PF10263 SprT-like family DKE43_17455 PF00676 Dehydrogenase E1 component DKE43_17460 PF02780 Transketolase, C-terminal domain DKE43_17460 PF02779 Transketolase, pyrimidine binding domain DKE43_17465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DKE43_17465 PF00364 Biotin-requiring enzyme DKE43_17465 PF02817 e3 binding domain DKE43_17470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DKE43_17470 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_17475 PF00158 Sigma-54 interaction domain DKE43_17475 PF02954 Bacterial regulatory protein, Fis family DKE43_17475 PF01590 GAF domain DKE43_17515 PF14659 Phage integrase, N-terminal SAM-like domain DKE43_17515 PF00589 Phage integrase family DKE43_17520 PF06114 IrrE N-terminal-like domain DKE43_17525 PF01381 Helix-turn-helix DKE43_17545 PF06125 Bacterial protein of unknown function (DUF961) DKE43_17555 PF18106 Rolling Circle replication initiation protein N-terminal domain DKE43_17555 PF02486 Replication initiation factor DKE43_17605 PF00437 Type II/IV secretion system protein DKE43_17630 PF12642 Conjugative transposon protein TcpC DKE43_17640 PF12648 TcpE family DKE43_17655 PF00877 NlpC/P60 family DKE43_17665 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_17675 PF00561 alpha/beta hydrolase fold DKE43_17685 PF00313 'Cold-shock' DNA-binding domain DKE43_17690 PF02559 CarD-like/TRCF domain DKE43_17695 PF08240 Alcohol dehydrogenase GroES-like domain DKE43_17695 PF00107 Zinc-binding dehydrogenase DKE43_17700 PF13411 MerR HTH family regulatory protein DKE43_17705 PF00722 Glycosyl hydrolases family 16 DKE43_17710 PF00440 Bacterial regulatory proteins, tetR family DKE43_17715 PF07690 Major Facilitator Superfamily DKE43_17730 PF00106 short chain dehydrogenase DKE43_17750 PF00710 Asparaginase, N-terminal DKE43_17750 PF17763 Glutaminase/Asparaginase C-terminal domain DKE43_17755 PF00561 alpha/beta hydrolase fold DKE43_17765 PF00440 Bacterial regulatory proteins, tetR family DKE43_17765 PF16925 Tetracyclin repressor-like, C-terminal domain DKE43_17770 PF07690 Major Facilitator Superfamily DKE43_17795 PF00583 Acetyltransferase (GNAT) family DKE43_17800 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DKE43_17805 PF01872 RibD C-terminal domain DKE43_17810 PF01047 MarR family DKE43_17815 PF00881 Nitroreductase family DKE43_17830 PF01381 Helix-turn-helix DKE43_17830 PF07883 Cupin domain DKE43_17835 PF01810 LysE type translocator DKE43_17840 PF00583 Acetyltransferase (GNAT) family DKE43_17845 PF03466 LysR substrate binding domain DKE43_17845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_17850 PF00248 Aldo/keto reductase family DKE43_17860 PF01596 O-methyltransferase DKE43_17870 PF03591 AzlC protein DKE43_17875 PF00892 EamA-like transporter family DKE43_17885 PF00375 Sodium:dicarboxylate symporter family DKE43_17925 PF00586 AIR synthase related protein, N-terminal domain DKE43_17925 PF02769 AIR synthase related protein, C-terminal domain DKE43_17930 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DKE43_17935 PF00814 Glycoprotease family DKE43_17940 PF00583 Acetyltransferase (GNAT) family DKE43_17945 PF00814 Glycoprotease family DKE43_17950 PF12848 ABC transporter DKE43_17950 PF00005 ABC transporter DKE43_17950 PF16326 ABC transporter C-terminal domain DKE43_17955 PF01967 MoaC family DKE43_17960 PF02629 CoA binding domain DKE43_17960 PF06971 Putative DNA-binding protein N-terminus DKE43_17965 PF02416 mttA/Hcf106 family DKE43_17970 PF00902 Sec-independent protein translocase protein (TatC) DKE43_17975 PF00293 NUDIX domain DKE43_17980 PF14146 Domain of unknown function (DUF4305) DKE43_17985 PF02517 CPBP intramembrane metalloprotease DKE43_17990 PF00166 Chaperonin 10 Kd subunit DKE43_17995 PF00118 TCP-1/cpn60 chaperonin family DKE43_18005 PF11553 Protein of unknown function (DUF3231) DKE43_18010 PF01047 MarR family DKE43_18015 PF00583 Acetyltransferase (GNAT) family DKE43_18020 PF04299 Putative FMN-binding domain DKE43_18040 PF03330 Lytic transglycolase DKE43_18045 PF07676 WD40-like Beta Propeller Repeat DKE43_18060 PF07731 Multicopper oxidase DKE43_18060 PF00394 Multicopper oxidase DKE43_18060 PF07732 Multicopper oxidase DKE43_18065 PF00324 Amino acid permease DKE43_18070 PF01545 Cation efflux family DKE43_18070 PF16916 Dimerisation domain of Zinc Transporter DKE43_18075 PF17863 AAA lid domain DKE43_18075 PF07726 ATPase family associated with various cellular activities (AAA) DKE43_18080 PF01882 Protein of unknown function DUF58 DKE43_18085 PF01841 Transglutaminase-like superfamily DKE43_18085 PF13559 Domain of unknown function (DUF4129) DKE43_18085 PF11992 Domain of unknown function (DUF3488) DKE43_18090 PF02540 NAD synthase DKE43_18090 PF00117 Glutamine amidotransferase class-I DKE43_18090 PF00958 GMP synthase C terminal domain DKE43_18095 PF04073 Aminoacyl-tRNA editing domain DKE43_18100 PF02311 AraC-like ligand binding domain DKE43_18100 PF12833 Helix-turn-helix domain DKE43_18105 PF00682 HMGL-like DKE43_18105 PF08502 LeuA allosteric (dimerisation) domain DKE43_18110 PF12833 Helix-turn-helix domain DKE43_18120 PF13302 Acetyltransferase (GNAT) domain DKE43_18135 PF07690 Major Facilitator Superfamily DKE43_18140 PF03466 LysR substrate binding domain DKE43_18140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_18145 PF00860 Permease family DKE43_18160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKE43_18165 PF14044 NETI protein DKE43_18170 PF00731 AIR carboxylase DKE43_18175 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DKE43_18175 PF02222 ATP-grasp domain DKE43_18180 PF00206 Lyase DKE43_18180 PF10397 Adenylosuccinate lyase C-terminus DKE43_18185 PF01259 SAICAR synthetase DKE43_18190 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DKE43_18200 PF00586 AIR synthase related protein, N-terminal domain DKE43_18200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DKE43_18200 PF02769 AIR synthase related protein, C-terminal domain DKE43_18205 PF00156 Phosphoribosyl transferase domain DKE43_18210 PF00586 AIR synthase related protein, N-terminal domain DKE43_18210 PF02769 AIR synthase related protein, C-terminal domain DKE43_18215 PF00551 Formyl transferase DKE43_18220 PF02142 MGS-like domain DKE43_18220 PF01808 AICARFT/IMPCHase bienzyme DKE43_18225 PF02843 Phosphoribosylglycinamide synthetase, C domain DKE43_18225 PF02844 Phosphoribosylglycinamide synthetase, N domain DKE43_18225 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DKE43_18245 PF00202 Aminotransferase class-III DKE43_18250 PF01144 Coenzyme A transferase DKE43_18255 PF01144 Coenzyme A transferase DKE43_18260 PF01546 Peptidase family M20/M25/M40 DKE43_18260 PF07687 Peptidase dimerisation domain DKE43_18265 PF11127 Protein of unknown function (DUF2892) DKE43_18270 PF13382 Adenine deaminase C-terminal domain DKE43_18270 PF01979 Amidohydrolase family DKE43_18275 PF01371 Trp repressor protein DKE43_18280 PF01645 Conserved region in glutamate synthase DKE43_18295 PF01884 PcrB family DKE43_18300 PF00580 UvrD/REP helicase N-terminal domain DKE43_18300 PF13361 UvrD-like helicase C-terminal domain DKE43_18305 PF00533 BRCA1 C Terminus (BRCT) domain DKE43_18305 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DKE43_18305 PF03120 NAD-dependent DNA ligase OB-fold domain DKE43_18305 PF12826 Helix-hairpin-helix motif DKE43_18305 PF01653 NAD-dependent DNA ligase adenylation domain DKE43_18310 PF07537 CamS sex pheromone cAM373 precursor DKE43_18320 PF00550 Phosphopantetheine attachment site DKE43_18320 PF00501 AMP-binding enzyme DKE43_18320 PF13193 AMP-binding enzyme C-terminal domain DKE43_18320 PF00668 Condensation domain DKE43_18325 PF00144 Beta-lactamase DKE43_18335 PF00975 Thioesterase domain DKE43_18340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DKE43_18340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DKE43_18355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DKE43_18355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DKE43_18355 PF02770 Acyl-CoA dehydrogenase, middle domain DKE43_18360 PF00550 Phosphopantetheine attachment site DKE43_18360 PF00501 AMP-binding enzyme DKE43_18360 PF13193 AMP-binding enzyme C-terminal domain DKE43_18360 PF00668 Condensation domain DKE43_18365 PF00501 AMP-binding enzyme DKE43_18365 PF00668 Condensation domain DKE43_18365 PF13193 AMP-binding enzyme C-terminal domain DKE43_18365 PF00550 Phosphopantetheine attachment site DKE43_18370 PF00698 Acyl transferase domain DKE43_18370 PF00668 Condensation domain DKE43_18370 PF16197 Ketoacyl-synthetase C-terminal extension DKE43_18370 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE43_18370 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE43_18370 PF00550 Phosphopantetheine attachment site DKE43_18375 PF00668 Condensation domain DKE43_18375 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE43_18375 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE43_18375 PF16197 Ketoacyl-synthetase C-terminal extension DKE43_18375 PF00698 Acyl transferase domain DKE43_18375 PF00550 Phosphopantetheine attachment site DKE43_18380 PF00668 Condensation domain DKE43_18380 PF02801 Beta-ketoacyl synthase, C-terminal domain DKE43_18380 PF00698 Acyl transferase domain DKE43_18380 PF00550 Phosphopantetheine attachment site DKE43_18380 PF00109 Beta-ketoacyl synthase, N-terminal domain DKE43_18380 PF16197 Ketoacyl-synthetase C-terminal extension DKE43_18385 PF01636 Phosphotransferase enzyme family DKE43_18390 PF00245 Alkaline phosphatase DKE43_18395 PF02308 MgtC family DKE43_18400 PF00474 Sodium:solute symporter family DKE43_18405 PF02686 Glu-tRNAGln amidotransferase C subunit DKE43_18410 PF01425 Amidase DKE43_18415 PF02637 GatB domain DKE43_18415 PF02934 GatB/GatE catalytic domain DKE43_18420 PF00440 Bacterial regulatory proteins, tetR family DKE43_18425 PF00873 AcrB/AcrD/AcrF family DKE43_18435 PF00781 Diacylglycerol kinase catalytic domain DKE43_18440 PF05958 tRNA (Uracil-5-)-methyltransferase DKE43_18440 PF01938 TRAM domain DKE43_18455 PF18801 response regulator aspartate phosphatase H, N terminal DKE43_18455 PF13176 Tetratricopeptide repeat DKE43_18460 PF01207 Dihydrouridine synthase (Dus) DKE43_18470 PF01418 Helix-turn-helix domain, rpiR family DKE43_18470 PF01380 SIS domain DKE43_18475 PF00367 phosphotransferase system, EIIB DKE43_18475 PF02378 Phosphotransferase system, EIIC DKE43_18480 PF11975 Family 4 glycosyl hydrolase C-terminal domain DKE43_18480 PF02056 Family 4 glycosyl hydrolase DKE43_18490 PF02082 Transcriptional regulator DKE43_18495 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKE43_18505 PF13021 Domain of unknown function (DUF3885) DKE43_18510 PF02056 Family 4 glycosyl hydrolase DKE43_18510 PF11975 Family 4 glycosyl hydrolase C-terminal domain DKE43_18515 PF01418 Helix-turn-helix domain, rpiR family DKE43_18515 PF01380 SIS domain DKE43_18520 PF07690 Major Facilitator Superfamily DKE43_18530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKE43_18530 PF03466 LysR substrate binding domain DKE43_18540 PF13037 Domain of unknown function (DUF3898) DKE43_18540 PF13039 Protein of unknown function (DUF3900) DKE43_18550 PF00483 Nucleotidyl transferase DKE43_18555 PF16363 GDP-mannose 4,6 dehydratase DKE43_18560 PF03407 Nucleotide-diphospho-sugar transferase DKE43_18565 PF00535 Glycosyl transferase family 2 DKE43_18570 PF03407 Nucleotide-diphospho-sugar transferase DKE43_18575 PF07690 Major Facilitator Superfamily DKE43_18580 PF03717 Penicillin-binding Protein dimerisation domain DKE43_18580 PF05223 NTF2-like N-terminal transpeptidase domain DKE43_18580 PF00905 Penicillin binding protein transpeptidase domain DKE43_18585 PF00939 Sodium:sulfate symporter transmembrane region DKE43_18590 PF13520 Amino acid permease DKE43_18595 PF00535 Glycosyl transferase family 2 DKE43_18595 PF13181 Tetratricopeptide repeat DKE43_18600 PF00005 ABC transporter DKE43_18600 PF16326 ABC transporter C-terminal domain DKE43_18600 PF12848 ABC transporter DKE43_18605 PF02649 Type I GTP cyclohydrolase folE2 DKE43_18610 PF13411 MerR HTH family regulatory protein DKE43_18615 PF07690 Major Facilitator Superfamily DKE43_18620 PF00005 ABC transporter DKE43_18620 PF12848 ABC transporter DKE43_18625 PF00270 DEAD/DEAH box helicase DKE43_18625 PF00271 Helicase conserved C-terminal domain DKE43_18630 PF00107 Zinc-binding dehydrogenase DKE43_18630 PF16884 N-terminal domain of oxidoreductase DKE43_18635 PF11486 Protein of unknown function (DUF3212) DKE43_18640 PF11181 Heat induced stress protein YflT DKE43_18650 PF00925 GTP cyclohydrolase II DKE43_18650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DKE43_18655 PF03781 Sulfatase-modifying factor enzyme 1 DKE43_18665 PF01872 RibD C-terminal domain DKE43_18665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region