UP17_00005 SM00382 ATPases associated with a variety of cellular activities UP17_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain UP17_00010 SM00480 DNA polymerase III beta subunit UP17_00030 SM00387 Histidine kinase-like ATPases UP17_00030 SM00433 TopoisomeraseII UP17_00035 SM00434 DNA Topoisomerase IV UP17_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_00070 SM01240 UP17_00070 UP17_00075 SM00936 Penicillin-binding protein 5, C-terminal domain UP17_00130 SM00493 UP17_00130 UP17_00215 SM00465 GIY-YIG type nucleases (URI domain) UP17_00225 SM00966 SpoVT / AbrB like domain UP17_00240 SM01208 UP17_00240 UP17_00245 SM00493 UP17_00245 UP17_00250 SM00650 Ribosomal RNA adenine dimethylases UP17_00295 SM01400 UP17_00295 UP17_00320 SM00487 DEAD-like helicases superfamily UP17_00320 SM00490 helicase superfamily c-terminal domain UP17_00320 SM00982 UP17_00320 UP17_00320 SM01058 CarD-like/TRCF domain UP17_00325 SM00966 SpoVT / AbrB like domain UP17_00340 SM00363 S4 RNA-binding domain UP17_00360 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_00375 SM00331 Sigma factor PP2C-like phosphatases UP17_00375 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain UP17_00385 SM00220 Serine/Threonine protein kinases, catalytic domain UP17_00390 SM00977 TilS substrate C-terminal domain UP17_00430 SM00905 Dihydroneopterin aldolase UP17_00440 SM00530 Helix-turn-helix XRE-family like proteins UP17_00545 SM00382 ATPases associated with a variety of cellular activities UP17_00545 SM01086 C-terminal, D2-small domain, of ClpB protein UP17_00550 SM00382 ATPases associated with a variety of cellular activities UP17_00560 SM00670 Large family of predicted nucleotide-binding domains UP17_00590 SM00840 UP17_00590 UP17_00595 SM00535 Ribonuclease III family UP17_00600 SM00967 RNA 2'-O ribose methyltransferase substrate binding UP17_00610 SM00421 helix_turn_helix, Lux Regulon UP17_00620 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. UP17_00620 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. UP17_00625 SM00649 Ribosomal protein L11/L12 UP17_00655 SM00663 RNA polymerase I subunit A N-terminus UP17_00675 SM00838 Elongation factor G C-terminus UP17_00675 SM00889 Elongation factor G, domain IV UP17_00685 SM01403 UP17_00685 UP17_00705 SM01382 UP17_00705 UP17_00705 SM01383 UP17_00705 UP17_00720 SM00322 K homology RNA-binding domain UP17_00740 SM01374 UP17_00740 UP17_00745 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. UP17_00800 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_00820 SM00662 RNA polymerases D UP17_00830 SM00382 ATPases associated with a variety of cellular activities UP17_00835 SM00382 ATPases associated with a variety of cellular activities UP17_00870 SM00646 UP17_00870 UP17_00885 SM01251 UP17_00885 UP17_01015 SM00387 Histidine kinase-like ATPases UP17_01015 SM00388 His Kinase A (phosphoacceptor) domain UP17_01020 SM00448 cheY-homologous receiver domain UP17_01020 SM00862 Transcriptional regulatory protein, C terminal UP17_01025 SM00382 ATPases associated with a variety of cellular activities UP17_01040 SM00357 Cold shock protein domain UP17_01050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_01095 SM00046 Diacylglycerol kinase catalytic domain (presumed) UP17_01115 SM00530 Helix-turn-helix XRE-family like proteins UP17_01120 SM00382 ATPases associated with a variety of cellular activities UP17_01165 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_01165 SM00866 UP17_01165 UP17_01185 SM00382 ATPases associated with a variety of cellular activities UP17_01205 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_01230 SM00422 helix_turn_helix, mercury resistance UP17_01235 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_01235 SM01091 Transporter associated domain UP17_01240 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. UP17_01240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_01240 SM00387 Histidine kinase-like ATPases UP17_01240 SM00388 His Kinase A (phosphoacceptor) domain UP17_01240 SM00448 cheY-homologous receiver domain UP17_01245 SM00138 Methyltransferase, chemotaxis proteins UP17_01250 SM00331 Sigma factor PP2C-like phosphatases UP17_01250 SM00448 cheY-homologous receiver domain UP17_01305 SM00046 Diacylglycerol kinase catalytic domain (presumed) UP17_01340 SM00331 Sigma factor PP2C-like phosphatases UP17_01345 SM00487 DEAD-like helicases superfamily UP17_01345 SM00490 helicase superfamily c-terminal domain UP17_01375 SM01005 Alanine racemase, C-terminal domain UP17_01405 SM00331 Sigma factor PP2C-like phosphatases UP17_01425 SM00331 Sigma factor PP2C-like phosphatases UP17_01430 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_01430 SM00732 Likely ribonuclease with RNase H fold. UP17_01435 SM00731 SprT homologues. UP17_01535 SM00382 ATPases associated with a variety of cellular activities UP17_01545 SM00881 CoA binding domain UP17_01560 SM00883 Chaperonin 10 Kd subunit UP17_01575 SM00387 Histidine kinase-like ATPases UP17_01580 SM00448 cheY-homologous receiver domain UP17_01595 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_01595 SM00895 UP17_01595 UP17_01610 SM01350 UP17_01610 UP17_01645 SM01059 Chloramphenicol acetyltransferase UP17_01795 SM00091 PAS domain UP17_01795 SM00382 ATPases associated with a variety of cellular activities UP17_01800 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_01800 SM00382 ATPases associated with a variety of cellular activities UP17_01865 SM00460 Transglutaminase/protease-like homologues UP17_01880 SM01061 CAT RNA binding domain UP17_01950 SM01001 AIR carboxylase UP17_01960 SM00998 Adenylosuccinate lyase C-terminus UP17_01975 SM01211 UP17_01975 UP17_02000 SM00798 AICARFT/IMPCHase bienzyme UP17_02000 SM00851 MGS-like domain UP17_02005 SM01209 UP17_02005 UP17_02005 SM01210 UP17_02005 UP17_02040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 UP17_02040 SM00292 breast cancer carboxy-terminal domain UP17_02040 SM00532 Ligase N family UP17_02060 SM00845 GatB domain UP17_02070 SM00046 Diacylglycerol kinase catalytic domain (presumed) UP17_02180 SM00091 PAS domain UP17_02180 SM00387 Histidine kinase-like ATPases UP17_02180 SM00388 His Kinase A (phosphoacceptor) domain UP17_02210 SM00829 Enoylreductase UP17_02215 SM00382 ATPases associated with a variety of cellular activities UP17_02215 SM00448 cheY-homologous receiver domain UP17_02220 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. UP17_02220 SM00387 Histidine kinase-like ATPases UP17_02220 SM00388 His Kinase A (phosphoacceptor) domain UP17_02245 SM00448 cheY-homologous receiver domain UP17_02245 SM00862 Transcriptional regulatory protein, C terminal UP17_02250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_02250 SM00387 Histidine kinase-like ATPases UP17_02250 SM00388 His Kinase A (phosphoacceptor) domain UP17_02260 SM00382 ATPases associated with a variety of cellular activities UP17_02305 SM00354 helix_turn _helix lactose operon repressor UP17_02330 SM00363 S4 RNA-binding domain UP17_02360 SM00382 ATPases associated with a variety of cellular activities UP17_02380 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_02455 SM00382 ATPases associated with a variety of cellular activities UP17_02460 SM00382 ATPases associated with a variety of cellular activities UP17_02490 SM00938 Nitrogen regulatory protein P-II UP17_02500 SM00850 LytTr DNA-binding domain UP17_02530 SM00257 Lysin motif UP17_02600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain UP17_02610 SM00091 PAS domain UP17_02610 SM00387 Histidine kinase-like ATPases UP17_02610 SM00388 His Kinase A (phosphoacceptor) domain UP17_02615 SM00487 DEAD-like helicases superfamily UP17_02615 SM00490 helicase superfamily c-terminal domain UP17_02725 SM00852 Probable molybdopterin binding domain UP17_02800 SM00478 endonuclease III UP17_02975 SM00422 helix_turn_helix, mercury resistance UP17_03090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_03120 SM00849 Metallo-beta-lactamase superfamily UP17_03210 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_03255 SM00342 helix_turn_helix, arabinose operon control protein UP17_03295 SM00422 helix_turn_helix, mercury resistance UP17_03295 SM00871 Bacterial transcription activator, effector binding domain UP17_03305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_03305 SM00450 Rhodanese Homology Domain UP17_03345 SM00988 UreE urease accessory protein, N-terminal domain UP17_03390 SM00382 ATPases associated with a variety of cellular activities UP17_03470 SM00382 ATPases associated with a variety of cellular activities UP17_03480 SM00382 ATPases associated with a variety of cellular activities UP17_03560 SM00382 ATPases associated with a variety of cellular activities UP17_03575 SM00387 Histidine kinase-like ATPases UP17_03575 SM00388 His Kinase A (phosphoacceptor) domain UP17_03580 SM00448 cheY-homologous receiver domain UP17_03580 SM00862 Transcriptional regulatory protein, C terminal UP17_03590 SM00382 ATPases associated with a variety of cellular activities UP17_03600 SM00062 Bacterial periplasmic substrate-binding proteins UP17_03700 SM00062 Bacterial periplasmic substrate-binding proteins UP17_03700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. UP17_03710 SM00382 ATPases associated with a variety of cellular activities UP17_03790 SM00478 endonuclease III UP17_03790 SM00525 UP17_03790 UP17_03820 SM00382 ATPases associated with a variety of cellular activities UP17_03875 SM00382 ATPases associated with a variety of cellular activities UP17_04280 SM00914 UP17_04280 UP17_04285 SM00091 PAS domain UP17_04285 SM00382 ATPases associated with a variety of cellular activities UP17_04300 SM01007 Class II Aldolase and Adducin N-terminal domain UP17_04340 SM00450 Rhodanese Homology Domain UP17_04340 SM00849 Metallo-beta-lactamase superfamily UP17_04350 SM00382 ATPases associated with a variety of cellular activities UP17_04375 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_04375 SM00924 MgtE intracellular N domain UP17_04380 SM00829 Enoylreductase UP17_04400 SM00873 B3/4 domain UP17_04405 SM00567 E-Z type HEAT repeats UP17_04435 SM00448 cheY-homologous receiver domain UP17_04440 SM00387 Histidine kinase-like ATPases UP17_04455 SM00763 PrkA AAA domain UP17_04480 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_04480 SM00895 UP17_04480 UP17_04565 SM00382 ATPases associated with a variety of cellular activities UP17_04580 SM00257 Lysin motif UP17_04615 SM01002 Alanine dehydrogenase/PNT, C-terminal domain UP17_04615 SM01003 Alanine dehydrogenase/PNT, N-terminal domain UP17_04695 SM00631 UP17_04695 UP17_04725 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain UP17_04740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_04750 SM00226 Low molecular weight phosphatase family UP17_04780 SM00448 cheY-homologous receiver domain UP17_04780 SM00862 Transcriptional regulatory protein, C terminal UP17_04785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_04785 SM00387 Histidine kinase-like ATPases UP17_04785 SM00388 His Kinase A (phosphoacceptor) domain UP17_04805 SM00344 helix_turn_helix ASNC type UP17_04995 SM00448 cheY-homologous receiver domain UP17_04995 SM00862 Transcriptional regulatory protein, C terminal UP17_05000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_05000 SM00387 Histidine kinase-like ATPases UP17_05000 SM00388 His Kinase A (phosphoacceptor) domain UP17_05045 SM00357 Cold shock protein domain UP17_05065 SM01131 UP17_05065 UP17_05100 SM00450 Rhodanese Homology Domain UP17_05120 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_05125 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_05140 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_05140 SM01091 Transporter associated domain UP17_05160 SM01091 Transporter associated domain UP17_05165 SM00387 Histidine kinase-like ATPases UP17_05165 SM00388 His Kinase A (phosphoacceptor) domain UP17_05215 SM00861 Transketolase, pyrimidine binding domain UP17_05245 SM00344 helix_turn_helix ASNC type UP17_05255 SM00344 helix_turn_helix ASNC type UP17_05270 SM01060 UP17_05270 UP17_05305 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_05325 SM00382 ATPases associated with a variety of cellular activities UP17_05330 SM00382 ATPases associated with a variety of cellular activities UP17_05370 SM00849 Metallo-beta-lactamase superfamily UP17_05515 SM00382 ATPases associated with a variety of cellular activities UP17_05525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_05565 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_05595 SM00382 ATPases associated with a variety of cellular activities UP17_05640 SM00849 Metallo-beta-lactamase superfamily UP17_05655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_05675 SM00914 UP17_05675 UP17_05780 SM00642 Alpha-amylase domain UP17_05790 SM00642 Alpha-amylase domain UP17_05795 SM00642 Alpha-amylase domain UP17_05800 SM00354 helix_turn _helix lactose operon repressor UP17_05850 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_05855 SM00100 Cyclic nucleotide-monophosphate binding domain UP17_05855 SM00419 helix_turn_helix, cAMP Regulatory protein UP17_05860 SM00859 Semialdehyde dehydrogenase, NAD binding domain UP17_05880 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain UP17_05885 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP17_05900 SM00346 helix_turn_helix isocitrate lyase regulation UP17_05925 SM00382 ATPases associated with a variety of cellular activities UP17_05925 SM01086 C-terminal, D2-small domain, of ClpB protein UP17_05960 SM00825 Beta-ketoacyl synthase UP17_06010 SM00155 Phospholipase D. Active site motifs. UP17_06045 SM01118 UP17_06045 UP17_06050 SM00954 Region found in RelA / SpoT proteins UP17_06070 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_06070 SM00924 MgtE intracellular N domain UP17_06210 SM00382 ATPases associated with a variety of cellular activities UP17_06220 SM00062 Bacterial periplasmic substrate-binding proteins UP17_06260 SM00631 UP17_06260 UP17_06265 SM00849 Metallo-beta-lactamase superfamily UP17_06310 SM00422 helix_turn_helix, mercury resistance UP17_06355 SM00382 ATPases associated with a variety of cellular activities UP17_06405 SM00357 Cold shock protein domain UP17_06500 SM00382 ATPases associated with a variety of cellular activities UP17_06505 SM00382 ATPases associated with a variety of cellular activities UP17_06580 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_06585 SM00382 ATPases associated with a variety of cellular activities UP17_06595 SM00357 Cold shock protein domain UP17_06610 SM00387 Histidine kinase-like ATPases UP17_06615 SM00448 cheY-homologous receiver domain UP17_06620 SM00919 Malic enzyme, NAD binding domain UP17_06620 SM01274 UP17_06620 UP17_06675 SM00387 Histidine kinase-like ATPases UP17_06675 SM00388 His Kinase A (phosphoacceptor) domain UP17_06710 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_06720 SM00091 PAS domain UP17_06720 SM00387 Histidine kinase-like ATPases UP17_06720 SM00388 His Kinase A (phosphoacceptor) domain UP17_06740 SM00387 Histidine kinase-like ATPases UP17_06740 SM00388 His Kinase A (phosphoacceptor) domain UP17_06745 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_06775 SM00318 Staphylococcal nuclease homologues UP17_06780 SM00382 ATPases associated with a variety of cellular activities UP17_06835 SM00260 Two component signalling adaptor domain UP17_06835 SM00448 cheY-homologous receiver domain UP17_06870 SM00052 Putative diguanylate phosphodiesterase UP17_06890 SM00849 Metallo-beta-lactamase superfamily UP17_06930 SM00849 Metallo-beta-lactamase superfamily UP17_06960 SM00861 Transketolase, pyrimidine binding domain UP17_07060 SM00838 Elongation factor G C-terminus UP17_07090 SM00670 Large family of predicted nucleotide-binding domains UP17_07105 SM00878 Biotin carboxylase C-terminal domain UP17_07215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_07285 SM00740 UP17_07285 UP17_07295 SM00740 UP17_07295 UP17_07345 SM00842 Cell division protein FtsA UP17_07350 SM00864 Tubulin/FtsZ family, GTPase domain UP17_07350 SM00865 Tubulin/FtsZ family, C-terminal domain UP17_07395 SM00363 S4 RNA-binding domain UP17_07415 SM00363 S4 RNA-binding domain UP17_07440 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain UP17_07445 SM00851 MGS-like domain UP17_07445 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain UP17_07460 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family UP17_07475 SM00831 Cation transporter/ATPase, N-terminus UP17_07490 SM00072 Guanylate kinase homologues. UP17_07495 SM01409 UP17_07495 UP17_07505 SM00487 DEAD-like helicases superfamily UP17_07505 SM00490 helicase superfamily c-terminal domain UP17_07530 SM00331 Sigma factor PP2C-like phosphatases UP17_07530 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain UP17_07535 SM00220 Serine/Threonine protein kinases, catalytic domain UP17_07535 SM00740 UP17_07535 UP17_07550 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain UP17_07570 SM01120 UP17_07570 UP17_07570 SM01121 UP17_07570 UP17_07585 SM00487 DEAD-like helicases superfamily UP17_07585 SM00490 helicase superfamily c-terminal domain UP17_07600 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. UP17_07605 SM00822 UP17_07605 UP17_07615 SM00358 Double-stranded RNA binding motif UP17_07615 SM00535 Ribonuclease III family UP17_07620 SM00968 SMC proteins Flexible Hinge Domain UP17_07625 SM00382 ATPases associated with a variety of cellular activities UP17_07625 SM00962 SRP54-type protein, GTPase domain UP17_07625 SM00963 SRP54-type protein, helical bundle domain UP17_07635 SM00382 ATPases associated with a variety of cellular activities UP17_07635 SM00962 SRP54-type protein, GTPase domain UP17_07635 SM00963 SRP54-type protein, helical bundle domain UP17_07715 SM00881 CoA binding domain UP17_07725 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain UP17_07725 SM00437 Bacterial DNA topoisomerase I DNA-binding domain UP17_07725 SM00493 UP17_07725 UP17_07745 SM00382 ATPases associated with a variety of cellular activities UP17_07745 SM01086 C-terminal, D2-small domain, of ClpB protein UP17_07785 SM00382 ATPases associated with a variety of cellular activities UP17_07840 SM00448 cheY-homologous receiver domain UP17_07875 SM00962 SRP54-type protein, GTPase domain UP17_07885 SM00448 cheY-homologous receiver domain UP17_07890 SM00073 Histidine Phosphotransfer domain UP17_07890 SM00260 Two component signalling adaptor domain UP17_07890 SM00387 Histidine kinase-like ATPases UP17_07890 SM01231 UP17_07890 UP17_07895 SM00260 Two component signalling adaptor domain UP17_07960 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_07970 SM00479 UP17_07970 UP17_07970 SM00481 DNA polymerase alpha chain like domain UP17_07980 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_07980 SM00322 K homology RNA-binding domain UP17_08015 SM00904 Riboflavin kinase UP17_08020 SM01387 UP17_08020 UP17_08025 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_08025 SM00322 K homology RNA-binding domain UP17_08060 SM00859 Semialdehyde dehydrogenase, NAD binding domain UP17_08070 SM01130 UP17_08070 UP17_08075 SM00849 Metallo-beta-lactamase superfamily UP17_08090 SM00382 ATPases associated with a variety of cellular activities UP17_08090 SM00843 UP17_08090 UP17_08100 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_08100 SM00866 UP17_08100 UP17_08110 SM00382 ATPases associated with a variety of cellular activities UP17_08150 SM00530 Helix-turn-helix XRE-family like proteins UP17_08160 SM00852 Probable molybdopterin binding domain UP17_08170 SM00382 ATPases associated with a variety of cellular activities UP17_08175 SM00322 K homology RNA-binding domain UP17_08175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_08210 SM00829 Enoylreductase UP17_08215 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_08240 SM00533 DNA-binding domain of DNA mismatch repair MUTS family UP17_08240 SM00534 ATPase domain of DNA mismatch repair MUTS family UP17_08245 SM00853 MutL C terminal dimerisation domain UP17_08245 SM01340 UP17_08245 UP17_08275 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_08275 SM00866 UP17_08275 UP17_08325 SM00860 SMI1 / KNR4 family UP17_08330 SM00448 cheY-homologous receiver domain UP17_08330 SM00862 Transcriptional regulatory protein, C terminal UP17_08350 SM00387 Histidine kinase-like ATPases UP17_08365 SM00382 ATPases associated with a variety of cellular activities UP17_08385 SM00422 helix_turn_helix, mercury resistance UP17_08390 SM01230 UP17_08390 UP17_08470 SM00382 ATPases associated with a variety of cellular activities UP17_08485 SM00382 ATPases associated with a variety of cellular activities UP17_08495 SM00448 cheY-homologous receiver domain UP17_08495 SM00862 Transcriptional regulatory protein, C terminal UP17_08500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_08500 SM00387 Histidine kinase-like ATPases UP17_08500 SM00388 His Kinase A (phosphoacceptor) domain UP17_08515 SM00354 helix_turn _helix lactose operon repressor UP17_08525 SM00640 Glycosyl hydrolases family 32 UP17_08775 SM00382 ATPases associated with a variety of cellular activities UP17_08865 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain UP17_08930 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_08930 SM00866 UP17_08930 UP17_08990 SM00870 UP17_08990 UP17_09100 SM00387 Histidine kinase-like ATPases UP17_09110 SM00382 ATPases associated with a variety of cellular activities UP17_09115 SM00422 helix_turn_helix, mercury resistance UP17_09220 SM00642 Alpha-amylase domain UP17_09225 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_09225 SM00866 UP17_09225 UP17_09255 SM00257 Lysin motif UP17_09255 SM00646 UP17_09255 UP17_09265 SM00530 Helix-turn-helix XRE-family like proteins UP17_09300 SM00857 Resolvase, N terminal domain UP17_09310 SM00861 Transketolase, pyrimidine binding domain UP17_09355 SM00914 UP17_09355 UP17_09450 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_09500 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain UP17_09550 SM00450 Rhodanese Homology Domain UP17_09555 SM00450 Rhodanese Homology Domain UP17_09560 SM00450 Rhodanese Homology Domain UP17_09570 SM00450 Rhodanese Homology Domain UP17_09570 SM00849 Metallo-beta-lactamase superfamily UP17_09590 SM00422 helix_turn_helix, mercury resistance UP17_09640 SM00382 ATPases associated with a variety of cellular activities UP17_09760 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_09760 SM00866 UP17_09760 UP17_09780 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_09785 SM00382 ATPases associated with a variety of cellular activities UP17_09790 SM00382 ATPases associated with a variety of cellular activities UP17_09795 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_09805 SM00861 Transketolase, pyrimidine binding domain UP17_09830 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_09865 SM00342 helix_turn_helix, arabinose operon control protein UP17_09910 SM00796 Allophanate hydrolase subunit 1 UP17_09915 SM00797 Allophanate hydrolase subunit 2 UP17_09925 SM00926 Molybdopterin oxidoreductase Fe4S4 domain UP17_09955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) UP17_09955 SM00091 PAS domain UP17_09965 SM00421 helix_turn_helix, Lux Regulon UP17_09965 SM00448 cheY-homologous receiver domain UP17_09975 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) UP17_09975 SM00091 PAS domain UP17_09975 SM00387 Histidine kinase-like ATPases UP17_09980 SM00346 helix_turn_helix isocitrate lyase regulation UP17_10115 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_10200 SM00822 UP17_10200 UP17_10225 SM00878 Biotin carboxylase C-terminal domain UP17_10315 SM00382 ATPases associated with a variety of cellular activities UP17_10320 SM00420 helix_turn_helix, Deoxyribose operon repressor UP17_10320 SM01134 UP17_10320 UP17_10375 SM00382 ATPases associated with a variety of cellular activities UP17_10470 SM00411 bacterial (prokaryotic) histone like domain UP17_10490 SM00346 helix_turn_helix isocitrate lyase regulation UP17_10520 SM00859 Semialdehyde dehydrogenase, NAD binding domain UP17_10670 SM01207 UP17_10670 UP17_10675 SM00881 CoA binding domain UP17_10680 SM00387 Histidine kinase-like ATPases UP17_10680 SM00433 TopoisomeraseII UP17_10685 SM00434 DNA Topoisomerase IV UP17_10765 SM00448 cheY-homologous receiver domain UP17_10765 SM00850 LytTr DNA-binding domain UP17_10770 SM00793 Accessory gene regulator B UP17_10790 SM00829 Enoylreductase UP17_10830 SM00849 Metallo-beta-lactamase superfamily UP17_10840 SM00422 helix_turn_helix, mercury resistance UP17_10850 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_10875 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_10875 SM00866 UP17_10875 UP17_10900 SM00346 helix_turn_helix isocitrate lyase regulation UP17_11015 SM00823 Phosphopantetheine attachment site UP17_11020 SM00823 Phosphopantetheine attachment site UP17_11100 SM00878 Biotin carboxylase C-terminal domain UP17_11430 SM00422 helix_turn_helix, mercury resistance UP17_11480 SM00344 helix_turn_helix ASNC type UP17_11540 SM00530 Helix-turn-helix XRE-family like proteins UP17_11600 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. UP17_11600 SM00267 diguanylate cyclase UP17_11605 SM00490 helicase superfamily c-terminal domain UP17_11725 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain UP17_11830 SM00387 Histidine kinase-like ATPases UP17_11830 SM00388 His Kinase A (phosphoacceptor) domain UP17_11890 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_11930 SM00861 Transketolase, pyrimidine binding domain UP17_11950 SM00382 ATPases associated with a variety of cellular activities UP17_11995 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_12025 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UP17_12070 SM00382 ATPases associated with a variety of cellular activities UP17_12085 SM00382 ATPases associated with a variety of cellular activities UP17_12085 SM00448 cheY-homologous receiver domain UP17_12090 SM00062 Bacterial periplasmic substrate-binding proteins UP17_12090 SM00091 PAS domain UP17_12090 SM00387 Histidine kinase-like ATPases UP17_12090 SM00388 His Kinase A (phosphoacceptor) domain UP17_12105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_12125 SM01065 Starch binding domain UP17_12225 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_12225 SM00895 UP17_12225 UP17_12280 SM00382 ATPases associated with a variety of cellular activities UP17_12285 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_12305 SM00382 ATPases associated with a variety of cellular activities UP17_12305 SM01086 C-terminal, D2-small domain, of ClpB protein UP17_12360 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_12360 SM00382 ATPases associated with a variety of cellular activities UP17_12385 SM00900 UP17_12385 UP17_12390 SM00387 Histidine kinase-like ATPases UP17_12390 SM00388 His Kinase A (phosphoacceptor) domain UP17_12395 SM00448 cheY-homologous receiver domain UP17_12395 SM00862 Transcriptional regulatory protein, C terminal UP17_12420 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase UP17_12430 SM00530 Helix-turn-helix XRE-family like proteins UP17_12465 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_12520 SM00382 ATPases associated with a variety of cellular activities UP17_12570 SM00091 PAS domain UP17_12570 SM00382 ATPases associated with a variety of cellular activities UP17_12580 SM00631 UP17_12580 UP17_12615 SM00014 Acid phosphatase homologues UP17_12660 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. UP17_12665 SM00327 von Willebrand factor (vWF) type A domain UP17_12720 SM00984 UDP binding domain UP17_12835 SM00855 Phosphoglycerate mutase family UP17_12860 SM00155 Phospholipase D. Active site motifs. UP17_12880 SM00642 Alpha-amylase domain UP17_12995 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_13020 SM00382 ATPases associated with a variety of cellular activities UP17_13060 SM00421 helix_turn_helix, Lux Regulon UP17_13165 SM00357 Cold shock protein domain UP17_13175 SM00382 ATPases associated with a variety of cellular activities UP17_13180 SM00382 ATPases associated with a variety of cellular activities UP17_13215 SM00257 Lysin motif UP17_13220 SM00028 Tetratricopeptide repeats UP17_13220 SM00530 Helix-turn-helix XRE-family like proteins UP17_13225 SM00479 UP17_13225 UP17_13265 SM00387 Histidine kinase-like ATPases UP17_13265 SM00388 His Kinase A (phosphoacceptor) domain UP17_13270 SM00382 ATPases associated with a variety of cellular activities UP17_13295 SM00829 Enoylreductase UP17_13365 SM00382 ATPases associated with a variety of cellular activities UP17_13380 SM00257 Lysin motif UP17_13380 SM00636 UP17_13380 UP17_13390 SM00155 Phospholipase D. Active site motifs. UP17_13410 SM00870 UP17_13410 UP17_13440 SM00903 Flavin reductase like domain UP17_13535 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_13540 SM00849 Metallo-beta-lactamase superfamily UP17_13550 SM00382 ATPases associated with a variety of cellular activities UP17_13570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) UP17_13570 SM00091 PAS domain UP17_13570 SM00387 Histidine kinase-like ATPases UP17_13570 SM00388 His Kinase A (phosphoacceptor) domain UP17_13590 SM00341 Helicase and RNase D C-terminal UP17_13590 SM00487 DEAD-like helicases superfamily UP17_13590 SM00490 helicase superfamily c-terminal domain UP17_13590 SM00956 UP17_13590 UP17_13595 SM00257 Lysin motif UP17_13615 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_13625 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain UP17_13660 SM00382 ATPases associated with a variety of cellular activities UP17_13690 SM00382 ATPases associated with a variety of cellular activities UP17_13700 SM00420 helix_turn_helix, Deoxyribose operon repressor UP17_13700 SM01134 UP17_13700 UP17_13705 SM00640 Glycosyl hydrolases family 32 UP17_13720 SM00342 helix_turn_helix, arabinose operon control protein UP17_13720 SM00448 cheY-homologous receiver domain UP17_13725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_13870 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_13870 SM00895 UP17_13870 UP17_13920 SM00244 prohibitin homologues UP17_13950 SM00257 Lysin motif UP17_13980 SM00420 helix_turn_helix, Deoxyribose operon repressor UP17_13980 SM01134 UP17_13980 UP17_13990 SM00861 Transketolase, pyrimidine binding domain UP17_14005 SM01018 B12 binding domain UP17_14020 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen UP17_14045 SM00947 Carbonic anhydrase UP17_14115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_14115 SM00387 Histidine kinase-like ATPases UP17_14115 SM00388 His Kinase A (phosphoacceptor) domain UP17_14120 SM00448 cheY-homologous receiver domain UP17_14120 SM00862 Transcriptional regulatory protein, C terminal UP17_14140 SM00833 Cobalamin synthesis protein cobW C-terminal domain UP17_14150 SM01007 Class II Aldolase and Adducin N-terminal domain UP17_14195 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_14195 SM00245 tail specific protease UP17_14265 SM00091 PAS domain UP17_14265 SM00382 ATPases associated with a variety of cellular activities UP17_14280 SM00882 Coenzyme A transferase UP17_14285 SM00882 Coenzyme A transferase UP17_14420 SM00567 E-Z type HEAT repeats UP17_14420 SM00932 Scaffold protein Nfu/NifU N terminal UP17_14425 SM00382 ATPases associated with a variety of cellular activities UP17_14430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_14465 SM00529 Helix-turn-helix diphteria tox regulatory element UP17_14470 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain UP17_14470 SM00437 Bacterial DNA topoisomerase I DNA-binding domain UP17_14470 SM00493 UP17_14470 UP17_14475 SM00530 Helix-turn-helix XRE-family like proteins UP17_14610 SM00422 helix_turn_helix, mercury resistance UP17_14640 SM00448 cheY-homologous receiver domain UP17_14645 SM00091 PAS domain UP17_14645 SM00387 Histidine kinase-like ATPases UP17_14665 SM00257 Lysin motif UP17_14690 SM00849 Metallo-beta-lactamase superfamily UP17_14720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_14875 SM00346 helix_turn_helix isocitrate lyase regulation UP17_14895 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_14940 SM00631 UP17_14940 UP17_14995 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase UP17_15040 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs UP17_15040 SM00475 5'-3' exonuclease UP17_15045 SM00450 Rhodanese Homology Domain UP17_15085 SM00491 UP17_15085 UP17_15090 SM00357 Cold shock protein domain UP17_15095 SM00981 UP17_15095 UP17_15115 SM00487 DEAD-like helicases superfamily UP17_15115 SM00490 helicase superfamily c-terminal domain UP17_15165 SM00478 endonuclease III UP17_15165 SM00525 UP17_15165 UP17_15230 SM01130 UP17_15230 UP17_15235 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_15235 SM00895 UP17_15235 UP17_15250 SM00479 UP17_15250 UP17_15250 SM00487 DEAD-like helicases superfamily UP17_15250 SM00491 UP17_15250 UP17_15290 SM00851 MGS-like domain UP17_15350 SM00914 UP17_15350 UP17_15355 SM00028 Tetratricopeptide repeats UP17_15390 SM00138 Methyltransferase, chemotaxis proteins UP17_15395 SM00562 UP17_15395 UP17_15425 SM00411 bacterial (prokaryotic) histone like domain UP17_15455 SM00091 PAS domain UP17_15455 SM00382 ATPases associated with a variety of cellular activities UP17_15495 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_15500 SM00563 Phosphate acyltransferases UP17_15530 SM00870 UP17_15530 UP17_15540 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_15550 SM00422 helix_turn_helix, mercury resistance UP17_15575 SM00487 DEAD-like helicases superfamily UP17_15575 SM00490 helicase superfamily c-terminal domain UP17_15615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_15615 SM00387 Histidine kinase-like ATPases UP17_15615 SM00388 His Kinase A (phosphoacceptor) domain UP17_15620 SM00448 cheY-homologous receiver domain UP17_15620 SM00862 Transcriptional regulatory protein, C terminal UP17_15640 SM00363 S4 RNA-binding domain UP17_15745 SM00387 Histidine kinase-like ATPases UP17_15755 SM00936 Penicillin-binding protein 5, C-terminal domain UP17_15760 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain UP17_15820 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_15865 SM00849 Metallo-beta-lactamase superfamily UP17_15885 SM00382 ATPases associated with a variety of cellular activities UP17_15905 SM00849 Metallo-beta-lactamase superfamily UP17_15920 SM01350 UP17_15920 UP17_15955 SM00382 ATPases associated with a variety of cellular activities UP17_15965 SM00062 Bacterial periplasmic substrate-binding proteins UP17_15965 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. UP17_16000 SM00861 Transketolase, pyrimidine binding domain UP17_16015 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_16045 SM00448 cheY-homologous receiver domain UP17_16050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_16065 SM00363 S4 RNA-binding domain UP17_16070 SM00861 Transketolase, pyrimidine binding domain UP17_16105 SM00878 Biotin carboxylase C-terminal domain UP17_16150 SM00382 ATPases associated with a variety of cellular activities UP17_16155 SM00841 Elongation factor P, C-terminal UP17_16155 SM01185 UP17_16155 UP17_16210 SM00450 Rhodanese Homology Domain UP17_16230 SM00487 DEAD-like helicases superfamily UP17_16230 SM00490 helicase superfamily c-terminal domain UP17_16395 SM00857 Resolvase, N terminal domain UP17_16410 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_16425 SM00849 Metallo-beta-lactamase superfamily UP17_16445 SM00631 UP17_16445 UP17_16470 SM00028 Tetratricopeptide repeats UP17_16510 SM00382 ATPases associated with a variety of cellular activities UP17_16585 SM00382 ATPases associated with a variety of cellular activities UP17_16595 SM00518 AP endonuclease family 2 UP17_16600 SM00487 DEAD-like helicases superfamily UP17_16600 SM00490 helicase superfamily c-terminal domain UP17_16640 SM00400 zinc finger UP17_16640 SM00493 UP17_16640 UP17_16655 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_16695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_16745 SM01133 UP17_16745 UP17_16750 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_16765 SM00271 DnaJ molecular chaperone homology domain UP17_16785 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_16790 SM00838 Elongation factor G C-terminus UP17_16825 SM00849 Metallo-beta-lactamase superfamily UP17_16835 SM00278 Helix-hairpin-helix DNA-binding motif class 1 UP17_16855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_16865 SM01103 UP17_16865 UP17_17005 SM00732 Likely ribonuclease with RNase H fold. UP17_17015 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain UP17_17045 SM00382 ATPases associated with a variety of cellular activities UP17_17050 SM00028 Tetratricopeptide repeats UP17_17075 SM00382 ATPases associated with a variety of cellular activities UP17_17090 SM00382 ATPases associated with a variety of cellular activities UP17_17095 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_17125 SM00382 ATPases associated with a variety of cellular activities UP17_17260 SM00530 Helix-turn-helix XRE-family like proteins UP17_17295 SM00382 ATPases associated with a variety of cellular activities UP17_17300 SM00382 ATPases associated with a variety of cellular activities UP17_17360 SM00287 Bacterial SH3 domain homologues UP17_17360 SM00646 UP17_17360 UP17_17370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_17370 SM00954 Region found in RelA / SpoT proteins UP17_17420 SM01323 UP17_17420 UP17_17440 SM00382 ATPases associated with a variety of cellular activities UP17_17445 SM00278 Helix-hairpin-helix DNA-binding motif class 1 UP17_17510 SM01317 UP17_17510 UP17_17530 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_17550 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_17650 SM01004 Delta-aminolevulinic acid dehydratase UP17_17685 SM00382 ATPases associated with a variety of cellular activities UP17_17685 SM00464 Found in ATP-dependent protease La (LON) UP17_17690 SM00382 ATPases associated with a variety of cellular activities UP17_17695 SM00382 ATPases associated with a variety of cellular activities UP17_17695 SM00994 ClpX C4-type zinc finger UP17_17695 SM01086 C-terminal, D2-small domain, of ClpB protein UP17_17720 SM01329 UP17_17720 UP17_17725 SM00917 LeuA allosteric (dimerisation) domain UP17_17830 SM00909 Sporulation and spore germination UP17_17840 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_17845 SM00421 helix_turn_helix, Lux Regulon UP17_17880 SM00465 GIY-YIG type nucleases (URI domain) UP17_17890 SM00893 Electron transfer flavoprotein domain UP17_17895 SM00893 Electron transfer flavoprotein domain UP17_17925 SM00463 Small MutS-related domain UP17_17925 SM00533 DNA-binding domain of DNA mismatch repair MUTS family UP17_17925 SM00534 ATPase domain of DNA mismatch repair MUTS family UP17_17930 SM00278 Helix-hairpin-helix DNA-binding motif class 1 UP17_17930 SM00481 DNA polymerase alpha chain like domain UP17_17930 SM00483 DNA polymerase X family UP17_17950 SM00873 B3/4 domain UP17_17950 SM00874 tRNA synthetase B5 domain UP17_17950 SM00896 Ferredoxin-fold anticodon binding domain UP17_17960 SM00967 RNA 2'-O ribose methyltransferase substrate binding UP17_18005 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_18005 SM00895 UP17_18005 UP17_18070 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain UP17_18080 SM00382 ATPases associated with a variety of cellular activities UP17_18105 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP17_18120 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain UP17_18120 SM01232 UP17_18120 UP17_18125 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs UP17_18125 SM00474 3'-5' exonuclease UP17_18125 SM00475 5'-3' exonuclease UP17_18125 SM00482 DNA polymerase A domain UP17_18130 SM00244 prohibitin homologues UP17_18140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_18140 SM00387 Histidine kinase-like ATPases UP17_18140 SM00388 His Kinase A (phosphoacceptor) domain UP17_18145 SM00448 cheY-homologous receiver domain UP17_18145 SM00862 Transcriptional regulatory protein, C terminal UP17_18155 SM01329 UP17_18155 UP17_18210 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_18215 SM00919 Malic enzyme, NAD binding domain UP17_18215 SM01274 UP17_18215 UP17_18220 SM00481 DNA polymerase alpha chain like domain UP17_18245 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_18255 SM00849 Metallo-beta-lactamase superfamily UP17_18290 SM00852 Probable molybdopterin binding domain UP17_18345 SM00382 ATPases associated with a variety of cellular activities UP17_18395 SM00981 UP17_18395 UP17_18420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. UP17_18425 SM00363 S4 RNA-binding domain UP17_18425 SM01390 UP17_18425 UP17_18430 SM00363 S4 RNA-binding domain UP17_18450 SM00116 Domain in cystathionine beta-synthase and other proteins. UP17_18460 SM00354 helix_turn _helix lactose operon repressor UP17_18465 SM00830 Chorismate mutase type II UP17_18525 SM00342 helix_turn_helix, arabinose operon control protein UP17_18525 SM00871 Bacterial transcription activator, effector binding domain UP17_18545 SM00849 Metallo-beta-lactamase superfamily UP17_18720 SM01240 UP17_18720 UP17_18735 SM00448 cheY-homologous receiver domain UP17_18735 SM00862 Transcriptional regulatory protein, C terminal UP17_18740 SM00387 Histidine kinase-like ATPases UP17_18745 SM00382 ATPases associated with a variety of cellular activities UP17_18765 SM00420 helix_turn_helix, Deoxyribose operon repressor UP17_18770 SM00363 S4 RNA-binding domain UP17_18805 SM01329 UP17_18805 UP17_18815 SM00450 Rhodanese Homology Domain UP17_18825 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_18925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). UP17_18925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_18960 SM00257 Lysin motif UP17_19000 SM00966 SpoVT / AbrB like domain UP17_19030 SM00530 Helix-turn-helix XRE-family like proteins UP17_19040 SM00487 DEAD-like helicases superfamily UP17_19040 SM00490 helicase superfamily c-terminal domain UP17_19070 SM00014 Acid phosphatase homologues UP17_19105 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_19120 SM00091 PAS domain UP17_19120 SM00382 ATPases associated with a variety of cellular activities UP17_19175 SM00342 helix_turn_helix, arabinose operon control protein UP17_19180 SM00448 cheY-homologous receiver domain UP17_19185 SM00387 Histidine kinase-like ATPases UP17_19195 SM00478 endonuclease III UP17_19200 SM00342 helix_turn_helix, arabinose operon control protein UP17_19245 SM00422 helix_turn_helix, mercury resistance UP17_19320 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. UP17_19345 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_19355 SM00530 Helix-turn-helix XRE-family like proteins UP17_19370 SM00421 helix_turn_helix, Lux Regulon UP17_19370 SM00448 cheY-homologous receiver domain UP17_19375 SM00387 Histidine kinase-like ATPases UP17_19430 SM00849 Metallo-beta-lactamase superfamily UP17_19435 SM00155 Phospholipase D. Active site motifs. UP17_19480 SM01022 UP17_19480 UP17_19515 SM00858 UP17_19515 UP17_19525 SM01130 UP17_19525 UP17_19535 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain UP17_19540 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_19540 SM00895 UP17_19540 UP17_19580 SM00849 Metallo-beta-lactamase superfamily UP17_19610 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain UP17_19645 SM00882 Coenzyme A transferase UP17_19650 SM00882 Coenzyme A transferase UP17_19680 SM00382 ATPases associated with a variety of cellular activities UP17_19695 SM00354 helix_turn _helix lactose operon repressor UP17_19715 SM00882 Coenzyme A transferase UP17_19720 SM00882 Coenzyme A transferase UP17_19730 SM00382 ATPases associated with a variety of cellular activities UP17_19755 SM00530 Helix-turn-helix XRE-family like proteins UP17_19760 SM00825 Beta-ketoacyl synthase UP17_19765 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_19825 SM00287 Bacterial SH3 domain homologues UP17_19825 SM00326 Src homology 3 domains UP17_19890 SM00530 Helix-turn-helix XRE-family like proteins UP17_19905 SM00829 Enoylreductase UP17_19975 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_19980 SM00530 Helix-turn-helix XRE-family like proteins UP17_20055 SM00860 SMI1 / KNR4 family UP17_20065 SM00860 SMI1 / KNR4 family UP17_20070 SM00248 ankyrin repeats UP17_20075 SM00860 SMI1 / KNR4 family UP17_20110 SM00387 Histidine kinase-like ATPases UP17_20110 SM00388 His Kinase A (phosphoacceptor) domain UP17_20120 SM00382 ATPases associated with a variety of cellular activities UP17_20135 SM00448 cheY-homologous receiver domain UP17_20140 SM00387 Histidine kinase-like ATPases UP17_20175 SM00894 Excalibur calcium-binding domain UP17_20185 SM00448 cheY-homologous receiver domain UP17_20185 SM00850 LytTr DNA-binding domain UP17_20190 SM00387 Histidine kinase-like ATPases UP17_20300 SM00947 Carbonic anhydrase UP17_20310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_20310 SM00387 Histidine kinase-like ATPases UP17_20310 SM00388 His Kinase A (phosphoacceptor) domain UP17_20315 SM00448 cheY-homologous receiver domain UP17_20315 SM00862 Transcriptional regulatory protein, C terminal UP17_20360 SM00014 Acid phosphatase homologues UP17_20395 SM00382 ATPases associated with a variety of cellular activities UP17_20395 SM00930 UP17_20395 UP17_20425 SM00829 Enoylreductase UP17_20495 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_20525 SM00533 DNA-binding domain of DNA mismatch repair MUTS family UP17_20525 SM00534 ATPase domain of DNA mismatch repair MUTS family UP17_20530 SM00382 ATPases associated with a variety of cellular activities UP17_20570 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_20645 SM00382 ATPases associated with a variety of cellular activities UP17_20650 SM00382 ATPases associated with a variety of cellular activities UP17_20660 SM00342 helix_turn_helix, arabinose operon control protein UP17_20660 SM00448 cheY-homologous receiver domain UP17_20675 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_20690 SM00240 Forkhead associated domain UP17_20690 SM00862 Transcriptional regulatory protein, C terminal UP17_20705 SM00829 Enoylreductase UP17_20745 SM00344 helix_turn_helix ASNC type UP17_20785 SM00836 DALR anticodon binding domain UP17_20785 SM01016 Arginyl tRNA synthetase N terminal dom UP17_20790 SM00448 cheY-homologous receiver domain UP17_20800 SM00257 Lysin motif UP17_20800 SM00636 UP17_20800 UP17_20830 SM00382 ATPases associated with a variety of cellular activities UP17_20910 SM00530 Helix-turn-helix XRE-family like proteins UP17_20950 SM00344 helix_turn_helix ASNC type UP17_20995 SM00344 helix_turn_helix ASNC type UP17_21065 SM00849 Metallo-beta-lactamase superfamily UP17_21105 SM00914 UP17_21105 UP17_21190 SM00855 Phosphoglycerate mutase family UP17_21205 SM00849 Metallo-beta-lactamase superfamily UP17_21250 SM00530 Helix-turn-helix XRE-family like proteins UP17_21300 SM00014 Acid phosphatase homologues UP17_21375 SM00530 Helix-turn-helix XRE-family like proteins UP17_21460 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_21490 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_21490 SM00866 UP17_21490 UP17_21505 SM00382 ATPases associated with a variety of cellular activities UP17_21610 SM00047 Lysozyme subfamily 2 UP17_21610 SM00287 Bacterial SH3 domain homologues UP17_21630 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_21660 SM01207 UP17_21660 UP17_21695 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_21715 SM00382 ATPases associated with a variety of cellular activities UP17_21720 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_21725 SM00382 ATPases associated with a variety of cellular activities UP17_21745 SM00387 Histidine kinase-like ATPases UP17_21745 SM00421 helix_turn_helix, Lux Regulon UP17_21745 SM00448 cheY-homologous receiver domain UP17_21775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_21775 SM00387 Histidine kinase-like ATPases UP17_21775 SM00388 His Kinase A (phosphoacceptor) domain UP17_21780 SM00448 cheY-homologous receiver domain UP17_21780 SM00862 Transcriptional regulatory protein, C terminal UP17_21805 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_21805 SM00876 Biotin and Thiamin Synthesis associated domain UP17_21895 SM00448 cheY-homologous receiver domain UP17_21895 SM01012 UP17_21895 UP17_21900 SM00387 Histidine kinase-like ATPases UP17_21915 SM00327 von Willebrand factor (vWF) type A domain UP17_21920 SM00382 ATPases associated with a variety of cellular activities UP17_21930 SM01266 UP17_21930 UP17_22010 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_22045 SM00984 UDP binding domain UP17_22110 SM00382 ATPases associated with a variety of cellular activities UP17_22145 SM01234 UP17_22145 UP17_22160 SM00091 PAS domain UP17_22160 SM00387 Histidine kinase-like ATPases UP17_22165 SM00448 cheY-homologous receiver domain UP17_22170 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain UP17_22420 SM00849 Metallo-beta-lactamase superfamily UP17_22460 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_22485 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain UP17_22530 SM00829 Enoylreductase UP17_22580 SM00833 Cobalamin synthesis protein cobW C-terminal domain UP17_22585 SM00465 GIY-YIG type nucleases (URI domain) UP17_22595 SM00098 Alkaline phosphatase homologues UP17_22615 SM00257 Lysin motif UP17_22615 SM00631 UP17_22615 UP17_22620 SM01060 UP17_22620 UP17_22635 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor UP17_22760 SM00257 Lysin motif UP17_22760 SM00636 UP17_22760 UP17_22790 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_22800 SM00530 Helix-turn-helix XRE-family like proteins UP17_22810 SM00344 helix_turn_helix ASNC type UP17_22860 SM01298 UP17_22860 UP17_22865 SM00479 UP17_22865 UP17_23085 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_23100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_23145 SM00382 ATPases associated with a variety of cellular activities UP17_23160 SM00382 ATPases associated with a variety of cellular activities UP17_23160 SM00930 UP17_23160 UP17_23175 SM00493 UP17_23175 UP17_23225 SM00354 helix_turn _helix lactose operon repressor UP17_23235 SM00642 Alpha-amylase domain UP17_23285 SM00382 ATPases associated with a variety of cellular activities UP17_23305 SM00631 UP17_23305 UP17_23325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_23325 SM00387 Histidine kinase-like ATPases UP17_23325 SM00388 His Kinase A (phosphoacceptor) domain UP17_23330 SM00448 cheY-homologous receiver domain UP17_23330 SM00862 Transcriptional regulatory protein, C terminal UP17_23340 SM00421 helix_turn_helix, Lux Regulon UP17_23340 SM00448 cheY-homologous receiver domain UP17_23355 SM00448 cheY-homologous receiver domain UP17_23360 SM00091 PAS domain UP17_23360 SM00387 Histidine kinase-like ATPases UP17_23400 SM00926 Molybdopterin oxidoreductase Fe4S4 domain UP17_23400 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region UP17_23430 SM00316 Ribosomal protein S1-like RNA-binding domain UP17_23430 SM00357 Cold shock protein domain UP17_23430 SM00955 UP17_23430 UP17_23455 SM01192 UP17_23455 UP17_23455 SM01193 UP17_23455 UP17_23475 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain UP17_23535 SM00028 Tetratricopeptide repeats UP17_23620 SM00382 ATPases associated with a variety of cellular activities UP17_23625 SM00487 DEAD-like helicases superfamily UP17_23625 SM00490 helicase superfamily c-terminal domain UP17_23635 SM01060 UP17_23635 UP17_23645 SM00867 YceI-like domain UP17_23665 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_23670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_23670 SM00245 tail specific protease UP17_23685 SM00382 ATPases associated with a variety of cellular activities UP17_23700 SM00937 UP17_23700 UP17_23705 SM00957 SecA DEAD-like domain UP17_23705 SM00958 SecA preprotein cross-linking domain UP17_23710 SM00530 Helix-turn-helix XRE-family like proteins UP17_23790 SM00487 DEAD-like helicases superfamily UP17_23790 SM00490 helicase superfamily c-terminal domain UP17_23800 SM00421 helix_turn_helix, Lux Regulon UP17_23800 SM00448 cheY-homologous receiver domain UP17_23805 SM00387 Histidine kinase-like ATPases UP17_23850 SM00382 ATPases associated with a variety of cellular activities UP17_23885 SM00257 Lysin motif UP17_23910 SM00957 SecA DEAD-like domain UP17_23910 SM00958 SecA preprotein cross-linking domain UP17_23945 SM00028 Tetratricopeptide repeats UP17_23945 SM00530 Helix-turn-helix XRE-family like proteins UP17_23955 SM00487 DEAD-like helicases superfamily UP17_23955 SM00490 helicase superfamily c-terminal domain UP17_23965 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_23995 SM00382 ATPases associated with a variety of cellular activities UP17_24000 SM00382 ATPases associated with a variety of cellular activities UP17_24145 SM00382 ATPases associated with a variety of cellular activities UP17_24220 SM00226 Low molecular weight phosphatase family UP17_24245 SM00937 UP17_24245 UP17_24265 SM00357 Cold shock protein domain UP17_24265 SM00382 ATPases associated with a variety of cellular activities UP17_24265 SM00959 Rho termination factor, N-terminal domain UP17_24290 SM00448 cheY-homologous receiver domain UP17_24345 SM00155 Phospholipase D. Active site motifs. UP17_24355 SM00836 DALR anticodon binding domain UP17_24355 SM01016 Arginyl tRNA synthetase N terminal dom UP17_24400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. UP17_24445 SM00986 Uracil DNA glycosylase superfamily UP17_24445 SM00987 UreE urease accessory protein, C-terminal domain UP17_24500 SM00347 helix_turn_helix multiple antibiotic resistance protein UP17_24555 SM00855 Phosphoglycerate mutase family UP17_24580 SM00382 ATPases associated with a variety of cellular activities UP17_24605 SM00060 Fibronectin type 3 domain UP17_24620 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain UP17_24620 SM00437 Bacterial DNA topoisomerase I DNA-binding domain UP17_24620 SM00493 UP17_24620 UP17_24625 SM00382 ATPases associated with a variety of cellular activities UP17_24640 SM00487 DEAD-like helicases superfamily UP17_24640 SM00490 helicase superfamily c-terminal domain UP17_24690 SM00062 Bacterial periplasmic substrate-binding proteins UP17_24690 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. UP17_24700 SM00382 ATPases associated with a variety of cellular activities UP17_24720 SM00387 Histidine kinase-like ATPases UP17_24720 SM00388 His Kinase A (phosphoacceptor) domain UP17_24725 SM00448 cheY-homologous receiver domain UP17_24725 SM00862 Transcriptional regulatory protein, C terminal UP17_24775 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase UP17_24790 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase UP17_24820 SM01006 Siderophore biosynthesis protein domain UP17_24840 SM00642 Alpha-amylase domain UP17_24850 SM01060 UP17_24850 UP17_24855 SM00487 DEAD-like helicases superfamily UP17_24855 SM00490 helicase superfamily c-terminal domain UP17_24865 SM00729 Elongator protein 3, MiaB family, Radical SAM UP17_24875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. UP17_24880 SM00849 Metallo-beta-lactamase superfamily UP17_24895 SM00091 PAS domain UP17_24895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain UP17_24895 SM00387 Histidine kinase-like ATPases UP17_24895 SM00388 His Kinase A (phosphoacceptor) domain UP17_24900 SM00448 cheY-homologous receiver domain UP17_24900 SM00862 Transcriptional regulatory protein, C terminal UP17_24905 SM01208 UP17_24905 UP17_24930 SM00788 Adenylosuccinate synthetase UP17_24945 SM00267 diguanylate cyclase UP17_25000 SM00470 ParB-like nuclease domain UP17_25010 SM00470 ParB-like nuclease domain UP17_25020 SM01228 UP17_25020 UP17_25035 SM00393 Putative single-stranded nucleic acids-binding domain UP17_25035 SM01245 UP17_25035 UP17_25075 SM00267 diguanylate cyclase UP17_25120 SM00530 Helix-turn-helix XRE-family like proteins UP17_25220 SM00345 helix_turn_helix gluconate operon transcriptional repressor UP17_25235 SM00422 helix_turn_helix, mercury resistance UP17_25235 SM00871 Bacterial transcription activator, effector binding domain UP17_25260 SM00342 helix_turn_helix, arabinose operon control protein UP17_25260 SM00871 Bacterial transcription activator, effector binding domain UP17_25290 SM00894 Excalibur calcium-binding domain UP17_25325 SM00382 ATPases associated with a variety of cellular activities UP17_25340 SM00530 Helix-turn-helix XRE-family like proteins UP17_25440 SM00966 SpoVT / AbrB like domain UP17_25490 SM01266 UP17_25490 UP17_25500 SM00382 ATPases associated with a variety of cellular activities UP17_25530 SM00247 Beta/gamma crystallins UP17_25540 SM00382 ATPases associated with a variety of cellular activities UP17_25545 SM00382 ATPases associated with a variety of cellular activities UP17_25635 SM00091 PAS domain UP17_25785 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain UP17_25795 SM01092 CO dehydrogenase flavoprotein C-terminal domain UP17_25810 SM00914 UP17_25810 UP17_25850 SM00448 cheY-homologous receiver domain UP17_25850 SM00850 LytTr DNA-binding domain