BRL64_00005 SM00382 ATPases associated with a variety of cellular activities BRL64_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BRL64_00010 SM00480 DNA polymerase III beta subunit BRL64_00030 SM00387 Histidine kinase-like ATPases BRL64_00030 SM00433 TopoisomeraseII BRL64_00035 SM00434 DNA Topoisomerase IV BRL64_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_00070 SM01240 BRL64_00070 BRL64_00075 SM00936 Penicillin-binding protein 5, C-terminal domain BRL64_00080 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_00100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_00120 SM00257 Lysin motif BRL64_00120 SM00636 BRL64_00120 BRL64_00140 SM00382 ATPases associated with a variety of cellular activities BRL64_00150 SM00493 BRL64_00150 BRL64_00245 SM00465 GIY-YIG type nucleases (URI domain) BRL64_00255 SM00966 SpoVT / AbrB like domain BRL64_00270 SM01208 BRL64_00270 BRL64_00275 SM00493 BRL64_00275 BRL64_00280 SM00650 Ribosomal RNA adenine dimethylases BRL64_00325 SM01400 BRL64_00325 BRL64_00345 SM00487 DEAD-like helicases superfamily BRL64_00345 SM00490 helicase superfamily c-terminal domain BRL64_00345 SM00982 BRL64_00345 BRL64_00345 SM01058 CarD-like/TRCF domain BRL64_00350 SM00966 SpoVT / AbrB like domain BRL64_00365 SM00363 S4 RNA-binding domain BRL64_00385 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_00400 SM00331 Sigma factor PP2C-like phosphatases BRL64_00400 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRL64_00410 SM00220 Serine/Threonine protein kinases, catalytic domain BRL64_00415 SM00977 TilS substrate C-terminal domain BRL64_00425 SM00382 ATPases associated with a variety of cellular activities BRL64_00470 SM00905 Dihydroneopterin aldolase BRL64_00480 SM00530 Helix-turn-helix XRE-family like proteins BRL64_00610 SM00382 ATPases associated with a variety of cellular activities BRL64_00610 SM01086 C-terminal, D2-small domain, of ClpB protein BRL64_00615 SM00382 ATPases associated with a variety of cellular activities BRL64_00625 SM00670 Large family of predicted nucleotide-binding domains BRL64_00650 SM00840 BRL64_00650 BRL64_00655 SM00535 Ribonuclease III family BRL64_00660 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRL64_00680 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BRL64_00680 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRL64_00685 SM00649 Ribosomal protein L11/L12 BRL64_00715 SM00663 RNA polymerase I subunit A N-terminus BRL64_00735 SM00838 Elongation factor G C-terminus BRL64_00735 SM00889 Elongation factor G, domain IV BRL64_00750 SM01403 BRL64_00750 BRL64_00770 SM01382 BRL64_00770 BRL64_00770 SM01383 BRL64_00770 BRL64_00785 SM00322 K homology RNA-binding domain BRL64_00805 SM01374 BRL64_00805 BRL64_00810 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRL64_00870 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_00890 SM00662 RNA polymerases D BRL64_00900 SM00382 ATPases associated with a variety of cellular activities BRL64_00905 SM00382 ATPases associated with a variety of cellular activities BRL64_00960 SM00646 BRL64_00960 BRL64_00975 SM01251 BRL64_00975 BRL64_01135 SM00382 ATPases associated with a variety of cellular activities BRL64_01150 SM00382 ATPases associated with a variety of cellular activities BRL64_01170 SM00382 ATPases associated with a variety of cellular activities BRL64_01220 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_01225 SM00382 ATPases associated with a variety of cellular activities BRL64_01265 SM00825 Beta-ketoacyl synthase BRL64_01270 SM00530 Helix-turn-helix XRE-family like proteins BRL64_01285 SM00450 Rhodanese Homology Domain BRL64_01290 SM00450 Rhodanese Homology Domain BRL64_01295 SM00450 Rhodanese Homology Domain BRL64_01295 SM00849 Metallo-beta-lactamase superfamily BRL64_01310 SM00946 Prolyl-tRNA synthetase, C-terminal BRL64_01325 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_01355 SM00450 Rhodanese Homology Domain BRL64_01370 SM01061 CAT RNA binding domain BRL64_01410 SM00872 Alpha mannosidase, middle domain BRL64_01510 SM00829 Enoylreductase BRL64_01515 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_01550 SM00387 Histidine kinase-like ATPases BRL64_01555 SM00448 cheY-homologous receiver domain BRL64_01570 SM00421 helix_turn_helix, Lux Regulon BRL64_01570 SM00448 cheY-homologous receiver domain BRL64_01590 SM00387 Histidine kinase-like ATPases BRL64_01595 SM00448 cheY-homologous receiver domain BRL64_01595 SM00850 LytTr DNA-binding domain BRL64_01600 SM00382 ATPases associated with a variety of cellular activities BRL64_01695 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_01695 SM00382 ATPases associated with a variety of cellular activities BRL64_01740 SM00354 helix_turn _helix lactose operon repressor BRL64_01835 SM00346 helix_turn_helix isocitrate lyase regulation BRL64_01845 SM01130 BRL64_01845 BRL64_01850 SM00354 helix_turn _helix lactose operon repressor BRL64_01915 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_01930 SM00344 helix_turn_helix ASNC type BRL64_01945 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_01945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_01970 SM00382 ATPases associated with a variety of cellular activities BRL64_01985 SM00823 Phosphopantetheine attachment site BRL64_01990 SM00823 Phosphopantetheine attachment site BRL64_01995 SM00823 Phosphopantetheine attachment site BRL64_02000 SM00822 BRL64_02000 BRL64_02000 SM00823 Phosphopantetheine attachment site BRL64_02005 SM00822 BRL64_02005 BRL64_02010 SM00824 Thioesterase BRL64_02025 SM00382 ATPases associated with a variety of cellular activities BRL64_02045 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_02080 SM00382 ATPases associated with a variety of cellular activities BRL64_02090 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_02110 SM00710 Parallel beta-helix repeats BRL64_02125 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_02125 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BRL64_02135 SM00382 ATPases associated with a variety of cellular activities BRL64_02150 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRL64_02175 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRL64_02180 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_02230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_02230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_02230 SM01049 BRL64_02230 BRL64_02255 SM00894 Excalibur calcium-binding domain BRL64_02280 SM00796 Allophanate hydrolase subunit 1 BRL64_02285 SM00797 Allophanate hydrolase subunit 2 BRL64_02290 SM00346 helix_turn_helix isocitrate lyase regulation BRL64_02365 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_02365 SM00895 BRL64_02365 BRL64_02370 SM00342 helix_turn_helix, arabinose operon control protein BRL64_02380 SM01329 BRL64_02380 BRL64_02385 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BRL64_02385 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BRL64_02385 SM00493 BRL64_02385 BRL64_02395 SM00267 diguanylate cyclase BRL64_02470 SM00091 PAS domain BRL64_02470 SM00387 Histidine kinase-like ATPases BRL64_02475 SM00448 cheY-homologous receiver domain BRL64_02495 SM00382 ATPases associated with a variety of cellular activities BRL64_02540 SM00487 DEAD-like helicases superfamily BRL64_02540 SM00490 helicase superfamily c-terminal domain BRL64_02570 SM01005 Alanine racemase, C-terminal domain BRL64_02600 SM00331 Sigma factor PP2C-like phosphatases BRL64_02620 SM00331 Sigma factor PP2C-like phosphatases BRL64_02625 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_02625 SM00732 Likely ribonuclease with RNase H fold. BRL64_02630 SM00731 SprT homologues. BRL64_02640 SM00861 Transketolase, pyrimidine binding domain BRL64_02655 SM00382 ATPases associated with a variety of cellular activities BRL64_02700 SM00357 Cold shock protein domain BRL64_02705 SM01058 CarD-like/TRCF domain BRL64_02710 SM00829 Enoylreductase BRL64_02715 SM00422 helix_turn_helix, mercury resistance BRL64_02765 SM00870 BRL64_02765 BRL64_02775 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_02830 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_02850 SM00530 Helix-turn-helix XRE-family like proteins BRL64_02970 SM00382 ATPases associated with a variety of cellular activities BRL64_02980 SM00881 CoA binding domain BRL64_03010 SM00883 Chaperonin 10 Kd subunit BRL64_03110 SM00460 Transglutaminase/protease-like homologues BRL64_03125 SM00342 helix_turn_helix, arabinose operon control protein BRL64_03130 SM00917 LeuA allosteric (dimerisation) domain BRL64_03135 SM00342 helix_turn_helix, arabinose operon control protein BRL64_03200 SM01001 AIR carboxylase BRL64_03210 SM00998 Adenylosuccinate lyase C-terminus BRL64_03225 SM01211 BRL64_03225 BRL64_03250 SM00798 AICARFT/IMPCHase bienzyme BRL64_03250 SM00851 MGS-like domain BRL64_03255 SM01209 BRL64_03255 BRL64_03255 SM01210 BRL64_03255 BRL64_03280 SM00882 Coenzyme A transferase BRL64_03285 SM00882 Coenzyme A transferase BRL64_03335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL64_03335 SM00292 breast cancer carboxy-terminal domain BRL64_03335 SM00532 Ligase N family BRL64_03370 SM00845 GatB domain BRL64_03390 SM00046 Diacylglycerol kinase catalytic domain (presumed) BRL64_03575 SM00028 Tetratricopeptide repeats BRL64_03580 SM00382 ATPases associated with a variety of cellular activities BRL64_03590 SM00422 helix_turn_helix, mercury resistance BRL64_03600 SM00382 ATPases associated with a variety of cellular activities BRL64_03605 SM00487 DEAD-like helicases superfamily BRL64_03605 SM00490 helicase superfamily c-terminal domain BRL64_03610 SM00829 Enoylreductase BRL64_03645 SM00320 WD40 repeats BRL64_03660 SM00387 Histidine kinase-like ATPases BRL64_03665 SM00448 cheY-homologous receiver domain BRL64_03680 SM00631 BRL64_03680 BRL64_03760 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_03760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_03775 SM00642 Alpha-amylase domain BRL64_03780 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_03780 SM00866 BRL64_03780 BRL64_03810 SM00226 Low molecular weight phosphatase family BRL64_03890 SM00478 endonuclease III BRL64_03910 SM00422 helix_turn_helix, mercury resistance BRL64_03910 SM00871 Bacterial transcription activator, effector binding domain BRL64_04020 SM00829 Enoylreductase BRL64_04035 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_04055 SM00530 Helix-turn-helix XRE-family like proteins BRL64_04115 SM00835 Cupin BRL64_04170 SM00478 endonuclease III BRL64_04200 SM00382 ATPases associated with a variety of cellular activities BRL64_04205 SM00382 ATPases associated with a variety of cellular activities BRL64_04210 SM00382 ATPases associated with a variety of cellular activities BRL64_04370 SM00855 Phosphoglycerate mutase family BRL64_04415 SM00382 ATPases associated with a variety of cellular activities BRL64_04420 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_04440 SM00382 ATPases associated with a variety of cellular activities BRL64_04475 SM00567 E-Z type HEAT repeats BRL64_04495 SM00763 PrkA AAA domain BRL64_04525 SM00357 Cold shock protein domain BRL64_04530 SM00267 diguanylate cyclase BRL64_04560 SM00138 Methyltransferase, chemotaxis proteins BRL64_04560 SM00387 Histidine kinase-like ATPases BRL64_04560 SM00388 His Kinase A (phosphoacceptor) domain BRL64_04565 SM00318 Staphylococcal nuclease homologues BRL64_04640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRL64_04645 SM00421 helix_turn_helix, Lux Regulon BRL64_04645 SM00448 cheY-homologous receiver domain BRL64_04660 SM01060 BRL64_04660 BRL64_04680 SM00858 BRL64_04680 BRL64_04685 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_04685 SM00895 BRL64_04685 BRL64_04690 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRL64_04705 SM01130 BRL64_04705 BRL64_04710 SM00098 Alkaline phosphatase homologues BRL64_04715 SM00257 Lysin motif BRL64_04740 SM00563 Phosphate acyltransferases BRL64_04745 SM01091 Transporter associated domain BRL64_04755 SM01091 Transporter associated domain BRL64_04805 SM00382 ATPases associated with a variety of cellular activities BRL64_04810 SM00382 ATPases associated with a variety of cellular activities BRL64_04825 SM00382 ATPases associated with a variety of cellular activities BRL64_04865 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_04910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_04940 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_04970 SM00382 ATPases associated with a variety of cellular activities BRL64_05045 SM00849 Metallo-beta-lactamase superfamily BRL64_05075 SM00855 Phosphoglycerate mutase family BRL64_05080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_05095 SM00914 BRL64_05095 BRL64_05120 SM00530 Helix-turn-helix XRE-family like proteins BRL64_05125 SM00530 Helix-turn-helix XRE-family like proteins BRL64_05140 SM01040 BRO family, N-terminal domain BRL64_05145 SM00530 Helix-turn-helix XRE-family like proteins BRL64_05310 SM00060 Fibronectin type 3 domain BRL64_05360 SM00644 BRL64_05360 BRL64_05360 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BRL64_05370 SM00422 helix_turn_helix, mercury resistance BRL64_05410 SM00382 ATPases associated with a variety of cellular activities BRL64_05580 SM00342 helix_turn_helix, arabinose operon control protein BRL64_05615 SM01006 Siderophore biosynthesis protein domain BRL64_05635 SM01018 B12 binding domain BRL64_05650 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_05660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_05660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_05710 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRL64_05730 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BRL64_05735 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BRL64_05790 SM00825 Beta-ketoacyl synthase BRL64_05800 SM00382 ATPases associated with a variety of cellular activities BRL64_05805 SM00382 ATPases associated with a variety of cellular activities BRL64_05850 SM00382 ATPases associated with a variety of cellular activities BRL64_05855 SM00382 ATPases associated with a variety of cellular activities BRL64_05885 SM00155 Phospholipase D. Active site motifs. BRL64_05915 SM01118 BRL64_05915 BRL64_05925 SM00954 Region found in RelA / SpoT proteins BRL64_06090 SM00028 Tetratricopeptide repeats BRL64_06115 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_06130 SM01059 Chloramphenicol acetyltransferase BRL64_06135 SM00028 Tetratricopeptide repeats BRL64_06190 SM00028 Tetratricopeptide repeats BRL64_06200 SM00871 Bacterial transcription activator, effector binding domain BRL64_06215 SM01005 Alanine racemase, C-terminal domain BRL64_06220 SM00612 BRL64_06220 BRL64_06245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_06265 SM00257 Lysin motif BRL64_06265 SM00644 BRL64_06265 BRL64_06290 SM01022 BRL64_06290 BRL64_06315 SM00382 ATPases associated with a variety of cellular activities BRL64_06340 SM00829 Enoylreductase BRL64_06350 SM00861 Transketolase, pyrimidine binding domain BRL64_06355 SM01059 Chloramphenicol acetyltransferase BRL64_06395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_06420 SM00382 ATPases associated with a variety of cellular activities BRL64_06435 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRL64_06445 SM00382 ATPases associated with a variety of cellular activities BRL64_06480 SM00342 helix_turn_helix, arabinose operon control protein BRL64_06510 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BRL64_06520 SM00028 Tetratricopeptide repeats BRL64_06535 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_06560 SM00448 cheY-homologous receiver domain BRL64_06560 SM00862 Transcriptional regulatory protein, C terminal BRL64_06565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_06565 SM00387 Histidine kinase-like ATPases BRL64_06565 SM00388 His Kinase A (phosphoacceptor) domain BRL64_06580 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_06580 SM00924 MgtE intracellular N domain BRL64_06590 SM00422 helix_turn_helix, mercury resistance BRL64_06600 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_06605 SM00052 Putative diguanylate phosphodiesterase BRL64_06605 SM00267 diguanylate cyclase BRL64_06665 SM00091 PAS domain BRL64_06665 SM00387 Histidine kinase-like ATPases BRL64_06665 SM00388 His Kinase A (phosphoacceptor) domain BRL64_06700 SM01007 Class II Aldolase and Adducin N-terminal domain BRL64_06715 SM00387 Histidine kinase-like ATPases BRL64_06715 SM00388 His Kinase A (phosphoacceptor) domain BRL64_06720 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_06735 SM00382 ATPases associated with a variety of cellular activities BRL64_06735 SM01086 C-terminal, D2-small domain, of ClpB protein BRL64_06775 SM00822 BRL64_06775 BRL64_06825 SM00354 helix_turn _helix lactose operon repressor BRL64_06830 SM01061 CAT RNA binding domain BRL64_06860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_06860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_06885 SM00091 PAS domain BRL64_06885 SM00387 Histidine kinase-like ATPases BRL64_06885 SM00388 His Kinase A (phosphoacceptor) domain BRL64_06910 SM00260 Two component signalling adaptor domain BRL64_06910 SM00448 cheY-homologous receiver domain BRL64_06920 SM00342 helix_turn_helix, arabinose operon control protein BRL64_06940 SM00257 Lysin motif BRL64_06955 SM00052 Putative diguanylate phosphodiesterase BRL64_07055 SM00852 Probable molybdopterin binding domain BRL64_07090 SM00382 ATPases associated with a variety of cellular activities BRL64_07100 SM00420 helix_turn_helix, Deoxyribose operon repressor BRL64_07100 SM01134 BRL64_07100 BRL64_07125 SM00382 ATPases associated with a variety of cellular activities BRL64_07140 SM00966 SpoVT / AbrB like domain BRL64_07145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRL64_07145 SM00091 PAS domain BRL64_07145 SM00387 Histidine kinase-like ATPases BRL64_07145 SM00388 His Kinase A (phosphoacceptor) domain BRL64_07165 SM00849 Metallo-beta-lactamase superfamily BRL64_07200 SM00861 Transketolase, pyrimidine binding domain BRL64_07260 SM00838 Elongation factor G C-terminus BRL64_07280 SM00670 Large family of predicted nucleotide-binding domains BRL64_07305 SM00878 Biotin carboxylase C-terminal domain BRL64_07355 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_07430 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BRL64_07465 SM00740 BRL64_07465 BRL64_07470 SM00740 BRL64_07470 BRL64_07525 SM00842 Cell division protein FtsA BRL64_07530 SM00864 Tubulin/FtsZ family, GTPase domain BRL64_07530 SM00865 Tubulin/FtsZ family, C-terminal domain BRL64_07560 SM00858 BRL64_07560 BRL64_07585 SM00382 ATPases associated with a variety of cellular activities BRL64_07615 SM00363 S4 RNA-binding domain BRL64_07640 SM00363 S4 RNA-binding domain BRL64_07665 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BRL64_07670 SM00851 MGS-like domain BRL64_07670 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BRL64_07670 SM01209 BRL64_07670 BRL64_07685 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BRL64_07735 SM00831 Cation transporter/ATPase, N-terminus BRL64_07750 SM00072 Guanylate kinase homologues. BRL64_07755 SM01409 BRL64_07755 BRL64_07765 SM00487 DEAD-like helicases superfamily BRL64_07765 SM00490 helicase superfamily c-terminal domain BRL64_07790 SM00331 Sigma factor PP2C-like phosphatases BRL64_07790 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRL64_07795 SM00220 Serine/Threonine protein kinases, catalytic domain BRL64_07795 SM00740 BRL64_07795 BRL64_07810 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BRL64_07830 SM01120 BRL64_07830 BRL64_07830 SM01121 BRL64_07830 BRL64_07845 SM00487 DEAD-like helicases superfamily BRL64_07845 SM00490 helicase superfamily c-terminal domain BRL64_07860 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BRL64_07865 SM00822 BRL64_07865 BRL64_07875 SM00358 Double-stranded RNA binding motif BRL64_07875 SM00535 Ribonuclease III family BRL64_07880 SM00968 SMC proteins Flexible Hinge Domain BRL64_07885 SM00382 ATPases associated with a variety of cellular activities BRL64_07885 SM00962 SRP54-type protein, GTPase domain BRL64_07885 SM00963 SRP54-type protein, helical bundle domain BRL64_07895 SM00382 ATPases associated with a variety of cellular activities BRL64_07895 SM00962 SRP54-type protein, GTPase domain BRL64_07895 SM00963 SRP54-type protein, helical bundle domain BRL64_07955 SM00881 CoA binding domain BRL64_07965 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BRL64_07965 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BRL64_07965 SM00493 BRL64_07965 BRL64_07985 SM00382 ATPases associated with a variety of cellular activities BRL64_07985 SM01086 C-terminal, D2-small domain, of ClpB protein BRL64_08025 SM00382 ATPases associated with a variety of cellular activities BRL64_08075 SM00448 cheY-homologous receiver domain BRL64_08110 SM00962 SRP54-type protein, GTPase domain BRL64_08120 SM00448 cheY-homologous receiver domain BRL64_08125 SM00073 Histidine Phosphotransfer domain BRL64_08125 SM00260 Two component signalling adaptor domain BRL64_08125 SM00387 Histidine kinase-like ATPases BRL64_08125 SM01231 BRL64_08125 BRL64_08130 SM00260 Two component signalling adaptor domain BRL64_08190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_08200 SM00479 BRL64_08200 BRL64_08200 SM00481 DNA polymerase alpha chain like domain BRL64_08205 SM01067 Cellulose binding domain BRL64_08215 SM00633 Glycosyl hydrolase family 10 BRL64_08235 SM00382 ATPases associated with a variety of cellular activities BRL64_08285 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_08285 SM00322 K homology RNA-binding domain BRL64_08320 SM00904 Riboflavin kinase BRL64_08325 SM01387 BRL64_08325 BRL64_08330 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_08330 SM00322 K homology RNA-binding domain BRL64_08355 SM00382 ATPases associated with a variety of cellular activities BRL64_08360 SM00382 ATPases associated with a variety of cellular activities BRL64_08375 SM01118 BRL64_08375 BRL64_08495 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRL64_08505 SM01130 BRL64_08505 BRL64_08510 SM00849 Metallo-beta-lactamase superfamily BRL64_08525 SM00382 ATPases associated with a variety of cellular activities BRL64_08525 SM00843 BRL64_08525 BRL64_08530 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_08530 SM00866 BRL64_08530 BRL64_08555 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_08590 SM00852 Probable molybdopterin binding domain BRL64_08595 SM00382 ATPases associated with a variety of cellular activities BRL64_08600 SM00322 K homology RNA-binding domain BRL64_08600 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_08620 SM00829 Enoylreductase BRL64_08630 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_08645 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BRL64_08645 SM00534 ATPase domain of DNA mismatch repair MUTS family BRL64_08650 SM00853 MutL C terminal dimerisation domain BRL64_08650 SM01340 BRL64_08650 BRL64_08670 SM01058 CarD-like/TRCF domain BRL64_08680 SM00028 Tetratricopeptide repeats BRL64_08765 SM00646 BRL64_08765 BRL64_08770 SM00382 ATPases associated with a variety of cellular activities BRL64_08785 SM00422 helix_turn_helix, mercury resistance BRL64_08790 SM01230 BRL64_08790 BRL64_08855 SM00028 Tetratricopeptide repeats BRL64_08870 SM00506 Appr-1"-p processing enzyme BRL64_08880 SM00014 Acid phosphatase homologues BRL64_08890 SM00028 Tetratricopeptide repeats BRL64_08905 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BRL64_08975 SM00020 Trypsin-like serine protease BRL64_09005 SM00257 Lysin motif BRL64_09010 SM00857 Resolvase, N terminal domain BRL64_09020 SM00861 Transketolase, pyrimidine binding domain BRL64_09110 SM01207 BRL64_09110 BRL64_09115 SM00881 CoA binding domain BRL64_09120 SM00387 Histidine kinase-like ATPases BRL64_09120 SM00433 TopoisomeraseII BRL64_09125 SM00434 DNA Topoisomerase IV BRL64_09140 SM01266 BRL64_09140 BRL64_09235 SM00420 helix_turn_helix, Deoxyribose operon repressor BRL64_09235 SM01134 BRL64_09235 BRL64_09265 SM00422 helix_turn_helix, mercury resistance BRL64_09275 SM00387 Histidine kinase-like ATPases BRL64_09275 SM00388 His Kinase A (phosphoacceptor) domain BRL64_09280 SM00448 cheY-homologous receiver domain BRL64_09280 SM00862 Transcriptional regulatory protein, C terminal BRL64_09290 SM00606 Cellulose Binding Domain Type IV BRL64_09320 SM00354 helix_turn _helix lactose operon repressor BRL64_09375 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_09410 SM00155 Phospholipase D. Active site motifs. BRL64_09420 SM00100 Cyclic nucleotide-monophosphate binding domain BRL64_09475 SM00878 Biotin carboxylase C-terminal domain BRL64_09500 SM00420 helix_turn_helix, Deoxyribose operon repressor BRL64_09500 SM01134 BRL64_09500 BRL64_09610 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BRL64_09640 SM00382 ATPases associated with a variety of cellular activities BRL64_09645 SM00382 ATPases associated with a variety of cellular activities BRL64_09650 SM00422 helix_turn_helix, mercury resistance BRL64_09665 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BRL64_09680 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BRL64_09745 SM00849 Metallo-beta-lactamase superfamily BRL64_09750 SM00871 Bacterial transcription activator, effector binding domain BRL64_09765 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRL64_09805 SM00257 Lysin motif BRL64_09810 SM00341 Helicase and RNase D C-terminal BRL64_09810 SM00487 DEAD-like helicases superfamily BRL64_09810 SM00490 helicase superfamily c-terminal domain BRL64_09810 SM00956 BRL64_09810 BRL64_09865 SM00861 Transketolase, pyrimidine binding domain BRL64_09870 SM00327 von Willebrand factor (vWF) type A domain BRL64_09875 SM00382 ATPases associated with a variety of cellular activities BRL64_09885 SM00257 Lysin motif BRL64_09950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_09950 SM00245 tail specific protease BRL64_09980 SM00014 Acid phosphatase homologues BRL64_10010 SM00091 PAS domain BRL64_10010 SM00382 ATPases associated with a variety of cellular activities BRL64_10055 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_10155 SM00567 E-Z type HEAT repeats BRL64_10155 SM00932 Scaffold protein Nfu/NifU N terminal BRL64_10160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_10190 SM00357 Cold shock protein domain BRL64_10225 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRL64_10225 SM00475 5'-3' exonuclease BRL64_10270 SM00491 BRL64_10270 BRL64_10280 SM00981 BRL64_10280 BRL64_10305 SM00487 DEAD-like helicases superfamily BRL64_10305 SM00490 helicase superfamily c-terminal domain BRL64_10365 SM00478 endonuclease III BRL64_10365 SM00525 BRL64_10365 BRL64_10390 SM00479 BRL64_10390 BRL64_10390 SM00491 BRL64_10390 BRL64_10430 SM00851 MGS-like domain BRL64_10480 SM00914 BRL64_10480 BRL64_10485 SM00028 Tetratricopeptide repeats BRL64_10550 SM00138 Methyltransferase, chemotaxis proteins BRL64_10555 SM00562 BRL64_10555 BRL64_10585 SM00411 bacterial (prokaryotic) histone like domain BRL64_10635 SM01240 BRL64_10635 BRL64_10640 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_10680 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRL64_10700 SM00257 Lysin motif BRL64_10710 SM00487 DEAD-like helicases superfamily BRL64_10710 SM00490 helicase superfamily c-terminal domain BRL64_10735 SM00257 Lysin motif BRL64_10750 SM00091 PAS domain BRL64_10750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_10750 SM00387 Histidine kinase-like ATPases BRL64_10750 SM00388 His Kinase A (phosphoacceptor) domain BRL64_10755 SM00448 cheY-homologous receiver domain BRL64_10755 SM00862 Transcriptional regulatory protein, C terminal BRL64_10775 SM00363 S4 RNA-binding domain BRL64_10910 SM00387 Histidine kinase-like ATPases BRL64_10920 SM00936 Penicillin-binding protein 5, C-terminal domain BRL64_11000 SM00028 Tetratricopeptide repeats BRL64_11060 SM00849 Metallo-beta-lactamase superfamily BRL64_11080 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_11105 SM00849 Metallo-beta-lactamase superfamily BRL64_11115 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_11115 SM00866 BRL64_11115 BRL64_11150 SM01350 BRL64_11150 BRL64_11175 SM00260 Two component signalling adaptor domain BRL64_11205 SM00382 ATPases associated with a variety of cellular activities BRL64_11215 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_11215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BRL64_11225 SM00046 Diacylglycerol kinase catalytic domain (presumed) BRL64_11240 SM00861 Transketolase, pyrimidine binding domain BRL64_11260 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRL64_11270 SM00091 PAS domain BRL64_11270 SM00382 ATPases associated with a variety of cellular activities BRL64_11295 SM00448 cheY-homologous receiver domain BRL64_11300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_11315 SM00363 S4 RNA-binding domain BRL64_11320 SM00861 Transketolase, pyrimidine binding domain BRL64_11355 SM00878 Biotin carboxylase C-terminal domain BRL64_11400 SM00382 ATPases associated with a variety of cellular activities BRL64_11410 SM00841 Elongation factor P, C-terminal BRL64_11410 SM01185 BRL64_11410 BRL64_11445 SM00529 Helix-turn-helix diphteria tox regulatory element BRL64_11455 SM00450 Rhodanese Homology Domain BRL64_11475 SM00487 DEAD-like helicases superfamily BRL64_11475 SM00490 helicase superfamily c-terminal domain BRL64_11485 SM00530 Helix-turn-helix XRE-family like proteins BRL64_11545 SM00382 ATPases associated with a variety of cellular activities BRL64_11570 SM00849 Metallo-beta-lactamase superfamily BRL64_11590 SM00631 BRL64_11590 BRL64_11610 SM00028 Tetratricopeptide repeats BRL64_11640 SM00382 ATPases associated with a variety of cellular activities BRL64_11645 SM00382 ATPases associated with a variety of cellular activities BRL64_11730 SM00382 ATPases associated with a variety of cellular activities BRL64_11745 SM00518 AP endonuclease family 2 BRL64_11750 SM00487 DEAD-like helicases superfamily BRL64_11750 SM00490 helicase superfamily c-terminal domain BRL64_11785 SM00400 zinc finger BRL64_11785 SM00493 BRL64_11785 BRL64_11800 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_11845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_11895 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_11910 SM00271 DnaJ molecular chaperone homology domain BRL64_11930 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_11935 SM00838 Elongation factor G C-terminus BRL64_11970 SM00849 Metallo-beta-lactamase superfamily BRL64_11980 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL64_12000 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_12010 SM01103 BRL64_12010 BRL64_12045 SM00028 Tetratricopeptide repeats BRL64_12115 SM01007 Class II Aldolase and Adducin N-terminal domain BRL64_12125 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_12135 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_12150 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BRL64_12195 SM00382 ATPases associated with a variety of cellular activities BRL64_12200 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_12220 SM00829 Enoylreductase BRL64_12235 SM00382 ATPases associated with a variety of cellular activities BRL64_12360 SM00732 Likely ribonuclease with RNase H fold. BRL64_12370 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRL64_12380 SM00382 ATPases associated with a variety of cellular activities BRL64_12385 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_12385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BRL64_12420 SM00028 Tetratricopeptide repeats BRL64_12440 SM00382 ATPases associated with a variety of cellular activities BRL64_12465 SM00287 Bacterial SH3 domain homologues BRL64_12465 SM00646 BRL64_12465 BRL64_12475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_12475 SM00954 Region found in RelA / SpoT proteins BRL64_12525 SM01323 BRL64_12525 BRL64_12545 SM00382 ATPases associated with a variety of cellular activities BRL64_12550 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL64_12585 SM00257 Lysin motif BRL64_12630 SM01317 BRL64_12630 BRL64_12725 SM00257 Lysin motif BRL64_12735 SM01004 Delta-aminolevulinic acid dehydratase BRL64_12770 SM00382 ATPases associated with a variety of cellular activities BRL64_12770 SM00464 Found in ATP-dependent protease La (LON) BRL64_12775 SM00382 ATPases associated with a variety of cellular activities BRL64_12780 SM00382 ATPases associated with a variety of cellular activities BRL64_12780 SM00994 ClpX C4-type zinc finger BRL64_12780 SM01086 C-terminal, D2-small domain, of ClpB protein BRL64_12805 SM01329 BRL64_12805 BRL64_12810 SM00917 LeuA allosteric (dimerisation) domain BRL64_12920 SM00909 Sporulation and spore germination BRL64_12930 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_12935 SM00421 helix_turn_helix, Lux Regulon BRL64_12990 SM00465 GIY-YIG type nucleases (URI domain) BRL64_13000 SM00813 Alpha-L-arabinofuranosidase C-terminus BRL64_13005 SM00893 Electron transfer flavoprotein domain BRL64_13010 SM00893 Electron transfer flavoprotein domain BRL64_13040 SM00463 Small MutS-related domain BRL64_13040 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BRL64_13040 SM00534 ATPase domain of DNA mismatch repair MUTS family BRL64_13045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL64_13045 SM00481 DNA polymerase alpha chain like domain BRL64_13045 SM00483 DNA polymerase X family BRL64_13065 SM00873 B3/4 domain BRL64_13065 SM00874 tRNA synthetase B5 domain BRL64_13065 SM00896 Ferredoxin-fold anticodon binding domain BRL64_13075 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRL64_13130 SM00448 cheY-homologous receiver domain BRL64_13130 SM00850 LytTr DNA-binding domain BRL64_13135 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRL64_13135 SM00387 Histidine kinase-like ATPases BRL64_13145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRL64_13145 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_13150 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRL64_13165 SM00382 ATPases associated with a variety of cellular activities BRL64_13190 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRL64_13205 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BRL64_13205 SM01232 BRL64_13205 BRL64_13210 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRL64_13210 SM00474 3'-5' exonuclease BRL64_13210 SM00475 5'-3' exonuclease BRL64_13210 SM00482 DNA polymerase A domain BRL64_13215 SM00387 Histidine kinase-like ATPases BRL64_13215 SM00388 His Kinase A (phosphoacceptor) domain BRL64_13220 SM00448 cheY-homologous receiver domain BRL64_13220 SM00862 Transcriptional regulatory protein, C terminal BRL64_13230 SM01329 BRL64_13230 BRL64_13275 SM00919 Malic enzyme, NAD binding domain BRL64_13275 SM01274 BRL64_13275 BRL64_13280 SM00481 DNA polymerase alpha chain like domain BRL64_13310 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_13315 SM00849 Metallo-beta-lactamase superfamily BRL64_13340 SM00852 Probable molybdopterin binding domain BRL64_13385 SM00487 DEAD-like helicases superfamily BRL64_13385 SM00490 helicase superfamily c-terminal domain BRL64_13400 SM00421 helix_turn_helix, Lux Regulon BRL64_13400 SM00448 cheY-homologous receiver domain BRL64_13410 SM00448 cheY-homologous receiver domain BRL64_13410 SM00862 Transcriptional regulatory protein, C terminal BRL64_13415 SM00387 Histidine kinase-like ATPases BRL64_13415 SM00388 His Kinase A (phosphoacceptor) domain BRL64_13430 SM00382 ATPases associated with a variety of cellular activities BRL64_13460 SM00981 BRL64_13460 BRL64_13495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRL64_13500 SM00363 S4 RNA-binding domain BRL64_13500 SM01390 BRL64_13500 BRL64_13545 SM00363 S4 RNA-binding domain BRL64_13560 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_13570 SM00354 helix_turn _helix lactose operon repressor BRL64_13575 SM00830 Chorismate mutase type II BRL64_13600 SM00382 ATPases associated with a variety of cellular activities BRL64_13600 SM00843 BRL64_13600 BRL64_13640 SM00919 Malic enzyme, NAD binding domain BRL64_13640 SM01274 BRL64_13640 BRL64_13645 SM00849 Metallo-beta-lactamase superfamily BRL64_13705 SM00420 helix_turn_helix, Deoxyribose operon repressor BRL64_13710 SM00363 S4 RNA-binding domain BRL64_13740 SM00450 Rhodanese Homology Domain BRL64_13770 SM00342 helix_turn_helix, arabinose operon control protein BRL64_13820 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRL64_13820 SM00091 PAS domain BRL64_13835 SM00382 ATPases associated with a variety of cellular activities BRL64_13845 SM00382 ATPases associated with a variety of cellular activities BRL64_13850 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_13865 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_13925 SM00563 Phosphate acyltransferases BRL64_13940 SM00382 ATPases associated with a variety of cellular activities BRL64_14000 SM01234 BRL64_14000 BRL64_14005 SM00947 Carbonic anhydrase BRL64_14040 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BRL64_14230 SM00244 prohibitin homologues BRL64_14270 SM00644 BRL64_14270 BRL64_14330 SM00257 Lysin motif BRL64_14410 SM00421 helix_turn_helix, Lux Regulon BRL64_14430 SM00530 Helix-turn-helix XRE-family like proteins BRL64_14435 SM00530 Helix-turn-helix XRE-family like proteins BRL64_14445 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_14445 SM00876 Biotin and Thiamin Synthesis associated domain BRL64_14480 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_14480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_14480 SM00319 Homologues of the ligand binding domain of Tar BRL64_14485 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_14485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_14490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_14490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_14490 SM00319 Homologues of the ligand binding domain of Tar BRL64_14495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_14495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_14495 SM00319 Homologues of the ligand binding domain of Tar BRL64_14520 SM01091 Transporter associated domain BRL64_14570 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_14580 SM00344 helix_turn_helix ASNC type BRL64_14600 SM00387 Histidine kinase-like ATPases BRL64_14600 SM00388 His Kinase A (phosphoacceptor) domain BRL64_14610 SM01298 BRL64_14610 BRL64_14615 SM00479 BRL64_14615 BRL64_14640 SM00387 Histidine kinase-like ATPases BRL64_14645 SM00448 cheY-homologous receiver domain BRL64_14655 SM00382 ATPases associated with a variety of cellular activities BRL64_14720 SM00421 helix_turn_helix, Lux Regulon BRL64_14720 SM00448 cheY-homologous receiver domain BRL64_14725 SM00387 Histidine kinase-like ATPases BRL64_14750 SM00052 Putative diguanylate phosphodiesterase BRL64_14800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_14845 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BRL64_14845 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BRL64_14940 SM00710 Parallel beta-helix repeats BRL64_15015 SM00507 HNH nucleases BRL64_15185 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_15220 SM00835 Cupin BRL64_15285 SM00388 His Kinase A (phosphoacceptor) domain BRL64_15290 SM00448 cheY-homologous receiver domain BRL64_15290 SM00862 Transcriptional regulatory protein, C terminal BRL64_15340 SM00382 ATPases associated with a variety of cellular activities BRL64_15360 SM00382 ATPases associated with a variety of cellular activities BRL64_15360 SM00930 BRL64_15360 BRL64_15375 SM00493 BRL64_15375 BRL64_15425 SM00382 ATPases associated with a variety of cellular activities BRL64_15440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_15445 SM00448 cheY-homologous receiver domain BRL64_15445 SM00862 Transcriptional regulatory protein, C terminal BRL64_15450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_15450 SM00387 Histidine kinase-like ATPases BRL64_15450 SM00388 His Kinase A (phosphoacceptor) domain BRL64_15490 SM00421 helix_turn_helix, Lux Regulon BRL64_15490 SM00448 cheY-homologous receiver domain BRL64_15495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_15495 SM00387 Histidine kinase-like ATPases BRL64_15560 SM01130 BRL64_15560 BRL64_15565 SM00382 ATPases associated with a variety of cellular activities BRL64_15580 SM00710 Parallel beta-helix repeats BRL64_15585 SM00858 BRL64_15585 BRL64_15595 SM00354 helix_turn _helix lactose operon repressor BRL64_15605 SM00387 Histidine kinase-like ATPases BRL64_15605 SM00388 His Kinase A (phosphoacceptor) domain BRL64_15610 SM00448 cheY-homologous receiver domain BRL64_15610 SM00862 Transcriptional regulatory protein, C terminal BRL64_15615 SM00382 ATPases associated with a variety of cellular activities BRL64_15645 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_15705 SM00382 ATPases associated with a variety of cellular activities BRL64_15730 SM00448 cheY-homologous receiver domain BRL64_15735 SM00387 Histidine kinase-like ATPases BRL64_15770 SM00267 diguanylate cyclase BRL64_15800 SM00316 Ribosomal protein S1-like RNA-binding domain BRL64_15800 SM00357 Cold shock protein domain BRL64_15800 SM00955 BRL64_15800 BRL64_15815 SM00966 SpoVT / AbrB like domain BRL64_15820 SM00530 Helix-turn-helix XRE-family like proteins BRL64_15825 SM00530 Helix-turn-helix XRE-family like proteins BRL64_15830 SM00530 Helix-turn-helix XRE-family like proteins BRL64_15855 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL64_15855 SM00382 ATPases associated with a variety of cellular activities BRL64_15895 SM00382 ATPases associated with a variety of cellular activities BRL64_15905 SM01192 BRL64_15905 BRL64_15905 SM01193 BRL64_15905 BRL64_15925 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRL64_15950 SM00091 PAS domain BRL64_15950 SM00382 ATPases associated with a variety of cellular activities BRL64_15955 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_15955 SM00895 BRL64_15955 BRL64_15975 SM00382 ATPases associated with a variety of cellular activities BRL64_15980 SM00382 ATPases associated with a variety of cellular activities BRL64_16065 SM00530 Helix-turn-helix XRE-family like proteins BRL64_16095 SM00382 ATPases associated with a variety of cellular activities BRL64_16100 SM00382 ATPases associated with a variety of cellular activities BRL64_16105 SM00382 ATPases associated with a variety of cellular activities BRL64_16160 SM00947 Carbonic anhydrase BRL64_16215 SM00028 Tetratricopeptide repeats BRL64_16315 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_16315 SM00866 BRL64_16315 BRL64_16350 SM00382 ATPases associated with a variety of cellular activities BRL64_16355 SM00487 DEAD-like helicases superfamily BRL64_16355 SM00490 helicase superfamily c-terminal domain BRL64_16395 SM00448 cheY-homologous receiver domain BRL64_16395 SM00862 Transcriptional regulatory protein, C terminal BRL64_16400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_16400 SM00387 Histidine kinase-like ATPases BRL64_16400 SM00388 His Kinase A (phosphoacceptor) domain BRL64_16420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_16430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_16430 SM00245 tail specific protease BRL64_16450 SM00382 ATPases associated with a variety of cellular activities BRL64_16475 SM00937 BRL64_16475 BRL64_16480 SM00957 SecA DEAD-like domain BRL64_16480 SM00958 SecA preprotein cross-linking domain BRL64_16490 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_16490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_16570 SM00487 DEAD-like helicases superfamily BRL64_16570 SM00490 helicase superfamily c-terminal domain BRL64_16580 SM00421 helix_turn_helix, Lux Regulon BRL64_16580 SM00448 cheY-homologous receiver domain BRL64_16585 SM00387 Histidine kinase-like ATPases BRL64_16630 SM00984 UDP binding domain BRL64_16660 SM00646 BRL64_16660 BRL64_16690 SM00382 ATPases associated with a variety of cellular activities BRL64_16730 SM00047 Lysozyme subfamily 2 BRL64_16730 SM00287 Bacterial SH3 domain homologues BRL64_16755 SM00342 helix_turn_helix, arabinose operon control protein BRL64_16755 SM00448 cheY-homologous receiver domain BRL64_16760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_16760 SM00387 Histidine kinase-like ATPases BRL64_16785 SM00354 helix_turn _helix lactose operon repressor BRL64_16840 SM00854 Bacterial capsule synthesis protein PGA_cap BRL64_16870 SM00354 helix_turn _helix lactose operon repressor BRL64_16885 SM00382 ATPases associated with a variety of cellular activities BRL64_16900 SM00903 Flavin reductase like domain BRL64_16920 SM00344 helix_turn_helix ASNC type BRL64_16935 SM00984 UDP binding domain BRL64_16945 SM00487 DEAD-like helicases superfamily BRL64_16945 SM00490 helicase superfamily c-terminal domain BRL64_16950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRL64_16950 SM00091 PAS domain BRL64_16980 SM00028 Tetratricopeptide repeats BRL64_17005 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_17015 SM00014 Acid phosphatase homologues BRL64_17025 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_17025 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BRL64_17035 SM00382 ATPases associated with a variety of cellular activities BRL64_17045 SM00938 Nitrogen regulatory protein P-II BRL64_17070 SM00833 Cobalamin synthesis protein cobW C-terminal domain BRL64_17080 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL64_17100 SM00327 von Willebrand factor (vWF) type A domain BRL64_17105 SM00327 von Willebrand factor (vWF) type A domain BRL64_17140 SM00382 ATPases associated with a variety of cellular activities BRL64_17200 SM00226 Low molecular weight phosphatase family BRL64_17235 SM00937 BRL64_17235 BRL64_17250 SM00919 Malic enzyme, NAD binding domain BRL64_17250 SM01274 BRL64_17250 BRL64_17265 SM00357 Cold shock protein domain BRL64_17265 SM00382 ATPases associated with a variety of cellular activities BRL64_17265 SM00959 Rho termination factor, N-terminal domain BRL64_17290 SM00448 cheY-homologous receiver domain BRL64_17340 SM00155 Phospholipase D. Active site motifs. BRL64_17360 SM00382 ATPases associated with a variety of cellular activities BRL64_17365 SM00155 Phospholipase D. Active site motifs. BRL64_17375 SM00836 DALR anticodon binding domain BRL64_17375 SM01016 Arginyl tRNA synthetase N terminal dom BRL64_17430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL64_17465 SM00860 SMI1 / KNR4 family BRL64_17540 SM00344 helix_turn_helix ASNC type BRL64_17610 SM00858 BRL64_17610 BRL64_17645 SM00835 Cupin BRL64_17670 SM00986 Uracil DNA glycosylase superfamily BRL64_17670 SM00987 UreE urease accessory protein, C-terminal domain BRL64_17700 SM00640 Glycosyl hydrolases family 32 BRL64_17710 SM01061 CAT RNA binding domain BRL64_17785 SM00342 helix_turn_helix, arabinose operon control protein BRL64_17820 SM00028 Tetratricopeptide repeats BRL64_17880 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BRL64_17890 SM00382 ATPases associated with a variety of cellular activities BRL64_17900 SM00062 Bacterial periplasmic substrate-binding proteins BRL64_17900 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BRL64_17910 SM00954 Region found in RelA / SpoT proteins BRL64_17920 SM00382 ATPases associated with a variety of cellular activities BRL64_17930 SM00710 Parallel beta-helix repeats BRL64_17985 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRL64_18005 SM00656 BRL64_18005 BRL64_18010 SM00382 ATPases associated with a variety of cellular activities BRL64_18015 SM00382 ATPases associated with a variety of cellular activities BRL64_18030 SM00382 ATPases associated with a variety of cellular activities BRL64_18050 SM00382 ATPases associated with a variety of cellular activities BRL64_18065 SM00725 NEAr Transporter domain BRL64_18070 SM00725 NEAr Transporter domain BRL64_18075 SM00725 NEAr Transporter domain BRL64_18165 SM00870 BRL64_18165 BRL64_18170 SM00530 Helix-turn-helix XRE-family like proteins BRL64_18175 SM00530 Helix-turn-helix XRE-family like proteins BRL64_18240 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BRL64_18280 SM01061 CAT RNA binding domain BRL64_18290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_18300 SM00382 ATPases associated with a variety of cellular activities BRL64_18350 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL64_18350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRL64_18355 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BRL64_18365 SM01133 BRL64_18365 BRL64_18395 SM00421 helix_turn_helix, Lux Regulon BRL64_18405 SM00422 helix_turn_helix, mercury resistance BRL64_18415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BRL64_18415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BRL64_18465 SM00354 helix_turn _helix lactose operon repressor BRL64_18510 SM00382 ATPases associated with a variety of cellular activities BRL64_18555 SM00382 ATPases associated with a variety of cellular activities BRL64_18565 SM00028 Tetratricopeptide repeats BRL64_18570 SM01061 CAT RNA binding domain BRL64_18605 SM00530 Helix-turn-helix XRE-family like proteins BRL64_18620 SM00354 helix_turn _helix lactose operon repressor BRL64_18675 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL64_18675 SM00866 BRL64_18675 BRL64_18705 SM00849 Metallo-beta-lactamase superfamily BRL64_18715 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRL64_18755 SM00382 ATPases associated with a variety of cellular activities BRL64_18775 SM00382 ATPases associated with a variety of cellular activities BRL64_18785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL64_18790 SM00849 Metallo-beta-lactamase superfamily BRL64_18805 SM00091 PAS domain BRL64_18805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL64_18805 SM00387 Histidine kinase-like ATPases BRL64_18805 SM00388 His Kinase A (phosphoacceptor) domain BRL64_18810 SM00448 cheY-homologous receiver domain BRL64_18810 SM00862 Transcriptional regulatory protein, C terminal BRL64_18850 SM00788 Adenylosuccinate synthetase BRL64_18860 SM00382 ATPases associated with a variety of cellular activities BRL64_18885 SM00822 BRL64_18885 BRL64_18905 SM00823 Phosphopantetheine attachment site BRL64_18910 SM00923 MbtH-like protein BRL64_18915 SM00342 helix_turn_helix, arabinose operon control protein BRL64_18945 SM00267 diguanylate cyclase BRL64_18955 SM01131 BRL64_18955 BRL64_18975 SM01060 BRL64_18975 BRL64_19000 SM00382 ATPases associated with a variety of cellular activities BRL64_19050 SM00470 ParB-like nuclease domain BRL64_19065 SM00470 ParB-like nuclease domain BRL64_19075 SM01228 BRL64_19075 BRL64_19085 SM00393 Putative single-stranded nucleic acids-binding domain BRL64_19085 SM01245 BRL64_19085