locus-tag	class	description
ORQ91_00001	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
ORQ91_00002	COG0594	ribonuclease P activity
ORQ91_00003	COG0706	membrane insertase activity
ORQ91_00004	COG1847	R3H domain protein
ORQ91_00005	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
ORQ91_00006	COG0445	tRNA wobble uridine modification
ORQ91_00007	COG0357	Ribosomal RNA small subunit methyltransferase G
ORQ91_00008	COG1475	DNA binding
ORQ91_00009	COG1192	Involved in chromosome partitioning
ORQ91_00010	COG1475	DNA binding
ORQ91_00012	COG3949	Membrane
ORQ91_00015	COG4481	Protein conserved in bacteria
ORQ91_00016	COG0012	GTP binding
ORQ91_00017	COG0360	Binds together with S18 to 16S ribosomal RNA
ORQ91_00018	COG0629	single-stranded DNA binding
ORQ91_00019	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ORQ91_00020	COG0517	IMP dehydrogenase activity
ORQ91_00020	COG1125	glycine betaine transport
ORQ91_00021	COG1174	glycine betaine transport
ORQ91_00022	COG0346	lactoylglutathione lyase activity
ORQ91_00023	COG0400	carboxylic ester hydrolase activity
ORQ91_00024	COG0655	NAD(P)H dehydrogenase (quinone) activity
ORQ91_00025	COG0753	catalase activity
ORQ91_00027	COG1595	DNA-templated transcription, initiation
ORQ91_00029	COG1227	inorganic diphosphatase activity
ORQ91_00030	COG4241	membrane
ORQ91_00031	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
ORQ91_00032	COG0359	binds to the 23S rRNA
ORQ91_00033	COG2807	transmembrane transport
ORQ91_00034	COG3093	addiction module antidote protein HigA
ORQ91_00035	COG2819	hydrolase of the alpha beta superfamily
ORQ91_00036	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ORQ91_00037	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ORQ91_00037	COG2207	Transcriptional regulator
ORQ91_00038	COG3251	PFAM MbtH domain protein
ORQ91_00039	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ORQ91_00040	COG3433	isochorismatase activity
ORQ91_00040	COG1535	isochorismatase
ORQ91_00041	COG1021	2,3-dihydroxybenzoate-AMP ligase
ORQ91_00042	COG1169	isochorismate synthase
ORQ91_00043	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_00044	COG2819	hydrolase of the alpha beta superfamily
ORQ91_00049	COG0305	Participates in initiation and elongation during chromosome replication
ORQ91_00050	COG0346	lactoylglutathione lyase activity
ORQ91_00051	COG2124	cytochrome p450
ORQ91_00053	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
ORQ91_00054	COG2311	Membrane
ORQ91_00055	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_00060	COG0745	RESPONSE REGULATOR receiver
ORQ91_00061	COG5002	protein histidine kinase activity
ORQ91_00062	COG4863	YycH protein
ORQ91_00063	COG4853	Protein conserved in bacteria
ORQ91_00064	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
ORQ91_00065	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ORQ91_00066	COG0456	acetyltransferase
ORQ91_00070	COG4720	Psort location CytoplasmicMembrane, score
ORQ91_00072	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ORQ91_00074	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
ORQ91_00082	COG0640	Transcriptional regulator
ORQ91_00083	COG2814	Major facilitator Superfamily
ORQ91_00085	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ORQ91_00088	COG0583	DNA-binding transcription factor activity
ORQ91_00089	COG0384	phenazine biosynthesis protein PhzF
ORQ91_00091	COG2188	Transcriptional regulator
ORQ91_00093	COG2723	6-phospho-beta-galactosidase activity
ORQ91_00095	COG5444	nuclease activity
ORQ91_00099	COG2814	Major facilitator Superfamily
ORQ91_00101	COG2814	Major facilitator Superfamily
ORQ91_00103	COG1609	Transcriptional regulator
ORQ91_00104	COG1113	amino acid transport
ORQ91_00111	COG1263	PTS System
ORQ91_00111	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_00111	COG2190	(PTS) system
ORQ91_00112	COG2723	6-phospho-beta-galactosidase activity
ORQ91_00113	COG3711	transcriptional antiterminator
ORQ91_00114	COG0457	Tetratricopeptide repeat
ORQ91_00116	COG0577	efflux transmembrane transporter activity
ORQ91_00116	COG1136	(ABC) transporter
ORQ91_00118	COG2814	Major facilitator Superfamily
ORQ91_00119	COG1309	transcriptional regulator
ORQ91_00120	COG3835	regulator
ORQ91_00121	COG2610	gluconate transmembrane transporter activity
ORQ91_00122	COG1929	Belongs to the glycerate kinase type-1 family
ORQ91_00123	COG2824	Alkylphosphonate utilization operon protein PhnA
ORQ91_00124	COG1131	(ABC) transporter
ORQ91_00125	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
ORQ91_00127	COG2851	Citrate transporter
ORQ91_00128	COG1874	Beta-galactosidase
ORQ91_00130	COG3833	ABC-type maltose transport systems, permease component
ORQ91_00131	COG1175	transmembrane transport
ORQ91_00132	COG2182	Extracellular solute-binding protein
ORQ91_00133	COG1609	Transcriptional regulator
ORQ91_00134	COG0583	DNA-binding transcription factor activity
ORQ91_00141	COG1737	Transcriptional regulator
ORQ91_00142	COG1070	Carbohydrate kinase
ORQ91_00144	COG4335	DNA alkylation repair
ORQ91_00145	COG1113	amino acid transport
ORQ91_00146	COG0840	transmembrane signaling receptor activity
ORQ91_00147	COG0673	inositol 2-dehydrogenase activity
ORQ91_00148	COG0789	Transcriptional regulator
ORQ91_00149	COG0561	phosphatase activity
ORQ91_00153	COG2755	lipolytic protein G-D-S-L family
ORQ91_00153	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
ORQ91_00154	COG1404	Belongs to the peptidase S8 family
ORQ91_00158	COG2390	Transcriptional regulator
ORQ91_00159	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
ORQ91_00160	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ORQ91_00161	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
ORQ91_00162	COG1846	Transcriptional regulator
ORQ91_00163	COG0778	Nitroreductase
ORQ91_00164	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ORQ91_00171	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ORQ91_00172	COG4721	ABC-type cobalt transport system, permease component
ORQ91_00173	COG1122	ATPase activity
ORQ91_00174	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ORQ91_00176	COG3878	Protein conserved in bacteria
ORQ91_00177	COG3711	transcriptional antiterminator
ORQ91_00178	COG1263	PTS System
ORQ91_00178	COG2190	(PTS) system
ORQ91_00178	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_00179	COG2723	6-phospho-beta-galactosidase activity
ORQ91_00183	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ORQ91_00184	COG2610	gluconate transmembrane transporter activity
ORQ91_00186	COG2084	Dehydrogenase
ORQ91_00187	COG1737	Transcriptional regulator
ORQ91_00190	COG2195	Cleaves the N-terminal amino acid of tripeptides
ORQ91_00191	COG4842	Belongs to the WXG100 family
ORQ91_00196	COG1396	sequence-specific DNA binding
ORQ91_00197	COG0252	asparaginase activity
ORQ91_00198	COG1027	Aspartate ammonia-lyase
ORQ91_00199	COG1757	Na H antiporter
ORQ91_00204	COG3711	transcriptional antiterminator
ORQ91_00204	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_00205	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ORQ91_00206	COG2723	6-phospho-beta-galactosidase activity
ORQ91_00207	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ORQ91_00208	COG1447	Phosphotransferase system cellobiose-specific component IIA
ORQ91_00209	COG0726	polysaccharide deacetylase
ORQ91_00211	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ORQ91_00211	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ORQ91_00212	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ORQ91_00212	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ORQ91_00213	COG2514	catechol 2,3-dioxygenase activity
ORQ91_00214	COG1733	regulation of RNA biosynthetic process
ORQ91_00215	COG5386	Cell surface protein
ORQ91_00216	COG5386	Cell surface protein
ORQ91_00221	COG4509	Sortase family
ORQ91_00225	COG1271	oxidase subunit
ORQ91_00226	COG1294	oxidase, subunit
ORQ91_00227	COG4988	ABC transporter
ORQ91_00228	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ORQ91_00230	COG1595	DNA-templated transcription, initiation
ORQ91_00233	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ORQ91_00238	COG3711	transcriptional antiterminator
ORQ91_00238	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_00239	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ORQ91_00240	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ORQ91_00241	COG1447	Phosphotransferase system cellobiose-specific component IIA
ORQ91_00242	COG1486	melibiose metabolic process
ORQ91_00245	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ORQ91_00246	COG3420	alginic acid biosynthetic process
ORQ91_00248	COG1129	ABC transporter
ORQ91_00249	COG1172	Belongs to the binding-protein-dependent transport system permease family
ORQ91_00250	COG2357	RelA SpoT domain protein
ORQ91_00252	COG0457	Tetratricopeptide repeat
ORQ91_00253	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_00254	COG0765	amino acid transport
ORQ91_00257	COG2801	Transposase and inactivated derivatives
ORQ91_00258	COG0346	lactoylglutathione lyase activity
ORQ91_00259	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
ORQ91_00260	COG1346	cytolysis
ORQ91_00261	COG1380	Effector of murein hydrolase LrgA
ORQ91_00262	COG0583	DNA-binding transcription factor activity
ORQ91_00263	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
ORQ91_00264	COG0352	thiamine-phosphate diphosphorylase activity
ORQ91_00268	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ORQ91_00269	COG3162	membrane
ORQ91_00273	COG2246	polysaccharide biosynthetic process
ORQ91_00276	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
ORQ91_00277	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ORQ91_00278	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
ORQ91_00280	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ORQ91_00281	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ORQ91_00282	COG1845	cytochrome c oxidase, subunit III
ORQ91_00283	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ORQ91_00285	COG0772	Belongs to the SEDS family
ORQ91_00286	COG0778	Nitroreductase
ORQ91_00287	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ORQ91_00288	COG1404	Belongs to the peptidase S8 family
ORQ91_00290	COG3711	transcriptional antiterminator
ORQ91_00291	COG1263	PTS System
ORQ91_00291	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_00292	COG1621	beta-fructofuranosidase activity
ORQ91_00295	COG0457	Tetratricopeptide repeat
ORQ91_00298	COG0351	phosphomethylpyrimidine kinase
ORQ91_00300	COG1216	Glycosyl transferase, family 2
ORQ91_00301	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
ORQ91_00302	COG1012	belongs to the aldehyde dehydrogenase family
ORQ91_00304	COG2233	PERMEase
ORQ91_00305	COG2363	Small membrane protein
ORQ91_00309	COG0463	Glycosyl transferase, family 2
ORQ91_00310	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
ORQ91_00311	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ORQ91_00312	COG0456	acetyltransferase
ORQ91_00313	COG2089	acid synthase
ORQ91_00314	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
ORQ91_00315	COG3980	spore coat polysaccharide biosynthesis protein
ORQ91_00316	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ORQ91_00317	COG1088	dTDP-glucose 4,6-dehydratase activity
ORQ91_00318	COG1091	dTDP-4-dehydrorhamnose reductase activity
ORQ91_00319	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
ORQ91_00320	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_00321	COG0436	Aminotransferase
ORQ91_00322	COG0151	Belongs to the GarS family
ORQ91_00323	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_00325	COG0077	Prephenate dehydratase
ORQ91_00326	COG2814	Major facilitator Superfamily
ORQ91_00327	COG1522	sequence-specific DNA binding
ORQ91_00328	COG2814	Major facilitator Superfamily
ORQ91_00330	COG0280	phosphate acetyltransferase
ORQ91_00332	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ORQ91_00338	COG5444	nuclease activity
ORQ91_00349	COG4844	belongs to the
ORQ91_00350	COG1078	dGTPase activity
ORQ91_00351	COG3465	dGTPase activity
ORQ91_00353	COG1942	4-Oxalocrotonate Tautomerase
ORQ91_00354	COG1994	Peptidase M50
ORQ91_00356	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ORQ91_00357	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
ORQ91_00358	COG0010	Belongs to the arginase family
ORQ91_00360	COG4506	Protein conserved in bacteria
ORQ91_00361	COG0018	arginyl-trna synthetase
ORQ91_00362	COG1619	proteins homologs of microcin C7 resistance protein MccF
ORQ91_00363	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ORQ91_00364	COG1132	(ABC) transporter
ORQ91_00365	COG1619	proteins homologs of microcin C7 resistance protein MccF
ORQ91_00367	COG4294	response to UV
ORQ91_00368	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ORQ91_00369	COG2181	nitrate reductase activity
ORQ91_00369	COG0247	lactate metabolic process
ORQ91_00370	COG0183	Belongs to the thiolase family
ORQ91_00371	COG1250	3-hydroxyacyl-CoA dehydrogenase
ORQ91_00372	COG1960	acyl-CoA dehydrogenase activity
ORQ91_00373	COG1960	acyl-CoA dehydrogenase activity
ORQ91_00381	COG3343	RNA polymerase activity
ORQ91_00382	COG0504	CTP synthase activity
ORQ91_00383	COG4821	SIS domain
ORQ91_00384	COG2204	response regulator
ORQ91_00385	COG0191	fructose-bisphosphate aldolase activity
ORQ91_00386	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ORQ91_00387	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ORQ91_00388	COG1494	fructose-1,6-bisphosphatase
ORQ91_00389	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ORQ91_00390	COG0254	rRNA binding
ORQ91_00391	COG1435	thymidine kinase activity
ORQ91_00392	COG0281	malic enzyme
ORQ91_00393	COG0679	Auxin Efflux Carrier
ORQ91_00394	COG0789	Transcriptional regulator
ORQ91_00395	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
ORQ91_00396	COG2890	protein-(glutamine-N5) methyltransferase activity
ORQ91_00399	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ORQ91_00400	COG0009	L-threonylcarbamoyladenylate synthase
ORQ91_00401	COG1971	Probably functions as a manganese efflux pump
ORQ91_00402	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ORQ91_00403	COG0698	ribose 5-phosphate isomerase
ORQ91_00404	COG4475	Protein of unknown function (DUF436)
ORQ91_00405	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
ORQ91_00406	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
ORQ91_00408	COG0356	it plays a direct role in the translocation of protons across the membrane
ORQ91_00409	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ORQ91_00410	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
ORQ91_00411	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
ORQ91_00412	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
ORQ91_00413	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
ORQ91_00414	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
ORQ91_00415	COG0355	proton-transporting ATP synthase activity, rotational mechanism
ORQ91_00417	COG4836	Membrane
ORQ91_00419	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
ORQ91_00420	COG2385	sporulation resulting in formation of a cellular spore
ORQ91_00421	COG2304	oxidoreductase activity
ORQ91_00422	COG2304	oxidoreductase activity
ORQ91_00423	COG0243	molybdopterin cofactor binding
ORQ91_00424	COG2223	nitrite transmembrane transporter activity
ORQ91_00425	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
ORQ91_00426	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
ORQ91_00427	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ORQ91_00428	COG0523	cobalamin synthesis protein
ORQ91_00437	COG1247	-acetyltransferase
ORQ91_00438	COG0739	heme binding
ORQ91_00439	COG0347	Belongs to the P(II) protein family
ORQ91_00440	COG0004	ammonium transporteR
ORQ91_00442	COG0765	amino acid transport
ORQ91_00443	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_00444	COG0477	Major facilitator Superfamily
ORQ91_00445	COG0671	phosphoesterase, PA-phosphatase related
ORQ91_00446	COG2814	Major facilitator Superfamily
ORQ91_00447	COG1846	Transcriptional regulator
ORQ91_00448	COG1609	Transcriptional regulator
ORQ91_00449	COG1077	Cell shape determining protein MreB Mrl
ORQ91_00450	COG4786	Flagellar basal body rod
ORQ91_00451	COG4786	Flagellar basal body rod
ORQ91_00452	COG0457	Tetratricopeptide repeat
ORQ91_00453	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
ORQ91_00454	COG1970	mechanosensitive ion channel activity
ORQ91_00457	COG0561	phosphatase activity
ORQ91_00458	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_00458	COG2202	Pas domain
ORQ91_00459	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ORQ91_00460	COG4715	Zinc finger, swim domain protein
ORQ91_00462	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ORQ91_00463	COG2059	Chromate
ORQ91_00464	COG2059	Chromate
ORQ91_00465	COG1522	sequence-specific DNA binding
ORQ91_00466	COG3527	Alpha-acetolactate decarboxylase
ORQ91_00467	COG0028	Belongs to the TPP enzyme family
ORQ91_00468	COG0583	DNA-binding transcription factor activity
ORQ91_00469	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ORQ91_00470	COG1879	ABC-type sugar transport system periplasmic component
ORQ91_00471	COG1172	Belongs to the binding-protein-dependent transport system permease family
ORQ91_00472	COG1129	ABC transporter
ORQ91_00473	COG1869	D-ribose catabolic process
ORQ91_00474	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ORQ91_00475	COG1609	Transcriptional regulator
ORQ91_00478	COG0697	spore germination
ORQ91_00479	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ORQ91_00481	COG2843	Capsule synthesis protein
ORQ91_00483	COG0791	NLP P60 protein
ORQ91_00484	COG0561	phosphatase activity
ORQ91_00485	COG1316	TRANSCRIPTIONal
ORQ91_00486	COG2814	Major facilitator Superfamily
ORQ91_00489	COG0814	amino acid
ORQ91_00490	COG0697	spore germination
ORQ91_00491	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_00492	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
ORQ91_00493	COG1609	Transcriptional regulator
ORQ91_00494	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ORQ91_00495	COG0800	Aldolase
ORQ91_00496	COG0454	-acetyltransferase
ORQ91_00498	COG2972	Histidine kinase
ORQ91_00499	COG2201	protein-glutamate methylesterase activity
ORQ91_00500	COG1653	transport
ORQ91_00501	COG1175	transmembrane transport
ORQ91_00503	COG1482	cell wall glycoprotein biosynthetic process
ORQ91_00504	COG4193	domain, Protein
ORQ91_00505	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
ORQ91_00506	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
ORQ91_00507	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ORQ91_00509	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
ORQ91_00511	COG1682	transport, permease protein
ORQ91_00512	COG1134	teichoic acid transport
ORQ91_00513	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ORQ91_00514	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
ORQ91_00515	COG1316	TRANSCRIPTIONal
ORQ91_00517	COG2385	sporulation resulting in formation of a cellular spore
ORQ91_00517	COG2247	cell wall binding repeat
ORQ91_00518	COG2247	cell wall binding repeat
ORQ91_00518	COG0860	N-Acetylmuramoyl-L-alanine amidase
ORQ91_00519	COG0860	N-Acetylmuramoyl-L-alanine amidase
ORQ91_00519	COG2247	cell wall binding repeat
ORQ91_00522	COG2244	polysaccharide biosynthetic process
ORQ91_00523	COG0438	transferase activity, transferring glycosyl groups
ORQ91_00523	COG0297	glycogen (starch) synthase activity
ORQ91_00524	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ORQ91_00525	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ORQ91_00526	COG3307	-O-antigen
ORQ91_00527	COG3206	protein involved in exopolysaccharide biosynthesis
ORQ91_00528	COG1215	transferase activity, transferring glycosyl groups
ORQ91_00529	COG0438	transferase activity, transferring glycosyl groups
ORQ91_00530	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ORQ91_00531	COG1316	TRANSCRIPTIONal
ORQ91_00532	COG1739	Uncharacterized protein family UPF0029
ORQ91_00533	COG4585	Histidine kinase
ORQ91_00534	COG2197	response regulator
ORQ91_00535	COG1307	EDD domain protein, DegV family
ORQ91_00536	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
ORQ91_00538	COG1040	competence protein
ORQ91_00541	COG3418	PFAM FlgN family protein
ORQ91_00542	COG1256	bacterial-type flagellum assembly
ORQ91_00542	COG4786	Flagellar basal body rod
ORQ91_00543	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ORQ91_00545	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
ORQ91_00546	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ORQ91_00547	COG1334	flagellar protein FlaG
ORQ91_00548	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
ORQ91_00549	COG1516	flagellar protein fliS
ORQ91_00552	COG0840	transmembrane signaling receptor activity
ORQ91_00553	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ORQ91_00554	COG0653	protein targeting
ORQ91_00555	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ORQ91_00558	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ORQ91_00559	COG2010	Cytochrome c
ORQ91_00560	COG2884	Cell division ATP-binding protein ftsE
ORQ91_00561	COG2177	Part of the ABC transporter FtsEX involved in
ORQ91_00562	COG0791	NLP P60 protein
ORQ91_00562	COG3883	PFAM NLP P60 protein
ORQ91_00563	COG0730	response to heat
ORQ91_00564	COG3409	Peptidoglycan-binding domain 1 protein
ORQ91_00564	COG0793	Belongs to the peptidase S41A family
ORQ91_00566	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ORQ91_00567	COG1733	regulation of RNA biosynthetic process
ORQ91_00568	COG0778	Nitroreductase
ORQ91_00569	COG1113	amino acid transport
ORQ91_00570	COG0463	Glycosyl transferase, family 2
ORQ91_00571	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
ORQ91_00572	COG5002	protein histidine kinase activity
ORQ91_00573	COG0745	RESPONSE REGULATOR receiver
ORQ91_00575	COG2814	Major facilitator Superfamily
ORQ91_00576	COG1309	transcriptional regulator
ORQ91_00577	COG0574	Belongs to the PEP-utilizing enzyme family
ORQ91_00577	COG3848	Pyruvate phosphate dikinase
ORQ91_00578	COG4897	Protein conserved in bacteria
ORQ91_00580	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
ORQ91_00583	COG3595	metallopeptidase activity
ORQ91_00584	COG1983	PspC domain protein
ORQ91_00585	COG1950	PFAM Membrane protein of
ORQ91_00586	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ORQ91_00587	COG2188	Transcriptional regulator
ORQ91_00588	COG0363	glucosamine-6-phosphate deaminase activity
ORQ91_00589	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ORQ91_00590	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
ORQ91_00592	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
ORQ91_00593	COG0546	phosphoglycolate phosphatase activity
ORQ91_00594	COG0110	maltose O-acetyltransferase activity
ORQ91_00595	COG1959	2 iron, 2 sulfur cluster binding
ORQ91_00596	COG2910	NAD(P)H-binding
ORQ91_00598	COG4990	cell redox homeostasis
ORQ91_00599	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
ORQ91_00600	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
ORQ91_00601	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
ORQ91_00602	COG0131	Imidazoleglycerol-phosphate dehydratase
ORQ91_00603	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ORQ91_00604	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
ORQ91_00605	COG0107	imidazoleglycerol-phosphate synthase activity
ORQ91_00606	COG0140	phosphoribosyl-ATP diphosphatase activity
ORQ91_00606	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
ORQ91_00607	COG0457	Tetratricopeptide repeat
ORQ91_00608	COG0791	NLP P60 protein
ORQ91_00608	COG3883	PFAM NLP P60 protein
ORQ91_00609	COG0492	ferredoxin-NADP+ reductase activity
ORQ91_00610	COG1051	belongs to the nudix hydrolase family
ORQ91_00611	COG1660	Displays ATPase and GTPase activities
ORQ91_00612	COG0391	Required for morphogenesis under gluconeogenic growth conditions
ORQ91_00613	COG1481	regulation of sporulation
ORQ91_00614	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_00615	COG2162	N-hydroxyarylamine O-acetyltransferase activity
ORQ91_00617	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ORQ91_00618	COG0288	reversible hydration of carbon dioxide
ORQ91_00619	COG0659	secondary active sulfate transmembrane transporter activity
ORQ91_00620	COG1694	Mazg nucleotide pyrophosphohydrolase
ORQ91_00621	COG1611	Belongs to the LOG family
ORQ91_00622	COG0740	serine-type endopeptidase activity
ORQ91_00625	COG3177	Filamentation induced by cAMP protein fic
ORQ91_00628	COG1819	glycosyl
ORQ91_00629	COG0747	negative chemotaxis
ORQ91_00630	COG0601	transmembrane transport
ORQ91_00634	COG0488	(ABC) transporter
ORQ91_00635	COG0726	polysaccharide deacetylase
ORQ91_00636	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ORQ91_00637	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ORQ91_00638	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ORQ91_00640	COG1396	sequence-specific DNA binding
ORQ91_00641	COG3944	biosynthesis protein
ORQ91_00642	COG0489	protein tyrosine kinase activity
ORQ91_00643	COG1086	Polysaccharide biosynthesis protein
ORQ91_00644	COG0438	transferase activity, transferring glycosyl groups
ORQ91_00645	COG1215	transferase activity, transferring glycosyl groups
ORQ91_00646	COG0438	transferase activity, transferring glycosyl groups
ORQ91_00648	COG1216	Glycosyl transferase, family 2
ORQ91_00649	COG5039	Polysaccharide pyruvyl transferase
ORQ91_00650	COG2244	polysaccharide biosynthetic process
ORQ91_00651	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ORQ91_00652	COG0110	maltose O-acetyltransferase activity
ORQ91_00653	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ORQ91_00654	COG0747	negative chemotaxis
ORQ91_00655	COG0601	transmembrane transport
ORQ91_00656	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ORQ91_00657	COG0444	Belongs to the ABC transporter superfamily
ORQ91_00659	COG0534	Mate efflux family protein
ORQ91_00661	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
ORQ91_00662	COG2186	Transcriptional regulator
ORQ91_00663	COG3829	transcription factor binding
ORQ91_00664	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ORQ91_00665	COG0833	amino acid
ORQ91_00667	COG2390	Transcriptional regulator
ORQ91_00668	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ORQ91_00669	COG0126	phosphoglycerate kinase activity
ORQ91_00670	COG0149	triose-phosphate isomerase activity
ORQ91_00671	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
ORQ91_00672	COG0148	phosphopyruvate hydratase activity
ORQ91_00674	COG1122	ATPase activity
ORQ91_00678	COG0456	acetyltransferase
ORQ91_00680	COG2095	MarC family integral membrane protein
ORQ91_00681	COG1510	regulation of RNA biosynthetic process
ORQ91_00682	COG0517	IMP dehydrogenase activity
ORQ91_00682	COG1125	glycine betaine transport
ORQ91_00683	COG1174	glycine betaine transport
ORQ91_00684	COG1732	Glycine betaine
ORQ91_00685	COG1174	glycine betaine transport
ORQ91_00686	COG1733	regulation of RNA biosynthetic process
ORQ91_00687	COG1396	sequence-specific DNA binding
ORQ91_00688	COG1396	sequence-specific DNA binding
ORQ91_00689	COG1476	TRANSCRIPTIONal
ORQ91_00690	COG2002	toxin-antitoxin pair type II binding
ORQ91_00691	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ORQ91_00692	COG1647	Serine aminopeptidase, S33
ORQ91_00693	COG0557	exoribonuclease II activity
ORQ91_00694	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
ORQ91_00702	COG1937	Protein conserved in bacteria
ORQ91_00703	COG2608	mercury ion transmembrane transporter activity
ORQ91_00704	COG2217	Heavy metal translocating P-type atpase
ORQ91_00707	COG1027	Aspartate ammonia-lyase
ORQ91_00708	COG4191	Histidine kinase
ORQ91_00709	COG0784	Response regulator, receiver
ORQ91_00710	COG3226	Transcriptional regulator
ORQ91_00712	COG0803	Belongs to the bacterial solute-binding protein 9 family
ORQ91_00713	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ORQ91_00714	COG1121	(ABC) transporter
ORQ91_00715	COG2217	Heavy metal translocating P-type atpase
ORQ91_00716	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ORQ91_00717	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
ORQ91_00718	COG2860	membrane
ORQ91_00719	COG0025	NhaP-type Na H and K H
ORQ91_00720	COG1940	carbohydrate kinase activity
ORQ91_00721	COG0656	L-ascorbic acid biosynthetic process
ORQ91_00722	COG4149	molybdate abc transporter
ORQ91_00723	COG0725	ABC transporter, periplasmic molybdate-binding protein
ORQ91_00724	COG1368	sulfuric ester hydrolase activity
ORQ91_00725	COG1988	membrane-bound metal-dependent
ORQ91_00728	COG0531	amino acid
ORQ91_00729	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ORQ91_00730	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ORQ91_00731	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ORQ91_00732	COG1120	ATPase activity
ORQ91_00733	COG0745	RESPONSE REGULATOR receiver
ORQ91_00734	COG2205	protein histidine kinase activity
ORQ91_00735	COG1904	glucuronate isomerase
ORQ91_00736	COG1609	Transcriptional regulator
ORQ91_00737	COG0246	Mannitol dehydrogenase
ORQ91_00738	COG2721	sulfolactate sulfo-lyase activity
ORQ91_00740	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ORQ91_00741	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ORQ91_00742	COG1120	ATPase activity
ORQ91_00743	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ORQ91_00744	COG1454	alcohol dehydrogenase
ORQ91_00747	COG2204	response regulator
ORQ91_00748	COG3395	kinase activity
ORQ91_00749	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
ORQ91_00750	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_00751	COG2096	Adenosyltransferase
ORQ91_00752	COG4758	membrane
ORQ91_00753	COG1842	Phage shock protein A
ORQ91_00755	COG4758	membrane
ORQ91_00756	COG4585	Histidine kinase
ORQ91_00757	COG2197	response regulator
ORQ91_00760	COG0814	amino acid
ORQ91_00761	COG0697	spore germination
ORQ91_00763	COG0114	fumarate hydratase activity
ORQ91_00764	COG1309	transcriptional regulator
ORQ91_00766	COG2205	protein histidine kinase activity
ORQ91_00766	COG2770	Histidine kinase
ORQ91_00767	COG0745	RESPONSE REGULATOR receiver
ORQ91_00768	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ORQ91_00769	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_00771	COG1120	ATPase activity
ORQ91_00773	COG5577	PFAM Coat F domain
ORQ91_00776	COG1024	Enoyl-CoA hydratase
ORQ91_00776	COG1250	3-hydroxyacyl-CoA dehydrogenase
ORQ91_00777	COG0183	Belongs to the thiolase family
ORQ91_00778	COG1960	acyl-CoA dehydrogenase activity
ORQ91_00779	COG1393	Belongs to the ArsC family
ORQ91_00780	COG0509	glycine decarboxylation via glycine cleavage system
ORQ91_00782	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
ORQ91_00783	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_00785	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
ORQ91_00786	COG2011	ABC-type metal ion transport system permease component
ORQ91_00787	COG1464	Belongs to the NlpA lipoprotein family
ORQ91_00788	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ORQ91_00789	COG0396	ATPase activity
ORQ91_00790	COG0719	Fe-S assembly protein
ORQ91_00791	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ORQ91_00792	COG0822	iron-sulfur transferase activity
ORQ91_00793	COG0719	Fe-S assembly protein
ORQ91_00794	COG1309	transcriptional regulator
ORQ91_00796	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ORQ91_00798	COG2311	Membrane
ORQ91_00799	COG0745	RESPONSE REGULATOR receiver
ORQ91_00800	COG5002	protein histidine kinase activity
ORQ91_00800	COG0642	Histidine kinase
ORQ91_00802	COG0561	phosphatase activity
ORQ91_00805	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ORQ91_00806	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ORQ91_00807	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ORQ91_00809	COG2356	endonuclease I
ORQ91_00810	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
ORQ91_00811	COG2814	Major facilitator Superfamily
ORQ91_00812	COG2140	Oxalate decarboxylase
ORQ91_00813	COG2508	Transcriptional regulator
ORQ91_00814	COG1801	Protein of unknown function DUF72
ORQ91_00815	COG0737	Belongs to the 5'-nucleotidase family
ORQ91_00816	COG3377	Domain of unknown function (DUF1805)
ORQ91_00818	COG0739	heme binding
ORQ91_00819	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
ORQ91_00821	COG4470	Protein conserved in bacteria
ORQ91_00822	COG2445	Protein of unknown function DUF86
ORQ91_00823	COG0647	UMP catabolic process
ORQ91_00824	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ORQ91_00825	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ORQ91_00826	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ORQ91_00827	COG0460	homoserine dehydrogenase
ORQ91_00828	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ORQ91_00829	COG0083	homoserine kinase activity
ORQ91_00830	COG4946	Tricorn protease homolog
ORQ91_00830	COG0823	Involved in the tonB-independent uptake of proteins
ORQ91_00830	COG1506	peptidase
ORQ91_00831	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
ORQ91_00832	COG4837	Protein of unknown function (DUF1462)
ORQ91_00834	COG1252	NADH dehydrogenase
ORQ91_00835	COG4844	belongs to the
ORQ91_00836	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
ORQ91_00837	COG0316	Belongs to the HesB IscA family
ORQ91_00838	COG0789	Transcriptional regulator
ORQ91_00840	COG0492	ferredoxin-NADP+ reductase activity
ORQ91_00841	COG1252	NADH dehydrogenase
ORQ91_00844	COG3584	3D domain protein
ORQ91_00845	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
ORQ91_00846	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
ORQ91_00847	COG2056	Na+-H+ antiporter family
ORQ91_00848	COG4326	sporulation control protein
ORQ91_00849	COG1268	BioY protein
ORQ91_00850	COG0686	Belongs to the AlaDH PNT family
ORQ91_00851	COG2508	Transcriptional regulator
ORQ91_00851	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ORQ91_00852	COG4842	Belongs to the WXG100 family
ORQ91_00853	COG5417	Belongs to the EsaB family
ORQ91_00854	COG4499	WXG100 protein secretion system (Wss), protein YukC
ORQ91_00855	COG1674	ftsk spoiiie
ORQ91_00855	COG0433	COG0433 Predicted ATPase
ORQ91_00856	COG1511	domain protein
ORQ91_00858	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_00859	COG1418	mRNA catabolic process
ORQ91_00862	COG0628	permease
ORQ91_00866	COG5506	Protein of unknown function (DUF1694)
ORQ91_00867	COG1335	isochorismatase
ORQ91_00868	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
ORQ91_00869	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
ORQ91_00872	COG0142	geranyltranstransferase activity
ORQ91_00874	COG4585	Histidine kinase
ORQ91_00875	COG2197	response regulator
ORQ91_00876	COG2050	protein possibly involved in aromatic compounds catabolism
ORQ91_00877	COG1320	monovalent cation:proton antiporter activity
ORQ91_00878	COG2212	antiporter activity
ORQ91_00879	COG1863	multisubunit Na H antiporter MnhE subunit
ORQ91_00880	COG0651	ATP synthesis coupled electron transport
ORQ91_00881	COG1006	Multisubunit Na H antiporter MnhC subunit
ORQ91_00882	COG2111	Na H antiporter
ORQ91_00883	COG2111	Na H antiporter
ORQ91_00883	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ORQ91_00885	COG3493	citrate carrier protein
ORQ91_00886	COG1079	Belongs to the binding-protein-dependent transport system permease family
ORQ91_00887	COG4603	Belongs to the binding-protein-dependent transport system permease family
ORQ91_00888	COG3845	ABC transporter
ORQ91_00889	COG1744	ABC transporter substrate-binding protein PnrA-like
ORQ91_00890	COG4565	transcriptional regulatory protein
ORQ91_00891	COG3290	protein histidine kinase activity
ORQ91_00893	COG3011	Protein conserved in bacteria
ORQ91_00894	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ORQ91_00895	COG2814	Major facilitator Superfamily
ORQ91_00896	COG5018	Exonuclease
ORQ91_00899	COG2205	protein histidine kinase activity
ORQ91_00900	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ORQ91_00901	COG2267	carboxylic ester hydrolase activity
ORQ91_00902	COG1522	sequence-specific DNA binding
ORQ91_00903	COG0436	Aminotransferase
ORQ91_00904	COG1098	S1 RNA binding domain
ORQ91_00905	COG2155	Conserved Protein
ORQ91_00906	COG1979	alcohol dehydrogenase
ORQ91_00907	COG1979	alcohol dehydrogenase
ORQ91_00908	COG0166	Belongs to the GPI family
ORQ91_00911	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ORQ91_00913	COG2738	Putative neutral zinc metallopeptidase
ORQ91_00914	COG1253	flavin adenine dinucleotide binding
ORQ91_00915	COG0432	Pfam Uncharacterised protein family UPF0047
ORQ91_00916	COG2070	2-Nitropropane dioxygenase
ORQ91_00919	COG0840	transmembrane signaling receptor activity
ORQ91_00920	COG0840	transmembrane signaling receptor activity
ORQ91_00921	COG0840	transmembrane signaling receptor activity
ORQ91_00922	COG0840	transmembrane signaling receptor activity
ORQ91_00923	COG0693	protein deglycase activity
ORQ91_00924	COG0673	inositol 2-dehydrogenase activity
ORQ91_00926	COG0628	permease
ORQ91_00927	COG1968	undecaprenyl-diphosphatase activity
ORQ91_00929	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
ORQ91_00931	COG1396	sequence-specific DNA binding
ORQ91_00935	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
ORQ91_00937	COG1595	DNA-templated transcription, initiation
ORQ91_00938	COG5484	DNA packaging
ORQ91_00939	COG1783	phage Terminase large subunit
ORQ91_00940	COG5518	Phage portal protein
ORQ91_00941	COG0338	D12 class N6 adenine-specific DNA methyltransferase
ORQ91_00942	COG4653	Phage capsid family
ORQ91_00951	COG5280	Phage tail tape measure protein TP901
ORQ91_00951	COG3953	SLT domain
ORQ91_00952	COG1652	LysM domain
ORQ91_00953	COG4193	domain, Protein
ORQ91_00955	COG3628	GPW Gp25 family protein
ORQ91_00956	COG3299	homolog of phage Mu protein gp47
ORQ91_00957	COG3778	Protein conserved in bacteria
ORQ91_00968	COG3409	Peptidoglycan-binding domain 1 protein
ORQ91_00968	COG5632	N-Acetylmuramoyl-L-alanine amidase
ORQ91_00971	COG1510	regulation of RNA biosynthetic process
ORQ91_00972	COG1012	belongs to the aldehyde dehydrogenase family
ORQ91_00973	COG1454	alcohol dehydrogenase
ORQ91_00974	COG2318	DinB family
ORQ91_00975	COG1585	Membrane protein implicated in regulation of membrane protease activity
ORQ91_00976	COG2268	Band 7 protein
ORQ91_00977	COG0772	Belongs to the SEDS family
ORQ91_00978	COG0772	Belongs to the SEDS family
ORQ91_00979	COG3339	Conserved Protein
ORQ91_00980	COG1247	-acetyltransferase
ORQ91_00982	COG3859	Proton-coupled thiamine transporter YuaJ
ORQ91_01008	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ORQ91_01009	COG1575	Belongs to the MenA family. Type 1 subfamily
ORQ91_01010	COG1169	isochorismate synthase
ORQ91_01011	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
ORQ91_01012	COG0596	Alpha beta hydrolase
ORQ91_01013	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
ORQ91_01014	COG0318	PFAM AMP-dependent synthetase and ligase
ORQ91_01015	COG4948	Mandelate Racemase Muconate Lactonizing
ORQ91_01018	COG1294	oxidase, subunit
ORQ91_01019	COG1271	oxidase subunit
ORQ91_01020	COG0254	rRNA binding
ORQ91_01021	COG0803	Belongs to the bacterial solute-binding protein 9 family
ORQ91_01021	COG3443	Belongs to the bacterial solute-binding protein 9 family
ORQ91_01022	COG0288	reversible hydration of carbon dioxide
ORQ91_01023	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
ORQ91_01024	COG1854	S-ribosylhomocysteine lyase activity
ORQ91_01027	COG0783	Belongs to the Dps family
ORQ91_01029	COG4824	toxin secretion phage lysis holin
ORQ91_01032	COG2310	stress, protein
ORQ91_01033	COG0494	nUDIX hydrolase
ORQ91_01034	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ORQ91_01035	COG1116	anion transmembrane transporter activity
ORQ91_01036	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ORQ91_01040	COG1233	COG1233 Phytoene dehydrogenase and related
ORQ91_01041	COG1506	peptidase
ORQ91_01043	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
ORQ91_01044	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
ORQ91_01045	COG0367	asparagine synthase
ORQ91_01046	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ORQ91_01047	COG2267	carboxylic ester hydrolase activity
ORQ91_01049	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
ORQ91_01050	COG1242	4 iron, 4 sulfur cluster binding
ORQ91_01053	COG1725	Transcriptional regulator
ORQ91_01054	COG1131	(ABC) transporter
ORQ91_01056	COG1136	(ABC) transporter
ORQ91_01057	COG0577	efflux transmembrane transporter activity
ORQ91_01058	COG2433	Pfam Transposase IS66
ORQ91_01059	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_01059	COG2202	Pas domain
ORQ91_01061	COG0495	leucyl-tRNA aminoacylation
ORQ91_01062	COG1073	alpha beta
ORQ91_01063	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ORQ91_01064	COG0395	ABC-type sugar transport system, permease component
ORQ91_01065	COG1653	transport
ORQ91_01066	COG0656	L-ascorbic acid biosynthetic process
ORQ91_01067	COG2814	Major facilitator Superfamily
ORQ91_01068	COG1733	regulation of RNA biosynthetic process
ORQ91_01069	COG2207	Transcriptional regulator
ORQ91_01070	COG4209	transmembrane transport
ORQ91_01071	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ORQ91_01072	COG1653	transport
ORQ91_01073	COG0673	inositol 2-dehydrogenase activity
ORQ91_01074	COG5578	integral membrane protein
ORQ91_01075	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ORQ91_01077	COG3196	Protein conserved in bacteria
ORQ91_01078	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
ORQ91_01080	COG2081	HI0933 family
ORQ91_01081	COG2244	polysaccharide biosynthetic process
ORQ91_01082	COG1187	pseudouridine synthase activity
ORQ91_01083	COG1349	DNA-binding transcription factor activity
ORQ91_01084	COG2252	PERMEase
ORQ91_01085	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ORQ91_01086	COG3340	Belongs to the peptidase S51 family
ORQ91_01087	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ORQ91_01088	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
ORQ91_01090	COG1597	lipid kinase activity
ORQ91_01091	COG0510	thiamine kinase activity
ORQ91_01093	COG0220	tRNA (guanine-N7-)-methyltransferase activity
ORQ91_01094	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ORQ91_01095	COG0281	malic enzyme
ORQ91_01096	COG5584	Small secreted protein
ORQ91_01097	COG1363	Peptidase, m42
ORQ91_01100	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_01101	COG4848	Belongs to the UPF0354 family
ORQ91_01102	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ORQ91_01103	COG1674	ftsk spoiiie
ORQ91_01104	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ORQ91_01105	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
ORQ91_01106	COG4980	gas vesicle protein
ORQ91_01107	COG3118	belongs to the thioredoxin family
ORQ91_01108	COG1605	Chorismate mutase
ORQ91_01108	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
ORQ91_01109	COG1609	Transcriptional regulator
ORQ91_01110	COG0123	including yeast histone deacetylase and acetoin utilization protein
ORQ91_01111	COG0517	IMP dehydrogenase activity
ORQ91_01112	COG0454	-acetyltransferase
ORQ91_01113	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ORQ91_01114	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
ORQ91_01115	COG2329	Antibiotic biosynthesis monooxygenase
ORQ91_01116	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
ORQ91_01119	COG1335	isochorismatase
ORQ91_01121	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
ORQ91_01122	COG1956	GAF domain-containing protein
ORQ91_01123	COG1309	transcriptional regulator
ORQ91_01124	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ORQ91_01125	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
ORQ91_01126	COG1114	Component of the transport system for branched-chain amino acids
ORQ91_01127	COG1114	Component of the transport system for branched-chain amino acids
ORQ91_01128	COG1104	cysteine desulfurase activity
ORQ91_01129	COG0301	tRNA thio-modification
ORQ91_01131	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
ORQ91_01132	COG1279	arginine transmembrane transporter activity
ORQ91_01133	COG0402	S-adenosylhomocysteine deaminase activity
ORQ91_01134	COG0577	efflux transmembrane transporter activity
ORQ91_01135	COG1136	(ABC) transporter
ORQ91_01136	COG1695	Transcriptional regulator
ORQ91_01138	COG0772	Belongs to the SEDS family
ORQ91_01139	COG2205	protein histidine kinase activity
ORQ91_01140	COG0745	RESPONSE REGULATOR receiver
ORQ91_01141	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ORQ91_01142	COG2197	response regulator
ORQ91_01143	COG4585	Histidine kinase
ORQ91_01144	COG3239	Fatty acid desaturase
ORQ91_01146	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ORQ91_01147	COG0616	signal peptide processing
ORQ91_01148	COG1714	RDD family
ORQ91_01150	COG3874	Sporulation protein YtfJ
ORQ91_01151	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
ORQ91_01152	COG0827	DNA restriction-modification system
ORQ91_01153	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ORQ91_01155	COG0521	Mo-molybdopterin cofactor biosynthetic process
ORQ91_01156	COG0137	argininosuccinate synthase activity
ORQ91_01157	COG0165	Argininosuccinate lyase
ORQ91_01159	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_01160	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ORQ91_01161	COG4109	DRTGG domain
ORQ91_01163	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
ORQ91_01167	COG0587	DNA-directed DNA polymerase activity
ORQ91_01168	COG0281	malic enzyme
ORQ91_01169	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
ORQ91_01170	COG0825	malonyl-CoA metabolic process
ORQ91_01171	COG0205	6-phosphofructokinase activity
ORQ91_01173	COG3030	protein affecting phage T7 exclusion by the F plasmid
ORQ91_01174	COG0628	permease
ORQ91_01175	COG2707	UPF0756 membrane protein
ORQ91_01176	COG0372	Belongs to the citrate synthase family
ORQ91_01177	COG0538	isocitrate dehydrogenase activity
ORQ91_01178	COG0039	L-malate dehydrogenase activity
ORQ91_01179	COG0745	RESPONSE REGULATOR receiver
ORQ91_01180	COG5002	protein histidine kinase activity
ORQ91_01181	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ORQ91_01181	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ORQ91_01182	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
ORQ91_01183	COG1971	Probably functions as a manganese efflux pump
ORQ91_01184	COG0237	dephospho-CoA kinase activity
ORQ91_01185	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ORQ91_01186	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
ORQ91_01188	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
ORQ91_01189	COG3611	Membrane attachment protein
ORQ91_01190	COG1484	DNA-dependent DNA replication
ORQ91_01191	COG0398	Pfam SNARE associated Golgi protein
ORQ91_01193	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ORQ91_01195	COG1011	Hydrolase
ORQ91_01196	COG3275	phosphorelay sensor kinase activity
ORQ91_01197	COG3279	Response regulator of the LytR AlgR family
ORQ91_01199	COG1346	cytolysis
ORQ91_01200	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
ORQ91_01201	COG0291	Belongs to the bacterial ribosomal protein bL35 family
ORQ91_01202	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
ORQ91_01203	COG3326	Membrane
ORQ91_01205	COG1363	Peptidase, m42
ORQ91_01206	COG1966	Carbon starvation protein
ORQ91_01208	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ORQ91_01209	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
ORQ91_01210	COG0072	phenylalanine-tRNA ligase activity
ORQ91_01210	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ORQ91_01211	COG2801	Transposase and inactivated derivatives
ORQ91_01213	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ORQ91_01214	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
ORQ91_01215	COG1286	toxin biosynthetic process
ORQ91_01216	COG1796	DNA polymerase
ORQ91_01216	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
ORQ91_01217	COG1193	negative regulation of DNA recombination
ORQ91_01218	COG3766	membrane
ORQ91_01220	COG0318	PFAM AMP-dependent synthetase and ligase
ORQ91_01221	COG1309	transcriptional regulator
ORQ91_01222	COG1024	Enoyl-CoA hydratase
ORQ91_01223	COG2086	electron transfer activity
ORQ91_01224	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
ORQ91_01225	COG3534	alpha-L-arabinofuranosidase
ORQ91_01226	COG3118	belongs to the thioredoxin family
ORQ91_01227	COG0322	excinuclease ABC activity
ORQ91_01228	COG0527	aspartate kinase activity
ORQ91_01229	COG1719	4-vinyl reductase, 4VR
ORQ91_01230	COG2009	succinate dehydrogenase
ORQ91_01231	COG1053	succinate dehydrogenase
ORQ91_01232	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ORQ91_01233	COG0824	Thioesterase
ORQ91_01235	COG2828	Protein conserved in bacteria
ORQ91_01236	COG0583	DNA-binding transcription factor activity
ORQ91_01237	COG2851	Citrate transporter
ORQ91_01238	COG2197	response regulator
ORQ91_01239	COG1846	Transcriptional regulator
ORQ91_01240	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
ORQ91_01241	COG5401	PFAM Sporulation and spore germination
ORQ91_01242	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
ORQ91_01243	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
ORQ91_01244	COG0622	Phosphoesterase
ORQ91_01247	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_01250	COG2801	Transposase and inactivated derivatives
ORQ91_01256	COG0346	lactoylglutathione lyase activity
ORQ91_01259	COG1696	Membrane protein involved in D-alanine export
ORQ91_01260	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ORQ91_01261	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
ORQ91_01262	COG3339	Conserved Protein
ORQ91_01263	COG2706	6-phosphogluconolactonase activity
ORQ91_01264	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ORQ91_01265	COG0028	Belongs to the TPP enzyme family
ORQ91_01266	COG0440	acetolactate synthase activity
ORQ91_01267	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
ORQ91_01268	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ORQ91_01269	COG0473	3-isopropylmalate dehydrogenase activity
ORQ91_01270	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
ORQ91_01271	COG0066	3-isopropylmalate dehydratase activity
ORQ91_01272	COG1477	protein flavinylation
ORQ91_01272	COG0457	Tetratricopeptide repeat
ORQ91_01273	COG0544	peptidyl-prolyl cis-trans isomerase activity
ORQ91_01274	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
ORQ91_01275	COG0470	DNA polymerase III
ORQ91_01275	COG1067	ATP-dependent peptidase activity
ORQ91_01276	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ORQ91_01277	COG0218	Necessary for normal cell division and for the maintenance of normal septation
ORQ91_01279	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
ORQ91_01280	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ORQ91_01281	COG0181	hydroxymethylbilane synthase activity
ORQ91_01282	COG1587	Uroporphyrinogen-III synthase
ORQ91_01283	COG0113	porphobilinogen synthase activity
ORQ91_01284	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ORQ91_01285	COG1388	LysM domain
ORQ91_01286	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ORQ91_01288	COG0525	valine-tRNA ligase activity
ORQ91_01289	COG0285	dihydrofolate synthase activity
ORQ91_01290	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
ORQ91_01292	COG0424	maF-like protein
ORQ91_01293	COG2003	Belongs to the UPF0758 family
ORQ91_01294	COG1077	Cell shape determining protein MreB Mrl
ORQ91_01296	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ORQ91_01297	COG0850	regulation of cytokinetic process
ORQ91_01298	COG2894	cell division
ORQ91_01299	COG0739	heme binding
ORQ91_01300	COG1994	Peptidase M50
ORQ91_01301	COG0261	This protein binds to 23S rRNA in the presence of protein L20
ORQ91_01302	COG2868	ribosomal protein
ORQ91_01303	COG0211	Belongs to the bacterial ribosomal protein bL27 family
ORQ91_01304	COG3290	protein histidine kinase activity
ORQ91_01305	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
ORQ91_01306	COG4492	Belongs to the UPF0735 family
ORQ91_01307	COG0077	Prephenate dehydratase
ORQ91_01308	COG1827	regulation of RNA biosynthetic process
ORQ91_01309	COG1104	cysteine desulfurase activity
ORQ91_01310	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ORQ91_01311	COG0157	Belongs to the NadC ModD family
ORQ91_01312	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
ORQ91_01313	COG1388	LysM domain
ORQ91_01316	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
ORQ91_01319	COG2112	serine threonine protein kinase
ORQ91_01321	COG0632	four-way junction helicase activity
ORQ91_01322	COG2255	four-way junction helicase activity
ORQ91_01324	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
ORQ91_01325	COG0343	queuine tRNA-ribosyltransferase activity
ORQ91_01326	COG1862	Preprotein translocase
ORQ91_01328	COG2323	membrane
ORQ91_01329	COG2244	polysaccharide biosynthetic process
ORQ91_01331	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ORQ91_01331	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ORQ91_01332	COG0490	domain, Protein
ORQ91_01333	COG5416	Lipopolysaccharide assembly protein A domain
ORQ91_01334	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ORQ91_01334	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
ORQ91_01335	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ORQ91_01336	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ORQ91_01337	COG1490	D-aminoacyl-tRNA deacylase activity
ORQ91_01338	COG4991	sh3 domain protein
ORQ91_01338	COG0860	N-Acetylmuramoyl-L-alanine amidase
ORQ91_01338	COG3103	Sh3 type 3 domain protein
ORQ91_01340	COG0124	histidyl-tRNA synthetase
ORQ91_01342	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ORQ91_01343	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ORQ91_01344	COG1959	2 iron, 2 sulfur cluster binding
ORQ91_01345	COG1104	cysteine desulfurase activity
ORQ91_01346	COG0482	sulfurtransferase activity
ORQ91_01347	COG0457	Tetratricopeptide repeat
ORQ91_01348	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ORQ91_01349	COG3881	PFAM PRC-barrel domain
ORQ91_01352	COG0765	amino acid transport
ORQ91_01353	COG0765	amino acid transport
ORQ91_01354	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_01355	COG1126	abc transporter atp-binding protein
ORQ91_01356	COG0628	permease
ORQ91_01357	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
ORQ91_01358	COG4472	Bacterial protein of unknown function (DUF965)
ORQ91_01359	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
ORQ91_01360	COG3906	Belongs to the UPF0473 family
ORQ91_01361	COG1268	BioY protein
ORQ91_01362	COG0318	PFAM AMP-dependent synthetase and ligase
ORQ91_01363	COG0183	Belongs to the thiolase family
ORQ91_01364	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ORQ91_01365	COG4122	O-methyltransferase activity
ORQ91_01366	COG0826	peptidase U32
ORQ91_01367	COG0826	peptidase U32
ORQ91_01368	COG0572	uridine kinase
ORQ91_01369	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ORQ91_01370	COG0768	penicillin binding
ORQ91_01373	COG2226	methyltransferase
ORQ91_01374	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ORQ91_01375	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ORQ91_01376	COG0626	cystathionine gamma-synthase activity
ORQ91_01381	COG2226	methyltransferase
ORQ91_01382	COG1063	alcohol dehydrogenase
ORQ91_01383	COG2226	methyltransferase
ORQ91_01384	COG0454	-acetyltransferase
ORQ91_01385	COG1132	(ABC) transporter
ORQ91_01386	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_01388	COG1063	alcohol dehydrogenase
ORQ91_01389	COG3546	catalase activity
ORQ91_01391	COG0765	amino acid transport
ORQ91_01392	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_01393	COG1126	abc transporter atp-binding protein
ORQ91_01394	COG1960	acyl-CoA dehydrogenase activity
ORQ91_01395	COG2602	Beta-lactamase
ORQ91_01398	COG0657	acetylesterase activity
ORQ91_01404	COG1609	Transcriptional regulator
ORQ91_01407	COG2160	L-arabinose isomerase activity
ORQ91_01411	COG1131	(ABC) transporter
ORQ91_01418	COG0726	polysaccharide deacetylase
ORQ91_01423	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ORQ91_01424	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ORQ91_01425	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_01428	COG2186	Transcriptional regulator
ORQ91_01430	COG0457	Tetratricopeptide repeat
ORQ91_01432	COG2755	lipolytic protein G-D-S-L family
ORQ91_01434	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
ORQ91_01435	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ORQ91_01436	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ORQ91_01437	COG1534	Rna-binding protein
ORQ91_01438	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
ORQ91_01439	COG1713	HD superfamily hydrolase involved in NAD metabolism
ORQ91_01440	COG0799	negative regulation of ribosome biogenesis
ORQ91_01441	COG2226	methyltransferase
ORQ91_01442	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ORQ91_01443	COG1555	photosystem II stabilization
ORQ91_01444	COG2131	deaminase
ORQ91_01445	COG0658	competence protein
ORQ91_01445	COG2333	competence protein COMEC
ORQ91_01447	COG1466	dna polymerase III delta subunit
ORQ91_01448	COG0268	Binds directly to 16S ribosomal RNA
ORQ91_01449	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ORQ91_01450	COG0860	N-Acetylmuramoyl-L-alanine amidase
ORQ91_01452	COG0481	GTPase activity
ORQ91_01453	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ORQ91_01454	COG1420	regulation of RNA biosynthetic process
ORQ91_01455	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
ORQ91_01456	COG0443	Heat shock 70 kDa protein
ORQ91_01457	COG0484	heat shock protein binding
ORQ91_01458	COG2264	protein methyltransferase activity
ORQ91_01459	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ORQ91_01460	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ORQ91_01461	COG1283	sodium-dependent phosphate transmembrane transporter activity
ORQ91_01463	COG1610	YqeY-like protein
ORQ91_01464	COG1030	water channel activity
ORQ91_01465	COG4864	UPF0365 protein
ORQ91_01468	COG0561	phosphatase activity
ORQ91_01469	COG1702	phosphate starvation-inducible protein PhoH
ORQ91_01470	COG1480	7TM receptor with intracellular HD hydrolase
ORQ91_01471	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
ORQ91_01472	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ORQ91_01473	COG0295	cytidine deaminase activity
ORQ91_01474	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
ORQ91_01476	COG1381	Involved in DNA repair and RecF pathway recombination
ORQ91_01477	COG0752	glycyl-tRNA synthetase alpha subunit
ORQ91_01478	COG0751	glycine-tRNA ligase activity
ORQ91_01479	COG0517	IMP dehydrogenase activity
ORQ91_01480	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
ORQ91_01481	COG1671	Belongs to the UPF0178 family
ORQ91_01482	COG0358	DNA primase activity
ORQ91_01483	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ORQ91_01484	COG2010	Cytochrome c
ORQ91_01485	COG2384	SAM-dependent methyltransferase
ORQ91_01486	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ORQ91_01487	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
ORQ91_01489	COG0513	Belongs to the DEAD box helicase family
ORQ91_01492	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ORQ91_01493	COG1121	(ABC) transporter
ORQ91_01494	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ORQ91_01495	COG0735	belongs to the Fur family
ORQ91_01496	COG1940	carbohydrate kinase activity
ORQ91_01497	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
ORQ91_01498	COG4709	membrane
ORQ91_01499	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
ORQ91_01500	COG1388	LysM domain
ORQ91_01501	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ORQ91_01502	COG5521	maltodextrose utilization protein MalA
ORQ91_01503	COG2839	Protein conserved in bacteria
ORQ91_01504	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ORQ91_01505	COG0477	Major facilitator Superfamily
ORQ91_01506	COG0768	penicillin binding
ORQ91_01507	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ORQ91_01508	COG0573	inorganic phosphate transmembrane transporter activity
ORQ91_01509	COG0581	inorganic phosphate transmembrane transporter activity
ORQ91_01510	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ORQ91_01511	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ORQ91_01512	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ORQ91_01514	COG0267	Belongs to the bacterial ribosomal protein bL33 family
ORQ91_01515	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ORQ91_01517	COG0457	Tetratricopeptide repeat
ORQ91_01517	COG0705	Rhomboid family
ORQ91_01518	COG4483	Protein conserved in bacteria
ORQ91_01519	COG1940	carbohydrate kinase activity
ORQ91_01520	COG1368	sulfuric ester hydrolase activity
ORQ91_01521	COG2866	Carboxypeptidase
ORQ91_01522	COG2814	Major facilitator Superfamily
ORQ91_01523	COG0011	TIGRFAM Protein of
ORQ91_01525	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ORQ91_01527	COG1393	Belongs to the ArsC family
ORQ91_01529	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_01530	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ORQ91_01531	COG1459	type II secretion system
ORQ91_01532	COG4537	Required for transformation and DNA binding
ORQ91_01533	COG4970	Tfp pilus assembly protein FimT
ORQ91_01540	COG0681	Belongs to the peptidase S26 family
ORQ91_01545	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
ORQ91_01546	COG0404	The glycine cleavage system catalyzes the degradation of glycine
ORQ91_01547	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ORQ91_01548	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
ORQ91_01549	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ORQ91_01550	COG0095	Lipoate-protein ligase
ORQ91_01551	COG1321	iron dependent repressor
ORQ91_01552	COG1752	Esterase of the alpha-beta hydrolase superfamily
ORQ91_01554	COG3872	metal-dependent enzyme
ORQ91_01556	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
ORQ91_01557	COG0006	proline dipeptidase activity
ORQ91_01558	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
ORQ91_01560	COG3854	ATPases associated with a variety of cellular activities
ORQ91_01568	COG0511	ligase activity, forming carbon-carbon bonds
ORQ91_01569	COG0439	Biotin carboxylase
ORQ91_01570	COG1302	Protein conserved in bacteria
ORQ91_01571	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ORQ91_01572	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
ORQ91_01573	COG1570	exodeoxyribonuclease VII activity
ORQ91_01574	COG1722	exodeoxyribonuclease VII activity
ORQ91_01575	COG0142	geranyltranstransferase activity
ORQ91_01576	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ORQ91_01577	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
ORQ91_01578	COG1438	arginine binding
ORQ91_01579	COG0497	DNA recombination
ORQ91_01580	COG0750	zinc metalloprotease
ORQ91_01581	COG0745	RESPONSE REGULATOR receiver
ORQ91_01583	COG0457	Tetratricopeptide repeat
ORQ91_01585	COG0584	glycerophosphoryl diester phosphodiesterase
ORQ91_01587	COG3290	protein histidine kinase activity
ORQ91_01587	COG3829	transcription factor binding
ORQ91_01588	COG0280	phosphate acetyltransferase
ORQ91_01589	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ORQ91_01590	COG3426	butyrate kinase activity
ORQ91_01591	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ORQ91_01592	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ORQ91_01593	COG0022	dehydrogenase e1 component
ORQ91_01594	COG0508	dehydrogenase complex catalyzes the overall conversion of
ORQ91_01596	COG1597	lipid kinase activity
ORQ91_01598	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_01599	COG0765	amino acid transport
ORQ91_01600	COG1126	abc transporter atp-binding protein
ORQ91_01601	COG4129	membrane
ORQ91_01602	COG1376	ErfK ybiS ycfS ynhG family protein
ORQ91_01603	COG0346	lactoylglutathione lyase activity
ORQ91_01604	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ORQ91_01605	COG2195	Cleaves the N-terminal amino acid of tripeptides
ORQ91_01607	COG0706	membrane insertase activity
ORQ91_01610	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ORQ91_01611	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
ORQ91_01613	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_01614	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ORQ91_01615	COG1447	Phosphotransferase system cellobiose-specific component IIA
ORQ91_01616	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ORQ91_01617	COG2723	6-phospho-beta-galactosidase activity
ORQ91_01618	COG2188	Transcriptional regulator
ORQ91_01619	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ORQ91_01620	COG1234	tRNA 3'-trailer cleavage
ORQ91_01621	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ORQ91_01622	COG0596	Alpha beta hydrolase
ORQ91_01623	COG1902	pentaerythritol trinitrate reductase activity
ORQ91_01624	COG4187	Peptidase family M20/M25/M40
ORQ91_01626	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ORQ91_01627	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ORQ91_01628	COG0300	oxidoreductase activity
ORQ91_01629	COG0446	pyridine nucleotide-disulphide oxidoreductase
ORQ91_01630	COG1072	(Pantothenic acid kinase))
ORQ91_01631	COG2211	Major facilitator Superfamily
ORQ91_01633	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ORQ91_01635	COG0456	acetyltransferase
ORQ91_01636	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ORQ91_01636	COG0456	acetyltransferase
ORQ91_01637	COG4918	Iron-sulphur cluster biosynthesis
ORQ91_01639	COG0457	Tetratricopeptide repeat
ORQ91_01640	COG1073	alpha beta
ORQ91_01643	COG0667	Aldo Keto reductase
ORQ91_01644	COG0494	nUDIX hydrolase
ORQ91_01645	COG1379	DNA repair
ORQ91_01646	COG2153	protein acetylation
ORQ91_01648	COG1404	Belongs to the peptidase S8 family
ORQ91_01649	COG1300	Membrane
ORQ91_01650	COG0735	belongs to the Fur family
ORQ91_01652	COG4974	Belongs to the 'phage' integrase family
ORQ91_01653	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
ORQ91_01654	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
ORQ91_01655	COG1686	Belongs to the peptidase S11 family
ORQ91_01657	COG2172	sigma factor antagonist activity
ORQ91_01658	COG1191	sigma factor activity
ORQ91_01662	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ORQ91_01665	COG0697	spore germination
ORQ91_01666	COG0019	diaminopimelate decarboxylase activity
ORQ91_01667	COG4086	secreted protein
ORQ91_01668	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ORQ91_01669	COG2814	Major facilitator Superfamily
ORQ91_01673	COG0307	riboflavin synthase, alpha
ORQ91_01674	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ORQ91_01674	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ORQ91_01675	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
ORQ91_01676	COG0456	acetyltransferase
ORQ91_01677	COG1547	Domain of unknown function (DUF309)
ORQ91_01679	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
ORQ91_01680	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
ORQ91_01682	COG1686	Belongs to the peptidase S11 family
ORQ91_01683	COG2715	membrane protein required for spore maturation
ORQ91_01684	COG0700	Nucleoside recognition
ORQ91_01685	COG1187	pseudouridine synthase activity
ORQ91_01686	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_01687	COG1333	cytochrome c biogenesis protein
ORQ91_01688	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ORQ91_01689	COG0745	RESPONSE REGULATOR receiver
ORQ91_01690	COG5002	protein histidine kinase activity
ORQ91_01691	COG1595	DNA-templated transcription, initiation
ORQ91_01693	COG3409	Peptidoglycan-binding domain 1 protein
ORQ91_01693	COG5632	N-Acetylmuramoyl-L-alanine amidase
ORQ91_01694	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ORQ91_01695	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
ORQ91_01696	COG1141	Ferredoxin
ORQ91_01697	COG4955	Helix-turn-helix domain
ORQ91_01698	COG0514	ATP-dependent DNA helicase (RecQ)
ORQ91_01699	COG1266	CAAX protease self-immunity
ORQ91_01700	COG1388	LysM domain
ORQ91_01702	COG1408	metallophosphoesterase
ORQ91_01703	COG4862	establishment of competence for transformation
ORQ91_01704	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
ORQ91_01705	COG0492	ferredoxin-NADP+ reductase activity
ORQ91_01706	COG2339	peptidase activity
ORQ91_01707	COG3409	Peptidoglycan-binding domain 1 protein
ORQ91_01707	COG3773	Cell wall hydrolase
ORQ91_01708	COG2959	enzyme of heme biosynthesis
ORQ91_01709	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
ORQ91_01711	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
ORQ91_01712	COG0539	negative regulation of cytoplasmic translation
ORQ91_01713	COG1304	FMN binding
ORQ91_01718	COG1160	GTP binding
ORQ91_01719	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
ORQ91_01722	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ORQ91_01723	COG0776	regulation of translation
ORQ91_01724	COG0302	gtp cyclohydrolase
ORQ91_01726	COG0142	geranyltranstransferase activity
ORQ91_01727	COG2226	methyltransferase
ORQ91_01728	COG0142	geranyltranstransferase activity
ORQ91_01729	COG0105	UTP biosynthetic process
ORQ91_01730	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
ORQ91_01731	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
ORQ91_01732	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
ORQ91_01733	COG4401	Chorismate mutase type I
ORQ91_01736	COG0134	indole-3-glycerol-phosphate synthase activity
ORQ91_01738	COG0133	tryptophan synthase activity
ORQ91_01739	COG0159	tryptophan synthase activity
ORQ91_01740	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
ORQ91_01741	COG0287	Prephenate dehydrogenase
ORQ91_01742	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
ORQ91_01743	COG0457	Tetratricopeptide repeat
ORQ91_01744	COG5582	Belongs to the UPF0302 family
ORQ91_01746	COG0723	plastoquinol--plastocyanin reductase activity
ORQ91_01747	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ORQ91_01748	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
ORQ91_01748	COG2010	Cytochrome c
ORQ91_01749	COG4347	Protein of unknown function (DUF1405)
ORQ91_01751	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ORQ91_01752	COG1694	Mazg nucleotide pyrophosphohydrolase
ORQ91_01753	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
ORQ91_01754	COG1803	Methylglyoxal synthase
ORQ91_01755	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ORQ91_01756	COG0438	transferase activity, transferring glycosyl groups
ORQ91_01757	COG0617	tRNA 3'-terminal CCA addition
ORQ91_01759	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
ORQ91_01760	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ORQ91_01761	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ORQ91_01762	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ORQ91_01762	COG1199	ATP-dependent helicase activity
ORQ91_01764	COG5353	protein conserved in bacteria
ORQ91_01765	COG0017	Asparaginyl-tRNA synthetase
ORQ91_01766	COG3935	DnaD domain protein
ORQ91_01767	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ORQ91_01769	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ORQ91_01769	COG4499	WXG100 protein secretion system (Wss), protein YukC
ORQ91_01770	COG3331	DNA recombination
ORQ91_01776	COG0071	Belongs to the small heat shock protein (HSP20) family
ORQ91_01777	COG2190	(PTS) system
ORQ91_01778	COG1902	pentaerythritol trinitrate reductase activity
ORQ91_01779	COG1111	helicase
ORQ91_01779	COG1205	dead DEAH box helicase
ORQ91_01780	COG3359	exonuclease
ORQ91_01783	COG4474	Belongs to the UPF0398 family
ORQ91_01784	COG3599	regulation of cell shape
ORQ91_01785	COG0116	Belongs to the methyltransferase superfamily
ORQ91_01787	COG1199	ATP-dependent helicase activity
ORQ91_01788	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
ORQ91_01789	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ORQ91_01790	COG2233	PERMEase
ORQ91_01791	COG0726	polysaccharide deacetylase
ORQ91_01793	COG3424	synthase
ORQ91_01794	COG1755	Isoprenylcysteine carboxyl methyltransferase
ORQ91_01795	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
ORQ91_01798	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
ORQ91_01800	COG0328	RNA-DNA hybrid ribonuclease activity
ORQ91_01801	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ORQ91_01802	COG0328	RNA-DNA hybrid ribonuclease activity
ORQ91_01805	COG1278	Cold shock
ORQ91_01807	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ORQ91_01808	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
ORQ91_01809	COG2759	Belongs to the formate--tetrahydrofolate ligase family
ORQ91_01810	COG0386	Belongs to the glutathione peroxidase family
ORQ91_01811	COG1418	mRNA catabolic process
ORQ91_01812	COG1413	lyase activity
ORQ91_01813	COG0129	dihydroxy-acid dehydratase activity
ORQ91_01815	COG2136	Putative SAM-dependent methyltransferase
ORQ91_01815	COG2521	methyltransferase
ORQ91_01817	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ORQ91_01818	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
ORQ91_01819	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ORQ91_01820	COG0204	Acyl-transferase
ORQ91_01821	COG1272	protein, Hemolysin III
ORQ91_01822	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
ORQ91_01823	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ORQ91_01826	COG1999	signal sequence binding
ORQ91_01827	COG2755	lipolytic protein G-D-S-L family
ORQ91_01828	COG4698	Protein conserved in bacteria
ORQ91_01832	COG1846	Transcriptional regulator
ORQ91_01833	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ORQ91_01834	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
ORQ91_01835	COG1086	Polysaccharide biosynthesis protein
ORQ91_01837	COG4641	Protein conserved in bacteria
ORQ91_01840	COG0463	Glycosyl transferase, family 2
ORQ91_01841	COG3829	transcription factor binding
ORQ91_01842	COG1509	lysine 2,3-aminomutase activity
ORQ91_01844	COG4479	Belongs to the UPF0346 family
ORQ91_01847	COG0671	phosphoesterase, PA-phosphatase related
ORQ91_01849	COG0813	purine-nucleoside phosphorylase activity
ORQ91_01850	COG1876	peptidase activity
ORQ91_01852	COG2226	methyltransferase
ORQ91_01853	COG0793	Belongs to the peptidase S41A family
ORQ91_01853	COG3409	Peptidoglycan-binding domain 1 protein
ORQ91_01854	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ORQ91_01856	COG0778	Nitroreductase
ORQ91_01857	COG1733	regulation of RNA biosynthetic process
ORQ91_01860	COG2962	Rard protein
ORQ91_01862	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ORQ91_01863	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ORQ91_01865	COG0534	Mate efflux family protein
ORQ91_01867	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ORQ91_01868	COG0791	NLP P60 protein
ORQ91_01868	COG1388	LysM domain
ORQ91_01869	COG2032	superoxide dismutase activity
ORQ91_01870	COG0714	Associated with various cellular activities
ORQ91_01871	COG4548	von Willebrand factor, type A
ORQ91_01872	COG0567	Dehydrogenase, E1 component
ORQ91_01873	COG0508	dehydrogenase complex catalyzes the overall conversion of
ORQ91_01874	COG0385	Bile acid
ORQ91_01875	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ORQ91_01876	COG1657	PFAM Prenyltransferase squalene oxidase
ORQ91_01877	COG1012	belongs to the aldehyde dehydrogenase family
ORQ91_01882	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ORQ91_01883	COG0514	ATP-dependent DNA helicase (RecQ)
ORQ91_01884	COG1388	LysM domain
ORQ91_01884	COG3584	3D domain protein
ORQ91_01886	COG2322	membrane
ORQ91_01887	COG0372	Belongs to the citrate synthase family
ORQ91_01888	COG2079	MmgE PrpD family protein
ORQ91_01889	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
ORQ91_01890	COG0741	lytic transglycosylase activity
ORQ91_01891	COG0531	amino acid
ORQ91_01892	COG0640	Transcriptional regulator
ORQ91_01894	COG2378	regulation of single-species biofilm formation
ORQ91_01895	COG3708	Transcriptional regulator
ORQ91_01896	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ORQ91_01897	COG1309	transcriptional regulator
ORQ91_01901	COG1994	Peptidase M50
ORQ91_01902	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ORQ91_01903	COG2211	Major facilitator Superfamily
ORQ91_01906	COG2115	Belongs to the xylose isomerase family
ORQ91_01907	COG1070	Carbohydrate kinase
ORQ91_01909	COG0243	molybdopterin cofactor binding
ORQ91_01912	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ORQ91_01913	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ORQ91_01914	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ORQ91_01915	COG0454	-acetyltransferase
ORQ91_01916	COG4978	Transcriptional regulator
ORQ91_01916	COG0789	Transcriptional regulator
ORQ91_01917	COG1132	(ABC) transporter
ORQ91_01919	COG0583	DNA-binding transcription factor activity
ORQ91_01920	COG0067	glutamate synthase
ORQ91_01920	COG0069	glutamate synthase activity
ORQ91_01920	COG0070	glutamate synthase
ORQ91_01921	COG0493	'glutamate synthase
ORQ91_01922	COG2223	nitrite transmembrane transporter activity
ORQ91_01923	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ORQ91_01924	COG0243	molybdopterin cofactor binding
ORQ91_01925	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ORQ91_01926	COG2146	nitrite reductase [NAD(P)H] activity
ORQ91_01927	COG2323	membrane
ORQ91_01928	COG4677	pectinesterase activity
ORQ91_01929	COG2027	D-alanyl-D-alanine carboxypeptidase
ORQ91_01930	COG0534	Mate efflux family protein
ORQ91_01932	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ORQ91_01934	COG1587	Uroporphyrinogen-III synthase
ORQ91_01935	COG0586	Pfam SNARE associated Golgi protein
ORQ91_01936	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ORQ91_01937	COG2246	polysaccharide biosynthetic process
ORQ91_01938	COG0166	Belongs to the GPI family
ORQ91_01944	COG0247	lactate metabolic process
ORQ91_01945	COG0277	FAD linked oxidase domain protein
ORQ91_01946	COG3835	regulator
ORQ91_01948	COG1349	DNA-binding transcription factor activity
ORQ91_01949	COG2365	Tyrosine phosphatase family
ORQ91_01950	COG1649	PFAM Uncharacterised BCR, COG1649
ORQ91_01951	COG1960	acyl-CoA dehydrogenase activity
ORQ91_01952	COG0318	PFAM AMP-dependent synthetase and ligase
ORQ91_01953	COG0439	Biotin carboxylase
ORQ91_01954	COG0511	ligase activity, forming carbon-carbon bonds
ORQ91_01955	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ORQ91_01956	COG1024	Enoyl-CoA hydratase
ORQ91_01957	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
ORQ91_01959	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ORQ91_01960	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ORQ91_01966	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ORQ91_01968	COG1105	Belongs to the carbohydrate kinase PfkB family
ORQ91_01969	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_01969	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_01969	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_01970	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_01970	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_01970	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_01972	COG2814	Major facilitator Superfamily
ORQ91_01973	COG1846	Transcriptional regulator
ORQ91_01974	COG5444	nuclease activity
ORQ91_01982	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_01985	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ORQ91_01986	COG1609	Transcriptional regulator
ORQ91_01987	COG1653	transport
ORQ91_01988	COG1175	transmembrane transport
ORQ91_01989	COG0395	ABC-type sugar transport system, permease component
ORQ91_01990	COG1486	melibiose metabolic process
ORQ91_01992	COG1082	Xylose isomerase domain protein TIM barrel
ORQ91_01993	COG2814	Major facilitator Superfamily
ORQ91_01994	COG0191	fructose-bisphosphate aldolase activity
ORQ91_01995	COG1349	DNA-binding transcription factor activity
ORQ91_01996	COG3962	Belongs to the TPP enzyme family
ORQ91_01997	COG3718	enzyme involved in inositol metabolism
ORQ91_01999	COG1012	belongs to the aldehyde dehydrogenase family
ORQ91_02000	COG0673	inositol 2-dehydrogenase activity
ORQ91_02002	COG3507	Belongs to the glycosyl hydrolase 43 family
ORQ91_02004	COG0745	RESPONSE REGULATOR receiver
ORQ91_02005	COG2205	protein histidine kinase activity
ORQ91_02008	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_02008	COG1263	PTS System
ORQ91_02008	COG2190	(PTS) system
ORQ91_02009	COG2723	6-phospho-beta-galactosidase activity
ORQ91_02010	COG0789	Transcriptional regulator
ORQ91_02011	COG0657	acetylesterase activity
ORQ91_02015	COG0583	DNA-binding transcription factor activity
ORQ91_02018	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ORQ91_02025	COG0251	oxidation-reduction process
ORQ91_02026	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ORQ91_02027	COG2409	Drug exporters of the RND superfamily
ORQ91_02028	COG4585	Histidine kinase
ORQ91_02029	COG2197	response regulator
ORQ91_02030	COG3292	Two component regulator propeller
ORQ91_02030	COG0745	RESPONSE REGULATOR receiver
ORQ91_02030	COG2205	protein histidine kinase activity
ORQ91_02031	COG1070	Carbohydrate kinase
ORQ91_02032	COG4806	L-rhamnose isomerase
ORQ91_02033	COG0247	lactate metabolic process
ORQ91_02034	COG1139	Iron-sulfur cluster binding protein
ORQ91_02036	COG1733	regulation of RNA biosynthetic process
ORQ91_02037	COG2249	NAD(P)H dehydrogenase (quinone) activity
ORQ91_02038	COG0110	maltose O-acetyltransferase activity
ORQ91_02039	COG0738	Major facilitator superfamily
ORQ91_02042	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ORQ91_02043	COG0187	DNA topoisomerase II activity
ORQ91_02044	COG1832	CoA-binding protein
ORQ91_02045	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
ORQ91_02046	COG4841	protein insertion into membrane
ORQ91_02048	COG0824	Thioesterase
ORQ91_02052	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_02053	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ORQ91_02056	COG0071	Belongs to the small heat shock protein (HSP20) family
ORQ91_02058	COG4846	Membrane protein involved in cytochrome C biogenesis
ORQ91_02059	COG0785	Cytochrome C biogenesis protein
ORQ91_02060	COG3763	UPF0154 protein
ORQ91_02062	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ORQ91_02063	COG4224	UPF0291 protein
ORQ91_02064	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ORQ91_02065	COG1388	LysM domain
ORQ91_02066	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ORQ91_02069	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_02070	COG3209	COG3209 Rhs family protein
ORQ91_02071	COG3591	Belongs to the peptidase S1B family
ORQ91_02072	COG2124	cytochrome p450
ORQ91_02072	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
ORQ91_02073	COG1309	transcriptional regulator
ORQ91_02074	COG2323	membrane
ORQ91_02078	COG0702	epimerase
ORQ91_02079	COG1959	2 iron, 2 sulfur cluster binding
ORQ91_02080	COG0346	lactoylglutathione lyase activity
ORQ91_02081	COG4876	unkown
ORQ91_02082	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
ORQ91_02083	COG1793	dna ligase
ORQ91_02083	COG3285	dna ligase
ORQ91_02084	COG3619	membrane
ORQ91_02086	COG0457	Tetratricopeptide repeat
ORQ91_02087	COG5646	InterPro IPR014922
ORQ91_02091	COG5444	nuclease activity
ORQ91_02093	COG5444	nuclease activity
ORQ91_02095	COG0457	Tetratricopeptide repeat
ORQ91_02101	COG5444	nuclease activity
ORQ91_02102	COG0174	glutamine synthetase
ORQ91_02103	COG0789	Transcriptional regulator
ORQ91_02104	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
ORQ91_02105	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ORQ91_02106	COG0464	growth
ORQ91_02107	COG0860	N-Acetylmuramoyl-L-alanine amidase
ORQ91_02108	COG4112	unkown
ORQ91_02109	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ORQ91_02110	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ORQ91_02111	COG1780	Probably involved in ribonucleotide reductase function
ORQ91_02114	COG1923	regulation of RNA biosynthetic process
ORQ91_02115	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
ORQ91_02120	COG2076	Multidrug Resistance protein
ORQ91_02121	COG1764	response to oxidative stress
ORQ91_02122	COG4195	phage-related replication protein
ORQ91_02123	COG1404	Belongs to the peptidase S8 family
ORQ91_02124	COG0457	Tetratricopeptide repeat
ORQ91_02125	COG4195	phage-related replication protein
ORQ91_02126	COG1329	Transcriptional regulator
ORQ91_02129	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
ORQ91_02130	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
ORQ91_02132	COG4550	Control of competence regulator ComK, YlbF/YmcA
ORQ91_02133	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
ORQ91_02135	COG0156	8-amino-7-oxononanoate synthase activity
ORQ91_02136	COG1063	alcohol dehydrogenase
ORQ91_02137	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ORQ91_02138	COG2359	stage V sporulation protein S
ORQ91_02139	COG1692	metallophosphoesterase
ORQ91_02140	COG1418	mRNA catabolic process
ORQ91_02141	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ORQ91_02142	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
ORQ91_02143	COG1058	Belongs to the CinA family
ORQ91_02143	COG1546	Belongs to the CinA family
ORQ91_02144	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ORQ91_02145	COG1426	Protein conserved in bacteria
ORQ91_02148	COG0300	oxidoreductase activity
ORQ91_02149	COG2409	Drug exporters of the RND superfamily
ORQ91_02149	COG1033	growth of symbiont in host cell
ORQ91_02151	COG0612	Peptidase, M16
ORQ91_02152	COG0612	Peptidase, M16
ORQ91_02153	COG1033	growth of symbiont in host cell
ORQ91_02153	COG2409	Drug exporters of the RND superfamily
ORQ91_02154	COG2814	Major facilitator Superfamily
ORQ91_02155	COG2188	Transcriptional regulator
ORQ91_02156	COG4980	gas vesicle protein
ORQ91_02156	COG1674	ftsk spoiiie
ORQ91_02158	COG0740	serine-type endopeptidase activity
ORQ91_02159	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ORQ91_02161	COG0527	aspartate kinase activity
ORQ91_02162	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ORQ91_02163	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ORQ91_02164	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ORQ91_02165	COG1873	PFAM PRC-barrel domain
ORQ91_02167	COG0612	Peptidase, M16
ORQ91_02168	COG0726	polysaccharide deacetylase
ORQ91_02169	COG1185	polyribonucleotide nucleotidyltransferase activity
ORQ91_02170	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
ORQ91_02171	COG0196	riboflavin kinase activity
ORQ91_02172	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
ORQ91_02173	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
ORQ91_02174	COG1550	Protein conserved in bacteria
ORQ91_02175	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
ORQ91_02176	COG1358	cellular component organization or biogenesis
ORQ91_02177	COG2740	Nucleic-acid-binding protein implicated in transcription termination
ORQ91_02178	COG0195	Participates in both transcription termination and antitermination
ORQ91_02179	COG0779	Required for maturation of 30S ribosomal subunits
ORQ91_02181	COG3693	PFAM glycoside hydrolase, family 10
ORQ91_02184	COG2176	DNA-directed DNA polymerase activity
ORQ91_02185	COG0442	prolyl-tRNA aminoacylation
ORQ91_02186	COG0750	zinc metalloprotease
ORQ91_02187	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ORQ91_02188	COG4589	Belongs to the CDS family
ORQ91_02189	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
ORQ91_02190	COG0233	cytoplasmic translational termination
ORQ91_02191	COG0528	UMP kinase activity
ORQ91_02192	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
ORQ91_02195	COG1191	sigma factor activity
ORQ91_02197	COG1776	CheC inhibitor of MCP methylation
ORQ91_02198	COG0835	chemotaxis
ORQ91_02199	COG2198	Histidine kinase
ORQ91_02199	COG0643	Histidine kinase
ORQ91_02200	COG2201	protein-glutamate methylesterase activity
ORQ91_02201	COG0455	bacterial-type flagellum organization
ORQ91_02202	COG1419	protein localization to endoplasmic reticulum
ORQ91_02203	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ORQ91_02204	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
ORQ91_02205	COG1684	flagellar biosynthetic protein fliR
ORQ91_02206	COG1987	bacterial-type flagellum assembly
ORQ91_02207	COG1338	Plays a role in the flagellum-specific transport system
ORQ91_02208	COG3190	flagellar
ORQ91_02209	COG2201	protein-glutamate methylesterase activity
ORQ91_02210	COG1776	CheC inhibitor of MCP methylation
ORQ91_02210	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ORQ91_02211	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ORQ91_02212	COG1580	Controls the rotational direction of flagella during chemotaxis
ORQ91_02213	COG1582	Flagellar protein (FlbD)
ORQ91_02214	COG4786	Flagellar basal body rod
ORQ91_02215	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
ORQ91_02216	COG3144	bacterial-type flagellum assembly
ORQ91_02217	COG3334	PFAM MgtE intracellular
ORQ91_02218	COG2882	bacterial-type flagellum organization
ORQ91_02219	COG1157	protein secretion by the type III secretion system
ORQ91_02220	COG1317	bacterial-type flagellum organization
ORQ91_02221	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ORQ91_02222	COG1766	The M ring may be actively involved in energy transduction
ORQ91_02223	COG1677	Flagellar hook-basal body complex protein FliE
ORQ91_02224	COG1558	bacterial-type flagellum-dependent cell motility
ORQ91_02225	COG1815	bacterial-type flagellum-dependent cell motility
ORQ91_02226	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
ORQ91_02227	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
ORQ91_02228	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
ORQ91_02229	COG4974	Belongs to the 'phage' integrase family
ORQ91_02230	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
ORQ91_02231	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ORQ91_02232	COG0758	DNA mediated transformation
ORQ91_02233	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ORQ91_02234	COG0045	succinate-CoA ligase (ADP-forming) activity
ORQ91_02235	COG2257	FlhB HrpN YscU SpaS Family
ORQ91_02237	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
ORQ91_02238	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
ORQ91_02239	COG0335	large ribosomal subunit rRNA binding
ORQ91_02240	COG0336	Belongs to the RNA methyltransferase TrmD family
ORQ91_02241	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
ORQ91_02243	COG1837	Belongs to the UPF0109 family
ORQ91_02244	COG0228	four-way junction DNA binding
ORQ91_02245	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ORQ91_02246	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
ORQ91_02247	COG0552	protein localization to endoplasmic reticulum
ORQ91_02248	COG1196	nuclear chromosome segregation
ORQ91_02250	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ORQ91_02251	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_02252	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ORQ91_02253	COG0416	fatty acid biosynthetic process
ORQ91_02254	COG1349	DNA-binding transcription factor activity
ORQ91_02255	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ORQ91_02256	COG1760	l-serine dehydratase
ORQ91_02257	COG1760	l-serine dehydratase
ORQ91_02258	COG1461	Dihydroxyacetone kinase
ORQ91_02259	COG1302	Protein conserved in bacteria
ORQ91_02260	COG0227	Belongs to the bacterial ribosomal protein bL28 family
ORQ91_02261	COG1564	THIamine pyrophosphokinase
ORQ91_02262	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ORQ91_02263	COG1162	GTPase activity
ORQ91_02264	COG0515	serine threonine protein kinase
ORQ91_02264	COG2815	serine threonine protein kinase
ORQ91_02265	COG0631	protein serine/threonine phosphatase activity
ORQ91_02266	COG0820	rRNA (adenine-C2-)-methyltransferase activity
ORQ91_02267	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
ORQ91_02267	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
ORQ91_02268	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
ORQ91_02269	COG0242	peptide deformylase activity
ORQ91_02270	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ORQ91_02271	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ORQ91_02272	COG1758	RNA polymerase activity
ORQ91_02273	COG0194	GDP metabolic process
ORQ91_02274	COG2052	Domain of unknown function (DUF370)
ORQ91_02275	COG1561	YicC-like family, N-terminal region
ORQ91_02276	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ORQ91_02278	COG1648	precorrin-2 dehydrogenase activity
ORQ91_02279	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
ORQ91_02280	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
ORQ91_02281	COG0529	Catalyzes the synthesis of activated sulfate
ORQ91_02282	COG2046	Belongs to the sulfate adenylyltransferase family
ORQ91_02283	COG0306	phosphate transporter
ORQ91_02284	COG0175	sulfate reduction
ORQ91_02286	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
ORQ91_02287	COG0284	orotidine-5'-phosphate decarboxylase activity
ORQ91_02288	COG0167	dihydroorotate dehydrogenase activity
ORQ91_02289	COG0543	2 iron, 2 sulfur cluster binding
ORQ91_02290	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ORQ91_02291	COG0505	Belongs to the CarA family
ORQ91_02292	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
ORQ91_02293	COG0540	Belongs to the ATCase OTCase family
ORQ91_02294	COG2233	PERMEase
ORQ91_02295	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
ORQ91_02296	COG0564	pseudouridine synthase activity
ORQ91_02297	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ORQ91_02298	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ORQ91_02299	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
ORQ91_02300	COG3599	regulation of cell shape
ORQ91_02301	COG2302	S4 RNA-binding domain
ORQ91_02302	COG0762	integral membrane protein
ORQ91_02303	COG1799	cell septum assembly
ORQ91_02304	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ORQ91_02305	COG1496	oxidoreductase activity
ORQ91_02306	COG1873	PFAM PRC-barrel domain
ORQ91_02307	COG1119	ATPase activity
ORQ91_02309	COG3732	PTS system glucitol sorbitol-specific
ORQ91_02310	COG3730	PTS system glucitol sorbitol-specific
ORQ91_02313	COG2390	Transcriptional regulator
ORQ91_02314	COG1191	sigma factor activity
ORQ91_02315	COG1191	sigma factor activity
ORQ91_02317	COG1404	Belongs to the peptidase S8 family
ORQ91_02317	COG4412	M6 family metalloprotease domain protein
ORQ91_02318	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ORQ91_02319	COG0849	cell division
ORQ91_02320	COG3856	small basic protein
ORQ91_02321	COG3879	Bacterial protein of unknown function (DUF881)
ORQ91_02322	COG3879	Bacterial protein of unknown function (DUF881)
ORQ91_02323	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
ORQ91_02324	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ORQ91_02325	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
ORQ91_02326	COG0772	Belongs to the SEDS family
ORQ91_02327	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
ORQ91_02328	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ORQ91_02329	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
ORQ91_02330	COG0768	penicillin binding
ORQ91_02331	COG0768	penicillin binding
ORQ91_02332	COG4839	cell division protein FtsL
ORQ91_02333	COG0275	rRNA processing
ORQ91_02334	COG2001	Belongs to the MraZ family
ORQ91_02335	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
ORQ91_02336	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
ORQ91_02337	COG0454	-acetyltransferase
ORQ91_02339	COG0333	Belongs to the bacterial ribosomal protein bL32 family
ORQ91_02340	COG1399	metal-binding, possibly nucleic acid-binding protein
ORQ91_02342	COG3480	Lon protease (S16) C-terminal proteolytic domain
ORQ91_02343	COG1752	Esterase of the alpha-beta hydrolase superfamily
ORQ91_02344	COG3314	Sporulation integral membrane protein YlbJ
ORQ91_02345	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
ORQ91_02346	COG0742	ribosomal rna small subunit methyltransferase
ORQ91_02347	COG4471	UPF0298 protein
ORQ91_02348	COG3679	Belongs to the UPF0342 family
ORQ91_02352	COG2340	Cysteine-rich secretory protein family
ORQ91_02353	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
ORQ91_02355	COG2801	Transposase and inactivated derivatives
ORQ91_02357	COG3336	cytochrome c oxidase
ORQ91_02358	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ORQ91_02359	COG1845	cytochrome c oxidase, subunit III
ORQ91_02360	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ORQ91_02361	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ORQ91_02361	COG2010	Cytochrome c
ORQ91_02362	COG0109	protoheme IX farnesyltransferase activity
ORQ91_02363	COG1612	heme a metabolic process
ORQ91_02364	COG0415	Belongs to the DNA photolyase family
ORQ91_02365	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
ORQ91_02366	COG0772	Belongs to the SEDS family
ORQ91_02367	COG4838	Belongs to the UPF0358 family
ORQ91_02368	COG2066	Belongs to the glutaminase family
ORQ91_02369	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
ORQ91_02370	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
ORQ91_02372	COG4896	Protein conserved in bacteria
ORQ91_02374	COG1217	gtp-binding protein TYPA
ORQ91_02378	COG1595	DNA-templated transcription, initiation
ORQ91_02381	COG0483	inositol monophosphate 1-phosphatase activity
ORQ91_02383	COG4493	Belongs to the UPF0637 family
ORQ91_02384	COG4476	Belongs to the UPF0223 family
ORQ91_02385	COG1982	Orn Lys Arg decarboxylase major
ORQ91_02386	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_02387	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ORQ91_02388	COG0508	dehydrogenase complex catalyzes the overall conversion of
ORQ91_02389	COG0022	dehydrogenase e1 component
ORQ91_02390	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ORQ91_02393	COG0242	peptide deformylase activity
ORQ91_02394	COG0561	phosphatase activity
ORQ91_02395	COG5503	Protein of unknown function (DUF1447)
ORQ91_02396	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
ORQ91_02397	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ORQ91_02398	COG0569	domain protein
ORQ91_02399	COG2105	PFAM AIG2 family protein
ORQ91_02399	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
ORQ91_02400	COG3852	Histidine kinase
ORQ91_02401	COG2002	toxin-antitoxin pair type II binding
ORQ91_02402	COG1077	Cell shape determining protein MreB Mrl
ORQ91_02404	COG2309	aminopeptidase activity
ORQ91_02405	COG0488	(ABC) transporter
ORQ91_02407	COG0681	Belongs to the peptidase S26 family
ORQ91_02408	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_02408	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_02408	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_02409	COG1105	Belongs to the carbohydrate kinase PfkB family
ORQ91_02410	COG1349	DNA-binding transcription factor activity
ORQ91_02411	COG0577	efflux transmembrane transporter activity
ORQ91_02412	COG1136	(ABC) transporter
ORQ91_02413	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ORQ91_02416	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ORQ91_02417	COG0314	molybdopterin synthase activity
ORQ91_02418	COG1763	Mo-molybdopterin cofactor biosynthetic process
ORQ91_02419	COG0303	'Molybdopterin
ORQ91_02420	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ORQ91_02421	COG0746	molybdenum cofactor guanylyltransferase activity
ORQ91_02424	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_02425	COG0450	alkyl hydroperoxide reductase
ORQ91_02426	COG0668	transmembrane transport
ORQ91_02428	COG1473	amidohydrolase
ORQ91_02429	COG2171	N-acyltransferase activity
ORQ91_02430	COG0716	FMN binding
ORQ91_02432	COG0716	FMN binding
ORQ91_02434	COG0583	DNA-binding transcription factor activity
ORQ91_02435	COG0517	IMP dehydrogenase activity
ORQ91_02437	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
ORQ91_02438	COG4703	Protein of unknown function (DUF1797)
ORQ91_02439	COG3546	catalase activity
ORQ91_02440	COG2200	EAL domain
ORQ91_02441	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_02442	COG1408	metallophosphoesterase
ORQ91_02443	COG1376	ErfK ybiS ycfS ynhG family protein
ORQ91_02444	COG2814	Major facilitator Superfamily
ORQ91_02446	COG0697	spore germination
ORQ91_02447	COG0697	spore germination
ORQ91_02448	COG1917	Cupin 2, conserved barrel domain protein
ORQ91_02448	COG2207	Transcriptional regulator
ORQ91_02451	COG0835	chemotaxis
ORQ91_02451	COG0784	Response regulator, receiver
ORQ91_02453	COG1714	RDD family
ORQ91_02455	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ORQ91_02456	COG0436	Aminotransferase
ORQ91_02457	COG4191	Histidine kinase
ORQ91_02458	COG0768	penicillin binding
ORQ91_02459	COG2340	Cysteine-rich secretory protein family
ORQ91_02460	COG2084	Dehydrogenase
ORQ91_02462	COG0840	transmembrane signaling receptor activity
ORQ91_02463	COG1533	DNA photolyase activity
ORQ91_02465	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ORQ91_02466	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_02467	COG2190	(PTS) system
ORQ91_02467	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_02467	COG1263	PTS System
ORQ91_02468	COG3711	transcriptional antiterminator
ORQ91_02469	COG1609	Transcriptional regulator
ORQ91_02470	COG0006	proline dipeptidase activity
ORQ91_02471	COG2217	Heavy metal translocating P-type atpase
ORQ91_02472	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_02473	COG2244	polysaccharide biosynthetic process
ORQ91_02474	COG3773	Cell wall hydrolase
ORQ91_02476	COG4873	Protein conserved in bacteria
ORQ91_02478	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_02479	COG1733	regulation of RNA biosynthetic process
ORQ91_02480	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
ORQ91_02481	COG0602	queuosine metabolic process
ORQ91_02482	COG0720	synthase
ORQ91_02483	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
ORQ91_02484	COG3949	Membrane
ORQ91_02485	COG0542	response to heat
ORQ91_02487	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ORQ91_02488	COG1360	Flagellar Motor Protein
ORQ91_02489	COG1846	Transcriptional regulator
ORQ91_02490	COG3852	Histidine kinase
ORQ91_02492	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
ORQ91_02493	COG0235	Class ii aldolase
ORQ91_02494	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
ORQ91_02495	COG1850	ribulose-bisphosphate carboxylase activity
ORQ91_02496	COG0436	Aminotransferase
ORQ91_02497	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
ORQ91_02498	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
ORQ91_02500	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ORQ91_02501	COG5002	protein histidine kinase activity
ORQ91_02502	COG3594	Acyltransferase
ORQ91_02505	COG2323	membrane
ORQ91_02506	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
ORQ91_02507	COG0501	Belongs to the peptidase M48B family
ORQ91_02511	COG1191	sigma factor activity
ORQ91_02512	COG0861	Integral membrane protein TerC family
ORQ91_02513	COG0586	Pfam SNARE associated Golgi protein
ORQ91_02514	COG3300	MHYT domain
ORQ91_02514	COG5001	Diguanylate cyclase
ORQ91_02515	COG1846	Transcriptional regulator
ORQ91_02518	COG0789	Transcriptional regulator
ORQ91_02520	COG0583	DNA-binding transcription factor activity
ORQ91_02522	COG2239	Acts as a magnesium transporter
ORQ91_02524	COG3212	peptidase
ORQ91_02525	COG3212	peptidase
ORQ91_02526	COG3850	Histidine kinase
ORQ91_02526	COG5002	protein histidine kinase activity
ORQ91_02527	COG0745	RESPONSE REGULATOR receiver
ORQ91_02528	COG1404	Belongs to the peptidase S8 family
ORQ91_02529	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ORQ91_02530	COG0590	tRNA wobble adenosine to inosine editing
ORQ91_02531	COG1764	response to oxidative stress
ORQ91_02532	COG1846	Transcriptional regulator
ORQ91_02533	COG1764	response to oxidative stress
ORQ91_02535	COG0457	Tetratricopeptide repeat
ORQ91_02536	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
ORQ91_02537	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
ORQ91_02538	COG0788	formyltetrahydrofolate deformylase activity
ORQ91_02540	COG2076	Multidrug Resistance protein
ORQ91_02541	COG2076	Multidrug Resistance protein
ORQ91_02544	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ORQ91_02547	COG1695	Transcriptional regulator
ORQ91_02548	COG1607	acyl-coa hydrolase
ORQ91_02549	COG1834	amidinotransferase
ORQ91_02550	COG4608	Belongs to the ABC transporter superfamily
ORQ91_02551	COG0791	NLP P60 protein
ORQ91_02552	COG4948	Mandelate Racemase Muconate Lactonizing
ORQ91_02553	COG1619	proteins homologs of microcin C7 resistance protein MccF
ORQ91_02554	COG4166	transmembrane transport
ORQ91_02555	COG0444	Belongs to the ABC transporter superfamily
ORQ91_02556	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ORQ91_02557	COG0601	transmembrane transport
ORQ91_02558	COG2362	D-Aminopeptidase
ORQ91_02559	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ORQ91_02560	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ORQ91_02561	COG0346	lactoylglutathione lyase activity
ORQ91_02562	COG0531	amino acid
ORQ91_02564	COG2390	Transcriptional regulator
ORQ91_02565	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_02566	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_02567	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ORQ91_02568	COG0508	dehydrogenase complex catalyzes the overall conversion of
ORQ91_02569	COG0508	dehydrogenase complex catalyzes the overall conversion of
ORQ91_02569	COG0022	dehydrogenase e1 component
ORQ91_02570	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ORQ91_02571	COG1063	alcohol dehydrogenase
ORQ91_02574	COG3775	system Galactitol-specific IIC component
ORQ91_02576	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ORQ91_02577	COG4208	sulfate ABC transporter
ORQ91_02579	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ORQ91_02580	COG0405	Gamma-glutamyltransferase
ORQ91_02582	COG1392	Phosphate transport regulator
ORQ91_02583	COG0306	phosphate transporter
ORQ91_02587	COG3409	Peptidoglycan-binding domain 1 protein
ORQ91_02587	COG5632	N-Acetylmuramoyl-L-alanine amidase
ORQ91_02588	COG2856	Zn peptidase
ORQ91_02589	COG4195	phage-related replication protein
ORQ91_02593	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ORQ91_02594	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ORQ91_02598	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ORQ91_02604	COG0457	Tetratricopeptide repeat
ORQ91_02606	COG2807	transmembrane transport
ORQ91_02607	COG0583	DNA-binding transcription factor activity
ORQ91_02613	COG0300	oxidoreductase activity
ORQ91_02619	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ORQ91_02622	COG0825	malonyl-CoA metabolic process
ORQ91_02624	COG1733	regulation of RNA biosynthetic process
ORQ91_02626	COG0457	Tetratricopeptide repeat
ORQ91_02636	COG0626	cystathionine gamma-synthase activity
ORQ91_02637	COG0626	cystathionine gamma-synthase activity
ORQ91_02638	COG2382	esterase
ORQ91_02639	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
ORQ91_02642	COG0210	DNA helicase
ORQ91_02654	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ORQ91_02655	COG0351	phosphomethylpyrimidine kinase
ORQ91_02656	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ORQ91_02657	COG2022	thiamine diphosphate biosynthetic process
ORQ91_02658	COG2104	thiamine diphosphate biosynthetic process
ORQ91_02660	COG0352	thiamine-phosphate diphosphorylase activity
ORQ91_02661	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
ORQ91_02662	COG0475	glutathione-regulated potassium exporter activity
ORQ91_02662	COG0569	domain protein
ORQ91_02663	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
ORQ91_02664	COG0564	pseudouridine synthase activity
ORQ91_02665	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
ORQ91_02666	COG2357	RelA SpoT domain protein
ORQ91_02668	COG4116	CYTH
ORQ91_02669	COG0741	lytic transglycosylase activity
ORQ91_02672	COG2346	COG2346, Truncated hemoglobins
ORQ91_02673	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
ORQ91_02675	COG1164	Oligoendopeptidase f
ORQ91_02676	COG4469	Competence protein
ORQ91_02677	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ORQ91_02678	COG4862	establishment of competence for transformation
ORQ91_02679	COG0861	Integral membrane protein TerC family
ORQ91_02680	COG1393	Belongs to the ArsC family
ORQ91_02681	COG0456	acetyltransferase
ORQ91_02683	COG4608	Belongs to the ABC transporter superfamily
ORQ91_02684	COG0444	Belongs to the ABC transporter superfamily
ORQ91_02685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ORQ91_02686	COG0601	transmembrane transport
ORQ91_02687	COG4166	transmembrane transport
ORQ91_02688	COG0180	Tryptophanyl-tRNA synthetase
ORQ91_02690	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ORQ91_02691	COG0601	transmembrane transport
ORQ91_02693	COG4608	Belongs to the ABC transporter superfamily
ORQ91_02694	COG0444	Belongs to the ABC transporter superfamily
ORQ91_02695	COG5504	Zn-dependent protease
ORQ91_02696	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ORQ91_02697	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
ORQ91_02700	COG1744	ABC transporter substrate-binding protein PnrA-like
ORQ91_02702	COG2267	carboxylic ester hydrolase activity
ORQ91_02704	COG2814	Major facilitator Superfamily
ORQ91_02706	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ORQ91_02707	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
ORQ91_02708	COG0505	Belongs to the CarA family
ORQ91_02709	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ORQ91_02710	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ORQ91_02711	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
ORQ91_02712	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
ORQ91_02713	COG2151	metal-sulfur cluster biosynthetic enzyme
ORQ91_02714	COG1073	alpha beta
ORQ91_02715	COG0561	phosphatase activity
ORQ91_02719	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ORQ91_02720	COG1307	EDD domain protein, DegV family
ORQ91_02721	COG0840	transmembrane signaling receptor activity
ORQ91_02722	COG1744	ABC transporter substrate-binding protein PnrA-like
ORQ91_02723	COG2996	Protein conserved in bacteria
ORQ91_02724	COG1666	GTP binding
ORQ91_02725	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ORQ91_02725	COG0646	methionine synthase
ORQ91_02726	COG0646	methionine synthase
ORQ91_02726	COG1410	methionine synthase
ORQ91_02732	COG0076	glutamate decarboxylase activity
ORQ91_02738	COG1917	Cupin 2, conserved barrel domain protein
ORQ91_02738	COG2207	Transcriptional regulator
ORQ91_02739	COG0534	Mate efflux family protein
ORQ91_02740	COG1562	ergosterol biosynthetic process
ORQ91_02743	COG0367	asparagine synthase
ORQ91_02746	COG0179	Fumarylacetoacetate (FAA) hydrolase
ORQ91_02748	COG5337	Spore coat protein CotH
ORQ91_02756	COG1403	HNH endonuclease
ORQ91_02757	COG0419	ATPase involved in DNA repair
ORQ91_02758	COG0420	3'-5' exonuclease activity
ORQ91_02759	COG1074	ATP-dependent DNA helicase activity
ORQ91_02760	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
ORQ91_02761	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
ORQ91_02762	COG2259	Doxx family
ORQ91_02763	COG0501	Belongs to the peptidase M48B family
ORQ91_02765	COG3180	Ammonia monooxygenase
ORQ91_02766	COG0681	Belongs to the peptidase S26 family
ORQ91_02767	COG0398	Pfam SNARE associated Golgi protein
ORQ91_02769	COG1316	TRANSCRIPTIONal
ORQ91_02770	COG2732	(Barnase) inhibitor
ORQ91_02771	COG2814	Major facilitator Superfamily
ORQ91_02772	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ORQ91_02774	COG4903	ComK protein
ORQ91_02776	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_02777	COG0723	plastoquinol--plastocyanin reductase activity
ORQ91_02777	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ORQ91_02778	COG0840	transmembrane signaling receptor activity
ORQ91_02779	COG0406	alpha-ribazole phosphatase activity
ORQ91_02780	COG1404	Belongs to the peptidase S8 family
ORQ91_02781	COG0501	Belongs to the peptidase M48B family
ORQ91_02783	COG0318	PFAM AMP-dependent synthetase and ligase
ORQ91_02784	COG0095	Lipoate-protein ligase
ORQ91_02785	COG1234	tRNA 3'-trailer cleavage
ORQ91_02787	COG1301	dicarboxylic acid transport
ORQ91_02788	COG1363	Peptidase, m42
ORQ91_02789	COG1511	domain protein
ORQ91_02790	COG1309	transcriptional regulator
ORQ91_02791	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
ORQ91_02792	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
ORQ91_02793	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
ORQ91_02794	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ORQ91_02795	COG2329	Antibiotic biosynthesis monooxygenase
ORQ91_02796	COG1473	amidohydrolase
ORQ91_02798	COG4473	ABC transporter
ORQ91_02799	COG1131	(ABC) transporter
ORQ91_02800	COG0537	adenosine 5'-monophosphoramidase activity
ORQ91_02801	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
ORQ91_02804	COG4980	gas vesicle protein
ORQ91_02805	COG1846	Transcriptional regulator
ORQ91_02809	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ORQ91_02812	COG3481	metal-dependent phosphohydrolase, HD sub domain
ORQ91_02813	COG4717	serine-type aminopeptidase activity
ORQ91_02814	COG0420	3'-5' exonuclease activity
ORQ91_02816	COG1024	Enoyl-CoA hydratase
ORQ91_02818	COG0490	domain, Protein
ORQ91_02819	COG0475	glutathione-regulated potassium exporter activity
ORQ91_02821	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ORQ91_02822	COG0561	phosphatase activity
ORQ91_02823	COG3679	Belongs to the UPF0342 family
ORQ91_02824	COG4399	Belongs to the UPF0754 family
ORQ91_02825	COG0189	ligase activity
ORQ91_02826	COG0189	ligase activity
ORQ91_02828	COG2508	Transcriptional regulator
ORQ91_02829	COG3842	ATPase activity
ORQ91_02832	COG0702	epimerase
ORQ91_02833	COG1132	(ABC) transporter
ORQ91_02834	COG1132	(ABC) transporter
ORQ91_02835	COG0589	response to stress
ORQ91_02836	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ORQ91_02837	COG0726	polysaccharide deacetylase
ORQ91_02838	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ORQ91_02839	COG0668	transmembrane transport
ORQ91_02840	COG0584	glycerophosphoryl diester phosphodiesterase
ORQ91_02841	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ORQ91_02842	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
ORQ91_02844	COG1253	flavin adenine dinucleotide binding
ORQ91_02845	COG0789	Transcriptional regulator
ORQ91_02846	COG1253	flavin adenine dinucleotide binding
ORQ91_02847	COG0204	Acyl-transferase
ORQ91_02848	COG1595	DNA-templated transcription, initiation
ORQ91_02851	COG0531	amino acid
ORQ91_02852	COG1388	LysM domain
ORQ91_02852	COG0791	NLP P60 protein
ORQ91_02853	COG1785	Belongs to the alkaline phosphatase family
ORQ91_02854	COG2719	SpoVR family
ORQ91_02855	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ORQ91_02855	COG1017	nitric oxide dioxygenase activity
ORQ91_02856	COG1959	2 iron, 2 sulfur cluster binding
ORQ91_02857	COG0753	catalase activity
ORQ91_02860	COG2197	response regulator
ORQ91_02861	COG4585	Histidine kinase
ORQ91_02861	COG2203	Gaf domain
ORQ91_02862	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ORQ91_02863	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ORQ91_02864	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
ORQ91_02865	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ORQ91_02866	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
ORQ91_02867	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ORQ91_02868	COG3835	regulator
ORQ91_02871	COG3153	acetyltransferase
ORQ91_02871	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ORQ91_02872	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ORQ91_02874	COG0564	pseudouridine synthase activity
ORQ91_02875	COG3764	Sortase (surface protein transpeptidase)
ORQ91_02876	COG4085	toxin activity
ORQ91_02876	COG1525	nuclease
ORQ91_02876	COG0737	Belongs to the 5'-nucleotidase family
ORQ91_02877	COG5002	protein histidine kinase activity
ORQ91_02878	COG5577	PFAM Coat F domain
ORQ91_02883	COG3706	GGDEF domain
ORQ91_02884	COG1278	Cold shock
ORQ91_02886	COG0655	NAD(P)H dehydrogenase (quinone) activity
ORQ91_02887	COG2814	Major facilitator Superfamily
ORQ91_02888	COG1566	PFAM secretion protein HlyD family protein
ORQ91_02890	COG2766	serine protein kinase
ORQ91_02891	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ORQ91_02893	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ORQ91_02894	COG3382	B3 4 domain protein
ORQ91_02900	COG1131	(ABC) transporter
ORQ91_02903	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ORQ91_02904	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ORQ91_02905	COG1116	anion transmembrane transporter activity
ORQ91_02907	COG2873	o-acetylhomoserine
ORQ91_02908	COG0681	Belongs to the peptidase S26 family
ORQ91_02909	COG1368	sulfuric ester hydrolase activity
ORQ91_02940	COG0735	belongs to the Fur family
ORQ91_02941	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ORQ91_02942	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
ORQ91_02943	COG4129	membrane
ORQ91_02944	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ORQ91_02945	COG0601	transmembrane transport
ORQ91_02946	COG0747	negative chemotaxis
ORQ91_02947	COG4608	Belongs to the ABC transporter superfamily
ORQ91_02948	COG0444	Belongs to the ABC transporter superfamily
ORQ91_02949	COG1132	(ABC) transporter
ORQ91_02950	COG3557	Belongs to the UPF0374 family
ORQ91_02953	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_02955	COG1194	a g-specific adenine glycosylase
ORQ91_02956	COG1988	membrane-bound metal-dependent
ORQ91_02958	COG1191	sigma factor activity
ORQ91_02960	COG2140	Oxalate decarboxylase
ORQ91_02962	COG4485	Bacterial membrane protein, YfhO
ORQ91_02963	COG0463	Glycosyl transferase, family 2
ORQ91_02968	COG2137	regulation of response to DNA damage stimulus
ORQ91_02969	COG1090	epimerase
ORQ91_02972	COG0778	Nitroreductase
ORQ91_02976	COG0392	lysyltransferase activity
ORQ91_02976	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
ORQ91_02977	COG1846	Transcriptional regulator
ORQ91_02979	COG2318	DinB family
ORQ91_02982	COG1742	UPF0060 membrane protein
ORQ91_02983	COG0492	ferredoxin-NADP+ reductase activity
ORQ91_02984	COG2755	lipolytic protein G-D-S-L family
ORQ91_02985	COG4637	Psort location Cytoplasmic, score
ORQ91_02987	COG1309	transcriptional regulator
ORQ91_02988	COG2076	Multidrug Resistance protein
ORQ91_02989	COG2076	Multidrug Resistance protein
ORQ91_02998	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ORQ91_03000	COG2814	Major facilitator Superfamily
ORQ91_03001	COG0789	Transcriptional regulator
ORQ91_03002	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ORQ91_03003	COG1942	4-Oxalocrotonate Tautomerase
ORQ91_03004	COG0583	DNA-binding transcription factor activity
ORQ91_03006	COG2801	Transposase and inactivated derivatives
ORQ91_03009	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ORQ91_03010	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ORQ91_03012	COG0598	Magnesium transport protein CorA
ORQ91_03013	COG0726	polysaccharide deacetylase
ORQ91_03015	COG0535	radical SAM domain protein
ORQ91_03016	COG0668	transmembrane transport
ORQ91_03017	COG0217	transcriptional regulatory protein
ORQ91_03019	COG0387	Pfam Sodium calcium exchanger
ORQ91_03021	COG0477	Major facilitator Superfamily
ORQ91_03022	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ORQ91_03024	COG1295	ribonuclease BN
ORQ91_03025	COG4980	gas vesicle protein
ORQ91_03026	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ORQ91_03027	COG1115	amino acid carrier protein
ORQ91_03028	COG4840	Belongs to the UPF0435 family
ORQ91_03029	COG0693	protein deglycase activity
ORQ91_03030	COG0737	Belongs to the 5'-nucleotidase family
ORQ91_03032	COG2188	Transcriptional regulator
ORQ91_03033	COG0366	Alpha amylase catalytic
ORQ91_03034	COG1263	PTS System
ORQ91_03034	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_03036	COG0840	transmembrane signaling receptor activity
ORQ91_03037	COG0076	glutamate decarboxylase activity
ORQ91_03038	COG1368	sulfuric ester hydrolase activity
ORQ91_03040	COG2801	Transposase and inactivated derivatives
ORQ91_03043	COG3739	integral membrane protein
ORQ91_03044	COG1263	PTS System
ORQ91_03044	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_03045	COG0024	Methionine aminopeptidase
ORQ91_03048	COG2258	MOSC domain
ORQ91_03049	COG1254	Belongs to the acylphosphatase family
ORQ91_03050	COG0583	DNA-binding transcription factor activity
ORQ91_03051	COG0477	Major facilitator Superfamily
ORQ91_03052	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
ORQ91_03053	COG1695	Transcriptional regulator
ORQ91_03054	COG3479	Phenolic acid decarboxylase
ORQ91_03056	COG2851	Citrate transporter
ORQ91_03057	COG3181	Tripartite tricarboxylate transporter family receptor
ORQ91_03058	COG4565	transcriptional regulatory protein
ORQ91_03059	COG3290	protein histidine kinase activity
ORQ91_03061	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ORQ91_03061	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ORQ91_03063	COG1262	PFAM Formylglycine-generating sulfatase enzyme
ORQ91_03064	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ORQ91_03064	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
ORQ91_03068	COG2130	NADP-dependent
ORQ91_03069	COG0513	Belongs to the DEAD box helicase family
ORQ91_03070	COG0488	(ABC) transporter
ORQ91_03071	COG2814	Major facilitator Superfamily
ORQ91_03072	COG0789	Transcriptional regulator
ORQ91_03073	COG1469	GTP cyclohydrolase I activity
ORQ91_03074	COG0488	(ABC) transporter
ORQ91_03075	COG0463	Glycosyl transferase, family 2
ORQ91_03076	COG0531	amino acid
ORQ91_03079	COG0071	Belongs to the small heat shock protein (HSP20) family
ORQ91_03082	COG0471	metal ion transport
ORQ91_03084	COG2223	nitrite transmembrane transporter activity
ORQ91_03085	COG1442	glycosyl transferase family 8
ORQ91_03086	COG1216	Glycosyl transferase, family 2
ORQ91_03087	COG1442	glycosyl transferase family 8
ORQ91_03088	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ORQ91_03089	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
ORQ91_03094	COG2211	Major facilitator Superfamily
ORQ91_03096	COG1486	melibiose metabolic process
ORQ91_03099	COG0492	ferredoxin-NADP+ reductase activity
ORQ91_03100	COG1959	2 iron, 2 sulfur cluster binding
ORQ91_03102	COG1486	melibiose metabolic process
ORQ91_03103	COG1263	PTS System
ORQ91_03103	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_03104	COG1737	Transcriptional regulator
ORQ91_03106	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ORQ91_03107	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
ORQ91_03108	COG1597	lipid kinase activity
ORQ91_03109	COG1957	nucleoside hydrolase
ORQ91_03110	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ORQ91_03111	COG1309	transcriptional regulator
ORQ91_03112	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ORQ91_03113	COG0154	amidase activity
ORQ91_03114	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
ORQ91_03115	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ORQ91_03116	COG1285	pathogenesis
ORQ91_03117	COG1785	Belongs to the alkaline phosphatase family
ORQ91_03118	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
ORQ91_03124	COG1960	acyl-CoA dehydrogenase activity
ORQ91_03127	COG1250	3-hydroxyacyl-CoA dehydrogenase
ORQ91_03130	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ORQ91_03133	COG4851	CamS sex pheromone cAM373 precursor
ORQ91_03134	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
ORQ91_03135	COG0210	DNA helicase
ORQ91_03136	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
ORQ91_03141	COG0069	glutamate synthase activity
ORQ91_03142	COG4496	protein, YerC YecD
ORQ91_03143	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
ORQ91_03145	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ORQ91_03146	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ORQ91_03147	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ORQ91_03148	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
ORQ91_03152	COG0151	Belongs to the GarS family
ORQ91_03153	COG0138	bifunctional purine biosynthesis protein purh
ORQ91_03154	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ORQ91_03155	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
ORQ91_03156	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ORQ91_03157	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ORQ91_03158	COG0047	phosphoribosylformylglycinamidine synthase activity
ORQ91_03159	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
ORQ91_03160	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
ORQ91_03161	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ORQ91_03162	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ORQ91_03163	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ORQ91_03165	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
ORQ91_03166	COG3064	Membrane
ORQ91_03169	COG2252	PERMEase
ORQ91_03170	COG0583	DNA-binding transcription factor activity
ORQ91_03171	COG2814	Major facilitator Superfamily
ORQ91_03173	COG1595	DNA-templated transcription, initiation
ORQ91_03177	COG1404	Belongs to the peptidase S8 family
ORQ91_03181	COG2207	Transcriptional regulator
ORQ91_03183	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
ORQ91_03185	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ORQ91_03186	COG0518	GMP synthase (glutamine-hydrolyzing) activity
ORQ91_03186	COG0519	Catalyzes the synthesis of GMP from XMP
ORQ91_03187	COG1305	Transglutaminase-like
ORQ91_03188	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
ORQ91_03189	COG0714	Associated with various cellular activities
ORQ91_03190	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
ORQ91_03191	COG1113	amino acid transport
ORQ91_03192	COG2132	Multicopper oxidase
ORQ91_03194	COG0823	Involved in the tonB-independent uptake of proteins
ORQ91_03195	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ORQ91_03201	COG2808	Putative FMN-binding domain
ORQ91_03202	COG0456	acetyltransferase
ORQ91_03203	COG1846	Transcriptional regulator
ORQ91_03204	COG0459	protein refolding
ORQ91_03205	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
ORQ91_03206	COG1266	CAAX protease self-immunity
ORQ91_03209	COG0805	protein transport
ORQ91_03210	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ORQ91_03211	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
ORQ91_03212	COG0315	cyclic pyranopterin monophosphate synthase activity
ORQ91_03213	COG0488	(ABC) transporter
ORQ91_03214	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
ORQ91_03215	COG0456	acetyltransferase
ORQ91_03216	COG1214	PFAM Peptidase M22, glycoprotease
ORQ91_03217	COG0802	atpase or kinase
ORQ91_03218	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ORQ91_03226	COG1301	dicarboxylic acid transport
ORQ91_03228	COG0697	spore germination
ORQ91_03229	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ORQ91_03231	COG4122	O-methyltransferase activity
ORQ91_03235	COG1396	sequence-specific DNA binding
ORQ91_03238	COG0778	Nitroreductase
ORQ91_03239	COG1846	Transcriptional regulator
ORQ91_03240	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
ORQ91_03241	COG1309	transcriptional regulator
ORQ91_03247	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ORQ91_03248	COG2814	Major facilitator Superfamily
ORQ91_03252	COG0252	asparaginase activity
ORQ91_03255	COG4221	oxidoreductase activity
ORQ91_03256	COG0657	acetylesterase activity
ORQ91_03257	COG0477	Major facilitator Superfamily
ORQ91_03261	COG0789	Transcriptional regulator
ORQ91_03262	COG1064	alcohol dehydrogenase
ORQ91_03264	COG1404	Belongs to the peptidase S8 family
ORQ91_03265	COG1278	Cold shock
ORQ91_03266	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
ORQ91_03266	COG0456	acetyltransferase
ORQ91_03267	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ORQ91_03268	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ORQ91_03276	COG3284	Transcriptional regulator
ORQ91_03277	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ORQ91_03278	COG0508	dehydrogenase complex catalyzes the overall conversion of
ORQ91_03279	COG0022	dehydrogenase e1 component
ORQ91_03280	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
ORQ91_03281	COG3091	SprT-like family
ORQ91_03282	COG2183	response to ionizing radiation
ORQ91_03283	COG2208	phosphoserine phosphatase activity
ORQ91_03284	COG1191	sigma factor activity
ORQ91_03285	COG2172	sigma factor antagonist activity
ORQ91_03286	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_03287	COG2208	phosphoserine phosphatase activity
ORQ91_03288	COG2172	sigma factor antagonist activity
ORQ91_03289	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_03290	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_03291	COG2337	Toxic component of a toxin-antitoxin (TA) module
ORQ91_03292	COG0864	Transcriptional regulator
ORQ91_03293	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ORQ91_03294	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
ORQ91_03295	COG0736	holo-[acyl-carrier-protein] synthase activity
ORQ91_03296	COG0705	Rhomboid family
ORQ91_03297	COG3428	Bacterial PH domain
ORQ91_03298	COG3402	PFAM membrane-flanked domain
ORQ91_03299	COG0513	Belongs to the DEAD box helicase family
ORQ91_03302	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ORQ91_03303	COG1181	Belongs to the D-alanine--D-alanine ligase family
ORQ91_03304	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ORQ91_03307	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
ORQ91_03308	COG1131	(ABC) transporter
ORQ91_03309	COG1301	dicarboxylic acid transport
ORQ91_03310	COG0628	permease
ORQ91_03311	COG1301	dicarboxylic acid transport
ORQ91_03312	COG4565	transcriptional regulatory protein
ORQ91_03313	COG3290	protein histidine kinase activity
ORQ91_03314	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ORQ91_03315	COG2217	Heavy metal translocating P-type atpase
ORQ91_03316	COG2261	transglycosylase associated protein
ORQ91_03317	COG1914	H( )-stimulated, divalent metal cation uptake system
ORQ91_03318	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ORQ91_03323	COG5444	nuclease activity
ORQ91_03324	COG0028	Belongs to the TPP enzyme family
ORQ91_03325	COG0531	amino acid
ORQ91_03327	COG1215	transferase activity, transferring glycosyl groups
ORQ91_03328	COG5298	Protein conserved in bacteria
ORQ91_03329	COG3706	GGDEF domain
ORQ91_03330	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
ORQ91_03331	COG0551	DNA topoisomerase type I activity
ORQ91_03331	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ORQ91_03332	COG0473	3-isopropylmalate dehydrogenase activity
ORQ91_03333	COG0697	spore germination
ORQ91_03334	COG1917	Cupin 2, conserved barrel domain protein
ORQ91_03334	COG2207	Transcriptional regulator
ORQ91_03335	COG1802	Transcriptional regulator
ORQ91_03336	COG2814	Major facilitator Superfamily
ORQ91_03341	COG3871	stress protein (general stress protein 26)
ORQ91_03343	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_03344	COG2226	methyltransferase
ORQ91_03345	COG3711	transcriptional antiterminator
ORQ91_03347	COG2755	lipolytic protein G-D-S-L family
ORQ91_03348	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
ORQ91_03349	COG1414	Transcriptional regulator
ORQ91_03350	COG1984	allophanate hydrolase subunit 2
ORQ91_03351	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ORQ91_03352	COG4336	lyase activity
ORQ91_03353	COG1914	H( )-stimulated, divalent metal cation uptake system
ORQ91_03354	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
ORQ91_03355	COG0561	phosphatase activity
ORQ91_03357	COG0346	lactoylglutathione lyase activity
ORQ91_03361	COG4221	oxidoreductase activity
ORQ91_03363	COG0840	transmembrane signaling receptor activity
ORQ91_03364	COG0246	Mannitol dehydrogenase
ORQ91_03365	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_03366	COG2213	PTS system mannitol-specific
ORQ91_03367	COG1276	copper resistance
ORQ91_03367	COG2372	response to copper ion
ORQ91_03368	COG4549	nuclear export factor GLE1
ORQ91_03369	COG2249	NAD(P)H dehydrogenase (quinone) activity
ORQ91_03370	COG1012	belongs to the aldehyde dehydrogenase family
ORQ91_03371	COG0531	amino acid
ORQ91_03372	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ORQ91_03373	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ORQ91_03374	COG0640	Transcriptional regulator
ORQ91_03376	COG1309	transcriptional regulator
ORQ91_03377	COG2814	Major facilitator Superfamily
ORQ91_03378	COG0527	aspartate kinase activity
ORQ91_03379	COG1366	Belongs to the anti-sigma-factor antagonist family
ORQ91_03380	COG3850	Histidine kinase
ORQ91_03380	COG5002	protein histidine kinase activity
ORQ91_03381	COG0745	RESPONSE REGULATOR receiver
ORQ91_03382	COG2079	MmgE PrpD family protein
ORQ91_03383	COG1473	amidohydrolase
ORQ91_03384	COG1126	abc transporter atp-binding protein
ORQ91_03385	COG0765	amino acid transport
ORQ91_03386	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_03387	COG0456	acetyltransferase
ORQ91_03388	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ORQ91_03389	COG5434	Belongs to the glycosyl hydrolase 28 family
ORQ91_03390	COG3104	oligopeptide transport
ORQ91_03391	COG1904	glucuronate isomerase
ORQ91_03393	COG0673	inositol 2-dehydrogenase activity
ORQ91_03394	COG1802	Transcriptional regulator
ORQ91_03395	COG1312	Catalyzes the dehydration of D-mannonate
ORQ91_03396	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_03398	COG0833	amino acid
ORQ91_03399	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_03400	COG0765	amino acid transport
ORQ91_03401	COG1126	abc transporter atp-binding protein
ORQ91_03402	COG2364	Membrane
ORQ91_03405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ORQ91_03406	COG0697	spore germination
ORQ91_03409	COG4555	ABC transporter
ORQ91_03412	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
ORQ91_03415	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ORQ91_03416	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ORQ91_03417	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ORQ91_03420	COG3842	ATPase activity
ORQ91_03424	COG3209	COG3209 Rhs family protein
ORQ91_03425	COG3290	protein histidine kinase activity
ORQ91_03425	COG0840	transmembrane signaling receptor activity
ORQ91_03427	COG2746	aminoglycoside 3-N-acetyltransferase activity
ORQ91_03428	COG1522	sequence-specific DNA binding
ORQ91_03429	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ORQ91_03431	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ORQ91_03432	COG0765	amino acid transport
ORQ91_03433	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ORQ91_03434	COG2508	Transcriptional regulator
ORQ91_03435	COG1012	belongs to the aldehyde dehydrogenase family
ORQ91_03436	COG0506	proline dehydrogenase activity
ORQ91_03437	COG3541	Predicted nucleotidyltransferase
ORQ91_03439	COG3458	cephalosporin-C deacetylase activity
ORQ91_03440	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ORQ91_03441	COG0583	DNA-binding transcription factor activity
ORQ91_03442	COG2226	methyltransferase
ORQ91_03443	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
ORQ91_03446	COG2271	Major facilitator Superfamily
ORQ91_03447	COG1804	L-carnitine dehydratase bile acid-inducible protein F
ORQ91_03449	COG0028	Belongs to the TPP enzyme family
ORQ91_03450	COG0710	3-dehydroquinate dehydratase activity
ORQ91_03451	COG1012	belongs to the aldehyde dehydrogenase family
ORQ91_03453	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
ORQ91_03454	COG3665	Urea carboxylase-associated protein
ORQ91_03455	COG1113	amino acid transport
ORQ91_03456	COG3403	YqcI/YcgG family
ORQ91_03458	COG1280	lysine exporter protein (LysE YggA)
ORQ91_03459	COG0738	Major facilitator superfamily
ORQ91_03460	COG0673	inositol 2-dehydrogenase activity
ORQ91_03461	COG0561	phosphatase activity
ORQ91_03462	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ORQ91_03463	COG1609	Transcriptional regulator
ORQ91_03464	COG1620	l-lactate permease
ORQ91_03465	COG0039	L-malate dehydrogenase activity
ORQ91_03466	COG1288	antiporter activity
ORQ91_03467	COG1473	amidohydrolase
ORQ91_03469	COG0596	Alpha beta hydrolase
ORQ91_03470	COG2113	Glycine betaine
ORQ91_03471	COG4176	ABC-type proline glycine betaine transport system permease component
ORQ91_03472	COG0517	IMP dehydrogenase activity
ORQ91_03472	COG4175	Glycine betaine
ORQ91_03473	COG3853	Toxic anion resistance protein (TelA)
ORQ91_03479	COG0861	Integral membrane protein TerC family
ORQ91_03480	COG2310	stress, protein
ORQ91_03481	COG2310	stress, protein
ORQ91_03482	COG2310	stress, protein
ORQ91_03483	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ORQ91_03485	COG1028	Short-chain dehydrogenase reductase Sdr
ORQ91_03486	COG3773	Cell wall hydrolase
ORQ91_03489	COG1668	transmembrane transport
ORQ91_03490	COG4555	ABC transporter
ORQ91_03491	COG3279	Response regulator of the LytR AlgR family
ORQ91_03492	COG3290	protein histidine kinase activity
ORQ91_03493	COG0667	Aldo Keto reductase
ORQ91_03495	COG4585	Histidine kinase
ORQ91_03496	COG2197	response regulator
ORQ91_03498	COG3012	SEC-C Motif Domain Protein
ORQ91_03498	COG1405	negative regulation of cell septum assembly
ORQ91_03499	COG0784	Response regulator, receiver
ORQ91_03500	COG4191	Histidine kinase
ORQ91_03501	COG2066	Belongs to the glutaminase family
ORQ91_03502	COG1115	amino acid carrier protein
ORQ91_03503	COG0596	Alpha beta hydrolase
ORQ91_03505	COG0531	amino acid
ORQ91_03506	COG0318	PFAM AMP-dependent synthetase and ligase
ORQ91_03507	COG1846	Transcriptional regulator
ORQ91_03508	COG1063	alcohol dehydrogenase
ORQ91_03509	COG1917	Cupin 2, conserved barrel domain protein
ORQ91_03510	COG1309	transcriptional regulator
ORQ91_03512	COG1404	Belongs to the peptidase S8 family
ORQ91_03515	COG0456	acetyltransferase
ORQ91_03516	COG2814	Major facilitator Superfamily
ORQ91_03519	COG1695	Transcriptional regulator
ORQ91_03520	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
ORQ91_03521	COG2040	homocysteine
ORQ91_03522	COG0833	amino acid
ORQ91_03524	COG1404	Belongs to the peptidase S8 family
ORQ91_03526	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_03527	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ORQ91_03528	COG0383	alpha-mannosidase activity
ORQ91_03529	COG1940	carbohydrate kinase activity
ORQ91_03530	COG3711	transcriptional antiterminator
ORQ91_03530	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ORQ91_03533	COG2723	6-phospho-beta-galactosidase activity
ORQ91_03534	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_03534	COG1263	PTS System
ORQ91_03534	COG2190	(PTS) system
ORQ91_03535	COG3711	transcriptional antiterminator
ORQ91_03537	COG0531	amino acid
ORQ91_03538	COG1054	Belongs to the UPF0176 family
ORQ91_03539	COG0371	Dehydrogenase
ORQ91_03540	COG0656	L-ascorbic acid biosynthetic process
ORQ91_03542	COG1683	Conserved Protein
ORQ91_03544	COG1846	Transcriptional regulator
ORQ91_03546	COG2814	Major facilitator Superfamily
ORQ91_03547	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
ORQ91_03549	COG0730	response to heat
ORQ91_03550	COG0425	Belongs to the sulfur carrier protein TusA family
ORQ91_03551	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ORQ91_03551	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ORQ91_03552	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ORQ91_03552	COG0425	Belongs to the sulfur carrier protein TusA family
ORQ91_03554	COG2210	Belongs to the sulfur carrier protein TusA family
ORQ91_03555	COG1937	Protein conserved in bacteria
ORQ91_03558	COG1331	Highly conserved protein containing a thioredoxin domain
ORQ91_03561	COG0300	oxidoreductase activity
ORQ91_03562	COG1902	pentaerythritol trinitrate reductase activity
ORQ91_03563	COG0508	dehydrogenase complex catalyzes the overall conversion of
ORQ91_03563	COG0596	Alpha beta hydrolase
ORQ91_03564	COG1309	transcriptional regulator
ORQ91_03567	COG0741	lytic transglycosylase activity
ORQ91_03567	COG0791	NLP P60 protein
ORQ91_03568	COG5644	endopeptidase inhibitor activity
ORQ91_03569	COG0433	COG0433 Predicted ATPase
ORQ91_03590	COG2946	Replication initiation factor
ORQ91_03591	COG1674	ftsk spoiiie
ORQ91_03597	COG1396	sequence-specific DNA binding
ORQ91_03598	COG2856	Zn peptidase
ORQ91_03600	COG0457	Tetratricopeptide repeat
ORQ91_03601	COG1331	Highly conserved protein containing a thioredoxin domain
ORQ91_03602	COG1331	Highly conserved protein containing a thioredoxin domain
ORQ91_03604	COG2271	Major facilitator Superfamily
ORQ91_03605	COG0584	glycerophosphoryl diester phosphodiesterase
ORQ91_03606	COG1113	amino acid transport
ORQ91_03611	COG2814	Major facilitator Superfamily
ORQ91_03612	COG2311	Membrane
ORQ91_03614	COG1413	lyase activity
ORQ91_03616	COG1131	(ABC) transporter
ORQ91_03618	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ORQ91_03619	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ORQ91_03620	COG4856	YbbR-like protein
ORQ91_03621	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
ORQ91_03622	COG5662	AntiSigma factor
ORQ91_03623	COG1595	DNA-templated transcription, initiation
ORQ91_03630	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
ORQ91_03631	COG1737	Transcriptional regulator
ORQ91_03632	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ORQ91_03632	COG1263	PTS System
ORQ91_03633	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ORQ91_03634	COG1472	Belongs to the glycosyl hydrolase 3 family
ORQ91_03635	COG3876	Protein conserved in bacteria
ORQ91_03636	COG0385	Bile acid
ORQ91_03637	COG0659	secondary active sulfate transmembrane transporter activity
ORQ91_03643	COG0726	polysaccharide deacetylase
ORQ91_03644	COG2194	sulfuric ester hydrolase activity
ORQ91_03646	COG0489	protein tyrosine kinase activity
ORQ91_03647	COG0860	N-Acetylmuramoyl-L-alanine amidase
ORQ91_03653	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ORQ91_03655	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ORQ91_03656	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
ORQ91_03657	COG0101	tRNA pseudouridine synthase activity
ORQ91_03658	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
ORQ91_03659	COG1122	ATPase activity
ORQ91_03660	COG1122	ATPase activity
ORQ91_03661	COG0203	ribosomal protein L17
ORQ91_03662	COG0202	RNA polymerase activity
ORQ91_03663	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
ORQ91_03664	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
ORQ91_03665	COG0257	Belongs to the bacterial ribosomal protein bL36 family
ORQ91_03666	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
ORQ91_03667	COG0024	Methionine aminopeptidase
ORQ91_03668	COG0563	adenylate kinase activity
ORQ91_03669	COG0201	protein transport
ORQ91_03670	COG0200	Binds to the 23S rRNA
ORQ91_03671	COG1841	ribosomal large subunit assembly
ORQ91_03672	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
ORQ91_03673	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
ORQ91_03674	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
ORQ91_03675	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
ORQ91_03676	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
ORQ91_03677	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
ORQ91_03678	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
ORQ91_03679	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
ORQ91_03680	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
ORQ91_03681	COG0255	Belongs to the universal ribosomal protein uL29 family
ORQ91_03683	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
ORQ91_03684	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
ORQ91_03685	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
ORQ91_03686	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
ORQ91_03687	COG0089	rRNA binding
ORQ91_03688	COG0088	Forms part of the polypeptide exit tunnel
ORQ91_03689	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
ORQ91_03691	COG0596	Alpha beta hydrolase
ORQ91_03692	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
ORQ91_03693	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
ORQ91_03694	COG0049	tRNA binding
ORQ91_03695	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
ORQ91_03696	COG1358	cellular component organization or biogenesis
ORQ91_03697	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
ORQ91_03698	COG0085	RNA polymerase activity
ORQ91_03699	COG2813	Specifically methylates the guanine in position
ORQ91_03700	COG0222	ribosome binding
ORQ91_03701	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
ORQ91_03702	COG0081	regulation of translation
ORQ91_03704	COG0250	Participates in transcription elongation, termination and antitermination
ORQ91_03705	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ORQ91_03706	COG1595	DNA-templated transcription, initiation
ORQ91_03707	COG3688	RNA-binding protein containing a PIN domain
ORQ91_03708	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ORQ91_03709	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
ORQ91_03710	COG0215	cysteine-tRNA ligase activity
ORQ91_03711	COG1045	serine acetyltransferase
ORQ91_03712	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
ORQ91_03713	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
ORQ91_03714	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
ORQ91_03715	COG4956	integral membrane protein (PIN domain superfamily)
ORQ91_03716	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
ORQ91_03717	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
ORQ91_03718	COG0542	response to heat
ORQ91_03719	COG3869	Catalyzes the specific phosphorylation of arginine residues in
ORQ91_03720	COG3880	PFAM UvrB UvrC protein
ORQ91_03721	COG4463	regulation of RNA biosynthetic process
ORQ91_03737	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
ORQ91_03738	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ORQ91_03739	COG1396	sequence-specific DNA binding
ORQ91_03740	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ORQ91_03741	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ORQ91_03742	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ORQ91_03743	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ORQ91_03744	COG0512	Glutamine amidotransferase of anthranilate synthase
ORQ91_03745	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ORQ91_03746	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
ORQ91_03747	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ORQ91_03748	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
ORQ91_03749	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
ORQ91_03750	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ORQ91_03751	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ORQ91_03752	COG0037	tRNA processing
ORQ91_03753	COG0515	serine threonine protein kinase
ORQ91_03754	COG2304	oxidoreductase activity
ORQ91_03755	COG2208	phosphoserine phosphatase activity
ORQ91_03758	COG1098	S1 RNA binding domain
ORQ91_03759	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
ORQ91_03762	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ORQ91_03763	COG3956	TIGRFAM MazG family protein
ORQ91_03764	COG2244	polysaccharide biosynthetic process
ORQ91_03765	COG2002	toxin-antitoxin pair type II binding
ORQ91_03766	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ORQ91_03768	COG0193	aminoacyl-tRNA hydrolase activity
ORQ91_03769	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
ORQ91_03770	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
ORQ91_03772	COG2088	sporulation resulting in formation of a cellular spore
ORQ91_03773	COG0251	oxidation-reduction process
ORQ91_03774	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ORQ91_03775	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
ORQ91_03777	COG4466	Protein conserved in bacteria
ORQ91_03779	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
ORQ91_03780	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
ORQ91_03781	COG3583	domain protein
ORQ91_03781	COG3584	3D domain protein
ORQ91_03782	COG0084	hydrolase, TatD family'
ORQ91_03783	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ORQ91_03783	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ORQ91_03784	COG2002	toxin-antitoxin pair type II binding
ORQ91_03785	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ORQ91_03786	COG2827	Endonuclease containing a URI domain
ORQ91_03787	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
ORQ91_03788	COG4467	Involved in initiation control of chromosome replication
ORQ91_03789	COG1774	PSP1 C-terminal conserved region
ORQ91_03790	COG0470	DNA polymerase III
ORQ91_03791	COG1728	Protein conserved in bacteria
ORQ91_03792	COG3870	Protein conserved in bacteria
ORQ91_03793	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
ORQ91_03794	COG1982	Orn Lys Arg decarboxylase major
ORQ91_03795	COG3853	Toxic anion resistance protein (TelA)
ORQ91_03796	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
ORQ91_03805	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
ORQ91_03806	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
ORQ91_03807	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
ORQ91_03808	COG0590	tRNA wobble adenosine to inosine editing
ORQ91_03809	COG1335	isochorismatase
ORQ91_03810	COG1388	LysM domain
ORQ91_03810	COG3858	chitin binding
ORQ91_03811	COG1428	Deoxynucleoside kinase
ORQ91_03812	COG1428	Deoxynucleoside kinase
ORQ91_03814	COG0840	transmembrane signaling receptor activity
ORQ91_03815	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
ORQ91_03816	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
ORQ91_03817	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
ORQ91_03818	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ORQ91_03819	COG2801	Transposase and inactivated derivatives
ORQ91_03821	COG1686	Belongs to the peptidase S11 family
ORQ91_03822	COG0517	IMP dehydrogenase activity
ORQ91_03822	COG0516	GMP reductase activity
ORQ91_03829	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
ORQ91_03830	COG0187	DNA topoisomerase II activity
ORQ91_03832	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ORQ91_03833	COG2501	S4 domain
ORQ91_03834	COG0592	DNA-directed DNA polymerase activity