locus-tag class description UP17_00005 PF00308 Bacterial dnaA protein UP17_00005 PF08299 Bacterial dnaA protein helix-turn-helix UP17_00005 PF11638 DnaA N-terminal domain UP17_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain UP17_00010 PF02767 DNA polymerase III beta subunit, central domain UP17_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain UP17_00020 PF02463 RecF/RecN/SMC N terminal domain UP17_00025 PF04025 Domain of unknown function (DUF370) UP17_00030 PF00986 DNA gyrase B subunit, carboxyl terminus UP17_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_00030 PF01751 Toprim domain UP17_00030 PF00204 DNA gyrase B UP17_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A UP17_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller UP17_00065 PF14175 YaaC-like Protein UP17_00070 PF00571 CBS domain UP17_00070 PF00478 IMP dehydrogenase / GMP reductase domain UP17_00075 PF07943 Penicillin-binding protein 5, C-terminal domain UP17_00075 PF00768 D-alanyl-D-alanine carboxypeptidase UP17_00080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP17_00080 PF02403 Seryl-tRNA synthetase N-terminal domain UP17_00090 PF01712 Deoxynucleoside kinase UP17_00120 PF12169 DNA polymerase III subunits gamma and tau domain III UP17_00130 PF02132 RecR protein UP17_00130 PF13662 Toprim domain UP17_00135 PF10704 Protein of unknown function (DUF2508) UP17_00140 PF07441 SigmaK-factor processing regulatory protein BofA UP17_00170 PF10764 Inhibitor of sigma-G Gin UP17_00175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UP17_00175 PF01276 Orn/Lys/Arg decarboxylase, major domain UP17_00180 PF02223 Thymidylate kinase UP17_00185 PF06153 Cyclic-di-AMP receptor UP17_00190 PF03885 Protein of unknown function (DUF327) UP17_00195 PF09115 DNA polymerase III, delta subunit, C terminal UP17_00200 PF04468 PSP1 C-terminal conserved region UP17_00205 PF06156 Initiation control protein YabA UP17_00210 PF05175 Methyltransferase small domain UP17_00215 PF01541 GIY-YIG catalytic domain UP17_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP17_00225 PF18277 AbrB C-terminal domain UP17_00230 PF09334 tRNA synthetases class I (M) UP17_00230 PF01588 Putative tRNA binding domain UP17_00230 PF08264 Anticodon-binding domain of tRNA UP17_00235 PF01026 TatD related DNase UP17_00240 PF07501 G5 domain UP17_00240 PF06725 3D domain UP17_00240 PF03990 G5-linked-Ubiquitin-like domain UP17_00245 PF13662 Toprim domain UP17_00245 PF13331 Domain of unknown function (DUF4093) UP17_00250 PF00398 Ribosomal RNA adenine dimethylase UP17_00255 PF05582 YabG peptidase U57 UP17_00260 PF06257 Biofilm formation stimulator VEG UP17_00265 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP17_00270 PF08544 GHMP kinases C terminal UP17_00270 PF00288 GHMP kinases N terminal domain UP17_00275 PF09182 Bacterial purine repressor, N-terminal UP17_00275 PF00156 Phosphoribosyl transferase domain UP17_00280 PF01042 Endoribonuclease L-PSP UP17_00285 PF04026 SpoVG UP17_00290 PF00132 Bacterial transferase hexapeptide (six repeats) UP17_00290 PF00483 Nucleotidyl transferase UP17_00295 PF14572 Phosphoribosyl synthetase-associated domain UP17_00295 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase UP17_00305 PF14693 Ribosomal protein TL5, C-terminal domain UP17_00305 PF01386 Ribosomal L25p family UP17_00310 PF01195 Peptidyl-tRNA hydrolase UP17_00315 PF10955 Protein of unknown function (DUF2757) UP17_00320 PF02559 CarD-like/TRCF domain UP17_00320 PF17757 UvrB interaction domain UP17_00320 PF03461 TRCF domain UP17_00320 PF00271 Helicase conserved C-terminal domain UP17_00320 PF00270 DEAD/DEAH box helicase UP17_00325 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP17_00325 PF15714 Stage V sporulation protein T C-terminal, transcription factor UP17_00330 PF01943 Polysaccharide biosynthesis protein UP17_00330 PF14667 Polysaccharide biosynthesis C-terminal domain UP17_00335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_00335 PF03819 MazG nucleotide pyrophosphohydrolase domain UP17_00340 PF01479 S4 domain UP17_00345 PF07873 YabP family UP17_00350 PF09578 Spore cortex protein YabQ (Spore_YabQ) UP17_00360 PF00575 S1 RNA binding domain UP17_00375 PF07228 Stage II sporulation protein E (SpoIIE) UP17_00380 PF00092 von Willebrand factor type A domain UP17_00385 PF00069 Protein kinase domain UP17_00390 PF09179 TilS substrate binding domain UP17_00390 PF11734 TilS substrate C-terminal domain UP17_00390 PF01171 PP-loop family UP17_00405 PF03309 Type III pantothenate kinase UP17_00410 PF01430 Hsp33 protein UP17_00415 PF13145 PPIC-type PPIASE domain UP17_00420 PF00291 Pyridoxal-phosphate dependent enzyme UP17_00425 PF00809 Pterin binding enzyme UP17_00430 PF02152 Dihydroneopterin aldolase UP17_00435 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) UP17_00440 PF01381 Helix-turn-helix UP17_00445 PF01207 Dihydrouridine synthase (Dus) UP17_00450 PF01336 OB-fold nucleic acid binding domain UP17_00450 PF00152 tRNA synthetases class II (D, K and N) UP17_00530 PF05848 CtsR N-terminal HTH domain UP17_00530 PF17727 CtsR C-terminal dimerization domain UP17_00535 PF02151 UvrB/uvrC motif UP17_00540 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain UP17_00545 PF10431 C-terminal, D2-small domain, of ClpB protein UP17_00545 PF02861 Clp amino terminal domain, pathogenicity island component UP17_00545 PF17871 AAA lid domain UP17_00545 PF07724 AAA domain (Cdc48 subfamily) UP17_00545 PF00004 ATPase family associated with various cellular activities (AAA) UP17_00550 PF18073 Rubredoxin metal binding domain UP17_00555 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP17_00555 PF10635 DisA bacterial checkpoint controller linker region UP17_00565 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase UP17_00570 PF02542 YgbB family UP17_00575 PF00749 tRNA synthetases class I (E and Q), catalytic domain UP17_00585 PF06426 Serine acetyltransferase, N-terminal UP17_00585 PF00132 Bacterial transferase hexapeptide (six repeats) UP17_00590 PF09190 DALR domain UP17_00590 PF01406 tRNA synthetases class I (C) catalytic domain UP17_00595 PF00636 Ribonuclease III domain UP17_00600 PF08032 RNA 2'-O ribose methyltransferase substrate binding UP17_00600 PF00588 SpoU rRNA Methylase family UP17_00605 PF05991 YacP-like NYN domain UP17_00610 PF08281 Sigma-70, region 4 UP17_00610 PF04542 Sigma-70 region 2 UP17_00615 PF00584 SecE/Sec61-gamma subunits of protein translocation complex UP17_00620 PF02357 Transcription termination factor nusG UP17_00620 PF00467 KOW motif UP17_00625 PF03946 Ribosomal protein L11, N-terminal domain UP17_00625 PF00298 Ribosomal protein L11, RNA binding domain UP17_00630 PF00687 Ribosomal protein L1p/L10e family UP17_00635 PF00466 Ribosomal protein L10 UP17_00645 PF05175 Methyltransferase small domain UP17_00650 PF04560 RNA polymerase Rpb2, domain 7 UP17_00650 PF00562 RNA polymerase Rpb2, domain 6 UP17_00650 PF10385 RNA polymerase beta subunit external 1 domain UP17_00650 PF04565 RNA polymerase Rpb2, domain 3 UP17_00650 PF04563 RNA polymerase beta subunit UP17_00650 PF04561 RNA polymerase Rpb2, domain 2 UP17_00655 PF04998 RNA polymerase Rpb1, domain 5 UP17_00655 PF04997 RNA polymerase Rpb1, domain 1 UP17_00655 PF00623 RNA polymerase Rpb1, domain 2 UP17_00655 PF04983 RNA polymerase Rpb1, domain 3 UP17_00655 PF05000 RNA polymerase Rpb1, domain 4 UP17_00660 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family UP17_00665 PF00164 Ribosomal protein S12/S23 UP17_00670 PF00177 Ribosomal protein S7p/S5e UP17_00675 PF00679 Elongation factor G C-terminus UP17_00675 PF14492 Elongation Factor G, domain II UP17_00675 PF03764 Elongation factor G, domain IV UP17_00675 PF00009 Elongation factor Tu GTP binding domain UP17_00675 PF03144 Elongation factor Tu domain 2 UP17_00680 PF03143 Elongation factor Tu C-terminal domain UP17_00680 PF03144 Elongation factor Tu domain 2 UP17_00680 PF00009 Elongation factor Tu GTP binding domain UP17_00685 PF00338 Ribosomal protein S10p/S20e UP17_00690 PF00297 Ribosomal protein L3 UP17_00695 PF00573 Ribosomal protein L4/L1 family UP17_00700 PF00276 Ribosomal protein L23 UP17_00705 PF03947 Ribosomal Proteins L2, C-terminal domain UP17_00705 PF00181 Ribosomal Proteins L2, RNA binding domain UP17_00710 PF00203 Ribosomal protein S19 UP17_00715 PF00237 Ribosomal protein L22p/L17e UP17_00720 PF07650 KH domain UP17_00720 PF00189 Ribosomal protein S3, C-terminal domain UP17_00725 PF00252 Ribosomal protein L16p/L10e UP17_00730 PF00831 Ribosomal L29 protein UP17_00735 PF00366 Ribosomal protein S17 UP17_00740 PF00238 Ribosomal protein L14p/L23e UP17_00745 PF00467 KOW motif UP17_00745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 UP17_00750 PF00673 ribosomal L5P family C-terminus UP17_00750 PF00281 Ribosomal protein L5 UP17_00755 PF00253 Ribosomal protein S14p/S29e UP17_00760 PF00410 Ribosomal protein S8 UP17_00765 PF00347 Ribosomal protein L6 UP17_00770 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast UP17_00775 PF00333 Ribosomal protein S5, N-terminal domain UP17_00775 PF03719 Ribosomal protein S5, C-terminal domain UP17_00780 PF00327 Ribosomal protein L30p/L7e UP17_00785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A UP17_00790 PF00344 SecY translocase UP17_00800 PF01176 Translation initiation factor 1A / IF-1 UP17_00805 PF00444 Ribosomal protein L36 UP17_00810 PF00416 Ribosomal protein S13/S18 UP17_00815 PF00411 Ribosomal protein S11 UP17_00820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain UP17_00820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain UP17_00820 PF01000 RNA polymerase Rpb3/RpoA insert domain UP17_00825 PF01196 Ribosomal protein L17 UP17_00830 PF00005 ABC transporter UP17_00835 PF00005 ABC transporter UP17_00840 PF02361 Cobalt transport protein UP17_00845 PF01416 tRNA pseudouridine synthase UP17_00855 PF00380 Ribosomal protein S9/S16 UP17_00870 PF01520 N-acetylmuramoyl-L-alanine amidase UP17_00875 PF10609 NUBPL iron-transfer P-loop NTPase UP17_00880 PF17898 Spore germination GerD central core domain UP17_00885 PF14089 KinB-signalling pathway activation in sporulation UP17_00890 PF01522 Polysaccharide deacetylase UP17_00960 PF00491 Arginase family UP17_00970 PF04542 Sigma-70 region 2 UP17_00970 PF08281 Sigma-70, region 4 UP17_00975 PF13490 Putative zinc-finger UP17_00980 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP17_00985 PF07949 YbbR-like protein UP17_00990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP17_00990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP17_00990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP17_00990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP17_00995 PF01380 SIS domain UP17_01000 PF08818 Domain of unknown function (DU1801) UP17_01015 PF00989 PAS fold UP17_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_01015 PF00672 HAMP domain UP17_01015 PF00512 His Kinase A (phospho-acceptor) domain UP17_01015 PF18698 Histidine kinase sensor domain UP17_01020 PF00072 Response regulator receiver domain UP17_01020 PF00486 Transcriptional regulatory protein, C terminal UP17_01025 PF00005 ABC transporter UP17_01025 PF00664 ABC transporter transmembrane region UP17_01030 PF07478 D-ala D-ala ligase C-terminus UP17_01030 PF01820 D-ala D-ala ligase N-terminus UP17_01040 PF00313 'Cold-shock' DNA-binding domain UP17_01060 PF01926 50S ribosome-binding GTPase UP17_01060 PF16360 GTP-binding GTPase Middle Region UP17_01060 PF13167 GTP-binding GTPase N-terminal UP17_01065 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UP17_01065 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_01070 PF01180 Dihydroorotate dehydrogenase UP17_01075 PF01979 Amidohydrolase family UP17_01080 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin UP17_01090 PF05651 Putative sugar diacid recognition UP17_01090 PF17853 GGDEF-like domain UP17_01090 PF13556 PucR C-terminal helix-turn-helix domain UP17_01095 PF00781 Diacylglycerol kinase catalytic domain UP17_01100 PF00999 Sodium/hydrogen exchanger family UP17_01120 PF08402 TOBE domain UP17_01120 PF00005 ABC transporter UP17_01125 PF00528 Binding-protein-dependent transport system inner membrane component UP17_01130 PF00528 Binding-protein-dependent transport system inner membrane component UP17_01135 PF13416 Bacterial extracellular solute-binding protein UP17_01140 PF05698 Bacterial trigger factor protein (TF) C-terminus UP17_01160 PF13580 SIS domain UP17_01170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase UP17_01175 PF01979 Amidohydrolase family UP17_01180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP17_01180 PF02378 Phosphotransferase system, EIIC UP17_01180 PF00367 phosphotransferase system, EIIB UP17_01185 PF00004 ATPase family associated with various cellular activities (AAA) UP17_01185 PF17862 AAA+ lid domain UP17_01185 PF06480 FtsH Extracellular UP17_01185 PF01434 Peptidase family M41 UP17_01190 PF01327 Polypeptide deformylase UP17_01200 PF07690 Major Facilitator Superfamily UP17_01205 PF01047 MarR family UP17_01210 PF09375 Imelysin UP17_01215 PF04261 Dyp-type peroxidase family UP17_01215 PF10518 TAT (twin-arginine translocation) pathway signal sequence UP17_01220 PF03239 Iron permease FTR1 family UP17_01230 PF13411 MerR HTH family regulatory protein UP17_01235 PF01595 Cyclin M transmembrane N-terminal domain UP17_01235 PF03471 Transporter associated domain UP17_01235 PF00571 CBS domain UP17_01240 PF01627 Hpt domain UP17_01240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_01240 PF00072 Response regulator receiver domain UP17_01240 PF00512 His Kinase A (phospho-acceptor) domain UP17_01245 PF01739 CheR methyltransferase, SAM binding domain UP17_01245 PF03705 CheR methyltransferase, all-alpha domain UP17_01250 PF07228 Stage II sporulation protein E (SpoIIE) UP17_01250 PF13426 PAS domain UP17_01255 PF12146 Serine aminopeptidase, S33 UP17_01290 PF00589 Phage integrase family UP17_01290 PF02899 Phage integrase, N-terminal SAM-like domain UP17_01295 PF00873 AcrB/AcrD/AcrF family UP17_01300 PF00440 Bacterial regulatory proteins, tetR family UP17_01300 PF16925 Tetracyclin repressor-like, C-terminal domain UP17_01305 PF00781 Diacylglycerol kinase catalytic domain UP17_01320 PF00375 Sodium:dicarboxylate symporter family UP17_01330 PF07478 D-ala D-ala ligase C-terminus UP17_01330 PF01820 D-ala D-ala ligase N-terminus UP17_01335 PF01225 Mur ligase family, catalytic domain UP17_01335 PF02875 Mur ligase family, glutamate ligase domain UP17_01335 PF08245 Mur ligase middle domain UP17_01345 PF00270 DEAD/DEAH box helicase UP17_01345 PF00271 Helicase conserved C-terminal domain UP17_01350 PF03703 Bacterial PH domain UP17_01355 PF03703 Bacterial PH domain UP17_01360 PF01694 Rhomboid family UP17_01365 PF01648 4'-phosphopantetheinyl transferase superfamily UP17_01380 PF01402 Ribbon-helix-helix protein, copG family UP17_01385 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system UP17_01390 PF08678 Rsbr N terminal UP17_01390 PF01740 STAS domain UP17_01395 PF01740 STAS domain UP17_01400 PF13581 Histidine kinase-like ATPase domain UP17_01405 PF07228 Stage II sporulation protein E (SpoIIE) UP17_01405 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain UP17_01410 PF01740 STAS domain UP17_01415 PF13581 Histidine kinase-like ATPase domain UP17_01420 PF04539 Sigma-70 region 3 UP17_01420 PF04545 Sigma-70, region 4 UP17_01420 PF04542 Sigma-70 region 2 UP17_01425 PF07228 Stage II sporulation protein E (SpoIIE) UP17_01430 PF17674 HHH domain UP17_01430 PF09371 Tex-like protein N-terminal domain UP17_01430 PF16921 Tex protein YqgF-like domain UP17_01430 PF00575 S1 RNA binding domain UP17_01435 PF10263 SprT-like family UP17_01515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE UP17_01520 PF00814 Glycoprotease family UP17_01525 PF00583 Acetyltransferase (GNAT) family UP17_01530 PF00814 Glycoprotease family UP17_01535 PF00005 ABC transporter UP17_01535 PF16326 ABC transporter C-terminal domain UP17_01535 PF12848 ABC transporter UP17_01540 PF01967 MoaC family UP17_01545 PF06971 Putative DNA-binding protein N-terminus UP17_01545 PF02629 CoA binding domain UP17_01555 PF02517 CPBP intramembrane metalloprotease UP17_01560 PF00166 Chaperonin 10 Kd subunit UP17_01575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_01575 PF00512 His Kinase A (phospho-acceptor) domain UP17_01580 PF00512 His Kinase A (phospho-acceptor) domain UP17_01580 PF00072 Response regulator receiver domain UP17_01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_01580 PF01627 Hpt domain UP17_01585 PF00854 POT family UP17_01595 PF07729 FCD domain UP17_01595 PF00392 Bacterial regulatory proteins, gntR family UP17_01600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP17_01600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP17_01605 PF02447 GntP family permease UP17_01610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP17_01610 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain UP17_01620 PF13152 Protein of unknown function (DUF3967) UP17_01620 PF13411 MerR HTH family regulatory protein UP17_01630 PF01098 Cell cycle protein UP17_01640 PF00905 Penicillin binding protein transpeptidase domain UP17_01640 PF00912 Transglycosylase UP17_01645 PF00302 Chloramphenicol acetyltransferase UP17_01655 PF12867 DinB superfamily UP17_01685 PF08348 YheO-like PAS domain UP17_01685 PF13309 HTH domain UP17_01690 PF01042 Endoribonuclease L-PSP UP17_01695 PF07690 Major Facilitator Superfamily UP17_01715 PF03009 Glycerophosphoryl diester phosphodiesterase family UP17_01725 PF05504 Spore germination B3/ GerAC like, C-terminal UP17_01730 PF03845 Spore germination protein UP17_01735 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_01740 PF00144 Beta-lactamase UP17_01750 PF09021 HutP UP17_01755 PF00221 Aromatic amino acid lyase UP17_01760 PF00324 Amino acid permease UP17_01765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UP17_01770 PF01039 Carboxyl transferase domain UP17_01770 PF17848 Acetyl-coA carboxylase zinc finger domain UP17_01785 PF01979 Amidohydrolase family UP17_01790 PF03606 C4-dicarboxylate anaerobic carrier UP17_01795 PF02954 Bacterial regulatory protein, Fis family UP17_01795 PF00158 Sigma-54 interaction domain UP17_01795 PF13426 PAS domain UP17_01800 PF00005 ABC transporter UP17_01800 PF00571 CBS domain UP17_01805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UP17_01820 PF01156 Inosine-uridine preferring nucleoside hydrolase UP17_01825 PF06013 Proteins of 100 residues with WXG UP17_01830 PF08817 WXG100 protein secretion system (Wss), protein YukD UP17_01835 PF10140 WXG100 protein secretion system (Wss), protein YukC UP17_01840 PF01580 FtsK/SpoIIIE family UP17_01840 PF12538 DNA transporter UP17_01850 PF17355 Family of unknown function (DUF5383) UP17_01855 PF07726 ATPase family associated with various cellular activities (AAA) UP17_01855 PF17863 AAA lid domain UP17_01865 PF01841 Transglutaminase-like superfamily UP17_01865 PF11992 Domain of unknown function (DUF3488) UP17_01865 PF13559 Domain of unknown function (DUF4129) UP17_01870 PF00117 Glutamine amidotransferase class-I UP17_01870 PF02540 NAD synthase UP17_01870 PF00958 GMP synthase C terminal domain UP17_01875 PF00860 Permease family UP17_01880 PF00874 PRD domain UP17_01880 PF03123 CAT RNA binding domain UP17_01885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP17_01885 PF00367 phosphotransferase system, EIIB UP17_01885 PF02378 Phosphotransferase system, EIIC UP17_01925 PF01202 Shikimate kinase UP17_01950 PF00731 AIR carboxylase UP17_01955 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain UP17_01955 PF02222 ATP-grasp domain UP17_01960 PF00206 Lyase UP17_01960 PF10397 Adenylosuccinate lyase C-terminus UP17_01965 PF01259 SAICAR synthetase UP17_01970 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase UP17_01980 PF02769 AIR synthase related protein, C-terminal domain UP17_01980 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain UP17_01980 PF00586 AIR synthase related protein, N-terminal domain UP17_01985 PF00156 Phosphoribosyl transferase domain UP17_01990 PF00586 AIR synthase related protein, N-terminal domain UP17_01990 PF02769 AIR synthase related protein, C-terminal domain UP17_01995 PF00551 Formyl transferase UP17_02000 PF02142 MGS-like domain UP17_02000 PF01808 AICARFT/IMPCHase bienzyme UP17_02005 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain UP17_02005 PF02844 Phosphoribosylglycinamide synthetase, N domain UP17_02005 PF02843 Phosphoribosylglycinamide synthetase, C domain UP17_02015 PF01979 Amidohydrolase family UP17_02015 PF13382 Adenine deaminase C-terminal domain UP17_02020 PF11258 Protein of unknown function (DUF3048) N-terminal domain UP17_02020 PF17479 Protein of unknown function (DUF3048) C-terminal domain UP17_02025 PF01371 Trp repressor protein UP17_02030 PF01884 PcrB family UP17_02035 PF00580 UvrD/REP helicase N-terminal domain UP17_02035 PF13361 UvrD-like helicase C-terminal domain UP17_02040 PF03120 NAD-dependent DNA ligase OB-fold domain UP17_02040 PF01653 NAD-dependent DNA ligase adenylation domain UP17_02040 PF03119 NAD-dependent DNA ligase C4 zinc finger domain UP17_02040 PF00533 BRCA1 C Terminus (BRCT) domain UP17_02040 PF12826 Helix-hairpin-helix motif UP17_02045 PF07537 CamS sex pheromone cAM373 precursor UP17_02050 PF02686 Glu-tRNAGln amidotransferase C subunit UP17_02055 PF01425 Amidase UP17_02060 PF02637 GatB domain UP17_02060 PF02934 GatB/GatE catalytic domain UP17_02070 PF00781 Diacylglycerol kinase catalytic domain UP17_02075 PF13673 Acetyltransferase (GNAT) domain UP17_02075 PF00583 Acetyltransferase (GNAT) family UP17_02085 PF01938 TRAM domain UP17_02085 PF05958 tRNA (Uracil-5-)-methyltransferase UP17_02085 PF13847 Methyltransferase domain UP17_02090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP17_02090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_02095 PF04239 Protein of unknown function (DUF421) UP17_02105 PF03862 SpoVAC/SpoVAEB sporulation membrane protein UP17_02110 PF07451 Stage V sporulation protein AD (SpoVAD) UP17_02115 PF03862 SpoVAC/SpoVAEB sporulation membrane protein UP17_02145 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein UP17_02150 PF05816 Toxic anion resistance protein (TelA) UP17_02155 PF00881 Nitroreductase family UP17_02160 PF07517 SecA DEAD-like domain UP17_02160 PF02810 SEC-C motif UP17_02160 PF01043 SecA preprotein cross-linking domain UP17_02160 PF07516 SecA Wing and Scaffold domain UP17_02165 PF00082 Subtilase family UP17_02170 PF07987 Domain of unkown function (DUF1775) UP17_02175 PF05425 Copper resistance protein D UP17_02175 PF13115 YtkA-like UP17_02175 PF04234 CopC domain UP17_02180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_02180 PF00989 PAS fold UP17_02180 PF13426 PAS domain UP17_02180 PF13188 PAS domain UP17_02180 PF00512 His Kinase A (phospho-acceptor) domain UP17_02190 PF06177 QueT transporter UP17_02195 PF04073 Aminoacyl-tRNA editing domain UP17_02205 PF13031 Protein of unknown function (DUF3892) UP17_02210 PF00107 Zinc-binding dehydrogenase UP17_02210 PF08240 Alcohol dehydrogenase GroES-like domain UP17_02215 PF00158 Sigma-54 interaction domain UP17_02215 PF02954 Bacterial regulatory protein, Fis family UP17_02215 PF00072 Response regulator receiver domain UP17_02220 PF00989 PAS fold UP17_02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_02220 PF00512 His Kinase A (phospho-acceptor) domain UP17_02225 PF00465 Iron-containing alcohol dehydrogenase UP17_02230 PF02225 PA domain UP17_02230 PF04389 Peptidase family M28 UP17_02245 PF00486 Transcriptional regulatory protein, C terminal UP17_02245 PF00072 Response regulator receiver domain UP17_02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_02250 PF00672 HAMP domain UP17_02250 PF00512 His Kinase A (phospho-acceptor) domain UP17_02255 PF02687 FtsX-like permease family UP17_02260 PF00005 ABC transporter UP17_02265 PF13649 Methyltransferase domain UP17_02270 PF08241 Methyltransferase domain UP17_02270 PF12697 Alpha/beta hydrolase family UP17_02275 PF00155 Aminotransferase class I and II UP17_02280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP17_02280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_02290 PF01547 Bacterial extracellular solute-binding protein UP17_02295 PF00528 Binding-protein-dependent transport system inner membrane component UP17_02300 PF00528 Binding-protein-dependent transport system inner membrane component UP17_02305 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UP17_02305 PF00356 Bacterial regulatory proteins, lacI family UP17_02315 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP17_02315 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP17_02320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP17_02320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP17_02330 PF00849 RNA pseudouridylate synthase UP17_02330 PF01479 S4 domain UP17_02340 PF00248 Aldo/keto reductase family UP17_02345 PF05525 Branched-chain amino acid transport protein UP17_02360 PF00005 ABC transporter UP17_02365 PF02653 Branched-chain amino acid transport system / permease component UP17_02380 PF13180 PDZ domain UP17_02400 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UP17_02405 PF00115 Cytochrome C and Quinol oxidase polypeptide I UP17_02410 PF00510 Cytochrome c oxidase subunit III UP17_02415 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UP17_02420 PF10787 Uncharacterised protein from bacillus cereus group UP17_02435 PF14489 QueF-like protein UP17_02440 PF00696 Amino acid kinase family UP17_02440 PF13840 ACT domain UP17_02445 PF00881 Nitroreductase family UP17_02455 PF00005 ABC transporter UP17_02455 PF00664 ABC transporter transmembrane region UP17_02460 PF00005 ABC transporter UP17_02460 PF00664 ABC transporter transmembrane region UP17_02475 PF13722 5TM C-terminal transporter carbon starvation CstA UP17_02475 PF02554 Carbon starvation protein CstA UP17_02485 PF00909 Ammonium Transporter Family UP17_02490 PF00543 Nitrogen regulatory protein P-II UP17_02500 PF00072 Response regulator receiver domain UP17_02500 PF04397 LytTr DNA-binding domain UP17_02505 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain UP17_02505 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain UP17_02510 PF01594 AI-2E family transporter UP17_02515 PF00171 Aldehyde dehydrogenase family UP17_02520 PF00375 Sodium:dicarboxylate symporter family UP17_02525 PF08546 Ketopantoate reductase PanE/ApbA C terminal UP17_02525 PF02558 Ketopantoate reductase PanE/ApbA UP17_02530 PF06725 3D domain UP17_02530 PF01476 LysM domain UP17_02535 PF07687 Peptidase dimerisation domain UP17_02535 PF01546 Peptidase family M20/M25/M40 UP17_02565 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family UP17_02570 PF13419 Haloacid dehalogenase-like hydrolase UP17_02580 PF00881 Nitroreductase family UP17_02585 PF00202 Aminotransferase class-III UP17_02590 PF00171 Aldehyde dehydrogenase family UP17_02600 PF00384 Molybdopterin oxidoreductase UP17_02600 PF01568 Molydopterin dinucleotide binding domain UP17_02600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UP17_02605 PF00474 Sodium:solute symporter family UP17_02610 PF13426 PAS domain UP17_02610 PF00512 His Kinase A (phospho-acceptor) domain UP17_02610 PF13188 PAS domain UP17_02610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_02610 PF00989 PAS fold UP17_02615 PF00271 Helicase conserved C-terminal domain UP17_02615 PF00270 DEAD/DEAH box helicase UP17_02620 PF00892 EamA-like transporter family UP17_02625 PF01053 Cys/Met metabolism PLP-dependent enzyme UP17_02635 PF00677 Lumazine binding domain UP17_02645 PF00885 6,7-dimethyl-8-ribityllumazine synthase UP17_02655 PF03631 Virulence factor BrkB UP17_02665 PF00999 Sodium/hydrogen exchanger family UP17_02670 PF02080 TrkA-C domain UP17_02675 PF00589 Phage integrase family UP17_02690 PF05145 Transition state regulatory protein AbrB UP17_02695 PF01618 MotA/TolQ/ExbB proton channel family UP17_02700 PF13677 Membrane MotB of proton-channel complex MotA/MotB UP17_02700 PF00691 OmpA family UP17_02705 PF01965 DJ-1/PfpI family UP17_02710 PF00557 Metallopeptidase family M24 UP17_02720 PF03205 Molybdopterin guanine dinucleotide synthesis protein B UP17_02725 PF03454 MoeA C-terminal region (domain IV) UP17_02725 PF03453 MoeA N-terminal region (domain I and II) UP17_02725 PF00994 Probable molybdopterin binding domain UP17_02730 PF06569 Protein of unknown function (DUF1128) UP17_02740 PF03631 Virulence factor BrkB UP17_02755 PF07690 Major Facilitator Superfamily UP17_02760 PF01699 Sodium/calcium exchanger protein UP17_02765 PF14167 YfkD-like protein UP17_02770 PF04055 Radical SAM superfamily UP17_02770 PF08756 YfkB-like domain UP17_02780 PF05681 Fumarate hydratase (Fumerase) UP17_02780 PF05683 Fumarase C-terminus UP17_02795 PF01522 Polysaccharide deacetylase UP17_02800 PF00730 HhH-GPD superfamily base excision DNA repair protein UP17_02805 PF05958 tRNA (Uracil-5-)-methyltransferase UP17_02805 PF01938 TRAM domain UP17_02810 PF01207 Dihydrouridine synthase (Dus) UP17_02815 PF07308 Protein of unknown function (DUF1456) UP17_02825 PF00155 Aminotransferase class I and II UP17_02830 PF01370 NAD dependent epimerase/dehydratase family UP17_02835 PF00324 Amino acid permease UP17_02845 PF00485 Phosphoribulokinase / Uridine kinase family UP17_02875 PF01638 HxlR-like helix-turn-helix UP17_02880 PF02525 Flavodoxin-like fold UP17_02895 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_02895 PF01348 Type II intron maturase UP17_02905 PF00768 D-alanyl-D-alanine carboxypeptidase UP17_02905 PF07943 Penicillin-binding protein 5, C-terminal domain UP17_02910 PF08141 Small acid-soluble spore protein H family UP17_02915 PF06039 Malate:quinone oxidoreductase (Mqo) UP17_02925 PF00665 Integrase core domain UP17_02925 PF13333 Integrase core domain UP17_02925 PF13276 HTH-like domain UP17_02930 PF04304 Protein of unknown function (DUF454) UP17_02935 PF07690 Major Facilitator Superfamily UP17_02960 PF03781 Sulfatase-modifying factor enzyme 1 UP17_02965 PF08970 Sporulation inhibitor A UP17_02975 PF13411 MerR HTH family regulatory protein UP17_02980 PF00106 short chain dehydrogenase UP17_02980 PF00561 alpha/beta hydrolase fold UP17_02990 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_03005 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_03025 PF03575 Peptidase family S51 UP17_03045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_03070 PF00440 Bacterial regulatory proteins, tetR family UP17_03090 PF01022 Bacterial regulatory protein, arsR family UP17_03110 PF13276 HTH-like domain UP17_03110 PF00665 Integrase core domain UP17_03110 PF13333 Integrase core domain UP17_03120 PF00753 Metallo-beta-lactamase superfamily UP17_03125 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_03125 PF01348 Type II intron maturase UP17_03145 PF00665 Integrase core domain UP17_03145 PF13333 Integrase core domain UP17_03145 PF13276 HTH-like domain UP17_03165 PF00144 Beta-lactamase UP17_03170 PF00144 Beta-lactamase UP17_03175 PF07883 Cupin domain UP17_03185 PF00106 short chain dehydrogenase UP17_03195 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UP17_03195 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UP17_03200 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_03210 PF01047 MarR family UP17_03215 PF00583 Acetyltransferase (GNAT) family UP17_03230 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_03255 PF12833 Helix-turn-helix domain UP17_03260 PF00083 Sugar (and other) transporter UP17_03265 PF00221 Aromatic amino acid lyase UP17_03275 PF01810 LysE type translocator UP17_03290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_03290 PF01348 Type II intron maturase UP17_03295 PF13411 MerR HTH family regulatory protein UP17_03295 PF06445 GyrI-like small molecule binding domain UP17_03300 PF04474 Protein of unknown function (DUF554) UP17_03305 PF01206 Sulfurtransferase TusA UP17_03305 PF00581 Rhodanese-like domain UP17_03310 PF07690 Major Facilitator Superfamily UP17_03315 PF07690 Major Facilitator Superfamily UP17_03325 PF03253 Urea transporter UP17_03330 PF00547 Urease, gamma subunit UP17_03335 PF00699 Urease beta subunit UP17_03340 PF01979 Amidohydrolase family UP17_03340 PF00449 Urease alpha-subunit, N-terminal domain UP17_03345 PF02814 UreE urease accessory protein, N-terminal domain UP17_03345 PF05194 UreE urease accessory protein, C-terminal domain UP17_03350 PF01730 UreF UP17_03355 PF02492 CobW/HypB/UreG, nucleotide-binding domain UP17_03360 PF01774 UreD urease accessory protein UP17_03365 PF13386 Cytochrome C biogenesis protein transmembrane region UP17_03380 PF00480 ROK family UP17_03380 PF01047 MarR family UP17_03390 PF08402 TOBE domain UP17_03390 PF00005 ABC transporter UP17_03395 PF00528 Binding-protein-dependent transport system inner membrane component UP17_03400 PF00206 Lyase UP17_03400 PF14698 Argininosuccinate lyase C-terminal UP17_03415 PF00474 Sodium:solute symporter family UP17_03425 PF00324 Amino acid permease UP17_03430 PF00324 Amino acid permease UP17_03435 PF13520 Amino acid permease UP17_03440 PF08031 Berberine and berberine like UP17_03440 PF01565 FAD binding domain UP17_03470 PF00005 ABC transporter UP17_03470 PF13732 Domain of unknown function (DUF4162) UP17_03475 PF12679 ABC-2 family transporter protein UP17_03480 PF00005 ABC transporter UP17_03505 PF00550 Phosphopantetheine attachment site UP17_03505 PF00668 Condensation domain UP17_03505 PF13193 AMP-binding enzyme C-terminal domain UP17_03505 PF00501 AMP-binding enzyme UP17_03510 PF00550 Phosphopantetheine attachment site UP17_03510 PF00668 Condensation domain UP17_03510 PF13193 AMP-binding enzyme C-terminal domain UP17_03510 PF00501 AMP-binding enzyme UP17_03510 PF07993 Male sterility protein UP17_03515 PF00550 Phosphopantetheine attachment site UP17_03515 PF07993 Male sterility protein UP17_03515 PF00668 Condensation domain UP17_03515 PF00501 AMP-binding enzyme UP17_03515 PF13193 AMP-binding enzyme C-terminal domain UP17_03520 PF00550 Phosphopantetheine attachment site UP17_03520 PF00501 AMP-binding enzyme UP17_03520 PF13193 AMP-binding enzyme C-terminal domain UP17_03520 PF00668 Condensation domain UP17_03525 PF13193 AMP-binding enzyme C-terminal domain UP17_03525 PF00668 Condensation domain UP17_03525 PF00550 Phosphopantetheine attachment site UP17_03525 PF00501 AMP-binding enzyme UP17_03530 PF00975 Thioesterase domain UP17_03535 PF00135 Carboxylesterase family UP17_03560 PF00005 ABC transporter UP17_03575 PF00512 His Kinase A (phospho-acceptor) domain UP17_03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_03580 PF00072 Response regulator receiver domain UP17_03580 PF00486 Transcriptional regulatory protein, C terminal UP17_03585 PF07690 Major Facilitator Superfamily UP17_03590 PF00005 ABC transporter UP17_03595 PF00528 Binding-protein-dependent transport system inner membrane component UP17_03600 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP17_03615 PF01370 NAD dependent epimerase/dehydratase family UP17_03615 PF08338 Domain of unknown function (DUF1731) UP17_03620 PF00155 Aminotransferase class I and II UP17_03635 PF00877 NlpC/P60 family UP17_03635 PF01476 LysM domain UP17_03650 PF03551 Transcriptional regulator PadR-like family UP17_03665 PF07690 Major Facilitator Superfamily UP17_03685 PF00067 Cytochrome P450 UP17_03690 PF12728 Helix-turn-helix domain UP17_03695 PF01594 AI-2E family transporter UP17_03700 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP17_03705 PF00528 Binding-protein-dependent transport system inner membrane component UP17_03710 PF00005 ABC transporter UP17_03720 PF03466 LysR substrate binding domain UP17_03720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_03735 PF00106 short chain dehydrogenase UP17_03740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_03740 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_03740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_03745 PF02803 Thiolase, C-terminal domain UP17_03745 PF00108 Thiolase, N-terminal domain UP17_03750 PF00501 AMP-binding enzyme UP17_03750 PF13193 AMP-binding enzyme C-terminal domain UP17_03755 PF14151 YfhD-like protein UP17_03760 PF01370 NAD dependent epimerase/dehydratase family UP17_03760 PF08338 Domain of unknown function (DUF1731) UP17_03765 PF02631 RecX family UP17_03770 PF08838 Protein of unknown function (DUF1811) UP17_03775 PF08176 Small acid-soluble spore protein K family UP17_03780 PF14043 WVELL protein UP17_03785 PF04307 LexA-binding, inner membrane-associated putative hydrolase UP17_03790 PF14815 NUDIX domain UP17_03790 PF00730 HhH-GPD superfamily base excision DNA repair protein UP17_03810 PF14182 YgaB-like protein UP17_03815 PF04167 Protein of unknown function (DUF402) UP17_03820 PF00664 ABC transporter transmembrane region UP17_03820 PF00005 ABC transporter UP17_03835 PF03358 NADPH-dependent FMN reductase UP17_03840 PF07690 Major Facilitator Superfamily UP17_03855 PF06081 Aromatic acid exporter family member 1 UP17_03860 PF04898 Glutamate synthase central domain UP17_03860 PF01645 Conserved region in glutamate synthase UP17_03860 PF01493 GXGXG motif UP17_03860 PF00310 Glutamine amidotransferases class-II UP17_03865 PF00202 Aminotransferase class-III UP17_03875 PF00005 ABC transporter UP17_03890 PF03061 Thioesterase superfamily UP17_03895 PF08267 Cobalamin-independent synthase, N-terminal domain UP17_03895 PF01717 Cobalamin-independent synthase, Catalytic domain UP17_03900 PF07885 Ion channel UP17_03905 PF00578 AhpC/TSA family UP17_03915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP17_03915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP17_03920 PF01475 Ferric uptake regulator family UP17_03925 PF11023 Zinc-ribbon containing domain UP17_03930 PF14540 Nucleotidyltransferase-like UP17_03930 PF18576 Helix-turn-helix domain UP17_04045 PF00589 Phage integrase family UP17_04060 PF00574 Clp protease UP17_04070 PF00528 Binding-protein-dependent transport system inner membrane component UP17_04080 PF03009 Glycerophosphoryl diester phosphodiesterase family UP17_04110 PF13667 ThiC-associated domain UP17_04110 PF01964 Radical SAM ThiC family UP17_04115 PF11553 Protein of unknown function (DUF3231) UP17_04120 PF07875 Coat F domain UP17_04125 PF02627 Carboxymuconolactone decarboxylase family UP17_04150 PF00797 N-acetyltransferase UP17_04165 PF07563 Protein of unknown function (DUF1541) UP17_04180 PF00534 Glycosyl transferases group 1 UP17_04220 PF00999 Sodium/hydrogen exchanger family UP17_04225 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_04230 PF05504 Spore germination B3/ GerAC like, C-terminal UP17_04240 PF03845 Spore germination protein UP17_04245 PF03845 Spore germination protein UP17_04260 PF04542 Sigma-70 region 2 UP17_04260 PF04545 Sigma-70, region 4 UP17_04270 PF13419 Haloacid dehalogenase-like hydrolase UP17_04275 PF07690 Major Facilitator Superfamily UP17_04275 PF00083 Sugar (and other) transporter UP17_04285 PF00072 Response regulator receiver domain UP17_04285 PF02954 Bacterial regulatory protein, Fis family UP17_04285 PF00158 Sigma-54 interaction domain UP17_04290 PF00491 Arginase family UP17_04300 PF00596 Class II Aldolase and Adducin N-terminal domain UP17_04305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP17_04310 PF00440 Bacterial regulatory proteins, tetR family UP17_04315 PF07690 Major Facilitator Superfamily UP17_04330 PF00085 Thioredoxin UP17_04340 PF00581 Rhodanese-like domain UP17_04345 PF00155 Aminotransferase class I and II UP17_04350 PF00158 Sigma-54 interaction domain UP17_04350 PF13426 PAS domain UP17_04350 PF02954 Bacterial regulatory protein, Fis family UP17_04355 PF00324 Amino acid permease UP17_04360 PF01042 Endoribonuclease L-PSP UP17_04365 PF00291 Pyridoxal-phosphate dependent enzyme UP17_04375 PF03448 MgtE intracellular N domain UP17_04375 PF00571 CBS domain UP17_04375 PF01769 Divalent cation transporter UP17_04380 PF00107 Zinc-binding dehydrogenase UP17_04380 PF16884 N-terminal domain of oxidoreductase UP17_04405 PF08331 Domain of unknown function (DUF1730) UP17_04410 PF04239 Protein of unknown function (DUF421) UP17_04415 PF12671 Putative amidase domain UP17_04420 PF00588 SpoU rRNA Methylase family UP17_04425 PF00881 Nitroreductase family UP17_04435 PF00072 Response regulator receiver domain UP17_04435 PF08664 YcbB domain UP17_04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_04445 PF04960 Glutaminase UP17_04450 PF13520 Amino acid permease UP17_04455 PF08298 PrkA AAA domain UP17_04455 PF06798 PrkA serine protein kinase C-terminal domain UP17_04470 PF04285 Protein of unknown function (DUF444) UP17_04475 PF07690 Major Facilitator Superfamily UP17_04480 PF07729 FCD domain UP17_04480 PF00392 Bacterial regulatory proteins, gntR family UP17_04490 PF00483 Nucleotidyl transferase UP17_04500 PF00535 Glycosyl transferase family 2 UP17_04510 PF13520 Amino acid permease UP17_04520 PF06800 Sugar transport protein UP17_04530 PF04205 FMN-binding domain UP17_04530 PF00890 FAD binding domain UP17_04530 PF03358 NADPH-dependent FMN reductase UP17_04535 PF01758 Sodium Bile acid symporter family UP17_04550 PF00881 Nitroreductase family UP17_04555 PF10502 Signal peptidase, peptidase S26 UP17_04560 PF02277 Phosphoribosyltransferase UP17_04565 PF00158 Sigma-54 interaction domain UP17_04570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP17_04570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP17_04570 PF00205 Thiamine pyrophosphate enzyme, central domain UP17_04580 PF00877 NlpC/P60 family UP17_04580 PF01476 LysM domain UP17_04585 PF09323 Domain of unknown function (DUF1980) UP17_04590 PF03773 Predicted permease UP17_04595 PF02245 Methylpurine-DNA glycosylase (MPG) UP17_04600 PF07690 Major Facilitator Superfamily UP17_04605 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP17_04605 PF03807 NADP oxidoreductase coenzyme F420-dependent UP17_04610 PF02913 FAD linked oxidases, C-terminal domain UP17_04610 PF01565 FAD binding domain UP17_04615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UP17_04615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain UP17_04620 PF12787 EcsC protein family UP17_04625 PF17853 GGDEF-like domain UP17_04625 PF13556 PucR C-terminal helix-turn-helix domain UP17_04625 PF06018 CodY GAF-like domain UP17_04630 PF01384 Phosphate transporter family UP17_04635 PF01865 Protein of unknown function DUF47 UP17_04640 PF01384 Phosphate transporter family UP17_04645 PF00248 Aldo/keto reductase family UP17_04650 PF04226 Transglycosylase associated protein UP17_04655 PF00849 RNA pseudouridylate synthase UP17_04655 PF01479 S4 domain UP17_04675 PF00795 Carbon-nitrogen hydrolase UP17_04675 PF00583 Acetyltransferase (GNAT) family UP17_04680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP17_04680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP17_04680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP17_04680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP17_04685 PF03358 NADPH-dependent FMN reductase UP17_04690 PF14148 YhdB-like protein UP17_04695 PF01476 LysM domain UP17_04695 PF00246 Zinc carboxypeptidase UP17_04705 PF04055 Radical SAM superfamily UP17_04705 PF06463 Molybdenum Cofactor Synthesis C UP17_04710 PF01380 SIS domain UP17_04710 PF01418 Helix-turn-helix domain, rpiR family UP17_04715 PF07687 Peptidase dimerisation domain UP17_04715 PF01546 Peptidase family M20/M25/M40 UP17_04725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP17_04725 PF13378 Enolase C-terminal domain-like UP17_04735 PF04293 SpoVR like protein UP17_04740 PF01022 Bacterial regulatory protein, arsR family UP17_04745 PF02040 Arsenical pump membrane protein UP17_04750 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP17_04755 PF01527 Transposase UP17_04760 PF13333 Integrase core domain UP17_04760 PF13276 HTH-like domain UP17_04760 PF00665 Integrase core domain UP17_04765 PF13145 PPIC-type PPIASE domain UP17_04775 PF09335 SNARE associated Golgi protein UP17_04780 PF00486 Transcriptional regulatory protein, C terminal UP17_04780 PF00072 Response regulator receiver domain UP17_04785 PF00989 PAS fold UP17_04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_04785 PF16736 Single Cache-like UP17_04785 PF00512 His Kinase A (phospho-acceptor) domain UP17_04805 PF01037 Lrp/AsnC ligand binding domain UP17_04805 PF13404 AsnC-type helix-turn-helix domain UP17_04810 PF02417 Chromate transporter UP17_04815 PF02417 Chromate transporter UP17_04825 PF00892 EamA-like transporter family UP17_04840 PF00324 Amino acid permease UP17_04845 PF07969 Amidohydrolase family UP17_04855 PF07905 Purine catabolism regulatory protein-like family UP17_04855 PF13556 PucR C-terminal helix-turn-helix domain UP17_04855 PF17853 GGDEF-like domain UP17_04860 PF01546 Peptidase family M20/M25/M40 UP17_04865 PF00266 Aminotransferase class-V UP17_04870 PF01979 Amidohydrolase family UP17_04880 PF00474 Sodium:solute symporter family UP17_04890 PF14535 AMP-binding enzyme C-terminal domain UP17_04890 PF00501 AMP-binding enzyme UP17_04905 PF05138 Phenylacetic acid catabolic protein UP17_04930 PF00378 Enoyl-CoA hydratase/isomerase UP17_04935 PF00378 Enoyl-CoA hydratase/isomerase UP17_04940 PF00171 Aldehyde dehydrogenase family UP17_04945 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP17_04945 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP17_04950 PF00108 Thiolase, N-terminal domain UP17_04950 PF02803 Thiolase, C-terminal domain UP17_04955 PF00378 Enoyl-CoA hydratase/isomerase UP17_04965 PF00132 Bacterial transferase hexapeptide (six repeats) UP17_04970 PF03060 Nitronate monooxygenase UP17_04975 PF09335 SNARE associated Golgi protein UP17_04990 PF01545 Cation efflux family UP17_04990 PF16916 Dimerisation domain of Zinc Transporter UP17_04995 PF00486 Transcriptional regulatory protein, C terminal UP17_04995 PF00072 Response regulator receiver domain UP17_05000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_05000 PF16736 Single Cache-like UP17_05000 PF00989 PAS fold UP17_05000 PF00512 His Kinase A (phospho-acceptor) domain UP17_05025 PF03960 ArsC family UP17_05030 PF00528 Binding-protein-dependent transport system inner membrane component UP17_05045 PF00313 'Cold-shock' DNA-binding domain UP17_05050 PF00258 Flavodoxin UP17_05055 PF00268 Ribonucleotide reductase, small chain UP17_05060 PF02867 Ribonucleotide reductase, barrel domain UP17_05060 PF03477 ATP cone domain UP17_05060 PF00317 Ribonucleotide reductase, all-alpha domain UP17_05065 PF01368 DHH family UP17_05065 PF02833 DHHA2 domain UP17_05070 PF00916 Sulfate permease family UP17_05070 PF01740 STAS domain UP17_05085 PF07690 Major Facilitator Superfamily UP17_05090 PF03600 Citrate transporter UP17_05105 PF03060 Nitronate monooxygenase UP17_05110 PF00583 Acetyltransferase (GNAT) family UP17_05120 PF00392 Bacterial regulatory proteins, gntR family UP17_05120 PF00155 Aminotransferase class I and II UP17_05140 PF01595 Cyclin M transmembrane N-terminal domain UP17_05140 PF03471 Transporter associated domain UP17_05140 PF00571 CBS domain UP17_05145 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_05145 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP17_05155 PF09335 SNARE associated Golgi protein UP17_05160 PF01595 Cyclin M transmembrane N-terminal domain UP17_05160 PF00571 CBS domain UP17_05160 PF03471 Transporter associated domain UP17_05165 PF00512 His Kinase A (phospho-acceptor) domain UP17_05165 PF02743 Cache domain UP17_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_05170 PF16916 Dimerisation domain of Zinc Transporter UP17_05170 PF01545 Cation efflux family UP17_05180 PF09515 Thiamine transporter protein (Thia_YuaJ) UP17_05185 PF00582 Universal stress protein family UP17_05190 PF00905 Penicillin binding protein transpeptidase domain UP17_05190 PF00912 Transglycosylase UP17_05200 PF01979 Amidohydrolase family UP17_05210 PF00676 Dehydrogenase E1 component UP17_05215 PF02780 Transketolase, C-terminal domain UP17_05215 PF02779 Transketolase, pyrimidine binding domain UP17_05220 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP17_05220 PF02817 e3 binding domain UP17_05220 PF00364 Biotin-requiring enzyme UP17_05225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP17_05225 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_05235 PF00324 Amino acid permease UP17_05240 PF00155 Aminotransferase class I and II UP17_05245 PF01037 Lrp/AsnC ligand binding domain UP17_05255 PF01037 Lrp/AsnC ligand binding domain UP17_05265 PF01906 Putative heavy-metal-binding UP17_05270 PF00199 Catalase UP17_05275 PF03109 ABC1 family UP17_05305 PF00571 CBS domain UP17_05305 PF00478 IMP dehydrogenase / GMP reductase domain UP17_05325 PF00664 ABC transporter transmembrane region UP17_05325 PF00005 ABC transporter UP17_05330 PF00005 ABC transporter UP17_05330 PF00664 ABC transporter transmembrane region UP17_05335 PF01197 Ribosomal protein L31 UP17_05340 PF01053 Cys/Met metabolism PLP-dependent enzyme UP17_05345 PF01053 Cys/Met metabolism PLP-dependent enzyme UP17_05350 PF00206 Lyase UP17_05350 PF10415 Fumarase C C-terminus UP17_05365 PF13556 PucR C-terminal helix-turn-helix domain UP17_05400 PF14398 YheC/D like ATP-grasp UP17_05405 PF14398 YheC/D like ATP-grasp UP17_05410 PF14398 YheC/D like ATP-grasp UP17_05420 PF04286 Protein of unknown function (DUF445) UP17_05425 PF06133 Control of competence regulator ComK, YlbF/YmcA UP17_05465 PF13193 AMP-binding enzyme C-terminal domain UP17_05465 PF00501 AMP-binding enzyme UP17_05470 PF00378 Enoyl-CoA hydratase/isomerase UP17_05485 PF14120 YhzD-like protein UP17_05490 PF00291 Pyridoxal-phosphate dependent enzyme UP17_05500 PF00149 Calcineurin-like phosphoesterase UP17_05505 PF13514 AAA domain UP17_05515 PF00005 ABC transporter UP17_05525 PF01966 HD domain UP17_05530 PF14147 Sporulation protein YhaL UP17_05535 PF05698 Bacterial trigger factor protein (TF) C-terminus UP17_05540 PF09680 Family of unknown function UP17_05545 PF09680 Family of unknown function UP17_05565 PF01047 MarR family UP17_05570 PF12732 YtxH-like protein UP17_05580 PF17099 Tryptophan transporter TrpP UP17_05585 PF00266 Aminotransferase class-V UP17_05590 PF01230 HIT domain UP17_05595 PF00005 ABC transporter UP17_05600 PF05975 Bacterial ABC transporter protein EcsB UP17_05605 PF12787 EcsC protein family UP17_05610 PF07687 Peptidase dimerisation domain UP17_05610 PF01546 Peptidase family M20/M25/M40 UP17_05620 PF03992 Antibiotic biosynthesis monooxygenase UP17_05625 PF01208 Uroporphyrinogen decarboxylase (URO-D) UP17_05635 PF17932 Tetracyclin repressor-like, C-terminal domain UP17_05635 PF00440 Bacterial regulatory proteins, tetR family UP17_05640 PF12706 Beta-lactamase superfamily domain UP17_05645 PF03099 Biotin/lipoate A/B protein ligase family UP17_05645 PF10437 Bacterial lipoate protein ligase C-terminus UP17_05650 PF00501 AMP-binding enzyme UP17_05650 PF13193 AMP-binding enzyme C-terminal domain UP17_05655 PF01966 HD domain UP17_05665 PF01435 Peptidase family M48 UP17_05665 PF16491 CAAX prenyl protease N-terminal, five membrane helices UP17_05670 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_05670 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP17_05680 PF06338 ComK protein UP17_05690 PF09335 SNARE associated Golgi protein UP17_05695 PF10502 Signal peptidase, peptidase S26 UP17_05700 PF12705 PD-(D/E)XK nuclease superfamily UP17_05705 PF13361 UvrD-like helicase C-terminal domain UP17_05705 PF00580 UvrD/REP helicase N-terminal domain UP17_05705 PF12705 PD-(D/E)XK nuclease superfamily UP17_05715 PF00291 Pyridoxal-phosphate dependent enzyme UP17_05740 PF10803 Spore germination GerPB UP17_05745 PF10676 Spore germination protein gerPA/gerPF UP17_05750 PF00501 AMP-binding enzyme UP17_05750 PF13193 AMP-binding enzyme C-terminal domain UP17_05755 PF07690 Major Facilitator Superfamily UP17_05760 PF04235 Protein of unknown function (DUF418) UP17_05765 PF07457 Protein of unknown function (DUF1516) UP17_05775 PF13537 Glutamine amidotransferase domain UP17_05775 PF00733 Asparagine synthase UP17_05780 PF00128 Alpha amylase, catalytic domain UP17_05780 PF16657 Maltogenic Amylase, C-terminal domain UP17_05780 PF02903 Alpha amylase, N-terminal ig-like domain UP17_05785 PF13416 Bacterial extracellular solute-binding protein UP17_05790 PF03423 Carbohydrate binding domain (family 25) UP17_05790 PF01373 Glycosyl hydrolase family 14 UP17_05790 PF00128 Alpha amylase, catalytic domain UP17_05795 PF00128 Alpha amylase, catalytic domain UP17_05795 PF16657 Maltogenic Amylase, C-terminal domain UP17_05800 PF00356 Bacterial regulatory proteins, lacI family UP17_05800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UP17_05815 PF04461 Protein of unknown function (DUF520) UP17_05820 PF02645 Uncharacterised protein, DegV family COG1307 UP17_05825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_05825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP17_05830 PF12758 Protein of unknown function (DUF3813) UP17_05840 PF00326 Prolyl oligopeptidase family UP17_05845 PF01883 Iron-sulfur cluster assembly protein UP17_05850 PF06463 Molybdenum Cofactor Synthesis C UP17_05850 PF04055 Radical SAM superfamily UP17_05855 PF00027 Cyclic nucleotide-binding domain UP17_05855 PF00325 Bacterial regulatory proteins, crp family UP17_05860 PF02774 Semialdehyde dehydrogenase, dimerisation domain UP17_05860 PF01118 Semialdehyde dehydrogenase, NAD binding domain UP17_05865 PF01960 ArgJ family UP17_05870 PF00696 Amino acid kinase family UP17_05875 PF00202 Aminotransferase class-III UP17_05880 PF00117 Glutamine amidotransferase class-I UP17_05880 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UP17_05885 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP17_05885 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP17_05890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UP17_05890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UP17_05895 PF14168 YjzC-like protein UP17_05905 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_05915 PF07883 Cupin domain UP17_05920 PF01494 FAD binding domain UP17_05925 PF17871 AAA lid domain UP17_05925 PF10431 C-terminal, D2-small domain, of ClpB protein UP17_05925 PF00004 ATPase family associated with various cellular activities (AAA) UP17_05925 PF02861 Clp amino terminal domain, pathogenicity island component UP17_05925 PF07724 AAA domain (Cdc48 subfamily) UP17_05955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal UP17_05955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III UP17_05960 PF02801 Beta-ketoacyl synthase, C-terminal domain UP17_05960 PF00109 Beta-ketoacyl synthase, N-terminal domain UP17_05965 PF10026 Predicted Zn-dependent protease (DUF2268) UP17_05970 PF12227 Protein of unknown function (DUF3603) UP17_05975 PF00579 tRNA synthetases class I (W and Y) UP17_05990 PF13508 Acetyltransferase (GNAT) domain UP17_06000 PF03960 ArsC family UP17_06005 PF05389 Negative regulator of genetic competence (MecA) UP17_06010 PF13091 PLD-like domain UP17_06010 PF13396 Phospholipase_D-nuclease N-terminal UP17_06015 PF06054 Competence protein CoiA-like family UP17_06020 PF01432 Peptidase family M3 UP17_06020 PF08439 Oligopeptidase F UP17_06035 PF01152 Bacterial-like globin UP17_06040 PF01464 Transglycosylase SLT domain UP17_06045 PF01928 CYTH domain UP17_06050 PF04607 Region found in RelA / SpoT proteins UP17_06055 PF01513 ATP-NAD kinase UP17_06060 PF00849 RNA pseudouridylate synthase UP17_06065 PF00149 Calcineurin-like phosphoesterase UP17_06070 PF03448 MgtE intracellular N domain UP17_06070 PF00571 CBS domain UP17_06070 PF01769 Divalent cation transporter UP17_06105 PF07098 Protein of unknown function (DUF1360) UP17_06115 PF03862 SpoVAC/SpoVAEB sporulation membrane protein UP17_06120 PF07451 Stage V sporulation protein AD (SpoVAD) UP17_06125 PF03862 SpoVAC/SpoVAEB sporulation membrane protein UP17_06130 PF14069 Stage VI sporulation protein F UP17_06140 PF13361 UvrD-like helicase C-terminal domain UP17_06140 PF00580 UvrD/REP helicase N-terminal domain UP17_06150 PF07552 Spore Coat Protein X and V domain UP17_06160 PF13673 Acetyltransferase (GNAT) domain UP17_06170 PF00756 Putative esterase UP17_06175 PF04608 Phosphatidylglycerophosphatase A UP17_06190 PF01416 tRNA pseudouridine synthase UP17_06195 PF01965 DJ-1/PfpI family UP17_06200 PF04239 Protein of unknown function (DUF421) UP17_06205 PF01061 ABC-2 type transporter UP17_06210 PF00005 ABC transporter UP17_06215 PF00528 Binding-protein-dependent transport system inner membrane component UP17_06225 PF02272 DHHA1 domain UP17_06225 PF01368 DHH family UP17_06230 PF02515 CoA-transferase family III UP17_06235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_06235 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_06235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_06250 PF08757 CotH kinase protein UP17_06265 PF16123 Hydroxyacylglutathione hydrolase C-terminus UP17_06265 PF00753 Metallo-beta-lactamase superfamily UP17_06270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP17_06270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP17_06275 PF07690 Major Facilitator Superfamily UP17_06285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP17_06285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP17_06295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP17_06300 PF00232 Glycosyl hydrolase family 1 UP17_06305 PF00916 Sulfate permease family UP17_06305 PF01740 STAS domain UP17_06310 PF13411 MerR HTH family regulatory protein UP17_06315 PF00135 Carboxylesterase family UP17_06325 PF00324 Amino acid permease UP17_06330 PF03301 Tryptophan 2,3-dioxygenase UP17_06335 PF01467 Cytidylyltransferase-like UP17_06345 PF00528 Binding-protein-dependent transport system inner membrane component UP17_06350 PF00528 Binding-protein-dependent transport system inner membrane component UP17_06355 PF17850 CysA C-terminal regulatory domain UP17_06355 PF00005 ABC transporter UP17_06355 PF12857 TOBE-like domain UP17_06360 PF00877 NlpC/P60 family UP17_06380 PF01263 Aldose 1-epimerase UP17_06385 PF13520 Amino acid permease UP17_06405 PF00313 'Cold-shock' DNA-binding domain UP17_06415 PF02073 Thermophilic metalloprotease (M29) UP17_06420 PF00171 Aldehyde dehydrogenase family UP17_06425 PF07690 Major Facilitator Superfamily UP17_06430 PF02581 Thiamine monophosphate synthase UP17_06440 PF08543 Phosphomethylpyrimidine kinase UP17_06440 PF02581 Thiamine monophosphate synthase UP17_06450 PF03070 TENA/THI-4/PQQC family UP17_06465 PF00583 Acetyltransferase (GNAT) family UP17_06485 PF13539 D-alanyl-D-alanine carboxypeptidase UP17_06490 PF03061 Thioesterase superfamily UP17_06495 PF01027 Inhibitor of apoptosis-promoting Bax1 UP17_06500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_06500 PF00005 ABC transporter UP17_06505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_06505 PF00005 ABC transporter UP17_06510 PF00528 Binding-protein-dependent transport system inner membrane component UP17_06515 PF00528 Binding-protein-dependent transport system inner membrane component UP17_06520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP17_06530 PF05343 M42 glutamyl aminopeptidase UP17_06535 PF16242 Pyridoxamine 5'-phosphate oxidase like UP17_06540 PF03575 Peptidase family S51 UP17_06550 PF00082 Subtilase family UP17_06550 PF05922 Peptidase inhibitor I9 UP17_06555 PF02096 60Kd inner membrane protein UP17_06575 PF02566 OsmC-like protein UP17_06580 PF00392 Bacterial regulatory proteins, gntR family UP17_06585 PF00005 ABC transporter UP17_06595 PF00313 'Cold-shock' DNA-binding domain UP17_06600 PF00009 Elongation factor Tu GTP binding domain UP17_06600 PF03144 Elongation factor Tu domain 2 UP17_06600 PF16658 Class II release factor RF3, C-terminal domain UP17_06610 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP17_06610 PF00989 PAS fold UP17_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_06610 PF17203 Single cache domain 3 UP17_06615 PF00072 Response regulator receiver domain UP17_06620 PF00390 Malic enzyme, N-terminal domain UP17_06620 PF03949 Malic enzyme, NAD binding domain UP17_06625 PF03547 Membrane transport protein UP17_06635 PF01098 Cell cycle protein UP17_06645 PF00171 Aldehyde dehydrogenase family UP17_06650 PF03741 Integral membrane protein TerC family UP17_06655 PF04542 Sigma-70 region 2 UP17_06660 PF12791 Anti-sigma factor N-terminus UP17_06665 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP17_06670 PF02386 Cation transport protein UP17_06675 PF00512 His Kinase A (phospho-acceptor) domain UP17_06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_06675 PF00989 PAS fold UP17_06715 PF01757 Acyltransferase family UP17_06720 PF00512 His Kinase A (phospho-acceptor) domain UP17_06720 PF13188 PAS domain UP17_06720 PF00989 PAS fold UP17_06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_06720 PF13426 PAS domain UP17_06730 PF02535 ZIP Zinc transporter UP17_06735 PF07690 Major Facilitator Superfamily UP17_06740 PF02743 Cache domain UP17_06740 PF00512 His Kinase A (phospho-acceptor) domain UP17_06740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_06745 PF01047 MarR family UP17_06775 PF00565 Staphylococcal nuclease homologue UP17_06780 PF00005 ABC transporter UP17_06785 PF03649 Uncharacterised protein family (UPF0014) UP17_06790 PF00381 PTS HPr component phosphorylation site UP17_06795 PF02896 PEP-utilising enzyme, TIM barrel domain UP17_06795 PF00391 PEP-utilising enzyme, mobile domain UP17_06795 PF05524 PEP-utilising enzyme, N-terminal UP17_06800 PF00106 short chain dehydrogenase UP17_06805 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UP17_06805 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP17_06815 PF00155 Aminotransferase class I and II UP17_06820 PF01544 CorA-like Mg2+ transporter protein UP17_06835 PF01584 CheW-like domain UP17_06835 PF00072 Response regulator receiver domain UP17_06850 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UP17_06855 PF02537 CrcB-like protein, Camphor Resistance (CrcB) UP17_06860 PF10518 TAT (twin-arginine translocation) pathway signal sequence UP17_06860 PF00149 Calcineurin-like phosphoesterase UP17_06865 PF02080 TrkA-C domain UP17_06865 PF03600 Citrate transporter UP17_06870 PF10388 EAL-domain associated signalling protein domain UP17_06870 PF00563 EAL domain UP17_06890 PF00753 Metallo-beta-lactamase superfamily UP17_06895 PF08796 Protein of unknown function (DUF1797) UP17_06905 PF07690 Major Facilitator Superfamily UP17_06910 PF03466 LysR substrate binding domain UP17_06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_06915 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal UP17_06915 PF00132 Bacterial transferase hexapeptide (six repeats) UP17_06915 PF14602 Hexapeptide repeat of succinyl-transferase UP17_06920 PF01546 Peptidase family M20/M25/M40 UP17_06920 PF07687 Peptidase dimerisation domain UP17_06925 PF02254 TrkA-N domain UP17_06925 PF02080 TrkA-C domain UP17_06930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UP17_06930 PF17770 Ribonuclease J C-terminal domain UP17_06930 PF00753 Metallo-beta-lactamase superfamily UP17_06945 PF01327 Polypeptide deformylase UP17_06950 PF10368 Putative cell-wall binding lipoprotein UP17_06955 PF00676 Dehydrogenase E1 component UP17_06960 PF02780 Transketolase, C-terminal domain UP17_06960 PF02779 Transketolase, pyrimidine binding domain UP17_06965 PF02817 e3 binding domain UP17_06965 PF00364 Biotin-requiring enzyme UP17_06965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP17_06970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP17_06970 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_06990 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UP17_06990 PF01276 Orn/Lys/Arg decarboxylase, major domain UP17_06995 PF03060 Nitronate monooxygenase UP17_07000 PF05256 Uncharacterised protein family (UPF0223) UP17_07010 PF00591 Glycosyl transferase family, a/b domain UP17_07010 PF00117 Glutamine amidotransferase class-I UP17_07010 PF02885 Glycosyl transferase family, helical bundle domain UP17_07015 PF00591 Glycosyl transferase family, a/b domain UP17_07015 PF02885 Glycosyl transferase family, helical bundle domain UP17_07020 PF00218 Indole-3-glycerol phosphate synthase UP17_07025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase UP17_07030 PF00291 Pyridoxal-phosphate dependent enzyme UP17_07035 PF00290 Tryptophan synthase alpha chain UP17_07040 PF06335 Protein of unknown function (DUF1054) UP17_07050 PF00459 Inositol monophosphatase family UP17_07055 PF17259 Family of unknown function (DUF5325) UP17_07065 PF14036 YlaH-like protein UP17_07080 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) UP17_07085 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) UP17_07090 PF02562 PhoH-like protein UP17_07090 PF13638 PIN domain UP17_07100 PF07408 Protein of unknown function (DUF1507) UP17_07105 PF02785 Biotin carboxylase C-terminal domain UP17_07105 PF00682 HMGL-like UP17_07105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP17_07105 PF02436 Conserved carboxylase domain UP17_07105 PF00289 Biotin carboxylase, N-terminal domain UP17_07105 PF00364 Biotin-requiring enzyme UP17_07110 PF02628 Cytochrome oxidase assembly protein UP17_07115 PF01040 UbiA prenyltransferase family UP17_07120 PF00034 Cytochrome c UP17_07120 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UP17_07120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain UP17_07125 PF00115 Cytochrome C and Quinol oxidase polypeptide I UP17_07130 PF00510 Cytochrome c oxidase subunit III UP17_07135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UP17_07140 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) UP17_07150 PF08868 YugN-like family UP17_07155 PF14504 CAP-associated N-terminal UP17_07155 PF00188 Cysteine-rich secretory protein family UP17_07160 PF14071 Putative coat protein UP17_07165 PF14003 YlbE-like protein UP17_07175 PF06133 Control of competence regulator ComK, YlbF/YmcA UP17_07185 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) UP17_07200 PF01467 Cytidylyltransferase-like UP17_07205 PF07670 Nucleoside recognition UP17_07210 PF01734 Patatin-like phospholipase UP17_07215 PF05362 Lon protease (S16) C-terminal proteolytic domain UP17_07215 PF13180 PDZ domain UP17_07225 PF05636 HIGH Nucleotidyl Transferase UP17_07230 PF02620 Large ribosomal RNA subunit accumulation protein YceD UP17_07235 PF01783 Ribosomal L32p protein family UP17_07240 PF00378 Enoyl-CoA hydratase/isomerase UP17_07250 PF00583 Acetyltransferase (GNAT) family UP17_07255 PF08546 Ketopantoate reductase PanE/ApbA C terminal UP17_07255 PF02558 Ketopantoate reductase PanE/ApbA UP17_07265 PF10079 Bacillithiol biosynthesis BshC UP17_07270 PF02381 MraZ protein, putative antitoxin-like UP17_07275 PF01795 MraW methylase family UP17_07295 PF03793 PASTA domain UP17_07295 PF03717 Penicillin-binding Protein dimerisation domain UP17_07295 PF00905 Penicillin binding protein transpeptidase domain UP17_07300 PF02875 Mur ligase family, glutamate ligase domain UP17_07300 PF01225 Mur ligase family, catalytic domain UP17_07300 PF08245 Mur ligase middle domain UP17_07305 PF00953 Glycosyl transferase family 4 UP17_07305 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 UP17_07310 PF02875 Mur ligase family, glutamate ligase domain UP17_07310 PF08245 Mur ligase middle domain UP17_07315 PF01098 Cell cycle protein UP17_07320 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain UP17_07320 PF01565 FAD binding domain UP17_07325 PF08478 POTRA domain, FtsQ-type UP17_07330 PF05949 Bacterial protein of unknown function (DUF881) UP17_07335 PF05949 Bacterial protein of unknown function (DUF881) UP17_07340 PF06947 Protein of unknown function (DUF1290) UP17_07345 PF02491 SHS2 domain inserted in FTSA UP17_07350 PF00091 Tubulin/FtsZ family, GTPase domain UP17_07350 PF12327 FtsZ family, C-terminal domain UP17_07355 PF03419 Sporulation factor SpoIIGA UP17_07360 PF04545 Sigma-70, region 4 UP17_07360 PF04542 Sigma-70 region 2 UP17_07365 PF04545 Sigma-70, region 4 UP17_07365 PF04539 Sigma-70 region 3 UP17_07365 PF04542 Sigma-70 region 2 UP17_07370 PF05239 PRC-barrel domain UP17_07380 PF01168 Alanine racemase, N-terminal domain UP17_07385 PF04472 Cell division protein SepF UP17_07390 PF02325 YGGT family UP17_07395 PF01479 S4 domain UP17_07395 PF17774 Putative RNA-binding domain in YlmH UP17_07400 PF05103 DivIVA protein UP17_07405 PF08264 Anticodon-binding domain of tRNA UP17_07405 PF06827 Zinc finger found in FPG and IleRS UP17_07405 PF00133 tRNA synthetases class I (I, L, M and V) UP17_07410 PF01252 Signal peptidase (SPase) II UP17_07415 PF00849 RNA pseudouridylate synthase UP17_07415 PF01479 S4 domain UP17_07420 PF00156 Phosphoribosyl transferase domain UP17_07425 PF00860 Permease family UP17_07430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain UP17_07430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain UP17_07435 PF01979 Amidohydrolase family UP17_07440 PF00117 Glutamine amidotransferase class-I UP17_07440 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain UP17_07445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP17_07445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP17_07445 PF02142 MGS-like domain UP17_07450 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B UP17_07455 PF01180 Dihydroorotate dehydrogenase UP17_07460 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family UP17_07465 PF00156 Phosphoribosyl transferase domain UP17_07475 PF00690 Cation transporter/ATPase, N-terminus UP17_07475 PF00689 Cation transporting ATPase, C-terminus UP17_07480 PF03755 YicC-like family, N-terminal region UP17_07480 PF08340 Domain of unknown function (DUF1732) UP17_07485 PF04025 Domain of unknown function (DUF370) UP17_07490 PF00625 Guanylate kinase UP17_07495 PF01192 RNA polymerase Rpb6 UP17_07500 PF04127 DNA / pantothenate metabolism flavoprotein UP17_07500 PF02441 Flavoprotein UP17_07505 PF18074 Primosomal protein N C-terminal domain UP17_07505 PF17764 3′ DNA-binding domain (3′BD) UP17_07505 PF18319 PriA DNA helicase Cys-rich region (CRR) domain UP17_07505 PF04851 Type III restriction enzyme, res subunit UP17_07505 PF00271 Helicase conserved C-terminal domain UP17_07510 PF01327 Polypeptide deformylase UP17_07515 PF02911 Formyl transferase, C-terminal domain UP17_07515 PF00551 Formyl transferase UP17_07520 PF01029 NusB family UP17_07520 PF01189 16S rRNA methyltransferase RsmB/F UP17_07525 PF04055 Radical SAM superfamily UP17_07535 PF00069 Protein kinase domain UP17_07535 PF03793 PASTA domain UP17_07540 PF16745 RsgA N-terminal domain UP17_07540 PF03193 RsgA GTPase UP17_07545 PF00834 Ribulose-phosphate 3 epimerase family UP17_07550 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain UP17_07550 PF04263 Thiamin pyrophosphokinase, catalytic domain UP17_07555 PF08183 Stage V sporulation protein family UP17_07560 PF00830 Ribosomal L28 family UP17_07565 PF03780 Asp23 family, cell envelope-related function UP17_07570 PF02734 DAK2 domain UP17_07570 PF13684 Dihydroxyacetone kinase family UP17_07575 PF03315 Serine dehydratase beta chain UP17_07575 PF01842 ACT domain UP17_07580 PF03313 Serine dehydratase alpha chain UP17_07585 PF00271 Helicase conserved C-terminal domain UP17_07585 PF00270 DEAD/DEAH box helicase UP17_07585 PF17191 RecG wedge domain UP17_07590 PF08279 HTH domain UP17_07590 PF01575 MaoC like domain UP17_07595 PF02504 Fatty acid synthesis protein UP17_07600 PF00698 Acyl transferase domain UP17_07610 PF00550 Phosphopantetheine attachment site UP17_07615 PF14622 Ribonuclease-III-like UP17_07615 PF00035 Double-stranded RNA binding motif UP17_07620 PF02463 RecF/RecN/SMC N terminal domain UP17_07620 PF06470 SMC proteins Flexible Hinge Domain UP17_07625 PF00448 SRP54-type protein, GTPase domain UP17_07625 PF02881 SRP54-type protein, helical bundle domain UP17_07630 PF04297 Putative helix-turn-helix protein, YlxM / p13 like UP17_07635 PF02978 Signal peptide binding domain UP17_07635 PF00448 SRP54-type protein, GTPase domain UP17_07635 PF02881 SRP54-type protein, helical bundle domain UP17_07640 PF00886 Ribosomal protein S16 UP17_07655 PF05239 PRC-barrel domain UP17_07655 PF01782 RimM N-terminal domain UP17_07660 PF01746 tRNA (Guanine-1)-methyltransferase UP17_07665 PF01245 Ribosomal protein L19 UP17_07670 PF10502 Signal peptidase, peptidase S26 UP17_07675 PF01926 50S ribosome-binding GTPase UP17_07680 PF01351 Ribonuclease HII UP17_07705 PF01312 FlhB HrpN YscU SpaS Family UP17_07710 PF08442 ATP-grasp domain UP17_07710 PF00549 CoA-ligase UP17_07715 PF02629 CoA binding domain UP17_07715 PF00549 CoA-ligase UP17_07720 PF02481 DNA recombination-mediator protein A UP17_07725 PF01396 Topoisomerase DNA binding C4 zinc finger UP17_07725 PF01751 Toprim domain UP17_07725 PF01131 DNA topoisomerase UP17_07730 PF01134 Glucose inhibited division protein A UP17_07735 PF00589 Phage integrase family UP17_07735 PF02899 Phage integrase, N-terminal SAM-like domain UP17_07740 PF00227 Proteasome subunit UP17_07745 PF10431 C-terminal, D2-small domain, of ClpB protein UP17_07745 PF00004 ATPase family associated with various cellular activities (AAA) UP17_07745 PF07724 AAA domain (Cdc48 subfamily) UP17_07750 PF06018 CodY GAF-like domain UP17_07750 PF08222 CodY helix-turn-helix domain UP17_07755 PF00460 Flagella basal body rod protein UP17_07760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP17_07760 PF00460 Flagella basal body rod protein UP17_07765 PF02049 Flagellar hook-basal body complex protein FliE UP17_07770 PF01514 Secretory protein of YscJ/FliF family UP17_07770 PF08345 Flagellar M-ring protein C-terminal UP17_07775 PF01706 FliG C-terminal domain UP17_07775 PF14842 FliG N-terminal domain UP17_07775 PF14841 FliG middle domain UP17_07780 PF02108 Flagellar assembly protein FliH UP17_07785 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP17_07785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP17_07785 PF18269 T3SS EscN ATPase C-terminal domain UP17_07790 PF02050 Flagellar FliJ protein UP17_07805 PF03963 Flagellar hook capping protein - N-terminal region UP17_07815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP17_07815 PF00460 Flagella basal body rod protein UP17_07815 PF07559 Flagellar basal body protein FlaE UP17_07820 PF06289 Flagellar and Swarming motility proteins UP17_07830 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UP17_07830 PF02154 Flagellar motor switch protein FliM UP17_07835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term UP17_07835 PF04509 CheC-like family UP17_07840 PF00072 Response regulator receiver domain UP17_07845 PF04347 Flagellar biosynthesis protein, FliO UP17_07850 PF00813 FliP family UP17_07855 PF01313 Bacterial export proteins, family 3 UP17_07860 PF01311 Bacterial export proteins, family 1 UP17_07865 PF01312 FlhB HrpN YscU SpaS Family UP17_07870 PF00771 FHIPEP family UP17_07875 PF00448 SRP54-type protein, GTPase domain UP17_07880 PF10609 NUBPL iron-transfer P-loop NTPase UP17_07885 PF01339 CheB methylesterase UP17_07885 PF00072 Response regulator receiver domain UP17_07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_07890 PF02895 Signal transducing histidine kinase, homodimeric domain UP17_07890 PF01584 CheW-like domain UP17_07890 PF01627 Hpt domain UP17_07890 PF07194 P2 response regulator binding domain UP17_07895 PF01584 CheW-like domain UP17_07900 PF04509 CheC-like family UP17_07905 PF03975 CheD chemotactic sensory transduction UP17_07910 PF04539 Sigma-70 region 3 UP17_07910 PF04545 Sigma-70, region 4 UP17_07910 PF04542 Sigma-70 region 2 UP17_07925 PF00318 Ribosomal protein S2 UP17_07930 PF00889 Elongation factor TS UP17_07935 PF00696 Amino acid kinase family UP17_07940 PF01765 Ribosome recycling factor UP17_07945 PF01255 Putative undecaprenyl diphosphate synthase UP17_07955 PF13288 DXP reductoisomerase C-terminal domain UP17_07955 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase UP17_07955 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain UP17_07960 PF02163 Peptidase family M50 UP17_07960 PF13180 PDZ domain UP17_07965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP17_07965 PF04073 Aminoacyl-tRNA editing domain UP17_07965 PF03129 Anticodon binding domain UP17_07970 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UP17_07970 PF07733 Bacterial DNA polymerase III alpha NTPase domain UP17_07970 PF14480 DNA polymerase III polC-type N-terminus I UP17_07970 PF00929 Exonuclease UP17_07970 PF02811 PHP domain UP17_07970 PF11490 DNA polymerase III polC-type N-terminus II UP17_07970 PF14579 Helix-hairpin-helix motif UP17_07975 PF02576 RimP N-terminal domain UP17_07975 PF17384 RimP C-terminal SH3 domain UP17_07980 PF00575 S1 RNA binding domain UP17_07980 PF13184 NusA-like KH domain UP17_07980 PF08529 NusA N-terminal domain UP17_07985 PF04296 Protein of unknown function (DUF448) UP17_07990 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family UP17_07995 PF04760 Translation initiation factor IF-2, N-terminal region UP17_07995 PF11987 Translation-initiation factor 2 UP17_07995 PF00009 Elongation factor Tu GTP binding domain UP17_08000 PF04456 Protein of unknown function (DUF503) UP17_08005 PF02033 Ribosome-binding factor A UP17_08010 PF01509 TruB family pseudouridylate synthase (N terminal domain) UP17_08010 PF16198 tRNA pseudouridylate synthase B C-terminal domain UP17_08015 PF01687 Riboflavin kinase UP17_08015 PF06574 FAD synthetase UP17_08020 PF00312 Ribosomal protein S15 UP17_08025 PF00575 S1 RNA binding domain UP17_08025 PF03725 3' exoribonuclease family, domain 2 UP17_08025 PF00013 KH domain UP17_08025 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain UP17_08025 PF01138 3' exoribonuclease family, domain 1 UP17_08035 PF01522 Polysaccharide deacetylase UP17_08040 PF05193 Peptidase M16 inactive domain UP17_08040 PF00675 Insulinase (Peptidase family M16) UP17_08045 PF05239 PRC-barrel domain UP17_08050 PF16924 Dipicolinate synthase subunit A N-terminal domain UP17_08050 PF01262 Alanine dehydrogenase/PNT, C-terminal domain UP17_08055 PF02441 Flavoprotein UP17_08060 PF02774 Semialdehyde dehydrogenase, dimerisation domain UP17_08060 PF01118 Semialdehyde dehydrogenase, NAD binding domain UP17_08065 PF13840 ACT domain UP17_08065 PF00696 Amino acid kinase family UP17_08070 PF00701 Dihydrodipicolinate synthetase family UP17_08075 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UP17_08075 PF17770 Ribonuclease J C-terminal domain UP17_08075 PF00753 Metallo-beta-lactamase superfamily UP17_08080 PF00574 Clp protease UP17_08090 PF09397 Ftsk gamma domain UP17_08090 PF17854 FtsK alpha domain UP17_08090 PF01580 FtsK/SpoIIIE family UP17_08100 PF07702 UTRA domain UP17_08100 PF00392 Bacterial regulatory proteins, gntR family UP17_08125 PF05193 Peptidase M16 inactive domain UP17_08130 PF05193 Peptidase M16 inactive domain UP17_08130 PF00675 Insulinase (Peptidase family M16) UP17_08140 PF11588 Protein of unknown function (DUF3243) UP17_08145 PF11868 Protein of unknown function (DUF3388) UP17_08150 PF13464 Domain of unknown function (DUF4115) UP17_08155 PF01066 CDP-alcohol phosphatidyltransferase UP17_08160 PF00994 Probable molybdopterin binding domain UP17_08160 PF18146 Damage-inducible protein CinA KH domain UP17_08160 PF02464 Competence-damaged protein UP17_08170 PF00154 recA bacterial DNA recombination protein UP17_08175 PF01966 HD domain UP17_08175 PF12072 Domain of unknown function (DUF3552) UP17_08175 PF00013 KH domain UP17_08180 PF13277 YmdB-like protein UP17_08185 PF04232 Stage V sporulation protein S (SpoVS) UP17_08195 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg UP17_08195 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II UP17_08195 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase UP17_08200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP17_08210 PF08240 Alcohol dehydrogenase GroES-like domain UP17_08210 PF00107 Zinc-binding dehydrogenase UP17_08215 PF00919 Uncharacterized protein family UPF0004 UP17_08215 PF01938 TRAM domain UP17_08215 PF04055 Radical SAM superfamily UP17_08220 PF06133 Control of competence regulator ComK, YlbF/YmcA UP17_08235 PF10628 Outer spore coat protein E (CotE) UP17_08240 PF00488 MutS domain V UP17_08240 PF05190 MutS family domain IV UP17_08240 PF05192 MutS domain III UP17_08240 PF05188 MutS domain II UP17_08240 PF01624 MutS domain I UP17_08245 PF08676 MutL C terminal dimerisation domain UP17_08245 PF01119 DNA mismatch repair protein, C-terminal domain UP17_08255 PF03169 OPT oligopeptide transporter protein UP17_08270 PF00733 Asparagine synthase UP17_08270 PF13537 Glutamine amidotransferase domain UP17_08280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP17_08285 PF02378 Phosphotransferase system, EIIC UP17_08290 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP17_08295 PF11975 Family 4 glycosyl hydrolase C-terminal domain UP17_08295 PF02056 Family 4 glycosyl hydrolase UP17_08300 PF04794 YdjC-like protein UP17_08305 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_08310 PF07849 Protein of unknown function (DUF1641) UP17_08320 PF13333 Integrase core domain UP17_08320 PF00665 Integrase core domain UP17_08320 PF13276 HTH-like domain UP17_08330 PF00486 Transcriptional regulatory protein, C terminal UP17_08330 PF00072 Response regulator receiver domain UP17_08360 PF17209 Hfq protein UP17_08365 PF00004 ATPase family associated with various cellular activities (AAA) UP17_08365 PF17866 AAA lid domain UP17_08370 PF03458 UPF0126 domain UP17_08375 PF13167 GTP-binding GTPase N-terminal UP17_08375 PF01926 50S ribosome-binding GTPase UP17_08375 PF16360 GTP-binding GTPase Middle Region UP17_08380 PF06838 Methionine gamma-lyase UP17_08385 PF13411 MerR HTH family regulatory protein UP17_08390 PF03951 Glutamine synthetase, beta-Grasp domain UP17_08390 PF00120 Glutamine synthetase, catalytic domain UP17_08400 PF00589 Phage integrase family UP17_08400 PF02899 Phage integrase, N-terminal SAM-like domain UP17_08440 PF01348 Type II intron maturase UP17_08440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_08450 PF04542 Sigma-70 region 2 UP17_08450 PF08281 Sigma-70, region 4 UP17_08460 PF01546 Peptidase family M20/M25/M40 UP17_08460 PF07687 Peptidase dimerisation domain UP17_08470 PF00005 ABC transporter UP17_08485 PF00005 ABC transporter UP17_08490 PF02687 FtsX-like permease family UP17_08495 PF00486 Transcriptional regulatory protein, C terminal UP17_08495 PF00072 Response regulator receiver domain UP17_08500 PF00672 HAMP domain UP17_08500 PF00512 His Kinase A (phospho-acceptor) domain UP17_08500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_08500 PF13426 PAS domain UP17_08515 PF00356 Bacterial regulatory proteins, lacI family UP17_08515 PF13407 Periplasmic binding protein domain UP17_08520 PF02378 Phosphotransferase system, EIIC UP17_08520 PF00367 phosphotransferase system, EIIB UP17_08525 PF00251 Glycosyl hydrolases family 32 N-terminal domain UP17_08525 PF08244 Glycosyl hydrolases family 32 C terminal UP17_08530 PF00294 pfkB family carbohydrate kinase UP17_08535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP17_08550 PF07883 Cupin domain UP17_08560 PF04239 Protein of unknown function (DUF421) UP17_08570 PF13333 Integrase core domain UP17_08570 PF13276 HTH-like domain UP17_08570 PF00665 Integrase core domain UP17_08625 PF13276 HTH-like domain UP17_08625 PF13333 Integrase core domain UP17_08625 PF00665 Integrase core domain UP17_08660 PF01565 FAD binding domain UP17_08660 PF08031 Berberine and berberine like UP17_08665 PF13333 Integrase core domain UP17_08665 PF00665 Integrase core domain UP17_08665 PF13276 HTH-like domain UP17_08670 PF01527 Transposase UP17_08695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain UP17_08695 PF00391 PEP-utilising enzyme, mobile domain UP17_08710 PF01979 Amidohydrolase family UP17_08730 PF00857 Isochorismatase family UP17_08735 PF03358 NADPH-dependent FMN reductase UP17_08740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_08745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_08750 PF01738 Dienelactone hydrolase family UP17_08755 PF00561 alpha/beta hydrolase fold UP17_08775 PF13732 Domain of unknown function (DUF4162) UP17_08775 PF00005 ABC transporter UP17_08785 PF01447 Thermolysin metallopeptidase, catalytic domain UP17_08785 PF07504 Fungalysin/Thermolysin Propeptide Motif UP17_08785 PF02868 Thermolysin metallopeptidase, alpha-helical domain UP17_08785 PF03413 Peptidase propeptide and YPEB domain UP17_08790 PF05525 Branched-chain amino acid transport protein UP17_08795 PF01494 FAD binding domain UP17_08800 PF08281 Sigma-70, region 4 UP17_08800 PF04542 Sigma-70 region 2 UP17_08820 PF01638 HxlR-like helix-turn-helix UP17_08835 PF13673 Acetyltransferase (GNAT) domain UP17_08835 PF04229 GrpB protein UP17_08865 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP17_08865 PF13378 Enolase C-terminal domain-like UP17_08880 PF04203 Sortase domain UP17_08905 PF07690 Major Facilitator Superfamily UP17_08915 PF13520 Amino acid permease UP17_08925 PF00294 pfkB family carbohydrate kinase UP17_08930 PF00392 Bacterial regulatory proteins, gntR family UP17_08930 PF07702 UTRA domain UP17_08935 PF05163 DinB family UP17_08945 PF01741 Large-conductance mechanosensitive channel, MscL UP17_08975 PF00665 Integrase core domain UP17_08975 PF13333 Integrase core domain UP17_08975 PF13276 HTH-like domain UP17_08985 PF08141 Small acid-soluble spore protein H family UP17_08990 PF17763 Glutaminase/Asparaginase C-terminal domain UP17_08990 PF00710 Asparaginase, N-terminal UP17_08995 PF01235 Sodium:alanine symporter family UP17_09000 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_09010 PF03741 Integral membrane protein TerC family UP17_09015 PF00857 Isochorismatase family UP17_09030 PF00067 Cytochrome P450 UP17_09045 PF00892 EamA-like transporter family UP17_09055 PF00149 Calcineurin-like phosphoesterase UP17_09060 PF13302 Acetyltransferase (GNAT) domain UP17_09075 PF03992 Antibiotic biosynthesis monooxygenase UP17_09100 PF00512 His Kinase A (phospho-acceptor) domain UP17_09100 PF00672 HAMP domain UP17_09105 PF01545 Cation efflux family UP17_09105 PF16916 Dimerisation domain of Zinc Transporter UP17_09115 PF13411 MerR HTH family regulatory protein UP17_09115 PF06445 GyrI-like small molecule binding domain UP17_09130 PF00465 Iron-containing alcohol dehydrogenase UP17_09140 PF00491 Arginase family UP17_09150 PF00248 Aldo/keto reductase family UP17_09155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_09170 PF03606 C4-dicarboxylate anaerobic carrier UP17_09175 PF07687 Peptidase dimerisation domain UP17_09175 PF01546 Peptidase family M20/M25/M40 UP17_09195 PF13419 Haloacid dehalogenase-like hydrolase UP17_09200 PF08713 DNA alkylation repair enzyme UP17_09215 PF02378 Phosphotransferase system, EIIC UP17_09215 PF00367 phosphotransferase system, EIIB UP17_09220 PF16657 Maltogenic Amylase, C-terminal domain UP17_09220 PF00128 Alpha amylase, catalytic domain UP17_09225 PF00392 Bacterial regulatory proteins, gntR family UP17_09225 PF07702 UTRA domain UP17_09230 PF00893 Small Multidrug Resistance protein UP17_09235 PF00893 Small Multidrug Resistance protein UP17_09255 PF01520 N-acetylmuramoyl-L-alanine amidase UP17_09255 PF05036 Sporulation related domain UP17_09290 PF00717 Peptidase S24-like UP17_09290 PF01726 LexA DNA binding domain UP17_09300 PF00239 Resolvase, N terminal domain UP17_09305 PF05979 Bacterial protein of unknown function (DUF896) UP17_09310 PF02780 Transketolase, C-terminal domain UP17_09310 PF00456 Transketolase, thiamine diphosphate binding domain UP17_09310 PF02779 Transketolase, pyrimidine binding domain UP17_09315 PF10747 Sporulation inhibitor of replication protein SirA UP17_09345 PF07875 Coat F domain UP17_09360 PF00085 Thioredoxin UP17_09365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP17_09370 PF07681 DoxX UP17_09375 PF02683 Cytochrome C biogenesis protein transmembrane region UP17_09385 PF07301 Protein of unknown function (DUF1453) UP17_09395 PF11084 Protein of unknown function (DUF2621) UP17_09400 PF12320 Type 5 capsule protein repressor C-terminal domain UP17_09400 PF00149 Calcineurin-like phosphoesterase UP17_09405 PF13476 AAA domain UP17_09425 PF00171 Aldehyde dehydrogenase family UP17_09430 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP17_09430 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP17_09430 PF00205 Thiamine pyrophosphate enzyme, central domain UP17_09435 PF01645 Conserved region in glutamate synthase UP17_09440 PF04960 Glutaminase UP17_09450 PF00392 Bacterial regulatory proteins, gntR family UP17_09450 PF07729 FCD domain UP17_09460 PF01842 ACT domain UP17_09460 PF03447 Homoserine dehydrogenase, NAD binding domain UP17_09460 PF00742 Homoserine dehydrogenase UP17_09465 PF00171 Aldehyde dehydrogenase family UP17_09470 PF00324 Amino acid permease UP17_09490 PF00324 Amino acid permease UP17_09500 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP17_09500 PF13378 Enolase C-terminal domain-like UP17_09510 PF13474 SnoaL-like domain UP17_09515 PF00326 Prolyl oligopeptidase family UP17_09535 PF02583 Metal-sensitive transcriptional repressor UP17_09545 PF13686 DsrE/DsrF/DrsH-like family UP17_09555 PF00581 Rhodanese-like domain UP17_09560 PF00581 Rhodanese-like domain UP17_09560 PF01206 Sulfurtransferase TusA UP17_09570 PF00581 Rhodanese-like domain UP17_09570 PF00753 Metallo-beta-lactamase superfamily UP17_09575 PF01206 Sulfurtransferase TusA UP17_09580 PF01925 Sulfite exporter TauE/SafE UP17_09595 PF10752 Protein of unknown function (DUF2533) UP17_09630 PF00925 GTP cyclohydrolase II UP17_09640 PF00005 ABC transporter UP17_09640 PF13732 Domain of unknown function (DUF4162) UP17_09660 PF02583 Metal-sensitive transcriptional repressor UP17_09665 PF00403 Heavy-metal-associated domain UP17_09670 PF00403 Heavy-metal-associated domain UP17_09675 PF05163 DinB family UP17_09685 PF01734 Patatin-like phospholipase UP17_09705 PF16655 PhoD-like phosphatase, N-terminal domain UP17_09705 PF09423 PhoD-like phosphatase UP17_09710 PF02416 mttA/Hcf106 family UP17_09715 PF00902 Sec-independent protein translocase protein (TatC) UP17_09725 PF00324 Amino acid permease UP17_09740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP17_09740 PF00205 Thiamine pyrophosphate enzyme, central domain UP17_09740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP17_09745 PF00202 Aminotransferase class-III UP17_09750 PF02585 GlcNAc-PI de-N-acetylase UP17_09755 PF03601 Conserved hypothetical protein 698 UP17_09760 PF00392 Bacterial regulatory proteins, gntR family UP17_09760 PF07840 FadR C-terminal domain UP17_09770 PF05139 Erythromycin esterase UP17_09770 PF00156 Phosphoribosyl transferase domain UP17_09775 PF13673 Acetyltransferase (GNAT) domain UP17_09780 PF01047 MarR family UP17_09785 PF00664 ABC transporter transmembrane region UP17_09785 PF00005 ABC transporter UP17_09790 PF00005 ABC transporter UP17_09790 PF00664 ABC transporter transmembrane region UP17_09795 PF01047 MarR family UP17_09800 PF00676 Dehydrogenase E1 component UP17_09805 PF02780 Transketolase, C-terminal domain UP17_09805 PF02779 Transketolase, pyrimidine binding domain UP17_09815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_09830 PF00155 Aminotransferase class I and II UP17_09830 PF00392 Bacterial regulatory proteins, gntR family UP17_09835 PF00892 EamA-like transporter family UP17_09845 PF07690 Major Facilitator Superfamily UP17_09850 PF01565 FAD binding domain UP17_09855 PF17934 Tetracyclin repressor-like, C-terminal domain UP17_09855 PF00440 Bacterial regulatory proteins, tetR family UP17_09860 PF07690 Major Facilitator Superfamily UP17_09870 PF17391 Urocanase N-terminal domain UP17_09870 PF17392 Urocanase C-terminal domain UP17_09870 PF01175 Urocanase Rossmann-like domain UP17_09880 PF07690 Major Facilitator Superfamily UP17_09890 PF01266 FAD dependent oxidoreductase UP17_09895 PF03746 LamB/YcsF family UP17_09900 PF01566 Natural resistance-associated macrophage protein UP17_09905 PF07286 Protein of unknown function (DUF1445) UP17_09910 PF02682 Carboxyltransferase domain, subdomain C and D UP17_09915 PF02626 Carboxyltransferase domain, subdomain A and B UP17_09925 PF00384 Molybdopterin oxidoreductase UP17_09925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UP17_09925 PF01568 Molydopterin dinucleotide binding domain UP17_09955 PF07690 Major Facilitator Superfamily UP17_09965 PF00072 Response regulator receiver domain UP17_09965 PF00196 Bacterial regulatory proteins, luxR family UP17_09975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_09975 PF07730 Histidine kinase UP17_09980 PF01614 Bacterial transcriptional regulator UP17_09980 PF09339 IclR helix-turn-helix domain UP17_09985 PF01113 Dihydrodipicolinate reductase, N-terminus UP17_09995 PF01810 LysE type translocator UP17_10000 PF01978 Sugar-specific transcriptional regulator TrmB UP17_10000 PF11495 Archaeal transcriptional regulator TrmB UP17_10010 PF01497 Periplasmic binding protein UP17_10015 PF01032 FecCD transport family UP17_10020 PF01032 FecCD transport family UP17_10035 PF16868 NMT1-like family UP17_10055 PF03466 LysR substrate binding domain UP17_10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_10060 PF00491 Arginase family UP17_10065 PF03616 Sodium/glutamate symporter UP17_10070 PF02586 SOS response associated peptidase (SRAP) UP17_10085 PF07690 Major Facilitator Superfamily UP17_10100 PF02525 Flavodoxin-like fold UP17_10115 PF01047 MarR family UP17_10130 PF03601 Conserved hypothetical protein 698 UP17_10135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_10135 PF03466 LysR substrate binding domain UP17_10145 PF13333 Integrase core domain UP17_10145 PF13276 HTH-like domain UP17_10145 PF00665 Integrase core domain UP17_10150 PF00501 AMP-binding enzyme UP17_10150 PF13193 AMP-binding enzyme C-terminal domain UP17_10160 PF07690 Major Facilitator Superfamily UP17_10170 PF07859 alpha/beta hydrolase fold UP17_10185 PF07690 Major Facilitator Superfamily UP17_10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_10195 PF03466 LysR substrate binding domain UP17_10210 PF00106 short chain dehydrogenase UP17_10215 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_10215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_10215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_10225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP17_10225 PF02785 Biotin carboxylase C-terminal domain UP17_10225 PF00289 Biotin carboxylase, N-terminal domain UP17_10230 PF00364 Biotin-requiring enzyme UP17_10235 PF01039 Carboxyl transferase domain UP17_10240 PF01642 Methylmalonyl-CoA mutase UP17_10245 PF01642 Methylmalonyl-CoA mutase UP17_10245 PF02310 B12 binding domain UP17_10265 PF02225 PA domain UP17_10265 PF05922 Peptidase inhibitor I9 UP17_10265 PF00082 Subtilase family UP17_10265 PF13860 FlgD Ig-like domain UP17_10280 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_10285 PF03845 Spore germination protein UP17_10310 PF00528 Binding-protein-dependent transport system inner membrane component UP17_10320 PF00455 DeoR C terminal sensor domain UP17_10320 PF08220 DeoR-like helix-turn-helix domain UP17_10330 PF00893 Small Multidrug Resistance protein UP17_10335 PF00893 Small Multidrug Resistance protein UP17_10365 PF01235 Sodium:alanine symporter family UP17_10370 PF13217 Protein of unknown function (DUF4025) UP17_10375 PF00005 ABC transporter UP17_10380 PF02361 Cobalt transport protein UP17_10385 PF02553 Cobalt transport protein component CbiN UP17_10390 PF01891 Cobalt uptake substrate-specific transmembrane region UP17_10400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_10400 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UP17_10405 PF01903 CbiX UP17_10410 PF02571 Precorrin-6x reductase CbiJ/CobK UP17_10415 PF02570 Precorrin-8X methylmutase UP17_10420 PF01888 CbiD UP17_10425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_10430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_10435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_10440 PF01890 Cobalamin synthesis G C-terminus UP17_10440 PF11761 Cobalamin biosynthesis central region UP17_10440 PF11760 Cobalamin synthesis G N-terminal UP17_10445 PF07685 CobB/CobQ-like glutamine amidotransferase domain UP17_10445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UP17_10460 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP UP17_10465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UP17_10465 PF07685 CobB/CobQ-like glutamine amidotransferase domain UP17_10470 PF00216 Bacterial DNA-binding protein UP17_10475 PF00069 Protein kinase domain UP17_10485 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal UP17_10485 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal UP17_10495 PF06052 3-hydroxyanthranilic acid dioxygenase UP17_10510 PF00171 Aldehyde dehydrogenase family UP17_10515 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_10520 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation UP17_10520 PF01118 Semialdehyde dehydrogenase, NAD binding domain UP17_10525 PF00682 HMGL-like UP17_10525 PF07836 DmpG-like communication domain UP17_10530 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_10535 PF07690 Major Facilitator Superfamily UP17_10545 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_10545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP17_10550 PF00440 Bacterial regulatory proteins, tetR family UP17_10555 PF00561 alpha/beta hydrolase fold UP17_10560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP17_10560 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_10565 PF00106 short chain dehydrogenase UP17_10570 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_10570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP17_10575 PF03070 TENA/THI-4/PQQC family UP17_10580 PF09819 ABC-type cobalt transport system, permease component UP17_10590 PF02361 Cobalt transport protein UP17_10595 PF02581 Thiamine monophosphate synthase UP17_10600 PF01266 FAD dependent oxidoreductase UP17_10605 PF05690 Thiazole biosynthesis protein ThiG UP17_10605 PF02597 ThiS family UP17_10610 PF05690 Thiazole biosynthesis protein ThiG UP17_10615 PF00899 ThiF family UP17_10630 PF00330 Aconitase family (aconitate hydratase) UP17_10630 PF00694 Aconitase C-terminal domain UP17_10635 PF00578 AhpC/TSA family UP17_10640 PF08177 Small acid-soluble spore protein N family UP17_10650 PF03061 Thioesterase superfamily UP17_10660 PF01521 Iron-sulphur cluster biosynthesis UP17_10670 PF02660 Glycerol-3-phosphate acyltransferase UP17_10675 PF13380 CoA binding domain UP17_10680 PF00986 DNA gyrase B subunit, carboxyl terminus UP17_10680 PF01751 Toprim domain UP17_10680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_10680 PF00204 DNA gyrase B UP17_10685 PF03989 DNA gyrase C-terminal domain, beta-propeller UP17_10685 PF00521 DNA gyrase/topoisomerase IV, subunit A UP17_10690 PF01380 SIS domain UP17_10695 PF01418 Helix-turn-helix domain, rpiR family UP17_10695 PF01380 SIS domain UP17_10700 PF00367 phosphotransferase system, EIIB UP17_10700 PF02378 Phosphotransferase system, EIIC UP17_10715 PF07075 Protein of unknown function (DUF1343) UP17_10720 PF00367 phosphotransferase system, EIIB UP17_10720 PF02378 Phosphotransferase system, EIIC UP17_10730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold UP17_10730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain UP17_10765 PF00072 Response regulator receiver domain UP17_10765 PF04397 LytTr DNA-binding domain UP17_10775 PF17203 Single cache domain 3 UP17_10775 PF00989 PAS fold UP17_10775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_10775 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP17_10790 PF00107 Zinc-binding dehydrogenase UP17_10790 PF08240 Alcohol dehydrogenase GroES-like domain UP17_10795 PF07690 Major Facilitator Superfamily UP17_10820 PF13276 HTH-like domain UP17_10820 PF00665 Integrase core domain UP17_10820 PF13333 Integrase core domain UP17_10830 PF00753 Metallo-beta-lactamase superfamily UP17_10840 PF07739 TipAS antibiotic-recognition domain UP17_10840 PF13411 MerR HTH family regulatory protein UP17_10845 PF07690 Major Facilitator Superfamily UP17_10855 PF01979 Amidohydrolase family UP17_10860 PF03841 L-seryl-tRNA selenium transferase UP17_10865 PF07071 KDGP aldolase UP17_10880 PF02447 GntP family permease UP17_10890 PF07690 Major Facilitator Superfamily UP17_10895 PF12697 Alpha/beta hydrolase family UP17_10900 PF01614 Bacterial transcriptional regulator UP17_10900 PF09339 IclR helix-turn-helix domain UP17_10910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_10920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP17_10920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP17_10920 PF00205 Thiamine pyrophosphate enzyme, central domain UP17_10925 PF00171 Aldehyde dehydrogenase family UP17_10930 PF01958 Domain of unknown function DUF108 UP17_10930 PF03447 Homoserine dehydrogenase, NAD binding domain UP17_10935 PF00848 Ring hydroxylating alpha subunit (catalytic domain) UP17_10935 PF00355 Rieske [2Fe-2S] domain UP17_10945 PF00106 short chain dehydrogenase UP17_10955 PF02416 mttA/Hcf106 family UP17_10980 PF00144 Beta-lactamase UP17_10990 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase UP17_10995 PF13333 Integrase core domain UP17_10995 PF00665 Integrase core domain UP17_11010 PF00501 AMP-binding enzyme UP17_11010 PF00550 Phosphopantetheine attachment site UP17_11010 PF00668 Condensation domain UP17_11010 PF13193 AMP-binding enzyme C-terminal domain UP17_11015 PF00668 Condensation domain UP17_11015 PF13193 AMP-binding enzyme C-terminal domain UP17_11015 PF00550 Phosphopantetheine attachment site UP17_11015 PF07993 Male sterility protein UP17_11015 PF00501 AMP-binding enzyme UP17_11020 PF00550 Phosphopantetheine attachment site UP17_11020 PF00668 Condensation domain UP17_11020 PF13193 AMP-binding enzyme C-terminal domain UP17_11020 PF00501 AMP-binding enzyme UP17_11030 PF03239 Iron permease FTR1 family UP17_11040 PF03466 LysR substrate binding domain UP17_11040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_11045 PF00175 Oxidoreductase NAD-binding domain UP17_11045 PF00258 Flavodoxin UP17_11045 PF00667 FAD binding domain UP17_11050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UP17_11050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UP17_11060 PF03845 Spore germination protein UP17_11065 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_11070 PF05504 Spore germination B3/ GerAC like, C-terminal UP17_11075 PF01593 Flavin containing amine oxidoreductase UP17_11085 PF00440 Bacterial regulatory proteins, tetR family UP17_11090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_11090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_11090 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_11095 PF00501 AMP-binding enzyme UP17_11095 PF13193 AMP-binding enzyme C-terminal domain UP17_11100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP17_11100 PF00289 Biotin carboxylase, N-terminal domain UP17_11100 PF02785 Biotin carboxylase C-terminal domain UP17_11105 PF00364 Biotin-requiring enzyme UP17_11110 PF00682 HMGL-like UP17_11115 PF00378 Enoyl-CoA hydratase/isomerase UP17_11120 PF01039 Carboxyl transferase domain UP17_11130 PF00857 Isochorismatase family UP17_11135 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain UP17_11135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family UP17_11135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain UP17_11140 PF02540 NAD synthase UP17_11145 PF00144 Beta-lactamase UP17_11235 PF13276 HTH-like domain UP17_11235 PF00665 Integrase core domain UP17_11235 PF13333 Integrase core domain UP17_11240 PF03600 Citrate transporter UP17_11250 PF03466 LysR substrate binding domain UP17_11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_11255 PF14537 Cytochrome c3 UP17_11255 PF00890 FAD binding domain UP17_11260 PF04303 PrpF protein UP17_11265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_11265 PF03466 LysR substrate binding domain UP17_11270 PF03600 Citrate transporter UP17_11275 PF06866 Protein of unknown function (DUF1256) UP17_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_11285 PF03466 LysR substrate binding domain UP17_11325 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_11330 PF00005 ABC transporter UP17_11335 PF00144 Beta-lactamase UP17_11340 PF00665 Integrase core domain UP17_11340 PF13276 HTH-like domain UP17_11340 PF13333 Integrase core domain UP17_11355 PF00583 Acetyltransferase (GNAT) family UP17_11380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_11410 PF01471 Putative peptidoglycan binding domain UP17_11410 PF07486 Cell Wall Hydrolase UP17_11435 PF00106 short chain dehydrogenase UP17_11435 PF00561 alpha/beta hydrolase fold UP17_11440 PF01638 HxlR-like helix-turn-helix UP17_11445 PF00881 Nitroreductase family UP17_11460 PF05163 DinB family UP17_11480 PF01037 Lrp/AsnC ligand binding domain UP17_11490 PF00132 Bacterial transferase hexapeptide (six repeats) UP17_11530 PF08543 Phosphomethylpyrimidine kinase UP17_11550 PF13039 Protein of unknown function (DUF3900) UP17_11550 PF13037 Domain of unknown function (DUF3898) UP17_11560 PF02416 mttA/Hcf106 family UP17_11565 PF07690 Major Facilitator Superfamily UP17_11575 PF02694 Uncharacterised BCR, YnfA/UPF0060 family UP17_11580 PF00892 EamA-like transporter family UP17_11585 PF12706 Beta-lactamase superfamily domain UP17_11590 PF14171 Toxin SpoIISA, type II toxin-antitoxin system UP17_11600 PF00563 EAL domain UP17_11600 PF00990 Diguanylate cyclase, GGDEF domain UP17_11600 PF03707 Bacterial signalling protein N terminal repeat UP17_11650 PF01943 Polysaccharide biosynthesis protein UP17_11660 PF00324 Amino acid permease UP17_11665 PF00491 Arginase family UP17_11685 PF07969 Amidohydrolase family UP17_11690 PF01546 Peptidase family M20/M25/M40 UP17_11690 PF07687 Peptidase dimerisation domain UP17_11695 PF11755 Protein of unknown function (DUF3311) UP17_11700 PF00474 Sodium:solute symporter family UP17_11725 PF13378 Enolase C-terminal domain-like UP17_11725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP17_11730 PF00877 NlpC/P60 family UP17_11730 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain UP17_11735 PF00326 Prolyl oligopeptidase family UP17_11740 PF03781 Sulfatase-modifying factor enzyme 1 UP17_11765 PF05163 DinB family UP17_11780 PF10372 Bacterial membrane-spanning protein N-terminus UP17_11780 PF02457 DisA bacterial checkpoint controller nucleotide-binding UP17_11785 PF00557 Metallopeptidase family M24 UP17_11790 PF00665 Integrase core domain UP17_11790 PF13276 HTH-like domain UP17_11790 PF13333 Integrase core domain UP17_11795 PF01527 Transposase UP17_11810 PF00665 Integrase core domain UP17_11810 PF13333 Integrase core domain UP17_11810 PF13276 HTH-like domain UP17_11820 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UP17_11820 PF01926 50S ribosome-binding GTPase UP17_11825 PF08028 Acyl-CoA dehydrogenase, C-terminal domain UP17_11825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_11825 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_11830 PF00512 His Kinase A (phospho-acceptor) domain UP17_11830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_11835 PF00501 AMP-binding enzyme UP17_11835 PF13193 AMP-binding enzyme C-terminal domain UP17_11840 PF07687 Peptidase dimerisation domain UP17_11840 PF01546 Peptidase family M20/M25/M40 UP17_11855 PF00324 Amino acid permease UP17_11865 PF00464 Serine hydroxymethyltransferase UP17_11870 PF08669 Glycine cleavage T-protein C-terminal barrel domain UP17_11870 PF01571 Aminomethyltransferase folate-binding domain UP17_11875 PF01597 Glycine cleavage H-protein UP17_11880 PF02347 Glycine cleavage system P-protein UP17_11885 PF02347 Glycine cleavage system P-protein UP17_11890 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family UP17_11890 PF04055 Radical SAM superfamily UP17_11900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP17_11900 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_11905 PF01842 ACT domain UP17_11905 PF00551 Formyl transferase UP17_11915 PF03315 Serine dehydratase beta chain UP17_11915 PF01842 ACT domain UP17_11920 PF03313 Serine dehydratase alpha chain UP17_11925 PF00676 Dehydrogenase E1 component UP17_11930 PF02780 Transketolase, C-terminal domain UP17_11930 PF02779 Transketolase, pyrimidine binding domain UP17_11935 PF00364 Biotin-requiring enzyme UP17_11935 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP17_11935 PF02817 e3 binding domain UP17_11940 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_11940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP17_11950 PF01590 GAF domain UP17_11950 PF00158 Sigma-54 interaction domain UP17_11950 PF02954 Bacterial regulatory protein, Fis family UP17_11960 PF04294 VanW like protein UP17_11970 PF09335 SNARE associated Golgi protein UP17_11975 PF01066 CDP-alcohol phosphatidyltransferase UP17_11980 PF09335 SNARE associated Golgi protein UP17_11990 PF00892 EamA-like transporter family UP17_11995 PF07729 FCD domain UP17_11995 PF00392 Bacterial regulatory proteins, gntR family UP17_12000 PF00398 Ribosomal RNA adenine dimethylase UP17_12015 PF00111 2Fe-2S iron-sulfur cluster binding domain UP17_12015 PF01799 [2Fe-2S] binding domain UP17_12025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UP17_12025 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UP17_12030 PF12804 MobA-like NTP transferase domain UP17_12035 PF13478 XdhC Rossmann domain UP17_12035 PF02625 XdhC and CoxI family UP17_12045 PF02754 Cysteine-rich domain UP17_12045 PF13183 4Fe-4S dicluster domain UP17_12050 PF02913 FAD linked oxidases, C-terminal domain UP17_12050 PF01565 FAD binding domain UP17_12060 PF00528 Binding-protein-dependent transport system inner membrane component UP17_12065 PF00528 Binding-protein-dependent transport system inner membrane component UP17_12075 PF13416 Bacterial extracellular solute-binding protein UP17_12085 PF02954 Bacterial regulatory protein, Fis family UP17_12085 PF00072 Response regulator receiver domain UP17_12085 PF00158 Sigma-54 interaction domain UP17_12090 PF00989 PAS fold UP17_12090 PF00512 His Kinase A (phospho-acceptor) domain UP17_12090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_12095 PF08818 Domain of unknown function (DU1801) UP17_12105 PF01022 Bacterial regulatory protein, arsR family UP17_12125 PF01373 Glycosyl hydrolase family 14 UP17_12125 PF00686 Starch binding domain UP17_12130 PF07690 Major Facilitator Superfamily UP17_12135 PF04308 Ribonuclease H-like UP17_12140 PF02875 Mur ligase family, glutamate ligase domain UP17_12140 PF01225 Mur ligase family, catalytic domain UP17_12140 PF08245 Mur ligase middle domain UP17_12150 PF00924 Mechanosensitive ion channel UP17_12175 PF02447 GntP family permease UP17_12180 PF02595 Glycerate kinase family UP17_12190 PF01266 FAD dependent oxidoreductase UP17_12210 PF08943 CsiD UP17_12220 PF01266 FAD dependent oxidoreductase UP17_12225 PF07729 FCD domain UP17_12225 PF00392 Bacterial regulatory proteins, gntR family UP17_12235 PF03069 Acetamidase/Formamidase family UP17_12240 PF12697 Alpha/beta hydrolase family UP17_12245 PF00440 Bacterial regulatory proteins, tetR family UP17_12245 PF13977 BetI-type transcriptional repressor, C-terminal UP17_12250 PF00589 Phage integrase family UP17_12255 PF03851 UV-endonuclease UvdE UP17_12260 PF01053 Cys/Met metabolism PLP-dependent enzyme UP17_12280 PF00005 ABC transporter UP17_12285 PF00392 Bacterial regulatory proteins, gntR family UP17_12305 PF10431 C-terminal, D2-small domain, of ClpB protein UP17_12305 PF07724 AAA domain (Cdc48 subfamily) UP17_12305 PF17871 AAA lid domain UP17_12305 PF00004 ATPase family associated with various cellular activities (AAA) UP17_12310 PF01476 LysM domain UP17_12310 PF00877 NlpC/P60 family UP17_12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_12330 PF03466 LysR substrate binding domain UP17_12335 PF03601 Conserved hypothetical protein 698 UP17_12340 PF02675 S-adenosylmethionine decarboxylase UP17_12345 PF00528 Binding-protein-dependent transport system inner membrane component UP17_12350 PF04069 Substrate binding domain of ABC-type glycine betaine transport system UP17_12355 PF00528 Binding-protein-dependent transport system inner membrane component UP17_12360 PF00571 CBS domain UP17_12360 PF00005 ABC transporter UP17_12365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_12365 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_12365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_12380 PF02424 ApbE family UP17_12390 PF00672 HAMP domain UP17_12390 PF00989 PAS fold UP17_12390 PF00512 His Kinase A (phospho-acceptor) domain UP17_12390 PF18698 Histidine kinase sensor domain UP17_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_12395 PF00486 Transcriptional regulatory protein, C terminal UP17_12395 PF00072 Response regulator receiver domain UP17_12415 PF00171 Aldehyde dehydrogenase family UP17_12420 PF00696 Amino acid kinase family UP17_12420 PF01472 PUA domain UP17_12425 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP17_12425 PF03807 NADP oxidoreductase coenzyme F420-dependent UP17_12455 PF02310 B12 binding domain UP17_12455 PF01642 Methylmalonyl-CoA mutase UP17_12460 PF01642 Methylmalonyl-CoA mutase UP17_12495 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase UP17_12525 PF05547 Immune inhibitor A peptidase M6 UP17_12525 PF00801 PKD domain UP17_12540 PF01734 Patatin-like phospholipase UP17_12550 PF00171 Aldehyde dehydrogenase family UP17_12555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase UP17_12555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP17_12565 PF00465 Iron-containing alcohol dehydrogenase UP17_12570 PF02954 Bacterial regulatory protein, Fis family UP17_12570 PF00989 PAS fold UP17_12570 PF00158 Sigma-54 interaction domain UP17_12585 PF02225 PA domain UP17_12585 PF04389 Peptidase family M28 UP17_12615 PF01569 PAP2 superfamily UP17_12640 PF05979 Bacterial protein of unknown function (DUF896) UP17_12665 PF00092 von Willebrand factor type A domain UP17_12685 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP17_12685 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP17_12685 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP17_12685 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP17_12690 PF00293 NUDIX domain UP17_12705 PF01370 NAD dependent epimerase/dehydratase family UP17_12720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UP17_12720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UP17_12720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UP17_12725 PF00483 Nucleotidyl transferase UP17_12745 PF01527 Transposase UP17_12750 PF13276 HTH-like domain UP17_12750 PF00665 Integrase core domain UP17_12750 PF13333 Integrase core domain UP17_12760 PF09297 NADH pyrophosphatase zinc ribbon domain UP17_12760 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain UP17_12760 PF00293 NUDIX domain UP17_12765 PF00534 Glycosyl transferases group 1 UP17_12765 PF13439 Glycosyltransferase Family 4 UP17_12815 PF07681 DoxX UP17_12820 PF01435 Peptidase family M48 UP17_12830 PF13460 NAD(P)H-binding UP17_12835 PF00300 Histidine phosphatase superfamily (branch 1) UP17_12845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_12855 PF03372 Endonuclease/Exonuclease/phosphatase family UP17_12860 PF13091 PLD-like domain UP17_12860 PF13396 Phospholipase_D-nuclease N-terminal UP17_12865 PF00534 Glycosyl transferases group 1 UP17_12865 PF08323 Starch synthase catalytic domain UP17_12870 PF00483 Nucleotidyl transferase UP17_12875 PF00132 Bacterial transferase hexapeptide (six repeats) UP17_12875 PF00483 Nucleotidyl transferase UP17_12880 PF00128 Alpha amylase, catalytic domain UP17_12880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) UP17_12880 PF02806 Alpha amylase, C-terminal all-beta domain UP17_12900 PF03167 Uracil DNA glycosylase superfamily UP17_12925 PF01925 Sulfite exporter TauE/SafE UP17_12930 PF14824 Sirohaem biosynthesis protein central UP17_12935 PF01903 CbiX UP17_12940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_12950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain UP17_12950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain UP17_12960 PF01747 ATP-sulfurylase UP17_12960 PF14306 PUA-like domain UP17_12965 PF01507 Phosphoadenosine phosphosulfate reductase family UP17_12970 PF03358 NADPH-dependent FMN reductase UP17_12985 PF01174 SNO glutamine amidotransferase family UP17_12990 PF01680 SOR/SNZ family UP17_12995 PF00392 Bacterial regulatory proteins, gntR family UP17_12995 PF00155 Aminotransferase class I and II UP17_13005 PF04715 Anthranilate synthase component I, N terminal region UP17_13005 PF00425 chorismate binding enzyme UP17_13010 PF00296 Luciferase-like monooxygenase UP17_13015 PF00296 Luciferase-like monooxygenase UP17_13025 PF08439 Oligopeptidase F UP17_13025 PF01432 Peptidase family M3 UP17_13030 PF02525 Flavodoxin-like fold UP17_13035 PF08892 YqcI/YcgG family UP17_13055 PF00268 Ribonucleotide reductase, small chain UP17_13060 PF00072 Response regulator receiver domain UP17_13060 PF00196 Bacterial regulatory proteins, luxR family UP17_13070 PF01063 Amino-transferase class IV UP17_13075 PF07690 Major Facilitator Superfamily UP17_13080 PF01594 AI-2E family transporter UP17_13090 PF17969 L,D-transpeptidase C-terminal domain UP17_13090 PF03734 L,D-transpeptidase catalytic domain UP17_13115 PF03547 Membrane transport protein UP17_13120 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP17_13130 PF10282 Lactonase, 7-bladed beta-propeller UP17_13145 PF00202 Aminotransferase class-III UP17_13150 PF00171 Aldehyde dehydrogenase family UP17_13155 PF13302 Acetyltransferase (GNAT) domain UP17_13165 PF00313 'Cold-shock' DNA-binding domain UP17_13170 PF00378 Enoyl-CoA hydratase/isomerase UP17_13175 PF00005 ABC transporter UP17_13175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_13180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_13180 PF00005 ABC transporter UP17_13185 PF00528 Binding-protein-dependent transport system inner membrane component UP17_13185 PF12911 N-terminal TM domain of oligopeptide transport permease C UP17_13190 PF00528 Binding-protein-dependent transport system inner membrane component UP17_13195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP17_13215 PF00188 Cysteine-rich secretory protein family UP17_13225 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UP17_13225 PF07733 Bacterial DNA polymerase III alpha NTPase domain UP17_13225 PF00929 Exonuclease UP17_13225 PF14579 Helix-hairpin-helix motif UP17_13225 PF02811 PHP domain UP17_13245 PF01545 Cation efflux family UP17_13265 PF00512 His Kinase A (phospho-acceptor) domain UP17_13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_13270 PF00158 Sigma-54 interaction domain UP17_13270 PF13426 PAS domain UP17_13270 PF02954 Bacterial regulatory protein, Fis family UP17_13275 PF00171 Aldehyde dehydrogenase family UP17_13280 PF03741 Integral membrane protein TerC family UP17_13290 PF13302 Acetyltransferase (GNAT) domain UP17_13295 PF08240 Alcohol dehydrogenase GroES-like domain UP17_13295 PF00107 Zinc-binding dehydrogenase UP17_13300 PF01747 ATP-sulfurylase UP17_13300 PF14306 PUA-like domain UP17_13310 PF01925 Sulfite exporter TauE/SafE UP17_13315 PF00535 Glycosyl transferase family 2 UP17_13320 PF00534 Glycosyl transferases group 1 UP17_13320 PF00862 Sucrose synthase UP17_13345 PF16363 GDP-mannose 4,6 dehydratase UP17_13350 PF01370 NAD dependent epimerase/dehydratase family UP17_13355 PF02719 Polysaccharide biosynthesis protein UP17_13360 PF02350 UDP-N-acetylglucosamine 2-epimerase UP17_13365 PF00005 ABC transporter UP17_13365 PF00664 ABC transporter transmembrane region UP17_13380 PF00704 Glycosyl hydrolases family 18 UP17_13380 PF01476 LysM domain UP17_13385 PF00106 short chain dehydrogenase UP17_13390 PF13396 Phospholipase_D-nuclease N-terminal UP17_13390 PF13091 PLD-like domain UP17_13395 PF02583 Metal-sensitive transcriptional repressor UP17_13405 PF10415 Fumarase C C-terminus UP17_13405 PF00206 Lyase UP17_13410 PF00710 Asparaginase, N-terminal UP17_13410 PF17763 Glutaminase/Asparaginase C-terminal domain UP17_13430 PF02574 Homocysteine S-methyltransferase UP17_13435 PF00324 Amino acid permease UP17_13440 PF01613 Flavin reductase like domain UP17_13445 PF01738 Dienelactone hydrolase family UP17_13450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_13455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_13480 PF02566 OsmC-like protein UP17_13485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_13490 PF03698 Uncharacterised protein family (UPF0180) UP17_13510 PF02898 Nitric oxide synthase, oxygenase domain UP17_13515 PF01638 HxlR-like helix-turn-helix UP17_13520 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_13530 PF07676 WD40-like Beta Propeller Repeat UP17_13530 PF00326 Prolyl oligopeptidase family UP17_13535 PF00571 CBS domain UP17_13540 PF00753 Metallo-beta-lactamase superfamily UP17_13545 PF12679 ABC-2 family transporter protein UP17_13550 PF00005 ABC transporter UP17_13560 PF01758 Sodium Bile acid symporter family UP17_13565 PF12832 MFS_1 like family UP17_13570 PF00512 His Kinase A (phospho-acceptor) domain UP17_13570 PF13188 PAS domain UP17_13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_13570 PF00989 PAS fold UP17_13570 PF13426 PAS domain UP17_13575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_13575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP17_13590 PF00271 Helicase conserved C-terminal domain UP17_13590 PF09382 RQC domain UP17_13590 PF00270 DEAD/DEAH box helicase UP17_13590 PF16124 RecQ zinc-binding UP17_13590 PF00570 HRDC domain UP17_13595 PF01476 LysM domain UP17_13595 PF06725 3D domain UP17_13600 PF11007 Spore coat associated protein JA (CotJA) UP17_13605 PF12652 CotJB protein UP17_13610 PF05067 Manganese containing catalase UP17_13615 PF17783 CvfB-like winged helix domain UP17_13615 PF13509 S1 domain UP17_13625 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP17_13625 PF01411 tRNA synthetases class II (A) UP17_13625 PF02272 DHHA1 domain UP17_13640 PF00583 Acetyltransferase (GNAT) family UP17_13645 PF13538 UvrD-like helicase C-terminal domain UP17_13655 PF06271 RDD family UP17_13660 PF12848 ABC transporter UP17_13660 PF00005 ABC transporter UP17_13675 PF00294 pfkB family carbohydrate kinase UP17_13685 PF02653 Branched-chain amino acid transport system / permease component UP17_13695 PF13407 Periplasmic binding protein domain UP17_13700 PF08220 DeoR-like helix-turn-helix domain UP17_13700 PF00455 DeoR C terminal sensor domain UP17_13705 PF08244 Glycosyl hydrolases family 32 C terminal UP17_13705 PF00251 Glycosyl hydrolases family 32 N-terminal domain UP17_13710 PF02435 Levansucrase/Invertase UP17_13715 PF13416 Bacterial extracellular solute-binding protein UP17_13720 PF12833 Helix-turn-helix domain UP17_13720 PF00072 Response regulator receiver domain UP17_13725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_13725 PF00672 HAMP domain UP17_13725 PF02743 Cache domain UP17_13725 PF06580 Histidine kinase UP17_13740 PF13333 Integrase core domain UP17_13740 PF00665 Integrase core domain UP17_13740 PF13276 HTH-like domain UP17_13750 PF01645 Conserved region in glutamate synthase UP17_13765 PF01145 SPFH domain / Band 7 family UP17_13765 PF15975 Flotillin UP17_13815 PF13333 Integrase core domain UP17_13815 PF00665 Integrase core domain UP17_13815 PF13276 HTH-like domain UP17_13840 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_13845 PF00171 Aldehyde dehydrogenase family UP17_13860 PF00465 Iron-containing alcohol dehydrogenase UP17_13865 PF00171 Aldehyde dehydrogenase family UP17_13880 PF13823 Alcohol dehydrogenase GroES-associated UP17_13880 PF08240 Alcohol dehydrogenase GroES-like domain UP17_13880 PF00107 Zinc-binding dehydrogenase UP17_13885 PF07875 Coat F domain UP17_13920 PF15975 Flotillin UP17_13920 PF01145 SPFH domain / Band 7 family UP17_13930 PF02632 BioY family UP17_13940 PF03006 Haemolysin-III related UP17_13950 PF07486 Cell Wall Hydrolase UP17_13960 PF01894 Uncharacterised protein family UPF0047 UP17_13970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP17_13970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP17_13975 PF00294 pfkB family carbohydrate kinase UP17_13980 PF08220 DeoR-like helix-turn-helix domain UP17_13980 PF00455 DeoR C terminal sensor domain UP17_13985 PF02817 e3 binding domain UP17_13985 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP17_13985 PF00364 Biotin-requiring enzyme UP17_13990 PF00676 Dehydrogenase E1 component UP17_13990 PF16870 2-oxoglutarate dehydrogenase C-terminal UP17_13990 PF02779 Transketolase, pyrimidine binding domain UP17_13995 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase UP17_14005 PF02965 Vitamin B12 dependent methionine synthase, activation domain UP17_14005 PF00809 Pterin binding enzyme UP17_14005 PF02574 Homocysteine S-methyltransferase UP17_14005 PF02310 B12 binding domain UP17_14005 PF02607 B12 binding domain UP17_14010 PF02574 Homocysteine S-methyltransferase UP17_14010 PF02219 Methylenetetrahydrofolate reductase UP17_14015 PF03473 MOSC domain UP17_14015 PF03475 3-alpha domain UP17_14020 PF02735 Ku70/Ku80 beta-barrel domain UP17_14025 PF01068 ATP dependent DNA ligase domain UP17_14035 PF01678 Diaminopimelate epimerase UP17_14040 PF00860 Permease family UP17_14045 PF00484 Carbonic anhydrase UP17_14060 PF02673 Bacitracin resistance protein BacA UP17_14070 PF03788 LrgA family UP17_14075 PF04172 LrgB-like family UP17_14080 PF03033 Glycosyltransferase family 28 N-terminal domain UP17_14080 PF04101 Glycosyltransferase family 28 C-terminal domain UP17_14085 PF00924 Mechanosensitive ion channel UP17_14090 PF01554 MatE UP17_14105 PF00188 Cysteine-rich secretory protein family UP17_14110 PF13115 YtkA-like UP17_14115 PF18698 Histidine kinase sensor domain UP17_14115 PF00989 PAS fold UP17_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_14115 PF00512 His Kinase A (phospho-acceptor) domain UP17_14115 PF00672 HAMP domain UP17_14120 PF00072 Response regulator receiver domain UP17_14120 PF00486 Transcriptional regulatory protein, C terminal UP17_14140 PF02492 CobW/HypB/UreG, nucleotide-binding domain UP17_14140 PF07683 Cobalamin synthesis protein cobW C-terminal domain UP17_14145 PF03079 ARD/ARD' family UP17_14150 PF00596 Class II Aldolase and Adducin N-terminal domain UP17_14160 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain UP17_14160 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain UP17_14165 PF00155 Aminotransferase class I and II UP17_14170 PF00795 Carbon-nitrogen hydrolase UP17_14180 PF01636 Phosphotransferase enzyme family UP17_14185 PF01008 Initiation factor 2 subunit family UP17_14190 PF03816 Cell envelope-related transcriptional attenuator domain UP17_14195 PF01471 Putative peptidoglycan binding domain UP17_14195 PF03572 Peptidase family S41 UP17_14195 PF17820 PDZ domain UP17_14200 PF01048 Phosphorylase superfamily UP17_14215 PF06855 YozE SAM-like fold UP17_14225 PF12544 Lysine-2,3-aminomutase UP17_14230 PF03626 Prokaryotic Cytochrome C oxidase subunit IV UP17_14235 PF00510 Cytochrome c oxidase subunit III UP17_14240 PF00115 Cytochrome C and Quinol oxidase polypeptide I UP17_14245 PF02790 Cytochrome C oxidase subunit II, transmembrane domain UP17_14255 PF14122 YokU-like protein, putative antitoxin UP17_14260 PF12544 Lysine-2,3-aminomutase UP17_14265 PF00158 Sigma-54 interaction domain UP17_14265 PF02954 Bacterial regulatory protein, Fis family UP17_14265 PF13426 PAS domain UP17_14270 PF00583 Acetyltransferase (GNAT) family UP17_14275 PF01546 Peptidase family M20/M25/M40 UP17_14275 PF07687 Peptidase dimerisation domain UP17_14280 PF01144 Coenzyme A transferase UP17_14285 PF01144 Coenzyme A transferase UP17_14290 PF00202 Aminotransferase class-III UP17_14300 PF17676 LD-carboxypeptidase C-terminal domain UP17_14300 PF02016 LD-carboxypeptidase N-terminal domain UP17_14310 PF01641 SelR domain UP17_14315 PF01625 Peptide methionine sulfoxide reductase UP17_14330 PF13472 GDSL-like Lipase/Acylhydrolase family UP17_14335 PF02630 SCO1/SenC UP17_14340 PF02645 Uncharacterised protein, DegV family COG1307 UP17_14350 PF00902 Sec-independent protein translocase protein (TatC) UP17_14355 PF02416 mttA/Hcf106 family UP17_14360 PF00585 C-terminal regulatory domain of Threonine dehydratase UP17_14360 PF00291 Pyridoxal-phosphate dependent enzyme UP17_14365 PF00186 Dihydrofolate reductase UP17_14370 PF00303 Thymidylate synthase UP17_14390 PF03741 Integral membrane protein TerC family UP17_14395 PF14005 YpjP-like protein UP17_14405 PF04445 Putative SAM-dependent methyltransferase UP17_14410 PF06491 Disulphide isomerase UP17_14415 PF00920 Dehydratase family UP17_14420 PF13769 Virulence factor UP17_14420 PF08712 Scaffold protein Nfu/NifU N terminal UP17_14425 PF12848 ABC transporter UP17_14425 PF00005 ABC transporter UP17_14425 PF16326 ABC transporter C-terminal domain UP17_14430 PF01966 HD domain UP17_14435 PF02645 Uncharacterised protein, DegV family COG1307 UP17_14440 PF00255 Glutathione peroxidase UP17_14450 PF04204 Homoserine O-succinyltransferase UP17_14460 PF01209 ubiE/COQ5 methyltransferase family UP17_14465 PF02742 Iron dependent repressor, metal binding and dimerisation domain UP17_14465 PF01325 Iron dependent repressor, N-terminal DNA binding domain UP17_14475 PF01381 Helix-turn-helix UP17_14475 PF08671 Anti-repressor SinI UP17_14480 PF01063 Amino-transferase class IV UP17_14490 PF02652 L-lactate permease UP17_14500 PF02702 Osmosensitive K+ channel His kinase sensor domain UP17_14505 PF02669 K+-transporting ATPase, c chain UP17_14515 PF03814 Potassium-transporting ATPase A subunit UP17_14525 PF10057 Uncharacterized conserved protein (DUF2294) UP17_14535 PF02525 Flavodoxin-like fold UP17_14540 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_14565 PF00474 Sodium:solute symporter family UP17_14570 PF11755 Protein of unknown function (DUF3311) UP17_14575 PF07969 Amidohydrolase family UP17_14580 PF00202 Aminotransferase class-III UP17_14615 PF00999 Sodium/hydrogen exchanger family UP17_14620 PF02080 TrkA-C domain UP17_14620 PF02254 TrkA-N domain UP17_14625 PF02386 Cation transport protein UP17_14635 PF07690 Major Facilitator Superfamily UP17_14640 PF00072 Response regulator receiver domain UP17_14645 PF17203 Single cache domain 3 UP17_14645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP17_14645 PF00989 PAS fold UP17_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_14655 PF03390 2-hydroxycarboxylate transporter family UP17_14665 PF08239 Bacterial SH3 domain UP17_14665 PF00877 NlpC/P60 family UP17_14665 PF01476 LysM domain UP17_14665 PF08239 Bacterial SH3 domain UP17_14665 PF00877 NlpC/P60 family UP17_14665 PF01476 LysM domain UP17_14685 PF07690 Major Facilitator Superfamily UP17_14690 PF12706 Beta-lactamase superfamily domain UP17_14725 PF01609 Transposase DDE domain UP17_14740 PF13460 NAD(P)H-binding UP17_14745 PF01380 SIS domain UP17_14745 PF01418 Helix-turn-helix domain, rpiR family UP17_14750 PF01869 BadF/BadG/BcrA/BcrD ATPase family UP17_14760 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit UP17_14775 PF02378 Phosphotransferase system, EIIC UP17_14785 PF13580 SIS domain UP17_14795 PF03702 Anhydro-N-acetylmuramic acid kinase UP17_14805 PF00175 Oxidoreductase NAD-binding domain UP17_14805 PF00970 Oxidoreductase FAD-binding domain UP17_14805 PF00111 2Fe-2S iron-sulfur cluster binding domain UP17_14820 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin UP17_14845 PF00324 Amino acid permease UP17_14855 PF07687 Peptidase dimerisation domain UP17_14855 PF01546 Peptidase family M20/M25/M40 UP17_14860 PF03606 C4-dicarboxylate anaerobic carrier UP17_14865 PF01546 Peptidase family M20/M25/M40 UP17_14875 PF01614 Bacterial transcriptional regulator UP17_14875 PF09339 IclR helix-turn-helix domain UP17_14895 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP17_14895 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_14900 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase UP17_14905 PF03613 PTS system mannose/fructose/sorbose family IID component UP17_14910 PF03830 PTS system sorbose subfamily IIB component UP17_14920 PF01380 SIS domain UP17_14920 PF01418 Helix-turn-helix domain, rpiR family UP17_14930 PF00324 Amino acid permease UP17_14935 PF00491 Arginase family UP17_14980 PF17370 Family of unknown function (DUF5392) UP17_14990 PF00171 Aldehyde dehydrogenase family UP17_14995 PF01472 PUA domain UP17_14995 PF00696 Amino acid kinase family UP17_15000 PF00970 Oxidoreductase FAD-binding domain UP17_15000 PF00175 Oxidoreductase NAD-binding domain UP17_15000 PF00042 Globin UP17_15005 PF02082 Transcriptional regulator UP17_15015 PF10782 Zinc-finger UP17_15020 PF13456 Reverse transcriptase-like UP17_15025 PF13456 Reverse transcriptase-like UP17_15040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UP17_15040 PF01367 5'-3' exonuclease, C-terminal SAM fold UP17_15045 PF00581 Rhodanese-like domain UP17_15055 PF00350 Dynamin family UP17_15060 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family UP17_15065 PF02797 Chalcone and stilbene synthases, C-terminal domain UP17_15065 PF00195 Chalcone and stilbene synthases, N-terminal domain UP17_15070 PF00860 Permease family UP17_15075 PF00156 Phosphoribosyl transferase domain UP17_15080 PF02074 Carboxypeptidase Taq (M32) metallopeptidase UP17_15085 PF13307 Helicase C-terminal domain UP17_15090 PF00313 'Cold-shock' DNA-binding domain UP17_15095 PF01170 Putative RNA methylase family UPF0020 UP17_15095 PF02926 THUMP domain UP17_15100 PF05103 DivIVA protein UP17_15105 PF06908 YspA SLOG family UP17_15110 PF13482 RNase_H superfamily UP17_15115 PF00271 Helicase conserved C-terminal domain UP17_15115 PF00270 DEAD/DEAH box helicase UP17_15115 PF09369 Domain of unknown function (DUF1998) UP17_15125 PF00011 Hsp20/alpha crystallin family UP17_15145 PF10720 Protein of unknown function (DUF2515) UP17_15165 PF00730 HhH-GPD superfamily base excision DNA repair protein UP17_15165 PF00633 Helix-hairpin-helix motif UP17_15165 PF10576 Iron-sulfur binding domain of endonuclease III UP17_15170 PF07261 Replication initiation and membrane attachment UP17_15175 PF00152 tRNA synthetases class II (D, K and N) UP17_15175 PF01336 OB-fold nucleic acid binding domain UP17_15180 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_15185 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_15195 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal UP17_15195 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal UP17_15200 PF03466 LysR substrate binding domain UP17_15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_15205 PF00474 Sodium:solute symporter family UP17_15220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_15225 PF00171 Aldehyde dehydrogenase family UP17_15230 PF00701 Dihydrodipicolinate synthetase family UP17_15235 PF00392 Bacterial regulatory proteins, gntR family UP17_15240 PF00155 Aminotransferase class I and II UP17_15250 PF13307 Helicase C-terminal domain UP17_15250 PF04851 Type III restriction enzyme, res subunit UP17_15250 PF00929 Exonuclease UP17_15255 PF02261 Aspartate decarboxylase UP17_15260 PF02569 Pantoate-beta-alanine ligase UP17_15265 PF02548 Ketopantoate hydroxymethyltransferase UP17_15270 PF08279 HTH domain UP17_15270 PF03099 Biotin/lipoate A/B protein ligase family UP17_15270 PF02237 Biotin protein ligase C terminal domain UP17_15275 PF12627 Probable RNA and SrmB- binding site of polymerase A UP17_15275 PF13735 tRNA nucleotidyltransferase domain 2 putative UP17_15275 PF01743 Poly A polymerase head domain UP17_15280 PF00534 Glycosyl transferases group 1 UP17_15280 PF13439 Glycosyltransferase Family 4 UP17_15285 PF02585 GlcNAc-PI de-N-acetylase UP17_15290 PF02142 MGS-like domain UP17_15295 PF05173 Dihydrodipicolinate reductase, C-terminus UP17_15295 PF01113 Dihydrodipicolinate reductase, N-terminus UP17_15300 PF03819 MazG nucleotide pyrophosphohydrolase domain UP17_15305 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) UP17_15305 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 UP17_15315 PF04298 Putative neutral zinc metallopeptidase UP17_15320 PF09577 Sporulation protein YpjB (SpoYpjB) UP17_15325 PF07187 Protein of unknown function (DUF1405) UP17_15330 PF00032 Cytochrome b(C-terminal)/b6/petD UP17_15330 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP17_15335 PF00033 Cytochrome b/b6/petB UP17_15340 PF00355 Rieske [2Fe-2S] domain UP17_15345 PF10673 Protein of unknown function (DUF2487) UP17_15350 PF08864 UPF0302 domain UP17_15350 PF08858 IDEAL domain UP17_15360 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP17_15365 PF02153 Prephenate dehydrogenase UP17_15365 PF01842 ACT domain UP17_15370 PF00155 Aminotransferase class I and II UP17_15375 PF07736 Chorismate mutase type I UP17_15380 PF01761 3-dehydroquinate synthase UP17_15385 PF01264 Chorismate synthase UP17_15390 PF03705 CheR methyltransferase, all-alpha domain UP17_15390 PF01739 CheR methyltransferase, SAM binding domain UP17_15395 PF00334 Nucleoside diphosphate kinase UP17_15400 PF00348 Polyprenyl synthetase UP17_15405 PF01209 ubiE/COQ5 methyltransferase family UP17_15415 PF02081 Tryptophan RNA-binding attenuator protein UP17_15420 PF01227 GTP cyclohydrolase I UP17_15425 PF00216 Bacterial DNA-binding protein UP17_15430 PF09547 Stage IV sporulation protein A (spore_IV_A) UP17_15440 PF10966 Protein of unknown function (DUF2768) UP17_15450 PF00202 Aminotransferase class-III UP17_15455 PF00158 Sigma-54 interaction domain UP17_15455 PF00989 PAS fold UP17_15455 PF02954 Bacterial regulatory protein, Fis family UP17_15470 PF00324 Amino acid permease UP17_15475 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus UP17_15475 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus UP17_15480 PF01926 50S ribosome-binding GTPase UP17_15480 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal UP17_15490 PF01070 FMN-dependent dehydrogenase UP17_15495 PF00575 S1 RNA binding domain UP17_15500 PF01553 Acyltransferase UP17_15505 PF02224 Cytidylate kinase UP17_15510 PF17313 Family of unknown function (DUF5359) UP17_15515 PF03413 Peptidase propeptide and YPEB domain UP17_15515 PF14620 YpeB sporulation UP17_15520 PF01471 Putative peptidoglycan binding domain UP17_15520 PF07486 Cell Wall Hydrolase UP17_15525 PF13367 PrsW family intramembrane metalloprotease UP17_15530 PF00710 Asparaginase, N-terminal UP17_15530 PF17763 Glutaminase/Asparaginase C-terminal domain UP17_15540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_15540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP17_15545 PF05389 Negative regulator of genetic competence (MecA) UP17_15550 PF13411 MerR HTH family regulatory protein UP17_15560 PF10864 Protein of unknown function (DUF2663) UP17_15570 PF02517 CPBP intramembrane metalloprotease UP17_15575 PF00270 DEAD/DEAH box helicase UP17_15575 PF00271 Helicase conserved C-terminal domain UP17_15580 PF14493 Helix-turn-helix domain UP17_15590 PF12822 ECF transporter, substrate-specific component UP17_15600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP17_15600 PF01842 ACT domain UP17_15600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP17_15610 PF04542 Sigma-70 region 2 UP17_15610 PF08281 Sigma-70, region 4 UP17_15615 PF00512 His Kinase A (phospho-acceptor) domain UP17_15615 PF00672 HAMP domain UP17_15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_15615 PF00989 PAS fold UP17_15615 PF18698 Histidine kinase sensor domain UP17_15620 PF00486 Transcriptional regulatory protein, C terminal UP17_15620 PF00072 Response regulator receiver domain UP17_15625 PF01578 Cytochrome C assembly protein UP17_15630 PF05140 ResB-like family UP17_15635 PF00578 AhpC/TSA family UP17_15640 PF00849 RNA pseudouridylate synthase UP17_15640 PF01479 S4 domain UP17_15645 PF07670 Nucleoside recognition UP17_15650 PF07670 Nucleoside recognition UP17_15655 PF00768 D-alanyl-D-alanine carboxypeptidase UP17_15655 PF07943 Penicillin-binding protein 5, C-terminal domain UP17_15660 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_15665 PF00578 AhpC/TSA family UP17_15665 PF10417 C-terminal domain of 1-Cys peroxiredoxin UP17_15670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UP17_15670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UP17_15675 PF13047 Protein of unknown function (DUF3907) UP17_15685 PF04079 Segregation and condensation complex subunit ScpB UP17_15690 PF02616 Segregation and condensation protein ScpA UP17_15695 PF03745 Domain of unknown function (DUF309) UP17_15700 PF00583 Acetyltransferase (GNAT) family UP17_15705 PF06207 Protein of unknown function (DUF1002) UP17_15710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain UP17_15710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain UP17_15715 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_15720 PF14097 Stage V sporulation protein AE1 UP17_15725 PF13782 Stage V sporulation protein AB UP17_15730 PF12164 Stage V sporulation protein AA UP17_15735 PF00860 Permease family UP17_15740 PF04542 Sigma-70 region 2 UP17_15740 PF04539 Sigma-70 region 3 UP17_15740 PF04545 Sigma-70, region 4 UP17_15745 PF13581 Histidine kinase-like ATPase domain UP17_15750 PF01740 STAS domain UP17_15755 PF07943 Penicillin-binding protein 5, C-terminal domain UP17_15755 PF00768 D-alanyl-D-alanine carboxypeptidase UP17_15760 PF02885 Glycosyl transferase family, helical bundle domain UP17_15760 PF00591 Glycosyl transferase family, a/b domain UP17_15760 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain UP17_15765 PF01048 Phosphorylase superfamily UP17_15770 PF01676 Metalloenzyme superfamily UP17_15775 PF00589 Phage integrase family UP17_15775 PF02899 Phage integrase, N-terminal SAM-like domain UP17_15780 PF14004 Protein of unknown function (DUF4227) UP17_15785 PF01475 Ferric uptake regulator family UP17_15790 PF01944 Stage II sporulation protein M UP17_15805 PF00293 NUDIX domain UP17_15810 PF00248 Aldo/keto reductase family UP17_15815 PF02566 OsmC-like protein UP17_15820 PF01047 MarR family UP17_15830 PF12146 Serine aminopeptidase, S33 UP17_15835 PF01521 Iron-sulphur cluster biosynthesis UP17_15840 PF08863 YolD-like protein UP17_15845 PF11799 impB/mucB/samB family C-terminal domain UP17_15845 PF11798 IMS family HHH motif UP17_15845 PF00817 impB/mucB/samB family UP17_15850 PF01476 LysM domain UP17_15850 PF00877 NlpC/P60 family UP17_15860 PF00106 short chain dehydrogenase UP17_15865 PF00753 Metallo-beta-lactamase superfamily UP17_15870 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP17_15870 PF03807 NADP oxidoreductase coenzyme F420-dependent UP17_15885 PF09383 NIL domain UP17_15885 PF00005 ABC transporter UP17_15905 PF12706 Beta-lactamase superfamily domain UP17_15905 PF00753 Metallo-beta-lactamase superfamily UP17_15910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain UP17_15910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain UP17_15920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase UP17_15920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain UP17_15925 PF11799 impB/mucB/samB family C-terminal domain UP17_15925 PF00817 impB/mucB/samB family UP17_15925 PF11798 IMS family HHH motif UP17_15930 PF07687 Peptidase dimerisation domain UP17_15930 PF01546 Peptidase family M20/M25/M40 UP17_15935 PF01039 Carboxyl transferase domain UP17_15945 PF03734 L,D-transpeptidase catalytic domain UP17_15950 PF11728 Putative aromatic acid exporter C-terminal domain UP17_15950 PF06081 Aromatic acid exporter family member 1 UP17_15955 PF00005 ABC transporter UP17_15960 PF00528 Binding-protein-dependent transport system inner membrane component UP17_15965 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP17_15970 PF06491 Disulphide isomerase UP17_15980 PF02310 B12 binding domain UP17_15980 PF01642 Methylmalonyl-CoA mutase UP17_15985 PF01642 Methylmalonyl-CoA mutase UP17_15995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) UP17_15995 PF00364 Biotin-requiring enzyme UP17_15995 PF02817 e3 binding domain UP17_16000 PF02779 Transketolase, pyrimidine binding domain UP17_16000 PF02780 Transketolase, C-terminal domain UP17_16005 PF00676 Dehydrogenase E1 component UP17_16010 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_16010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain UP17_16015 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP17_16015 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_16025 PF11118 Protein of unknown function (DUF2627) UP17_16035 PF03009 Glycerophosphoryl diester phosphodiesterase family UP17_16045 PF08769 Sporulation initiation factor Spo0A C terminal UP17_16045 PF00072 Response regulator receiver domain UP17_16050 PF17820 PDZ domain UP17_16050 PF05580 SpoIVB peptidase S55 UP17_16055 PF13476 AAA domain UP17_16060 PF01316 Arginine repressor, DNA binding domain UP17_16060 PF02863 Arginine repressor, C-terminal domain UP17_16065 PF01728 FtsJ-like methyltransferase UP17_16065 PF01479 S4 domain UP17_16070 PF02779 Transketolase, pyrimidine binding domain UP17_16070 PF13292 1-deoxy-D-xylulose-5-phosphate synthase UP17_16070 PF02780 Transketolase, C-terminal domain UP17_16075 PF00348 Polyprenyl synthetase UP17_16080 PF02609 Exonuclease VII small subunit UP17_16085 PF13742 OB-fold nucleic acid binding domain UP17_16085 PF02601 Exonuclease VII, large subunit UP17_16090 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain UP17_16090 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain UP17_16095 PF01029 NusB family UP17_16100 PF03780 Asp23 family, cell envelope-related function UP17_16105 PF00289 Biotin carboxylase, N-terminal domain UP17_16105 PF02785 Biotin carboxylase C-terminal domain UP17_16105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain UP17_16110 PF00364 Biotin-requiring enzyme UP17_16115 PF12685 SpoIIIAH-like protein UP17_16125 PF09581 Stage III sporulation protein AF (Spore_III_AF) UP17_16130 PF09546 Stage III sporulation protein AE (spore_III_AE) UP17_16135 PF06686 Stage III sporulation protein AC/AD protein family UP17_16140 PF06686 Stage III sporulation protein AC/AD protein family UP17_16145 PF09548 Stage III sporulation protein AB (spore_III_AB) UP17_16155 PF01132 Elongation factor P (EF-P) OB domain UP17_16155 PF09285 Elongation factor P, C-terminal UP17_16155 PF08207 Elongation factor P (EF-P) KOW-like domain UP17_16160 PF01321 Creatinase/Prolidase N-terminal domain UP17_16160 PF00557 Metallopeptidase family M24 UP17_16165 PF01220 Dehydroquinase class II UP17_16170 PF11085 Conserved membrane protein YqhR UP17_16175 PF07136 Protein of unknown function (DUF1385) UP17_16185 PF01734 Patatin-like phospholipase UP17_16200 PF02867 Ribonucleotide reductase, barrel domain UP17_16200 PF00317 Ribonucleotide reductase, all-alpha domain UP17_16200 PF03477 ATP cone domain UP17_16205 PF03099 Biotin/lipoate A/B protein ligase family UP17_16210 PF00581 Rhodanese-like domain UP17_16215 PF02347 Glycine cleavage system P-protein UP17_16220 PF02347 Glycine cleavage system P-protein UP17_16225 PF01571 Aminomethyltransferase folate-binding domain UP17_16225 PF08669 Glycine cleavage T-protein C-terminal barrel domain UP17_16230 PF00271 Helicase conserved C-terminal domain UP17_16230 PF00176 SNF2 family N-terminal domain UP17_16235 PF11079 Bacterial protein YqhG of unknown function UP17_16265 PF07963 Prokaryotic N-terminal methylation motif UP17_16270 PF00482 Type II secretion system (T2SS), protein F UP17_16405 PF03960 ArsC family UP17_16415 PF11117 Protein of unknown function (DUF2626) UP17_16425 PF00753 Metallo-beta-lactamase superfamily UP17_16430 PF10958 Protein of unknown function (DUF2759) UP17_16445 PF00246 Zinc carboxypeptidase UP17_16445 PF01476 LysM domain UP17_16450 PF00884 Sulfatase UP17_16455 PF00480 ROK family UP17_16470 PF01694 Rhomboid family UP17_16480 PF01812 5-formyltetrahydrofolate cyclo-ligase family UP17_16505 PF01895 PhoU domain UP17_16510 PF00005 ABC transporter UP17_16515 PF00528 Binding-protein-dependent transport system inner membrane component UP17_16520 PF00528 Binding-protein-dependent transport system inner membrane component UP17_16525 PF12849 PBP superfamily domain UP17_16535 PF07690 Major Facilitator Superfamily UP17_16540 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain UP17_16540 PF02777 Iron/manganese superoxide dismutases, C-terminal domain UP17_16545 PF04306 Protein of unknown function (DUF456) UP17_16550 PF06691 Protein of unknown function (DUF1189) UP17_16560 PF04551 GcpE protein UP17_16575 PF01475 Ferric uptake regulator family UP17_16580 PF00950 ABC 3 transport family UP17_16585 PF00005 ABC transporter UP17_16595 PF01261 Xylose isomerase-like TIM barrel UP17_16600 PF00271 Helicase conserved C-terminal domain UP17_16600 PF00270 DEAD/DEAH box helicase UP17_16610 PF02401 LytB protein UP17_16615 PF01784 NIF3 (NGG1p interacting factor 3) UP17_16620 PF04816 tRNA (adenine(22)-N(1))-methyltransferase UP17_16625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III UP17_16635 PF04542 Sigma-70 region 2 UP17_16635 PF03979 Sigma-70 factor, region 1.1 UP17_16635 PF00140 Sigma-70 factor, region 1.2 UP17_16635 PF04539 Sigma-70 region 3 UP17_16635 PF04545 Sigma-70, region 4 UP17_16640 PF10410 DnaB-helicase binding domain of primase UP17_16640 PF08275 DNA primase catalytic core, N-terminal domain UP17_16640 PF01807 CHC2 zinc finger UP17_16645 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 UP17_16650 PF03618 Kinase/pyrophosphorylase UP17_16655 PF08279 HTH domain UP17_16655 PF00571 CBS domain UP17_16660 PF02092 Glycyl-tRNA synthetase beta subunit UP17_16665 PF02091 Glycyl-tRNA synthetase alpha subunit UP17_16670 PF02565 Recombination protein O C terminal UP17_16670 PF11967 Recombination protein O N terminal UP17_16675 PF01926 50S ribosome-binding GTPase UP17_16675 PF07650 KH domain UP17_16680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP17_16685 PF01219 Prokaryotic diacylglycerol kinase UP17_16690 PF02130 Uncharacterized protein family UPF0054 UP17_16695 PF01966 HD domain UP17_16695 PF07698 7TM receptor with intracellular HD hydrolase UP17_16695 PF07697 7TM-HD extracellular UP17_16700 PF02562 PhoH-like protein UP17_16705 PF06898 Putative stage IV sporulation protein YqfD UP17_16710 PF07873 YabP family UP17_16720 PF12127 SigmaW regulon antibacterial UP17_16725 PF01957 NfeD-like C-terminal, partner-binding UP17_16725 PF01972 Serine dehydrogenase proteinase UP17_16730 PF09424 Yqey-like protein UP17_16735 PF01165 Ribosomal protein S21 UP17_16740 PF02690 Na+/Pi-cotransporter UP17_16745 PF01791 DeoC/LacD family aldolase UP17_16750 PF01938 TRAM domain UP17_16750 PF04055 Radical SAM superfamily UP17_16750 PF00919 Uncharacterized protein family UPF0004 UP17_16755 PF04452 RNA methyltransferase UP17_16765 PF00684 DnaJ central domain UP17_16765 PF01556 DnaJ C terminal domain UP17_16765 PF00226 DnaJ domain UP17_16770 PF00012 Hsp70 protein UP17_16775 PF01025 GrpE UP17_16785 PF06969 HemN C-terminal domain UP17_16785 PF04055 Radical SAM superfamily UP17_16790 PF00679 Elongation factor G C-terminus UP17_16790 PF06421 GTP-binding protein LepA C-terminus UP17_16790 PF00009 Elongation factor Tu GTP binding domain UP17_16790 PF03144 Elongation factor Tu domain 2 UP17_16800 PF07454 Stage II sporulation protein P (SpoIIP) UP17_16805 PF03418 Germination protease UP17_16810 PF01649 Ribosomal protein S20 UP17_16815 PF06144 DNA polymerase III, delta subunit UP17_16825 PF13567 Domain of unknown function (DUF4131) UP17_16825 PF03772 Competence protein UP17_16825 PF00753 Metallo-beta-lactamase superfamily UP17_16830 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP17_16835 PF10531 SLBB domain UP17_16840 PF03807 NADP oxidoreductase coenzyme F420-dependent UP17_16840 PF14748 Pyrroline-5-carboxylate reductase dimerisation UP17_16845 PF13649 Methyltransferase domain UP17_16855 PF01966 HD domain UP17_16860 PF01467 Cytidylyltransferase-like UP17_16865 PF01985 CRS1 / YhbY (CRM) domain UP17_16870 PF08501 Shikimate dehydrogenase substrate binding domain UP17_16870 PF01488 Shikimate / quinate 5-dehydrogenase UP17_16870 PF18317 Shikimate 5'-dehydrogenase C-terminal domain UP17_16875 PF01926 50S ribosome-binding GTPase UP17_16885 PF02666 Phosphatidylserine decarboxylase UP17_16890 PF01066 CDP-alcohol phosphatidyltransferase UP17_16905 PF04542 Sigma-70 region 2 UP17_16905 PF04545 Sigma-70, region 4 UP17_16915 PF01053 Cys/Met metabolism PLP-dependent enzyme UP17_16920 PF00291 Pyridoxal-phosphate dependent enzyme UP17_16925 PF01048 Phosphorylase superfamily UP17_16930 PF08241 Methyltransferase domain UP17_16935 PF10750 Protein of unknown function (DUF2536) UP17_16945 PF00905 Penicillin binding protein transpeptidase domain UP17_16945 PF03717 Penicillin-binding Protein dimerisation domain UP17_16950 PF01272 Transcription elongation factor, GreA/GreB, C-term UP17_16950 PF03449 Transcription elongation factor, N-terminal UP17_16970 PF00485 Phosphoribulokinase / Uridine kinase family UP17_16995 PF02618 YceG-like family UP17_17000 PF06949 Protein of unknown function (DUF1292) UP17_17005 PF03652 Holliday junction resolvase UP17_17010 PF06135 IreB regulatory phosphoprotein UP17_17015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP17_17015 PF01411 tRNA synthetases class II (A) UP17_17015 PF02272 DHHA1 domain UP17_17020 PF01594 AI-2E family transporter UP17_17030 PF05239 PRC-barrel domain UP17_17035 PF04536 TPM domain UP17_17040 PF04011 LemA family UP17_17045 PF13538 UvrD-like helicase C-terminal domain UP17_17045 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain UP17_17045 PF14490 Helix-hairpin-helix containing domain UP17_17060 PF00266 Aminotransferase class-V UP17_17065 PF02082 Transcriptional regulator UP17_17075 PF05496 Holliday junction DNA helicase RuvB P-loop domain UP17_17075 PF12002 MgsA AAA+ ATPase C terminal UP17_17075 PF16193 AAA C-terminal domain UP17_17090 PF00005 ABC transporter UP17_17095 PF00392 Bacterial regulatory proteins, gntR family UP17_17105 PF03816 Cell envelope-related transcriptional attenuator domain UP17_17120 PF00156 Phosphoribosyl transferase domain UP17_17125 PF00005 ABC transporter UP17_17125 PF00664 ABC transporter transmembrane region UP17_17200 PF13439 Glycosyltransferase Family 4 UP17_17200 PF00534 Glycosyl transferases group 1 UP17_17210 PF00534 Glycosyl transferases group 1 UP17_17210 PF13439 Glycosyltransferase Family 4 UP17_17215 PF13439 Glycosyltransferase Family 4 UP17_17215 PF00534 Glycosyl transferases group 1 UP17_17225 PF02397 Bacterial sugar transferase UP17_17230 PF00483 Nucleotidyl transferase UP17_17235 PF02719 Polysaccharide biosynthesis protein UP17_17250 PF13614 AAA domain UP17_17260 PF08671 Anti-repressor SinI UP17_17260 PF01381 Helix-turn-helix UP17_17280 PF07690 Major Facilitator Superfamily UP17_17290 PF00082 Subtilase family UP17_17295 PF00005 ABC transporter UP17_17300 PF00005 ABC transporter UP17_17300 PF12399 Branched-chain amino acid ATP-binding cassette transporter UP17_17305 PF11862 Domain of unknown function (DUF3382) UP17_17305 PF02653 Branched-chain amino acid transport system / permease component UP17_17310 PF02653 Branched-chain amino acid transport system / permease component UP17_17315 PF13458 Periplasmic binding protein UP17_17325 PF13458 Periplasmic binding protein UP17_17330 PF00899 ThiF family UP17_17335 PF07687 Peptidase dimerisation domain UP17_17335 PF01546 Peptidase family M20/M25/M40 UP17_17345 PF02938 GAD domain UP17_17345 PF00152 tRNA synthetases class II (D, K and N) UP17_17345 PF01336 OB-fold nucleic acid binding domain UP17_17350 PF13393 Histidyl-tRNA synthetase UP17_17350 PF03129 Anticodon binding domain UP17_17360 PF08239 Bacterial SH3 domain UP17_17360 PF01520 N-acetylmuramoyl-L-alanine amidase UP17_17365 PF02580 D-Tyr-tRNA(Tyr) deacylase UP17_17370 PF13291 ACT domain UP17_17370 PF04607 Region found in RelA / SpoT proteins UP17_17370 PF02824 TGS domain UP17_17375 PF00665 Integrase core domain UP17_17375 PF13276 HTH-like domain UP17_17375 PF13333 Integrase core domain UP17_17385 PF00156 Phosphoribosyl transferase domain UP17_17390 PF01368 DHH family UP17_17390 PF02272 DHHA1 domain UP17_17390 PF17768 RecJ OB domain UP17_17390 PF10141 Single-strand DNA-specific exonuclease, C terminal domain UP17_17395 PF07549 SecD/SecF GG Motif UP17_17395 PF02355 Protein export membrane protein UP17_17405 PF01943 Polysaccharide biosynthesis protein UP17_17405 PF14667 Polysaccharide biosynthesis C-terminal domain UP17_17410 PF04239 Protein of unknown function (DUF421) UP17_17415 PF12670 Protein of unknown function (DUF3792) UP17_17420 PF02699 Preprotein translocase subunit UP17_17425 PF01702 Queuine tRNA-ribosyltransferase UP17_17430 PF02547 Queuosine biosynthesis protein UP17_17435 PF11146 Protein of unknown function (DUF2905) UP17_17440 PF05496 Holliday junction DNA helicase RuvB P-loop domain UP17_17440 PF05491 RuvB C-terminal winged helix domain UP17_17440 PF17864 RuvB AAA lid domain UP17_17450 PF08977 Bypass of Forespore C, N terminal UP17_17450 PF08955 BofC C-terminal domain UP17_17470 PF02445 Quinolinate synthetase A protein UP17_17475 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain UP17_17475 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain UP17_17480 PF00890 FAD binding domain UP17_17480 PF02910 Fumarate reductase flavoprotein C-term UP17_17485 PF00266 Aminotransferase class-V UP17_17490 PF08279 HTH domain UP17_17490 PF02829 3H domain UP17_17495 PF00800 Prephenate dehydratase UP17_17495 PF01842 ACT domain UP17_17500 PF01842 ACT domain UP17_17505 PF09269 Domain of unknown function (DUF1967) UP17_17505 PF01018 GTP1/OBG UP17_17505 PF01926 50S ribosome-binding GTPase UP17_17510 PF14682 Sporulation initiation phospho-transferase B, C-terminal UP17_17510 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP17_17515 PF01016 Ribosomal L27 protein UP17_17520 PF04327 Cysteine protease Prp UP17_17525 PF00829 Ribosomal prokaryotic L21 protein UP17_17530 PF00575 S1 RNA binding domain UP17_17530 PF10150 Ribonuclease E/G family UP17_17535 PF02163 Peptidase family M50 UP17_17540 PF01551 Peptidase family M23 UP17_17550 PF00575 S1 RNA binding domain UP17_17555 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain UP17_17560 PF03775 Septum formation inhibitor MinC, C-terminal domain UP17_17570 PF04085 rod shape-determining protein MreC UP17_17585 PF04002 RadC-like JAB domain UP17_17590 PF02545 Maf-like protein UP17_17600 PF06750 Bacterial Peptidase A24 N-terminal domain UP17_17600 PF01478 Type IV leader peptidase family UP17_17610 PF08245 Mur ligase middle domain UP17_17610 PF02875 Mur ligase family, glutamate ligase domain UP17_17615 PF08443 RimK-like ATP-grasp domain UP17_17615 PF18030 RimK PreATP-grasp domain UP17_17620 PF08443 RimK-like ATP-grasp domain UP17_17625 PF00133 tRNA synthetases class I (I, L, M and V) UP17_17625 PF10458 Valyl tRNA synthetase tRNA binding arm UP17_17625 PF08264 Anticodon-binding domain of tRNA UP17_17645 PF00202 Aminotransferase class-III UP17_17650 PF00490 Delta-aminolevulinic acid dehydratase UP17_17660 PF03900 Porphobilinogen deaminase, C-terminal domain UP17_17660 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain UP17_17665 PF01578 Cytochrome C assembly protein UP17_17670 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain UP17_17670 PF01488 Shikimate / quinate 5-dehydrogenase UP17_17670 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain UP17_17680 PF01926 50S ribosome-binding GTPase UP17_17685 PF00004 ATPase family associated with various cellular activities (AAA) UP17_17685 PF05362 Lon protease (S16) C-terminal proteolytic domain UP17_17685 PF02190 ATP-dependent protease La (LON) substrate-binding domain UP17_17690 PF00004 ATPase family associated with various cellular activities (AAA) UP17_17690 PF05362 Lon protease (S16) C-terminal proteolytic domain UP17_17695 PF06689 ClpX C4-type zinc finger UP17_17695 PF10431 C-terminal, D2-small domain, of ClpB protein UP17_17695 PF07724 AAA domain (Cdc48 subfamily) UP17_17700 PF05697 Bacterial trigger factor protein (TF) UP17_17700 PF05698 Bacterial trigger factor protein (TF) C-terminus UP17_17700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase UP17_17710 PF00694 Aconitase C-terminal domain UP17_17715 PF00330 Aconitase family (aconitate hydratase) UP17_17720 PF00180 Isocitrate/isopropylmalate dehydrogenase UP17_17725 PF08502 LeuA allosteric (dimerisation) domain UP17_17725 PF00682 HMGL-like UP17_17730 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain UP17_17730 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain UP17_17735 PF01842 ACT domain UP17_17735 PF10369 Small subunit of acetolactate synthase UP17_17740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP17_17740 PF00205 Thiamine pyrophosphate enzyme, central domain UP17_17740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP17_17805 PF12850 Calcineurin-like phosphoesterase superfamily domain UP17_17810 PF01725 Ham1 family UP17_17820 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_17825 PF03845 Spore germination protein UP17_17830 PF10646 Sporulation and spore germination UP17_17835 PF01177 Asp/Glu/Hydantoin racemase UP17_17840 PF01047 MarR family UP17_17845 PF00196 Bacterial regulatory proteins, luxR family UP17_17850 PF03061 Thioesterase superfamily UP17_17855 PF13085 2Fe-2S iron-sulfur cluster binding domain UP17_17855 PF13183 4Fe-4S dicluster domain UP17_17860 PF02910 Fumarate reductase flavoprotein C-term UP17_17860 PF00890 FAD binding domain UP17_17865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit UP17_17870 PF10702 Protein of unknown function (DUF2507) UP17_17875 PF13840 ACT domain UP17_17875 PF00696 Amino acid kinase family UP17_17880 PF08459 UvrC Helix-hairpin-helix N-terminal UP17_17880 PF02151 UvrB/uvrC motif UP17_17880 PF01541 GIY-YIG catalytic domain UP17_17885 PF00085 Thioredoxin UP17_17890 PF01012 Electron transfer flavoprotein domain UP17_17890 PF00766 Electron transfer flavoprotein FAD-binding domain UP17_17895 PF01012 Electron transfer flavoprotein domain UP17_17900 PF00378 Enoyl-CoA hydratase/isomerase UP17_17905 PF08359 YsiA-like protein, C-terminal region UP17_17905 PF00440 Bacterial regulatory proteins, tetR family UP17_17910 PF13193 AMP-binding enzyme C-terminal domain UP17_17910 PF00501 AMP-binding enzyme UP17_17920 PF03994 Domain of Unknown Function (DUF350) UP17_17925 PF00488 MutS domain V UP17_17925 PF01713 Smr domain UP17_17930 PF14791 DNA polymerase beta thumb UP17_17930 PF02811 PHP domain UP17_17930 PF14716 Helix-hairpin-helix domain UP17_17935 PF02674 Colicin V production protein UP17_17940 PF05164 Cell division protein ZapA UP17_17945 PF01351 Ribonuclease HII UP17_17945 PF11858 Domain of unknown function (DUF3378) UP17_17950 PF03484 tRNA synthetase B5 domain UP17_17950 PF03147 Ferredoxin-fold anticodon binding domain UP17_17950 PF01588 Putative tRNA binding domain UP17_17950 PF03483 B3/4 domain UP17_17950 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain UP17_17955 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain UP17_17955 PF01409 tRNA synthetases class II core domain (F) UP17_17960 PF00588 SpoU rRNA Methylase family UP17_17960 PF08032 RNA 2'-O ribose methyltransferase substrate binding UP17_17965 PF14098 Small, acid-soluble spore protein I UP17_17980 PF11181 Heat induced stress protein YflT UP17_17980 PF09557 Domain of unknown function (DUF2382) UP17_17985 PF13183 4Fe-4S dicluster domain UP17_17985 PF02754 Cysteine-rich domain UP17_17990 PF02913 FAD linked oxidases, C-terminal domain UP17_17990 PF01565 FAD binding domain UP17_17995 PF05651 Putative sugar diacid recognition UP17_17995 PF13556 PucR C-terminal helix-turn-helix domain UP17_17995 PF17853 GGDEF-like domain UP17_18000 PF02652 L-lactate permease UP17_18005 PF00392 Bacterial regulatory proteins, gntR family UP17_18005 PF07729 FCD domain UP17_18010 PF02754 Cysteine-rich domain UP17_18015 PF11870 Domain of unknown function (DUF3390) UP17_18015 PF13183 4Fe-4S dicluster domain UP17_18015 PF02589 LUD domain UP17_18020 PF02589 LUD domain UP17_18025 PF05343 M42 glutamyl aminopeptidase UP17_18045 PF06961 Protein of unknown function (DUF1294) UP17_18050 PF00453 Ribosomal protein L20 UP17_18055 PF01632 Ribosomal protein L35 UP17_18060 PF05198 Translation initiation factor IF-3, N-terminal domain UP17_18060 PF00707 Translation initiation factor IF-3, C-terminal domain UP17_18065 PF00583 Acetyltransferase (GNAT) family UP17_18070 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP17_18070 PF02824 TGS domain UP17_18070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP17_18070 PF03129 Anticodon binding domain UP17_18080 PF01695 IstB-like ATP binding protein UP17_18080 PF07319 Primosomal protein DnaI N-terminus UP17_18085 PF07261 Replication initiation and membrane attachment UP17_18090 PF03477 ATP cone domain UP17_18095 PF02675 S-adenosylmethionine decarboxylase UP17_18105 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UP17_18105 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP17_18110 PF01121 Dephospho-CoA kinase UP17_18115 PF02659 Putative manganese efflux pump UP17_18120 PF06827 Zinc finger found in FPG and IleRS UP17_18120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain UP17_18120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain UP17_18125 PF00476 DNA polymerase family A UP17_18125 PF01367 5'-3' exonuclease, C-terminal SAM fold UP17_18125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain UP17_18130 PF01145 SPFH domain / Band 7 family UP17_18140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_18140 PF00989 PAS fold UP17_18140 PF16736 Single Cache-like UP17_18140 PF00512 His Kinase A (phospho-acceptor) domain UP17_18145 PF00072 Response regulator receiver domain UP17_18145 PF00486 Transcriptional regulatory protein, C terminal UP17_18150 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UP17_18150 PF00056 lactate/malate dehydrogenase, NAD binding domain UP17_18155 PF00180 Isocitrate/isopropylmalate dehydrogenase UP17_18160 PF00285 Citrate synthase, C-terminal domain UP17_18165 PF04284 Protein of unknown function (DUF441) UP17_18170 PF01594 AI-2E family transporter UP17_18175 PF00463 Isocitrate lyase family UP17_18180 PF01274 Malate synthase UP17_18190 PF02887 Pyruvate kinase, alpha/beta domain UP17_18190 PF00224 Pyruvate kinase, barrel domain UP17_18190 PF00391 PEP-utilising enzyme, mobile domain UP17_18195 PF00365 Phosphofructokinase UP17_18200 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit UP17_18205 PF01039 Carboxyl transferase domain UP17_18205 PF17848 Acetyl-coA carboxylase zinc finger domain UP17_18210 PF00392 Bacterial regulatory proteins, gntR family UP17_18210 PF07729 FCD domain UP17_18215 PF00390 Malic enzyme, N-terminal domain UP17_18215 PF03949 Malic enzyme, NAD binding domain UP17_18220 PF01336 OB-fold nucleic acid binding domain UP17_18220 PF02811 PHP domain UP17_18220 PF07733 Bacterial DNA polymerase III alpha NTPase domain UP17_18220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain UP17_18220 PF14579 Helix-hairpin-helix motif UP17_18225 PF14034 Sporulation protein YtrH UP17_18235 PF02272 DHHA1 domain UP17_18235 PF01368 DHH family UP17_18245 PF00571 CBS domain UP17_18245 PF07085 DRTGG domain UP17_18245 PF00392 Bacterial regulatory proteins, gntR family UP17_18245 PF03061 Thioesterase superfamily UP17_18260 PF00557 Metallopeptidase family M24 UP17_18260 PF01321 Creatinase/Prolidase N-terminal domain UP17_18270 PF00582 Universal stress protein family UP17_18275 PF14698 Argininosuccinate lyase C-terminal UP17_18275 PF00206 Lyase UP17_18280 PF00764 Arginosuccinate synthase UP17_18290 PF00994 Probable molybdopterin binding domain UP17_18300 PF00871 Acetokinase family UP17_18305 PF02384 N-6 DNA Methylase UP17_18310 PF08534 Redoxin UP17_18315 PF09579 Sporulation protein YtfJ (Spore_YtfJ) UP17_18325 PF06271 RDD family UP17_18330 PF01343 Peptidase family S49 UP17_18335 PF01513 ATP-NAD kinase UP17_18340 PF01026 TatD related DNase UP17_18345 PF00005 ABC transporter UP17_18350 PF00528 Binding-protein-dependent transport system inner membrane component UP17_18355 PF01910 Thiamine-binding protein UP17_18375 PF00892 EamA-like transporter family UP17_18380 PF07969 Amidohydrolase family UP17_18385 PF13193 AMP-binding enzyme C-terminal domain UP17_18385 PF00501 AMP-binding enzyme UP17_18390 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP17_18395 PF02926 THUMP domain UP17_18395 PF02568 Thiamine biosynthesis protein (ThiI) UP17_18400 PF00266 Aminotransferase class-V UP17_18405 PF06160 Septation ring formation regulator, EzrA UP17_18410 PF02811 PHP domain UP17_18415 PF16295 Tetracyclin repressor-like, C-terminal domain UP17_18415 PF00440 Bacterial regulatory proteins, tetR family UP17_18420 PF13185 GAF domain UP17_18425 PF00163 Ribosomal protein S4/S9 N-terminal domain UP17_18425 PF01479 S4 domain UP17_18430 PF01479 S4 domain UP17_18430 PF00579 tRNA synthetases class I (W and Y) UP17_18440 PF13193 AMP-binding enzyme C-terminal domain UP17_18440 PF00501 AMP-binding enzyme UP17_18445 PF00583 Acetyltransferase (GNAT) family UP17_18450 PF00571 CBS domain UP17_18455 PF00850 Histone deacetylase domain UP17_18460 PF00356 Bacterial regulatory proteins, lacI family UP17_18465 PF01817 Chorismate mutase type II UP17_18465 PF00793 DAHP synthetase I family UP17_18470 PF11009 Protein of unknown function (DUF2847) UP17_18475 PF12732 YtxH-like protein UP17_18485 PF02073 Thermophilic metalloprotease (M29) UP17_18505 PF07285 Protein of unknown function (DUF1444) UP17_18510 PF00085 Thioredoxin UP17_18520 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ UP17_18525 PF12833 Helix-turn-helix domain UP17_18525 PF06445 GyrI-like small molecule binding domain UP17_18530 PF01931 Protein of unknown function DUF84 UP17_18535 PF05343 M42 glutamyl aminopeptidase UP17_18545 PF00753 Metallo-beta-lactamase superfamily UP17_18550 PF02390 Putative methyltransferase UP17_18555 PF14165 YtzH-like protein UP17_18560 PF01636 Phosphotransferase enzyme family UP17_18575 PF02834 LigT like Phosphoesterase UP17_18580 PF01566 Natural resistance-associated macrophage protein UP17_18585 PF01063 Amino-transferase class IV UP17_18590 PF01546 Peptidase family M20/M25/M40 UP17_18595 PF01554 MatE UP17_18600 PF09335 SNARE associated Golgi protein UP17_18605 PF10502 Signal peptidase, peptidase S26 UP17_18615 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_18625 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_18630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases UP17_18635 PF02602 Uroporphyrinogen-III synthase HemD UP17_18650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain UP17_18650 PF00056 lactate/malate dehydrogenase, NAD binding domain UP17_18655 PF02652 L-lactate permease UP17_18660 PF01323 DSBA-like thioredoxin domain UP17_18670 PF07690 Major Facilitator Superfamily UP17_18680 PF00106 short chain dehydrogenase UP17_18685 PF02129 X-Pro dipeptidyl-peptidase (S15 family) UP17_18690 PF00440 Bacterial regulatory proteins, tetR family UP17_18700 PF03773 Predicted permease UP17_18720 PF00478 IMP dehydrogenase / GMP reductase domain UP17_18730 PF03831 PhnA domain UP17_18730 PF08274 PhnA Zinc-Ribbon UP17_18735 PF00486 Transcriptional regulatory protein, C terminal UP17_18735 PF00072 Response regulator receiver domain UP17_18740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_18745 PF00005 ABC transporter UP17_18765 PF08220 DeoR-like helix-turn-helix domain UP17_18770 PF01479 S4 domain UP17_18770 PF00849 RNA pseudouridylate synthase UP17_18775 PF01943 Polysaccharide biosynthesis protein UP17_18775 PF14667 Polysaccharide biosynthesis C-terminal domain UP17_18800 PF10957 Sporulation protein Cse60 UP17_18805 PF00180 Isocitrate/isopropylmalate dehydrogenase UP17_18815 PF00581 Rhodanese-like domain UP17_18820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family UP17_18830 PF00248 Aldo/keto reductase family UP17_18835 PF07690 Major Facilitator Superfamily UP17_18840 PF01638 HxlR-like helix-turn-helix UP17_18855 PF01773 Na+ dependent nucleoside transporter N-terminus UP17_18855 PF07662 Na+ dependent nucleoside transporter C-terminus UP17_18870 PF12146 Serine aminopeptidase, S33 UP17_18875 PF03551 Transcriptional regulator PadR-like family UP17_18900 PF08361 MAATS-type transcriptional repressor, C-terminal region UP17_18900 PF00440 Bacterial regulatory proteins, tetR family UP17_18910 PF04055 Radical SAM superfamily UP17_18915 PF01242 6-pyruvoyl tetrahydropterin synthase UP17_18920 PF06508 Queuosine biosynthesis protein QueC UP17_18925 PF00672 HAMP domain UP17_18925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain UP17_18925 PF12729 Four helix bundle sensory module for signal transduction UP17_18935 PF08245 Mur ligase middle domain UP17_18940 PF14102 Capsule biosynthesis CapC UP17_18955 PF05908 Poly-gamma-glutamate hydrolase UP17_18960 PF01476 LysM domain UP17_18960 PF00877 NlpC/P60 family UP17_18975 PF02040 Arsenical pump membrane protein UP17_18995 PF00583 Acetyltransferase (GNAT) family UP17_19000 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin UP17_19000 PF18277 AbrB C-terminal domain UP17_19005 PF13536 Putative multidrug resistance efflux transporter UP17_19015 PF00893 Small Multidrug Resistance protein UP17_19020 PF00893 Small Multidrug Resistance protein UP17_19025 PF05675 Protein of unknown function (DUF817) UP17_19030 PF13443 Cro/C1-type HTH DNA-binding domain UP17_19035 PF11188 Protein of unknown function (DUF2975) UP17_19040 PF00271 Helicase conserved C-terminal domain UP17_19040 PF00176 SNF2 family N-terminal domain UP17_19040 PF04434 SWIM zinc finger UP17_19050 PF03845 Spore germination protein UP17_19055 PF05504 Spore germination B3/ GerAC like, C-terminal UP17_19060 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_19065 PF09335 SNARE associated Golgi protein UP17_19070 PF01569 PAP2 superfamily UP17_19080 PF00067 Cytochrome P450 UP17_19105 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_19105 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP17_19110 PF00202 Aminotransferase class-III UP17_19115 PF00171 Aldehyde dehydrogenase family UP17_19120 PF02954 Bacterial regulatory protein, Fis family UP17_19120 PF00158 Sigma-54 interaction domain UP17_19120 PF13426 PAS domain UP17_19125 PF13276 HTH-like domain UP17_19125 PF00665 Integrase core domain UP17_19125 PF13333 Integrase core domain UP17_19135 PF02525 Flavodoxin-like fold UP17_19140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_19145 PF07681 DoxX UP17_19155 PF08125 Mannitol dehydrogenase C-terminal domain UP17_19155 PF01232 Mannitol dehydrogenase Rossmann domain UP17_19160 PF05043 Mga helix-turn-helix domain UP17_19160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP17_19160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP17_19160 PF00874 PRD domain UP17_19160 PF08279 HTH domain UP17_19165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit UP17_19165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP17_19165 PF02378 Phosphotransferase system, EIIC UP17_19170 PF03600 Citrate transporter UP17_19175 PF12833 Helix-turn-helix domain UP17_19180 PF12431 Transcriptional regulator UP17_19180 PF00072 Response regulator receiver domain UP17_19180 PF08279 HTH domain UP17_19185 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP17_19185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_19185 PF17203 Single cache domain 3 UP17_19185 PF00989 PAS fold UP17_19195 PF00730 HhH-GPD superfamily base excision DNA repair protein UP17_19195 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain UP17_19200 PF12833 Helix-turn-helix domain UP17_19200 PF02805 Metal binding domain of Ada UP17_19205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain UP17_19205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain UP17_19210 PF10901 Protein of unknown function (DUF2690) UP17_19220 PF00293 NUDIX domain UP17_19230 PF03932 CutC family UP17_19235 PF17094 Uncharacterised protein family (UPF0715) UP17_19245 PF13411 MerR HTH family regulatory protein UP17_19245 PF07739 TipAS antibiotic-recognition domain UP17_19260 PF00805 Pentapeptide repeats (8 copies) UP17_19285 PF00375 Sodium:dicarboxylate symporter family UP17_19310 PF00324 Amino acid permease UP17_19345 PF18693 TRAM domain UP17_19345 PF00919 Uncharacterized protein family UPF0004 UP17_19345 PF04055 Radical SAM superfamily UP17_19350 PF07690 Major Facilitator Superfamily UP17_19370 PF00072 Response regulator receiver domain UP17_19370 PF00196 Bacterial regulatory proteins, luxR family UP17_19375 PF00672 HAMP domain UP17_19375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_19375 PF07730 Histidine kinase UP17_19395 PF00440 Bacterial regulatory proteins, tetR family UP17_19400 PF00266 Aminotransferase class-V UP17_19410 PF03301 Tryptophan 2,3-dioxygenase UP17_19415 PF04199 Putative cyclase UP17_19420 PF01810 LysE type translocator UP17_19435 PF13091 PLD-like domain UP17_19450 PF00881 Nitroreductase family UP17_19455 PF01323 DSBA-like thioredoxin domain UP17_19460 PF00873 AcrB/AcrD/AcrF family UP17_19475 PF03422 Carbohydrate binding module (family 6) UP17_19475 PF00457 Glycosyl hydrolases family 11 UP17_19475 PF01522 Polysaccharide deacetylase UP17_19500 PF00583 Acetyltransferase (GNAT) family UP17_19505 PF13276 HTH-like domain UP17_19505 PF00665 Integrase core domain UP17_19505 PF13333 Integrase core domain UP17_19515 PF08666 SAF domain UP17_19515 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus UP17_19520 PF00171 Aldehyde dehydrogenase family UP17_19525 PF00701 Dihydrodipicolinate synthetase family UP17_19530 PF07690 Major Facilitator Superfamily UP17_19535 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP17_19535 PF13378 Enolase C-terminal domain-like UP17_19540 PF07729 FCD domain UP17_19540 PF00392 Bacterial regulatory proteins, gntR family UP17_19560 PF03466 LysR substrate binding domain UP17_19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_19570 PF07690 Major Facilitator Superfamily UP17_19575 PF00440 Bacterial regulatory proteins, tetR family UP17_19580 PF17770 Ribonuclease J C-terminal domain UP17_19580 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain UP17_19580 PF00753 Metallo-beta-lactamase superfamily UP17_19585 PF00324 Amino acid permease UP17_19595 PF07690 Major Facilitator Superfamily UP17_19600 PF03590 Aspartate-ammonia ligase UP17_19605 PF01810 LysE type translocator UP17_19610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain UP17_19610 PF03129 Anticodon binding domain UP17_19610 PF02824 TGS domain UP17_19610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) UP17_19630 PF00324 Amino acid permease UP17_19640 PF00108 Thiolase, N-terminal domain UP17_19640 PF02803 Thiolase, C-terminal domain UP17_19645 PF01144 Coenzyme A transferase UP17_19650 PF01144 Coenzyme A transferase UP17_19655 PF00202 Aminotransferase class-III UP17_19680 PF02954 Bacterial regulatory protein, Fis family UP17_19680 PF00158 Sigma-54 interaction domain UP17_19680 PF13426 PAS domain UP17_19695 PF00356 Bacterial regulatory proteins, lacI family UP17_19700 PF05116 Sucrose-6F-phosphate phosphohydrolase UP17_19715 PF01144 Coenzyme A transferase UP17_19720 PF01144 Coenzyme A transferase UP17_19730 PF00158 Sigma-54 interaction domain UP17_19730 PF02954 Bacterial regulatory protein, Fis family UP17_19730 PF00989 PAS fold UP17_19740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP17_19740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP17_19750 PF00561 alpha/beta hydrolase fold UP17_19760 PF02801 Beta-ketoacyl synthase, C-terminal domain UP17_19760 PF00109 Beta-ketoacyl synthase, N-terminal domain UP17_19765 PF01047 MarR family UP17_19780 PF00557 Metallopeptidase family M24 UP17_19785 PF04237 YjbR UP17_19815 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_19820 PF01152 Bacterial-like globin UP17_19825 PF02557 D-alanyl-D-alanine carboxypeptidase UP17_19835 PF01152 Bacterial-like globin UP17_19840 PF04134 Protein of unknown function, DUF393 UP17_19845 PF01557 Fumarylacetoacetate (FAA) hydrolase family UP17_19890 PF01381 Helix-turn-helix UP17_19900 PF01872 RibD C-terminal domain UP17_19905 PF00107 Zinc-binding dehydrogenase UP17_19905 PF08240 Alcohol dehydrogenase GroES-like domain UP17_19915 PF01048 Phosphorylase superfamily UP17_19935 PF00144 Beta-lactamase UP17_19940 PF00144 Beta-lactamase UP17_19945 PF02667 Short chain fatty acid transporter UP17_19965 PF05437 Branched-chain amino acid transport protein (AzlD) UP17_19970 PF03591 AzlC protein UP17_19975 PF00155 Aminotransferase class I and II UP17_19975 PF00392 Bacterial regulatory proteins, gntR family UP17_19980 PF01381 Helix-turn-helix UP17_20000 PF03852 DNA mismatch endonuclease Vsr UP17_20040 PF08676 MutL C terminal dimerisation domain UP17_20040 PF01119 DNA mismatch repair protein, C-terminal domain UP17_20045 PF00145 C-5 cytosine-specific DNA methylase UP17_20100 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH UP17_20100 PF04740 LXG domain of WXG superfamily UP17_20110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_20110 PF00512 His Kinase A (phospho-acceptor) domain UP17_20120 PF17760 UvrA interaction domain UP17_20120 PF17755 UvrA DNA-binding domain UP17_20120 PF00005 ABC transporter UP17_20135 PF00072 Response regulator receiver domain UP17_20135 PF08664 YcbB domain UP17_20140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_20145 PF00375 Sodium:dicarboxylate symporter family UP17_20155 PF13538 UvrD-like helicase C-terminal domain UP17_20160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP17_20160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP17_20165 PF01566 Natural resistance-associated macrophage protein UP17_20175 PF05901 Excalibur calcium-binding domain UP17_20180 PF02554 Carbon starvation protein CstA UP17_20185 PF00072 Response regulator receiver domain UP17_20185 PF04397 LytTr DNA-binding domain UP17_20190 PF06580 Histidine kinase UP17_20190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_20190 PF13492 GAF domain UP17_20190 PF07694 5TMR of 5TMR-LYT UP17_20220 PF02868 Thermolysin metallopeptidase, alpha-helical domain UP17_20220 PF16485 Protealysin propeptide UP17_20220 PF01447 Thermolysin metallopeptidase, catalytic domain UP17_20245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain UP17_20245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UP17_20255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_20270 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP17_20285 PF00905 Penicillin binding protein transpeptidase domain UP17_20295 PF00916 Sulfate permease family UP17_20295 PF01740 STAS domain UP17_20300 PF00484 Carbonic anhydrase UP17_20310 PF00672 HAMP domain UP17_20310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_20310 PF00512 His Kinase A (phospho-acceptor) domain UP17_20315 PF00486 Transcriptional regulatory protein, C terminal UP17_20315 PF00072 Response regulator receiver domain UP17_20320 PF00892 EamA-like transporter family UP17_20330 PF00293 NUDIX domain UP17_20335 PF00067 Cytochrome P450 UP17_20335 PF00175 Oxidoreductase NAD-binding domain UP17_20335 PF00258 Flavodoxin UP17_20335 PF00667 FAD binding domain UP17_20345 PF03819 MazG nucleotide pyrophosphohydrolase domain UP17_20350 PF03641 Possible lysine decarboxylase UP17_20355 PF07977 FabA-like domain UP17_20360 PF01569 PAP2 superfamily UP17_20365 PF01738 Dienelactone hydrolase family UP17_20385 PF03180 NLPA lipoprotein UP17_20390 PF00528 Binding-protein-dependent transport system inner membrane component UP17_20395 PF00005 ABC transporter UP17_20395 PF09383 NIL domain UP17_20420 PF01979 Amidohydrolase family UP17_20425 PF08240 Alcohol dehydrogenase GroES-like domain UP17_20425 PF00107 Zinc-binding dehydrogenase UP17_20435 PF00474 Sodium:solute symporter family UP17_20440 PF11755 Protein of unknown function (DUF3311) UP17_20445 PF01546 Peptidase family M20/M25/M40 UP17_20445 PF07687 Peptidase dimerisation domain UP17_20465 PF03611 PTS system sugar-specific permease component UP17_20480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 UP17_20495 PF01047 MarR family UP17_20500 PF07690 Major Facilitator Superfamily UP17_20505 PF00440 Bacterial regulatory proteins, tetR family UP17_20515 PF03466 LysR substrate binding domain UP17_20515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_20520 PF00892 EamA-like transporter family UP17_20525 PF00488 MutS domain V UP17_20525 PF01713 Smr domain UP17_20530 PF08402 TOBE domain UP17_20530 PF00005 ABC transporter UP17_20540 PF00367 phosphotransferase system, EIIB UP17_20540 PF02378 Phosphotransferase system, EIIC UP17_20540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 UP17_20545 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase UP17_20555 PF01418 Helix-turn-helix domain, rpiR family UP17_20555 PF01380 SIS domain UP17_20560 PF10787 Uncharacterised protein from bacillus cereus group UP17_20570 PF00155 Aminotransferase class I and II UP17_20570 PF00392 Bacterial regulatory proteins, gntR family UP17_20575 PF00881 Nitroreductase family UP17_20595 PF00860 Permease family UP17_20600 PF07969 Amidohydrolase family UP17_20605 PF07969 Amidohydrolase family UP17_20610 PF07969 Amidohydrolase family UP17_20615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP17_20630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP17_20640 PF00528 Binding-protein-dependent transport system inner membrane component UP17_20645 PF00005 ABC transporter UP17_20645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_20650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_20650 PF00005 ABC transporter UP17_20655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_20655 PF06580 Histidine kinase UP17_20655 PF00672 HAMP domain UP17_20655 PF02743 Cache domain UP17_20660 PF17853 GGDEF-like domain UP17_20660 PF12833 Helix-turn-helix domain UP17_20670 PF02525 Flavodoxin-like fold UP17_20680 PF02696 Uncharacterized ACR, YdiU/UPF0061 family UP17_20705 PF08240 Alcohol dehydrogenase GroES-like domain UP17_20705 PF00107 Zinc-binding dehydrogenase UP17_20740 PF01740 STAS domain UP17_20745 PF01037 Lrp/AsnC ligand binding domain UP17_20760 PF02538 Hydantoinase B/oxoprolinase UP17_20765 PF05378 Hydantoinase/oxoprolinase N-terminal region UP17_20765 PF01968 Hydantoinase/oxoprolinase UP17_20770 PF07849 Protein of unknown function (DUF1641) UP17_20775 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_20785 PF00750 tRNA synthetases class I (R) UP17_20785 PF05746 DALR anticodon binding domain UP17_20785 PF03485 Arginyl tRNA synthetase N terminal domain UP17_20790 PF00072 Response regulator receiver domain UP17_20790 PF00196 Bacterial regulatory proteins, luxR family UP17_20795 PF00487 Fatty acid desaturase UP17_20800 PF00704 Glycosyl hydrolases family 18 UP17_20805 PF00892 EamA-like transporter family UP17_20810 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) UP17_20825 PF12679 ABC-2 family transporter protein UP17_20830 PF00005 ABC transporter UP17_20845 PF06725 3D domain UP17_20845 PF07501 G5 domain UP17_20845 PF03990 G5-linked-Ubiquitin-like domain UP17_20850 PF00583 Acetyltransferase (GNAT) family UP17_20860 PF01636 Phosphotransferase enzyme family UP17_20900 PF00375 Sodium:dicarboxylate symporter family UP17_20930 PF03466 LysR substrate binding domain UP17_20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_20940 PF07486 Cell Wall Hydrolase UP17_20945 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_20950 PF01037 Lrp/AsnC ligand binding domain UP17_20975 PF00665 Integrase core domain UP17_20975 PF13333 Integrase core domain UP17_20975 PF13276 HTH-like domain UP17_20995 PF01037 Lrp/AsnC ligand binding domain UP17_21000 PF12706 Beta-lactamase superfamily domain UP17_21005 PF07690 Major Facilitator Superfamily UP17_21020 PF01471 Putative peptidoglycan binding domain UP17_21020 PF07486 Cell Wall Hydrolase UP17_21040 PF16295 Tetracyclin repressor-like, C-terminal domain UP17_21040 PF00440 Bacterial regulatory proteins, tetR family UP17_21045 PF01979 Amidohydrolase family UP17_21055 PF02525 Flavodoxin-like fold UP17_21080 PF01348 Type II intron maturase UP17_21080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_21120 PF00266 Aminotransferase class-V UP17_21125 PF01592 NifU-like N terminal domain UP17_21130 PF04443 Acyl-protein synthetase, LuxE UP17_21135 PF00550 Phosphopantetheine attachment site UP17_21145 PF00501 AMP-binding enzyme UP17_21150 PF02627 Carboxymuconolactone decarboxylase family UP17_21155 PF00440 Bacterial regulatory proteins, tetR family UP17_21165 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_21185 PF08281 Sigma-70, region 4 UP17_21185 PF04542 Sigma-70 region 2 UP17_21190 PF00300 Histidine phosphatase superfamily (branch 1) UP17_21205 PF00753 Metallo-beta-lactamase superfamily UP17_21210 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_21240 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_21240 PF01348 Type II intron maturase UP17_21245 PF11188 Protein of unknown function (DUF2975) UP17_21250 PF13443 Cro/C1-type HTH DNA-binding domain UP17_21260 PF00905 Penicillin binding protein transpeptidase domain UP17_21260 PF05569 BlaR1 peptidase M56 UP17_21265 PF03965 Penicillinase repressor UP17_21270 PF03180 NLPA lipoprotein UP17_21285 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_21285 PF01348 Type II intron maturase UP17_21300 PF01569 PAP2 superfamily UP17_21310 PF00557 Metallopeptidase family M24 UP17_21315 PF05163 DinB family UP17_21335 PF01494 FAD binding domain UP17_21360 PF10997 Alternate to MurJ UP17_21365 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_21365 PF01348 Type II intron maturase UP17_21385 PF02567 Phenazine biosynthesis-like protein UP17_21420 PF05525 Branched-chain amino acid transport protein UP17_21430 PF03313 Serine dehydratase alpha chain UP17_21435 PF01842 ACT domain UP17_21435 PF03315 Serine dehydratase beta chain UP17_21455 PF02872 5'-nucleotidase, C-terminal domain UP17_21455 PF00149 Calcineurin-like phosphoesterase UP17_21460 PF00392 Bacterial regulatory proteins, gntR family UP17_21460 PF00155 Aminotransferase class I and II UP17_21465 PF00892 EamA-like transporter family UP17_21470 PF02567 Phenazine biosynthesis-like protein UP17_21480 PF13302 Acetyltransferase (GNAT) domain UP17_21490 PF07702 UTRA domain UP17_21490 PF00392 Bacterial regulatory proteins, gntR family UP17_21505 PF00005 ABC transporter UP17_21510 PF00440 Bacterial regulatory proteins, tetR family UP17_21525 PF02386 Cation transport protein UP17_21530 PF02080 TrkA-C domain UP17_21530 PF02254 TrkA-N domain UP17_21535 PF10049 Protein of unknown function (DUF2283) UP17_21540 PF01740 STAS domain UP17_21545 PF09313 Domain of unknown function (DUF1971) UP17_21545 PF03848 Tellurite resistance protein TehB UP17_21550 PF08241 Methyltransferase domain UP17_21555 PF01209 ubiE/COQ5 methyltransferase family UP17_21560 PF03551 Transcriptional regulator PadR-like family UP17_21575 PF16363 GDP-mannose 4,6 dehydratase UP17_21580 PF00483 Nucleotidyl transferase UP17_21585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I UP17_21585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain UP17_21585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II UP17_21585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III UP17_21590 PF13460 NAD(P)H-binding UP17_21595 PF02600 Disulfide bond formation protein DsbB UP17_21600 PF13462 Thioredoxin UP17_21605 PF02082 Transcriptional regulator UP17_21610 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase UP17_21610 PF08239 Bacterial SH3 domain UP17_21610 PF05036 Sporulation related domain UP17_21625 PF08327 Activator of Hsp90 ATPase homolog 1-like protein UP17_21630 PF01022 Bacterial regulatory protein, arsR family UP17_21640 PF02082 Transcriptional regulator UP17_21645 PF00085 Thioredoxin UP17_21655 PF01270 Glycosyl hydrolases family 8 UP17_21660 PF02660 Glycerol-3-phosphate acyltransferase UP17_21665 PF01596 O-methyltransferase UP17_21695 PF01047 MarR family UP17_21700 PF07690 Major Facilitator Superfamily UP17_21715 PF00005 ABC transporter UP17_21735 PF04229 GrpB protein UP17_21735 PF13673 Acetyltransferase (GNAT) domain UP17_21745 PF00196 Bacterial regulatory proteins, luxR family UP17_21745 PF00072 Response regulator receiver domain UP17_21755 PF09335 SNARE associated Golgi protein UP17_21770 PF01522 Polysaccharide deacetylase UP17_21770 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain UP17_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_21775 PF00672 HAMP domain UP17_21775 PF00512 His Kinase A (phospho-acceptor) domain UP17_21780 PF00072 Response regulator receiver domain UP17_21780 PF00486 Transcriptional regulatory protein, C terminal UP17_21800 PF12728 Helix-turn-helix domain UP17_21800 PF12727 PBP superfamily domain UP17_21815 PF02632 BioY family UP17_21825 PF00202 Aminotransferase class-III UP17_21840 PF00854 POT family UP17_21850 PF11738 Protein of unknown function (DUF3298) UP17_21850 PF13739 Deacetylase PdaC UP17_21855 PF08281 Sigma-70, region 4 UP17_21855 PF04542 Sigma-70 region 2 UP17_21860 PF13739 Deacetylase PdaC UP17_21860 PF01522 Polysaccharide deacetylase UP17_21860 PF11738 Protein of unknown function (DUF3298) UP17_21865 PF01709 Transcriptional regulator UP17_21880 PF06751 Ethanolamine ammonia lyase large subunit (EutB) UP17_21885 PF06277 Ethanolamine utilisation protein EutA UP17_21890 PF04346 Ethanolamine utilisation protein, EutH UP17_21895 PF03861 ANTAR domain UP17_21895 PF00072 Response regulator receiver domain UP17_21900 PF12282 Signal transduction histidine kinase UP17_21900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_21900 PF07568 Histidine kinase UP17_21915 PF00092 von Willebrand factor type A domain UP17_21920 PF07728 AAA domain (dynein-related subfamily) UP17_21925 PF05525 Branched-chain amino acid transport protein UP17_21930 PF14602 Hexapeptide repeat of succinyl-transferase UP17_21930 PF12464 Maltose acetyltransferase UP17_21935 PF13460 NAD(P)H-binding UP17_21960 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster UP17_21960 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_21965 PF01493 GXGXG motif UP17_21965 PF00310 Glutamine amidotransferases class-II UP17_21965 PF04898 Glutamate synthase central domain UP17_21965 PF01645 Conserved region in glutamate synthase UP17_21970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_21970 PF03466 LysR substrate binding domain UP17_21975 PF07875 Coat F domain UP17_21990 PF00082 Subtilase family UP17_21990 PF17936 Bacterial Ig domain UP17_21995 PF08264 Anticodon-binding domain of tRNA UP17_21995 PF00133 tRNA synthetases class I (I, L, M and V) UP17_21995 PF09334 tRNA synthetases class I (M) UP17_21995 PF13603 Leucyl-tRNA synthetase, Domain 2 UP17_22000 PF10732 Protein of unknown function (DUF2524) UP17_22010 PF16199 Radical_SAM C-terminal domain UP17_22010 PF04055 Radical SAM superfamily UP17_22015 PF06962 Putative rRNA methylase UP17_22025 PF12146 Serine aminopeptidase, S33 UP17_22030 PF00132 Bacterial transferase hexapeptide (six repeats) UP17_22040 PF01293 Phosphoenolpyruvate carboxykinase UP17_22045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain UP17_22045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain UP17_22045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain UP17_22060 PF02350 UDP-N-acetylglucosamine 2-epimerase UP17_22065 PF00082 Subtilase family UP17_22085 PF01925 Sulfite exporter TauE/SafE UP17_22090 PF04463 Protein of unknown function (DUF523) UP17_22095 PF10763 Protein of unknown function (DUF2584) UP17_22100 PF00326 Prolyl oligopeptidase family UP17_22110 PF00005 ABC transporter UP17_22115 PF00528 Binding-protein-dependent transport system inner membrane component UP17_22120 PF00293 NUDIX domain UP17_22135 PF00210 Ferritin-like domain UP17_22140 PF02664 S-Ribosylhomocysteinase (LuxS) UP17_22145 PF01809 Putative membrane protein insertion efficiency factor UP17_22150 PF01297 Zinc-uptake complex component A periplasmic UP17_22150 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment UP17_22155 PF03480 Bacterial extracellular solute-binding protein, family 7 UP17_22160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_22160 PF17203 Single cache domain 3 UP17_22160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP17_22165 PF08279 HTH domain UP17_22165 PF00072 Response regulator receiver domain UP17_22170 PF13378 Enolase C-terminal domain-like UP17_22170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain UP17_22175 PF13193 AMP-binding enzyme C-terminal domain UP17_22175 PF00501 AMP-binding enzyme UP17_22180 PF00378 Enoyl-CoA hydratase/isomerase UP17_22185 PF12697 Alpha/beta hydrolase family UP17_22190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain UP17_22190 PF16582 Middle domain of thiamine pyrophosphate UP17_22190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain UP17_22195 PF00425 chorismate binding enzyme UP17_22200 PF01040 UbiA prenyltransferase family UP17_22205 PF01258 Prokaryotic dksA/traR C4-type zinc finger UP17_22340 PF02308 MgtC family UP17_22355 PF00155 Aminotransferase class I and II UP17_22380 PF01619 Proline dehydrogenase UP17_22385 PF00171 Aldehyde dehydrogenase family UP17_22390 PF00474 Sodium:solute symporter family UP17_22395 PF13556 PucR C-terminal helix-turn-helix domain UP17_22395 PF17853 GGDEF-like domain UP17_22400 PF02082 Transcriptional regulator UP17_22405 PF05995 Cysteine dioxygenase type I UP17_22410 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal UP17_22410 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal UP17_22415 PF13305 Tetracyclin repressor-like, C-terminal domain UP17_22415 PF00440 Bacterial regulatory proteins, tetR family UP17_22420 PF00753 Metallo-beta-lactamase superfamily UP17_22425 PF01235 Sodium:alanine symporter family UP17_22430 PF01266 FAD dependent oxidoreductase UP17_22430 PF16901 C-terminal domain of alpha-glycerophosphate oxidase UP17_22435 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP17_22435 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP17_22440 PF00230 Major intrinsic protein UP17_22445 PF04309 Glycerol-3-phosphate responsive antiterminator UP17_22455 PF01717 Cobalamin-independent synthase, Catalytic domain UP17_22465 PF07690 Major Facilitator Superfamily UP17_22475 PF00324 Amino acid permease UP17_22480 PF02868 Thermolysin metallopeptidase, alpha-helical domain UP17_22480 PF03413 Peptidase propeptide and YPEB domain UP17_22480 PF07504 Fungalysin/Thermolysin Propeptide Motif UP17_22480 PF01447 Thermolysin metallopeptidase, catalytic domain UP17_22505 PF11495 Archaeal transcriptional regulator TrmB UP17_22505 PF01978 Sugar-specific transcriptional regulator TrmB UP17_22510 PF01925 Sulfite exporter TauE/SafE UP17_22515 PF00106 short chain dehydrogenase UP17_22520 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_22525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UP17_22530 PF00107 Zinc-binding dehydrogenase UP17_22530 PF08240 Alcohol dehydrogenase GroES-like domain UP17_22540 PF07486 Cell Wall Hydrolase UP17_22545 PF06949 Protein of unknown function (DUF1292) UP17_22550 PF04542 Sigma-70 region 2 UP17_22550 PF08281 Sigma-70, region 4 UP17_22560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily UP17_22565 PF00253 Ribosomal protein S14p/S29e UP17_22575 PF00471 Ribosomal protein L33 UP17_22580 PF07683 Cobalamin synthesis protein cobW C-terminal domain UP17_22580 PF02492 CobW/HypB/UreG, nucleotide-binding domain UP17_22585 PF01541 GIY-YIG catalytic domain UP17_22590 PF11611 Domain of unknown function (DUF4352) UP17_22590 PF08139 Prokaryotic membrane lipoprotein lipid attachment site UP17_22595 PF00245 Alkaline phosphatase UP17_22605 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_22610 PF02222 ATP-grasp domain UP17_22615 PF00246 Zinc carboxypeptidase UP17_22615 PF01476 LysM domain UP17_22620 PF00199 Catalase UP17_22620 PF06628 Catalase-related immune-responsive UP17_22625 PF00440 Bacterial regulatory proteins, tetR family UP17_22630 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV UP17_22640 PF07690 Major Facilitator Superfamily UP17_22650 PF00324 Amino acid permease UP17_22660 PF03845 Spore germination protein UP17_22665 PF05504 Spore germination B3/ GerAC like, C-terminal UP17_22680 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_22690 PF05163 DinB family UP17_22695 PF00583 Acetyltransferase (GNAT) family UP17_22700 PF04545 Sigma-70, region 4 UP17_22710 PF01804 Penicillin amidase UP17_22735 PF07690 Major Facilitator Superfamily UP17_22740 PF13520 Amino acid permease UP17_22745 PF02673 Bacitracin resistance protein BacA UP17_22750 PF03009 Glycerophosphoryl diester phosphodiesterase family UP17_22755 PF00269 Small, acid-soluble spore proteins, alpha/beta type UP17_22760 PF00704 Glycosyl hydrolases family 18 UP17_22760 PF01476 LysM domain UP17_22765 PF07885 Ion channel UP17_22765 PF02254 TrkA-N domain UP17_22770 PF08868 YugN-like family UP17_22775 PF00342 Phosphoglucose isomerase UP17_22780 PF00465 Iron-containing alcohol dehydrogenase UP17_22785 PF04070 Domain of unknown function (DUF378) UP17_22790 PF00575 S1 RNA binding domain UP17_22795 PF00209 Sodium:neurotransmitter symporter family UP17_22805 PF00155 Aminotransferase class I and II UP17_22810 PF01037 Lrp/AsnC ligand binding domain UP17_22815 PF08386 TAP-like protein UP17_22815 PF00561 alpha/beta hydrolase fold UP17_22825 PF00155 Aminotransferase class I and II UP17_22830 PF01258 Prokaryotic dksA/traR C4-type zinc finger UP17_22840 PF08000 Bacterial PH domain UP17_22840 PF11724 YvbH-like oligomerisation region UP17_22845 PF00583 Acetyltransferase (GNAT) family UP17_22855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD UP17_22860 PF08810 Kinase associated protein B UP17_22865 PF00929 Exonuclease UP17_22885 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter UP17_22890 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UP17_22895 PF00361 Proton-conducting membrane transporter UP17_22900 PF01899 Na+/H+ ion antiporter subunit UP17_22905 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) UP17_22920 PF03061 Thioesterase superfamily UP17_22925 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) UP17_22930 PF01494 FAD binding domain UP17_22935 PF01872 RibD C-terminal domain UP17_22935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region UP17_22940 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase UP17_22940 PF00925 GTP cyclohydrolase II UP17_22950 PF00883 Cytosol aminopeptidase family, catalytic domain UP17_22950 PF02789 Cytosol aminopeptidase family, N-terminal domain UP17_22955 PF02681 Divergent PAP2 family UP17_22965 PF06725 3D domain UP17_22970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_22975 PF14068 Putative membrane protein UP17_22980 PF13344 Haloacid dehalogenase-like hydrolase UP17_22980 PF00293 NUDIX domain UP17_22985 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_22990 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_22995 PF01521 Iron-sulphur cluster biosynthesis UP17_23005 PF07293 Protein of unknown function (DUF1450) UP17_23010 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_23015 PF07315 Protein of unknown function (DUF1462) UP17_23020 PF01106 NifU-like domain UP17_23025 PF08544 GHMP kinases C terminal UP17_23025 PF00288 GHMP kinases N terminal domain UP17_23030 PF00291 Pyridoxal-phosphate dependent enzyme UP17_23035 PF03447 Homoserine dehydrogenase, NAD binding domain UP17_23035 PF01842 ACT domain UP17_23035 PF00742 Homoserine dehydrogenase UP17_23050 PF04608 Phosphatidylglycerophosphatase A UP17_23055 PF13344 Haloacid dehalogenase-like hydrolase UP17_23060 PF01934 Protein of unknown function DUF86 UP17_23075 PF06265 Protein of unknown function (DUF1027) UP17_23080 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) UP17_23085 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family UP17_23085 PF04055 Radical SAM superfamily UP17_23090 PF01551 Peptidase family M23 UP17_23095 PF09560 Sporulation protein YunB (Spo_YunB) UP17_23105 PF08827 Domain of unknown function (DUF1805) UP17_23110 PF02872 5'-nucleotidase, C-terminal domain UP17_23115 PF01925 Sulfite exporter TauE/SafE UP17_23120 PF01904 Protein of unknown function DUF72 UP17_23125 PF01458 Uncharacterized protein family (UPF0051) UP17_23130 PF01592 NifU-like N terminal domain UP17_23135 PF00266 Aminotransferase class-V UP17_23140 PF01458 Uncharacterized protein family (UPF0051) UP17_23145 PF00005 ABC transporter UP17_23150 PF03180 NLPA lipoprotein UP17_23155 PF00528 Binding-protein-dependent transport system inner membrane component UP17_23160 PF09383 NIL domain UP17_23160 PF00005 ABC transporter UP17_23165 PF01053 Cys/Met metabolism PLP-dependent enzyme UP17_23170 PF00085 Thioredoxin UP17_23175 PF01751 Toprim domain UP17_23180 PF01597 Glycine cleavage H-protein UP17_23185 PF03960 ArsC family UP17_23190 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_23190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_23190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_23195 PF02803 Thiolase, C-terminal domain UP17_23195 PF00108 Thiolase, N-terminal domain UP17_23200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP17_23200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP17_23200 PF00378 Enoyl-CoA hydratase/isomerase UP17_23205 PF01619 Proline dehydrogenase UP17_23215 PF07875 Coat F domain UP17_23220 PF01098 Cell cycle protein UP17_23225 PF00356 Bacterial regulatory proteins, lacI family UP17_23225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family UP17_23230 PF00324 Amino acid permease UP17_23240 PF05504 Spore germination B3/ GerAC like, C-terminal UP17_23250 PF03323 Bacillus/Clostridium GerA spore germination protein UP17_23270 PF03737 Aldolase/RraA UP17_23275 PF00884 Sulfatase UP17_23280 PF01497 Periplasmic binding protein UP17_23285 PF00005 ABC transporter UP17_23290 PF01032 FecCD transport family UP17_23295 PF01032 FecCD transport family UP17_23310 PF13243 Squalene-hopene cyclase C-terminal domain UP17_23310 PF13249 Squalene-hopene cyclase N-terminal domain UP17_23325 PF00672 HAMP domain UP17_23325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_23325 PF00512 His Kinase A (phospho-acceptor) domain UP17_23330 PF00486 Transcriptional regulatory protein, C terminal UP17_23330 PF00072 Response regulator receiver domain UP17_23335 PF01625 Peptide methionine sulfoxide reductase UP17_23340 PF00196 Bacterial regulatory proteins, luxR family UP17_23340 PF00072 Response regulator receiver domain UP17_23345 PF07730 Histidine kinase UP17_23350 PF00487 Fatty acid desaturase UP17_23355 PF04703 FaeA-like protein UP17_23355 PF00072 Response regulator receiver domain UP17_23360 PF00989 PAS fold UP17_23360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_23360 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain UP17_23360 PF17203 Single cache domain 3 UP17_23365 PF01970 Tripartite tricarboxylate transporter TctA family UP17_23375 PF03401 Tripartite tricarboxylate transporter family receptor UP17_23385 PF03466 LysR substrate binding domain UP17_23385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_23390 PF02634 FdhD/NarQ family UP17_23395 PF10057 Uncharacterized conserved protein (DUF2294) UP17_23400 PF00037 4Fe-4S binding domain UP17_23400 PF00384 Molybdopterin oxidoreductase UP17_23400 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UP17_23400 PF01568 Molydopterin dinucleotide binding domain UP17_23400 PF04879 Molybdopterin oxidoreductase Fe4S4 domain UP17_23405 PF07849 Protein of unknown function (DUF1641) UP17_23425 PF01668 SmpB protein UP17_23430 PF00575 S1 RNA binding domain UP17_23430 PF17876 Cold shock domain UP17_23430 PF08206 Ribonuclease B OB domain UP17_23430 PF00773 RNB domain UP17_23435 PF12146 Serine aminopeptidase, S33 UP17_23440 PF03840 Preprotein translocase SecG subunit UP17_23450 PF02557 D-alanyl-D-alanine carboxypeptidase UP17_23455 PF03952 Enolase, N-terminal domain UP17_23455 PF00113 Enolase, C-terminal TIM barrel domain UP17_23460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) UP17_23460 PF01676 Metalloenzyme superfamily UP17_23465 PF00121 Triosephosphate isomerase UP17_23470 PF00162 Phosphoglycerate kinase UP17_23475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP17_23475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain UP17_23480 PF04198 Putative sugar-binding domain UP17_23490 PF00309 Sigma-54 factor, Activator interacting domain (AID) UP17_23490 PF04552 Sigma-54, DNA binding domain UP17_23490 PF04963 Sigma-54 factor, core binding domain UP17_23500 PF00574 Clp protease UP17_23505 PF00381 PTS HPr component phosphorylation site UP17_23510 PF02650 WhiA C-terminal HTH domain UP17_23510 PF14527 WhiA LAGLIDADG-like domain UP17_23510 PF10298 WhiA N-terminal LAGLIDADG-like domain UP17_23515 PF01933 Uncharacterised protein family UPF0052 UP17_23520 PF03668 P-loop ATPase protein family UP17_23525 PF00293 NUDIX domain UP17_23530 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_23540 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase UP17_23540 PF01502 Phosphoribosyl-AMP cyclohydrolase UP17_23545 PF00977 Histidine biosynthesis protein UP17_23550 PF00977 Histidine biosynthesis protein UP17_23555 PF00117 Glutamine amidotransferase class-I UP17_23560 PF00475 Imidazoleglycerol-phosphate dehydratase UP17_23565 PF00815 Histidinol dehydrogenase UP17_23570 PF01634 ATP phosphoribosyltransferase UP17_23575 PF13393 Histidyl-tRNA synthetase UP17_23585 PF04203 Sortase domain UP17_23590 PF14602 Hexapeptide repeat of succinyl-transferase UP17_23595 PF13419 Haloacid dehalogenase-like hydrolase UP17_23600 PF07670 Nucleoside recognition UP17_23605 PF01790 Prolipoprotein diacylglyceryl transferase UP17_23610 PF02603 HPr Serine kinase N terminus UP17_23610 PF07475 HPr Serine kinase C-terminal domain UP17_23615 PF13349 Putative adhesin UP17_23620 PF00005 ABC transporter UP17_23620 PF17755 UvrA DNA-binding domain UP17_23620 PF17760 UvrA interaction domain UP17_23625 PF04851 Type III restriction enzyme, res subunit UP17_23625 PF17757 UvrB interaction domain UP17_23625 PF12344 Ultra-violet resistance protein B UP17_23625 PF00271 Helicase conserved C-terminal domain UP17_23625 PF02151 UvrB/uvrC motif UP17_23630 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) UP17_23635 PF00199 Catalase UP17_23635 PF06628 Catalase-related immune-responsive UP17_23640 PF03176 MMPL family UP17_23645 PF04264 YceI-like domain UP17_23650 PF01032 FecCD transport family UP17_23655 PF01032 FecCD transport family UP17_23660 PF01497 Periplasmic binding protein UP17_23665 PF17820 PDZ domain UP17_23670 PF03572 Peptidase family S41 UP17_23670 PF01471 Putative peptidoglycan binding domain UP17_23670 PF17820 PDZ domain UP17_23675 PF00877 NlpC/P60 family UP17_23680 PF18075 FtsX extracellular domain UP17_23680 PF02687 FtsX-like permease family UP17_23685 PF00005 ABC transporter UP17_23700 PF00472 RF-1 domain UP17_23700 PF03462 PCRF domain UP17_23705 PF07517 SecA DEAD-like domain UP17_23705 PF01043 SecA preprotein cross-linking domain UP17_23705 PF07516 SecA Wing and Scaffold domain UP17_23705 PF02810 SEC-C motif UP17_23710 PF01381 Helix-turn-helix UP17_23710 PF08671 Anti-repressor SinI UP17_23715 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus UP17_23715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein UP17_23725 PF02561 Flagellar protein FliS UP17_23730 PF02465 Flagellar hook-associated protein 2 N-terminus UP17_23730 PF07196 Flagellin hook IN motif UP17_23730 PF07195 Flagellar hook-associated protein 2 C-terminus UP17_23735 PF03646 FlaG protein UP17_23740 PF00669 Bacterial flagellin N-terminal helical region UP17_23740 PF00700 Bacterial flagellin C-terminal helical region UP17_23745 PF02599 Global regulator protein family UP17_23750 PF02623 FliW protein UP17_23760 PF00700 Bacterial flagellin C-terminal helical region UP17_23760 PF00669 Bacterial flagellin N-terminal helical region UP17_23765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP17_23765 PF00460 Flagella basal body rod protein UP17_23775 PF04316 Anti-sigma-28 factor, FlgM UP17_23790 PF00271 Helicase conserved C-terminal domain UP17_23790 PF04851 Type III restriction enzyme, res subunit UP17_23795 PF02645 Uncharacterised protein, DegV family COG1307 UP17_23800 PF00196 Bacterial regulatory proteins, luxR family UP17_23800 PF00072 Response regulator receiver domain UP17_23805 PF07730 Histidine kinase UP17_23805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_23805 PF05384 Sensor protein DegS UP17_23810 PF01205 Uncharacterized protein family UPF0029 UP17_23810 PF09186 Domain of unknown function (DUF1949) UP17_23815 PF03816 Cell envelope-related transcriptional attenuator domain UP17_23820 PF00953 Glycosyl transferase family 4 UP17_23830 PF03808 Glycosyl transferase WecB/TagA/CpsF family UP17_23840 PF03023 Lipid II flippase MurJ UP17_23845 PF00534 Glycosyl transferases group 1 UP17_23845 PF13579 Glycosyl transferase 4-like domain UP17_23850 PF00005 ABC transporter UP17_23850 PF08239 Bacterial SH3 domain UP17_23855 PF01061 ABC-2 type transporter UP17_23865 PF00535 Glycosyl transferase family 2 UP17_23865 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 UP17_23875 PF01467 Cytidylyltransferase-like UP17_23880 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase UP17_23885 PF01476 LysM domain UP17_23885 PF00877 NlpC/P60 family UP17_23890 PF03816 Cell envelope-related transcriptional attenuator domain UP17_23895 PF00884 Sulfatase UP17_23910 PF07516 SecA Wing and Scaffold domain UP17_23910 PF01043 SecA preprotein cross-linking domain UP17_23910 PF07517 SecA DEAD-like domain UP17_23930 PF03717 Penicillin-binding Protein dimerisation domain UP17_23930 PF00905 Penicillin binding protein transpeptidase domain UP17_23930 PF05223 NTF2-like N-terminal transpeptidase domain UP17_23950 PF04434 SWIM zinc finger UP17_23955 PF00176 SNF2 family N-terminal domain UP17_23955 PF12419 SNF2 Helicase protein UP17_23955 PF00271 Helicase conserved C-terminal domain UP17_23960 PF01810 LysE type translocator UP17_23965 PF00155 Aminotransferase class I and II UP17_23965 PF00392 Bacterial regulatory proteins, gntR family UP17_23975 PF06280 Fn3-like domain UP17_23975 PF00746 LPXTG cell wall anchor motif UP17_23975 PF02225 PA domain UP17_23975 PF00082 Subtilase family UP17_23990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP17_23995 PF00005 ABC transporter UP17_23995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_24000 PF00005 ABC transporter UP17_24000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_24010 PF00436 Single-strand binding protein family UP17_24025 PF07977 FabA-like domain UP17_24035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP17_24035 PF00460 Flagella basal body rod protein UP17_24040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal UP17_24040 PF00460 Flagella basal body rod protein UP17_24050 PF12116 Stage III sporulation protein D UP17_24055 PF01551 Peptidase family M23 UP17_24065 PF08486 Stage II sporulation protein UP17_24070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP17_24080 PF06612 Protein of unknown function (DUF1146) UP17_24085 PF00361 Proton-conducting membrane transporter UP17_24090 PF00361 Proton-conducting membrane transporter UP17_24095 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus UP17_24095 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus UP17_24095 PF00361 Proton-conducting membrane transporter UP17_24100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L UP17_24105 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 UP17_24110 PF00037 4Fe-4S binding domain UP17_24115 PF00146 NADH dehydrogenase UP17_24120 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit UP17_24125 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit UP17_24130 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit UP17_24135 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 UP17_24140 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain UP17_24140 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain UP17_24145 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP17_24145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP17_24150 PF00231 ATP synthase UP17_24155 PF02874 ATP synthase alpha/beta family, beta-barrel domain UP17_24155 PF00306 ATP synthase alpha/beta chain, C terminal domain UP17_24155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP17_24160 PF00213 ATP synthase delta (OSCP) subunit UP17_24165 PF00430 ATP synthase B/B' CF(0) UP17_24170 PF00137 ATP synthase subunit C UP17_24175 PF00119 ATP synthase A chain UP17_24180 PF03899 ATP synthase I chain UP17_24185 PF00082 Subtilase family UP17_24185 PF05922 Peptidase inhibitor I9 UP17_24185 PF13860 FlgD Ig-like domain UP17_24185 PF02225 PA domain UP17_24190 PF02350 UDP-N-acetylglucosamine 2-epimerase UP17_24200 PF00464 Serine hydroxymethyltransferase UP17_24205 PF04260 Protein of unknown function (DUF436) UP17_24210 PF02502 Ribose/Galactose Isomerase UP17_24220 PF01451 Low molecular weight phosphotyrosine protein phosphatase UP17_24225 PF02659 Putative manganese efflux pump UP17_24230 PF03481 Putative GTP-binding controlling metal-binding UP17_24230 PF01300 Telomere recombination UP17_24235 PF09551 Stage II sporulation protein R (spore_II_R) UP17_24240 PF13847 Methyltransferase domain UP17_24240 PF17827 PrmC N-terminal domain UP17_24245 PF03462 PCRF domain UP17_24245 PF00472 RF-1 domain UP17_24255 PF00265 Thymidine kinase UP17_24260 PF01197 Ribosomal protein L31 UP17_24265 PF07498 Rho termination factor, N-terminal domain UP17_24265 PF07497 Rho termination factor, RNA-binding domain UP17_24265 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain UP17_24270 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded UP17_24275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) UP17_24280 PF00923 Transaldolase/Fructose-6-phosphate aldolase UP17_24285 PF01116 Fructose-bisphosphate aldolase class-II UP17_24290 PF00072 Response regulator receiver domain UP17_24295 PF10740 Domain of unknown function (DUF2529) UP17_24300 PF00117 Glutamine amidotransferase class-I UP17_24300 PF06418 CTP synthase N-terminus UP17_24305 PF05066 HB1, ASXL, restriction endonuclease HTH domain UP17_24310 PF01642 Methylmalonyl-CoA mutase UP17_24310 PF02310 B12 binding domain UP17_24320 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_24320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_24320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_24325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain UP17_24325 PF02770 Acyl-CoA dehydrogenase, middle domain UP17_24325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain UP17_24330 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UP17_24330 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain UP17_24335 PF00108 Thiolase, N-terminal domain UP17_24335 PF02803 Thiolase, C-terminal domain UP17_24340 PF13183 4Fe-4S dicluster domain UP17_24340 PF02754 Cysteine-rich domain UP17_24345 PF13091 PLD-like domain UP17_24350 PF03851 UV-endonuclease UvdE UP17_24355 PF00750 tRNA synthetases class I (R) UP17_24355 PF05746 DALR anticodon binding domain UP17_24355 PF03485 Arginyl tRNA synthetase N terminal domain UP17_24365 PF00491 Arginase family UP17_24370 PF17284 Spermidine synthase tetramerisation domain UP17_24375 PF00912 Transglycosylase UP17_24375 PF00905 Penicillin binding protein transpeptidase domain UP17_24380 PF08741 YwhD family UP17_24385 PF02163 Peptidase family M50 UP17_24390 PF01361 Tautomerase enzyme UP17_24400 PF01966 HD domain UP17_24405 PF07293 Protein of unknown function (DUF1450) UP17_24415 PF03099 Biotin/lipoate A/B protein ligase family UP17_24420 PF01515 Phosphate acetyl/butaryl transferase UP17_24430 PF09671 Spore coat protein (Spore_GerQ) UP17_24435 PF04241 Protein of unknown function (DUF423) UP17_24445 PF03167 Uracil DNA glycosylase superfamily UP17_24455 PF11181 Heat induced stress protein YflT UP17_24460 PF00899 ThiF family UP17_24465 PF02597 ThiS family UP17_24470 PF02391 MoaE protein UP17_24475 PF12804 MobA-like NTP transferase domain UP17_24480 PF08543 Phosphomethylpyrimidine kinase UP17_24485 PF08830 Protein of unknown function (DUF1806) UP17_24490 PF02585 GlcNAc-PI de-N-acetylase UP17_24495 PF07690 Major Facilitator Superfamily UP17_24500 PF01047 MarR family UP17_24505 PF07995 Glucose / Sorbosone dehydrogenase UP17_24520 PF04073 Aminoacyl-tRNA editing domain UP17_24525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain UP17_24525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain UP17_24545 PF01923 Cobalamin adenosyltransferase UP17_24555 PF00300 Histidine phosphatase superfamily (branch 1) UP17_24560 PF02654 Cobalamin-5-phosphate synthase UP17_24570 PF00155 Aminotransferase class I and II UP17_24575 PF03186 CobD/Cbib protein UP17_24580 PF00005 ABC transporter UP17_24585 PF01032 FecCD transport family UP17_24590 PF01497 Periplasmic binding protein UP17_24605 PF18416 N-acetylglucosamine binding protein domain 2 UP17_24605 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading UP17_24620 PF01131 DNA topoisomerase UP17_24620 PF01751 Toprim domain UP17_24625 PF12848 ABC transporter UP17_24625 PF00005 ABC transporter UP17_24635 PF01636 Phosphotransferase enzyme family UP17_24640 PF00270 DEAD/DEAH box helicase UP17_24640 PF00271 Helicase conserved C-terminal domain UP17_24645 PF00860 Permease family UP17_24670 PF01266 FAD dependent oxidoreductase UP17_24670 PF00355 Rieske [2Fe-2S] domain UP17_24675 PF09962 Uncharacterized conserved protein (DUF2196) UP17_24685 PF00551 Formyl transferase UP17_24685 PF01842 ACT domain UP17_24690 PF00497 Bacterial extracellular solute-binding proteins, family 3 UP17_24700 PF00005 ABC transporter UP17_24705 PF00749 tRNA synthetases class I (E and Q), catalytic domain UP17_24705 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain UP17_24710 PF01625 Peptide methionine sulfoxide reductase UP17_24710 PF01641 SelR domain UP17_24715 PF07662 Na+ dependent nucleoside transporter C-terminus UP17_24715 PF01773 Na+ dependent nucleoside transporter N-terminus UP17_24720 PF18719 ArlS sensor domain UP17_24720 PF00512 His Kinase A (phospho-acceptor) domain UP17_24720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_24725 PF00486 Transcriptional regulatory protein, C terminal UP17_24725 PF00072 Response regulator receiver domain UP17_24740 PF04341 Protein of unknown function, DUF485 UP17_24745 PF00474 Sodium:solute symporter family UP17_24760 PF12697 Alpha/beta hydrolase family UP17_24765 PF00375 Sodium:dicarboxylate symporter family UP17_24775 PF17785 PUA-like domain UP17_24775 PF10672 S-adenosylmethionine-dependent methyltransferase UP17_24785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family UP17_24785 PF03466 LysR substrate binding domain UP17_24790 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_24790 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain UP17_24800 PF00294 pfkB family carbohydrate kinase UP17_24810 PF04183 IucA / IucC family UP17_24810 PF06276 Ferric iron reductase FhuF-like transporter UP17_24815 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) UP17_24825 PF04183 IucA / IucC family UP17_24825 PF06276 Ferric iron reductase FhuF-like transporter UP17_24830 PF00282 Pyridoxal-dependent decarboxylase conserved domain UP17_24835 PF00202 Aminotransferase class-III UP17_24840 PF09154 Domain of unknown function (DUF1939) UP17_24840 PF00128 Alpha amylase, catalytic domain UP17_24845 PF01546 Peptidase family M20/M25/M40 UP17_24845 PF07687 Peptidase dimerisation domain UP17_24850 PF00199 Catalase UP17_24850 PF06628 Catalase-related immune-responsive UP17_24850 PF18011 C-terminal domain found in long catalases UP17_24855 PF00271 Helicase conserved C-terminal domain UP17_24855 PF00270 DEAD/DEAH box helicase UP17_24855 PF03880 DbpA RNA binding domain UP17_24860 PF03992 Antibiotic biosynthesis monooxygenase UP17_24865 PF04055 Radical SAM superfamily UP17_24870 PF02590 Predicted SPOUT methyltransferase UP17_24875 PF13180 PDZ domain UP17_24880 PF00753 Metallo-beta-lactamase superfamily UP17_24885 PF09648 YycH protein UP17_24895 PF13426 PAS domain UP17_24895 PF00512 His Kinase A (phospho-acceptor) domain UP17_24895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase UP17_24895 PF00672 HAMP domain UP17_24900 PF00072 Response regulator receiver domain UP17_24900 PF00486 Transcriptional regulatory protein, C terminal UP17_24905 PF01464 Transglycosylase SLT domain UP17_24905 PF10145 Phage-related minor tail protein UP17_24905 PF01551 Peptidase family M23 UP17_24930 PF00709 Adenylosuccinate synthetase UP17_24935 PF00772 DnaB-like helicase N terminal domain UP17_24935 PF03796 DnaB-like helicase C terminal domain UP17_24940 PF01281 Ribosomal protein L9, N-terminal domain UP17_24940 PF03948 Ribosomal protein L9, C-terminal domain UP17_24945 PF01368 DHH family UP17_24945 PF02272 DHHA1 domain UP17_24955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_24960 PF01084 Ribosomal protein S18 UP17_24965 PF00436 Single-strand binding protein family UP17_24970 PF01250 Ribosomal protein S6 UP17_24975 PF06071 Protein of unknown function (DUF933) UP17_24975 PF01926 50S ribosome-binding GTPase UP17_24980 PF06107 Bacterial protein of unknown function (DUF951) UP17_24985 PF00924 Mechanosensitive ion channel UP17_24990 PF06866 Protein of unknown function (DUF1256) UP17_25000 PF02195 ParB-like nuclease domain UP17_25000 PF17762 HTH domain found in ParB protein UP17_25005 PF13614 AAA domain UP17_25010 PF02195 ParB-like nuclease domain UP17_25010 PF17762 HTH domain found in ParB protein UP17_25015 PF02527 rRNA small subunit methyltransferase G UP17_25020 PF13932 GidA associated domain UP17_25020 PF01134 Glucose inhibited division protein A UP17_25025 PF01926 50S ribosome-binding GTPase UP17_25025 PF10396 GTP-binding protein TrmE N-terminus UP17_25025 PF12631 MnmE helical domain UP17_25030 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_25035 PF01424 R3H domain UP17_25035 PF14804 Jag N-terminus UP17_25040 PF02096 60Kd inner membrane protein UP17_25045 PF00825 Ribonuclease P UP17_25050 PF00468 Ribosomal protein L34 UP17_25075 PF00990 Diguanylate cyclase, GGDEF domain UP17_25075 PF05230 MASE2 domain UP17_25095 PF08359 YsiA-like protein, C-terminal region UP17_25095 PF00440 Bacterial regulatory proteins, tetR family UP17_25100 PF00171 Aldehyde dehydrogenase family UP17_25135 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_25135 PF01348 Type II intron maturase UP17_25150 PF00005 ABC transporter UP17_25155 PF00144 Beta-lactamase UP17_25160 PF13333 Integrase core domain UP17_25160 PF00665 Integrase core domain UP17_25160 PF13276 HTH-like domain UP17_25180 PF03551 Transcriptional regulator PadR-like family UP17_25210 PF00583 Acetyltransferase (GNAT) family UP17_25220 PF00155 Aminotransferase class I and II UP17_25220 PF00392 Bacterial regulatory proteins, gntR family UP17_25230 PF10997 Alternate to MurJ UP17_25235 PF06445 GyrI-like small molecule binding domain UP17_25235 PF13411 MerR HTH family regulatory protein UP17_25240 PF04474 Protein of unknown function (DUF554) UP17_25260 PF12833 Helix-turn-helix domain UP17_25260 PF06445 GyrI-like small molecule binding domain UP17_25280 PF00589 Phage integrase family UP17_25280 PF13495 Phage integrase, N-terminal SAM-like domain UP17_25290 PF00565 Staphylococcal nuclease homologue UP17_25290 PF05901 Excalibur calcium-binding domain UP17_25325 PF07728 AAA domain (dynein-related subfamily) UP17_25325 PF12102 Domain of unknown function (DUF3578) UP17_25340 PF01381 Helix-turn-helix UP17_25355 PF00145 C-5 cytosine-specific DNA methylase UP17_25360 PF00145 C-5 cytosine-specific DNA methylase UP17_25430 PF02899 Phage integrase, N-terminal SAM-like domain UP17_25430 PF00589 Phage integrase family UP17_25435 PF02661 Fic/DOC family UP17_25455 PF07992 Pyridine nucleotide-disulphide oxidoreductase UP17_25455 PF13192 Thioredoxin domain UP17_25460 PF00578 AhpC/TSA family UP17_25465 PF00324 Amino acid permease UP17_25475 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain UP17_25475 PF01276 Orn/Lys/Arg decarboxylase, major domain UP17_25480 PF02525 Flavodoxin-like fold UP17_25485 PF01638 HxlR-like helix-turn-helix UP17_25490 PF14602 Hexapeptide repeat of succinyl-transferase UP17_25490 PF12464 Maltose acetyltransferase UP17_25500 PF01695 IstB-like ATP binding protein UP17_25535 PF01554 MatE UP17_25540 PF00005 ABC transporter UP17_25540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_25545 PF00005 ABC transporter UP17_25545 PF08352 Oligopeptide/dipeptide transporter, C-terminal region UP17_25550 PF00528 Binding-protein-dependent transport system inner membrane component UP17_25555 PF00528 Binding-protein-dependent transport system inner membrane component UP17_25560 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle UP17_25580 PF16403 Domain of unknown function (DUF5011) UP17_25585 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) UP17_25585 PF01348 Type II intron maturase UP17_25595 PF04542 Sigma-70 region 2 UP17_25595 PF08281 Sigma-70, region 4 UP17_25630 PF01609 Transposase DDE domain UP17_25670 PF00877 NlpC/P60 family UP17_25785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase UP17_25785 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UP17_25790 PF00111 2Fe-2S iron-sulfur cluster binding domain UP17_25790 PF01799 [2Fe-2S] binding domain UP17_25795 PF00941 FAD binding domain in molybdopterin dehydrogenase UP17_25835 PF00589 Phage integrase family UP17_25835 PF02899 Phage integrase, N-terminal SAM-like domain UP17_25845 PF00269 Small, acid-soluble spore proteins, alpha/beta type