locus-tag class description M5E03_00005 PF00308 Bacterial dnaA protein M5E03_00005 PF08299 Bacterial dnaA protein helix-turn-helix M5E03_00005 PF11638 DnaA N-terminal domain M5E03_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain M5E03_00010 PF02767 DNA polymerase III beta subunit, central domain M5E03_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain M5E03_00020 PF02463 RecF/RecN/SMC N terminal domain M5E03_00025 PF04025 Domain of unknown function (DUF370) M5E03_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_00030 PF01751 Toprim domain M5E03_00030 PF00204 DNA gyrase B M5E03_00030 PF00986 DNA gyrase B subunit, carboxyl terminus M5E03_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller M5E03_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A M5E03_00065 PF14175 YaaC-like Protein M5E03_00070 PF00571 CBS domain M5E03_00070 PF00478 IMP dehydrogenase / GMP reductase domain M5E03_00075 PF07943 Penicillin-binding protein 5, C-terminal domain M5E03_00075 PF00768 D-alanyl-D-alanine carboxypeptidase M5E03_00080 PF00155 Aminotransferase class I and II M5E03_00080 PF00392 Bacterial regulatory proteins, gntR family M5E03_00085 PF01680 SOR/SNZ family M5E03_00090 PF01174 SNO glutamine amidotransferase family M5E03_00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M5E03_00095 PF02403 Seryl-tRNA synthetase N-terminal domain M5E03_00110 PF01712 Deoxynucleoside kinase M5E03_00115 PF01712 Deoxynucleoside kinase M5E03_00120 PF00704 Glycosyl hydrolases family 18 M5E03_00120 PF01476 LysM domain M5E03_00125 PF00857 Isochorismatase family M5E03_00130 PF14437 MafB19-like deaminase M5E03_00140 PF12169 DNA polymerase III subunits gamma and tau domain III M5E03_00145 PF02575 YbaB/EbfC DNA-binding family M5E03_00150 PF02132 RecR protein M5E03_00150 PF13662 Toprim domain M5E03_00155 PF10704 Protein of unknown function (DUF2508) M5E03_00160 PF07441 SigmaK-factor processing regulatory protein BofA M5E03_00190 PF10764 Inhibitor of sigma-G Gin M5E03_00195 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein M5E03_00200 PF05816 Toxic anion resistance protein (TelA) M5E03_00205 PF01276 Orn/Lys/Arg decarboxylase, major domain M5E03_00205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M5E03_00210 PF02223 Thymidylate kinase M5E03_00215 PF06153 Cyclic-di-AMP receptor M5E03_00220 PF03885 Protein of unknown function (DUF327) M5E03_00225 PF09115 DNA polymerase III, delta subunit, C terminal M5E03_00230 PF04468 PSP1 C-terminal conserved region M5E03_00235 PF06156 Initiation control protein YabA M5E03_00240 PF05175 Methyltransferase small domain M5E03_00245 PF01541 GIY-YIG catalytic domain M5E03_00250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5E03_00255 PF18277 AbrB C-terminal domain M5E03_00255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M5E03_00260 PF08264 Anticodon-binding domain of tRNA M5E03_00260 PF09334 tRNA synthetases class I (M) M5E03_00260 PF01588 Putative tRNA binding domain M5E03_00265 PF01026 TatD related DNase M5E03_00280 PF13331 Domain of unknown function (DUF4093) M5E03_00280 PF13662 Toprim domain M5E03_00285 PF00398 Ribosomal RNA adenine dimethylase M5E03_00290 PF05582 YabG peptidase U57 M5E03_00295 PF06257 Biofilm formation stimulator VEG M5E03_00300 PF00269 Small, acid-soluble spore proteins, alpha/beta type M5E03_00305 PF08544 GHMP kinases C terminal M5E03_00305 PF00288 GHMP kinases N terminal domain M5E03_00310 PF00156 Phosphoribosyl transferase domain M5E03_00310 PF09182 Bacterial purine repressor, N-terminal M5E03_00315 PF01042 Endoribonuclease L-PSP M5E03_00320 PF04026 SpoVG M5E03_00325 PF00483 Nucleotidyl transferase M5E03_00325 PF00132 Bacterial transferase hexapeptide (six repeats) M5E03_00330 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M5E03_00330 PF14572 Phosphoribosyl synthetase-associated domain M5E03_00335 PF01386 Ribosomal L25p family M5E03_00335 PF14693 Ribosomal protein TL5, C-terminal domain M5E03_00340 PF01195 Peptidyl-tRNA hydrolase M5E03_00345 PF10955 Protein of unknown function (DUF2757) M5E03_00350 PF17757 UvrB interaction domain M5E03_00350 PF02559 CarD-like/TRCF domain M5E03_00350 PF00270 DEAD/DEAH box helicase M5E03_00350 PF00271 Helicase conserved C-terminal domain M5E03_00350 PF03461 TRCF domain M5E03_00355 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M5E03_00355 PF15714 Stage V sporulation protein T C-terminal, transcription factor M5E03_00360 PF01943 Polysaccharide biosynthesis protein M5E03_00360 PF14667 Polysaccharide biosynthesis C-terminal domain M5E03_00365 PF03819 MazG nucleotide pyrophosphohydrolase domain M5E03_00365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5E03_00370 PF01479 S4 domain M5E03_00375 PF07873 YabP family M5E03_00380 PF09578 Spore cortex protein YabQ (Spore_YabQ) M5E03_00385 PF04977 Septum formation initiator M5E03_00390 PF00575 S1 RNA binding domain M5E03_00405 PF07228 Stage II sporulation protein E (SpoIIE) M5E03_00410 PF00092 von Willebrand factor type A domain M5E03_00415 PF00069 Protein kinase domain M5E03_00420 PF09179 TilS substrate binding domain M5E03_00420 PF01171 PP-loop family M5E03_00420 PF11734 TilS substrate C-terminal domain M5E03_00425 PF00156 Phosphoribosyl transferase domain M5E03_00430 PF00004 ATPase family associated with various cellular activities (AAA) M5E03_00430 PF17862 AAA+ lid domain M5E03_00430 PF06480 FtsH Extracellular M5E03_00430 PF01434 Peptidase family M41 M5E03_00435 PF03309 Type III pantothenate kinase M5E03_00440 PF01430 Hsp33 protein M5E03_00445 PF13145 PPIC-type PPIASE domain M5E03_00450 PF00291 Pyridoxal-phosphate dependent enzyme M5E03_00455 PF04715 Anthranilate synthase component I, N terminal region M5E03_00455 PF00425 chorismate binding enzyme M5E03_00460 PF00117 Glutamine amidotransferase class-I M5E03_00465 PF01063 Amino-transferase class IV M5E03_00470 PF00809 Pterin binding enzyme M5E03_00475 PF02152 Dihydroneopterin aldolase M5E03_00480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M5E03_00485 PF01381 Helix-turn-helix M5E03_00490 PF01207 Dihydrouridine synthase (Dus) M5E03_00495 PF01336 OB-fold nucleic acid binding domain M5E03_00495 PF00152 tRNA synthetases class II (D, K and N) M5E03_00575 PF17727 CtsR C-terminal dimerization domain M5E03_00575 PF05848 CtsR N-terminal HTH domain M5E03_00580 PF02151 UvrB/uvrC motif M5E03_00585 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain M5E03_00590 PF02861 Clp amino terminal domain, pathogenicity island component M5E03_00590 PF10431 C-terminal, D2-small domain, of ClpB protein M5E03_00590 PF17871 AAA lid domain M5E03_00590 PF00004 ATPase family associated with various cellular activities (AAA) M5E03_00590 PF07724 AAA domain (Cdc48 subfamily) M5E03_00595 PF18073 Rubredoxin metal binding domain M5E03_00600 PF02457 DisA bacterial checkpoint controller nucleotide-binding M5E03_00600 PF10635 DisA bacterial checkpoint controller linker region M5E03_00610 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M5E03_00615 PF02542 YgbB family M5E03_00620 PF00749 tRNA synthetases class I (E and Q), catalytic domain M5E03_00625 PF06426 Serine acetyltransferase, N-terminal M5E03_00625 PF00132 Bacterial transferase hexapeptide (six repeats) M5E03_00630 PF09190 DALR domain M5E03_00630 PF01406 tRNA synthetases class I (C) catalytic domain M5E03_00635 PF00636 Ribonuclease III domain M5E03_00640 PF00588 SpoU rRNA Methylase family M5E03_00640 PF08032 RNA 2'-O ribose methyltransferase substrate binding M5E03_00645 PF05991 YacP-like NYN domain M5E03_00650 PF08281 Sigma-70, region 4 M5E03_00650 PF04542 Sigma-70 region 2 M5E03_00655 PF00471 Ribosomal protein L33 M5E03_00660 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M5E03_00665 PF02357 Transcription termination factor nusG M5E03_00665 PF00467 KOW motif M5E03_00670 PF00298 Ribosomal protein L11, RNA binding domain M5E03_00670 PF03946 Ribosomal protein L11, N-terminal domain M5E03_00675 PF00687 Ribosomal protein L1p/L10e family M5E03_00680 PF00466 Ribosomal protein L10 M5E03_00685 PF16320 Ribosomal protein L7/L12 dimerisation domain M5E03_00685 PF00542 Ribosomal protein L7/L12 C-terminal domain M5E03_00690 PF05175 Methyltransferase small domain M5E03_00695 PF04560 RNA polymerase Rpb2, domain 7 M5E03_00695 PF00562 RNA polymerase Rpb2, domain 6 M5E03_00695 PF10385 RNA polymerase beta subunit external 1 domain M5E03_00695 PF04561 RNA polymerase Rpb2, domain 2 M5E03_00695 PF04565 RNA polymerase Rpb2, domain 3 M5E03_00695 PF04563 RNA polymerase beta subunit M5E03_00700 PF04983 RNA polymerase Rpb1, domain 3 M5E03_00700 PF04997 RNA polymerase Rpb1, domain 1 M5E03_00700 PF05000 RNA polymerase Rpb1, domain 4 M5E03_00700 PF04998 RNA polymerase Rpb1, domain 5 M5E03_00700 PF00623 RNA polymerase Rpb1, domain 2 M5E03_00705 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M5E03_00710 PF00164 Ribosomal protein S12/S23 M5E03_00715 PF00177 Ribosomal protein S7p/S5e M5E03_00720 PF00009 Elongation factor Tu GTP binding domain M5E03_00720 PF03144 Elongation factor Tu domain 2 M5E03_00720 PF03764 Elongation factor G, domain IV M5E03_00720 PF14492 Elongation Factor G, domain II M5E03_00720 PF00679 Elongation factor G C-terminus M5E03_00725 PF00009 Elongation factor Tu GTP binding domain M5E03_00725 PF03144 Elongation factor Tu domain 2 M5E03_00725 PF03143 Elongation factor Tu C-terminal domain M5E03_00730 PF12146 Serine aminopeptidase, S33 M5E03_00735 PF00338 Ribosomal protein S10p/S20e M5E03_00740 PF00297 Ribosomal protein L3 M5E03_00745 PF00573 Ribosomal protein L4/L1 family M5E03_00750 PF00276 Ribosomal protein L23 M5E03_00755 PF00181 Ribosomal Proteins L2, RNA binding domain M5E03_00755 PF03947 Ribosomal Proteins L2, C-terminal domain M5E03_00760 PF00203 Ribosomal protein S19 M5E03_00765 PF00237 Ribosomal protein L22p/L17e M5E03_00770 PF07650 KH domain M5E03_00770 PF00189 Ribosomal protein S3, C-terminal domain M5E03_00775 PF00252 Ribosomal protein L16p/L10e M5E03_00780 PF00831 Ribosomal L29 protein M5E03_00785 PF00366 Ribosomal protein S17 M5E03_00790 PF00238 Ribosomal protein L14p/L23e M5E03_00795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M5E03_00795 PF00467 KOW motif M5E03_00800 PF00281 Ribosomal protein L5 M5E03_00800 PF00673 ribosomal L5P family C-terminus M5E03_00805 PF00253 Ribosomal protein S14p/S29e M5E03_00810 PF00410 Ribosomal protein S8 M5E03_00815 PF00347 Ribosomal protein L6 M5E03_00820 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M5E03_00825 PF03719 Ribosomal protein S5, C-terminal domain M5E03_00825 PF00333 Ribosomal protein S5, N-terminal domain M5E03_00830 PF00327 Ribosomal protein L30p/L7e M5E03_00835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M5E03_00840 PF00344 SecY translocase M5E03_00845 PF05191 Adenylate kinase, active site lid M5E03_00850 PF00557 Metallopeptidase family M24 M5E03_00860 PF01176 Translation initiation factor 1A / IF-1 M5E03_00865 PF00444 Ribosomal protein L36 M5E03_00870 PF00416 Ribosomal protein S13/S18 M5E03_00875 PF00411 Ribosomal protein S11 M5E03_00880 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M5E03_00880 PF01000 RNA polymerase Rpb3/RpoA insert domain M5E03_00880 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M5E03_00885 PF01196 Ribosomal protein L17 M5E03_00890 PF00005 ABC transporter M5E03_00895 PF00005 ABC transporter M5E03_00900 PF02361 Cobalt transport protein M5E03_00905 PF01416 tRNA pseudouridine synthase M5E03_00910 PF00572 Ribosomal protein L13 M5E03_00915 PF00380 Ribosomal protein S9/S16 M5E03_00920 PF00589 Phage integrase family M5E03_00960 PF01555 DNA methylase M5E03_00965 PF04851 Type III restriction enzyme, res subunit M5E03_00975 PF13302 Acetyltransferase (GNAT) domain M5E03_00995 PF10730 Protein of unknown function (DUF2521) M5E03_01000 PF01520 N-acetylmuramoyl-L-alanine amidase M5E03_01005 PF10609 NUBPL iron-transfer P-loop NTPase M5E03_01010 PF17898 Spore germination GerD central core domain M5E03_01015 PF14089 KinB-signalling pathway activation in sporulation M5E03_01020 PF01522 Polysaccharide deacetylase M5E03_01050 PF00916 Sulfate permease family M5E03_01050 PF01740 STAS domain M5E03_01055 PF01758 Sodium Bile acid symporter family M5E03_01060 PF07075 Protein of unknown function (DUF1343) M5E03_01065 PF00933 Glycosyl hydrolase family 3 N terminal domain M5E03_01065 PF01915 Glycosyl hydrolase family 3 C-terminal domain M5E03_01070 PF00144 Beta-lactamase M5E03_01075 PF00367 phosphotransferase system, EIIB M5E03_01075 PF02378 Phosphotransferase system, EIIC M5E03_01080 PF01380 SIS domain M5E03_01080 PF01418 Helix-turn-helix domain, rpiR family M5E03_01085 PF13580 SIS domain M5E03_01115 PF00491 Arginase family M5E03_01120 PF04542 Sigma-70 region 2 M5E03_01120 PF08281 Sigma-70, region 4 M5E03_01125 PF13490 Putative zinc-finger M5E03_01130 PF02457 DisA bacterial checkpoint controller nucleotide-binding M5E03_01135 PF07949 YbbR-like protein M5E03_01140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M5E03_01140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M5E03_01140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M5E03_01140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M5E03_01145 PF01380 SIS domain M5E03_01165 PF00005 ABC transporter M5E03_01165 PF13732 Domain of unknown function (DUF4162) M5E03_01180 PF00005 ABC transporter M5E03_01195 PF00005 ABC transporter M5E03_01220 PF04235 Protein of unknown function (DUF418) M5E03_01230 PF00005 ABC transporter M5E03_01240 PF00324 Amino acid permease M5E03_01245 PF03009 Glycerophosphoryl diester phosphodiesterase family M5E03_01250 PF07690 Major Facilitator Superfamily M5E03_01260 PF03190 Protein of unknown function, DUF255 M5E03_01285 PF00109 Beta-ketoacyl synthase, N-terminal domain M5E03_01285 PF02801 Beta-ketoacyl synthase, C-terminal domain M5E03_01295 PF03190 Protein of unknown function, DUF255 M5E03_01310 PF02583 Metal-sensitive transcriptional repressor M5E03_01315 PF13686 DsrE/DsrF/DrsH-like family M5E03_01325 PF00581 Rhodanese-like domain M5E03_01325 PF01206 Sulfurtransferase TusA M5E03_01330 PF00753 Metallo-beta-lactamase superfamily M5E03_01330 PF00581 Rhodanese-like domain M5E03_01335 PF01206 Sulfurtransferase TusA M5E03_01340 PF01925 Sulfite exporter TauE/SafE M5E03_01350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M5E03_01350 PF03129 Anticodon binding domain M5E03_01350 PF09180 Prolyl-tRNA synthetase, C-terminal M5E03_01355 PF07690 Major Facilitator Superfamily M5E03_01365 PF01047 MarR family M5E03_01375 PF04463 Protein of unknown function (DUF523) M5E03_01385 PF00248 Aldo/keto reductase family M5E03_01390 PF00465 Iron-containing alcohol dehydrogenase M5E03_01395 PF12368 Rhodanase C-terminal M5E03_01395 PF00581 Rhodanese-like domain M5E03_01395 PF17773 UPF0176 acylphosphatase like domain M5E03_01400 PF13520 Amino acid permease M5E03_01410 PF03123 CAT RNA binding domain M5E03_01410 PF00874 PRD domain M5E03_01415 PF02378 Phosphotransferase system, EIIC M5E03_01415 PF00367 phosphotransferase system, EIIB M5E03_01415 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5E03_01420 PF00232 Glycosyl hydrolase family 1 M5E03_01440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_01440 PF00874 PRD domain M5E03_01440 PF05043 Mga helix-turn-helix domain M5E03_01440 PF08279 HTH domain M5E03_01445 PF00480 ROK family M5E03_01450 PF01074 Glycosyl hydrolases family 38 N-terminal domain M5E03_01450 PF09261 Alpha mannosidase middle domain M5E03_01450 PF07748 Glycosyl hydrolases family 38 C-terminal domain M5E03_01460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_01465 PF00381 PTS HPr component phosphorylation site M5E03_01465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_01470 PF17936 Bacterial Ig domain M5E03_01470 PF00082 Subtilase family M5E03_01485 PF00324 Amino acid permease M5E03_01490 PF02574 Homocysteine S-methyltransferase M5E03_01495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M5E03_01495 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M5E03_01500 PF03551 Transcriptional regulator PadR-like family M5E03_01515 PF07690 Major Facilitator Superfamily M5E03_01520 PF00583 Acetyltransferase (GNAT) family M5E03_01535 PF00082 Subtilase family M5E03_01540 PF01425 Amidase M5E03_01545 PF00440 Bacterial regulatory proteins, tetR family M5E03_01550 PF07883 Cupin domain M5E03_01555 PF08240 Alcohol dehydrogenase GroES-like domain M5E03_01555 PF00107 Zinc-binding dehydrogenase M5E03_01555 PF13823 Alcohol dehydrogenase GroES-associated M5E03_01560 PF01047 MarR family M5E03_01565 PF00501 AMP-binding enzyme M5E03_01565 PF13193 AMP-binding enzyme C-terminal domain M5E03_01570 PF13520 Amino acid permease M5E03_01580 PF00561 alpha/beta hydrolase fold M5E03_01585 PF01235 Sodium:alanine symporter family M5E03_01590 PF04960 Glutaminase M5E03_01595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_01600 PF00072 Response regulator receiver domain M5E03_01600 PF08664 YcbB domain M5E03_01605 PF05225 helix-turn-helix, Psq domain M5E03_01605 PF02810 SEC-C motif M5E03_01610 PF11611 Domain of unknown function (DUF4352) M5E03_01610 PF17118 Domain of unknown function (DUF5105) M5E03_01615 PF00196 Bacterial regulatory proteins, luxR family M5E03_01615 PF00072 Response regulator receiver domain M5E03_01620 PF07730 Histidine kinase M5E03_01630 PF00248 Aldo/keto reductase family M5E03_01635 PF14501 GHKL domain M5E03_01640 PF00072 Response regulator receiver domain M5E03_01640 PF04397 LytTr DNA-binding domain M5E03_01645 PF00005 ABC transporter M5E03_01650 PF12679 ABC-2 family transporter protein M5E03_01655 PF11611 Domain of unknown function (DUF4352) M5E03_01655 PF17118 Domain of unknown function (DUF5105) M5E03_01660 PF07486 Cell Wall Hydrolase M5E03_01675 PF00296 Luciferase-like monooxygenase M5E03_01680 PF02342 TerD domain M5E03_01685 PF02342 TerD domain M5E03_01690 PF02342 TerD domain M5E03_01695 PF03741 Integral membrane protein TerC family M5E03_01720 PF14266 Putative component of 'biosynthetic module' M5E03_01725 PF05816 Toxic anion resistance protein (TelA) M5E03_01730 PF00005 ABC transporter M5E03_01730 PF00571 CBS domain M5E03_01735 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_01740 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M5E03_01745 PF00561 alpha/beta hydrolase fold M5E03_01755 PF07687 Peptidase dimerisation domain M5E03_01755 PF01546 Peptidase family M20/M25/M40 M5E03_01760 PF03606 C4-dicarboxylate anaerobic carrier M5E03_01765 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M5E03_01765 PF00056 lactate/malate dehydrogenase, NAD binding domain M5E03_01770 PF02652 L-lactate permease M5E03_01775 PF00356 Bacterial regulatory proteins, lacI family M5E03_01780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M5E03_01785 PF05116 Sucrose-6F-phosphate phosphohydrolase M5E03_01790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M5E03_01790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M5E03_01795 PF07690 Major Facilitator Superfamily M5E03_01800 PF01810 LysE type translocator M5E03_01810 PF08892 YqcI/YcgG family M5E03_01815 PF00324 Amino acid permease M5E03_01820 PF09347 Domain of unknown function (DUF1989) M5E03_01825 PF02540 NAD synthase M5E03_01835 PF00171 Aldehyde dehydrogenase family M5E03_01840 PF01487 Type I 3-dehydroquinase M5E03_01845 PF00205 Thiamine pyrophosphate enzyme, central domain M5E03_01845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5E03_01845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5E03_01855 PF02515 CoA-transferase family III M5E03_01870 PF09339 IclR helix-turn-helix domain M5E03_01870 PF01614 Bacterial transcriptional regulator M5E03_01875 PF01202 Shikimate kinase M5E03_01880 PF00701 Dihydrodipicolinate synthetase family M5E03_01885 PF00356 Bacterial regulatory proteins, lacI family M5E03_01890 PF07690 Major Facilitator Superfamily M5E03_01895 PF08241 Methyltransferase domain M5E03_01900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_01900 PF03466 LysR substrate binding domain M5E03_01905 PF00795 Carbon-nitrogen hydrolase M5E03_01910 PF05448 Acetyl xylan esterase (AXE1) M5E03_01920 PF10127 RNA repair pathway DNA polymerase beta family M5E03_01925 PF01619 Proline dehydrogenase M5E03_01930 PF00171 Aldehyde dehydrogenase family M5E03_01935 PF13556 PucR C-terminal helix-turn-helix domain M5E03_01935 PF17853 GGDEF-like domain M5E03_01940 PF02040 Arsenical pump membrane protein M5E03_01945 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_01950 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_01955 PF10925 Protein of unknown function (DUF2680) M5E03_01960 PF12706 Beta-lactamase superfamily domain M5E03_01965 PF01037 Lrp/AsnC ligand binding domain M5E03_01970 PF02522 Aminoglycoside 3-N-acetyltransferase M5E03_01975 PF11033 Competence protein J (ComJ) M5E03_01980 PF17202 Single cache domain 3 M5E03_01980 PF00672 HAMP domain M5E03_01980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_01985 PF14040 Deoxyribonuclease NucA/NucB M5E03_01990 PF01968 Hydantoinase/oxoprolinase M5E03_01990 PF05378 Hydantoinase/oxoprolinase N-terminal region M5E03_02005 PF00005 ABC transporter M5E03_02005 PF08402 TOBE domain M5E03_02010 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_02015 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_02020 PF00550 Phosphopantetheine attachment site M5E03_02020 PF00668 Condensation domain M5E03_02020 PF00501 AMP-binding enzyme M5E03_02020 PF13193 AMP-binding enzyme C-terminal domain M5E03_02025 PF13193 AMP-binding enzyme C-terminal domain M5E03_02025 PF00668 Condensation domain M5E03_02025 PF00550 Phosphopantetheine attachment site M5E03_02025 PF00501 AMP-binding enzyme M5E03_02030 PF00550 Phosphopantetheine attachment site M5E03_02030 PF00975 Thioesterase domain M5E03_02030 PF00668 Condensation domain M5E03_02030 PF00501 AMP-binding enzyme M5E03_02030 PF13193 AMP-binding enzyme C-terminal domain M5E03_02035 PF00501 AMP-binding enzyme M5E03_02035 PF13193 AMP-binding enzyme C-terminal domain M5E03_02035 PF00550 Phosphopantetheine attachment site M5E03_02035 PF00668 Condensation domain M5E03_02040 PF13193 AMP-binding enzyme C-terminal domain M5E03_02040 PF00668 Condensation domain M5E03_02040 PF00501 AMP-binding enzyme M5E03_02040 PF00550 Phosphopantetheine attachment site M5E03_02045 PF00975 Thioesterase domain M5E03_02060 PF00005 ABC transporter M5E03_02075 PF00892 EamA-like transporter family M5E03_02080 PF00155 Aminotransferase class I and II M5E03_02080 PF00392 Bacterial regulatory proteins, gntR family M5E03_02085 PF01648 4'-phosphopantetheinyl transferase superfamily M5E03_02100 PF02872 5'-nucleotidase, C-terminal domain M5E03_02100 PF00149 Calcineurin-like phosphoesterase M5E03_02105 PF04203 Sortase domain M5E03_02110 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M5E03_02110 PF18277 AbrB C-terminal domain M5E03_02115 PF00005 ABC transporter M5E03_02120 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_02125 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_02130 PF01738 Dienelactone hydrolase family M5E03_02135 PF00324 Amino acid permease M5E03_02140 PF00854 POT family M5E03_02145 PF13229 Right handed beta helix region M5E03_02145 PF12708 Pectate lyase superfamily protein M5E03_02150 PF00296 Luciferase-like monooxygenase M5E03_02155 PF00583 Acetyltransferase (GNAT) family M5E03_02160 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_02165 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_02170 PF00005 ABC transporter M5E03_02175 PF01546 Peptidase family M20/M25/M40 M5E03_02175 PF07687 Peptidase dimerisation domain M5E03_02180 PF03972 MmgE/PrpD family M5E03_02185 PF01740 STAS domain M5E03_02185 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain M5E03_02190 PF00696 Amino acid kinase family M5E03_02190 PF13840 ACT domain M5E03_02195 PF07690 Major Facilitator Superfamily M5E03_02200 PF00440 Bacterial regulatory proteins, tetR family M5E03_02210 PF01022 Bacterial regulatory protein, arsR family M5E03_02215 PF00392 Bacterial regulatory proteins, gntR family M5E03_02215 PF00155 Aminotransferase class I and II M5E03_02220 PF00202 Aminotransferase class-III M5E03_02225 PF13520 Amino acid permease M5E03_02230 PF00171 Aldehyde dehydrogenase family M5E03_02235 PF02525 Flavodoxin-like fold M5E03_02240 PF07987 Domain of unkown function (DUF1775) M5E03_02245 PF13115 YtkA-like M5E03_02245 PF04234 CopC domain M5E03_02245 PF05425 Copper resistance protein D M5E03_02250 PF02378 Phosphotransferase system, EIIC M5E03_02250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_02255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_02260 PF01232 Mannitol dehydrogenase Rossmann domain M5E03_02260 PF08125 Mannitol dehydrogenase C-terminal domain M5E03_02265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_02265 PF02743 Cache domain M5E03_02265 PF00672 HAMP domain M5E03_02285 PF12681 Glyoxalase-like domain M5E03_02290 PF05901 Excalibur calcium-binding domain M5E03_02300 PF03746 LamB/YcsF family M5E03_02305 PF01566 Natural resistance-associated macrophage protein M5E03_02310 PF07286 Protein of unknown function (DUF1445) M5E03_02315 PF02682 Carboxyltransferase domain, subdomain C and D M5E03_02320 PF02626 Carboxyltransferase domain, subdomain A and B M5E03_02325 PF09339 IclR helix-turn-helix domain M5E03_02325 PF01614 Bacterial transcriptional regulator M5E03_02330 PF02525 Flavodoxin-like fold M5E03_02335 PF13472 GDSL-like Lipase/Acylhydrolase family M5E03_02345 PF08279 HTH domain M5E03_02345 PF05043 Mga helix-turn-helix domain M5E03_02345 PF00874 PRD domain M5E03_02345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_02345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_02350 PF13649 Methyltransferase domain M5E03_02360 PF16242 Pyridoxamine 5'-phosphate oxidase like M5E03_02380 PF12823 Domain of unknown function (DUF3817) M5E03_02390 PF01131 DNA topoisomerase M5E03_02390 PF01751 Toprim domain M5E03_02405 PF00990 Diguanylate cyclase, GGDEF domain M5E03_02410 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) M5E03_02420 PF03170 Bacterial cellulose synthase subunit M5E03_02425 PF13520 Amino acid permease M5E03_02430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5E03_02430 PF00205 Thiamine pyrophosphate enzyme, central domain M5E03_02430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5E03_02435 PF14449 Pre-toxin TG M5E03_02435 PF04740 LXG domain of WXG superfamily M5E03_02435 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues M5E03_02460 PF13302 Acetyltransferase (GNAT) domain M5E03_02465 PF01566 Natural resistance-associated macrophage protein M5E03_02470 PF04226 Transglycosylase associated protein M5E03_02475 PF12787 EcsC protein family M5E03_02480 PF03480 Bacterial extracellular solute-binding protein, family 7 M5E03_02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_02485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M5E03_02485 PF17203 Single cache domain 3 M5E03_02490 PF08279 HTH domain M5E03_02490 PF00072 Response regulator receiver domain M5E03_02495 PF00375 Sodium:dicarboxylate symporter family M5E03_02500 PF01594 AI-2E family transporter M5E03_02505 PF00375 Sodium:dicarboxylate symporter family M5E03_02510 PF00005 ABC transporter M5E03_02525 PF13040 Fur-regulated basic protein B M5E03_02530 PF00085 Thioredoxin M5E03_02535 PF07478 D-ala D-ala ligase C-terminus M5E03_02535 PF01820 D-ala D-ala ligase N-terminus M5E03_02540 PF01225 Mur ligase family, catalytic domain M5E03_02540 PF02875 Mur ligase family, glutamate ligase domain M5E03_02540 PF08245 Mur ligase middle domain M5E03_02545 PF12146 Serine aminopeptidase, S33 M5E03_02555 PF00270 DEAD/DEAH box helicase M5E03_02555 PF00271 Helicase conserved C-terminal domain M5E03_02560 PF03703 Bacterial PH domain M5E03_02565 PF03703 Bacterial PH domain M5E03_02570 PF01694 Rhomboid family M5E03_02575 PF01648 4'-phosphopantetheinyl transferase superfamily M5E03_02585 PF01168 Alanine racemase, N-terminal domain M5E03_02585 PF00842 Alanine racemase, C-terminal domain M5E03_02590 PF01402 Ribbon-helix-helix protein, copG family M5E03_02595 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system M5E03_02600 PF08678 Rsbr N terminal M5E03_02600 PF01740 STAS domain M5E03_02605 PF01740 STAS domain M5E03_02610 PF13581 Histidine kinase-like ATPase domain M5E03_02615 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain M5E03_02615 PF07228 Stage II sporulation protein E (SpoIIE) M5E03_02620 PF01740 STAS domain M5E03_02625 PF13581 Histidine kinase-like ATPase domain M5E03_02630 PF04542 Sigma-70 region 2 M5E03_02630 PF04539 Sigma-70 region 3 M5E03_02630 PF04545 Sigma-70, region 4 M5E03_02635 PF07228 Stage II sporulation protein E (SpoIIE) M5E03_02640 PF09371 Tex-like protein N-terminal domain M5E03_02640 PF16921 Tex protein YqgF-like domain M5E03_02640 PF00575 S1 RNA binding domain M5E03_02640 PF17674 HHH domain M5E03_02650 PF17283 SprT-like zinc ribbon domain M5E03_02650 PF10263 SprT-like family M5E03_02655 PF00676 Dehydrogenase E1 component M5E03_02660 PF02780 Transketolase, C-terminal domain M5E03_02660 PF02779 Transketolase, pyrimidine binding domain M5E03_02665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5E03_02665 PF00364 Biotin-requiring enzyme M5E03_02665 PF02817 e3 binding domain M5E03_02670 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_02670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5E03_02675 PF02954 Bacterial regulatory protein, Fis family M5E03_02675 PF00158 Sigma-54 interaction domain M5E03_02675 PF01590 GAF domain M5E03_02720 PF00313 'Cold-shock' DNA-binding domain M5E03_02725 PF02559 CarD-like/TRCF domain M5E03_02730 PF08240 Alcohol dehydrogenase GroES-like domain M5E03_02730 PF00107 Zinc-binding dehydrogenase M5E03_02735 PF13411 MerR HTH family regulatory protein M5E03_02740 PF00722 Glycosyl hydrolases family 16 M5E03_02745 PF00440 Bacterial regulatory proteins, tetR family M5E03_02750 PF07690 Major Facilitator Superfamily M5E03_02755 PF07859 alpha/beta hydrolase fold M5E03_02775 PF00106 short chain dehydrogenase M5E03_02790 PF17763 Glutaminase/Asparaginase C-terminal domain M5E03_02790 PF00710 Asparaginase, N-terminal M5E03_02795 PF00561 alpha/beta hydrolase fold M5E03_02805 PF16925 Tetracyclin repressor-like, C-terminal domain M5E03_02805 PF00440 Bacterial regulatory proteins, tetR family M5E03_02810 PF07690 Major Facilitator Superfamily M5E03_02815 PF12746 GNAT acetyltransferase M5E03_02830 PF00583 Acetyltransferase (GNAT) family M5E03_02835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5E03_02845 PF00440 Bacterial regulatory proteins, tetR family M5E03_02850 PF01872 RibD C-terminal domain M5E03_02855 PF01047 MarR family M5E03_02860 PF00881 Nitroreductase family M5E03_02875 PF01381 Helix-turn-helix M5E03_02875 PF07883 Cupin domain M5E03_02880 PF01810 LysE type translocator M5E03_02895 PF01596 O-methyltransferase M5E03_02905 PF03591 AzlC protein M5E03_02910 PF00892 EamA-like transporter family M5E03_02920 PF00375 Sodium:dicarboxylate symporter family M5E03_02960 PF02769 AIR synthase related protein, C-terminal domain M5E03_02960 PF00586 AIR synthase related protein, N-terminal domain M5E03_02965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M5E03_02970 PF00814 Glycoprotease family M5E03_02975 PF00583 Acetyltransferase (GNAT) family M5E03_02980 PF00814 Glycoprotease family M5E03_02985 PF16326 ABC transporter C-terminal domain M5E03_02985 PF12848 ABC transporter M5E03_02985 PF00005 ABC transporter M5E03_02990 PF01967 MoaC family M5E03_02995 PF02629 CoA binding domain M5E03_02995 PF06971 Putative DNA-binding protein N-terminus M5E03_03000 PF02416 mttA/Hcf106 family M5E03_03005 PF00902 Sec-independent protein translocase protein (TatC) M5E03_03015 PF14146 Domain of unknown function (DUF4305) M5E03_03020 PF02517 CPBP intramembrane metalloprotease M5E03_03025 PF00166 Chaperonin 10 Kd subunit M5E03_03030 PF00118 TCP-1/cpn60 chaperonin family M5E03_03035 PF00589 Phage integrase family M5E03_03035 PF02899 Phage integrase, N-terminal SAM-like domain M5E03_03040 PF06114 IrrE N-terminal-like domain M5E03_03050 PF01381 Helix-turn-helix M5E03_03080 PF01381 Helix-turn-helix M5E03_03085 PF17448 Uncharacterized YqaH-like M5E03_03095 PF09588 YqaJ-like viral recombinase domain M5E03_03100 PF03837 RecT family M5E03_03110 PF01695 IstB-like ATP binding protein M5E03_03115 PF05866 Endodeoxyribonuclease RusA M5E03_03125 PF17356 Phage-like element PBSX protein XtrA M5E03_03170 PF10668 Phage terminase small subunit M5E03_03275 PF05105 Bacteriophage holin family M5E03_03280 PF01510 N-acetylmuramoyl-L-alanine amidase M5E03_03280 PF01471 Putative peptidoglycan binding domain M5E03_03305 PF01850 PIN domain M5E03_03315 PF01047 MarR family M5E03_03320 PF00583 Acetyltransferase (GNAT) family M5E03_03325 PF04299 Putative FMN-binding domain M5E03_03345 PF03330 Lytic transglycolase M5E03_03350 PF07676 WD40-like Beta Propeller Repeat M5E03_03360 PF07732 Multicopper oxidase M5E03_03360 PF00394 Multicopper oxidase M5E03_03360 PF07731 Multicopper oxidase M5E03_03365 PF00324 Amino acid permease M5E03_03370 PF16916 Dimerisation domain of Zinc Transporter M5E03_03370 PF01545 Cation efflux family M5E03_03375 PF07726 ATPase family associated with various cellular activities (AAA) M5E03_03375 PF17863 AAA lid domain M5E03_03380 PF01882 Protein of unknown function DUF58 M5E03_03385 PF11992 Domain of unknown function (DUF3488) M5E03_03385 PF13559 Domain of unknown function (DUF4129) M5E03_03385 PF01841 Transglutaminase-like superfamily M5E03_03390 PF00117 Glutamine amidotransferase class-I M5E03_03390 PF02540 NAD synthase M5E03_03390 PF00958 GMP synthase C terminal domain M5E03_03395 PF04073 Aminoacyl-tRNA editing domain M5E03_03400 PF12833 Helix-turn-helix domain M5E03_03405 PF08502 LeuA allosteric (dimerisation) domain M5E03_03405 PF00682 HMGL-like M5E03_03410 PF12833 Helix-turn-helix domain M5E03_03435 PF00082 Subtilase family M5E03_03440 PF13302 Acetyltransferase (GNAT) domain M5E03_03455 PF04542 Sigma-70 region 2 M5E03_03455 PF08281 Sigma-70, region 4 M5E03_03465 PF07690 Major Facilitator Superfamily M5E03_03470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_03470 PF03466 LysR substrate binding domain M5E03_03475 PF00860 Permease family M5E03_03495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M5E03_03500 PF14044 NETI protein M5E03_03505 PF00731 AIR carboxylase M5E03_03510 PF02222 ATP-grasp domain M5E03_03510 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M5E03_03515 PF10397 Adenylosuccinate lyase C-terminus M5E03_03515 PF00206 Lyase M5E03_03520 PF01259 SAICAR synthetase M5E03_03525 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase M5E03_03535 PF00586 AIR synthase related protein, N-terminal domain M5E03_03535 PF02769 AIR synthase related protein, C-terminal domain M5E03_03535 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M5E03_03540 PF00156 Phosphoribosyl transferase domain M5E03_03545 PF00586 AIR synthase related protein, N-terminal domain M5E03_03545 PF02769 AIR synthase related protein, C-terminal domain M5E03_03550 PF00551 Formyl transferase M5E03_03555 PF01808 AICARFT/IMPCHase bienzyme M5E03_03555 PF02142 MGS-like domain M5E03_03560 PF02844 Phosphoribosylglycinamide synthetase, N domain M5E03_03560 PF02843 Phosphoribosylglycinamide synthetase, C domain M5E03_03560 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M5E03_03580 PF00202 Aminotransferase class-III M5E03_03585 PF01144 Coenzyme A transferase M5E03_03590 PF01144 Coenzyme A transferase M5E03_03595 PF07687 Peptidase dimerisation domain M5E03_03595 PF01546 Peptidase family M20/M25/M40 M5E03_03600 PF11127 Protein of unknown function (DUF2892) M5E03_03605 PF13382 Adenine deaminase C-terminal domain M5E03_03605 PF01979 Amidohydrolase family M5E03_03610 PF01371 Trp repressor protein M5E03_03615 PF01645 Conserved region in glutamate synthase M5E03_03630 PF01884 PcrB family M5E03_03635 PF13361 UvrD-like helicase C-terminal domain M5E03_03635 PF00580 UvrD/REP helicase N-terminal domain M5E03_03640 PF03120 NAD-dependent DNA ligase OB-fold domain M5E03_03640 PF00533 BRCA1 C Terminus (BRCT) domain M5E03_03640 PF01653 NAD-dependent DNA ligase adenylation domain M5E03_03640 PF03119 NAD-dependent DNA ligase C4 zinc finger domain M5E03_03640 PF12826 Helix-hairpin-helix motif M5E03_03645 PF07537 CamS sex pheromone cAM373 precursor M5E03_03650 PF01636 Phosphotransferase enzyme family M5E03_03655 PF02308 MgtC family M5E03_03660 PF00474 Sodium:solute symporter family M5E03_03665 PF02686 Glu-tRNAGln amidotransferase C subunit M5E03_03670 PF01425 Amidase M5E03_03675 PF02637 GatB domain M5E03_03675 PF02934 GatB/GatE catalytic domain M5E03_03680 PF00440 Bacterial regulatory proteins, tetR family M5E03_03685 PF00873 AcrB/AcrD/AcrF family M5E03_03690 PF01156 Inosine-uridine preferring nucleoside hydrolase M5E03_03695 PF00781 Diacylglycerol kinase catalytic domain M5E03_03700 PF01938 TRAM domain M5E03_03700 PF05958 tRNA (Uracil-5-)-methyltransferase M5E03_03730 PF13176 Tetratricopeptide repeat M5E03_03730 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_03735 PF01207 Dihydrouridine synthase (Dus) M5E03_03745 PF01418 Helix-turn-helix domain, rpiR family M5E03_03745 PF01380 SIS domain M5E03_03750 PF02378 Phosphotransferase system, EIIC M5E03_03750 PF00367 phosphotransferase system, EIIB M5E03_03755 PF02056 Family 4 glycosyl hydrolase M5E03_03755 PF11975 Family 4 glycosyl hydrolase C-terminal domain M5E03_03765 PF02082 Transcriptional regulator M5E03_03770 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_03780 PF13021 Domain of unknown function (DUF3885) M5E03_03785 PF02056 Family 4 glycosyl hydrolase M5E03_03785 PF11975 Family 4 glycosyl hydrolase C-terminal domain M5E03_03790 PF01418 Helix-turn-helix domain, rpiR family M5E03_03790 PF01380 SIS domain M5E03_03795 PF07690 Major Facilitator Superfamily M5E03_03805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_03805 PF03466 LysR substrate binding domain M5E03_03815 PF13037 Domain of unknown function (DUF3898) M5E03_03815 PF13039 Protein of unknown function (DUF3900) M5E03_03825 PF00483 Nucleotidyl transferase M5E03_03830 PF16363 GDP-mannose 4,6 dehydratase M5E03_03835 PF03407 Nucleotide-diphospho-sugar transferase M5E03_03840 PF00535 Glycosyl transferase family 2 M5E03_03845 PF03407 Nucleotide-diphospho-sugar transferase M5E03_03850 PF07690 Major Facilitator Superfamily M5E03_03855 PF00905 Penicillin binding protein transpeptidase domain M5E03_03855 PF03717 Penicillin-binding Protein dimerisation domain M5E03_03855 PF05223 NTF2-like N-terminal transpeptidase domain M5E03_03870 PF01965 DJ-1/PfpI family M5E03_03885 PF00011 Hsp20/alpha crystallin family M5E03_03900 PF13520 Amino acid permease M5E03_03905 PF00535 Glycosyl transferase family 2 M5E03_03905 PF13181 Tetratricopeptide repeat M5E03_03910 PF00005 ABC transporter M5E03_03910 PF16326 ABC transporter C-terminal domain M5E03_03910 PF12848 ABC transporter M5E03_03915 PF02649 Type I GTP cyclohydrolase folE2 M5E03_03920 PF13411 MerR HTH family regulatory protein M5E03_03925 PF07690 Major Facilitator Superfamily M5E03_03930 PF00005 ABC transporter M5E03_03930 PF12848 ABC transporter M5E03_03935 PF00270 DEAD/DEAH box helicase M5E03_03935 PF00271 Helicase conserved C-terminal domain M5E03_03940 PF00107 Zinc-binding dehydrogenase M5E03_03940 PF16884 N-terminal domain of oxidoreductase M5E03_03945 PF11486 Protein of unknown function (DUF3212) M5E03_03950 PF11181 Heat induced stress protein YflT M5E03_03960 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M5E03_03960 PF00925 GTP cyclohydrolase II M5E03_03965 PF03781 Sulfatase-modifying factor enzyme 1 M5E03_03975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5E03_03975 PF01872 RibD C-terminal domain M5E03_03985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_03985 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M5E03_03990 PF12431 Transcriptional regulator M5E03_03990 PF08279 HTH domain M5E03_03990 PF00072 Response regulator receiver domain M5E03_03995 PF03401 Tripartite tricarboxylate transporter family receptor M5E03_04000 PF03600 Citrate transporter M5E03_04010 PF05870 Phenolic acid decarboxylase (PAD) M5E03_04015 PF03551 Transcriptional regulator PadR-like family M5E03_04015 PF10400 Virulence activator alpha C-term M5E03_04020 PF02898 Nitric oxide synthase, oxygenase domain M5E03_04025 PF07690 Major Facilitator Superfamily M5E03_04030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_04030 PF03466 LysR substrate binding domain M5E03_04035 PF00708 Acylphosphatase M5E03_04040 PF03473 MOSC domain M5E03_04040 PF03475 3-alpha domain M5E03_04045 PF11121 Protein of unknown function (DUF2639) M5E03_04055 PF00557 Metallopeptidase family M24 M5E03_04060 PF02378 Phosphotransferase system, EIIC M5E03_04060 PF00367 phosphotransferase system, EIIB M5E03_04065 PF05675 Protein of unknown function (DUF817) M5E03_04075 PF14172 Domain of unknown function (DUF4309) M5E03_04080 PF00884 Sulfatase M5E03_04085 PF00282 Pyridoxal-dependent decarboxylase conserved domain M5E03_04090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_04090 PF00672 HAMP domain M5E03_04095 PF09350 Domain of unknown function (DUF1992) M5E03_04100 PF00367 phosphotransferase system, EIIB M5E03_04100 PF02378 Phosphotransferase system, EIIC M5E03_04105 PF16657 Maltogenic Amylase, C-terminal domain M5E03_04105 PF00128 Alpha amylase, catalytic domain M5E03_04110 PF07702 UTRA domain M5E03_04110 PF00392 Bacterial regulatory proteins, gntR family M5E03_04120 PF02872 5'-nucleotidase, C-terminal domain M5E03_04120 PF00149 Calcineurin-like phosphoesterase M5E03_04125 PF01965 DJ-1/PfpI family M5E03_04130 PF06569 Protein of unknown function (DUF1128) M5E03_04135 PF01235 Sodium:alanine symporter family M5E03_04140 PF01451 Low molecular weight phosphotyrosine protein phosphatase M5E03_04150 PF03631 Virulence factor BrkB M5E03_04165 PF07690 Major Facilitator Superfamily M5E03_04175 PF01699 Sodium/calcium exchanger protein M5E03_04180 PF14167 YfkD-like protein M5E03_04185 PF01709 Transcriptional regulator M5E03_04190 PF00924 Mechanosensitive ion channel M5E03_04195 PF04055 Radical SAM superfamily M5E03_04195 PF08756 YfkB-like domain M5E03_04205 PF01522 Polysaccharide deacetylase M5E03_04210 PF01544 CorA-like Mg2+ transporter protein M5E03_04220 PF00730 HhH-GPD superfamily base excision DNA repair protein M5E03_04225 PF01938 TRAM domain M5E03_04225 PF05958 tRNA (Uracil-5-)-methyltransferase M5E03_04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_04240 PF03466 LysR substrate binding domain M5E03_04245 PF14552 Tautomerase enzyme M5E03_04250 PF02627 Carboxymuconolactone decarboxylase family M5E03_04255 PF13411 MerR HTH family regulatory protein M5E03_04255 PF07739 TipAS antibiotic-recognition domain M5E03_04260 PF07690 Major Facilitator Superfamily M5E03_04315 PF00893 Small Multidrug Resistance protein M5E03_04320 PF00893 Small Multidrug Resistance protein M5E03_04325 PF17934 Tetracyclin repressor-like, C-terminal domain M5E03_04325 PF00440 Bacterial regulatory proteins, tetR family M5E03_04340 PF00657 GDSL-like Lipase/Acylhydrolase M5E03_04345 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_04350 PF02694 Uncharacterised BCR, YnfA/UPF0060 family M5E03_04355 PF04545 Sigma-70, region 4 M5E03_04355 PF04542 Sigma-70 region 2 M5E03_04370 PF00107 Zinc-binding dehydrogenase M5E03_04370 PF08240 Alcohol dehydrogenase GroES-like domain M5E03_04375 PF12867 DinB superfamily M5E03_04385 PF01047 MarR family M5E03_04390 PF03706 Lysylphosphatidylglycerol synthase TM region M5E03_04390 PF09924 Uncharacterised conserved protein (DUF2156) M5E03_04405 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_04410 PF00881 Nitroreductase family M5E03_04425 PF08338 Domain of unknown function (DUF1731) M5E03_04425 PF01370 NAD dependent epimerase/dehydratase family M5E03_04430 PF02631 RecX family M5E03_04435 PF08838 Protein of unknown function (DUF1811) M5E03_04445 PF08176 Small acid-soluble spore protein K family M5E03_04450 PF14043 WVELL protein M5E03_04455 PF00535 Glycosyl transferase family 2 M5E03_04460 PF09586 Bacterial membrane protein YfhO M5E03_04465 PF01494 FAD binding domain M5E03_04480 PF00190 Cupin M5E03_04485 PF12841 YvrJ protein family M5E03_04490 PF04545 Sigma-70, region 4 M5E03_04535 PF04307 LexA-binding, inner membrane-associated putative hydrolase M5E03_04540 PF00730 HhH-GPD superfamily base excision DNA repair protein M5E03_04540 PF14815 NUDIX domain M5E03_04565 PF04167 Protein of unknown function (DUF402) M5E03_04570 PF00005 ABC transporter M5E03_04570 PF00664 ABC transporter transmembrane region M5E03_04575 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_04575 PF00005 ABC transporter M5E03_04580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_04580 PF00005 ABC transporter M5E03_04585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5E03_04590 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_04595 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_04595 PF12911 N-terminal TM domain of oligopeptide transport permease C M5E03_04600 PF06081 Aromatic acid exporter family member 1 M5E03_04605 PF00202 Aminotransferase class-III M5E03_04610 PF00578 AhpC/TSA family M5E03_04615 PF01475 Ferric uptake regulator family M5E03_04620 PF11023 Zinc-ribbon containing domain M5E03_04625 PF18576 Helix-turn-helix domain M5E03_04625 PF14540 Nucleotidyltransferase-like M5E03_04760 PF00884 Sulfatase M5E03_04765 PF10502 Signal peptidase, peptidase S26 M5E03_04770 PF01053 Cys/Met metabolism PLP-dependent enzyme M5E03_04780 PF00005 ABC transporter M5E03_04785 PF09084 NMT1/THI5 like M5E03_04790 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_04795 PF00296 Luciferase-like monooxygenase M5E03_04805 PF00005 ABC transporter M5E03_04840 PF08331 Domain of unknown function (DUF1730) M5E03_04845 PF12671 Putative amidase domain M5E03_04850 PF00588 SpoU rRNA Methylase family M5E03_04855 PF15493 Domain of unknown function, YrpD M5E03_04860 PF08298 PrkA AAA domain M5E03_04860 PF06798 PrkA serine protein kinase C-terminal domain M5E03_04865 PF04285 Protein of unknown function (DUF444) M5E03_04875 PF07690 Major Facilitator Superfamily M5E03_04880 PF03358 NADPH-dependent FMN reductase M5E03_04890 PF00313 'Cold-shock' DNA-binding domain M5E03_04895 PF07694 5TMR of 5TMR-LYT M5E03_04895 PF00990 Diguanylate cyclase, GGDEF domain M5E03_04910 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M5E03_04920 PF07875 Coat F domain M5E03_04925 PF13426 PAS domain M5E03_04925 PF13188 PAS domain M5E03_04925 PF00989 PAS fold M5E03_04925 PF00512 His Kinase A (phospho-acceptor) domain M5E03_04925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_04930 PF00149 Calcineurin-like phosphoesterase M5E03_04930 PF00565 Staphylococcal nuclease homologue M5E03_04930 PF02872 5'-nucleotidase, C-terminal domain M5E03_04930 PF00746 LPXTG cell wall anchor motif M5E03_04935 PF04203 Sortase domain M5E03_04940 PF00849 RNA pseudouridylate synthase M5E03_04940 PF01479 S4 domain M5E03_04950 PF13419 Haloacid dehalogenase-like hydrolase M5E03_04955 PF00795 Carbon-nitrogen hydrolase M5E03_04955 PF00583 Acetyltransferase (GNAT) family M5E03_04970 PF05651 Putative sugar diacid recognition M5E03_04970 PF17853 GGDEF-like domain M5E03_04970 PF13556 PucR C-terminal helix-turn-helix domain M5E03_04975 PF00202 Aminotransferase class-III M5E03_04980 PF04309 Glycerol-3-phosphate responsive antiterminator M5E03_04985 PF00230 Major intrinsic protein M5E03_04990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M5E03_04990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M5E03_04995 PF01266 FAD dependent oxidoreductase M5E03_04995 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M5E03_05000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M5E03_05000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M5E03_05000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M5E03_05000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M5E03_05005 PF07730 Histidine kinase M5E03_05005 PF13185 GAF domain M5E03_05010 PF00072 Response regulator receiver domain M5E03_05010 PF00196 Bacterial regulatory proteins, luxR family M5E03_05015 PF14148 YhdB-like protein M5E03_05020 PF13028 Protein of unknown function (DUF3889) M5E03_05025 PF00199 Catalase M5E03_05025 PF06628 Catalase-related immune-responsive M5E03_05030 PF02082 Transcriptional regulator M5E03_05035 PF00970 Oxidoreductase FAD-binding domain M5E03_05035 PF00042 Globin M5E03_05035 PF00175 Oxidoreductase NAD-binding domain M5E03_05040 PF04293 SpoVR like protein M5E03_05045 PF08666 SAF domain M5E03_05045 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M5E03_05050 PF00392 Bacterial regulatory proteins, gntR family M5E03_05050 PF07729 FCD domain M5E03_05055 PF13378 Enolase C-terminal domain-like M5E03_05060 PF07690 Major Facilitator Superfamily M5E03_05065 PF00171 Aldehyde dehydrogenase family M5E03_05070 PF00701 Dihydrodipicolinate synthetase family M5E03_05075 PF00245 Alkaline phosphatase M5E03_05080 PF01476 LysM domain M5E03_05080 PF00877 NlpC/P60 family M5E03_05085 PF13520 Amino acid permease M5E03_05090 PF17453 Sigma-M inhibitor M5E03_05095 PF13791 Sigma factor regulator C-terminal M5E03_05095 PF13800 Sigma factor regulator N-terminal M5E03_05100 PF08281 Sigma-70, region 4 M5E03_05100 PF04542 Sigma-70 region 2 M5E03_05105 PF01553 Acyltransferase M5E03_05110 PF00571 CBS domain M5E03_05110 PF03471 Transporter associated domain M5E03_05110 PF01595 Cyclin M transmembrane N-terminal domain M5E03_05115 PF13411 MerR HTH family regulatory protein M5E03_05120 PF01595 Cyclin M transmembrane N-terminal domain M5E03_05120 PF00571 CBS domain M5E03_05120 PF03471 Transporter associated domain M5E03_05130 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M5E03_05135 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M5E03_05140 PF03009 Glycerophosphoryl diester phosphodiesterase family M5E03_05145 PF17444 Uncharacterized YhdX-like M5E03_05150 PF00924 Mechanosensitive ion channel M5E03_05155 PF02146 Sir2 family M5E03_05160 PF01522 Polysaccharide deacetylase M5E03_05165 PF01063 Amino-transferase class IV M5E03_05170 PF00582 Universal stress protein family M5E03_05175 PF00664 ABC transporter transmembrane region M5E03_05175 PF00005 ABC transporter M5E03_05180 PF00005 ABC transporter M5E03_05180 PF00664 ABC transporter transmembrane region M5E03_05185 PF13460 NAD(P)H-binding M5E03_05190 PF00269 Small, acid-soluble spore proteins, alpha/beta type M5E03_05195 PF03459 TOBE domain M5E03_05195 PF17912 MalK OB fold domain M5E03_05195 PF00005 ABC transporter M5E03_05200 PF13556 PucR C-terminal helix-turn-helix domain M5E03_05205 PF17277 Family of unknown function (DUF5342) M5E03_05210 PF14398 YheC/D like ATP-grasp M5E03_05215 PF14398 YheC/D like ATP-grasp M5E03_05220 PF04286 Protein of unknown function (DUF445) M5E03_05225 PF06133 Control of competence regulator ComK, YlbF/YmcA M5E03_05235 PF04055 Radical SAM superfamily M5E03_05240 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M5E03_05245 PF00999 Sodium/hydrogen exchanger family M5E03_05250 PF02080 TrkA-C domain M5E03_05260 PF00378 Enoyl-CoA hydratase/isomerase M5E03_05265 PF14120 YhzD-like protein M5E03_05270 PF00149 Calcineurin-like phosphoesterase M5E03_05275 PF13514 AAA domain M5E03_05280 PF01966 HD domain M5E03_05285 PF14147 Sporulation protein YhaL M5E03_05295 PF09680 Family of unknown function M5E03_05300 PF09680 Family of unknown function M5E03_05310 PF11667 Putative zincin peptidase M5E03_05315 PF08963 Protein of unknown function (DUF1878) M5E03_05320 PF01047 MarR family M5E03_05325 PF12732 YtxH-like protein M5E03_05335 PF17099 Tryptophan transporter TrpP M5E03_05340 PF00266 Aminotransferase class-V M5E03_05345 PF01230 HIT domain M5E03_05350 PF00005 ABC transporter M5E03_05355 PF05975 Bacterial ABC transporter protein EcsB M5E03_05360 PF12787 EcsC protein family M5E03_05365 PF07687 Peptidase dimerisation domain M5E03_05365 PF01546 Peptidase family M20/M25/M40 M5E03_05375 PF03992 Antibiotic biosynthesis monooxygenase M5E03_05380 PF00912 Transglycosylase M5E03_05380 PF00905 Penicillin binding protein transpeptidase domain M5E03_05385 PF01208 Uroporphyrinogen decarboxylase (URO-D) M5E03_05390 PF00762 Ferrochelatase M5E03_05395 PF01593 Flavin containing amine oxidoreductase M5E03_05400 PF17932 Tetracyclin repressor-like, C-terminal domain M5E03_05400 PF00440 Bacterial regulatory proteins, tetR family M5E03_05410 PF05343 M42 glutamyl aminopeptidase M5E03_05415 PF00375 Sodium:dicarboxylate symporter family M5E03_05420 PF14149 YhfH-like protein M5E03_05425 PF12706 Beta-lactamase superfamily domain M5E03_05430 PF03099 Biotin/lipoate A/B protein ligase family M5E03_05430 PF10437 Bacterial lipoate protein ligase C-terminus M5E03_05435 PF00501 AMP-binding enzyme M5E03_05435 PF13193 AMP-binding enzyme C-terminal domain M5E03_05445 PF01435 Peptidase family M48 M5E03_05445 PF16491 CAAX prenyl protease N-terminal, five membrane helices M5E03_05450 PF05922 Peptidase inhibitor I9 M5E03_05450 PF00082 Subtilase family M5E03_05455 PF00300 Histidine phosphatase superfamily (branch 1) M5E03_05460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_05465 PF01266 FAD dependent oxidoreductase M5E03_05465 PF00355 Rieske [2Fe-2S] domain M5E03_05475 PF08858 IDEAL domain M5E03_05480 PF06338 ComK protein M5E03_05490 PF00155 Aminotransferase class I and II M5E03_05490 PF00392 Bacterial regulatory proteins, gntR family M5E03_05495 PF07690 Major Facilitator Superfamily M5E03_05500 PF01337 Barstar (barnase inhibitor) M5E03_05505 PF01032 FecCD transport family M5E03_05510 PF01032 FecCD transport family M5E03_05515 PF00005 ABC transporter M5E03_05520 PF01497 Periplasmic binding protein M5E03_05525 PF03816 Cell envelope-related transcriptional attenuator domain M5E03_05535 PF09335 SNARE associated Golgi protein M5E03_05540 PF10502 Signal peptidase, peptidase S26 M5E03_05545 PF05145 Transition state regulatory protein AbrB M5E03_05555 PF01435 Peptidase family M48 M5E03_05560 PF07681 DoxX M5E03_05565 PF02915 Rubrerythrin M5E03_05570 PF12705 PD-(D/E)XK nuclease superfamily M5E03_05575 PF12705 PD-(D/E)XK nuclease superfamily M5E03_05575 PF13361 UvrD-like helicase C-terminal domain M5E03_05575 PF00580 UvrD/REP helicase N-terminal domain M5E03_05580 PF00149 Calcineurin-like phosphoesterase M5E03_05580 PF12320 Type 5 capsule protein repressor C-terminal domain M5E03_05585 PF13476 AAA domain M5E03_05595 PF10676 Spore germination protein gerPA/gerPF M5E03_05600 PF10970 Spore germination protein GerPE M5E03_05610 PF10737 Spore germination protein GerPC M5E03_05615 PF10803 Spore germination GerPB M5E03_05620 PF10676 Spore germination protein gerPA/gerPF M5E03_05630 PF08757 CotH kinase protein M5E03_05635 PF01557 Fumarylacetoacetate (FAA) hydrolase family M5E03_05640 PF07457 Protein of unknown function (DUF1516) M5E03_05645 PF10949 Protein of unknown function (DUF2777) M5E03_05650 PF13537 Glutamine amidotransferase domain M5E03_05650 PF00733 Asparagine synthase M5E03_05655 PF01593 Flavin containing amine oxidoreductase M5E03_05660 PF01593 Flavin containing amine oxidoreductase M5E03_05670 PF01554 MatE M5E03_05675 PF12833 Helix-turn-helix domain M5E03_05675 PF02311 AraC-like ligand binding domain M5E03_05695 PF00202 Aminotransferase class-III M5E03_05700 PF00282 Pyridoxal-dependent decarboxylase conserved domain M5E03_05705 PF06276 Ferric iron reductase FhuF-like transporter M5E03_05705 PF04183 IucA / IucC family M5E03_05715 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M5E03_05720 PF06276 Ferric iron reductase FhuF-like transporter M5E03_05720 PF04183 IucA / IucC family M5E03_05730 PF02310 B12 binding domain M5E03_05730 PF02607 B12 binding domain M5E03_05730 PF02965 Vitamin B12 dependent methionine synthase, activation domain M5E03_05730 PF00809 Pterin binding enzyme M5E03_05730 PF02574 Homocysteine S-methyltransferase M5E03_05735 PF02574 Homocysteine S-methyltransferase M5E03_05735 PF02219 Methylenetetrahydrofolate reductase M5E03_05740 PF04461 Protein of unknown function (DUF520) M5E03_05745 PF13509 S1 domain M5E03_05745 PF17783 CvfB-like winged helix domain M5E03_05750 PF02608 ABC transporter substrate-binding protein PnrA-like M5E03_05755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_05755 PF02743 Cache domain M5E03_05755 PF00672 HAMP domain M5E03_05760 PF02645 Uncharacterised protein, DegV family COG1307 M5E03_05765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M5E03_05765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M5E03_05770 PF12690 Intracellular proteinase inhibitor M5E03_05775 PF12758 Protein of unknown function (DUF3813) M5E03_05790 PF00326 Prolyl oligopeptidase family M5E03_05795 PF01883 Iron-sulfur cluster assembly protein M5E03_05800 PF01565 FAD binding domain M5E03_05805 PF07690 Major Facilitator Superfamily M5E03_05810 PF01118 Semialdehyde dehydrogenase, NAD binding domain M5E03_05810 PF02774 Semialdehyde dehydrogenase, dimerisation domain M5E03_05815 PF01960 ArgJ family M5E03_05820 PF00696 Amino acid kinase family M5E03_05825 PF00202 Aminotransferase class-III M5E03_05830 PF00117 Glutamine amidotransferase class-I M5E03_05830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M5E03_05835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M5E03_05835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5E03_05840 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M5E03_05840 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M5E03_05845 PF14168 YjzC-like protein M5E03_05850 PF07690 Major Facilitator Superfamily M5E03_05855 PF11151 Protein of unknown function (DUF2929) M5E03_05870 PF02608 ABC transporter substrate-binding protein PnrA-like M5E03_05875 PF10815 ComZ M5E03_05885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M5E03_05885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M5E03_05890 PF02801 Beta-ketoacyl synthase, C-terminal domain M5E03_05890 PF00109 Beta-ketoacyl synthase, N-terminal domain M5E03_05895 PF10026 Predicted Zn-dependent protease (DUF2268) M5E03_05900 PF00005 ABC transporter M5E03_05900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_05905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_05905 PF00005 ABC transporter M5E03_05910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5E03_05915 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_05920 PF12911 N-terminal TM domain of oligopeptide transport permease C M5E03_05920 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_05925 PF12227 Protein of unknown function (DUF3603) M5E03_05930 PF00579 tRNA synthetases class I (W and Y) M5E03_05935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5E03_05940 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_05945 PF12911 N-terminal TM domain of oligopeptide transport permease C M5E03_05945 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_05950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_05950 PF00005 ABC transporter M5E03_05955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_05955 PF00005 ABC transporter M5E03_05965 PF13508 Acetyltransferase (GNAT) domain M5E03_05970 PF03960 ArsC family M5E03_05975 PF03741 Integral membrane protein TerC family M5E03_05980 PF05389 Negative regulator of genetic competence (MecA) M5E03_05985 PF13091 PLD-like domain M5E03_05985 PF13396 Phospholipase_D-nuclease N-terminal M5E03_05995 PF08439 Oligopeptidase F M5E03_05995 PF01432 Peptidase family M3 M5E03_06010 PF01152 Bacterial-like globin M5E03_06015 PF01464 Transglycosylase SLT domain M5E03_06020 PF01928 CYTH domain M5E03_06030 PF04607 Region found in RelA / SpoT proteins M5E03_06035 PF01513 ATP-NAD kinase M5E03_06040 PF00849 RNA pseudouridylate synthase M5E03_06045 PF00149 Calcineurin-like phosphoesterase M5E03_06050 PF02254 TrkA-N domain M5E03_06050 PF02080 TrkA-C domain M5E03_06050 PF00999 Sodium/hydrogen exchanger family M5E03_06055 PF03070 TENA/THI-4/PQQC family M5E03_06060 PF02581 Thiamine monophosphate synthase M5E03_06065 PF01266 FAD dependent oxidoreductase M5E03_06070 PF02597 ThiS family M5E03_06075 PF05690 Thiazole biosynthesis protein ThiG M5E03_06080 PF00899 ThiF family M5E03_06085 PF08543 Phosphomethylpyrimidine kinase M5E03_06095 PF14153 Spore coat protein CotO M5E03_06100 PF10612 Spore coat protein Z M5E03_06105 PF10612 Spore coat protein Z M5E03_06110 PF07552 Spore Coat Protein X and V domain M5E03_06120 PF07552 Spore Coat Protein X and V domain M5E03_06125 PF07098 Protein of unknown function (DUF1360) M5E03_06140 PF14069 Stage VI sporulation protein F M5E03_06145 PF00580 UvrD/REP helicase N-terminal domain M5E03_06145 PF13361 UvrD-like helicase C-terminal domain M5E03_06155 PF13673 Acetyltransferase (GNAT) domain M5E03_06165 PF00756 Putative esterase M5E03_06170 PF01053 Cys/Met metabolism PLP-dependent enzyme M5E03_06175 PF01053 Cys/Met metabolism PLP-dependent enzyme M5E03_06185 PF01810 LysE type translocator M5E03_06190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M5E03_06205 PF00302 Chloramphenicol acetyltransferase M5E03_06210 PF13176 Tetratricopeptide repeat M5E03_06210 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_06225 PF18593 CdiI immunity protein M5E03_06235 PF01636 Phosphotransferase enzyme family M5E03_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_06240 PF03466 LysR substrate binding domain M5E03_06245 PF01177 Asp/Glu/Hydantoin racemase M5E03_06260 PF03466 LysR substrate binding domain M5E03_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_06265 PF07690 Major Facilitator Superfamily M5E03_06275 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_06295 PF00842 Alanine racemase, C-terminal domain M5E03_06295 PF01168 Alanine racemase, N-terminal domain M5E03_06305 PF00700 Bacterial flagellin C-terminal helical region M5E03_06305 PF00669 Bacterial flagellin N-terminal helical region M5E03_06310 PF00700 Bacterial flagellin C-terminal helical region M5E03_06310 PF00669 Bacterial flagellin N-terminal helical region M5E03_06315 PF00700 Bacterial flagellin C-terminal helical region M5E03_06315 PF00669 Bacterial flagellin N-terminal helical region M5E03_06320 PF01494 FAD binding domain M5E03_06335 PF05908 Poly-gamma-glutamate hydrolase M5E03_06340 PF06114 IrrE N-terminal-like domain M5E03_06345 PF01471 Putative peptidoglycan binding domain M5E03_06345 PF01476 LysM domain M5E03_06345 PF01510 N-acetylmuramoyl-L-alanine amidase M5E03_06350 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system M5E03_06355 PF14171 Toxin SpoIISA, type II toxin-antitoxin system M5E03_06360 PF01384 Phosphate transporter family M5E03_06365 PF01865 Protein of unknown function DUF47 M5E03_06385 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_06390 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_06395 PF00005 ABC transporter M5E03_06395 PF17850 CysA C-terminal regulatory domain M5E03_06395 PF12857 TOBE-like domain M5E03_06405 PF03611 PTS system sugar-specific permease component M5E03_06420 PF08240 Alcohol dehydrogenase GroES-like domain M5E03_06420 PF00107 Zinc-binding dehydrogenase M5E03_06425 PF00676 Dehydrogenase E1 component M5E03_06430 PF02780 Transketolase, C-terminal domain M5E03_06430 PF02779 Transketolase, pyrimidine binding domain M5E03_06430 PF00364 Biotin-requiring enzyme M5E03_06435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5E03_06435 PF00364 Biotin-requiring enzyme M5E03_06435 PF02817 e3 binding domain M5E03_06440 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_06440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5E03_06455 PF04198 Putative sugar-binding domain M5E03_06465 PF13520 Amino acid permease M5E03_06470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5E03_06475 PF13180 PDZ domain M5E03_06480 PF03807 NADP oxidoreductase coenzyme F420-dependent M5E03_06480 PF14748 Pyrroline-5-carboxylate reductase dimerisation M5E03_06485 PF04951 D-aminopeptidase M5E03_06490 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_06495 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_06495 PF12911 N-terminal TM domain of oligopeptide transport permease C M5E03_06500 PF00005 ABC transporter M5E03_06500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_06505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5E03_06510 PF02016 LD-carboxypeptidase N-terminal domain M5E03_06510 PF17676 LD-carboxypeptidase C-terminal domain M5E03_06515 PF13378 Enolase C-terminal domain-like M5E03_06515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M5E03_06520 PF00877 NlpC/P60 family M5E03_06525 PF00005 ABC transporter M5E03_06525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_06535 PF03061 Thioesterase superfamily M5E03_06540 PF03551 Transcriptional regulator PadR-like family M5E03_06555 PF13302 Acetyltransferase (GNAT) domain M5E03_06560 PF02805 Metal binding domain of Ada M5E03_06560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M5E03_06560 PF12833 Helix-turn-helix domain M5E03_06560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M5E03_06565 PF09501 Probable sporulation protein (Bac_small_yrzI) M5E03_06570 PF00893 Small Multidrug Resistance protein M5E03_06575 PF00893 Small Multidrug Resistance protein M5E03_06585 PF01842 ACT domain M5E03_06585 PF00551 Formyl transferase M5E03_06590 PF00696 Amino acid kinase family M5E03_06590 PF01472 PUA domain M5E03_06595 PF00171 Aldehyde dehydrogenase family M5E03_06600 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_06610 PF02566 OsmC-like protein M5E03_06615 PF01047 MarR family M5E03_06620 PF02566 OsmC-like protein M5E03_06625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5E03_06630 PF08267 Cobalamin-independent synthase, N-terminal domain M5E03_06630 PF01717 Cobalamin-independent synthase, Catalytic domain M5E03_06635 PF00082 Subtilase family M5E03_06640 PF00072 Response regulator receiver domain M5E03_06640 PF00486 Transcriptional regulatory protein, C terminal M5E03_06645 PF00672 HAMP domain M5E03_06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_06645 PF00512 His Kinase A (phospho-acceptor) domain M5E03_06650 PF03413 Peptidase propeptide and YPEB domain M5E03_06655 PF03413 Peptidase propeptide and YPEB domain M5E03_06665 PF01769 Divalent cation transporter M5E03_06665 PF03448 MgtE intracellular N domain M5E03_06665 PF00571 CBS domain M5E03_06675 PF13411 MerR HTH family regulatory protein M5E03_06690 PF01047 MarR family M5E03_06695 PF00563 EAL domain M5E03_06695 PF00990 Diguanylate cyclase, GGDEF domain M5E03_06695 PF03707 Bacterial signalling protein N terminal repeat M5E03_06700 PF09335 SNARE associated Golgi protein M5E03_06710 PF04542 Sigma-70 region 2 M5E03_06715 PF12791 Anti-sigma factor N-terminus M5E03_06720 PF00269 Small, acid-soluble spore proteins, alpha/beta type M5E03_06725 PF08876 Domain of unknown function (DUF1836) M5E03_06730 PF01435 Peptidase family M48 M5E03_06735 PF02386 Cation transport protein M5E03_06740 PF04239 Protein of unknown function (DUF421) M5E03_06755 PF01757 Acyltransferase family M5E03_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_06760 PF00512 His Kinase A (phospho-acceptor) domain M5E03_06760 PF00989 PAS fold M5E03_06760 PF13188 PAS domain M5E03_06760 PF13426 PAS domain M5E03_06765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain M5E03_06765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M5E03_06775 PF01008 Initiation factor 2 subunit family M5E03_06780 PF01636 Phosphotransferase enzyme family M5E03_06785 PF00155 Aminotransferase class I and II M5E03_06790 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain M5E03_06790 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain M5E03_06800 PF00596 Class II Aldolase and Adducin N-terminal domain M5E03_06805 PF03079 ARD/ARD' family M5E03_06810 PF09388 Spo0E like sporulation regulatory protein M5E03_06815 PF02743 Cache domain M5E03_06815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_06815 PF00512 His Kinase A (phospho-acceptor) domain M5E03_06820 PF01047 MarR family M5E03_06825 PF13677 Membrane MotB of proton-channel complex MotA/MotB M5E03_06825 PF00691 OmpA family M5E03_06830 PF01618 MotA/TolQ/ExbB proton channel family M5E03_06835 PF00004 ATPase family associated with various cellular activities (AAA) M5E03_06835 PF07724 AAA domain (Cdc48 subfamily) M5E03_06835 PF17871 AAA lid domain M5E03_06835 PF10431 C-terminal, D2-small domain, of ClpB protein M5E03_06845 PF06508 Queuosine biosynthesis protein QueC M5E03_06850 PF01242 6-pyruvoyl tetrahydropterin synthase M5E03_06855 PF04055 Radical SAM superfamily M5E03_06860 PF14489 QueF-like protein M5E03_06865 PF01638 HxlR-like helix-turn-helix M5E03_06880 PF13302 Acetyltransferase (GNAT) domain M5E03_06885 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) M5E03_06895 PF07486 Cell Wall Hydrolase M5E03_06900 PF01943 Polysaccharide biosynthesis protein M5E03_06905 PF00578 AhpC/TSA family M5E03_06915 PF01321 Creatinase/Prolidase N-terminal domain M5E03_06915 PF00557 Metallopeptidase family M24 M5E03_06925 PF00356 Bacterial regulatory proteins, lacI family M5E03_06925 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M5E03_06930 PF03123 CAT RNA binding domain M5E03_06930 PF00874 PRD domain M5E03_06935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5E03_06935 PF00367 phosphotransferase system, EIIB M5E03_06935 PF02378 Phosphotransferase system, EIIC M5E03_06940 PF00381 PTS HPr component phosphorylation site M5E03_06945 PF05524 PEP-utilising enzyme, N-terminal M5E03_06945 PF00391 PEP-utilising enzyme, mobile domain M5E03_06945 PF02896 PEP-utilising enzyme, TIM barrel domain M5E03_06950 PF11132 Transcriptional regulator protein (SplA) M5E03_06960 PF02743 Cache domain M5E03_06960 PF00672 HAMP domain M5E03_06960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_06965 PF00106 short chain dehydrogenase M5E03_06970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase M5E03_06970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M5E03_06975 PF00188 Cysteine-rich secretory protein family M5E03_06980 PF03717 Penicillin-binding Protein dimerisation domain M5E03_06980 PF00905 Penicillin binding protein transpeptidase domain M5E03_06985 PF08447 PAS fold M5E03_06985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_06985 PF00512 His Kinase A (phospho-acceptor) domain M5E03_06985 PF00989 PAS fold M5E03_06990 PF00155 Aminotransferase class I and II M5E03_06995 PF01545 Cation efflux family M5E03_06995 PF16916 Dimerisation domain of Zinc Transporter M5E03_07005 PF06271 RDD family M5E03_07015 PF01584 CheW-like domain M5E03_07015 PF00072 Response regulator receiver domain M5E03_07020 PF14177 YkyB-like protein M5E03_07030 PF12833 Helix-turn-helix domain M5E03_07030 PF02311 AraC-like ligand binding domain M5E03_07035 PF00892 EamA-like transporter family M5E03_07045 PF07690 Major Facilitator Superfamily M5E03_07050 PF01476 LysM domain M5E03_07050 PF03734 L,D-transpeptidase catalytic domain M5E03_07055 PF10518 TAT (twin-arginine translocation) pathway signal sequence M5E03_07055 PF00149 Calcineurin-like phosphoesterase M5E03_07065 PF00563 EAL domain M5E03_07065 PF10388 EAL-domain associated signalling protein domain M5E03_07070 PF05067 Manganese containing catalase M5E03_07075 PF08796 Protein of unknown function (DUF1797) M5E03_07080 PF04308 Ribonuclease H-like M5E03_07085 PF14156 Antirepressor AbbA M5E03_07095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_07095 PF03466 LysR substrate binding domain M5E03_07100 PF00258 Flavodoxin M5E03_07110 PF00258 Flavodoxin M5E03_07115 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal M5E03_07115 PF00132 Bacterial transferase hexapeptide (six repeats) M5E03_07115 PF14602 Hexapeptide repeat of succinyl-transferase M5E03_07120 PF07687 Peptidase dimerisation domain M5E03_07120 PF01546 Peptidase family M20/M25/M40 M5E03_07125 PF03698 Uncharacterised protein family (UPF0180) M5E03_07130 PF00924 Mechanosensitive ion channel M5E03_07135 PF00578 AhpC/TSA family M5E03_07135 PF10417 C-terminal domain of 1-Cys peroxiredoxin M5E03_07140 PF00578 AhpC/TSA family M5E03_07155 PF12804 MobA-like NTP transferase domain M5E03_07160 PF00899 ThiF family M5E03_07165 PF00994 Probable molybdopterin binding domain M5E03_07165 PF03454 MoeA C-terminal region (domain IV) M5E03_07165 PF03453 MoeA N-terminal region (domain I and II) M5E03_07170 PF03205 Molybdopterin guanine dinucleotide synthesis protein B M5E03_07175 PF02391 MoaE protein M5E03_07180 PF02597 ThiS family M5E03_07195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M5E03_07200 PF00005 ABC transporter M5E03_07205 PF12704 MacB-like periplasmic core domain M5E03_07205 PF02687 FtsX-like permease family M5E03_07210 PF08220 DeoR-like helix-turn-helix domain M5E03_07210 PF00455 DeoR C terminal sensor domain M5E03_07215 PF00294 pfkB family carbohydrate kinase M5E03_07220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_07220 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_07225 PF10502 Signal peptidase, peptidase S26 M5E03_07235 PF00005 ABC transporter M5E03_07235 PF12848 ABC transporter M5E03_07240 PF02073 Thermophilic metalloprotease (M29) M5E03_07245 PF17447 Uncharacterized YkpC-like M5E03_07255 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M5E03_07255 PF18277 AbrB C-terminal domain M5E03_07260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_07260 PF00512 His Kinase A (phospho-acceptor) domain M5E03_07260 PF00989 PAS fold M5E03_07265 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like M5E03_07270 PF02080 TrkA-C domain M5E03_07270 PF02254 TrkA-N domain M5E03_07275 PF13382 Adenine deaminase C-terminal domain M5E03_07275 PF01979 Amidohydrolase family M5E03_07280 PF00753 Metallo-beta-lactamase superfamily M5E03_07280 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M5E03_07280 PF17770 Ribonuclease J C-terminal domain M5E03_07285 PF07288 Protein of unknown function (DUF1447) M5E03_07295 PF01327 Polypeptide deformylase M5E03_07310 PF00676 Dehydrogenase E1 component M5E03_07315 PF02779 Transketolase, pyrimidine binding domain M5E03_07315 PF02780 Transketolase, C-terminal domain M5E03_07320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5E03_07320 PF00364 Biotin-requiring enzyme M5E03_07320 PF02817 e3 binding domain M5E03_07325 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_07325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5E03_07335 PF13790 SR1 protein M5E03_07340 PF01276 Orn/Lys/Arg decarboxylase, major domain M5E03_07340 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M5E03_07345 PF05256 Uncharacterised protein family (UPF0223) M5E03_07350 PF06335 Protein of unknown function (DUF1054) M5E03_07360 PF00459 Inositol monophosphatase family M5E03_07375 PF04542 Sigma-70 region 2 M5E03_07375 PF08281 Sigma-70, region 4 M5E03_07380 PF13490 Putative zinc-finger M5E03_07395 PF00679 Elongation factor G C-terminus M5E03_07395 PF14492 Elongation Factor G, domain II M5E03_07395 PF00009 Elongation factor Tu GTP binding domain M5E03_07395 PF03144 Elongation factor Tu domain 2 M5E03_07400 PF14036 YlaH-like protein M5E03_07405 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) M5E03_07410 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M5E03_07415 PF02562 PhoH-like protein M5E03_07415 PF13638 PIN domain M5E03_07425 PF04960 Glutaminase M5E03_07430 PF07408 Protein of unknown function (DUF1507) M5E03_07435 PF01098 Cell cycle protein M5E03_07440 PF02785 Biotin carboxylase C-terminal domain M5E03_07440 PF00289 Biotin carboxylase, N-terminal domain M5E03_07440 PF00364 Biotin-requiring enzyme M5E03_07440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5E03_07440 PF00682 HMGL-like M5E03_07440 PF02436 Conserved carboxylase domain M5E03_07445 PF03441 FAD binding domain of DNA photolyase M5E03_07445 PF00875 DNA photolyase M5E03_07450 PF02628 Cytochrome oxidase assembly protein M5E03_07455 PF01040 UbiA prenyltransferase family M5E03_07460 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M5E03_07460 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M5E03_07460 PF00034 Cytochrome c M5E03_07465 PF00115 Cytochrome C and Quinol oxidase polypeptide I M5E03_07470 PF00510 Cytochrome c oxidase subunit III M5E03_07475 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M5E03_07480 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) M5E03_07485 PF08868 YugN-like family M5E03_07490 PF00571 CBS domain M5E03_07495 PF00188 Cysteine-rich secretory protein family M5E03_07495 PF14504 CAP-associated N-terminal M5E03_07500 PF14071 Putative coat protein M5E03_07505 PF14003 YlbE-like protein M5E03_07515 PF06133 Control of competence regulator ComK, YlbF/YmcA M5E03_07520 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) M5E03_07530 PF01467 Cytidylyltransferase-like M5E03_07535 PF07670 Nucleoside recognition M5E03_07540 PF01734 Patatin-like phospholipase M5E03_07545 PF05362 Lon protease (S16) C-terminal proteolytic domain M5E03_07545 PF13180 PDZ domain M5E03_07550 PF05636 HIGH Nucleotidyl Transferase M5E03_07555 PF02620 Large ribosomal RNA subunit accumulation protein YceD M5E03_07560 PF01783 Ribosomal L32p protein family M5E03_07570 PF00583 Acetyltransferase (GNAT) family M5E03_07575 PF02558 Ketopantoate reductase PanE/ApbA M5E03_07575 PF08546 Ketopantoate reductase PanE/ApbA C terminal M5E03_07580 PF10079 Bacillithiol biosynthesis BshC M5E03_07585 PF02381 MraZ protein, putative antitoxin-like M5E03_07590 PF01795 MraW methylase family M5E03_07600 PF03793 PASTA domain M5E03_07600 PF03717 Penicillin-binding Protein dimerisation domain M5E03_07600 PF00905 Penicillin binding protein transpeptidase domain M5E03_07605 PF03793 PASTA domain M5E03_07605 PF03717 Penicillin-binding Protein dimerisation domain M5E03_07605 PF00905 Penicillin binding protein transpeptidase domain M5E03_07610 PF01225 Mur ligase family, catalytic domain M5E03_07610 PF02875 Mur ligase family, glutamate ligase domain M5E03_07610 PF08245 Mur ligase middle domain M5E03_07615 PF00953 Glycosyl transferase family 4 M5E03_07615 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M5E03_07620 PF02875 Mur ligase family, glutamate ligase domain M5E03_07620 PF08245 Mur ligase middle domain M5E03_07625 PF01098 Cell cycle protein M5E03_07630 PF03033 Glycosyltransferase family 28 N-terminal domain M5E03_07630 PF04101 Glycosyltransferase family 28 C-terminal domain M5E03_07635 PF01565 FAD binding domain M5E03_07635 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M5E03_07640 PF08478 POTRA domain, FtsQ-type M5E03_07645 PF05949 Bacterial protein of unknown function (DUF881) M5E03_07650 PF05949 Bacterial protein of unknown function (DUF881) M5E03_07655 PF06947 Protein of unknown function (DUF1290) M5E03_07660 PF02491 SHS2 domain inserted in FTSA M5E03_07665 PF12327 FtsZ family, C-terminal domain M5E03_07665 PF00091 Tubulin/FtsZ family, GTPase domain M5E03_07670 PF05922 Peptidase inhibitor I9 M5E03_07670 PF00082 Subtilase family M5E03_07675 PF03419 Sporulation factor SpoIIGA M5E03_07680 PF04542 Sigma-70 region 2 M5E03_07680 PF04545 Sigma-70, region 4 M5E03_07685 PF04542 Sigma-70 region 2 M5E03_07685 PF04545 Sigma-70, region 4 M5E03_07685 PF04539 Sigma-70 region 3 M5E03_07690 PF04198 Putative sugar-binding domain M5E03_07705 PF03608 PTS system enzyme II sorbitol-specific factor M5E03_07710 PF07663 Sorbitol phosphotransferase enzyme II C-terminus M5E03_07710 PF03612 Sorbitol phosphotransferase enzyme II N-terminus M5E03_07715 PF03829 PTS system glucitol/sorbitol-specific IIA component M5E03_07720 PF00005 ABC transporter M5E03_07725 PF05239 PRC-barrel domain M5E03_07730 PF02578 Multi-copper polyphenol oxidoreductase laccase M5E03_07735 PF01168 Alanine racemase, N-terminal domain M5E03_07740 PF04472 Cell division protein SepF M5E03_07745 PF02325 YGGT family M5E03_07750 PF01479 S4 domain M5E03_07750 PF17774 Putative RNA-binding domain in YlmH M5E03_07755 PF05103 DivIVA protein M5E03_07760 PF08264 Anticodon-binding domain of tRNA M5E03_07760 PF00133 tRNA synthetases class I (I, L, M and V) M5E03_07765 PF01258 Prokaryotic dksA/traR C4-type zinc finger M5E03_07770 PF01252 Signal peptidase (SPase) II M5E03_07775 PF00849 RNA pseudouridylate synthase M5E03_07775 PF01479 S4 domain M5E03_07780 PF00156 Phosphoribosyl transferase domain M5E03_07785 PF00860 Permease family M5E03_07790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M5E03_07790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M5E03_07795 PF01979 Amidohydrolase family M5E03_07800 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M5E03_07800 PF00117 Glutamine amidotransferase class-I M5E03_07805 PF02142 MGS-like domain M5E03_07805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M5E03_07805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5E03_07810 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B M5E03_07815 PF01180 Dihydroorotate dehydrogenase M5E03_07820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M5E03_07825 PF00156 Phosphoribosyl transferase domain M5E03_07835 PF01507 Phosphoadenosine phosphosulfate reductase family M5E03_07840 PF01384 Phosphate transporter family M5E03_07845 PF01747 ATP-sulfurylase M5E03_07845 PF14306 PUA-like domain M5E03_07855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M5E03_07860 PF01903 CbiX M5E03_07870 PF05670 NFACT protein RNA binding domain M5E03_07875 PF00689 Cation transporting ATPase, C-terminus M5E03_07875 PF00690 Cation transporter/ATPase, N-terminus M5E03_07880 PF03755 YicC-like family, N-terminal region M5E03_07880 PF08340 Domain of unknown function (DUF1732) M5E03_07885 PF04025 Domain of unknown function (DUF370) M5E03_07890 PF00625 Guanylate kinase M5E03_07895 PF01192 RNA polymerase Rpb6 M5E03_07900 PF04127 DNA / pantothenate metabolism flavoprotein M5E03_07900 PF02441 Flavoprotein M5E03_07905 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M5E03_07905 PF04851 Type III restriction enzyme, res subunit M5E03_07905 PF17764 3′ DNA-binding domain (3′BD) M5E03_07905 PF18074 Primosomal protein N C-terminal domain M5E03_07905 PF00271 Helicase conserved C-terminal domain M5E03_07910 PF01327 Polypeptide deformylase M5E03_07915 PF00551 Formyl transferase M5E03_07915 PF02911 Formyl transferase, C-terminal domain M5E03_07920 PF01189 16S rRNA methyltransferase RsmB/F M5E03_07920 PF01029 NusB family M5E03_07925 PF04055 Radical SAM superfamily M5E03_07935 PF03793 PASTA domain M5E03_07935 PF00069 Protein kinase domain M5E03_07940 PF03193 RsgA GTPase M5E03_07940 PF16745 RsgA N-terminal domain M5E03_07945 PF00834 Ribulose-phosphate 3 epimerase family M5E03_07950 PF04263 Thiamin pyrophosphokinase, catalytic domain M5E03_07950 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain M5E03_07955 PF08183 Stage V sporulation protein family M5E03_07960 PF00830 Ribosomal L28 family M5E03_07965 PF03780 Asp23 family, cell envelope-related function M5E03_07970 PF13684 Dihydroxyacetone kinase family M5E03_07970 PF02734 DAK2 domain M5E03_07975 PF01842 ACT domain M5E03_07975 PF03315 Serine dehydratase beta chain M5E03_07980 PF03313 Serine dehydratase alpha chain M5E03_07985 PF00270 DEAD/DEAH box helicase M5E03_07985 PF00271 Helicase conserved C-terminal domain M5E03_07985 PF17191 RecG wedge domain M5E03_07995 PF02504 Fatty acid synthesis protein M5E03_08000 PF00698 Acyl transferase domain M5E03_08010 PF00550 Phosphopantetheine attachment site M5E03_08015 PF00035 Double-stranded RNA binding motif M5E03_08015 PF14622 Ribonuclease-III-like M5E03_08020 PF02463 RecF/RecN/SMC N terminal domain M5E03_08020 PF06470 SMC proteins Flexible Hinge Domain M5E03_08025 PF02881 SRP54-type protein, helical bundle domain M5E03_08025 PF00448 SRP54-type protein, GTPase domain M5E03_08030 PF04297 Putative helix-turn-helix protein, YlxM / p13 like M5E03_08035 PF02978 Signal peptide binding domain M5E03_08035 PF00448 SRP54-type protein, GTPase domain M5E03_08035 PF02881 SRP54-type protein, helical bundle domain M5E03_08040 PF00886 Ribosomal protein S16 M5E03_08050 PF11068 YlqD protein M5E03_08055 PF05239 PRC-barrel domain M5E03_08055 PF01782 RimM N-terminal domain M5E03_08060 PF01746 tRNA (Guanine-1)-methyltransferase M5E03_08065 PF01245 Ribosomal protein L19 M5E03_08070 PF01926 50S ribosome-binding GTPase M5E03_08075 PF01351 Ribonuclease HII M5E03_08085 PF01312 FlhB HrpN YscU SpaS Family M5E03_08090 PF08442 ATP-grasp domain M5E03_08090 PF00549 CoA-ligase M5E03_08095 PF02629 CoA binding domain M5E03_08095 PF00549 CoA-ligase M5E03_08100 PF02481 DNA recombination-mediator protein A M5E03_08105 PF01131 DNA topoisomerase M5E03_08105 PF01751 Toprim domain M5E03_08105 PF01396 Topoisomerase DNA binding C4 zinc finger M5E03_08110 PF01134 Glucose inhibited division protein A M5E03_08115 PF00589 Phage integrase family M5E03_08115 PF02899 Phage integrase, N-terminal SAM-like domain M5E03_08120 PF00227 Proteasome subunit M5E03_08125 PF10431 C-terminal, D2-small domain, of ClpB protein M5E03_08125 PF07724 AAA domain (Cdc48 subfamily) M5E03_08125 PF00004 ATPase family associated with various cellular activities (AAA) M5E03_08130 PF06018 CodY GAF-like domain M5E03_08130 PF08222 CodY helix-turn-helix domain M5E03_08135 PF00460 Flagella basal body rod protein M5E03_08140 PF00460 Flagella basal body rod protein M5E03_08140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5E03_08145 PF02049 Flagellar hook-basal body complex protein FliE M5E03_08150 PF01514 Secretory protein of YscJ/FliF family M5E03_08150 PF08345 Flagellar M-ring protein C-terminal M5E03_08155 PF01706 FliG C-terminal domain M5E03_08155 PF14841 FliG middle domain M5E03_08155 PF14842 FliG N-terminal domain M5E03_08160 PF02108 Flagellar assembly protein FliH M5E03_08165 PF02874 ATP synthase alpha/beta family, beta-barrel domain M5E03_08165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5E03_08165 PF18269 T3SS EscN ATPase C-terminal domain M5E03_08170 PF02050 Flagellar FliJ protein M5E03_08175 PF03448 MgtE intracellular N domain M5E03_08180 PF02120 Flagellar hook-length control protein FliK M5E03_08185 PF03963 Flagellar hook capping protein - N-terminal region M5E03_08190 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5E03_08190 PF00460 Flagella basal body rod protein M5E03_08195 PF06289 Flagellar and Swarming motility proteins M5E03_08200 PF03748 Flagellar basal body-associated protein FliL M5E03_08205 PF02154 Flagellar motor switch protein FliM M5E03_08205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M5E03_08210 PF04509 CheC-like family M5E03_08210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M5E03_08215 PF00072 Response regulator receiver domain M5E03_08220 PF04347 Flagellar biosynthesis protein, FliO M5E03_08225 PF00813 FliP family M5E03_08230 PF01313 Bacterial export proteins, family 3 M5E03_08235 PF01311 Bacterial export proteins, family 1 M5E03_08240 PF01312 FlhB HrpN YscU SpaS Family M5E03_08245 PF00771 FHIPEP family M5E03_08250 PF00448 SRP54-type protein, GTPase domain M5E03_08255 PF10609 NUBPL iron-transfer P-loop NTPase M5E03_08260 PF00072 Response regulator receiver domain M5E03_08260 PF01339 CheB methylesterase M5E03_08265 PF07194 P2 response regulator binding domain M5E03_08265 PF02895 Signal transducing histidine kinase, homodimeric domain M5E03_08265 PF01584 CheW-like domain M5E03_08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_08265 PF01627 Hpt domain M5E03_08270 PF01584 CheW-like domain M5E03_08275 PF04509 CheC-like family M5E03_08280 PF03975 CheD chemotactic sensory transduction M5E03_08285 PF04542 Sigma-70 region 2 M5E03_08285 PF04539 Sigma-70 region 3 M5E03_08285 PF04545 Sigma-70, region 4 M5E03_08295 PF00318 Ribosomal protein S2 M5E03_08300 PF00889 Elongation factor TS M5E03_08305 PF00696 Amino acid kinase family M5E03_08310 PF01765 Ribosome recycling factor M5E03_08315 PF01255 Putative undecaprenyl diphosphate synthase M5E03_08325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M5E03_08325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M5E03_08325 PF13288 DXP reductoisomerase C-terminal domain M5E03_08330 PF17820 PDZ domain M5E03_08330 PF02163 Peptidase family M50 M5E03_08335 PF03129 Anticodon binding domain M5E03_08335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M5E03_08335 PF04073 Aminoacyl-tRNA editing domain M5E03_08340 PF14480 DNA polymerase III polC-type N-terminus I M5E03_08340 PF11490 DNA polymerase III polC-type N-terminus II M5E03_08340 PF14579 Helix-hairpin-helix motif M5E03_08340 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M5E03_08340 PF07733 Bacterial DNA polymerase III alpha NTPase domain M5E03_08340 PF00929 Exonuclease M5E03_08340 PF02811 PHP domain M5E03_08345 PF00942 Cellulose binding domain M5E03_08345 PF00759 Glycosyl hydrolase family 9 M5E03_08350 PF00942 Cellulose binding domain M5E03_08350 PF02011 Glycosyl hydrolase family 48 M5E03_08350 PF00759 Glycosyl hydrolase family 9 M5E03_08355 PF00331 Glycosyl hydrolase family 10 M5E03_08355 PF12791 Anti-sigma factor N-terminus M5E03_08375 PF00005 ABC transporter M5E03_08410 PF00881 Nitroreductase family M5E03_08420 PF08241 Methyltransferase domain M5E03_08425 PF17384 RimP C-terminal SH3 domain M5E03_08425 PF02576 RimP N-terminal domain M5E03_08430 PF08529 NusA N-terminal domain M5E03_08430 PF13184 NusA-like KH domain M5E03_08430 PF00575 S1 RNA binding domain M5E03_08435 PF04296 Protein of unknown function (DUF448) M5E03_08440 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family M5E03_08445 PF00009 Elongation factor Tu GTP binding domain M5E03_08445 PF11987 Translation-initiation factor 2 M5E03_08445 PF04760 Translation initiation factor IF-2, N-terminal region M5E03_08450 PF04456 Protein of unknown function (DUF503) M5E03_08455 PF02033 Ribosome-binding factor A M5E03_08460 PF01509 TruB family pseudouridylate synthase (N terminal domain) M5E03_08460 PF16198 tRNA pseudouridylate synthase B C-terminal domain M5E03_08465 PF06574 FAD synthetase M5E03_08465 PF01687 Riboflavin kinase M5E03_08470 PF00312 Ribosomal protein S15 M5E03_08475 PF03725 3' exoribonuclease family, domain 2 M5E03_08475 PF01138 3' exoribonuclease family, domain 1 M5E03_08475 PF00575 S1 RNA binding domain M5E03_08475 PF00013 KH domain M5E03_08475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M5E03_08480 PF01522 Polysaccharide deacetylase M5E03_08485 PF00675 Insulinase (Peptidase family M16) M5E03_08485 PF05193 Peptidase M16 inactive domain M5E03_08495 PF05239 PRC-barrel domain M5E03_08500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M5E03_08500 PF16924 Dipicolinate synthase subunit A N-terminal domain M5E03_08505 PF02441 Flavoprotein M5E03_08510 PF01118 Semialdehyde dehydrogenase, NAD binding domain M5E03_08510 PF02774 Semialdehyde dehydrogenase, dimerisation domain M5E03_08515 PF00696 Amino acid kinase family M5E03_08515 PF13840 ACT domain M5E03_08520 PF00701 Dihydrodipicolinate synthetase family M5E03_08525 PF00753 Metallo-beta-lactamase superfamily M5E03_08525 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain M5E03_08525 PF17770 Ribonuclease J C-terminal domain M5E03_08530 PF00574 Clp protease M5E03_08535 PF14035 YlzJ-like protein M5E03_08540 PF09397 Ftsk gamma domain M5E03_08540 PF17854 FtsK alpha domain M5E03_08540 PF01580 FtsK/SpoIIIE family M5E03_08545 PF07702 UTRA domain M5E03_08545 PF00392 Bacterial regulatory proteins, gntR family M5E03_08550 PF07690 Major Facilitator Superfamily M5E03_08555 PF03176 MMPL family M5E03_08560 PF05193 Peptidase M16 inactive domain M5E03_08565 PF00675 Insulinase (Peptidase family M16) M5E03_08565 PF05193 Peptidase M16 inactive domain M5E03_08575 PF03176 MMPL family M5E03_08585 PF11588 Protein of unknown function (DUF3243) M5E03_08590 PF11868 Protein of unknown function (DUF3388) M5E03_08595 PF13464 Domain of unknown function (DUF4115) M5E03_08600 PF01066 CDP-alcohol phosphatidyltransferase M5E03_08605 PF00994 Probable molybdopterin binding domain M5E03_08605 PF18146 Damage-inducible protein CinA KH domain M5E03_08605 PF02464 Competence-damaged protein M5E03_08610 PF00154 recA bacterial DNA recombination protein M5E03_08615 PF01966 HD domain M5E03_08615 PF00013 KH domain M5E03_08615 PF12072 Domain of unknown function (DUF3552) M5E03_08620 PF13277 YmdB-like protein M5E03_08625 PF04232 Stage V sporulation protein S (SpoVS) M5E03_08630 PF00873 AcrB/AcrD/AcrF family M5E03_08635 PF08240 Alcohol dehydrogenase GroES-like domain M5E03_08635 PF00107 Zinc-binding dehydrogenase M5E03_08640 PF00155 Aminotransferase class I and II M5E03_08645 PF00919 Uncharacterized protein family UPF0004 M5E03_08645 PF01938 TRAM domain M5E03_08645 PF04055 Radical SAM superfamily M5E03_08650 PF06133 Control of competence regulator ComK, YlbF/YmcA M5E03_08655 PF10628 Outer spore coat protein E (CotE) M5E03_08660 PF00488 MutS domain V M5E03_08660 PF05192 MutS domain III M5E03_08660 PF01624 MutS domain I M5E03_08660 PF05190 MutS family domain IV M5E03_08660 PF05188 MutS domain II M5E03_08665 PF08676 MutL C terminal dimerisation domain M5E03_08665 PF01119 DNA mismatch repair protein, C-terminal domain M5E03_08670 PF17735 Biofilm surface layer A M5E03_08680 PF02559 CarD-like/TRCF domain M5E03_08685 PF05908 Poly-gamma-glutamate hydrolase M5E03_08690 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_08695 PF00082 Subtilase family M5E03_08700 PF05908 Poly-gamma-glutamate hydrolase M5E03_08705 PF02566 OsmC-like protein M5E03_08710 PF00893 Small Multidrug Resistance protein M5E03_08715 PF00893 Small Multidrug Resistance protein M5E03_08735 PF12788 YmaF family M5E03_08745 PF17209 Hfq protein M5E03_08760 PF07972 NrdI Flavodoxin like M5E03_08765 PF00317 Ribonucleotide reductase, all-alpha domain M5E03_08765 PF08343 Ribonucleotide reductase N-terminal M5E03_08765 PF02867 Ribonucleotide reductase, barrel domain M5E03_08770 PF00268 Ribonucleotide reductase, small chain M5E03_08780 PF01520 N-acetylmuramoyl-L-alanine amidase M5E03_08780 PF05036 Sporulation related domain M5E03_08785 PF00004 ATPase family associated with various cellular activities (AAA) M5E03_08785 PF17866 AAA lid domain M5E03_08790 PF16360 GTP-binding GTPase Middle Region M5E03_08790 PF13167 GTP-binding GTPase N-terminal M5E03_08790 PF01926 50S ribosome-binding GTPase M5E03_08795 PF06838 Methionine gamma-lyase M5E03_08800 PF13411 MerR HTH family regulatory protein M5E03_08805 PF00120 Glutamine synthetase, catalytic domain M5E03_08805 PF03951 Glutamine synthetase, beta-Grasp domain M5E03_08830 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_08835 PF04740 LXG domain of WXG superfamily M5E03_08840 PF04634 Protein of unknown function, DUF600 M5E03_08850 PF01569 PAP2 superfamily M5E03_08855 PF08818 Domain of unknown function (DU1801) M5E03_08860 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_08865 PF06912 Protein of unknown function (DUF1275) M5E03_08870 PF01068 ATP dependent DNA ligase domain M5E03_08875 PF02735 Ku70/Ku80 beta-barrel domain M5E03_08880 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) M5E03_08890 PF02082 Transcriptional regulator M5E03_08895 PF05368 NmrA-like family M5E03_08900 PF02754 Cysteine-rich domain M5E03_08905 PF11870 Domain of unknown function (DUF3390) M5E03_08905 PF02589 LUD domain M5E03_08905 PF13183 4Fe-4S dicluster domain M5E03_08910 PF02589 LUD domain M5E03_08930 PF04239 Protein of unknown function (DUF421) M5E03_08935 PF16295 Tetracyclin repressor-like, C-terminal domain M5E03_08935 PF00440 Bacterial regulatory proteins, tetR family M5E03_08940 PF00667 FAD binding domain M5E03_08940 PF00258 Flavodoxin M5E03_08940 PF00175 Oxidoreductase NAD-binding domain M5E03_08940 PF00067 Cytochrome P450 M5E03_08945 PF00089 Trypsin M5E03_08950 PF14040 Deoxyribonuclease NucA/NucB M5E03_08955 PF01740 STAS domain M5E03_08960 PF16800 IseA DL-endopeptidase inhibitor M5E03_08970 PF00717 Peptidase S24-like M5E03_08970 PF01726 LexA DNA binding domain M5E03_08975 PF01476 LysM domain M5E03_08980 PF00239 Resolvase, N terminal domain M5E03_08985 PF05979 Bacterial protein of unknown function (DUF896) M5E03_08990 PF02779 Transketolase, pyrimidine binding domain M5E03_08990 PF02780 Transketolase, C-terminal domain M5E03_08990 PF00456 Transketolase, thiamine diphosphate binding domain M5E03_08995 PF10747 Sporulation inhibitor of replication protein SirA M5E03_09000 PF03672 Uncharacterised protein family (UPF0154) M5E03_09005 PF09388 Spo0E like sporulation regulatory protein M5E03_09010 PF02683 Cytochrome C biogenesis protein transmembrane region M5E03_09015 PF07301 Protein of unknown function (DUF1453) M5E03_09020 PF11084 Protein of unknown function (DUF2621) M5E03_09030 PF08179 Small acid-soluble spore protein P family M5E03_09040 PF00330 Aconitase family (aconitate hydratase) M5E03_09040 PF00694 Aconitase C-terminal domain M5E03_09045 PF00578 AhpC/TSA family M5E03_09050 PF13040 Fur-regulated basic protein B M5E03_09055 PF08177 Small acid-soluble spore protein N family M5E03_09065 PF03061 Thioesterase superfamily M5E03_09075 PF01521 Iron-sulphur cluster biosynthesis M5E03_09080 PF02660 Glycerol-3-phosphate acyltransferase M5E03_09085 PF13380 CoA binding domain M5E03_09090 PF00204 DNA gyrase B M5E03_09090 PF00986 DNA gyrase B subunit, carboxyl terminus M5E03_09090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_09090 PF01751 Toprim domain M5E03_09095 PF03989 DNA gyrase C-terminal domain, beta-propeller M5E03_09095 PF00521 DNA gyrase/topoisomerase IV, subunit A M5E03_09105 PF07690 Major Facilitator Superfamily M5E03_09110 PF14602 Hexapeptide repeat of succinyl-transferase M5E03_09110 PF12464 Maltose acetyltransferase M5E03_09115 PF02525 Flavodoxin-like fold M5E03_09120 PF01638 HxlR-like helix-turn-helix M5E03_09130 PF00291 Pyridoxal-phosphate dependent enzyme M5E03_09135 PF01042 Endoribonuclease L-PSP M5E03_09155 PF00795 Carbon-nitrogen hydrolase M5E03_09160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_09160 PF03466 LysR substrate binding domain M5E03_09165 PF03600 Citrate transporter M5E03_09170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M5E03_09170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M5E03_09175 PF02803 Thiolase, C-terminal domain M5E03_09175 PF00108 Thiolase, N-terminal domain M5E03_09180 PF00378 Enoyl-CoA hydratase/isomerase M5E03_09185 PF00378 Enoyl-CoA hydratase/isomerase M5E03_09190 PF00378 Enoyl-CoA hydratase/isomerase M5E03_09195 PF02515 CoA-transferase family III M5E03_09220 PF07859 alpha/beta hydrolase fold M5E03_09220 PF00934 PE family M5E03_09225 PF13411 MerR HTH family regulatory protein M5E03_09230 PF00232 Glycosyl hydrolase family 1 M5E03_09235 PF00367 phosphotransferase system, EIIB M5E03_09235 PF02378 Phosphotransferase system, EIIC M5E03_09235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5E03_09240 PF00874 PRD domain M5E03_09240 PF03123 CAT RNA binding domain M5E03_09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_09250 PF00512 His Kinase A (phospho-acceptor) domain M5E03_09255 PF00486 Transcriptional regulatory protein, C terminal M5E03_09255 PF00072 Response regulator receiver domain M5E03_09260 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain M5E03_09260 PF17189 Glycosyl hydrolase family 30 beta sandwich domain M5E03_09265 PF03422 Carbohydrate binding module (family 6) M5E03_09265 PF04616 Glycosyl hydrolases family 43 M5E03_09270 PF00171 Aldehyde dehydrogenase family M5E03_09275 PF02056 Family 4 glycosyl hydrolase M5E03_09275 PF11975 Family 4 glycosyl hydrolase C-terminal domain M5E03_09280 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_09285 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_09290 PF01547 Bacterial extracellular solute-binding protein M5E03_09295 PF00356 Bacterial regulatory proteins, lacI family M5E03_09300 PF00834 Ribulose-phosphate 3 epimerase family M5E03_09315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_09355 PF04740 LXG domain of WXG superfamily M5E03_09355 PF14449 Pre-toxin TG M5E03_09355 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues M5E03_09360 PF01047 MarR family M5E03_09365 PF07690 Major Facilitator Superfamily M5E03_09370 PF01116 Fructose-bisphosphate aldolase class-II M5E03_09375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_09375 PF02378 Phosphotransferase system, EIIC M5E03_09375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_09380 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_09380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_09385 PF00294 pfkB family carbohydrate kinase M5E03_09390 PF01380 SIS domain M5E03_09390 PF01418 Helix-turn-helix domain, rpiR family M5E03_09395 PF13091 PLD-like domain M5E03_09415 PF00171 Aldehyde dehydrogenase family M5E03_09420 PF11518 Protein of unknown function (DUF3221) M5E03_09425 PF00667 FAD binding domain M5E03_09425 PF00258 Flavodoxin M5E03_09425 PF00175 Oxidoreductase NAD-binding domain M5E03_09430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M5E03_09430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M5E03_09435 PF16177 Acetyl-coenzyme A synthetase N-terminus M5E03_09435 PF00501 AMP-binding enzyme M5E03_09435 PF13193 AMP-binding enzyme C-terminal domain M5E03_09440 PF01039 Carboxyl transferase domain M5E03_09445 PF00378 Enoyl-CoA hydratase/isomerase M5E03_09450 PF00682 HMGL-like M5E03_09455 PF00364 Biotin-requiring enzyme M5E03_09460 PF02785 Biotin carboxylase C-terminal domain M5E03_09460 PF00289 Biotin carboxylase, N-terminal domain M5E03_09460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5E03_09465 PF13193 AMP-binding enzyme C-terminal domain M5E03_09465 PF00501 AMP-binding enzyme M5E03_09470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5E03_09470 PF02770 Acyl-CoA dehydrogenase, middle domain M5E03_09470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5E03_09475 PF02638 Glycosyl hydrolase-like 10 M5E03_09480 PF13350 Tyrosine phosphatase family M5E03_09485 PF00455 DeoR C terminal sensor domain M5E03_09485 PF08220 DeoR-like helix-turn-helix domain M5E03_09495 PF05651 Putative sugar diacid recognition M5E03_09495 PF17853 GGDEF-like domain M5E03_09495 PF13556 PucR C-terminal helix-turn-helix domain M5E03_09500 PF01565 FAD binding domain M5E03_09500 PF02913 FAD linked oxidases, C-terminal domain M5E03_09505 PF02754 Cysteine-rich domain M5E03_09505 PF13183 4Fe-4S dicluster domain M5E03_09510 PF03323 Bacillus/Clostridium GerA spore germination protein M5E03_09515 PF03845 Spore germination protein M5E03_09535 PF12728 Helix-turn-helix domain M5E03_09540 PF09335 SNARE associated Golgi protein M5E03_09545 PF02602 Uroporphyrinogen-III synthase HemD M5E03_09555 PF00296 Luciferase-like monooxygenase M5E03_09570 PF01554 MatE M5E03_09575 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M5E03_09580 PF01095 Pectinesterase M5E03_09585 PF04239 Protein of unknown function (DUF421) M5E03_09590 PF00355 Rieske [2Fe-2S] domain M5E03_09595 PF04324 BFD-like [2Fe-2S] binding domain M5E03_09595 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M5E03_09595 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M5E03_09595 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_09595 PF18267 Rubredoxin NAD+ reductase C-terminal domain M5E03_09600 PF00384 Molybdopterin oxidoreductase M5E03_09600 PF01568 Molydopterin dinucleotide binding domain M5E03_09600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5E03_09605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M5E03_09605 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_09605 PF18267 Rubredoxin NAD+ reductase C-terminal domain M5E03_09605 PF04324 BFD-like [2Fe-2S] binding domain M5E03_09610 PF07690 Major Facilitator Superfamily M5E03_09615 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M5E03_09615 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_09620 PF01645 Conserved region in glutamate synthase M5E03_09620 PF00310 Glutamine amidotransferases class-II M5E03_09620 PF04898 Glutamate synthase central domain M5E03_09620 PF01493 GXGXG motif M5E03_09625 PF03466 LysR substrate binding domain M5E03_09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_09630 PF00005 ABC transporter M5E03_09630 PF00664 ABC transporter transmembrane region M5E03_09635 PF00005 ABC transporter M5E03_09635 PF00664 ABC transporter transmembrane region M5E03_09640 PF06445 GyrI-like small molecule binding domain M5E03_09640 PF13411 MerR HTH family regulatory protein M5E03_09645 PF00583 Acetyltransferase (GNAT) family M5E03_09650 PF00171 Aldehyde dehydrogenase family M5E03_09655 PF00696 Amino acid kinase family M5E03_09655 PF01472 PUA domain M5E03_09660 PF14748 Pyrroline-5-carboxylate reductase dimerisation M5E03_09660 PF03807 NADP oxidoreductase coenzyme F420-dependent M5E03_09665 PF00067 Cytochrome P450 M5E03_09670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M5E03_09670 PF01568 Molydopterin dinucleotide binding domain M5E03_09670 PF00384 Molybdopterin oxidoreductase M5E03_09675 PF00457 Glycosyl hydrolases family 11 M5E03_09680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M5E03_09680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M5E03_09685 PF01261 Xylose isomerase-like TIM barrel M5E03_09690 PF00480 ROK family M5E03_09695 PF04616 Glycosyl hydrolases family 43 M5E03_09695 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain M5E03_09705 PF01588 Putative tRNA binding domain M5E03_09715 PF14158 YndJ-like protein M5E03_09720 PF13761 Domain of unknown function (DUF4166) M5E03_09730 PF13305 Tetracyclin repressor-like, C-terminal domain M5E03_09730 PF00440 Bacterial regulatory proteins, tetR family M5E03_09735 PF00753 Metallo-beta-lactamase superfamily M5E03_09740 PF06445 GyrI-like small molecule binding domain M5E03_09745 PF08279 HTH domain M5E03_09745 PF13280 WYL domain M5E03_09755 PF01022 Bacterial regulatory protein, arsR family M5E03_09760 PF00324 Amino acid permease M5E03_09775 PF03972 MmgE/PrpD family M5E03_09780 PF00285 Citrate synthase, C-terminal domain M5E03_09785 PF04238 Protein of unknown function (DUF420) M5E03_09795 PF01476 LysM domain M5E03_09795 PF06725 3D domain M5E03_09800 PF00270 DEAD/DEAH box helicase M5E03_09800 PF16124 RecQ zinc-binding M5E03_09800 PF09382 RQC domain M5E03_09800 PF00271 Helicase conserved C-terminal domain M5E03_09800 PF00570 HRDC domain M5E03_09810 PF01258 Prokaryotic dksA/traR C4-type zinc finger M5E03_09820 PF08000 Bacterial PH domain M5E03_09835 PF00171 Aldehyde dehydrogenase family M5E03_09840 PF13243 Squalene-hopene cyclase C-terminal domain M5E03_09840 PF13249 Squalene-hopene cyclase N-terminal domain M5E03_09845 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M5E03_09845 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M5E03_09850 PF01758 Sodium Bile acid symporter family M5E03_09855 PF02817 e3 binding domain M5E03_09855 PF00364 Biotin-requiring enzyme M5E03_09855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5E03_09860 PF00676 Dehydrogenase E1 component M5E03_09860 PF16870 2-oxoglutarate dehydrogenase C-terminal M5E03_09860 PF02779 Transketolase, pyrimidine binding domain M5E03_09860 PF16078 2-oxoglutarate dehydrogenase N-terminus M5E03_09865 PF00092 von Willebrand factor type A domain M5E03_09870 PF07728 AAA domain (dynein-related subfamily) M5E03_09875 PF13627 Prokaryotic lipoprotein-attachment site M5E03_09875 PF00080 Copper/zinc superoxide dismutase (SODC) M5E03_09880 PF01476 LysM domain M5E03_09880 PF00877 NlpC/P60 family M5E03_09885 PF02457 DisA bacterial checkpoint controller nucleotide-binding M5E03_09885 PF10372 Bacterial membrane-spanning protein N-terminus M5E03_09890 PF01554 MatE M5E03_09895 PF02585 GlcNAc-PI de-N-acetylase M5E03_09900 PF08830 Protein of unknown function (DUF1806) M5E03_09910 PF00892 EamA-like transporter family M5E03_09925 PF01638 HxlR-like helix-turn-helix M5E03_09930 PF00881 Nitroreductase family M5E03_09935 PF11755 Protein of unknown function (DUF3311) M5E03_09940 PF00474 Sodium:solute symporter family M5E03_09945 PF17820 PDZ domain M5E03_09945 PF03572 Peptidase family S41 M5E03_09945 PF01471 Putative peptidoglycan binding domain M5E03_09950 PF08241 Methyltransferase domain M5E03_09960 PF02557 D-alanyl-D-alanine carboxypeptidase M5E03_09965 PF01048 Phosphorylase superfamily M5E03_09970 PF14191 YodL-like M5E03_09975 PF01569 PAP2 superfamily M5E03_09980 PF14162 YozD-like protein M5E03_09990 PF06855 YozE SAM-like fold M5E03_09995 PF14122 YokU-like protein, putative antitoxin M5E03_10000 PF12544 Lysine-2,3-aminomutase M5E03_10005 PF00158 Sigma-54 interaction domain M5E03_10005 PF02954 Bacterial regulatory protein, Fis family M5E03_10005 PF13426 PAS domain M5E03_10010 PF00535 Glycosyl transferase family 2 M5E03_10025 PF12996 DUF based on E. rectale Gene description (DUF3880) M5E03_10035 PF02719 Polysaccharide biosynthesis protein M5E03_10040 PF01641 SelR domain M5E03_10045 PF01625 Peptide methionine sulfoxide reductase M5E03_10050 PF01047 MarR family M5E03_10065 PF17431 Uncharacterized YmpT-like M5E03_10070 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) M5E03_10075 PF13472 GDSL-like Lipase/Acylhydrolase family M5E03_10080 PF02630 SCO1/SenC M5E03_10085 PF02645 Uncharacterised protein, DegV family COG1307 M5E03_10090 PF10751 Protein of unknown function (DUF2535) M5E03_10095 PF00291 Pyridoxal-phosphate dependent enzyme M5E03_10095 PF00585 C-terminal regulatory domain of Threonine dehydratase M5E03_10100 PF00158 Sigma-54 interaction domain M5E03_10100 PF08461 Ribonuclease R winged-helix domain M5E03_10105 PF03006 Haemolysin-III related M5E03_10115 PF00186 Dihydrofolate reductase M5E03_10120 PF00303 Thymidylate synthase M5E03_10125 PF04608 Phosphatidylglycerophosphatase A M5E03_10130 PF14005 YpjP-like protein M5E03_10135 PF04445 Putative SAM-dependent methyltransferase M5E03_10140 PF06491 Disulphide isomerase M5E03_10145 PF00920 Dehydratase family M5E03_10150 PF08712 Scaffold protein Nfu/NifU N terminal M5E03_10150 PF13769 Virulence factor M5E03_10155 PF01966 HD domain M5E03_10160 PF00255 Glutathione peroxidase M5E03_10165 PF01268 Formate--tetrahydrofolate ligase M5E03_10170 PF04204 Homoserine O-succinyltransferase M5E03_10175 PF00534 Glycosyl transferases group 1 M5E03_10175 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase M5E03_10185 PF00313 'Cold-shock' DNA-binding domain M5E03_10195 PF10782 Zinc-finger M5E03_10200 PF13456 Reverse transcriptase-like M5E03_10205 PF02592 Putative vitamin uptake transporter M5E03_10210 PF13456 Reverse transcriptase-like M5E03_10220 PF01367 5'-3' exonuclease, C-terminal SAM fold M5E03_10220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M5E03_10225 PF10752 Protein of unknown function (DUF2533) M5E03_10230 PF00350 Dynamin family M5E03_10235 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family M5E03_10240 PF02797 Chalcone and stilbene synthases, C-terminal domain M5E03_10240 PF00195 Chalcone and stilbene synthases, N-terminal domain M5E03_10245 PF01522 Polysaccharide deacetylase M5E03_10250 PF00860 Permease family M5E03_10260 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M5E03_10265 PF13307 Helicase C-terminal domain M5E03_10275 PF01170 Putative RNA methylase family UPF0020 M5E03_10275 PF02926 THUMP domain M5E03_10285 PF05103 DivIVA protein M5E03_10290 PF06908 YspA SLOG family M5E03_10295 PF11122 Inner spore coat protein D M5E03_10300 PF13482 RNase_H superfamily M5E03_10305 PF09369 Domain of unknown function (DUF1998) M5E03_10305 PF00271 Helicase conserved C-terminal domain M5E03_10305 PF00270 DEAD/DEAH box helicase M5E03_10310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M5E03_10315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5E03_10325 PF14179 YppG-like protein M5E03_10330 PF08807 Bacterial domain of unknown function (DUF1798) M5E03_10345 PF10720 Protein of unknown function (DUF2515) M5E03_10350 PF03838 Recombination protein U M5E03_10355 PF00912 Transglycosylase M5E03_10355 PF00905 Penicillin binding protein transpeptidase domain M5E03_10365 PF10576 Iron-sulfur binding domain of endonuclease III M5E03_10365 PF00633 Helix-hairpin-helix motif M5E03_10365 PF00730 HhH-GPD superfamily base excision DNA repair protein M5E03_10370 PF07261 Replication initiation and membrane attachment M5E03_10375 PF00152 tRNA synthetases class II (D, K and N) M5E03_10375 PF01336 OB-fold nucleic acid binding domain M5E03_10380 PF17881 Domain of unknown function (DUF5590) M5E03_10380 PF03413 Peptidase propeptide and YPEB domain M5E03_10385 PF14084 Protein of unknown function (DUF4264) M5E03_10390 PF13307 Helicase C-terminal domain M5E03_10390 PF04851 Type III restriction enzyme, res subunit M5E03_10390 PF00929 Exonuclease M5E03_10395 PF02261 Aspartate decarboxylase M5E03_10400 PF02569 Pantoate-beta-alanine ligase M5E03_10405 PF02548 Ketopantoate hydroxymethyltransferase M5E03_10415 PF13735 tRNA nucleotidyltransferase domain 2 putative M5E03_10415 PF01743 Poly A polymerase head domain M5E03_10415 PF12627 Probable RNA and SrmB- binding site of polymerase A M5E03_10420 PF00534 Glycosyl transferases group 1 M5E03_10420 PF13439 Glycosyltransferase Family 4 M5E03_10425 PF02585 GlcNAc-PI de-N-acetylase M5E03_10430 PF02142 MGS-like domain M5E03_10435 PF05173 Dihydrodipicolinate reductase, C-terminus M5E03_10435 PF01113 Dihydrodipicolinate reductase, N-terminus M5E03_10440 PF03819 MazG nucleotide pyrophosphohydrolase domain M5E03_10445 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M5E03_10445 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M5E03_10450 PF09577 Sporulation protein YpjB (SpoYpjB) M5E03_10455 PF07187 Protein of unknown function (DUF1405) M5E03_10460 PF00032 Cytochrome b(C-terminal)/b6/petD M5E03_10460 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M5E03_10465 PF00033 Cytochrome b/b6/petB M5E03_10470 PF00355 Rieske [2Fe-2S] domain M5E03_10475 PF10673 Protein of unknown function (DUF2487) M5E03_10480 PF08864 UPF0302 domain M5E03_10480 PF08858 IDEAL domain M5E03_10490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M5E03_10495 PF01842 ACT domain M5E03_10495 PF02153 Prephenate dehydrogenase M5E03_10500 PF00155 Aminotransferase class I and II M5E03_10505 PF00290 Tryptophan synthase alpha chain M5E03_10510 PF00291 Pyridoxal-phosphate dependent enzyme M5E03_10515 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M5E03_10520 PF00218 Indole-3-glycerol phosphate synthase M5E03_10525 PF00591 Glycosyl transferase family, a/b domain M5E03_10525 PF02885 Glycosyl transferase family, helical bundle domain M5E03_10530 PF00425 chorismate binding enzyme M5E03_10530 PF04715 Anthranilate synthase component I, N terminal region M5E03_10535 PF07736 Chorismate mutase type I M5E03_10540 PF01761 3-dehydroquinate synthase M5E03_10545 PF01264 Chorismate synthase M5E03_10550 PF01739 CheR methyltransferase, SAM binding domain M5E03_10550 PF03705 CheR methyltransferase, all-alpha domain M5E03_10555 PF00334 Nucleoside diphosphate kinase M5E03_10560 PF00348 Polyprenyl synthetase M5E03_10565 PF01209 ubiE/COQ5 methyltransferase family M5E03_10570 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 M5E03_10575 PF02081 Tryptophan RNA-binding attenuator protein M5E03_10580 PF01227 GTP cyclohydrolase I M5E03_10585 PF00216 Bacterial DNA-binding protein M5E03_10590 PF09547 Stage IV sporulation protein A (spore_IV_A) M5E03_10600 PF10966 Protein of unknown function (DUF2768) M5E03_10605 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M5E03_10605 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M5E03_10610 PF01926 50S ribosome-binding GTPase M5E03_10610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M5E03_10620 PF14045 YIEGIA protein M5E03_10630 PF14140 YpzI-like protein M5E03_10635 PF01070 FMN-dependent dehydrogenase M5E03_10640 PF00575 S1 RNA binding domain M5E03_10645 PF02224 Cytidylate kinase M5E03_10650 PF17313 Family of unknown function (DUF5359) M5E03_10655 PF12945 Flagellar protein YcgR M5E03_10655 PF07238 PilZ domain M5E03_10660 PF03413 Peptidase propeptide and YPEB domain M5E03_10660 PF14620 YpeB sporulation M5E03_10665 PF01471 Putative peptidoglycan binding domain M5E03_10665 PF07486 Cell Wall Hydrolase M5E03_10670 PF13367 PrsW family intramembrane metalloprotease M5E03_10680 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M5E03_10680 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M5E03_10685 PF05389 Negative regulator of genetic competence (MecA) M5E03_10690 PF00149 Calcineurin-like phosphoesterase M5E03_10695 PF10864 Protein of unknown function (DUF2663) M5E03_10700 PF01476 LysM domain M5E03_10705 PF02517 CPBP intramembrane metalloprotease M5E03_10710 PF00270 DEAD/DEAH box helicase M5E03_10710 PF00271 Helicase conserved C-terminal domain M5E03_10715 PF14493 Helix-turn-helix domain M5E03_10725 PF12822 ECF transporter, substrate-specific component M5E03_10730 PF01842 ACT domain M5E03_10730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M5E03_10730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5E03_10735 PF01476 LysM domain M5E03_10735 PF00877 NlpC/P60 family M5E03_10745 PF04542 Sigma-70 region 2 M5E03_10745 PF08281 Sigma-70, region 4 M5E03_10750 PF00672 HAMP domain M5E03_10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_10750 PF18698 Histidine kinase sensor domain M5E03_10750 PF00512 His Kinase A (phospho-acceptor) domain M5E03_10750 PF00989 PAS fold M5E03_10755 PF00072 Response regulator receiver domain M5E03_10755 PF00486 Transcriptional regulatory protein, C terminal M5E03_10760 PF01578 Cytochrome C assembly protein M5E03_10765 PF05140 ResB-like family M5E03_10770 PF00578 AhpC/TSA family M5E03_10775 PF00849 RNA pseudouridylate synthase M5E03_10775 PF01479 S4 domain M5E03_10780 PF07670 Nucleoside recognition M5E03_10785 PF07670 Nucleoside recognition M5E03_10790 PF00768 D-alanyl-D-alanine carboxypeptidase M5E03_10790 PF07943 Penicillin-binding protein 5, C-terminal domain M5E03_10795 PF13047 Protein of unknown function (DUF3907) M5E03_10800 PF04079 Segregation and condensation complex subunit ScpB M5E03_10805 PF02616 Segregation and condensation protein ScpA M5E03_10810 PF09680 Family of unknown function M5E03_10815 PF03745 Domain of unknown function (DUF309) M5E03_10820 PF00583 Acetyltransferase (GNAT) family M5E03_10825 PF00885 6,7-dimethyl-8-ribityllumazine synthase M5E03_10835 PF00677 Lumazine binding domain M5E03_10855 PF07690 Major Facilitator Superfamily M5E03_10860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M5E03_10865 PF06207 Protein of unknown function (DUF1002) M5E03_10870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M5E03_10870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M5E03_10875 PF03323 Bacillus/Clostridium GerA spore germination protein M5E03_10880 PF14097 Stage V sporulation protein AE1 M5E03_10885 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M5E03_10890 PF07451 Stage V sporulation protein AD (SpoVAD) M5E03_10895 PF03862 SpoVAC/SpoVAEB sporulation membrane protein M5E03_10900 PF13782 Stage V sporulation protein AB M5E03_10905 PF12164 Stage V sporulation protein AA M5E03_10910 PF04542 Sigma-70 region 2 M5E03_10910 PF04539 Sigma-70 region 3 M5E03_10910 PF04545 Sigma-70, region 4 M5E03_10915 PF13581 Histidine kinase-like ATPase domain M5E03_10920 PF01740 STAS domain M5E03_10925 PF07943 Penicillin-binding protein 5, C-terminal domain M5E03_10925 PF00768 D-alanyl-D-alanine carboxypeptidase M5E03_10930 PF01048 Phosphorylase superfamily M5E03_10935 PF01676 Metalloenzyme superfamily M5E03_10940 PF00589 Phage integrase family M5E03_10940 PF02899 Phage integrase, N-terminal SAM-like domain M5E03_10945 PF14004 Protein of unknown function (DUF4227) M5E03_10950 PF01475 Ferric uptake regulator family M5E03_10955 PF01944 Stage II sporulation protein M M5E03_10960 PF05922 Peptidase inhibitor I9 M5E03_10960 PF00082 Subtilase family M5E03_10970 PF13673 Acetyltransferase (GNAT) domain M5E03_10980 PF00293 NUDIX domain M5E03_10985 PF00248 Aldo/keto reductase family M5E03_11000 PF12146 Serine aminopeptidase, S33 M5E03_11005 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_11010 PF10827 Protein of unknown function (DUF2552) M5E03_11015 PF01521 Iron-sulphur cluster biosynthesis M5E03_11020 PF04229 GrpB protein M5E03_11020 PF13673 Acetyltransferase (GNAT) domain M5E03_11025 PF00583 Acetyltransferase (GNAT) family M5E03_11030 PF10787 Uncharacterised protein from bacillus cereus group M5E03_11035 PF00817 impB/mucB/samB family M5E03_11035 PF11799 impB/mucB/samB family C-terminal domain M5E03_11040 PF08863 YolD-like protein M5E03_11045 PF07690 Major Facilitator Superfamily M5E03_11050 PF00485 Phosphoribulokinase / Uridine kinase family M5E03_11055 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_11055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5E03_11060 PF00106 short chain dehydrogenase M5E03_11065 PF00753 Metallo-beta-lactamase superfamily M5E03_11070 PF03807 NADP oxidoreductase coenzyme F420-dependent M5E03_11070 PF14748 Pyrroline-5-carboxylate reductase dimerisation M5E03_11080 PF01546 Peptidase family M20/M25/M40 M5E03_11085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M5E03_11090 PF12146 Serine aminopeptidase, S33 M5E03_11095 PF12897 Alanine-glyoxylate amino-transferase M5E03_11100 PF12706 Beta-lactamase superfamily domain M5E03_11105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M5E03_11105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M5E03_11110 PF07702 UTRA domain M5E03_11110 PF00392 Bacterial regulatory proteins, gntR family M5E03_11115 PF00232 Glycosyl hydrolase family 1 M5E03_11120 PF02378 Phosphotransferase system, EIIC M5E03_11125 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M5E03_11130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_11140 PF06800 Sugar transport protein M5E03_11145 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M5E03_11145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M5E03_11150 PF00817 impB/mucB/samB family M5E03_11150 PF11799 impB/mucB/samB family C-terminal domain M5E03_11150 PF11798 IMS family HHH motif M5E03_11155 PF00795 Carbon-nitrogen hydrolase M5E03_11165 PF02096 60Kd inner membrane protein M5E03_11175 PF07687 Peptidase dimerisation domain M5E03_11175 PF01546 Peptidase family M20/M25/M40 M5E03_11180 PF01039 Carboxyl transferase domain M5E03_11195 PF03734 L,D-transpeptidase catalytic domain M5E03_11200 PF11728 Putative aromatic acid exporter C-terminal domain M5E03_11200 PF06081 Aromatic acid exporter family member 1 M5E03_11205 PF00005 ABC transporter M5E03_11210 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_11215 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_11220 PF06491 Disulphide isomerase M5E03_11225 PF00781 Diacylglycerol kinase catalytic domain M5E03_11235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M5E03_11235 PF00364 Biotin-requiring enzyme M5E03_11235 PF02817 e3 binding domain M5E03_11240 PF02779 Transketolase, pyrimidine binding domain M5E03_11240 PF02780 Transketolase, C-terminal domain M5E03_11245 PF00676 Dehydrogenase E1 component M5E03_11250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M5E03_11250 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_11255 PF00871 Acetokinase family M5E03_11260 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M5E03_11260 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M5E03_11265 PF01515 Phosphate acetyl/butaryl transferase M5E03_11270 PF02954 Bacterial regulatory protein, Fis family M5E03_11270 PF00989 PAS fold M5E03_11270 PF00158 Sigma-54 interaction domain M5E03_11275 PF11118 Protein of unknown function (DUF2627) M5E03_11280 PF03009 Glycerophosphoryl diester phosphodiesterase family M5E03_11285 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_11295 PF00072 Response regulator receiver domain M5E03_11295 PF08769 Sporulation initiation factor Spo0A C terminal M5E03_11300 PF17820 PDZ domain M5E03_11300 PF05580 SpoIVB peptidase S55 M5E03_11305 PF13476 AAA domain M5E03_11310 PF01316 Arginine repressor, DNA binding domain M5E03_11310 PF02863 Arginine repressor, C-terminal domain M5E03_11315 PF01728 FtsJ-like methyltransferase M5E03_11315 PF01479 S4 domain M5E03_11320 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M5E03_11320 PF02780 Transketolase, C-terminal domain M5E03_11320 PF02779 Transketolase, pyrimidine binding domain M5E03_11325 PF00348 Polyprenyl synthetase M5E03_11330 PF02609 Exonuclease VII small subunit M5E03_11335 PF02601 Exonuclease VII, large subunit M5E03_11335 PF13742 OB-fold nucleic acid binding domain M5E03_11340 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M5E03_11340 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M5E03_11345 PF01029 NusB family M5E03_11350 PF03780 Asp23 family, cell envelope-related function M5E03_11355 PF02785 Biotin carboxylase C-terminal domain M5E03_11355 PF00289 Biotin carboxylase, N-terminal domain M5E03_11355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M5E03_11360 PF00364 Biotin-requiring enzyme M5E03_11365 PF12685 SpoIIIAH-like protein M5E03_11375 PF09581 Stage III sporulation protein AF (Spore_III_AF) M5E03_11380 PF09546 Stage III sporulation protein AE (spore_III_AE) M5E03_11385 PF06686 Stage III sporulation protein AC/AD protein family M5E03_11390 PF06686 Stage III sporulation protein AC/AD protein family M5E03_11395 PF09548 Stage III sporulation protein AB (spore_III_AB) M5E03_11405 PF10942 Protein of unknown function (DUF2619) M5E03_11410 PF09285 Elongation factor P, C-terminal M5E03_11410 PF08207 Elongation factor P (EF-P) KOW-like domain M5E03_11410 PF01132 Elongation factor P (EF-P) OB domain M5E03_11415 PF01321 Creatinase/Prolidase N-terminal domain M5E03_11415 PF00557 Metallopeptidase family M24 M5E03_11420 PF01220 Dehydroquinase class II M5E03_11425 PF11085 Conserved membrane protein YqhR M5E03_11430 PF07136 Protein of unknown function (DUF1385) M5E03_11440 PF01734 Patatin-like phospholipase M5E03_11445 PF02742 Iron dependent repressor, metal binding and dimerisation domain M5E03_11445 PF01325 Iron dependent repressor, N-terminal DNA binding domain M5E03_11450 PF03099 Biotin/lipoate A/B protein ligase family M5E03_11455 PF00581 Rhodanese-like domain M5E03_11460 PF02347 Glycine cleavage system P-protein M5E03_11465 PF02347 Glycine cleavage system P-protein M5E03_11470 PF08669 Glycine cleavage T-protein C-terminal barrel domain M5E03_11470 PF01571 Aminomethyltransferase folate-binding domain M5E03_11475 PF00176 SNF2 family N-terminal domain M5E03_11475 PF00271 Helicase conserved C-terminal domain M5E03_11480 PF11079 Bacterial protein YqhG of unknown function M5E03_11490 PF01381 Helix-turn-helix M5E03_11490 PF08671 Anti-repressor SinI M5E03_11495 PF12389 Camelysin metallo-endopeptidase M5E03_11510 PF13028 Protein of unknown function (DUF3889) M5E03_11515 PF14038 YqzE-like protein M5E03_11530 PF07963 Prokaryotic N-terminal methylation motif M5E03_11535 PF07963 Prokaryotic N-terminal methylation motif M5E03_11540 PF00482 Type II secretion system (T2SS), protein F M5E03_11545 PF00437 Type II/IV secretion system protein M5E03_11550 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain M5E03_11550 PF01740 STAS domain M5E03_11560 PF03960 ArsC family M5E03_11565 PF11117 Protein of unknown function (DUF2626) M5E03_11570 PF00753 Metallo-beta-lactamase superfamily M5E03_11575 PF10958 Protein of unknown function (DUF2759) M5E03_11580 PF01910 Thiamine-binding protein M5E03_11585 PF07690 Major Facilitator Superfamily M5E03_11590 PF00246 Zinc carboxypeptidase M5E03_11595 PF00884 Sulfatase M5E03_11600 PF00480 ROK family M5E03_11605 PF06014 Bacterial protein of unknown function (DUF910) M5E03_11610 PF01694 Rhomboid family M5E03_11625 PF01812 5-formyltetrahydrofolate cyclo-ligase family M5E03_11630 PF00471 Ribosomal protein L33 M5E03_11645 PF00005 ABC transporter M5E03_11650 PF00005 ABC transporter M5E03_11655 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_11660 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_11665 PF12849 PBP superfamily domain M5E03_11670 PF03717 Penicillin-binding Protein dimerisation domain M5E03_11670 PF00905 Penicillin binding protein transpeptidase domain M5E03_11675 PF07690 Major Facilitator Superfamily M5E03_11680 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M5E03_11680 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M5E03_11685 PF04306 Protein of unknown function (DUF456) M5E03_11690 PF06691 Protein of unknown function (DUF1189) M5E03_11695 PF13302 Acetyltransferase (GNAT) domain M5E03_11705 PF04551 GcpE protein M5E03_11720 PF00480 ROK family M5E03_11725 PF01475 Ferric uptake regulator family M5E03_11730 PF00950 ABC 3 transport family M5E03_11735 PF00005 ABC transporter M5E03_11740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M5E03_11740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M5E03_11745 PF11116 Protein of unknown function (DUF2624) M5E03_11750 PF01261 Xylose isomerase-like TIM barrel M5E03_11755 PF00270 DEAD/DEAH box helicase M5E03_11755 PF00271 Helicase conserved C-terminal domain M5E03_11765 PF02401 LytB protein M5E03_11770 PF01784 NIF3 (NGG1p interacting factor 3) M5E03_11775 PF04816 tRNA (adenine(22)-N(1))-methyltransferase M5E03_11780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M5E03_11785 PF03979 Sigma-70 factor, region 1.1 M5E03_11785 PF00140 Sigma-70 factor, region 1.2 M5E03_11785 PF04542 Sigma-70 region 2 M5E03_11785 PF04539 Sigma-70 region 3 M5E03_11785 PF04545 Sigma-70, region 4 M5E03_11790 PF10410 DnaB-helicase binding domain of primase M5E03_11790 PF08275 DNA primase catalytic core, N-terminal domain M5E03_11790 PF01807 CHC2 zinc finger M5E03_11795 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M5E03_11800 PF03618 Kinase/pyrophosphorylase M5E03_11805 PF00571 CBS domain M5E03_11805 PF08279 HTH domain M5E03_11810 PF02092 Glycyl-tRNA synthetase beta subunit M5E03_11815 PF02091 Glycyl-tRNA synthetase alpha subunit M5E03_11820 PF11967 Recombination protein O N terminal M5E03_11820 PF02565 Recombination protein O C terminal M5E03_11825 PF14006 YqzL-like protein M5E03_11830 PF07650 KH domain M5E03_11830 PF01926 50S ribosome-binding GTPase M5E03_11835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5E03_11840 PF01219 Prokaryotic diacylglycerol kinase M5E03_11845 PF02130 Uncharacterized protein family UPF0054 M5E03_11850 PF07698 7TM receptor with intracellular HD hydrolase M5E03_11850 PF07697 7TM-HD extracellular M5E03_11850 PF01966 HD domain M5E03_11855 PF02562 PhoH-like protein M5E03_11860 PF06898 Putative stage IV sporulation protein YqfD M5E03_11865 PF07873 YabP family M5E03_11875 PF12127 SigmaW regulon antibacterial M5E03_11880 PF01972 Serine dehydrogenase proteinase M5E03_11880 PF01957 NfeD-like C-terminal, partner-binding M5E03_11885 PF09424 Yqey-like protein M5E03_11890 PF01165 Ribosomal protein S21 M5E03_11895 PF02690 Na+/Pi-cotransporter M5E03_11900 PF01938 TRAM domain M5E03_11900 PF04055 Radical SAM superfamily M5E03_11900 PF00919 Uncharacterized protein family UPF0004 M5E03_11905 PF04452 RNA methyltransferase M5E03_11915 PF01556 DnaJ C terminal domain M5E03_11915 PF00226 DnaJ domain M5E03_11915 PF00684 DnaJ central domain M5E03_11920 PF00012 Hsp70 protein M5E03_11925 PF01025 GrpE M5E03_11930 PF01628 HrcA protein C terminal domain M5E03_11935 PF06969 HemN C-terminal domain M5E03_11935 PF04055 Radical SAM superfamily M5E03_11940 PF00679 Elongation factor G C-terminus M5E03_11940 PF00009 Elongation factor Tu GTP binding domain M5E03_11940 PF06421 GTP-binding protein LepA C-terminus M5E03_11940 PF03144 Elongation factor Tu domain 2 M5E03_11945 PF12438 Protein of unknown function (DUF3679) M5E03_11950 PF07454 Stage II sporulation protein P (SpoIIP) M5E03_11955 PF03418 Germination protease M5E03_11960 PF01649 Ribosomal protein S20 M5E03_11965 PF06144 DNA polymerase III, delta subunit M5E03_11970 PF14141 YqzM-like protein M5E03_11975 PF03772 Competence protein M5E03_11975 PF13567 Domain of unknown function (DUF4131) M5E03_11975 PF00753 Metallo-beta-lactamase superfamily M5E03_11980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5E03_11990 PF03807 NADP oxidoreductase coenzyme F420-dependent M5E03_11990 PF14748 Pyrroline-5-carboxylate reductase dimerisation M5E03_11995 PF13649 Methyltransferase domain M5E03_12005 PF01966 HD domain M5E03_12010 PF01467 Cytidylyltransferase-like M5E03_12015 PF01985 CRS1 / YhbY (CRM) domain M5E03_12020 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M5E03_12020 PF01488 Shikimate / quinate 5-dehydrogenase M5E03_12020 PF08501 Shikimate dehydrogenase substrate binding domain M5E03_12025 PF01926 50S ribosome-binding GTPase M5E03_12035 PF08970 Sporulation inhibitor A M5E03_12045 PF00657 GDSL-like Lipase/Acylhydrolase M5E03_12050 PF01522 Polysaccharide deacetylase M5E03_12055 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_12055 PF13176 Tetratricopeptide repeat M5E03_12060 PF04542 Sigma-70 region 2 M5E03_12060 PF04545 Sigma-70, region 4 M5E03_12065 PF05163 DinB family M5E03_12080 PF13344 Haloacid dehalogenase-like hydrolase M5E03_12080 PF00293 NUDIX domain M5E03_12090 PF13739 Deacetylase PdaC M5E03_12090 PF01522 Polysaccharide deacetylase M5E03_12090 PF11738 Protein of unknown function (DUF3298) M5E03_12105 PF09221 Bacteriocin class IId cyclical uberolysin-like M5E03_12125 PF00005 ABC transporter M5E03_12140 PF00083 Sugar (and other) transporter M5E03_12145 PF11762 L-arabinose isomerase C-terminal domain M5E03_12145 PF02610 L-arabinose isomerase M5E03_12150 PF00596 Class II Aldolase and Adducin N-terminal domain M5E03_12160 PF00392 Bacterial regulatory proteins, gntR family M5E03_12170 PF01380 SIS domain M5E03_12175 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M5E03_12180 PF01638 HxlR-like helix-turn-helix M5E03_12185 PF07859 alpha/beta hydrolase fold M5E03_12230 PF00440 Bacterial regulatory proteins, tetR family M5E03_12235 PF01040 UbiA prenyltransferase family M5E03_12240 PF00905 Penicillin binding protein transpeptidase domain M5E03_12245 PF08028 Acyl-CoA dehydrogenase, C-terminal domain M5E03_12245 PF02770 Acyl-CoA dehydrogenase, middle domain M5E03_12245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5E03_12250 PF00005 ABC transporter M5E03_12255 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_12260 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_12265 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_12270 PF05067 Manganese containing catalase M5E03_12275 PF08240 Alcohol dehydrogenase GroES-like domain M5E03_12275 PF00107 Zinc-binding dehydrogenase M5E03_12290 PF00005 ABC transporter M5E03_12290 PF00664 ABC transporter transmembrane region M5E03_12295 PF00583 Acetyltransferase (GNAT) family M5E03_12300 PF08241 Methyltransferase domain M5E03_12305 PF08240 Alcohol dehydrogenase GroES-like domain M5E03_12305 PF00107 Zinc-binding dehydrogenase M5E03_12310 PF08241 Methyltransferase domain M5E03_12325 PF09501 Probable sporulation protein (Bac_small_yrzI) M5E03_12330 PF14143 YrhC-like protein M5E03_12335 PF01053 Cys/Met metabolism PLP-dependent enzyme M5E03_12340 PF00291 Pyridoxal-phosphate dependent enzyme M5E03_12345 PF01048 Phosphorylase superfamily M5E03_12350 PF13649 Methyltransferase domain M5E03_12355 PF10750 Protein of unknown function (DUF2536) M5E03_12360 PF07423 Domain of unknown function (DUF1510) M5E03_12365 PF00905 Penicillin binding protein transpeptidase domain M5E03_12365 PF03717 Penicillin-binding Protein dimerisation domain M5E03_12370 PF03449 Transcription elongation factor, N-terminal M5E03_12370 PF01272 Transcription elongation factor, GreA/GreB, C-term M5E03_12375 PF02368 Bacterial Ig-like domain (group 2) M5E03_12380 PF00485 Phosphoribulokinase / Uridine kinase family M5E03_12385 PF01136 Peptidase family U32 M5E03_12385 PF16325 Peptidase family U32 C-terminal domain M5E03_12390 PF01136 Peptidase family U32 M5E03_12395 PF01596 O-methyltransferase M5E03_12400 PF02618 YceG-like family M5E03_12405 PF00108 Thiolase, N-terminal domain M5E03_12405 PF02803 Thiolase, C-terminal domain M5E03_12410 PF13193 AMP-binding enzyme C-terminal domain M5E03_12410 PF00501 AMP-binding enzyme M5E03_12415 PF02632 BioY family M5E03_12420 PF06949 Protein of unknown function (DUF1292) M5E03_12425 PF03652 Holliday junction resolvase M5E03_12430 PF06135 IreB regulatory phosphoprotein M5E03_12435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M5E03_12435 PF02272 DHHA1 domain M5E03_12435 PF01411 tRNA synthetases class II (A) M5E03_12440 PF01594 AI-2E family transporter M5E03_12445 PF00005 ABC transporter M5E03_12450 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_12455 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_12460 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_12475 PF05239 PRC-barrel domain M5E03_12480 PF13538 UvrD-like helicase C-terminal domain M5E03_12480 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain M5E03_12480 PF14490 Helix-hairpin-helix containing domain M5E03_12485 PF13181 Tetratricopeptide repeat M5E03_12485 PF07719 Tetratricopeptide repeat M5E03_12495 PF00266 Aminotransferase class-V M5E03_12500 PF02082 Transcriptional regulator M5E03_12505 PF16193 AAA C-terminal domain M5E03_12505 PF12002 MgsA AAA+ ATPase C terminal M5E03_12505 PF05496 Holliday junction DNA helicase RuvB P-loop domain M5E03_12510 PF00899 ThiF family M5E03_12520 PF00152 tRNA synthetases class II (D, K and N) M5E03_12520 PF02938 GAD domain M5E03_12520 PF01336 OB-fold nucleic acid binding domain M5E03_12525 PF03129 Anticodon binding domain M5E03_12525 PF13393 Histidyl-tRNA synthetase M5E03_12535 PF08239 Bacterial SH3 domain M5E03_12535 PF01520 N-acetylmuramoyl-L-alanine amidase M5E03_12540 PF02580 D-Tyr-tRNA(Tyr) deacylase M5E03_12545 PF13291 ACT domain M5E03_12545 PF04607 Region found in RelA / SpoT proteins M5E03_12545 PF02824 TGS domain M5E03_12550 PF00156 Phosphoribosyl transferase domain M5E03_12555 PF10141 Single-strand DNA-specific exonuclease, C terminal domain M5E03_12555 PF17768 RecJ OB domain M5E03_12555 PF02272 DHHA1 domain M5E03_12555 PF01368 DHH family M5E03_12560 PF06305 Lipopolysaccharide assembly protein A domain M5E03_12565 PF02080 TrkA-C domain M5E03_12570 PF07549 SecD/SecF GG Motif M5E03_12570 PF02355 Protein export membrane protein M5E03_12575 PF13797 Post-transcriptional regulator M5E03_12580 PF14667 Polysaccharide biosynthesis C-terminal domain M5E03_12580 PF01943 Polysaccharide biosynthesis protein M5E03_12585 PF04239 Protein of unknown function (DUF421) M5E03_12590 PF12670 Protein of unknown function (DUF3792) M5E03_12595 PF02699 Preprotein translocase subunit M5E03_12600 PF01702 Queuine tRNA-ribosyltransferase M5E03_12605 PF02547 Queuosine biosynthesis protein M5E03_12610 PF11146 Protein of unknown function (DUF2905) M5E03_12615 PF05496 Holliday junction DNA helicase RuvB P-loop domain M5E03_12615 PF17864 RuvB AAA lid domain M5E03_12615 PF05491 RuvB C-terminal winged helix domain M5E03_12620 PF07499 RuvA, C-terminal domain M5E03_12620 PF01330 RuvA N terminal domain M5E03_12625 PF08955 BofC C-terminal domain M5E03_12625 PF08977 Bypass of Forespore C, N terminal M5E03_12645 PF13667 ThiC-associated domain M5E03_12645 PF01964 Radical SAM ThiC family M5E03_12655 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M5E03_12660 PF01476 LysM domain M5E03_12660 PF01476 LysM domain M5E03_12665 PF02445 Quinolinate synthetase A protein M5E03_12670 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M5E03_12670 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M5E03_12675 PF00890 FAD binding domain M5E03_12675 PF02910 Fumarate reductase flavoprotein C-term M5E03_12680 PF00266 Aminotransferase class-V M5E03_12685 PF02829 3H domain M5E03_12685 PF08279 HTH domain M5E03_12690 PF01842 ACT domain M5E03_12690 PF00800 Prephenate dehydratase M5E03_12695 PF01842 ACT domain M5E03_12700 PF01926 50S ribosome-binding GTPase M5E03_12700 PF09269 Domain of unknown function (DUF1967) M5E03_12700 PF01018 GTP1/OBG M5E03_12705 PF14682 Sporulation initiation phospho-transferase B, C-terminal M5E03_12705 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M5E03_12710 PF01016 Ribosomal L27 protein M5E03_12715 PF04327 Cysteine protease Prp M5E03_12720 PF00829 Ribosomal prokaryotic L21 protein M5E03_12725 PF02163 Peptidase family M50 M5E03_12730 PF01551 Peptidase family M23 M5E03_12735 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M5E03_12740 PF03775 Septum formation inhibitor MinC, C-terminal domain M5E03_12745 PF04093 rod shape-determining protein MreD M5E03_12750 PF04085 rod shape-determining protein MreC M5E03_12760 PF04002 RadC-like JAB domain M5E03_12765 PF02545 Maf-like protein M5E03_12775 PF06750 Bacterial Peptidase A24 N-terminal domain M5E03_12775 PF01478 Type IV leader peptidase family M5E03_12785 PF02875 Mur ligase family, glutamate ligase domain M5E03_12785 PF08245 Mur ligase middle domain M5E03_12790 PF08264 Anticodon-binding domain of tRNA M5E03_12790 PF00133 tRNA synthetases class I (I, L, M and V) M5E03_12790 PF10458 Valyl tRNA synthetase tRNA binding arm M5E03_12805 PF01476 LysM domain M5E03_12810 PF00202 Aminotransferase class-III M5E03_12815 PF00490 Delta-aminolevulinic acid dehydratase M5E03_12820 PF02602 Uroporphyrinogen-III synthase HemD M5E03_12825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M5E03_12825 PF03900 Porphobilinogen deaminase, C-terminal domain M5E03_12830 PF01578 Cytochrome C assembly protein M5E03_12835 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M5E03_12835 PF01488 Shikimate / quinate 5-dehydrogenase M5E03_12835 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M5E03_12845 PF01926 50S ribosome-binding GTPase M5E03_12850 PF05362 Lon protease (S16) C-terminal proteolytic domain M5E03_12850 PF02190 ATP-dependent protease La (LON) substrate-binding domain M5E03_12850 PF00004 ATPase family associated with various cellular activities (AAA) M5E03_12855 PF00004 ATPase family associated with various cellular activities (AAA) M5E03_12855 PF05362 Lon protease (S16) C-terminal proteolytic domain M5E03_12860 PF07724 AAA domain (Cdc48 subfamily) M5E03_12860 PF10431 C-terminal, D2-small domain, of ClpB protein M5E03_12860 PF06689 ClpX C4-type zinc finger M5E03_12865 PF05698 Bacterial trigger factor protein (TF) C-terminus M5E03_12865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M5E03_12865 PF05697 Bacterial trigger factor protein (TF) M5E03_12875 PF00694 Aconitase C-terminal domain M5E03_12880 PF00330 Aconitase family (aconitate hydratase) M5E03_12885 PF00180 Isocitrate/isopropylmalate dehydrogenase M5E03_12890 PF00682 HMGL-like M5E03_12890 PF08502 LeuA allosteric (dimerisation) domain M5E03_12895 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M5E03_12895 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M5E03_12900 PF01842 ACT domain M5E03_12900 PF10369 Small subunit of acetolactate synthase M5E03_12905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5E03_12905 PF00205 Thiamine pyrophosphate enzyme, central domain M5E03_12905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5E03_12910 PF01063 Amino-transferase class IV M5E03_12915 PF10282 Lactonase, 7-bladed beta-propeller M5E03_12920 PF06803 Protein of unknown function (DUF1232) M5E03_12925 PF04914 DltD protein M5E03_12930 PF00550 Phosphopantetheine attachment site M5E03_12935 PF03062 MBOAT, membrane-bound O-acyltransferase family M5E03_12940 PF13193 AMP-binding enzyme C-terminal domain M5E03_12940 PF00501 AMP-binding enzyme M5E03_12945 PF12459 D-Ala-teichoic acid biosynthesis protein M5E03_12975 PF12850 Calcineurin-like phosphoesterase superfamily domain M5E03_12980 PF01725 Ham1 family M5E03_12985 PF01138 3' exoribonuclease family, domain 1 M5E03_12985 PF03725 3' exoribonuclease family, domain 2 M5E03_12990 PF10646 Sporulation and spore germination M5E03_12995 PF01177 Asp/Glu/Hydantoin racemase M5E03_13000 PF01047 MarR family M5E03_13005 PF00196 Bacterial regulatory proteins, luxR family M5E03_13010 PF03600 Citrate transporter M5E03_13015 PF03466 LysR substrate binding domain M5E03_13015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_13020 PF04303 PrpF protein M5E03_13025 PF03099 Biotin/lipoate A/B protein ligase family M5E03_13025 PF02237 Biotin protein ligase C terminal domain M5E03_13030 PF03061 Thioesterase superfamily M5E03_13035 PF13085 2Fe-2S iron-sulfur cluster binding domain M5E03_13035 PF13183 4Fe-4S dicluster domain M5E03_13040 PF00890 FAD binding domain M5E03_13040 PF02910 Fumarate reductase flavoprotein C-term M5E03_13045 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M5E03_13050 PF10702 Protein of unknown function (DUF2507) M5E03_13055 PF00696 Amino acid kinase family M5E03_13055 PF01842 ACT domain M5E03_13055 PF13840 ACT domain M5E03_13060 PF02151 UvrB/uvrC motif M5E03_13060 PF01541 GIY-YIG catalytic domain M5E03_13060 PF08459 UvrC Helix-hairpin-helix N-terminal M5E03_13065 PF00085 Thioredoxin M5E03_13070 PF06964 Alpha-L-arabinofuranosidase C-terminal domain M5E03_13075 PF01012 Electron transfer flavoprotein domain M5E03_13075 PF00766 Electron transfer flavoprotein FAD-binding domain M5E03_13080 PF01012 Electron transfer flavoprotein domain M5E03_13085 PF00378 Enoyl-CoA hydratase/isomerase M5E03_13090 PF08359 YsiA-like protein, C-terminal region M5E03_13090 PF00440 Bacterial regulatory proteins, tetR family M5E03_13095 PF00501 AMP-binding enzyme M5E03_13095 PF13193 AMP-binding enzyme C-terminal domain M5E03_13105 PF03994 Domain of Unknown Function (DUF350) M5E03_13110 PF00488 MutS domain V M5E03_13110 PF01713 Smr domain M5E03_13115 PF14791 DNA polymerase beta thumb M5E03_13115 PF14716 Helix-hairpin-helix domain M5E03_13115 PF02811 PHP domain M5E03_13120 PF02674 Colicin V production protein M5E03_13125 PF05164 Cell division protein ZapA M5E03_13130 PF11858 Domain of unknown function (DUF3378) M5E03_13130 PF01351 Ribonuclease HII M5E03_13135 PF03147 Ferredoxin-fold anticodon binding domain M5E03_13135 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M5E03_13135 PF01588 Putative tRNA binding domain M5E03_13135 PF03483 B3/4 domain M5E03_13135 PF03484 tRNA synthetase B5 domain M5E03_13140 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M5E03_13140 PF01409 tRNA synthetases class II core domain (F) M5E03_13145 PF08032 RNA 2'-O ribose methyltransferase substrate binding M5E03_13145 PF00588 SpoU rRNA Methylase family M5E03_13150 PF14098 Small, acid-soluble spore protein I M5E03_13155 PF02554 Carbon starvation protein CstA M5E03_13155 PF13722 5TM C-terminal transporter carbon starvation CstA M5E03_13160 PF05343 M42 glutamyl aminopeptidase M5E03_13170 PF06961 Protein of unknown function (DUF1294) M5E03_13175 PF00453 Ribosomal protein L20 M5E03_13180 PF01632 Ribosomal protein L35 M5E03_13185 PF00707 Translation initiation factor IF-3, C-terminal domain M5E03_13185 PF05198 Translation initiation factor IF-3, N-terminal domain M5E03_13190 PF04172 LrgB-like family M5E03_13195 PF03788 LrgA family M5E03_13200 PF04397 LytTr DNA-binding domain M5E03_13200 PF00072 Response regulator receiver domain M5E03_13205 PF07694 5TMR of 5TMR-LYT M5E03_13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_13205 PF06580 Histidine kinase M5E03_13210 PF13419 Haloacid dehalogenase-like hydrolase M5E03_13215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_13215 PF08447 PAS fold M5E03_13215 PF13426 PAS domain M5E03_13220 PF03129 Anticodon binding domain M5E03_13220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M5E03_13220 PF02824 TGS domain M5E03_13220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M5E03_13225 PF08812 YtxC-like family M5E03_13230 PF09335 SNARE associated Golgi protein M5E03_13235 PF01695 IstB-like ATP binding protein M5E03_13235 PF07319 Primosomal protein DnaI N-terminus M5E03_13240 PF07261 Replication initiation and membrane attachment M5E03_13245 PF03477 ATP cone domain M5E03_13255 PF02675 S-adenosylmethionine decarboxylase M5E03_13260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M5E03_13260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M5E03_13265 PF01121 Dephospho-CoA kinase M5E03_13270 PF02659 Putative manganese efflux pump M5E03_13275 PF06827 Zinc finger found in FPG and IleRS M5E03_13275 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M5E03_13275 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M5E03_13280 PF00476 DNA polymerase family A M5E03_13280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M5E03_13280 PF01367 5'-3' exonuclease, C-terminal SAM fold M5E03_13285 PF16736 Single Cache-like M5E03_13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_13285 PF00512 His Kinase A (phospho-acceptor) domain M5E03_13285 PF00989 PAS fold M5E03_13290 PF00486 Transcriptional regulatory protein, C terminal M5E03_13290 PF00072 Response regulator receiver domain M5E03_13295 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M5E03_13295 PF00056 lactate/malate dehydrogenase, NAD binding domain M5E03_13300 PF00180 Isocitrate/isopropylmalate dehydrogenase M5E03_13305 PF00285 Citrate synthase, C-terminal domain M5E03_13310 PF04284 Protein of unknown function (DUF441) M5E03_13315 PF01594 AI-2E family transporter M5E03_13320 PF04186 FxsA cytoplasmic membrane protein M5E03_13325 PF00391 PEP-utilising enzyme, mobile domain M5E03_13325 PF00224 Pyruvate kinase, barrel domain M5E03_13325 PF02887 Pyruvate kinase, alpha/beta domain M5E03_13330 PF00365 Phosphofructokinase M5E03_13335 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M5E03_13340 PF01039 Carboxyl transferase domain M5E03_13340 PF17848 Acetyl-coA carboxylase zinc finger domain M5E03_13345 PF00390 Malic enzyme, N-terminal domain M5E03_13345 PF03949 Malic enzyme, NAD binding domain M5E03_13350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M5E03_13350 PF01336 OB-fold nucleic acid binding domain M5E03_13350 PF14579 Helix-hairpin-helix motif M5E03_13350 PF07733 Bacterial DNA polymerase III alpha NTPase domain M5E03_13350 PF02811 PHP domain M5E03_13355 PF14034 Sporulation protein YtrH M5E03_13370 PF01368 DHH family M5E03_13370 PF02272 DHHA1 domain M5E03_13375 PF14007 YtpI-like protein M5E03_13380 PF07085 DRTGG domain M5E03_13380 PF00392 Bacterial regulatory proteins, gntR family M5E03_13380 PF03061 Thioesterase superfamily M5E03_13380 PF00571 CBS domain M5E03_13400 PF14698 Argininosuccinate lyase C-terminal M5E03_13400 PF00206 Lyase M5E03_13405 PF00764 Arginosuccinate synthase M5E03_13410 PF00994 Probable molybdopterin binding domain M5E03_13415 PF00871 Acetokinase family M5E03_13420 PF02384 N-6 DNA Methylase M5E03_13425 PF08534 Redoxin M5E03_13430 PF09579 Sporulation protein YtfJ (Spore_YtfJ) M5E03_13435 PF11167 Protein of unknown function (DUF2953) M5E03_13440 PF06271 RDD family M5E03_13445 PF01343 Peptidase family S49 M5E03_13450 PF01513 ATP-NAD kinase M5E03_13455 PF03880 DbpA RNA binding domain M5E03_13455 PF00270 DEAD/DEAH box helicase M5E03_13455 PF00271 Helicase conserved C-terminal domain M5E03_13460 PF00487 Fatty acid desaturase M5E03_13465 PF07730 Histidine kinase M5E03_13470 PF00196 Bacterial regulatory proteins, luxR family M5E03_13470 PF00072 Response regulator receiver domain M5E03_13475 PF01497 Periplasmic binding protein M5E03_13480 PF00072 Response regulator receiver domain M5E03_13480 PF00486 Transcriptional regulatory protein, C terminal M5E03_13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_13490 PF01098 Cell cycle protein M5E03_13495 PF03551 Transcriptional regulator PadR-like family M5E03_13500 PF00005 ABC transporter M5E03_13505 PF02687 FtsX-like permease family M5E03_13510 PF01979 Amidohydrolase family M5E03_13515 PF01810 LysE type translocator M5E03_13520 PF13193 AMP-binding enzyme C-terminal domain M5E03_13520 PF00501 AMP-binding enzyme M5E03_13525 PF00269 Small, acid-soluble spore proteins, alpha/beta type M5E03_13530 PF02568 Thiamine biosynthesis protein (ThiI) M5E03_13530 PF02926 THUMP domain M5E03_13535 PF00266 Aminotransferase class-V M5E03_13540 PF05525 Branched-chain amino acid transport protein M5E03_13545 PF05525 Branched-chain amino acid transport protein M5E03_13550 PF06160 Septation ring formation regulator, EzrA M5E03_13555 PF02811 PHP domain M5E03_13560 PF00440 Bacterial regulatory proteins, tetR family M5E03_13565 PF13185 GAF domain M5E03_13570 PF00163 Ribosomal protein S4/S9 N-terminal domain M5E03_13570 PF01479 S4 domain M5E03_13580 PF00857 Isochorismatase family M5E03_13585 PF01674 Lipase (class 2) M5E03_13590 PF03992 Antibiotic biosynthesis monooxygenase M5E03_13595 PF01479 S4 domain M5E03_13595 PF00579 tRNA synthetases class I (W and Y) M5E03_13600 PF00501 AMP-binding enzyme M5E03_13600 PF13193 AMP-binding enzyme C-terminal domain M5E03_13605 PF00583 Acetyltransferase (GNAT) family M5E03_13610 PF00571 CBS domain M5E03_13615 PF00850 Histone deacetylase domain M5E03_13620 PF00356 Bacterial regulatory proteins, lacI family M5E03_13625 PF01817 Chorismate mutase type II M5E03_13625 PF00793 DAHP synthetase I family M5E03_13630 PF11009 Protein of unknown function (DUF2847) M5E03_13635 PF12732 YtxH-like protein M5E03_13640 PF06103 Bacterial protein of unknown function (DUF948) M5E03_13645 PF01225 Mur ligase family, catalytic domain M5E03_13645 PF02875 Mur ligase family, glutamate ligase domain M5E03_13645 PF08245 Mur ligase middle domain M5E03_13650 PF09397 Ftsk gamma domain M5E03_13650 PF17854 FtsK alpha domain M5E03_13650 PF01580 FtsK/SpoIIIE family M5E03_13655 PF01588 Putative tRNA binding domain M5E03_13655 PF14794 Domain of unknown function (DUF4479) M5E03_13660 PF07285 Protein of unknown function (DUF1444) M5E03_13665 PF00085 Thioredoxin M5E03_13675 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ M5E03_13680 PF05343 M42 glutamyl aminopeptidase M5E03_13685 PF03413 Peptidase propeptide and YPEB domain M5E03_13690 PF00390 Malic enzyme, N-terminal domain M5E03_13690 PF03949 Malic enzyme, NAD binding domain M5E03_13695 PF00753 Metallo-beta-lactamase superfamily M5E03_13700 PF02390 Putative methyltransferase M5E03_13705 PF14165 YtzH-like protein M5E03_13710 PF01636 Phosphotransferase enzyme family M5E03_13715 PF00781 Diacylglycerol kinase catalytic domain M5E03_13730 PF00291 Pyridoxal-phosphate dependent enzyme M5E03_13735 PF03575 Peptidase family S51 M5E03_13740 PF01546 Peptidase family M20/M25/M40 M5E03_13745 PF00860 Permease family M5E03_13750 PF08220 DeoR-like helix-turn-helix domain M5E03_13755 PF00849 RNA pseudouridylate synthase M5E03_13755 PF01479 S4 domain M5E03_13760 PF01943 Polysaccharide biosynthesis protein M5E03_13760 PF14667 Polysaccharide biosynthesis C-terminal domain M5E03_13775 PF02028 BCCT, betaine/carnitine/choline family transporter M5E03_13785 PF10957 Sporulation protein Cse60 M5E03_13790 PF00581 Rhodanese-like domain M5E03_13795 PF04854 Protein of unknown function, DUF624 M5E03_13800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M5E03_13800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M5E03_13810 PF07470 Glycosyl Hydrolase Family 88 M5E03_13815 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_13820 PF17853 GGDEF-like domain M5E03_13820 PF12833 Helix-turn-helix domain M5E03_13825 PF01638 HxlR-like helix-turn-helix M5E03_13830 PF07690 Major Facilitator Superfamily M5E03_13835 PF00248 Aldo/keto reductase family M5E03_13840 PF13416 Bacterial extracellular solute-binding protein M5E03_13845 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_13850 PF01370 NAD dependent epimerase/dehydratase family M5E03_13855 PF01738 Dienelactone hydrolase family M5E03_13860 PF08264 Anticodon-binding domain of tRNA M5E03_13860 PF00133 tRNA synthetases class I (I, L, M and V) M5E03_13860 PF13603 Leucyl-tRNA synthetase, Domain 2 M5E03_13860 PF09334 tRNA synthetases class I (M) M5E03_13865 PF14074 Protein of unknown function (DUF4257) M5E03_13870 PF13426 PAS domain M5E03_13870 PF01740 STAS domain M5E03_13875 PF04791 LMBR1-like membrane protein M5E03_13880 PF02687 FtsX-like permease family M5E03_13880 PF12704 MacB-like periplasmic core domain M5E03_13885 PF00005 ABC transporter M5E03_13895 PF00005 ABC transporter M5E03_13900 PF00392 Bacterial regulatory proteins, gntR family M5E03_13910 PF10732 Protein of unknown function (DUF2524) M5E03_13915 PF16199 Radical_SAM C-terminal domain M5E03_13915 PF04055 Radical SAM superfamily M5E03_13920 PF06962 Putative rRNA methylase M5E03_13925 PF10776 Protein of unknown function (DUF2600) M5E03_13930 PF12146 Serine aminopeptidase, S33 M5E03_13935 PF00132 Bacterial transferase hexapeptide (six repeats) M5E03_13940 PF00733 Asparagine synthase M5E03_13940 PF13537 Glutamine amidotransferase domain M5E03_13945 PF02773 S-adenosylmethionine synthetase, C-terminal domain M5E03_13945 PF02772 S-adenosylmethionine synthetase, central domain M5E03_13945 PF00438 S-adenosylmethionine synthetase, N-terminal domain M5E03_13950 PF01293 Phosphoenolpyruvate carboxykinase M5E03_13955 PF10763 Protein of unknown function (DUF2584) M5E03_13960 PF00326 Prolyl oligopeptidase family M5E03_13965 PF01593 Flavin containing amine oxidoreductase M5E03_13970 PF00535 Glycosyl transferase family 2 M5E03_13990 PF00005 ABC transporter M5E03_13995 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_14000 PF00293 NUDIX domain M5E03_14005 PF02342 TerD domain M5E03_14020 PF05105 Bacteriophage holin family M5E03_14030 PF00210 Ferritin-like domain M5E03_14040 PF13115 YtkA-like M5E03_14045 PF02664 S-Ribosylhomocysteinase (LuxS) M5E03_14050 PF01809 Putative membrane protein insertion efficiency factor M5E03_14055 PF00484 Carbonic anhydrase M5E03_14060 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment M5E03_14060 PF01297 Zinc-uptake complex component A periplasmic M5E03_14065 PF01197 Ribosomal protein L31 M5E03_14070 PF01654 Cytochrome bd terminal oxidase subunit I M5E03_14075 PF02322 Cytochrome bd terminal oxidase subunit II M5E03_14080 PF07561 Domain of Unknown Function (DUF1540) M5E03_14090 PF13378 Enolase C-terminal domain-like M5E03_14090 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain M5E03_14095 PF00501 AMP-binding enzyme M5E03_14095 PF13193 AMP-binding enzyme C-terminal domain M5E03_14100 PF00378 Enoyl-CoA hydratase/isomerase M5E03_14105 PF00561 alpha/beta hydrolase fold M5E03_14110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5E03_14110 PF16582 Middle domain of thiamine pyrophosphate M5E03_14110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5E03_14115 PF00425 chorismate binding enzyme M5E03_14120 PF01040 UbiA prenyltransferase family M5E03_14125 PF01258 Prokaryotic dksA/traR C4-type zinc finger M5E03_14130 PF03073 TspO/MBR family M5E03_14255 PF09515 Thiamine transporter protein (Thia_YuaJ) M5E03_14265 PF00583 Acetyltransferase (GNAT) family M5E03_14270 PF01145 SPFH domain / Band 7 family M5E03_14270 PF15975 Flotillin M5E03_14280 PF12867 DinB superfamily M5E03_14285 PF00465 Iron-containing alcohol dehydrogenase M5E03_14290 PF00171 Aldehyde dehydrogenase family M5E03_14310 PF01471 Putative peptidoglycan binding domain M5E03_14310 PF01510 N-acetylmuramoyl-L-alanine amidase M5E03_14315 PF04688 SPP1 phage holin M5E03_14320 PF10960 BhlA holin family M5E03_14355 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) M5E03_14360 PF04865 Baseplate J-like protein M5E03_14365 PF10934 Protein of unknown function (DUF2634) M5E03_14370 PF10844 Protein of unknown function (DUF2577) M5E03_14380 PF01476 LysM domain M5E03_14385 PF01464 Transglycosylase SLT domain M5E03_14395 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC M5E03_14400 PF09393 Phage tail tube protein M5E03_14405 PF17482 Phage tail sheath C-terminal domain M5E03_14405 PF04984 Phage tail sheath protein subtilisin-like domain M5E03_14405 PF17481 Phage tail sheath protein beta-sandwich domain M5E03_14420 PF04883 Bacteriophage HK97-gp10, putative tail-component M5E03_14425 PF12206 Domain of unknown function (DUF3599) M5E03_14430 PF11436 Protein of unknown function (DUF3199) M5E03_14435 PF05065 Phage capsid family M5E03_14440 PF14550 Putative phage serine protease XkdF M5E03_14445 PF04860 Phage portal protein M5E03_14450 PF17288 Terminase RNAseH like domain M5E03_14450 PF04466 Phage terminase large subunit M5E03_14455 PF10668 Phage terminase small subunit M5E03_14460 PF08281 Sigma-70, region 4 M5E03_14465 PF17356 Phage-like element PBSX protein XtrA M5E03_14490 PF01381 Helix-turn-helix M5E03_14500 PF04055 Radical SAM superfamily M5E03_14500 PF06968 Biotin and Thiamin Synthesis associated domain M5E03_14510 PF02673 Bacitracin resistance protein BacA M5E03_14515 PF01594 AI-2E family transporter M5E03_14525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M5E03_14525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain M5E03_14530 PF01965 DJ-1/PfpI family M5E03_14535 PF02743 Cache domain M5E03_14535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_14535 PF00672 HAMP domain M5E03_14540 PF00672 HAMP domain M5E03_14540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_14540 PF02743 Cache domain M5E03_14545 PF02743 Cache domain M5E03_14545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_14545 PF00672 HAMP domain M5E03_14550 PF02743 Cache domain M5E03_14550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_14550 PF00672 HAMP domain M5E03_14565 PF03060 Nitronate monooxygenase M5E03_14570 PF01894 Uncharacterised protein family UPF0047 M5E03_14575 PF00571 CBS domain M5E03_14575 PF03471 Transporter associated domain M5E03_14575 PF01595 Cyclin M transmembrane N-terminal domain M5E03_14580 PF04298 Putative neutral zinc metallopeptidase M5E03_14590 PF02254 TrkA-N domain M5E03_14590 PF07885 Ion channel M5E03_14595 PF08868 YugN-like family M5E03_14605 PF00342 Phosphoglucose isomerase M5E03_14610 PF00465 Iron-containing alcohol dehydrogenase M5E03_14615 PF00465 Iron-containing alcohol dehydrogenase M5E03_14620 PF04070 Domain of unknown function (DUF378) M5E03_14625 PF00575 S1 RNA binding domain M5E03_14630 PF00155 Aminotransferase class I and II M5E03_14635 PF01037 Lrp/AsnC ligand binding domain M5E03_14640 PF00561 alpha/beta hydrolase fold M5E03_14640 PF08386 TAP-like protein M5E03_14645 PF08958 Domain of unknown function (DUF1871) M5E03_14650 PF00155 Aminotransferase class I and II M5E03_14655 PF00512 His Kinase A (phospho-acceptor) domain M5E03_14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_14665 PF08810 Kinase associated protein B M5E03_14670 PF00929 Exonuclease M5E03_14675 PF07690 Major Facilitator Superfamily M5E03_14680 PF00905 Penicillin binding protein transpeptidase domain M5E03_14680 PF00912 Transglycosylase M5E03_14685 PF04134 Protein of unknown function, DUF393 M5E03_14690 PF17328 Family of unknown function (DUF5366) M5E03_14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_14695 PF00989 PAS fold M5E03_14695 PF17203 Single cache domain 3 M5E03_14695 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M5E03_14700 PF00072 Response regulator receiver domain M5E03_14705 PF02608 ABC transporter substrate-binding protein PnrA-like M5E03_14710 PF00005 ABC transporter M5E03_14715 PF02653 Branched-chain amino acid transport system / permease component M5E03_14720 PF02653 Branched-chain amino acid transport system / permease component M5E03_14725 PF03390 2-hydroxycarboxylate transporter family M5E03_14735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus M5E03_14735 PF00361 Proton-conducting membrane transporter M5E03_14735 PF13244 Domain of unknown function (DUF4040) M5E03_14740 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter M5E03_14745 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L M5E03_14750 PF00361 Proton-conducting membrane transporter M5E03_14755 PF01899 Na+/H+ ion antiporter subunit M5E03_14760 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) M5E03_14765 PF03334 Na+/H+ antiporter subunit M5E03_14770 PF03061 Thioesterase superfamily M5E03_14775 PF00072 Response regulator receiver domain M5E03_14775 PF00196 Bacterial regulatory proteins, luxR family M5E03_14780 PF07730 Histidine kinase M5E03_14780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_14790 PF00348 Polyprenyl synthetase M5E03_14795 PF08181 DegQ (SacQ) family M5E03_14805 PF08668 HDOD domain M5E03_14805 PF00563 EAL domain M5E03_14810 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain M5E03_14810 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain M5E03_14810 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family M5E03_14815 PF00857 Isochorismatase family M5E03_14820 PF07997 Protein of unknown function (DUF1694) M5E03_14825 PF14166 YueH-like protein M5E03_14830 PF10676 Spore germination protein gerPA/gerPF M5E03_14835 PF10676 Spore germination protein gerPA/gerPF M5E03_14840 PF01594 AI-2E family transporter M5E03_14845 PF10842 Protein of unknown function (DUF2642) M5E03_14855 PF01966 HD domain M5E03_14860 PF00106 short chain dehydrogenase M5E03_14865 PF17355 Family of unknown function (DUF5383) M5E03_14875 PF01580 FtsK/SpoIIIE family M5E03_14875 PF12538 DNA transporter M5E03_14880 PF10140 WXG100 protein secretion system (Wss), protein YukC M5E03_14885 PF08817 WXG100 protein secretion system (Wss), protein YukD M5E03_14890 PF06013 Proteins of 100 residues with WXG M5E03_14895 PF17853 GGDEF-like domain M5E03_14895 PF13556 PucR C-terminal helix-turn-helix domain M5E03_14895 PF06018 CodY GAF-like domain M5E03_14900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M5E03_14900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M5E03_14905 PF02632 BioY family M5E03_14910 PF07070 SpoOM protein M5E03_14915 PF13726 Na+-H+ antiporter family M5E03_14915 PF03553 Na+/H+ antiporter family M5E03_14920 PF00883 Cytosol aminopeptidase family, catalytic domain M5E03_14920 PF02789 Cytosol aminopeptidase family, N-terminal domain M5E03_14925 PF02681 Divergent PAP2 family M5E03_14930 PF06725 3D domain M5E03_14935 PF14068 Putative membrane protein M5E03_14940 PF17302 Family of unknown function (DUF5351) M5E03_14945 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_14950 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_14960 PF07739 TipAS antibiotic-recognition domain M5E03_14960 PF13411 MerR HTH family regulatory protein M5E03_14995 PF01521 Iron-sulphur cluster biosynthesis M5E03_15000 PF01678 Diaminopimelate epimerase M5E03_15005 PF07293 Protein of unknown function (DUF1450) M5E03_15010 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_15020 PF07315 Protein of unknown function (DUF1462) M5E03_15030 PF07676 WD40-like Beta Propeller Repeat M5E03_15030 PF00326 Prolyl oligopeptidase family M5E03_15035 PF08544 GHMP kinases C terminal M5E03_15035 PF00288 GHMP kinases N terminal domain M5E03_15040 PF00291 Pyridoxal-phosphate dependent enzyme M5E03_15045 PF01842 ACT domain M5E03_15045 PF00742 Homoserine dehydrogenase M5E03_15045 PF03447 Homoserine dehydrogenase, NAD binding domain M5E03_15050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M5E03_15050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5E03_15060 PF04608 Phosphatidylglycerophosphatase A M5E03_15065 PF13344 Haloacid dehalogenase-like hydrolase M5E03_15070 PF01934 Protein of unknown function DUF86 M5E03_15075 PF06265 Protein of unknown function (DUF1027) M5E03_15080 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) M5E03_15085 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M5E03_15085 PF04055 Radical SAM superfamily M5E03_15090 PF01551 Peptidase family M23 M5E03_15095 PF09560 Sporulation protein YunB (Spo_YunB) M5E03_15100 PF08827 Domain of unknown function (DUF1805) M5E03_15105 PF02872 5'-nucleotidase, C-terminal domain M5E03_15110 PF01904 Protein of unknown function DUF72 M5E03_15115 PF07905 Purine catabolism regulatory protein-like family M5E03_15115 PF17853 GGDEF-like domain M5E03_15115 PF13556 PucR C-terminal helix-turn-helix domain M5E03_15120 PF00190 Cupin M5E03_15130 PF07690 Major Facilitator Superfamily M5E03_15135 PF00266 Aminotransferase class-V M5E03_15140 PF04231 Endonuclease I M5E03_15150 PF01032 FecCD transport family M5E03_15155 PF01032 FecCD transport family M5E03_15160 PF01497 Periplasmic binding protein M5E03_15170 PF07859 alpha/beta hydrolase fold M5E03_15180 PF06146 Phosphate-starvation-inducible E M5E03_15185 PF00512 His Kinase A (phospho-acceptor) domain M5E03_15190 PF00072 Response regulator receiver domain M5E03_15190 PF00486 Transcriptional regulatory protein, C terminal M5E03_15195 PF04235 Protein of unknown function (DUF418) M5E03_15215 PF18665 Tetracyclin repressor-like, C-terminal domain M5E03_15215 PF00440 Bacterial regulatory proteins, tetR family M5E03_15220 PF01458 Uncharacterized protein family (UPF0051) M5E03_15225 PF01592 NifU-like N terminal domain M5E03_15230 PF00266 Aminotransferase class-V M5E03_15235 PF01458 Uncharacterized protein family (UPF0051) M5E03_15240 PF00005 ABC transporter M5E03_15245 PF02627 Carboxymuconolactone decarboxylase family M5E03_15250 PF03180 NLPA lipoprotein M5E03_15255 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_15260 PF09383 NIL domain M5E03_15260 PF00005 ABC transporter M5E03_15265 PF02036 SCP-2 sterol transfer family M5E03_15270 PF00085 Thioredoxin M5E03_15275 PF01751 Toprim domain M5E03_15280 PF10830 Protein of unknown function (DUF2553) M5E03_15285 PF01597 Glycine cleavage H-protein M5E03_15290 PF03960 ArsC family M5E03_15295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5E03_15295 PF02770 Acyl-CoA dehydrogenase, middle domain M5E03_15295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5E03_15300 PF00108 Thiolase, N-terminal domain M5E03_15300 PF02803 Thiolase, C-terminal domain M5E03_15305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M5E03_15305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M5E03_15305 PF00378 Enoyl-CoA hydratase/isomerase M5E03_15310 PF14115 YuzL-like protein M5E03_15320 PF07875 Coat F domain M5E03_15325 PF10835 Protein of unknown function (DUF2573) M5E03_15330 PF00005 ABC transporter M5E03_15340 PF00106 short chain dehydrogenase M5E03_15345 PF13180 PDZ domain M5E03_15350 PF00486 Transcriptional regulatory protein, C terminal M5E03_15350 PF00072 Response regulator receiver domain M5E03_15355 PF00512 His Kinase A (phospho-acceptor) domain M5E03_15355 PF00672 HAMP domain M5E03_15355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_15365 PF00440 Bacterial regulatory proteins, tetR family M5E03_15370 PF10415 Fumarase C C-terminus M5E03_15370 PF00206 Lyase M5E03_15375 PF13113 Protein of unknown function (DUF3970) M5E03_15380 PF03323 Bacillus/Clostridium GerA spore germination protein M5E03_15385 PF03845 Spore germination protein M5E03_15390 PF05504 Spore germination B3/ GerAC like, C-terminal M5E03_15400 PF00072 Response regulator receiver domain M5E03_15400 PF00196 Bacterial regulatory proteins, luxR family M5E03_15405 PF00672 HAMP domain M5E03_15405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_15405 PF07730 Histidine kinase M5E03_15410 PF09922 Cell wall-active antibiotics response 4TMS YvqF M5E03_15420 PF04012 PspA/IM30 family M5E03_15430 PF01923 Cobalamin adenosyltransferase M5E03_15440 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M5E03_15445 PF07005 Sugar-binding N-terminal domain M5E03_15445 PF17042 Nucleotide-binding C-terminal domain M5E03_15450 PF00158 Sigma-54 interaction domain M5E03_15450 PF00072 Response regulator receiver domain M5E03_15450 PF02954 Bacterial regulatory protein, Fis family M5E03_15465 PF00465 Iron-containing alcohol dehydrogenase M5E03_15470 PF00701 Dihydrodipicolinate synthetase family M5E03_15475 PF00005 ABC transporter M5E03_15480 PF01032 FecCD transport family M5E03_15485 PF01497 Periplasmic binding protein M5E03_15490 PF00295 Glycosyl hydrolases family 28 M5E03_15495 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus M5E03_15495 PF08666 SAF domain M5E03_15500 PF01232 Mannitol dehydrogenase Rossmann domain M5E03_15500 PF08125 Mannitol dehydrogenase C-terminal domain M5E03_15505 PF00356 Bacterial regulatory proteins, lacI family M5E03_15510 PF02614 Glucuronate isomerase M5E03_15515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_15515 PF00512 His Kinase A (phospho-acceptor) domain M5E03_15520 PF00072 Response regulator receiver domain M5E03_15520 PF00486 Transcriptional regulatory protein, C terminal M5E03_15525 PF00005 ABC transporter M5E03_15530 PF01032 FecCD transport family M5E03_15535 PF01032 FecCD transport family M5E03_15540 PF01497 Periplasmic binding protein M5E03_15545 PF13520 Amino acid permease M5E03_15550 PF09575 Small spore protein J (Spore_SspJ) M5E03_15560 PF04307 LexA-binding, inner membrane-associated putative hydrolase M5E03_15565 PF00884 Sulfatase M5E03_15575 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_15580 PF00248 Aldo/keto reductase family M5E03_15585 PF00480 ROK family M5E03_15590 PF00999 Sodium/hydrogen exchanger family M5E03_15595 PF03458 UPF0126 domain M5E03_15600 PF02600 Disulfide bond formation protein DsbB M5E03_15605 PF13462 Thioredoxin M5E03_15610 PF00403 Heavy-metal-associated domain M5E03_15615 PF00005 ABC transporter M5E03_15620 PF00950 ABC 3 transport family M5E03_15625 PF01297 Zinc-uptake complex component A periplasmic M5E03_15635 PF13977 BetI-type transcriptional repressor, C-terminal M5E03_15635 PF00440 Bacterial regulatory proteins, tetR family M5E03_15640 PF08664 YcbB domain M5E03_15640 PF00072 Response regulator receiver domain M5E03_15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_15650 PF00206 Lyase M5E03_15650 PF10415 Fumarase C C-terminus M5E03_15655 PF00375 Sodium:dicarboxylate symporter family M5E03_15660 PF00403 Heavy-metal-associated domain M5E03_15665 PF00403 Heavy-metal-associated domain M5E03_15670 PF02583 Metal-sensitive transcriptional repressor M5E03_15680 PF00072 Response regulator receiver domain M5E03_15680 PF00990 Diguanylate cyclase, GGDEF domain M5E03_15695 PF01668 SmpB protein M5E03_15700 PF00773 RNB domain M5E03_15700 PF00575 S1 RNA binding domain M5E03_15700 PF17876 Cold shock domain M5E03_15700 PF08206 Ribonuclease B OB domain M5E03_15705 PF12146 Serine aminopeptidase, S33 M5E03_15710 PF03840 Preprotein translocase SecG subunit M5E03_15715 PF18277 AbrB C-terminal domain M5E03_15715 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin M5E03_15720 PF01381 Helix-turn-helix M5E03_15735 PF01638 HxlR-like helix-turn-helix M5E03_15740 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_15745 PF04069 Substrate binding domain of ABC-type glycine betaine transport system M5E03_15750 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_15755 PF00571 CBS domain M5E03_15755 PF00005 ABC transporter M5E03_15760 PF12802 MarR family M5E03_15765 PF01914 MarC family integral membrane protein M5E03_15775 PF00583 Acetyltransferase (GNAT) family M5E03_15795 PF00005 ABC transporter M5E03_15805 PF00113 Enolase, C-terminal TIM barrel domain M5E03_15805 PF03952 Enolase, N-terminal domain M5E03_15810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M5E03_15810 PF01676 Metalloenzyme superfamily M5E03_15815 PF00121 Triosephosphate isomerase M5E03_15820 PF00162 Phosphoglycerate kinase M5E03_15825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M5E03_15825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M5E03_15830 PF04198 Putative sugar-binding domain M5E03_15835 PF00324 Amino acid permease M5E03_15840 PF00202 Aminotransferase class-III M5E03_15845 PF13426 PAS domain M5E03_15845 PF00158 Sigma-54 interaction domain M5E03_15845 PF02954 Bacterial regulatory protein, Fis family M5E03_15850 PF07729 FCD domain M5E03_15850 PF00392 Bacterial regulatory proteins, gntR family M5E03_15855 PF00309 Sigma-54 factor, Activator interacting domain (AID) M5E03_15855 PF04963 Sigma-54 factor, core binding domain M5E03_15855 PF04552 Sigma-54, DNA binding domain M5E03_15860 PF09628 YvfG protein M5E03_15865 PF01554 MatE M5E03_15870 PF00005 ABC transporter M5E03_15875 PF00005 ABC transporter M5E03_15875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M5E03_15880 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_15885 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_15890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5E03_15895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M5E03_15900 PF00132 Bacterial transferase hexapeptide (six repeats) M5E03_15900 PF17836 PglD N-terminal domain M5E03_15905 PF02397 Bacterial sugar transferase M5E03_15910 PF14667 Polysaccharide biosynthesis C-terminal domain M5E03_15910 PF01943 Polysaccharide biosynthesis protein M5E03_15915 PF04230 Polysaccharide pyruvyl transferase M5E03_15920 PF00535 Glycosyl transferase family 2 M5E03_15930 PF00534 Glycosyl transferases group 1 M5E03_15930 PF13439 Glycosyltransferase Family 4 M5E03_15935 PF00535 Glycosyl transferase family 2 M5E03_15940 PF13439 Glycosyltransferase Family 4 M5E03_15940 PF00534 Glycosyl transferases group 1 M5E03_15945 PF02719 Polysaccharide biosynthesis protein M5E03_15950 PF13614 AAA domain M5E03_15955 PF02706 Chain length determinant protein M5E03_15960 PF08671 Anti-repressor SinI M5E03_15960 PF01381 Helix-turn-helix M5E03_15970 PF01497 Periplasmic binding protein M5E03_15975 PF01032 FecCD transport family M5E03_15980 PF01032 FecCD transport family M5E03_15985 PF01522 Polysaccharide deacetylase M5E03_15985 PF13739 Deacetylase PdaC M5E03_15985 PF11738 Protein of unknown function (DUF3298) M5E03_15990 PF00005 ABC transporter M5E03_15990 PF12848 ABC transporter M5E03_15995 PF00005 ABC transporter M5E03_16000 PF00005 ABC transporter M5E03_16005 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_16005 PF12911 N-terminal TM domain of oligopeptide transport permease C M5E03_16010 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_16015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M5E03_16020 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase M5E03_16025 PF01497 Periplasmic binding protein M5E03_16035 PF00574 Clp protease M5E03_16040 PF03641 Possible lysine decarboxylase M5E03_16045 PF03819 MazG nucleotide pyrophosphohydrolase domain M5E03_16050 PF01740 STAS domain M5E03_16050 PF00916 Sulfate permease family M5E03_16055 PF00484 Carbonic anhydrase M5E03_16060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M5E03_16060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M5E03_16065 PF00545 ribonuclease M5E03_16070 PF00797 N-acetyltransferase M5E03_16075 PF00381 PTS HPr component phosphorylation site M5E03_16080 PF02650 WhiA C-terminal HTH domain M5E03_16080 PF10298 WhiA N-terminal LAGLIDADG-like domain M5E03_16080 PF14527 WhiA LAGLIDADG-like domain M5E03_16085 PF01933 Uncharacterised protein family UPF0052 M5E03_16090 PF03668 P-loop ATPase protein family M5E03_16095 PF00293 NUDIX domain M5E03_16100 PF07992 Pyridine nucleotide-disulphide oxidoreductase M5E03_16105 PF00877 NlpC/P60 family M5E03_16115 PF01502 Phosphoribosyl-AMP cyclohydrolase M5E03_16115 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M5E03_16120 PF00977 Histidine biosynthesis protein M5E03_16125 PF00977 Histidine biosynthesis protein M5E03_16130 PF00117 Glutamine amidotransferase class-I M5E03_16135 PF00475 Imidazoleglycerol-phosphate dehydratase M5E03_16140 PF00815 Histidinol dehydrogenase M5E03_16145 PF01634 ATP phosphoribosyltransferase M5E03_16150 PF13393 Histidyl-tRNA synthetase M5E03_16155 PF13529 Peptidase_C39 like family M5E03_16170 PF13460 NAD(P)H-binding M5E03_16175 PF02082 Transcriptional regulator M5E03_16180 PF14602 Hexapeptide repeat of succinyl-transferase M5E03_16185 PF13419 Haloacid dehalogenase-like hydrolase M5E03_16190 PF07670 Nucleoside recognition M5E03_16195 PF01790 Prolipoprotein diacylglyceryl transferase M5E03_16200 PF02603 HPr Serine kinase N terminus M5E03_16200 PF07475 HPr Serine kinase C-terminal domain M5E03_16205 PF01979 Amidohydrolase family M5E03_16210 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M5E03_16215 PF00392 Bacterial regulatory proteins, gntR family M5E03_16215 PF07702 UTRA domain M5E03_16220 PF00149 Calcineurin-like phosphoesterase M5E03_16225 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV M5E03_16230 PF04024 PspC domain M5E03_16235 PF13349 Putative adhesin M5E03_16250 PF00005 ABC transporter M5E03_16250 PF17755 UvrA DNA-binding domain M5E03_16250 PF17760 UvrA interaction domain M5E03_16255 PF00271 Helicase conserved C-terminal domain M5E03_16255 PF04851 Type III restriction enzyme, res subunit M5E03_16255 PF02151 UvrB/uvrC motif M5E03_16255 PF12344 Ultra-violet resistance protein B M5E03_16255 PF17757 UvrB interaction domain M5E03_16260 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) M5E03_16265 PF00391 PEP-utilising enzyme, mobile domain M5E03_16265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain M5E03_16270 PF00440 Bacterial regulatory proteins, tetR family M5E03_16275 PF07690 Major Facilitator Superfamily M5E03_16285 PF00486 Transcriptional regulatory protein, C terminal M5E03_16285 PF00072 Response regulator receiver domain M5E03_16290 PF00512 His Kinase A (phospho-acceptor) domain M5E03_16290 PF00989 PAS fold M5E03_16290 PF16736 Single Cache-like M5E03_16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_16295 PF00324 Amino acid permease M5E03_16300 PF00881 Nitroreductase family M5E03_16305 PF01638 HxlR-like helix-turn-helix M5E03_16310 PF17820 PDZ domain M5E03_16315 PF17423 Swarming motility protein M5E03_16320 PF03572 Peptidase family S41 M5E03_16320 PF01471 Putative peptidoglycan binding domain M5E03_16320 PF17820 PDZ domain M5E03_16325 PF01925 Sulfite exporter TauE/SafE M5E03_16330 PF00877 NlpC/P60 family M5E03_16335 PF18075 FtsX extracellular domain M5E03_16335 PF02687 FtsX-like permease family M5E03_16340 PF00005 ABC transporter M5E03_16345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M5E03_16350 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M5E03_16350 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M5E03_16370 PF01043 SecA preprotein cross-linking domain M5E03_16370 PF07516 SecA Wing and Scaffold domain M5E03_16370 PF02810 SEC-C motif M5E03_16370 PF07517 SecA DEAD-like domain M5E03_16375 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus M5E03_16375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M5E03_16380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_16380 PF00672 HAMP domain M5E03_16380 PF02743 Cache domain M5E03_16395 PF02561 Flagellar protein FliS M5E03_16400 PF07196 Flagellin hook IN motif M5E03_16400 PF07195 Flagellar hook-associated protein 2 C-terminus M5E03_16400 PF02465 Flagellar hook-associated protein 2 N-terminus M5E03_16405 PF03646 FlaG protein M5E03_16410 PF02599 Global regulator protein family M5E03_16415 PF02623 FliW protein M5E03_16425 PF00700 Bacterial flagellin C-terminal helical region M5E03_16425 PF00669 Bacterial flagellin N-terminal helical region M5E03_16430 PF00460 Flagella basal body rod protein M5E03_16430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5E03_16435 PF05130 FlgN protein M5E03_16455 PF10719 Late competence development protein ComFB M5E03_16460 PF00271 Helicase conserved C-terminal domain M5E03_16460 PF04851 Type III restriction enzyme, res subunit M5E03_16465 PF02645 Uncharacterised protein, DegV family COG1307 M5E03_16470 PF00196 Bacterial regulatory proteins, luxR family M5E03_16470 PF00072 Response regulator receiver domain M5E03_16475 PF07730 Histidine kinase M5E03_16475 PF05384 Sensor protein DegS M5E03_16475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_16480 PF01205 Uncharacterized protein family UPF0029 M5E03_16480 PF09186 Domain of unknown function (DUF1949) M5E03_16485 PF03816 Cell envelope-related transcriptional attenuator domain M5E03_16490 PF00953 Glycosyl transferase family 4 M5E03_16500 PF00535 Glycosyl transferase family 2 M5E03_16505 PF02706 Chain length determinant protein M5E03_16510 PF04932 O-Antigen ligase M5E03_16515 PF16363 GDP-mannose 4,6 dehydratase M5E03_16520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M5E03_16520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M5E03_16520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M5E03_16525 PF00534 Glycosyl transferases group 1 M5E03_16525 PF13439 Glycosyltransferase Family 4 M5E03_16530 PF01943 Polysaccharide biosynthesis protein M5E03_16530 PF14667 Polysaccharide biosynthesis C-terminal domain M5E03_16535 PF02397 Bacterial sugar transferase M5E03_16545 PF01520 N-acetylmuramoyl-L-alanine amidase M5E03_16545 PF04122 Putative cell wall binding repeat 2 M5E03_16550 PF01520 N-acetylmuramoyl-L-alanine amidase M5E03_16550 PF04122 Putative cell wall binding repeat 2 M5E03_16555 PF04122 Putative cell wall binding repeat 2 M5E03_16555 PF08486 Stage II sporulation protein M5E03_16565 PF03816 Cell envelope-related transcriptional attenuator domain M5E03_16570 PF02350 UDP-N-acetylglucosamine 2-epimerase M5E03_16575 PF00483 Nucleotidyl transferase M5E03_16580 PF00005 ABC transporter M5E03_16585 PF01061 ABC-2 type transporter M5E03_16590 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M5E03_16595 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M5E03_16605 PF01467 Cytidylyltransferase-like M5E03_16610 PF03808 Glycosyl transferase WecB/TagA/CpsF family M5E03_16615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M5E03_16620 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M5E03_16620 PF08239 Bacterial SH3 domain M5E03_16620 PF05036 Sporulation related domain M5E03_16625 PF01238 Phosphomannose isomerase type I M5E03_16630 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_16635 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_16640 PF01547 Bacterial extracellular solute-binding protein M5E03_16645 PF00196 Bacterial regulatory proteins, luxR family M5E03_16645 PF00072 Response regulator receiver domain M5E03_16650 PF00672 HAMP domain M5E03_16650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_16650 PF06580 Histidine kinase M5E03_16650 PF02743 Cache domain M5E03_16660 PF00583 Acetyltransferase (GNAT) family M5E03_16665 PF01081 KDPG and KHG aldolase M5E03_16670 PF00294 pfkB family carbohydrate kinase M5E03_16675 PF00356 Bacterial regulatory proteins, lacI family M5E03_16680 PF04962 KduI/IolB family M5E03_16690 PF03323 Bacillus/Clostridium GerA spore germination protein M5E03_16695 PF03845 Spore germination protein M5E03_16700 PF05504 Spore germination B3/ GerAC like, C-terminal M5E03_16705 PF00535 Glycosyl transferase family 2 M5E03_16710 PF00083 Sugar (and other) transporter M5E03_16715 PF03816 Cell envelope-related transcriptional attenuator domain M5E03_16725 PF00877 NlpC/P60 family M5E03_16735 PF09587 Bacterial capsule synthesis protein PGA_cap M5E03_16740 PF14102 Capsule biosynthesis CapC M5E03_16750 PF03323 Bacillus/Clostridium GerA spore germination protein M5E03_16760 PF05504 Spore germination B3/ GerAC like, C-terminal M5E03_16765 PF00356 Bacterial regulatory proteins, lacI family M5E03_16770 PF00294 pfkB family carbohydrate kinase M5E03_16775 PF05025 RbsD / FucU transport protein family M5E03_16780 PF00005 ABC transporter M5E03_16785 PF02653 Branched-chain amino acid transport system / permease component M5E03_16790 PF13407 Periplasmic binding protein domain M5E03_16795 PF01613 Flavin reductase like domain M5E03_16800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_16800 PF03466 LysR substrate binding domain M5E03_16805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M5E03_16805 PF00205 Thiamine pyrophosphate enzyme, central domain M5E03_16805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M5E03_16810 PF03306 Alpha-acetolactate decarboxylase M5E03_16815 PF13404 AsnC-type helix-turn-helix domain M5E03_16815 PF01037 Lrp/AsnC ligand binding domain M5E03_16820 PF02417 Chromate transporter M5E03_16825 PF02417 Chromate transporter M5E03_16830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M5E03_16830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M5E03_16830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M5E03_16840 PF04434 SWIM zinc finger M5E03_16845 PF00176 SNF2 family N-terminal domain M5E03_16845 PF12419 SNF2 Helicase protein M5E03_16845 PF00271 Helicase conserved C-terminal domain M5E03_16850 PF01740 STAS domain M5E03_16850 PF13426 PAS domain M5E03_16865 PF14183 YwpF-like protein M5E03_16870 PF01741 Large-conductance mechanosensitive channel, MscL M5E03_16875 PF07977 FabA-like domain M5E03_16880 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_16885 PF00460 Flagella basal body rod protein M5E03_16885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5E03_16890 PF00460 Flagella basal body rod protein M5E03_16890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M5E03_16900 PF12116 Stage III sporulation protein D M5E03_16905 PF01047 MarR family M5E03_16910 PF07690 Major Facilitator Superfamily M5E03_16915 PF01569 PAP2 superfamily M5E03_16920 PF07690 Major Facilitator Superfamily M5E03_16925 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_16930 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_16935 PF00005 ABC transporter M5E03_16940 PF00909 Ammonium Transporter Family M5E03_16945 PF00543 Nitrogen regulatory protein P-II M5E03_16950 PF01551 Peptidase family M23 M5E03_16955 PF00583 Acetyltransferase (GNAT) family M5E03_16965 PF00471 Ribosomal protein L33 M5E03_16970 PF02492 CobW/HypB/UreG, nucleotide-binding domain M5E03_16970 PF07683 Cobalamin synthesis protein cobW C-terminal domain M5E03_16975 PF00253 Ribosomal protein S14p/S29e M5E03_16980 PF06463 Molybdenum Cofactor Synthesis C M5E03_16980 PF04055 Radical SAM superfamily M5E03_16985 PF02634 FdhD/NarQ family M5E03_16990 PF07690 Major Facilitator Superfamily M5E03_16995 PF00384 Molybdopterin oxidoreductase M5E03_17000 PF00092 von Willebrand factor type A domain M5E03_17005 PF00092 von Willebrand factor type A domain M5E03_17010 PF08486 Stage II sporulation protein M5E03_17015 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M5E03_17020 PF08680 TATA-box binding M5E03_17025 PF06612 Protein of unknown function (DUF1146) M5E03_17035 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M5E03_17035 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M5E03_17040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5E03_17040 PF02874 ATP synthase alpha/beta family, beta-barrel domain M5E03_17045 PF00231 ATP synthase M5E03_17050 PF02874 ATP synthase alpha/beta family, beta-barrel domain M5E03_17050 PF00306 ATP synthase alpha/beta chain, C terminal domain M5E03_17050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5E03_17055 PF00213 ATP synthase delta (OSCP) subunit M5E03_17060 PF00430 ATP synthase B/B' CF(0) M5E03_17065 PF00137 ATP synthase subunit C M5E03_17070 PF00119 ATP synthase A chain M5E03_17075 PF03899 ATP synthase I chain M5E03_17085 PF00464 Serine hydroxymethyltransferase M5E03_17090 PF04260 Protein of unknown function (DUF436) M5E03_17095 PF02502 Ribose/Galactose Isomerase M5E03_17100 PF01451 Low molecular weight phosphotyrosine protein phosphatase M5E03_17105 PF02659 Putative manganese efflux pump M5E03_17110 PF03481 Putative GTP-binding controlling metal-binding M5E03_17110 PF01300 Telomere recombination M5E03_17120 PF09551 Stage II sporulation protein R (spore_II_R) M5E03_17130 PF05175 Methyltransferase small domain M5E03_17130 PF17827 PrmC N-terminal domain M5E03_17135 PF03462 PCRF domain M5E03_17135 PF00472 RF-1 domain M5E03_17140 PF13411 MerR HTH family regulatory protein M5E03_17145 PF03547 Membrane transport protein M5E03_17150 PF00390 Malic enzyme, N-terminal domain M5E03_17150 PF03949 Malic enzyme, NAD binding domain M5E03_17155 PF00265 Thymidine kinase M5E03_17160 PF01197 Ribosomal protein L31 M5E03_17165 PF07497 Rho termination factor, RNA-binding domain M5E03_17165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M5E03_17165 PF07498 Rho termination factor, N-terminal domain M5E03_17170 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M5E03_17175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M5E03_17180 PF00923 Transaldolase/Fructose-6-phosphate aldolase M5E03_17185 PF01116 Fructose-bisphosphate aldolase class-II M5E03_17190 PF00072 Response regulator receiver domain M5E03_17195 PF10740 Domain of unknown function (DUF2529) M5E03_17200 PF06418 CTP synthase N-terminus M5E03_17200 PF00117 Glutamine amidotransferase class-I M5E03_17205 PF05066 HB1, ASXL, restriction endonuclease HTH domain M5E03_17215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5E03_17215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5E03_17215 PF02770 Acyl-CoA dehydrogenase, middle domain M5E03_17220 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M5E03_17220 PF02770 Acyl-CoA dehydrogenase, middle domain M5E03_17220 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M5E03_17225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M5E03_17225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M5E03_17230 PF02803 Thiolase, C-terminal domain M5E03_17230 PF00108 Thiolase, N-terminal domain M5E03_17235 PF02754 Cysteine-rich domain M5E03_17235 PF13183 4Fe-4S dicluster domain M5E03_17240 PF13091 PLD-like domain M5E03_17245 PF03851 UV-endonuclease UvdE M5E03_17255 PF02016 LD-carboxypeptidase N-terminal domain M5E03_17255 PF17676 LD-carboxypeptidase C-terminal domain M5E03_17265 PF00664 ABC transporter transmembrane region M5E03_17265 PF00005 ABC transporter M5E03_17270 PF13396 Phospholipase_D-nuclease N-terminal M5E03_17270 PF13091 PLD-like domain M5E03_17275 PF02016 LD-carboxypeptidase N-terminal domain M5E03_17275 PF17676 LD-carboxypeptidase C-terminal domain M5E03_17285 PF03485 Arginyl tRNA synthetase N terminal domain M5E03_17285 PF05746 DALR anticodon binding domain M5E03_17285 PF00750 tRNA synthetases class I (R) M5E03_17290 PF09148 Domain of unknown function (DUF1934) M5E03_17300 PF00491 Arginase family M5E03_17305 PF17284 Spermidine synthase tetramerisation domain M5E03_17310 PF00905 Penicillin binding protein transpeptidase domain M5E03_17310 PF00912 Transglycosylase M5E03_17315 PF08741 YwhD family M5E03_17320 PF02163 Peptidase family M50 M5E03_17325 PF01361 Tautomerase enzyme M5E03_17355 PF00296 Luciferase-like monooxygenase M5E03_17360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_17360 PF03466 LysR substrate binding domain M5E03_17365 PF03358 NADPH-dependent FMN reductase M5E03_17370 PF00296 Luciferase-like monooxygenase M5E03_17375 PF00462 Glutaredoxin M5E03_17380 PF00583 Acetyltransferase (GNAT) family M5E03_17385 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_17390 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_17395 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_17400 PF00005 ABC transporter M5E03_17410 PF01966 HD domain M5E03_17415 PF07293 Protein of unknown function (DUF1450) M5E03_17430 PF00535 Glycosyl transferase family 2 M5E03_17430 PF07238 PilZ domain M5E03_17440 PF03099 Biotin/lipoate A/B protein ligase family M5E03_17495 PF03737 Aldolase/RraA M5E03_17505 PF01515 Phosphate acetyl/butaryl transferase M5E03_17510 PF06778 Chlorite dismutase M5E03_17520 PF01037 Lrp/AsnC ligand binding domain M5E03_17525 PF07690 Major Facilitator Superfamily M5E03_17535 PF07883 Cupin domain M5E03_17550 PF00155 Aminotransferase class I and II M5E03_17560 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase M5E03_17565 PF04321 RmlD substrate binding domain M5E03_17570 PF16363 GDP-mannose 4,6 dehydratase M5E03_17575 PF00483 Nucleotidyl transferase M5E03_17580 PF04101 Glycosyltransferase family 28 C-terminal domain M5E03_17585 PF02348 Cytidylyltransferase M5E03_17590 PF03102 NeuB family M5E03_17590 PF08666 SAF domain M5E03_17595 PF00583 Acetyltransferase (GNAT) family M5E03_17600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family M5E03_17605 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase M5E03_17610 PF00535 Glycosyl transferase family 2 M5E03_17620 PF09671 Spore coat protein (Spore_GerQ) M5E03_17630 PF04241 Protein of unknown function (DUF423) M5E03_17635 PF00860 Permease family M5E03_17640 PF17261 Family of unknown function (DUF5327) M5E03_17645 PF00171 Aldehyde dehydrogenase family M5E03_17650 PF03167 Uracil DNA glycosylase superfamily M5E03_17655 PF00535 Glycosyl transferase family 2 M5E03_17665 PF08543 Phosphomethylpyrimidine kinase M5E03_17680 PF08244 Glycosyl hydrolases family 32 C terminal M5E03_17680 PF00251 Glycosyl hydrolases family 32 N-terminal domain M5E03_17685 PF00367 phosphotransferase system, EIIB M5E03_17685 PF02378 Phosphotransferase system, EIIC M5E03_17690 PF03123 CAT RNA binding domain M5E03_17690 PF00874 PRD domain M5E03_17700 PF13860 FlgD Ig-like domain M5E03_17700 PF05922 Peptidase inhibitor I9 M5E03_17700 PF02225 PA domain M5E03_17700 PF00082 Subtilase family M5E03_17705 PF00296 Luciferase-like monooxygenase M5E03_17710 PF00881 Nitroreductase family M5E03_17715 PF01098 Cell cycle protein M5E03_17720 PF17368 Spore morphogenesis and germination YwcE M5E03_17725 PF03626 Prokaryotic Cytochrome C oxidase subunit IV M5E03_17730 PF00510 Cytochrome c oxidase subunit III M5E03_17735 PF00115 Cytochrome C and Quinol oxidase polypeptide I M5E03_17740 PF00116 Cytochrome C oxidase subunit II, periplasmic domain M5E03_17740 PF02790 Cytochrome C oxidase subunit II, transmembrane domain M5E03_17750 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M5E03_17750 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M5E03_17755 PF16363 GDP-mannose 4,6 dehydratase M5E03_17760 PF10509 Galactokinase galactose-binding signature M5E03_17760 PF08544 GHMP kinases C terminal M5E03_17760 PF00288 GHMP kinases N terminal domain M5E03_17775 PF04138 GtrA-like protein M5E03_17795 PF04341 Protein of unknown function, DUF485 M5E03_17800 PF00474 Sodium:solute symporter family M5E03_17810 PF02581 Thiamine monophosphate synthase M5E03_17815 PF02110 Hydroxyethylthiazole kinase family M5E03_17820 PF03466 LysR substrate binding domain M5E03_17820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_17825 PF03788 LrgA family M5E03_17830 PF04172 LrgB-like family M5E03_17835 PF10672 S-adenosylmethionine-dependent methyltransferase M5E03_17835 PF17785 PUA-like domain M5E03_17840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5E03_17845 PF00005 ABC transporter M5E03_17850 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_17855 PF00497 Bacterial extracellular solute-binding proteins, family 3 M5E03_17860 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_17870 PF04607 Region found in RelA / SpoT proteins M5E03_17875 PF02653 Branched-chain amino acid transport system / permease component M5E03_17880 PF00005 ABC transporter M5E03_17885 PF13407 Periplasmic binding protein domain M5E03_17890 PF13229 Right handed beta helix region M5E03_17895 PF01063 Amino-transferase class IV M5E03_17905 PF02056 Family 4 glycosyl hydrolase M5E03_17905 PF11975 Family 4 glycosyl hydrolase C-terminal domain M5E03_17910 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M5E03_17915 PF02378 Phosphotransferase system, EIIC M5E03_17920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_17925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_17925 PF00874 PRD domain M5E03_17925 PF05043 Mga helix-turn-helix domain M5E03_17925 PF08279 HTH domain M5E03_17945 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase M5E03_17945 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain M5E03_17960 PF08281 Sigma-70, region 4 M5E03_17960 PF04542 Sigma-70 region 2 M5E03_17965 PF00544 Pectate lyase M5E03_17970 PF00664 ABC transporter transmembrane region M5E03_17970 PF00005 ABC transporter M5E03_17975 PF00664 ABC transporter transmembrane region M5E03_17975 PF00005 ABC transporter M5E03_17980 PF02322 Cytochrome bd terminal oxidase subunit II M5E03_17985 PF01654 Cytochrome bd terminal oxidase subunit I M5E03_17990 PF03992 Antibiotic biosynthesis monooxygenase M5E03_18000 PF01032 FecCD transport family M5E03_18010 PF04203 Sortase domain M5E03_18015 PF00005 ABC transporter M5E03_18020 PF01032 FecCD transport family M5E03_18025 PF01497 Periplasmic binding protein M5E03_18035 PF05031 Iron Transport-associated domain M5E03_18040 PF05031 Iron Transport-associated domain M5E03_18045 PF01638 HxlR-like helix-turn-helix M5E03_18050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5E03_18055 PF00925 GTP cyclohydrolase II M5E03_18055 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M5E03_18060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M5E03_18060 PF01872 RibD C-terminal domain M5E03_18070 PF01522 Polysaccharide deacetylase M5E03_18075 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M5E03_18080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M5E03_18085 PF00232 Glycosyl hydrolase family 1 M5E03_18090 PF02378 Phosphotransferase system, EIIC M5E03_18095 PF08279 HTH domain M5E03_18095 PF05043 Mga helix-turn-helix domain M5E03_18095 PF00874 PRD domain M5E03_18095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M5E03_18120 PF03553 Na+/H+ antiporter family M5E03_18125 PF00206 Lyase M5E03_18125 PF10415 Fumarase C C-terminus M5E03_18130 PF00710 Asparaginase, N-terminal M5E03_18130 PF17763 Glutaminase/Asparaginase C-terminal domain M5E03_18135 PF01381 Helix-turn-helix M5E03_18145 PF17353 Family of unknown function (DUF5381) M5E03_18160 PF06013 Proteins of 100 residues with WXG M5E03_18165 PF01546 Peptidase family M20/M25/M40 M5E03_18165 PF07687 Peptidase dimerisation domain M5E03_18180 PF01717 Cobalamin-independent synthase, Catalytic domain M5E03_18185 PF00232 Glycosyl hydrolase family 1 M5E03_18190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5E03_18190 PF00367 phosphotransferase system, EIIB M5E03_18190 PF02378 Phosphotransferase system, EIIC M5E03_18195 PF00874 PRD domain M5E03_18195 PF03123 CAT RNA binding domain M5E03_18200 PF09234 Domain of unknown function (DUF1963) M5E03_18210 PF02361 Cobalt transport protein M5E03_18215 PF00005 ABC transporter M5E03_18220 PF09819 ABC-type cobalt transport system, permease component M5E03_18225 PF03070 TENA/THI-4/PQQC family M5E03_18255 PF05547 Immune inhibitor A peptidase M6 M5E03_18255 PF00801 PKD domain M5E03_18260 PF03992 Antibiotic biosynthesis monooxygenase M5E03_18265 PF00881 Nitroreductase family M5E03_18275 PF02885 Glycosyl transferase family, helical bundle domain M5E03_18275 PF00591 Glycosyl transferase family, a/b domain M5E03_18275 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M5E03_18280 PF07662 Na+ dependent nucleoside transporter C-terminus M5E03_18280 PF01773 Na+ dependent nucleoside transporter N-terminus M5E03_18285 PF01791 DeoC/LacD family aldolase M5E03_18290 PF04198 Putative sugar-binding domain M5E03_18300 PF01757 Acyltransferase family M5E03_18310 PF08241 Methyltransferase domain M5E03_18315 PF00196 Bacterial regulatory proteins, luxR family M5E03_18315 PF00072 Response regulator receiver domain M5E03_18325 PF13411 MerR HTH family regulatory protein M5E03_18330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold M5E03_18335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M5E03_18340 PF00324 Amino acid permease M5E03_18345 PF08713 DNA alkylation repair enzyme M5E03_18350 PF02447 GntP family permease M5E03_18355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M5E03_18355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M5E03_18360 PF01380 SIS domain M5E03_18360 PF01418 Helix-turn-helix domain, rpiR family M5E03_18380 PF03466 LysR substrate binding domain M5E03_18380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_18385 PF00356 Bacterial regulatory proteins, lacI family M5E03_18390 PF13416 Bacterial extracellular solute-binding protein M5E03_18395 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_18400 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_18405 PF07745 Glycosyl hydrolase family 53 M5E03_18410 PF08533 Beta-galactosidase C-terminal domain M5E03_18410 PF08532 Beta-galactosidase trimerisation domain M5E03_18410 PF02449 Beta-galactosidase M5E03_18415 PF03600 Citrate transporter M5E03_18425 PF12679 ABC-2 family transporter protein M5E03_18430 PF00005 ABC transporter M5E03_18435 PF03831 PhnA domain M5E03_18435 PF08274 PhnA Zinc-Ribbon M5E03_18440 PF02595 Glycerate kinase family M5E03_18445 PF02447 GntP family permease M5E03_18450 PF05651 Putative sugar diacid recognition M5E03_18450 PF17853 GGDEF-like domain M5E03_18450 PF13556 PucR C-terminal helix-turn-helix domain M5E03_18455 PF17922 Tetracyclin repressor-like, C-terminal domain M5E03_18455 PF00440 Bacterial regulatory proteins, tetR family M5E03_18460 PF07690 Major Facilitator Superfamily M5E03_18470 PF12704 MacB-like periplasmic core domain M5E03_18470 PF00005 ABC transporter M5E03_18470 PF02687 FtsX-like permease family M5E03_18475 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_18480 PF03123 CAT RNA binding domain M5E03_18480 PF00874 PRD domain M5E03_18485 PF00232 Glycosyl hydrolase family 1 M5E03_18490 PF00367 phosphotransferase system, EIIB M5E03_18490 PF02378 Phosphotransferase system, EIIC M5E03_18490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5E03_18510 PF00293 NUDIX domain M5E03_18525 PF00324 Amino acid permease M5E03_18530 PF00356 Bacterial regulatory proteins, lacI family M5E03_18535 PF07690 Major Facilitator Superfamily M5E03_18540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M5E03_18540 PF08501 Shikimate dehydrogenase substrate binding domain M5E03_18545 PF07690 Major Facilitator Superfamily M5E03_18565 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues M5E03_18565 PF04740 LXG domain of WXG superfamily M5E03_18565 PF14449 Pre-toxin TG M5E03_18580 PF00232 Glycosyl hydrolase family 1 M5E03_18585 PF00367 phosphotransferase system, EIIB M5E03_18585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M5E03_18585 PF02378 Phosphotransferase system, EIIC M5E03_18590 PF00392 Bacterial regulatory proteins, gntR family M5E03_18590 PF07702 UTRA domain M5E03_18600 PF02567 Phenazine biosynthesis-like protein M5E03_18605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M5E03_18605 PF03466 LysR substrate binding domain M5E03_18625 PF13545 Crp-like helix-turn-helix domain M5E03_18625 PF00027 Cyclic nucleotide-binding domain M5E03_18635 PF07690 Major Facilitator Superfamily M5E03_18660 PF02590 Predicted SPOUT methyltransferase M5E03_18665 PF14116 YyzF-like protein M5E03_18670 PF02361 Cobalt transport protein M5E03_18675 PF00005 ABC transporter M5E03_18675 PF12558 ATP-binding cassette cobalt transporter M5E03_18680 PF07155 ECF-type riboflavin transporter, S component M5E03_18695 PF00005 ABC transporter M5E03_18700 PF00583 Acetyltransferase (GNAT) family M5E03_18705 PF13180 PDZ domain M5E03_18710 PF00753 Metallo-beta-lactamase superfamily M5E03_18715 PF09648 YycH protein M5E03_18720 PF07435 YycH protein M5E03_18725 PF00672 HAMP domain M5E03_18725 PF00512 His Kinase A (phospho-acceptor) domain M5E03_18725 PF13426 PAS domain M5E03_18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M5E03_18730 PF00072 Response regulator receiver domain M5E03_18730 PF00486 Transcriptional regulatory protein, C terminal M5E03_18755 PF00578 AhpC/TSA family M5E03_18765 PF04235 Protein of unknown function (DUF418) M5E03_18770 PF00709 Adenylosuccinate synthetase M5E03_18775 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5E03_18780 PF00772 DnaB-like helicase N terminal domain M5E03_18780 PF03796 DnaB-like helicase C terminal domain M5E03_18785 PF16226 Domain of unknown function (DUF4885) M5E03_18800 PF00756 Putative esterase M5E03_18805 PF00106 short chain dehydrogenase M5E03_18810 PF00425 chorismate binding enzyme M5E03_18815 PF13193 AMP-binding enzyme C-terminal domain M5E03_18815 PF00501 AMP-binding enzyme M5E03_18820 PF00550 Phosphopantetheine attachment site M5E03_18820 PF00857 Isochorismatase family M5E03_18825 PF00550 Phosphopantetheine attachment site M5E03_18825 PF00501 AMP-binding enzyme M5E03_18825 PF13193 AMP-binding enzyme C-terminal domain M5E03_18825 PF00668 Condensation domain M5E03_18825 PF00975 Thioesterase domain M5E03_18830 PF03621 MbtH-like protein M5E03_18835 PF01497 Periplasmic binding protein M5E03_18835 PF12833 Helix-turn-helix domain M5E03_18840 PF01497 Periplasmic binding protein M5E03_18845 PF00756 Putative esterase M5E03_18850 PF14174 YycC-like protein M5E03_18855 PF07690 Major Facilitator Superfamily M5E03_18860 PF01281 Ribosomal protein L9, N-terminal domain M5E03_18860 PF03948 Ribosomal protein L9, C-terminal domain M5E03_18865 PF02272 DHHA1 domain M5E03_18865 PF01368 DHH family M5E03_18870 PF09991 Predicted membrane protein (DUF2232) M5E03_18875 PF02833 DHHA2 domain M5E03_18875 PF01368 DHH family M5E03_18880 PF13739 Deacetylase PdaC M5E03_18880 PF11738 Protein of unknown function (DUF3298) M5E03_18885 PF08281 Sigma-70, region 4 M5E03_18885 PF04542 Sigma-70 region 2 M5E03_18895 PF06628 Catalase-related immune-responsive M5E03_18895 PF00199 Catalase M5E03_18900 PF03358 NADPH-dependent FMN reductase M5E03_18905 PF01738 Dienelactone hydrolase family M5E03_18910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M5E03_18915 PF00528 Binding-protein-dependent transport system inner membrane component M5E03_18920 PF00571 CBS domain M5E03_18920 PF00005 ABC transporter M5E03_18925 PF01084 Ribosomal protein S18 M5E03_18930 PF00436 Single-strand binding protein family M5E03_18935 PF01250 Ribosomal protein S6 M5E03_18940 PF01926 50S ribosome-binding GTPase M5E03_18940 PF06071 Protein of unknown function (DUF933) M5E03_18945 PF06107 Bacterial protein of unknown function (DUF951) M5E03_18965 PF06866 Protein of unknown function (DUF1256) M5E03_18970 PF17762 HTH domain found in ParB protein M5E03_18970 PF02195 ParB-like nuclease domain M5E03_18975 PF13614 AAA domain M5E03_18980 PF17762 HTH domain found in ParB protein M5E03_18980 PF02195 ParB-like nuclease domain M5E03_18985 PF02527 rRNA small subunit methyltransferase G M5E03_18990 PF13932 GidA associated domain M5E03_18990 PF01134 Glucose inhibited division protein A M5E03_18995 PF01926 50S ribosome-binding GTPase M5E03_18995 PF12631 MnmE helical domain M5E03_18995 PF10396 GTP-binding protein TrmE N-terminus M5E03_19000 PF14804 Jag N-terminus M5E03_19000 PF01424 R3H domain M5E03_19005 PF02096 60Kd inner membrane protein M5E03_19010 PF00825 Ribonuclease P M5E03_19015 PF00468 Ribosomal protein L34 M5E03_19030 PF13152 Protein of unknown function (DUF3967) M5E03_19030 PF13411 MerR HTH family regulatory protein M5E03_19040 PF18801 response regulator aspartate phosphatase H, N terminal M5E03_19040 PF13181 Tetratricopeptide repeat M5E03_19045 PF01446 Replication protein