UP17_06260 1c628b8ec6a12ee60be8ab1539a510a3 400 Pfam PF00246 Zinc carboxypeptidase 55 251 1.6E-19 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_06260 1c628b8ec6a12ee60be8ab1539a510a3 400 SUPERFAMILY SSF53187 43 368 2.88E-37 T 11-10-2018 UP17_06260 1c628b8ec6a12ee60be8ab1539a510a3 400 Gene3D G3DSA:3.40.630.10 39 377 1.0E-35 T 11-10-2018 UP17_06260 1c628b8ec6a12ee60be8ab1539a510a3 400 SMART SM00631 45 366 5.4E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Gene3D G3DSA:1.10.460.10 135 550 6.4E-166 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 55.41 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Pfam PF01751 Toprim domain 5 113 8.8E-30 T 11-10-2018 IPR006171 TOPRIM domain UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Gene3D G3DSA:3.30.65.10 559 617 4.3E-14 T 11-10-2018 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 SMART SM00436 104 192 7.5E-53 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Gene3D G3DSA:3.40.50.140 1 134 1.2E-53 T 11-10-2018 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 SUPERFAMILY SSF57783 576 613 4.59E-13 T 11-10-2018 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 SMART SM00493 3 103 3.8E-32 T 11-10-2018 IPR006171 TOPRIM domain UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 SUPERFAMILY SSF56712 4 625 3.53E-196 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Pfam PF01131 DNA topoisomerase 128 548 2.1E-135 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 1.3E-258 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 687 0.015 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 1.7E-11 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 576 613 1.3E-14 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Gene3D G3DSA:1.10.290.10 250 385 6.4E-166 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 SMART SM00437 242 510 2.6E-121 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 UP17_07725 73bf62906c5f2042368ea33b275b4a7f 691 Gene3D G3DSA:2.70.20.10 184 457 6.4E-166 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 Pfam PF01926 50S ribosome-binding GTPase 18 132 1.6E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 Pfam PF07650 KH domain 215 293 1.0E-21 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 SUPERFAMILY SSF52540 18 213 3.84E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 175 5.0E-29 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 SUPERFAMILY SSF54814 189 305 9.48E-43 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 Gene3D G3DSA:3.30.300.20 193 306 4.6E-44 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 TIGRFAM TIGR00436 era: GTP-binding protein Era 16 287 2.7E-113 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 Hamap MF_00367 GTPase Era [era]. 13 304 39.176 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 Gene3D G3DSA:3.40.50.300 11 192 3.5E-50 T 11-10-2018 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 18 38 5.1E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_16675 a3503fb086c6f5b9061d02ee46e6d1ec 309 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 94 109 5.1E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_25155 7e4fb12d624928a427b8b21740bbebe9 414 Gene3D G3DSA:3.40.710.10 2 414 2.7E-106 T 11-10-2018 UP17_25155 7e4fb12d624928a427b8b21740bbebe9 414 SUPERFAMILY SSF56601 18 409 1.3E-80 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_25155 7e4fb12d624928a427b8b21740bbebe9 414 Pfam PF00144 Beta-lactamase 22 393 3.5E-61 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 PRINTS PR00045 Sigma-54 factor signature 340 352 2.1E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 PRINTS PR00045 Sigma-54 factor signature 356 367 2.1E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 PRINTS PR00045 Sigma-54 factor signature 154 171 2.1E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 PRINTS PR00045 Sigma-54 factor signature 416 434 2.1E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 440 2.6E-127 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 Gene3D G3DSA:1.10.10.60 383 440 7.4E-22 T 11-10-2018 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 50 1.9E-13 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 Gene3D G3DSA:1.10.10.1330 89 201 3.3E-19 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 Pfam PF04963 Sigma-54 factor, core binding domain 82 267 2.5E-48 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 421 428 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 Pfam PF04552 Sigma-54, DNA binding domain 280 441 7.7E-59 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 PIRSF PIRSF000774 1 443 6.1E-128 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_23490 dba1bc7c74ffef6cc94a9c4bf1c80992 443 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 328 347 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 UP17_03605 964f57f7134c7e51cb8c98291c833c43 156 Gene3D G3DSA:1.20.120.450 2 148 1.7E-22 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_03605 964f57f7134c7e51cb8c98291c833c43 156 Pfam PF12867 DinB superfamily 11 140 6.2E-10 T 11-10-2018 IPR024775 DinB-like domain UP17_03605 964f57f7134c7e51cb8c98291c833c43 156 SUPERFAMILY SSF109854 1 154 3.48E-27 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 PIRSF PIRSF000103 1 298 1.9E-66 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 Gene3D G3DSA:3.40.50.720 2 166 1.4E-48 T 11-10-2018 UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 9 22 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 SUPERFAMILY SSF48179 169 290 1.28E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 Gene3D G3DSA:1.10.1040.10 168 295 1.4E-38 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 164 2.2E-40 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 SUPERFAMILY SSF51735 5 165 1.64E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_12555 71aafb6ecddc83eacf3734c7c0424e73 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 286 1.4E-30 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 UP17_08040 c0db3cd09ddc7aaf6762f3d1c99afb46 408 Gene3D G3DSA:3.30.830.10 208 405 1.8E-55 T 11-10-2018 UP17_08040 c0db3cd09ddc7aaf6762f3d1c99afb46 408 SUPERFAMILY SSF63411 225 401 4.62E-45 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UP17_08040 c0db3cd09ddc7aaf6762f3d1c99afb46 408 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 2.1E-48 T 11-10-2018 IPR011765 Peptidase M16, N-terminal UP17_08040 c0db3cd09ddc7aaf6762f3d1c99afb46 408 Gene3D G3DSA:3.30.830.10 1 207 1.4E-79 T 11-10-2018 UP17_08040 c0db3cd09ddc7aaf6762f3d1c99afb46 408 Pfam PF05193 Peptidase M16 inactive domain 166 338 1.3E-40 T 11-10-2018 IPR007863 Peptidase M16, C-terminal UP17_08040 c0db3cd09ddc7aaf6762f3d1c99afb46 408 SUPERFAMILY SSF63411 3 204 1.83E-61 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UP17_08040 c0db3cd09ddc7aaf6762f3d1c99afb46 408 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 UP17_09015 96d682b5776b50b258f35b8d6adbcaf2 177 Gene3D G3DSA:3.40.50.850 5 171 1.3E-40 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_09015 96d682b5776b50b258f35b8d6adbcaf2 177 SUPERFAMILY SSF52499 3 165 1.31E-39 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_09015 96d682b5776b50b258f35b8d6adbcaf2 177 Pfam PF00857 Isochorismatase family 8 146 1.2E-31 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 UP17_12945 d1aef7ef36bbbe1571befcdde65e3679 71 Pfam PF13046 Protein of unknown function (DUF3906) 1 64 1.4E-31 T 11-10-2018 IPR024998 Protein of unknown function DUF3906 UP17_24990 102f93b4679651d70b0276f14016e77c 211 SUPERFAMILY SSF53163 16 201 3.14E-55 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily UP17_24990 102f93b4679651d70b0276f14016e77c 211 Pfam PF06866 Protein of unknown function (DUF1256) 19 183 8.7E-65 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 UP17_24990 102f93b4679651d70b0276f14016e77c 211 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 44 185 2.5E-65 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 25 253 1.9E-114 T 11-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 SUPERFAMILY SSF88659 112 187 7.85E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 Pfam PF04545 Sigma-70, region 4 202 250 2.7E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 Pfam PF04542 Sigma-70 region 2 41 107 2.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 34 253 4.4E-88 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 Pfam PF04539 Sigma-70 region 3 119 184 1.2E-13 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 PRINTS PR00046 Major sigma-70 factor signature 206 218 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 PRINTS PR00046 Major sigma-70 factor signature 238 249 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 PRINTS PR00046 Major sigma-70 factor signature 223 238 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 PRINTS PR00046 Major sigma-70 factor signature 88 96 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 PRINTS PR00046 Major sigma-70 factor signature 64 77 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 SUPERFAMILY SSF88946 14 108 7.69E-34 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 PIRSF PIRSF000770 105 255 2.3E-20 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 PIRSF PIRSF000770 6 105 2.8E-17 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 SUPERFAMILY SSF88659 174 254 3.36E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 252 1.6E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 Gene3D G3DSA:1.10.10.10 183 255 3.4E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 Gene3D G3DSA:1.10.10.10 109 162 9.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15740 cc30a5dbf9a03a596dc77bfa70fe51b8 255 Gene3D G3DSA:1.20.120.1810 2 108 1.9E-27 T 11-10-2018 UP17_09505 e317dfcb41626fefd53c66bb303bde5b 163 Gene3D G3DSA:3.40.630.30 3 147 3.0E-9 T 11-10-2018 UP17_09505 e317dfcb41626fefd53c66bb303bde5b 163 Pfam PF00583 Acetyltransferase (GNAT) family 41 133 5.6E-8 T 11-10-2018 IPR000182 GNAT domain UP17_09505 e317dfcb41626fefd53c66bb303bde5b 163 SUPERFAMILY SSF55729 45 134 1.83E-7 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_07120 96fb3173a6935683770870ba0be39c4c 360 SUPERFAMILY SSF49503 131 284 1.12E-37 T 11-10-2018 IPR008972 Cupredoxin UP17_07120 96fb3173a6935683770870ba0be39c4c 360 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 51 109 1.5E-10 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 SUPERFAMILY SSF46626 256 355 7.23E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 34 248 2.5E-49 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 Gene3D G3DSA:2.60.40.2600 130 360 1.7E-64 T 11-10-2018 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 178 232 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 Gene3D G3DSA:1.10.287.90 30 115 7.9E-27 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 PRINTS PR01166 Cytochrome c oxidase subunit II signature 98 118 6.8E-7 T 11-10-2018 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 PRINTS PR01166 Cytochrome c oxidase subunit II signature 86 98 6.8E-7 T 11-10-2018 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 PRINTS PR01166 Cytochrome c oxidase subunit II signature 221 238 6.8E-7 T 11-10-2018 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 158 236 4.9E-13 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 Pfam PF00034 Cytochrome c 264 356 3.5E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07120 96fb3173a6935683770870ba0be39c4c 360 SUPERFAMILY SSF81464 17 117 4.41E-23 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_22980 bdcf96eea285b95ce4434016d4a388e6 159 SUPERFAMILY SSF55811 6 118 1.9E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_22980 bdcf96eea285b95ce4434016d4a388e6 159 Gene3D G3DSA:3.90.79.10 1 140 1.6E-23 T 11-10-2018 UP17_22980 bdcf96eea285b95ce4434016d4a388e6 159 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 UP17_22980 bdcf96eea285b95ce4434016d4a388e6 159 PRINTS PR00502 NUDIX hydrolase family signature 36 50 4.8E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_22980 bdcf96eea285b95ce4434016d4a388e6 159 PRINTS PR00502 NUDIX hydrolase family signature 50 65 4.8E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_22980 bdcf96eea285b95ce4434016d4a388e6 159 Pfam PF00293 NUDIX domain 9 116 8.5E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 Gene3D G3DSA:3.30.470.130 1 449 4.0E-198 T 11-10-2018 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.2E-48 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 5.5E-44 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 9.8E-82 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 SUPERFAMILY SSF52440 1 113 4.75E-51 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 SMART SM00878 337 443 5.5E-70 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 449 7.6E-238 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 SUPERFAMILY SSF51246 332 443 1.67E-46 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 SUPERFAMILY SSF56059 83 349 1.61E-67 T 11-10-2018 UP17_16105 761ce1631c4ea5b7975cd48bc4ff2a87 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 195 207 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 212 225 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 SUPERFAMILY SSF55681 117 584 5.17E-110 T 11-10-2018 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 Pfam PF02938 GAD domain 313 406 7.0E-30 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 583 7.2E-261 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 Gene3D G3DSA:3.30.1360.30 277 420 3.6E-196 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 SUPERFAMILY SSF50249 4 108 9.14E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 Gene3D G3DSA:2.40.50.140 1 109 9.5E-33 T 11-10-2018 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 1.1E-16 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 Gene3D G3DSA:3.30.930.10 123 579 3.6E-196 T 11-10-2018 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 558 5.7E-110 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 585 34.965 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 UP17_17345 c4bdf814dc0f27bb2da19396562121ad 589 SUPERFAMILY SSF55261 294 420 1.49E-42 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 UP17_11795 69d531b0ac26e8795793b177197db944 226 SUPERFAMILY SSF48295 97 182 2.09E-18 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_11795 69d531b0ac26e8795793b177197db944 226 SUPERFAMILY SSF48295 38 108 1.31E-11 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_11795 69d531b0ac26e8795793b177197db944 226 SUPERFAMILY SSF48295 2 55 5.75E-8 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_11795 69d531b0ac26e8795793b177197db944 226 Pfam PF13518 Helix-turn-helix domain 10 55 4.9E-6 T 11-10-2018 UP17_11795 69d531b0ac26e8795793b177197db944 226 Pfam PF13518 Helix-turn-helix domain 131 181 2.9E-13 T 11-10-2018 UP17_12745 69d531b0ac26e8795793b177197db944 226 SUPERFAMILY SSF48295 97 182 2.09E-18 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_12745 69d531b0ac26e8795793b177197db944 226 SUPERFAMILY SSF48295 38 108 1.31E-11 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_12745 69d531b0ac26e8795793b177197db944 226 SUPERFAMILY SSF48295 2 55 5.75E-8 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_12745 69d531b0ac26e8795793b177197db944 226 Pfam PF13518 Helix-turn-helix domain 10 55 4.9E-6 T 11-10-2018 UP17_12745 69d531b0ac26e8795793b177197db944 226 Pfam PF13518 Helix-turn-helix domain 131 181 2.9E-13 T 11-10-2018 UP17_00410 fdcf4ab4b3da7419615da7a69764c10f 293 SUPERFAMILY SSF64397 2 241 1.18E-77 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 UP17_00410 fdcf4ab4b3da7419615da7a69764c10f 293 Gene3D G3DSA:3.55.30.10 2 233 9.2E-94 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 UP17_00410 fdcf4ab4b3da7419615da7a69764c10f 293 SUPERFAMILY SSF118352 232 289 8.24E-21 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 UP17_00410 fdcf4ab4b3da7419615da7a69764c10f 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 291 41.431 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 UP17_00410 fdcf4ab4b3da7419615da7a69764c10f 293 Pfam PF01430 Hsp33 protein 3 280 5.7E-91 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 UP17_00410 fdcf4ab4b3da7419615da7a69764c10f 293 Gene3D G3DSA:3.90.1280.10 234 291 6.5E-24 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 UP17_00410 fdcf4ab4b3da7419615da7a69764c10f 293 PIRSF PIRSF005261 1 292 2.5E-79 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 UP17_24740 9fb91d91aa0645c1134f4a96c0adf555 112 Pfam PF04341 Protein of unknown function, DUF485 24 107 1.4E-23 T 11-10-2018 IPR007436 Protein of unknown function DUF485 UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 Pfam PF07568 Histidine kinase 266 337 6.4E-18 T 11-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 Gene3D G3DSA:3.30.450.280 4 135 7.8E-9 T 11-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 Pfam PF13581 Histidine kinase-like ATPase domain 360 420 2.2E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 SMART SM00387 362 457 5.1E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 Gene3D G3DSA:3.30.565.10 323 457 6.0E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 Gene3D G3DSA:3.30.450.20 225 317 9.8E-8 T 11-10-2018 UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 Pfam PF12282 Signal transduction histidine kinase 8 137 3.7E-24 T 11-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal UP17_21900 1d59a720b40e9c3545c06cc941ff1cec 457 SUPERFAMILY SSF55874 341 455 1.17E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_24400 f2b5d1acab4b13c2dd48d3c9172462b0 435 SMART SM00471 57 187 3.9E-11 T 11-10-2018 IPR003607 HD/PDEase domain UP17_24400 f2b5d1acab4b13c2dd48d3c9172462b0 435 SUPERFAMILY SSF109604 7 415 5.65E-121 T 11-10-2018 UP17_24400 f2b5d1acab4b13c2dd48d3c9172462b0 435 Gene3D G3DSA:1.20.1250.30 235 413 7.2E-169 T 11-10-2018 UP17_24400 f2b5d1acab4b13c2dd48d3c9172462b0 435 Gene3D G3DSA:1.10.3210.10 11 402 7.2E-169 T 11-10-2018 UP17_24400 f2b5d1acab4b13c2dd48d3c9172462b0 435 Pfam PF01966 HD domain 61 181 1.5E-16 T 11-10-2018 IPR006674 HD domain UP17_13610 d2474de2e3d60ca1856b6f95855abf0d 189 SUPERFAMILY SSF47240 1 186 3.01E-68 T 11-10-2018 IPR009078 Ferritin-like superfamily UP17_13610 d2474de2e3d60ca1856b6f95855abf0d 189 Gene3D G3DSA:1.20.1260.10 1 184 8.3E-65 T 11-10-2018 IPR012347 Ferritin-like UP17_13610 d2474de2e3d60ca1856b6f95855abf0d 189 Pfam PF05067 Manganese containing catalase 1 183 2.1E-76 T 11-10-2018 IPR007760 Manganese catalase UP17_23645 dd2a8b173a5d739b3003e6e5910b5431 177 Pfam PF04264 YceI-like domain 6 173 4.3E-47 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like UP17_23645 dd2a8b173a5d739b3003e6e5910b5431 177 SMART SM00867 5 174 2.0E-76 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like UP17_23645 dd2a8b173a5d739b3003e6e5910b5431 177 Gene3D G3DSA:2.40.128.110 4 177 8.6E-58 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily UP17_23645 dd2a8b173a5d739b3003e6e5910b5431 177 SUPERFAMILY SSF101874 5 175 8.76E-60 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily UP17_23665 4850f0d5bc4ae5b733571b2581e6130e 387 SMART SM00228 285 353 3.4E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_23665 4850f0d5bc4ae5b733571b2581e6130e 387 Gene3D G3DSA:2.30.42.10 274 361 8.1E-11 T 11-10-2018 UP17_23665 4850f0d5bc4ae5b733571b2581e6130e 387 SUPERFAMILY SSF50156 285 357 3.02E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_19980 d63b65a1ac532ce2d7db53171a023758 72 SUPERFAMILY SSF47413 6 68 1.93E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_19980 d63b65a1ac532ce2d7db53171a023758 72 SMART SM00530 9 64 1.0E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19980 d63b65a1ac532ce2d7db53171a023758 72 Gene3D G3DSA:1.10.260.40 5 70 4.0E-20 T 11-10-2018 UP17_19980 d63b65a1ac532ce2d7db53171a023758 72 Pfam PF01381 Helix-turn-helix 11 64 8.0E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_02925 6339b805576def12cfe0142939347d60 271 Pfam PF13276 HTH-like domain 27 83 5.0E-14 T 11-10-2018 IPR025948 HTH-like domain UP17_02925 6339b805576def12cfe0142939347d60 271 SUPERFAMILY SSF53098 99 261 1.39E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_02925 6339b805576def12cfe0142939347d60 271 Gene3D G3DSA:3.30.420.10 104 259 1.7E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_02925 6339b805576def12cfe0142939347d60 271 Pfam PF00665 Integrase core domain 109 221 2.4E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_20975 6339b805576def12cfe0142939347d60 271 Pfam PF13276 HTH-like domain 27 83 5.0E-14 T 11-10-2018 IPR025948 HTH-like domain UP17_20975 6339b805576def12cfe0142939347d60 271 SUPERFAMILY SSF53098 99 261 1.39E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_20975 6339b805576def12cfe0142939347d60 271 Gene3D G3DSA:3.30.420.10 104 259 1.7E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_20975 6339b805576def12cfe0142939347d60 271 Pfam PF00665 Integrase core domain 109 221 2.4E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_03110 6339b805576def12cfe0142939347d60 271 Pfam PF13276 HTH-like domain 27 83 5.0E-14 T 11-10-2018 IPR025948 HTH-like domain UP17_03110 6339b805576def12cfe0142939347d60 271 SUPERFAMILY SSF53098 99 261 1.39E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_03110 6339b805576def12cfe0142939347d60 271 Gene3D G3DSA:3.30.420.10 104 259 1.7E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_03110 6339b805576def12cfe0142939347d60 271 Pfam PF00665 Integrase core domain 109 221 2.4E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_08625 6339b805576def12cfe0142939347d60 271 Pfam PF13276 HTH-like domain 27 83 5.0E-14 T 11-10-2018 IPR025948 HTH-like domain UP17_08625 6339b805576def12cfe0142939347d60 271 SUPERFAMILY SSF53098 99 261 1.39E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_08625 6339b805576def12cfe0142939347d60 271 Gene3D G3DSA:3.30.420.10 104 259 1.7E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_08625 6339b805576def12cfe0142939347d60 271 Pfam PF00665 Integrase core domain 109 221 2.4E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_13405 95785f7889bebf47829237c0838aed97 476 SUPERFAMILY SSF48557 8 463 3.46E-147 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 UP17_13405 95785f7889bebf47829237c0838aed97 476 Pfam PF00206 Lyase 16 345 1.0E-110 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal UP17_13405 95785f7889bebf47829237c0838aed97 476 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.3E-6 T 11-10-2018 UP17_13405 95785f7889bebf47829237c0838aed97 476 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.3E-6 T 11-10-2018 UP17_13405 95785f7889bebf47829237c0838aed97 476 Gene3D G3DSA:1.20.200.10 143 410 3.0E-113 T 11-10-2018 UP17_13405 95785f7889bebf47829237c0838aed97 476 Pfam PF10415 Fumarase C C-terminus 412 464 7.6E-17 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_13405 95785f7889bebf47829237c0838aed97 476 Gene3D G3DSA:1.10.40.30 411 462 4.0E-19 T 11-10-2018 UP17_13405 95785f7889bebf47829237c0838aed97 476 Gene3D G3DSA:1.10.275.10 9 142 6.3E-58 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal UP17_13405 95785f7889bebf47829237c0838aed97 476 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 7.0E-32 T 11-10-2018 IPR000362 Fumarate lyase family UP17_13405 95785f7889bebf47829237c0838aed97 476 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 7.0E-32 T 11-10-2018 IPR000362 Fumarate lyase family UP17_13405 95785f7889bebf47829237c0838aed97 476 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 7.0E-32 T 11-10-2018 IPR000362 Fumarate lyase family UP17_13405 95785f7889bebf47829237c0838aed97 476 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 7.0E-32 T 11-10-2018 IPR000362 Fumarate lyase family UP17_13405 95785f7889bebf47829237c0838aed97 476 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 UP17_13405 95785f7889bebf47829237c0838aed97 476 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 9 469 1.1E-238 T 11-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 SMART SM00091 213 279 1.2E-5 T 11-10-2018 IPR000014 PAS domain UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 SUPERFAMILY SSF52540 335 574 1.46E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 Gene3D G3DSA:3.40.50.300 322 508 2.5E-64 T 11-10-2018 UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 Gene3D G3DSA:3.30.450.20 215 312 4.5E-8 T 11-10-2018 UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 Gene3D G3DSA:1.10.8.60 509 580 8.6E-17 T 11-10-2018 UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 360 373 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 423 438 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 SUPERFAMILY SSF55785 202 270 6.81E-8 T 11-10-2018 IPR035965 PAS domain superfamily UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 Pfam PF00989 PAS fold 213 266 2.1E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 SMART SM00382 356 501 2.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_01795 6aea6bd123b5123d22128d58af1e3e6e 677 Pfam PF00158 Sigma-54 interaction domain 336 503 3.4E-64 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 SUPERFAMILY SSF88946 4 100 3.92E-23 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 251 3.7E-83 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 Pfam PF04545 Sigma-70, region 4 199 248 2.1E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 Pfam PF04542 Sigma-70 region 2 28 100 5.7E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 249 5.9E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 Gene3D G3DSA:1.10.1740.10 14 97 3.0E-25 T 11-10-2018 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 Gene3D G3DSA:1.20.140.160 99 252 3.3E-45 T 11-10-2018 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 PRINTS PR00046 Major sigma-70 factor signature 203 215 4.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 PRINTS PR00046 Major sigma-70 factor signature 235 246 4.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 PRINTS PR00046 Major sigma-70 factor signature 55 68 4.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 PRINTS PR00046 Major sigma-70 factor signature 220 235 4.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 PRINTS PR00046 Major sigma-70 factor signature 79 87 4.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 SUPERFAMILY SSF88659 101 168 8.78E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 PIRSF PIRSF000770 12 252 5.7E-41 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 Pfam PF04539 Sigma-70 region 3 108 185 8.3E-9 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 UP17_07910 eca80d8ed9a0e68e349c614419b5ae22 252 SUPERFAMILY SSF88659 166 252 9.53E-22 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_24065 3abe7077eb01d72c203b1e9e5d101021 339 Pfam PF08486 Stage II sporulation protein 62 166 7.2E-26 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal UP17_24065 3abe7077eb01d72c203b1e9e5d101021 339 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 66 326 1.3E-75 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 UP17_24065 3abe7077eb01d72c203b1e9e5d101021 339 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 2 327 1.2E-124 T 11-10-2018 IPR014225 Sporulation stage II, protein D firmicutes UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.7E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.7E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.7E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 1.1E-14 T 11-10-2018 UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 SUPERFAMILY SSF46785 1 62 2.03E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 SUPERFAMILY SSF54909 64 135 9.65E-5 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 Gene3D G3DSA:3.30.70.920 51 136 6.0E-10 T 11-10-2018 UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 SMART SM00344 2 109 7.7E-21 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_20950 f7fb68076d0c13362b1e42fc9689bc24 136 Gene3D G3DSA:1.10.10.10 1 49 1.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_17260 5df2de72179193270968af5c72672213 103 Pfam PF01381 Helix-turn-helix 6 54 3.0E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_17260 5df2de72179193270968af5c72672213 103 SUPERFAMILY SSF47406 70 100 4.71E-7 T 11-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 UP17_17260 5df2de72179193270968af5c72672213 103 Gene3D G3DSA:1.10.260.40 1 101 8.8E-23 T 11-10-2018 UP17_17260 5df2de72179193270968af5c72672213 103 SMART SM00530 5 61 8.9E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_17260 5df2de72179193270968af5c72672213 103 SUPERFAMILY SSF47413 2 65 2.56E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_09865 e614fbbdc9383af2418d8519fa6af43f 489 SMART SM00342 403 486 6.8E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_09865 e614fbbdc9383af2418d8519fa6af43f 489 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 440 482 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_09865 e614fbbdc9383af2418d8519fa6af43f 489 SUPERFAMILY SSF52172 3 117 2.13E-6 T 11-10-2018 IPR011006 CheY-like superfamily UP17_09865 e614fbbdc9383af2418d8519fa6af43f 489 SUPERFAMILY SSF46689 439 487 1.84E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_09865 e614fbbdc9383af2418d8519fa6af43f 489 Pfam PF12833 Helix-turn-helix domain 410 486 7.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_09865 e614fbbdc9383af2418d8519fa6af43f 489 Gene3D G3DSA:1.10.10.60 383 488 2.9E-27 T 11-10-2018 UP17_19785 9c78a4947efecd5ac2a60b17e18943fa 118 SUPERFAMILY SSF142906 2 113 1.07E-35 T 11-10-2018 IPR038056 YjbR-like superfamily UP17_19785 9c78a4947efecd5ac2a60b17e18943fa 118 Gene3D G3DSA:3.90.1150.30 1 118 1.5E-34 T 11-10-2018 IPR038056 YjbR-like superfamily UP17_19785 9c78a4947efecd5ac2a60b17e18943fa 118 Pfam PF04237 YjbR 14 106 6.5E-21 T 11-10-2018 IPR007351 Uncharacterised protein YjbR UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 233 2.9E-39 T 11-10-2018 UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 Gene3D G3DSA:3.40.50.720 1 236 1.1E-53 T 11-10-2018 UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 220 3.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 3.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 3.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.3E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08825 b16f5f7bb7aa16bfb2cb0a31fbc78fd7 237 SUPERFAMILY SSF51735 3 235 1.44E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_17695 841ff6371a719715c76bcce69379ac60 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 406 3.7E-214 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 UP17_17695 841ff6371a719715c76bcce69379ac60 422 SUPERFAMILY SSF57716 11 46 2.85E-11 T 11-10-2018 UP17_17695 841ff6371a719715c76bcce69379ac60 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 7.6E-18 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_17695 841ff6371a719715c76bcce69379ac60 422 SMART SM00994 10 49 5.4E-23 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 UP17_17695 841ff6371a719715c76bcce69379ac60 422 Gene3D G3DSA:3.40.50.300 54 309 1.5E-106 T 11-10-2018 UP17_17695 841ff6371a719715c76bcce69379ac60 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.591 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 UP17_17695 841ff6371a719715c76bcce69379ac60 422 SMART SM00382 108 269 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17695 841ff6371a719715c76bcce69379ac60 422 SUPERFAMILY SSF52540 60 392 8.99E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17695 841ff6371a719715c76bcce69379ac60 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 3.6E-51 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_17695 841ff6371a719715c76bcce69379ac60 422 SMART SM01086 311 405 4.7E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_17695 841ff6371a719715c76bcce69379ac60 422 Gene3D G3DSA:1.10.8.60 310 417 8.2E-37 T 11-10-2018 UP17_17695 841ff6371a719715c76bcce69379ac60 422 Pfam PF06689 ClpX C4-type zinc finger 12 48 5.2E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 UP17_17695 841ff6371a719715c76bcce69379ac60 422 Gene3D G3DSA:3.30.50.30 3 50 1.4E-21 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 374 400 0.0035 T 11-10-2018 IPR006530 YD repeat UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 198 218 3.3E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 272 290 3.3E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 SUPERFAMILY SSF52540 196 364 9.6E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 Pfam PF13167 GTP-binding GTPase N-terminal 21 109 6.0E-33 T 11-10-2018 IPR025121 GTPase HflX, N-terminal UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 PIRSF PIRSF006809 1 420 3.5E-149 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 Gene3D G3DSA:3.40.50.11060 14 135 2.2E-40 T 11-10-2018 UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 Pfam PF01926 50S ribosome-binding GTPase 198 323 1.5E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 Hamap MF_00900 GTPase HflX [hflX]. 24 389 46.771 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 Pfam PF16360 GTP-binding GTPase Middle Region 111 190 4.3E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 Gene3D G3DSA:3.40.50.300 195 361 3.1E-36 T 11-10-2018 UP17_01060 b3f8d499d8dc8f76cfd72d78c64cc67b 420 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 6 358 1.0E-137 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 UP17_10475 3fabfe1046b1ea607dc73e349c514d7e 250 Gene3D G3DSA:1.10.510.10 7 231 1.1E-37 T 11-10-2018 UP17_10475 3fabfe1046b1ea607dc73e349c514d7e 250 Pfam PF00069 Protein kinase domain 15 167 1.9E-31 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 UP17_10475 3fabfe1046b1ea607dc73e349c514d7e 250 SUPERFAMILY SSF56112 5 195 1.89E-41 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_10475 3fabfe1046b1ea607dc73e349c514d7e 250 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 21 44 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 UP17_13815 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_13815 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_13815 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_13815 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_19125 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_19125 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_19125 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_19125 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_10145 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_10145 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_10145 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_10145 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_08570 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_08570 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_08570 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_08570 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_13740 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_13740 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_13740 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_13740 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_11235 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_11235 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_11235 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_11235 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_17375 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_17375 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_17375 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_17375 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_19505 64bdf5c633b8dea0056b6afe63b1e971 286 Gene3D G3DSA:3.30.420.10 120 276 4.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_19505 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF13276 HTH-like domain 39 94 1.8E-10 T 11-10-2018 IPR025948 HTH-like domain UP17_19505 64bdf5c633b8dea0056b6afe63b1e971 286 Pfam PF00665 Integrase core domain 124 238 2.0E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_19505 64bdf5c633b8dea0056b6afe63b1e971 286 SUPERFAMILY SSF53098 116 278 1.11E-28 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_16200 24a1cb7fccc027228164cd40c995578f 856 Gene3D G3DSA:3.20.70.20 116 325 1.6E-42 T 11-10-2018 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 Pfam PF02867 Ribonucleotide reductase, barrel domain 188 767 8.3E-123 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 SUPERFAMILY SSF51998 129 831 4.58E-144 T 11-10-2018 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 131 777 7.6E-179 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 Gene3D G3DSA:3.20.70.20 348 782 5.7E-120 T 11-10-2018 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 263 282 3.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 574 597 3.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 639 666 3.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 546 568 3.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 531 3.0E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_16200 24a1cb7fccc027228164cd40c995578f 856 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 131 181 6.1E-7 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 Pfam PF04055 Radical SAM superfamily 64 225 3.1E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 SMART SM00729 58 263 1.2E-16 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 Gene3D G3DSA:3.20.20.70 2 271 1.1E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 Hamap MF_00206 Lipoyl synthase [lipA]. 1 296 148.601 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 4 46 2.2E-11 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 TIGRFAM TIGR00510 lipA: lipoyl synthase 5 294 9.1E-123 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 SUPERFAMILY SSF102114 23 288 1.27E-65 T 11-10-2018 UP17_23085 feb048118ea55fb72d55b1602089bba4 304 PIRSF PIRSF005963 1 303 1.1E-137 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 314 377 5.1E-18 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 64 127 1.3E-17 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 137 292 3.1E-27 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 SUPERFAMILY SSF56014 393 528 5.5E-31 T 11-10-2018 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 PRINTS PR00397 Sirohaem Fe-binding site signature 392 410 4.3E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.3E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 SUPERFAMILY SSF56014 137 297 2.62E-37 T 11-10-2018 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 SUPERFAMILY SSF55124 272 403 1.26E-24 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 Gene3D G3DSA:3.90.480.20 16 379 1.6E-131 T 11-10-2018 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 395 533 4.0E-11 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 436 452 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 Gene3D G3DSA:3.30.413.10 392 529 6.0E-32 T 11-10-2018 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 SUPERFAMILY SSF55124 9 136 1.64E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_12950 f915206e6fc45fe53de6d7c4f7f5680c 541 Gene3D G3DSA:3.30.413.10 129 309 1.6E-131 T 11-10-2018 UP17_12935 c4c05f5dee912371b5640fc94f17fe81 253 SUPERFAMILY SSF53800 1 242 1.31E-50 T 11-10-2018 UP17_12935 c4c05f5dee912371b5640fc94f17fe81 253 Gene3D G3DSA:3.40.50.1400 1 123 4.6E-25 T 11-10-2018 UP17_12935 c4c05f5dee912371b5640fc94f17fe81 253 Gene3D G3DSA:3.40.50.1400 124 243 2.2E-22 T 11-10-2018 UP17_12935 c4c05f5dee912371b5640fc94f17fe81 253 Pfam PF01903 CbiX 9 114 5.0E-26 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 UP17_12935 c4c05f5dee912371b5640fc94f17fe81 253 Pfam PF01903 CbiX 134 236 2.7E-20 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 256 1.1E-61 T 11-10-2018 UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 258 4.5E-110 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 Gene3D G3DSA:3.40.50.720 1 258 3.1E-79 T 11-10-2018 UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 SUPERFAMILY SSF51735 3 257 4.53E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 5.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 5.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19745 7b964a438ce24f1fc2facbcfee81ec35 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.4E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 2.1E-178 T 11-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 Gene3D G3DSA:3.30.70.2740 336 417 1.9E-14 T 11-10-2018 UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 Gene3D G3DSA:3.30.465.40 3 237 2.9E-77 T 11-10-2018 UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 Gene3D G3DSA:1.10.45.10 418 458 4.9E-13 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 SUPERFAMILY SSF55103 220 459 1.37E-65 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 SUPERFAMILY SSF56176 9 217 1.68E-72 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 457 6.0E-71 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 UP17_17990 45baa348c62fc57700766ba9cb5cdf9b 470 Pfam PF01565 FAD binding domain 41 180 2.2E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 244 253 5.0E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 5.0E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 279 5.0E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 5.0E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 3 291 1.6E-91 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 288 1.4E-23 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 Gene3D G3DSA:3.40.50.1370 127 270 3.1E-97 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 139 5.5E-36 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 Gene3D G3DSA:3.40.50.1370 6 287 3.1E-97 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 2.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 2.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 2.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 2.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 248 253 2.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 272 286 2.2E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 SUPERFAMILY SSF53671 2 292 5.5E-88 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 UP17_07430 40de5d09fc74923600799edb717ebbf0 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 293 38.838 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 396 2.4E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 Gene3D G3DSA:3.40.1390.10 2 85 1.0E-21 T 11-10-2018 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 458 6.8E-143 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 459 34.662 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 Pfam PF08245 Mur ligase middle domain 111 299 7.4E-52 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 Pfam PF01225 Mur ligase family, catalytic domain 27 101 9.1E-15 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 SUPERFAMILY SSF53244 319 458 1.85E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 SUPERFAMILY SSF53623 105 316 5.36E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 SUPERFAMILY SSF63418 8 103 1.22E-24 T 11-10-2018 IPR035911 MurE/MurF, N-terminal UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 Gene3D G3DSA:3.90.190.20 318 460 5.4E-44 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_01335 10e827abf0d1dd20d8f8aa186b142c86 460 Gene3D G3DSA:3.40.1190.10 87 317 1.9E-70 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_00890 44cda2300e714a554bc8a1061af01cab 250 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 52 239 8.6E-77 T 11-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB UP17_00890 44cda2300e714a554bc8a1061af01cab 250 SUPERFAMILY SSF88713 14 239 1.8E-45 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_00890 44cda2300e714a554bc8a1061af01cab 250 Gene3D G3DSA:3.20.20.370 48 249 1.1E-53 T 11-10-2018 UP17_00890 44cda2300e714a554bc8a1061af01cab 250 Pfam PF01522 Polysaccharide deacetylase 51 172 1.1E-21 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 UP17_03470 99112ffe8f07d5684811117c785cb841 301 Gene3D G3DSA:3.40.50.300 1 235 1.9E-67 T 11-10-2018 UP17_03470 99112ffe8f07d5684811117c785cb841 301 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_03470 99112ffe8f07d5684811117c785cb841 301 Pfam PF00005 ABC transporter 19 157 8.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03470 99112ffe8f07d5684811117c785cb841 301 SMART SM00382 27 204 1.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_03470 99112ffe8f07d5684811117c785cb841 301 SUPERFAMILY SSF52540 3 219 8.95E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03470 99112ffe8f07d5684811117c785cb841 301 Pfam PF13732 Domain of unknown function (DUF4162) 212 298 7.3E-9 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Pfam PF00877 NlpC/P60 family 115 206 3.3E-10 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Pfam PF00877 NlpC/P60 family 290 389 1.8E-18 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Gene3D G3DSA:3.10.350.10 209 258 1.6E-8 T 11-10-2018 IPR036779 LysM domain superfamily UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Gene3D G3DSA:3.10.350.10 26 83 1.2E-12 T 11-10-2018 IPR036779 LysM domain superfamily UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Pfam PF01476 LysM domain 216 255 1.3E-6 T 11-10-2018 IPR018392 LysM domain UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Pfam PF01476 LysM domain 34 75 4.3E-11 T 11-10-2018 IPR018392 LysM domain UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 SMART SM00257 33 76 1.4E-10 T 11-10-2018 IPR018392 LysM domain UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 SMART SM00257 215 258 1.3E-5 T 11-10-2018 IPR018392 LysM domain UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 SUPERFAMILY SSF54001 84 205 6.87E-13 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 SUPERFAMILY SSF54106 33 75 2.22E-9 T 11-10-2018 UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Gene3D G3DSA:3.90.1720.10 259 389 1.0E-25 T 11-10-2018 UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 SUPERFAMILY SSF54106 216 257 8.76E-8 T 11-10-2018 UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 Gene3D G3DSA:3.90.1720.10 88 208 1.9E-16 T 11-10-2018 UP17_18960 c7e31f0be05c794240821e8a3340b8b1 400 SUPERFAMILY SSF54001 275 395 2.45E-24 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_15645 96491555cbe19aaadfb42e8e3a85eba0 179 Pfam PF07670 Nucleoside recognition 48 147 1.7E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 UP17_18375 79b59c20748a26aefde6cfcedb2e7842 309 Pfam PF00892 EamA-like transporter family 9 147 4.7E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_18375 79b59c20748a26aefde6cfcedb2e7842 309 Pfam PF00892 EamA-like transporter family 159 285 6.7E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_18375 79b59c20748a26aefde6cfcedb2e7842 309 TIGRFAM TIGR00688 rarD: protein RarD 8 264 2.9E-76 T 11-10-2018 IPR004626 RarD protein GO:0005887 UP17_18375 79b59c20748a26aefde6cfcedb2e7842 309 SUPERFAMILY SSF103481 195 288 3.92E-8 T 11-10-2018 UP17_18375 79b59c20748a26aefde6cfcedb2e7842 309 SUPERFAMILY SSF103481 42 148 2.22E-10 T 11-10-2018 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 SUPERFAMILY SSF52343 263 398 3.54E-34 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 Gene3D G3DSA:1.10.490.10 1 145 1.9E-58 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 Pfam PF00175 Oxidoreductase NAD-binding domain 271 377 8.0E-14 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 SUPERFAMILY SSF46458 2 143 2.33E-41 T 11-10-2018 IPR009050 Globin-like superfamily UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 Pfam PF00970 Oxidoreductase FAD-binding domain 157 260 1.8E-11 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 SUPERFAMILY SSF63380 151 260 3.58E-30 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 Gene3D G3DSA:3.40.50.80 263 401 8.5E-32 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 Gene3D G3DSA:2.40.30.10 152 260 2.1E-37 T 11-10-2018 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 Pfam PF00042 Globin 8 103 5.8E-11 T 11-10-2018 IPR000971 Globin GO:0020037 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 7.9E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 364 372 7.9E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 270 289 7.9E-9 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 UP17_15000 988eaae582b3422c7a0d708da08dbf82 402 Hamap MF_01252 Flavohemoprotein [hmp]. 1 402 53.932 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 UP17_14785 58c65bef714d2cc2699f852010ecefb5 294 Gene3D G3DSA:1.10.8.1080 218 294 2.0E-29 T 11-10-2018 UP17_14785 58c65bef714d2cc2699f852010ecefb5 294 Gene3D G3DSA:3.40.50.10490 1 217 2.4E-75 T 11-10-2018 UP17_14785 58c65bef714d2cc2699f852010ecefb5 294 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 184 201 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 UP17_14785 58c65bef714d2cc2699f852010ecefb5 294 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 294 42.711 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 UP17_14785 58c65bef714d2cc2699f852010ecefb5 294 SUPERFAMILY SSF53697 4 248 1.31E-69 T 11-10-2018 UP17_14785 58c65bef714d2cc2699f852010ecefb5 294 Pfam PF01380 SIS domain 128 207 5.8E-9 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_14785 58c65bef714d2cc2699f852010ecefb5 294 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 5 294 4.0E-123 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 UP17_20355 382465231af3b24c4796e4e6030f1847 141 SUPERFAMILY SSF54637 2 139 5.85E-47 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_20355 382465231af3b24c4796e4e6030f1847 141 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 6.9E-58 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_20355 382465231af3b24c4796e4e6030f1847 141 Gene3D G3DSA:3.10.129.10 1 139 7.3E-59 T 11-10-2018 UP17_20355 382465231af3b24c4796e4e6030f1847 141 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 33.965 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_20355 382465231af3b24c4796e4e6030f1847 141 Pfam PF07977 FabA-like domain 13 133 1.1E-37 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 399 547 2.2E-51 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 SUPERFAMILY SSF52467 199 367 9.57E-59 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 207 342 1.1E-42 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 Gene3D G3DSA:3.40.50.1220 201 366 5.6E-57 T 11-10-2018 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 177 1.4E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 SUPERFAMILY SSF52518 16 183 7.37E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 Gene3D G3DSA:3.40.50.970 369 570 4.6E-71 T 11-10-2018 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 SUPERFAMILY SSF52518 377 568 5.9E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 568 9.6E-257 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 Gene3D G3DSA:3.40.50.970 9 190 7.4E-70 T 11-10-2018 UP17_17740 35bce48fe6a1748ae8999207dfbd631b 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 436 455 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 UP17_10575 854787b1e8c7fd38092c7dbf2b914eb9 227 SUPERFAMILY SSF48613 2 221 2.82E-78 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 UP17_10575 854787b1e8c7fd38092c7dbf2b914eb9 227 Pfam PF03070 TENA/THI-4/PQQC family 9 214 6.8E-63 T 11-10-2018 IPR004305 Thiaminase-2/PQQC UP17_10575 854787b1e8c7fd38092c7dbf2b914eb9 227 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 214 3.9E-80 T 11-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 UP17_10575 854787b1e8c7fd38092c7dbf2b914eb9 227 Gene3D G3DSA:1.20.910.10 1 219 1.5E-69 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 UP17_14935 1f67560a0a30e4302364e0755181d96f 322 Gene3D G3DSA:3.40.800.10 2 308 6.0E-99 T 11-10-2018 UP17_14935 1f67560a0a30e4302364e0755181d96f 322 PRINTS PR00116 Arginase signature 116 131 2.7E-11 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_14935 1f67560a0a30e4302364e0755181d96f 322 PRINTS PR00116 Arginase signature 229 258 2.7E-11 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_14935 1f67560a0a30e4302364e0755181d96f 322 PIRSF PIRSF036979 9 307 2.0E-89 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_14935 1f67560a0a30e4302364e0755181d96f 322 SUPERFAMILY SSF52768 19 304 6.12E-90 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_14935 1f67560a0a30e4302364e0755181d96f 322 TIGRFAM TIGR01230 agmatinase: agmatinase 19 299 3.5E-61 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 UP17_14935 1f67560a0a30e4302364e0755181d96f 322 ProSitePatterns PS01053 Arginase family signature. 232 253 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 UP17_14935 1f67560a0a30e4302364e0755181d96f 322 Pfam PF00491 Arginase family 30 300 2.5E-81 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 PIRSF PIRSF000124 1 414 2.0E-81 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 Gene3D G3DSA:3.40.50.720 1 196 1.3E-69 T 11-10-2018 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 SUPERFAMILY SSF51735 1 192 3.76E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 284 3.0E-25 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 308 402 1.2E-27 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 SUPERFAMILY SSF48179 198 291 9.35E-26 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 SMART SM00984 308 403 3.5E-34 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 PIRSF PIRSF500136 1 419 1.4E-153 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 177 2.9E-54 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 399 4.1E-133 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 SUPERFAMILY SSF52413 301 404 1.57E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 UP17_22045 12d8fde69ad175b4f0d6a5259cf6d4e7 433 Gene3D G3DSA:3.40.50.720 197 420 2.9E-66 T 11-10-2018 UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 Hamap MF_01491 Ribonuclease J [rnj]. 3 557 45.585 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 PIRSF PIRSF004803 2 557 4.1E-232 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 Gene3D G3DSA:3.60.15.10 10 438 2.3E-178 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 SUPERFAMILY SSF56281 9 426 5.13E-96 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 Gene3D G3DSA:3.40.50.10710 207 367 2.3E-178 T 11-10-2018 UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 366 394 - T 11-10-2018 IPR001587 Ribonuclease J, conserved site UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 Pfam PF00753 Metallo-beta-lactamase superfamily 20 166 3.5E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 365 407 9.2E-11 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 SMART SM00849 20 214 3.7E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 Gene3D G3DSA:3.10.20.580 451 557 1.1E-36 T 11-10-2018 UP17_19580 f2e6dc81b4a56c77d65fd9be38c665cb 557 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 555 1.1E-192 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 UP17_08955 13b1cb2a03e821bf83ca3ffe33325578 269 Pfam PF11155 Domain of unknown function (DUF2935) 140 256 3.8E-31 T 11-10-2018 IPR021328 Protein of unknown function DUF2935 UP17_08955 13b1cb2a03e821bf83ca3ffe33325578 269 Pfam PF11155 Domain of unknown function (DUF2935) 11 126 3.5E-31 T 11-10-2018 IPR021328 Protein of unknown function DUF2935 UP17_08955 13b1cb2a03e821bf83ca3ffe33325578 269 SUPERFAMILY SSF158430 5 132 7.98E-39 T 11-10-2018 UP17_08955 13b1cb2a03e821bf83ca3ffe33325578 269 SUPERFAMILY SSF158430 137 260 3.27E-39 T 11-10-2018 UP17_08955 13b1cb2a03e821bf83ca3ffe33325578 269 Gene3D G3DSA:1.20.1260.120 2 269 3.2E-113 T 11-10-2018 UP17_24690 5e35881a0b9c92b431b536f13a6040a4 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 252 2.1E-59 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_24690 5e35881a0b9c92b431b536f13a6040a4 259 SUPERFAMILY SSF53850 3 254 5.04E-61 T 11-10-2018 UP17_24690 5e35881a0b9c92b431b536f13a6040a4 259 SMART SM00062 38 253 4.6E-55 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_24690 5e35881a0b9c92b431b536f13a6040a4 259 SMART SM00079 38 252 0.0013 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 UP17_24690 5e35881a0b9c92b431b536f13a6040a4 259 Gene3D G3DSA:3.40.190.10 40 250 5.3E-61 T 11-10-2018 UP17_24690 5e35881a0b9c92b431b536f13a6040a4 259 Gene3D G3DSA:3.40.190.10 122 215 5.3E-61 T 11-10-2018 UP17_24690 5e35881a0b9c92b431b536f13a6040a4 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site UP17_13705 6c5380ea420ebd29e3d8600799f909d1 512 Gene3D G3DSA:2.60.120.560 358 510 2.2E-38 T 11-10-2018 UP17_13705 6c5380ea420ebd29e3d8600799f909d1 512 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 358 506 2.5E-27 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal UP17_13705 6c5380ea420ebd29e3d8600799f909d1 512 SMART SM00640 44 472 3.5E-114 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 UP17_13705 6c5380ea420ebd29e3d8600799f909d1 512 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 44 344 1.5E-78 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal UP17_13705 6c5380ea420ebd29e3d8600799f909d1 512 Gene3D G3DSA:2.115.10.20 41 354 1.4E-95 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily UP17_13705 6c5380ea420ebd29e3d8600799f909d1 512 SUPERFAMILY SSF49899 353 509 3.17E-27 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily UP17_13705 6c5380ea420ebd29e3d8600799f909d1 512 SUPERFAMILY SSF75005 36 343 8.63E-79 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 Gene3D G3DSA:1.10.287.130 206 265 8.1E-51 T 11-10-2018 UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 412 4.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 264 1.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 SUPERFAMILY SSF47384 197 265 9.42E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 SUPERFAMILY SSF55874 268 416 6.68E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 SMART SM00387 308 414 5.4E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 SMART SM00388 202 268 5.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 Gene3D G3DSA:3.30.565.10 266 411 8.1E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 411 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 392 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20110 732e3e62cb4ccd64a512751087437bbe 420 Pfam PF07694 5TMR of 5TMR-LYT 25 176 2.4E-15 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 UP17_23305 294bc186d1a39113b66f5a9b944cfdce 557 SMART SM00631 77 281 5.7E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_23305 294bc186d1a39113b66f5a9b944cfdce 557 Pfam PF00246 Zinc carboxypeptidase 90 201 1.5E-18 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_23305 294bc186d1a39113b66f5a9b944cfdce 557 SUPERFAMILY SSF53187 77 337 5.62E-39 T 11-10-2018 UP17_23305 294bc186d1a39113b66f5a9b944cfdce 557 Gene3D G3DSA:3.40.630.10 64 358 1.0E-34 T 11-10-2018 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 SUPERFAMILY SSF47323 439 557 1.11E-23 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 Gene3D G3DSA:3.30.1360.70 1 103 3.2E-26 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 Gene3D G3DSA:1.10.730.10 439 557 8.9E-26 T 11-10-2018 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 SMART SM00836 445 557 3.0E-25 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 557 3.3E-150 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 SUPERFAMILY SSF52374 109 438 5.63E-96 T 11-10-2018 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 Pfam PF05746 DALR anticodon binding domain 445 557 2.0E-21 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 Pfam PF00750 tRNA synthetases class I (R) 92 430 5.8E-103 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 81 3.0E-15 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 Gene3D G3DSA:3.40.50.620 108 438 3.8E-126 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 292 313 3.0E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 111 126 3.0E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 126 142 3.0E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 150 163 3.0E-21 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 SMART SM01016 3 82 1.7E-19 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 557 24.244 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_20785 6d8aed5d6c0c724af67950907b58cc07 557 SUPERFAMILY SSF55190 5 103 2.09E-20 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Gene3D G3DSA:1.10.3210.10 1 196 5.9E-88 T 11-10-2018 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Gene3D G3DSA:3.30.70.260 653 732 3.3E-18 T 11-10-2018 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 729 1.4E-260 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Pfam PF02824 TGS domain 394 453 1.2E-22 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 SUPERFAMILY SSF109604 10 196 7.85E-77 T 11-10-2018 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 SMART SM00471 46 158 5.9E-10 T 11-10-2018 IPR003607 HD/PDEase domain UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 SMART SM00954 240 350 1.2E-69 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Gene3D G3DSA:3.30.460.10 198 330 8.5E-55 T 11-10-2018 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 SUPERFAMILY SSF81301 185 398 4.74E-67 T 11-10-2018 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Pfam PF13291 ACT domain 653 729 1.7E-21 T 11-10-2018 IPR002912 ACT domain UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Pfam PF13328 HD domain 31 180 6.4E-53 T 11-10-2018 IPR003607 HD/PDEase domain UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 SUPERFAMILY SSF55021 655 732 6.66E-13 T 11-10-2018 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Gene3D G3DSA:3.10.20.30 387 459 1.8E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 1.7E-39 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 UP17_17370 ae602da9e1fa12e684db6b0ca7403c94 732 SUPERFAMILY SSF81271 381 453 1.42E-22 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 5.5E-78 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 SUPERFAMILY SSF56059 83 350 1.94E-66 T 11-10-2018 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.2E-34 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 SMART SM00878 336 441 1.5E-46 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 Gene3D G3DSA:3.30.470.20 87 440 3.8E-153 T 11-10-2018 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 Gene3D G3DSA:3.30.1490.20 131 202 3.8E-153 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 SUPERFAMILY SSF51246 331 444 6.8E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 SUPERFAMILY SSF52440 1 113 2.66E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 Gene3D G3DSA:3.40.50.20 1 85 2.6E-35 T 11-10-2018 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_11100 b9ccafaf173aee1cca4e3ced3353085f 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.0E-46 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 828 835 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SUPERFAMILY SSF52440 548 666 5.75E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 421 538 1.3E-42 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Gene3D G3DSA:3.40.50.20 545 653 1.2E-45 T 11-10-2018 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.2E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.2E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 2.2E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.2E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.2E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 2.2E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.2E-63 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SUPERFAMILY SSF56059 128 399 4.6E-109 T 11-10-2018 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SUPERFAMILY SSF56059 664 925 1.94E-102 T 11-10-2018 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1055 13.24 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.526 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Gene3D G3DSA:3.40.50.20 1 116 1.3E-48 T 11-10-2018 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Gene3D G3DSA:3.40.50.1380 929 1061 2.9E-34 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SMART SM01096 418 538 2.1E-69 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SUPERFAMILY SSF52440 1 127 5.75E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SMART SM00851 947 1034 3.1E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SUPERFAMILY SSF52335 934 1050 4.32E-30 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily UP17_07445 863976d5da776c81f32006a6f37f2670 1068 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 700 714 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Gene3D G3DSA:1.10.1030.10 403 544 5.7E-48 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Pfam PF02142 MGS-like domain 949 1034 8.6E-18 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain UP17_07445 863976d5da776c81f32006a6f37f2670 1068 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1045 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 SUPERFAMILY SSF48108 395 544 8.76E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Gene3D G3DSA:3.30.470.20 657 927 8.7E-108 T 11-10-2018 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 2.7E-79 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 665 864 1.7E-38 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07445 863976d5da776c81f32006a6f37f2670 1068 Gene3D G3DSA:3.30.470.20 120 401 1.2E-124 T 11-10-2018 UP17_07600 281e8316b841c316087438740ccd931f 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 1.5E-47 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain UP17_07600 281e8316b841c316087438740ccd931f 315 SUPERFAMILY SSF55048 129 193 3.4E-14 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding UP17_07600 281e8316b841c316087438740ccd931f 315 Gene3D G3DSA:3.40.366.10 5 286 3.8E-98 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 UP17_07600 281e8316b841c316087438740ccd931f 315 Pfam PF00698 Acyl transferase domain 6 287 6.8E-42 T 11-10-2018 IPR014043 Acyl transferase UP17_07600 281e8316b841c316087438740ccd931f 315 PIRSF PIRSF000446 1 311 3.2E-121 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 UP17_07600 281e8316b841c316087438740ccd931f 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 5.0E-117 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 UP17_07600 281e8316b841c316087438740ccd931f 315 SUPERFAMILY SSF52151 4 310 6.02E-81 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase UP17_07600 281e8316b841c316087438740ccd931f 315 Gene3D G3DSA:3.30.70.250 124 197 3.8E-98 T 11-10-2018 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 Pfam PF00108 Thiolase, N-terminal domain 4 262 8.7E-103 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 Gene3D G3DSA:3.40.47.10 6 275 1.0E-160 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 Pfam PF02803 Thiolase, C-terminal domain 270 391 6.8E-53 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 Gene3D G3DSA:3.40.47.10 126 389 1.0E-160 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 SUPERFAMILY SSF53901 3 269 8.54E-91 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 PIRSF PIRSF000429 1 391 7.0E-138 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 SUPERFAMILY SSF53901 271 391 1.8E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19735 4baba68ccebfad34536ad78c4d0812b7 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 4.2E-151 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_02280 36c4d0628bcdae6d9d8957b5bd403789 279 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 210 3.3E-58 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_02280 36c4d0628bcdae6d9d8957b5bd403789 279 Gene3D G3DSA:3.30.70.120 189 263 2.9E-22 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_02280 36c4d0628bcdae6d9d8957b5bd403789 279 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 1.2E-20 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 UP17_02280 36c4d0628bcdae6d9d8957b5bd403789 279 PIRSF PIRSF006483 1 278 4.7E-79 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_12565 46f99f9a96ff6be72fa0806fb96b78ae 399 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 UP17_12565 46f99f9a96ff6be72fa0806fb96b78ae 399 Gene3D G3DSA:1.20.1090.10 187 388 5.4E-60 T 11-10-2018 UP17_12565 46f99f9a96ff6be72fa0806fb96b78ae 399 Gene3D G3DSA:3.40.50.1970 3 185 3.3E-50 T 11-10-2018 UP17_12565 46f99f9a96ff6be72fa0806fb96b78ae 399 SUPERFAMILY SSF56796 8 386 1.09E-110 T 11-10-2018 UP17_12565 46f99f9a96ff6be72fa0806fb96b78ae 399 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 379 2.9E-112 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Pfam PF00476 DNA polymerase family A 498 871 3.0E-160 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SMART SM00279 173 208 1.1E-16 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SMART SM00474 298 464 1.8E-11 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SMART SM00482 631 838 1.9E-119 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Gene3D G3DSA:1.10.150.20 655 798 2.9E-109 T 11-10-2018 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SUPERFAMILY SSF53098 304 465 1.06E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Gene3D G3DSA:3.40.50.1010 5 278 5.7E-96 T 11-10-2018 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 170 7.3E-52 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 266 1.2E-32 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Gene3D G3DSA:1.20.1060.10 489 603 2.5E-43 T 11-10-2018 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SUPERFAMILY SSF88723 3 170 8.41E-53 T 11-10-2018 IPR029060 PIN-like domain superfamily UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Gene3D G3DSA:1.10.150.20 174 247 5.7E-96 T 11-10-2018 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SUPERFAMILY SSF47807 172 287 1.32E-32 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SUPERFAMILY SSF56672 468 874 1.22E-155 T 11-10-2018 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Gene3D G3DSA:3.30.420.10 299 488 4.2E-61 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 SMART SM00475 3 262 3.3E-142 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 TIGRFAM TIGR00593 pola: DNA polymerase I 5 874 0.0 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 Gene3D G3DSA:3.30.70.370 609 870 2.9E-109 T 11-10-2018 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 ProSitePatterns PS00447 DNA polymerase family A signature. 700 719 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 821 834 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 646 669 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 770 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 600 622 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 623 638 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 725 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 807 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 676 689 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18125 07181c36ef510d0142c0f9006b152f1e 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 737 748 6.5E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SMART SM00086 196 238 2.0E-7 T 11-10-2018 IPR001610 PAC motif UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SMART SM00086 324 366 2.2E-7 T 11-10-2018 IPR001610 PAC motif UP17_09975 d19c3d8992f085ac492e17268011afd2 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 264 373 7.2E-15 T 11-10-2018 IPR000014 PAS domain UP17_09975 d19c3d8992f085ac492e17268011afd2 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 131 245 6.5E-16 T 11-10-2018 IPR000014 PAS domain UP17_09975 d19c3d8992f085ac492e17268011afd2 575 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 65 2.6E-7 T 11-10-2018 IPR000014 PAS domain UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Gene3D G3DSA:3.30.565.10 446 575 6.1E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SUPERFAMILY SSF55874 450 575 1.31E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Pfam PF00989 PAS fold 16 60 1.8E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 575 2.3E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SUPERFAMILY SSF55785 136 232 5.58E-25 T 11-10-2018 IPR035965 PAS domain superfamily UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Pfam PF13426 PAS domain 264 362 2.5E-14 T 11-10-2018 IPR000014 PAS domain UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Gene3D G3DSA:3.30.450.20 259 403 7.2E-33 T 11-10-2018 UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Gene3D G3DSA:3.30.450.20 120 258 6.1E-31 T 11-10-2018 UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SMART SM00091 252 321 0.17 T 11-10-2018 IPR000014 PAS domain UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SMART SM00091 8 74 6.3E-5 T 11-10-2018 IPR000014 PAS domain UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SMART SM00091 124 190 6.3 T 11-10-2018 IPR000014 PAS domain UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Pfam PF07730 Histidine kinase 387 448 1.7E-11 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Gene3D G3DSA:3.30.450.20 15 109 2.4E-9 T 11-10-2018 UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SMART SM00387 485 575 7.8E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SUPERFAMILY SSF55785 19 107 6.93E-10 T 11-10-2018 IPR035965 PAS domain superfamily UP17_09975 d19c3d8992f085ac492e17268011afd2 575 Pfam PF08447 PAS fold 149 231 1.8E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 UP17_09975 d19c3d8992f085ac492e17268011afd2 575 SUPERFAMILY SSF55785 261 360 2.79E-27 T 11-10-2018 IPR035965 PAS domain superfamily UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 Gene3D G3DSA:3.30.2130.30 8 246 2.2E-123 T 11-10-2018 UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 Gene3D G3DSA:3.40.50.150 161 365 2.2E-123 T 11-10-2018 UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 Pfam PF01170 Putative RNA methylase family UPF0020 163 366 8.5E-64 T 11-10-2018 IPR000241 Putative RNA methylase domain UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 SMART SM00981 57 155 6.9E-9 T 11-10-2018 IPR004114 THUMP domain GO:0003723 UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 Pfam PF02926 THUMP domain 14 154 1.3E-11 T 11-10-2018 IPR004114 THUMP domain GO:0003723 UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 SUPERFAMILY SSF53335 142 369 3.24E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_15095 71379e6852226f4dc7e7ba5746db5e0e 382 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 11-10-2018 IPR000241 Putative RNA methylase domain UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Gene3D G3DSA:3.20.20.70 427 778 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 SUPERFAMILY SSF51395 451 1171 1.25E-162 T 11-10-2018 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 SUPERFAMILY SSF56235 26 401 2.12E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Gene3D G3DSA:2.160.20.60 1205 1495 1.5E-59 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Pfam PF04898 Glutamate synthase central domain 452 731 1.1E-64 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Pfam PF00310 Glutamine amidotransferases class-II 26 378 1.3E-49 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 SUPERFAMILY SSF69336 1215 1490 2.75E-42 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Gene3D G3DSA:3.20.20.70 476 1169 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Pfam PF01645 Conserved region in glutamate synthase 789 1153 1.7E-105 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Pfam PF01493 GXGXG motif 1263 1422 3.0E-20 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 UP17_03860 daf1d87b65660531823eb5b41c81ee22 1495 Gene3D G3DSA:3.60.20.10 26 537 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_07130 fda5134fb051dab29cb9716d49244689 209 SUPERFAMILY SSF81452 21 206 9.16E-53 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07130 fda5134fb051dab29cb9716d49244689 209 Gene3D G3DSA:1.20.120.80 21 208 2.2E-50 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07130 fda5134fb051dab29cb9716d49244689 209 Pfam PF00510 Cytochrome c oxidase subunit III 27 206 7.5E-18 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_12380 735359a39e11d28164352b9ef551af40 303 Gene3D G3DSA:3.10.520.20 1 299 9.7E-74 T 11-10-2018 UP17_12380 735359a39e11d28164352b9ef551af40 303 SUPERFAMILY SSF143631 3 284 3.14E-71 T 11-10-2018 IPR003374 ApbE-like superfamily UP17_12380 735359a39e11d28164352b9ef551af40 303 Pfam PF02424 ApbE family 8 275 1.8E-63 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 UP17_12380 735359a39e11d28164352b9ef551af40 303 PIRSF PIRSF006268 1 302 1.1E-60 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 UP17_12835 2e5e962a01625bbb9aabc2e2f726dee3 189 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 183 3.2E-48 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 UP17_12835 2e5e962a01625bbb9aabc2e2f726dee3 189 SUPERFAMILY SSF53254 2 188 5.89E-53 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_12835 2e5e962a01625bbb9aabc2e2f726dee3 189 Gene3D G3DSA:3.40.50.1240 1 189 4.9E-52 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_12835 2e5e962a01625bbb9aabc2e2f726dee3 189 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 UP17_12835 2e5e962a01625bbb9aabc2e2f726dee3 189 SMART SM00855 3 146 3.6E-23 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 UP17_12835 2e5e962a01625bbb9aabc2e2f726dee3 189 PIRSF PIRSF000709 2 157 1.2E-8 T 11-10-2018 UP17_00430 73a09ca8f5188ab5bb5773ba82ead166 119 Pfam PF02152 Dihydroneopterin aldolase 4 115 1.7E-35 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 UP17_00430 73a09ca8f5188ab5bb5773ba82ead166 119 SUPERFAMILY SSF55620 2 119 2.72E-39 T 11-10-2018 UP17_00430 73a09ca8f5188ab5bb5773ba82ead166 119 Gene3D G3DSA:3.30.1130.10 1 119 2.0E-45 T 11-10-2018 UP17_00430 73a09ca8f5188ab5bb5773ba82ead166 119 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 2.0E-36 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 UP17_00430 73a09ca8f5188ab5bb5773ba82ead166 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 1.4E-41 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 UP17_00430 73a09ca8f5188ab5bb5773ba82ead166 119 SMART SM00905 4 117 6.3E-50 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 UP17_11700 6d319f850a078f19543bc9eb830a9a81 494 Pfam PF00474 Sodium:solute symporter family 33 428 2.1E-22 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_11700 6d319f850a078f19543bc9eb830a9a81 494 Gene3D G3DSA:1.20.1730.10 22 493 3.7E-34 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 SUPERFAMILY SSF47005 118 158 5.23E-10 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 Gene3D G3DSA:4.10.320.10 115 160 4.7E-14 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 SUPERFAMILY SSF51230 2 85 3.14E-27 T 11-10-2018 IPR011053 Single hybrid motif UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 SUPERFAMILY SSF52777 193 422 1.91E-81 T 11-10-2018 UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 Gene3D G3DSA:3.30.559.10 180 423 9.6E-86 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 195 422 5.1E-84 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 Pfam PF02817 e3 binding domain 119 153 2.1E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 Pfam PF00364 Biotin-requiring enzyme 3 75 1.8E-24 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_05220 d91a27d671e7de253dae5090474d4b6b 426 Gene3D G3DSA:2.40.50.100 1 79 2.6E-27 T 11-10-2018 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 Gene3D G3DSA:3.40.50.970 382 579 1.7E-67 T 11-10-2018 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 445 1.0E-151 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 Gene3D G3DSA:3.40.50.970 1 174 1.1E-71 T 11-10-2018 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 PIRSF PIRSF004983 1 576 2.4E-203 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 Gene3D G3DSA:3.40.50.1220 199 379 1.4E-54 T 11-10-2018 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 176 1.9E-40 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 Pfam PF16582 Middle domain of thiamine pyrophosphate 219 403 1.9E-14 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 438 552 7.0E-9 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 SUPERFAMILY SSF52518 377 578 1.61E-30 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 SUPERFAMILY SSF52467 167 364 8.51E-13 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 SUPERFAMILY SSF52518 10 179 3.73E-36 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_22190 9f43a02df03e3da30620fd788f947ca7 583 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 570 37.514 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 163 2.9E-36 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 Gene3D G3DSA:3.10.20.80 1 73 5.0E-31 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 SUPERFAMILY SSF55200 77 165 2.35E-31 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 165 28.242 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 71 7.0E-30 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 SUPERFAMILY SSF54364 2 73 1.28E-27 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 Gene3D G3DSA:3.30.110.10 74 166 8.8E-36 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 UP17_18060 1e57ed9826aba66ad8ca2349db95609a 166 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 164 6.6E-71 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Pfam PF07549 SecD/SecF GG Motif 467 489 1.8E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 403 8.8E-105 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 418 33.06 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 474 721 5.2E-70 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Gene3D G3DSA:1.20.1640.10 247 419 4.4E-15 T 11-10-2018 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 189 396 1.5E-56 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 509 718 2.3E-53 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 SUPERFAMILY SSF82866 552 729 1.83E-36 T 11-10-2018 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Gene3D G3DSA:1.20.1640.10 542 728 5.5E-6 T 11-10-2018 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 SUPERFAMILY SSF82866 213 408 1.96E-40 T 11-10-2018 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Gene3D G3DSA:3.30.70.3400 34 121 1.9E-22 T 11-10-2018 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Gene3D G3DSA:1.20.1640.10 423 471 4.4E-15 T 11-10-2018 UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Pfam PF02355 Protein export membrane protein 237 399 2.9E-13 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Pfam PF02355 Protein export membrane protein 552 729 4.0E-65 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 PRINTS PR01755 Bacterial translocase SecF protein signature 669 684 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 PRINTS PR01755 Bacterial translocase SecF protein signature 633 651 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 PRINTS PR01755 Bacterial translocase SecF protein signature 472 487 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 PRINTS PR01755 Bacterial translocase SecF protein signature 585 599 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial UP17_17395 1c76b5d3a1e3586b16c75c4bd8f61417 753 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 445 732 26.402 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 Gene3D G3DSA:3.40.190.290 82 283 1.2E-72 T 11-10-2018 UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 Pfam PF03466 LysR substrate binding domain 87 282 2.3E-30 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 61 8.1E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 SUPERFAMILY SSF53850 88 283 5.57E-28 T 11-10-2018 UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 Gene3D G3DSA:1.10.10.10 3 81 3.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_11265 b8d1bc122330fd7054006a55e8a0f535 287 SUPERFAMILY SSF46785 6 111 4.46E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_06045 b7684ea6ae017d2a676b6f4178e3e424 192 SMART SM01118 4 192 1.5E-20 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 UP17_06045 b7684ea6ae017d2a676b6f4178e3e424 192 Gene3D G3DSA:2.40.320.10 1 191 1.6E-54 T 11-10-2018 UP17_06045 b7684ea6ae017d2a676b6f4178e3e424 192 PIRSF PIRSF012526 1 192 3.5E-69 T 11-10-2018 IPR009195 Uncharacterised protein family YjbK UP17_06045 b7684ea6ae017d2a676b6f4178e3e424 192 Pfam PF01928 CYTH domain 5 186 6.6E-28 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 UP17_06045 b7684ea6ae017d2a676b6f4178e3e424 192 SUPERFAMILY SSF55154 4 189 8.67E-31 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 UP17_01885 db596ed915dc7869ebd44498752409f8 689 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 445 462 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_01885 db596ed915dc7869ebd44498752409f8 689 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 542 664 2.6E-50 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_01885 db596ed915dc7869ebd44498752409f8 689 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 543 662 7.2E-46 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_01885 db596ed915dc7869ebd44498752409f8 689 Gene3D G3DSA:2.70.70.10 529 689 3.9E-61 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_01885 db596ed915dc7869ebd44498752409f8 689 Pfam PF02378 Phosphotransferase system, EIIC 13 346 3.4E-90 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_01885 db596ed915dc7869ebd44498752409f8 689 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 604 616 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_01885 db596ed915dc7869ebd44498752409f8 689 Pfam PF00367 phosphotransferase system, EIIB 435 467 5.2E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_01885 db596ed915dc7869ebd44498752409f8 689 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 507 3.2E-243 T 11-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 UP17_01885 db596ed915dc7869ebd44498752409f8 689 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 405 491 9.3E-23 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 UP17_01885 db596ed915dc7869ebd44498752409f8 689 Gene3D G3DSA:3.30.1360.60 431 508 5.5E-27 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_01885 db596ed915dc7869ebd44498752409f8 689 SUPERFAMILY SSF51261 540 680 8.89E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_01885 db596ed915dc7869ebd44498752409f8 689 SUPERFAMILY SSF55604 434 505 1.7E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_03915 bb6d76741bee08b59a62be64116e239a 314 SUPERFAMILY SSF51735 96 276 6.35E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03915 bb6d76741bee08b59a62be64116e239a 314 Gene3D G3DSA:3.40.50.720 15 302 9.9E-98 T 11-10-2018 UP17_03915 bb6d76741bee08b59a62be64116e239a 314 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 34 299 8.4E-15 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 UP17_03915 bb6d76741bee08b59a62be64116e239a 314 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 215 231 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site UP17_03915 bb6d76741bee08b59a62be64116e239a 314 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 276 5.3E-50 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UP17_03915 bb6d76741bee08b59a62be64116e239a 314 SUPERFAMILY SSF52283 14 118 5.74E-18 T 11-10-2018 UP17_03915 bb6d76741bee08b59a62be64116e239a 314 Gene3D G3DSA:3.40.50.720 92 272 9.9E-98 T 11-10-2018 UP17_04450 93ab27d43e90d0ef91e4cc1254f0c472 544 PIRSF PIRSF006060 1 530 4.2E-74 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_04450 93ab27d43e90d0ef91e4cc1254f0c472 544 Pfam PF13520 Amino acid permease 8 424 4.1E-49 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_04450 93ab27d43e90d0ef91e4cc1254f0c472 544 Gene3D G3DSA:1.20.1740.10 2 460 2.5E-80 T 11-10-2018 UP17_21655 94a8e37590f3618304c482921a104541 426 PRINTS PR00735 Glycosyl hydrolase family 8 signature 278 289 1.2E-22 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_21655 94a8e37590f3618304c482921a104541 426 PRINTS PR00735 Glycosyl hydrolase family 8 signature 235 252 1.2E-22 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_21655 94a8e37590f3618304c482921a104541 426 PRINTS PR00735 Glycosyl hydrolase family 8 signature 308 317 1.2E-22 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_21655 94a8e37590f3618304c482921a104541 426 PRINTS PR00735 Glycosyl hydrolase family 8 signature 406 420 1.2E-22 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_21655 94a8e37590f3618304c482921a104541 426 PRINTS PR00735 Glycosyl hydrolase family 8 signature 103 116 1.2E-22 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_21655 94a8e37590f3618304c482921a104541 426 PRINTS PR00735 Glycosyl hydrolase family 8 signature 168 186 1.2E-22 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_21655 94a8e37590f3618304c482921a104541 426 SUPERFAMILY SSF48208 37 425 5.83E-89 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 UP17_21655 94a8e37590f3618304c482921a104541 426 Pfam PF01270 Glycosyl hydrolases family 8 99 417 2.2E-30 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_21655 94a8e37590f3618304c482921a104541 426 Gene3D G3DSA:1.50.10.10 55 420 4.2E-131 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 UP17_21655 94a8e37590f3618304c482921a104541 426 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 168 186 - T 11-10-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 UP17_18545 03df703086b555f96481f4baf74c7be7 281 SMART SM00849 50 257 5.8E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_18545 03df703086b555f96481f4baf74c7be7 281 SUPERFAMILY SSF56281 3 261 8.51E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_18545 03df703086b555f96481f4baf74c7be7 281 Pfam PF00753 Metallo-beta-lactamase superfamily 54 234 6.4E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_18545 03df703086b555f96481f4baf74c7be7 281 Gene3D G3DSA:3.60.15.10 4 269 1.3E-86 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_20300 bda9056ba2a6c65bf561cab96b12b692 192 Gene3D G3DSA:3.40.1050.10 1 182 8.4E-47 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 UP17_20300 bda9056ba2a6c65bf561cab96b12b692 192 Pfam PF00484 Carbonic anhydrase 34 178 5.3E-20 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UP17_20300 bda9056ba2a6c65bf561cab96b12b692 192 SUPERFAMILY SSF53056 1 181 6.28E-44 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 UP17_20300 bda9056ba2a6c65bf561cab96b12b692 192 SMART SM00947 26 182 7.2E-41 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UP17_03340 bc9174716a6da01024fc847e2c269776 570 ProSitePatterns PS00145 Urease active site. 320 336 - T 11-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 Pfam PF01979 Amidohydrolase family 128 456 4.5E-76 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_03340 bc9174716a6da01024fc847e2c269776 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 298 315 2.1E-33 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 404 419 2.1E-33 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 430 443 2.1E-33 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 337 353 2.1E-33 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 ProSitePatterns PS01120 Urease nickel ligands signature. 130 143 - T 11-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 Gene3D G3DSA:3.20.20.140 132 570 3.4E-290 T 11-10-2018 UP17_03340 bc9174716a6da01024fc847e2c269776 570 Hamap MF_01953 Urease subunit alpha [ureC]. 3 570 57.55 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 570 0.0 T 11-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 122 6.0E-55 T 11-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03340 bc9174716a6da01024fc847e2c269776 570 SUPERFAMILY SSF51556 132 570 2.95E-197 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_03340 bc9174716a6da01024fc847e2c269776 570 SUPERFAMILY SSF51338 4 477 4.32E-60 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_03340 bc9174716a6da01024fc847e2c269776 570 Gene3D G3DSA:2.30.40.10 5 483 3.4E-290 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 Gene3D G3DSA:3.40.50.300 288 515 4.0E-44 T 11-10-2018 UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 Gene3D G3DSA:3.40.50.300 4 285 1.0E-62 T 11-10-2018 UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 SMART SM00382 349 514 7.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 SMART SM00382 28 236 7.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 Pfam PF12848 ABC transporter 230 315 5.1E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 SUPERFAMILY SSF52540 315 510 6.09E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 Pfam PF00005 ABC transporter 20 191 1.0E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 Pfam PF00005 ABC transporter 342 468 5.7E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_24625 e076091d0357739ee58b299cbb5dc41b 516 SUPERFAMILY SSF52540 4 233 3.97E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 Gene3D G3DSA:3.40.50.12740 2 199 2.5E-57 T 11-10-2018 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 SUPERFAMILY SSF52172 2 131 1.17E-28 T 11-10-2018 IPR011006 CheY-like superfamily UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 192 5.1E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 Pfam PF00072 Response regulator receiver domain 4 115 6.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 SMART SM00421 137 194 1.7E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.0E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 SUPERFAMILY SSF46894 123 199 7.48E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_23340 7c6d33ff69aed21188966fdfbc6286ce 202 SMART SM00448 2 115 1.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_09760 390ec14135cbf69c771c217660a399c7 235 SUPERFAMILY SSF64288 60 233 9.42E-39 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_09760 390ec14135cbf69c771c217660a399c7 235 Gene3D G3DSA:3.40.1410.10 76 235 1.6E-32 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_09760 390ec14135cbf69c771c217660a399c7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 5.7E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09760 390ec14135cbf69c771c217660a399c7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09760 390ec14135cbf69c771c217660a399c7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09760 390ec14135cbf69c771c217660a399c7 235 SUPERFAMILY SSF46785 4 76 1.64E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09760 390ec14135cbf69c771c217660a399c7 235 Pfam PF07702 UTRA domain 93 225 1.5E-28 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_09760 390ec14135cbf69c771c217660a399c7 235 Gene3D G3DSA:1.10.10.10 9 75 7.0E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09760 390ec14135cbf69c771c217660a399c7 235 SMART SM00345 15 72 1.3E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09760 390ec14135cbf69c771c217660a399c7 235 SMART SM00866 88 226 3.1E-25 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Gene3D G3DSA:2.40.30.10 203 303 1.6E-32 T 11-10-2018 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Gene3D G3DSA:3.30.70.870 310 594 7.6E-129 T 11-10-2018 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Gene3D G3DSA:2.40.50.250 487 603 7.6E-129 T 11-10-2018 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Pfam PF14492 Elongation Factor G, domain II 332 381 4.3E-7 T 11-10-2018 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 SUPERFAMILY SSF52540 3 211 4.21E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Pfam PF03144 Elongation factor Tu domain 2 223 293 2.2E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 156 2.1E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Pfam PF00009 Elongation factor Tu GTP binding domain 5 199 1.7E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Gene3D G3DSA:3.40.50.300 4 202 9.6E-66 T 11-10-2018 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Pfam PF00679 Elongation factor G C-terminus 401 481 2.2E-24 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 SMART SM00838 399 487 4.5E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 SUPERFAMILY SSF54980 402 517 6.71E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 SUPERFAMILY SSF50447 154 303 1.15E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 603 1.2E-287 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 Gene3D G3DSA:3.30.70.240 393 486 7.6E-129 T 11-10-2018 UP17_07060 3ef5541b2318e138bef864f660c7e4ba 615 SUPERFAMILY SSF54980 306 391 5.04E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_08215 f6825c33803f154591628c79e69254f0 514 SMART SM00729 214 432 1.1E-67 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_08215 f6825c33803f154591628c79e69254f0 514 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 70 505 1.0E-207 T 11-10-2018 UP17_08215 f6825c33803f154591628c79e69254f0 514 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 70 502 6.6E-161 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 UP17_08215 f6825c33803f154591628c79e69254f0 514 Pfam PF01938 TRAM domain 444 505 2.0E-15 T 11-10-2018 IPR002792 TRAM domain UP17_08215 f6825c33803f154591628c79e69254f0 514 SUPERFAMILY SSF102114 201 436 1.96E-66 T 11-10-2018 UP17_08215 f6825c33803f154591628c79e69254f0 514 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 218 238 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 UP17_08215 f6825c33803f154591628c79e69254f0 514 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 69 506 72.556 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 UP17_08215 f6825c33803f154591628c79e69254f0 514 Pfam PF00919 Uncharacterized protein family UPF0004 70 171 1.1E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 UP17_08215 f6825c33803f154591628c79e69254f0 514 Pfam PF04055 Radical SAM superfamily 218 389 5.6E-36 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_08215 f6825c33803f154591628c79e69254f0 514 Gene3D G3DSA:3.80.30.20 212 445 1.9E-90 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe UP17_08215 f6825c33803f154591628c79e69254f0 514 Gene3D G3DSA:3.40.50.12160 69 204 8.9E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily UP17_06535 c9476cfffb86854eef5db8b4bbb5d240 140 Gene3D G3DSA:2.30.110.10 3 138 3.0E-39 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 UP17_06535 c9476cfffb86854eef5db8b4bbb5d240 140 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 126 1.1E-17 T 11-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain UP17_06535 c9476cfffb86854eef5db8b4bbb5d240 140 SUPERFAMILY SSF50475 4 134 1.2E-27 T 11-10-2018 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 SMART SM00387 339 449 2.4E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 Gene3D G3DSA:1.10.287.130 179 296 1.1E-24 T 11-10-2018 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 SUPERFAMILY SSF55874 300 445 1.44E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 Gene3D G3DSA:3.30.565.10 301 449 1.1E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 293 6.8E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 SMART SM00304 175 229 3.0E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 SMART SM00388 230 297 5.3E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 SUPERFAMILY SSF47384 214 292 1.57E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_23325 674af03fe5a2b7f47745ab8a7ead59fd 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 447 1.5E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_24275 f2dd59964dbf8cb78d4a8497829a2cd4 427 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 42.057 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_24275 f2dd59964dbf8cb78d4a8497829a2cd4 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 405 3.2E-93 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 UP17_24275 f2dd59964dbf8cb78d4a8497829a2cd4 427 Gene3D G3DSA:3.65.10.10 21 229 4.1E-158 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 UP17_24275 f2dd59964dbf8cb78d4a8497829a2cd4 427 Gene3D G3DSA:3.65.10.10 6 412 4.1E-158 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 UP17_24275 f2dd59964dbf8cb78d4a8497829a2cd4 427 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 6.3E-170 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_24275 f2dd59964dbf8cb78d4a8497829a2cd4 427 SUPERFAMILY SSF55205 1 415 5.56E-133 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 PIRSF PIRSF005814 518 634 0.57 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 PIRSF PIRSF005814 1 565 3.1E-204 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 SUPERFAMILY SSF52540 289 509 6.07E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 Pfam PF00488 MutS domain V 326 507 4.3E-33 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 Gene3D G3DSA:3.40.50.300 288 580 3.0E-71 T 11-10-2018 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 SMART SM00534 323 508 2.1E-56 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 SMART SM00533 9 311 2.1E-20 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 SUPERFAMILY SSF48334 20 285 5.49E-26 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 Gene3D G3DSA:1.10.1420.10 113 222 2.7E-9 T 11-10-2018 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_20525 ca7073d87ab0bd1c8ae7d606b9f9f120 634 Gene3D G3DSA:1.10.1420.10 20 277 2.7E-9 T 11-10-2018 UP17_00320 684357b157659635c728ffe30b648792 1178 Pfam PF00271 Helicase conserved C-terminal domain 829 929 5.6E-15 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_00320 684357b157659635c728ffe30b648792 1178 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1114 28.434 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 UP17_00320 684357b157659635c728ffe30b648792 1178 Pfam PF00270 DEAD/DEAH box helicase 627 784 6.3E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_00320 684357b157659635c728ffe30b648792 1178 Gene3D G3DSA:3.40.50.300 498 1008 1.8E-244 T 11-10-2018 UP17_00320 684357b157659635c728ffe30b648792 1178 SUPERFAMILY SSF52540 377 490 1.12E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00320 684357b157659635c728ffe30b648792 1178 SMART SM00982 1024 1124 2.5E-39 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 UP17_00320 684357b157659635c728ffe30b648792 1178 SUPERFAMILY SSF52540 543 803 2.95E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00320 684357b157659635c728ffe30b648792 1178 SMART SM00487 620 810 1.6E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_00320 684357b157659635c728ffe30b648792 1178 Gene3D G3DSA:2.30.30.840 503 561 1.8E-244 T 11-10-2018 UP17_00320 684357b157659635c728ffe30b648792 1178 Gene3D G3DSA:3.40.50.300 562 801 1.8E-244 T 11-10-2018 UP17_00320 684357b157659635c728ffe30b648792 1178 SUPERFAMILY SSF52540 15 368 9.08E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00320 684357b157659635c728ffe30b648792 1178 SUPERFAMILY SSF52540 802 1008 1.6E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00320 684357b157659635c728ffe30b648792 1178 SUPERFAMILY SSF141259 490 568 6.41E-27 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily UP17_00320 684357b157659635c728ffe30b648792 1178 Pfam PF03461 TRCF domain 1026 1117 5.8E-28 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 UP17_00320 684357b157659635c728ffe30b648792 1178 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 159 1098 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 UP17_00320 684357b157659635c728ffe30b648792 1178 SMART SM00490 843 930 3.5E-18 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_00320 684357b157659635c728ffe30b648792 1178 Pfam PF02559 CarD-like/TRCF domain 500 595 7.5E-32 T 11-10-2018 IPR003711 CarD-like/TRCF domain UP17_00320 684357b157659635c728ffe30b648792 1178 Gene3D G3DSA:3.30.2060.10 140 225 2.3E-63 T 11-10-2018 UP17_00320 684357b157659635c728ffe30b648792 1178 SMART SM01058 499 596 1.8E-50 T 11-10-2018 IPR003711 CarD-like/TRCF domain UP17_00320 684357b157659635c728ffe30b648792 1178 SUPERFAMILY SSF143517 1010 1168 3.53E-38 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain UP17_00320 684357b157659635c728ffe30b648792 1178 Gene3D G3DSA:3.40.50.11180 35 325 2.3E-63 T 11-10-2018 UP17_00320 684357b157659635c728ffe30b648792 1178 Gene3D G3DSA:3.90.1150.50 1020 1178 4.5E-45 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 3.1E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Gene3D G3DSA:3.30.54.20 133 189 8.8E-67 T 11-10-2018 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Pfam PF03129 Anticodon binding domain 549 639 3.8E-26 T 11-10-2018 IPR004154 Anticodon-binding UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 640 7.3E-241 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 SUPERFAMILY SSF81271 6 64 8.72E-16 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 SUPERFAMILY SSF55681 245 534 7.57E-95 T 11-10-2018 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Gene3D G3DSA:3.40.50.800 541 643 5.9E-36 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Pfam PF02824 TGS domain 6 64 1.2E-12 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 643 35.15 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Gene3D G3DSA:3.30.930.10 227 540 3.6E-117 T 11-10-2018 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Gene3D G3DSA:3.30.980.10 72 224 8.8E-67 T 11-10-2018 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 SUPERFAMILY SSF52954 535 641 8.16E-33 T 11-10-2018 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Gene3D G3DSA:3.10.20.30 2 65 7.4E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 537 1.6E-32 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 SUPERFAMILY SSF55186 68 243 3.79E-66 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 UP17_18070 41c5e3c4c212aa73f91c7336bdd74c2f 643 SMART SM00863 172 221 8.3E-26 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_01600 b157c2659110439e2f13711f89627a1a 514 PIRSF PIRSF000538 2 504 5.0E-134 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_01600 b157c2659110439e2f13711f89627a1a 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_01600 b157c2659110439e2f13711f89627a1a 514 SUPERFAMILY SSF53067 249 498 5.55E-65 T 11-10-2018 UP17_01600 b157c2659110439e2f13711f89627a1a 514 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 4 507 3.9E-281 T 11-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 UP17_01600 b157c2659110439e2f13711f89627a1a 514 Gene3D G3DSA:3.30.420.40 248 512 4.5E-87 T 11-10-2018 UP17_01600 b157c2659110439e2f13711f89627a1a 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 451 8.4E-35 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 UP17_01600 b157c2659110439e2f13711f89627a1a 514 Gene3D G3DSA:3.30.420.40 1 247 3.0E-76 T 11-10-2018 UP17_01600 b157c2659110439e2f13711f89627a1a 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 3.9E-78 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 UP17_01600 b157c2659110439e2f13711f89627a1a 514 SUPERFAMILY SSF53067 4 248 1.24E-62 T 11-10-2018 UP17_06940 d2bcb1c9e074470d9d8a54cbfbea1ff2 261 Gene3D G3DSA:3.40.50.1000 8 251 3.6E-82 T 11-10-2018 IPR023214 HAD superfamily UP17_06940 d2bcb1c9e074470d9d8a54cbfbea1ff2 261 SUPERFAMILY SSF56784 8 259 1.06E-68 T 11-10-2018 IPR036412 HAD-like superfamily UP17_06940 d2bcb1c9e074470d9d8a54cbfbea1ff2 261 ProSitePatterns PS01229 Hypothetical cof family signature 2. 209 231 - T 11-10-2018 UP17_06940 d2bcb1c9e074470d9d8a54cbfbea1ff2 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 252 5.7E-60 T 11-10-2018 UP17_06940 d2bcb1c9e074470d9d8a54cbfbea1ff2 261 Gene3D G3DSA:3.30.1240.10 85 184 3.6E-82 T 11-10-2018 UP17_06940 d2bcb1c9e074470d9d8a54cbfbea1ff2 261 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 252 8.8E-62 T 11-10-2018 IPR000150 Cof family GO:0016787 UP17_06940 d2bcb1c9e074470d9d8a54cbfbea1ff2 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 228 3.3E-24 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 SUPERFAMILY SSF54862 333 407 6.05E-13 T 11-10-2018 UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 SUPERFAMILY SSF51395 1 318 5.33E-69 T 11-10-2018 UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 317 6.0E-56 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 Pfam PF01180 Dihydroorotate dehydrogenase 86 302 1.9E-29 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 Gene3D G3DSA:3.30.70.20 304 412 1.9E-22 T 11-10-2018 UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 Pfam PF14697 4Fe-4S dicluster domain 335 397 4.2E-23 T 11-10-2018 UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_01070 408e03ea8c610eaa86f56f8e0a247777 428 Gene3D G3DSA:3.20.20.70 4 303 1.0E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_00750 0fac32c73d5375061528aec598a2ce7d 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.8E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00750 0fac32c73d5375061528aec598a2ce7d 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00750 0fac32c73d5375061528aec598a2ce7d 179 PIRSF PIRSF002161 1 179 1.8E-70 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00750 0fac32c73d5375061528aec598a2ce7d 179 Pfam PF00281 Ribosomal protein L5 24 80 9.1E-29 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00750 0fac32c73d5375061528aec598a2ce7d 179 Gene3D G3DSA:3.30.1440.10 1 179 1.1E-83 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00750 0fac32c73d5375061528aec598a2ce7d 179 SUPERFAMILY SSF55282 3 178 1.7E-78 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00750 0fac32c73d5375061528aec598a2ce7d 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.452 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_10700 5a51011bc27806da2aff135c806e649c 455 Gene3D G3DSA:3.30.1360.60 3 81 7.4E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_10700 5a51011bc27806da2aff135c806e649c 455 Pfam PF00367 phosphotransferase system, EIIB 13 45 1.5E-8 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_10700 5a51011bc27806da2aff135c806e649c 455 Pfam PF02378 Phosphotransferase system, EIIC 120 389 2.7E-37 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_10700 5a51011bc27806da2aff135c806e649c 455 SUPERFAMILY SSF55604 10 84 1.44E-14 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_17390 5f01095ca5d6d73ecb588f01e5e0b277 791 SUPERFAMILY SSF64182 57 452 6.15E-123 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily UP17_17390 5f01095ca5d6d73ecb588f01e5e0b277 791 Gene3D G3DSA:3.10.310.30 319 444 2.3E-34 T 11-10-2018 UP17_17390 5f01095ca5d6d73ecb588f01e5e0b277 791 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 563 1.1E-178 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 UP17_17390 5f01095ca5d6d73ecb588f01e5e0b277 791 Pfam PF02272 DHHA1 domain 309 437 7.7E-20 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 UP17_17390 5f01095ca5d6d73ecb588f01e5e0b277 791 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 569 772 5.9E-63 T 11-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal UP17_17390 5f01095ca5d6d73ecb588f01e5e0b277 791 Pfam PF01368 DHH family 82 225 5.1E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_17390 5f01095ca5d6d73ecb588f01e5e0b277 791 Gene3D G3DSA:3.90.1640.30 57 318 5.2E-94 T 11-10-2018 UP17_21135 6686ecbef17f250ff3b4185a247859f6 88 SUPERFAMILY SSF47336 6 83 6.94E-12 T 11-10-2018 IPR036736 ACP-like superfamily UP17_21135 6686ecbef17f250ff3b4185a247859f6 88 Gene3D G3DSA:1.10.1200.10 1 86 2.0E-14 T 11-10-2018 IPR036736 ACP-like superfamily UP17_21135 6686ecbef17f250ff3b4185a247859f6 88 Pfam PF00550 Phosphopantetheine attachment site 21 73 4.1E-7 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 Gene3D G3DSA:1.20.1250.20 251 449 6.6E-18 T 11-10-2018 UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 3.4E-9 T 11-10-2018 UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 3.4E-9 T 11-10-2018 UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 3.4E-9 T 11-10-2018 UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 3.4E-9 T 11-10-2018 UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 Pfam PF07690 Major Facilitator Superfamily 14 404 3.6E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 Gene3D G3DSA:1.20.1720.10 9 250 2.0E-32 T 11-10-2018 UP17_19350 ac0430884c5170db7628548e7c73f7a1 463 SUPERFAMILY SSF103473 8 449 8.63E-55 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_18410 1a14730e5c84b6491eddb552f8e007cb 267 SUPERFAMILY SSF89550 1 256 5.76E-38 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 UP17_18410 1a14730e5c84b6491eddb552f8e007cb 267 Pfam PF02811 PHP domain 4 160 8.3E-12 T 11-10-2018 IPR004013 PHP domain GO:0003824 UP17_18410 1a14730e5c84b6491eddb552f8e007cb 267 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 259 3.4E-67 T 11-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 UP17_18410 1a14730e5c84b6491eddb552f8e007cb 267 Gene3D G3DSA:3.20.20.140 1 265 9.8E-67 T 11-10-2018 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 133 434 1.7E-32 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 SUPERFAMILY SSF51971 131 378 7.65E-63 T 11-10-2018 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 13 121 5.4E-39 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 PRINTS PR00419 Adrenodoxin reductase family signature 157 170 4.6E-17 T 11-10-2018 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 PRINTS PR00419 Adrenodoxin reductase family signature 267 281 4.6E-17 T 11-10-2018 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 PRINTS PR00419 Adrenodoxin reductase family signature 134 156 4.6E-17 T 11-10-2018 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 PRINTS PR00419 Adrenodoxin reductase family signature 199 209 4.6E-17 T 11-10-2018 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 Gene3D G3DSA:1.10.1060.10 5 131 8.7E-42 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 Gene3D G3DSA:3.50.50.60 132 259 6.1E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 Gene3D G3DSA:3.50.50.60 262 453 3.3E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_01065 8a6026dc6901acf87b3ada89fc308c51 454 SUPERFAMILY SSF46548 13 143 1.05E-30 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_24580 1eb960edf3ca7db297c150b077a1110e 490 SUPERFAMILY SSF52540 1 236 3.66E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24580 1eb960edf3ca7db297c150b077a1110e 490 SMART SM00382 26 215 1.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_24580 1eb960edf3ca7db297c150b077a1110e 490 Gene3D G3DSA:3.40.50.300 1 256 9.1E-71 T 11-10-2018 UP17_24580 1eb960edf3ca7db297c150b077a1110e 490 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_24580 1eb960edf3ca7db297c150b077a1110e 490 Pfam PF01955 Adenosylcobinamide amidohydrolase 288 475 5.4E-52 T 11-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ UP17_24580 1eb960edf3ca7db297c150b077a1110e 490 Pfam PF00005 ABC transporter 17 167 9.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13995 e858cf86f0a3b8d2875440125e23e981 256 SUPERFAMILY SSF53213 1 256 3.66E-77 T 11-10-2018 UP17_13995 e858cf86f0a3b8d2875440125e23e981 256 Gene3D G3DSA:3.40.830.10 1 256 3.8E-75 T 11-10-2018 UP17_13995 e858cf86f0a3b8d2875440125e23e981 256 PIRSF PIRSF006157 1 256 3.8E-83 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 UP17_13995 e858cf86f0a3b8d2875440125e23e981 256 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 249 1.2E-36 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 103 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 Pfam PF01047 MarR family 55 93 1.7E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 SUPERFAMILY SSF46785 10 142 3.12E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 SMART SM00347 31 130 3.7E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 Gene3D G3DSA:1.10.10.10 17 154 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 2.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 2.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10115 eb619e5692b02ef479a7b70815e9f94a 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 2.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 1.6E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 5.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 5.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 SMART SM00866 94 230 2.9E-11 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 SUPERFAMILY SSF46785 6 82 8.32E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 Gene3D G3DSA:3.40.1410.10 76 234 2.6E-23 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 Pfam PF07702 UTRA domain 120 227 2.4E-20 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 Gene3D G3DSA:1.10.10.10 2 74 1.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 SMART SM00345 14 73 2.6E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_10875 94d0a2eac57963a5efa29ab98457f129 240 SUPERFAMILY SSF64288 61 236 2.67E-29 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_15025 c7733b23634aaabdec01f4d2d2e94855 133 SUPERFAMILY SSF53098 2 126 5.06E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_15025 c7733b23634aaabdec01f4d2d2e94855 133 Gene3D G3DSA:3.30.420.10 2 129 6.3E-28 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_15025 c7733b23634aaabdec01f4d2d2e94855 133 Pfam PF13456 Reverse transcriptase-like 7 123 1.9E-16 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 195 208 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 SUPERFAMILY SSF52540 171 416 8.95E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 258 273 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 Gene3D G3DSA:3.40.50.300 163 342 4.1E-62 T 11-10-2018 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 SMART SM00382 191 335 3.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 385 394 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 Gene3D G3DSA:1.10.10.60 424 481 1.1E-9 T 11-10-2018 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 Pfam PF00158 Sigma-54 interaction domain 171 338 1.9E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 Pfam PF02954 Bacterial regulatory protein, Fis family 451 478 2.1E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 SUPERFAMILY SSF46689 385 480 1.61E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_04350 ba5c0234fcfefd972fd497accce35d2e 481 Gene3D G3DSA:1.10.8.60 343 421 4.4E-20 T 11-10-2018 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 SUPERFAMILY SSF103190 33 163 4.71E-37 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 SUPERFAMILY SSF55890 317 401 1.44E-8 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 Pfam PF17203 Single cache domain 3 31 165 1.2E-26 T 11-10-2018 IPR033463 Single cache domain 3 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 SMART SM00091 207 274 4.2E-6 T 11-10-2018 IPR000014 PAS domain UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 SMART SM00387 414 526 5.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 SUPERFAMILY SSF55785 207 305 7.42E-10 T 11-10-2018 IPR035965 PAS domain superfamily UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 3.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 3.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 523 3.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 3.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 Gene3D G3DSA:3.30.450.20 26 158 2.7E-44 T 11-10-2018 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 524 6.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 Gene3D G3DSA:3.30.450.20 193 308 1.9E-23 T 11-10-2018 UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 Gene3D G3DSA:3.30.565.10 370 525 2.4E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 SUPERFAMILY SSF55874 391 523 6.29E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23360 981baf1bd1dcbf20f47c8f9ba4dfbef4 530 Pfam PF00989 PAS fold 208 301 2.9E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 SUPERFAMILY SSF55874 299 464 2.88E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 SUPERFAMILY SSF47384 225 309 1.63E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 463 9.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 Pfam PF00672 HAMP domain 191 237 2.1E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 SMART SM00387 354 466 1.1E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 Gene3D G3DSA:3.30.565.10 314 467 7.8E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 Gene3D G3DSA:1.10.8.500 189 236 9.5E-12 T 11-10-2018 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 Gene3D G3DSA:1.10.287.130 237 312 2.3E-22 T 11-10-2018 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 SUPERFAMILY SSF158472 191 236 1.14E-10 T 11-10-2018 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 SMART SM00388 242 309 1.0E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 SMART SM00304 189 241 1.3E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_14115 ef6b8539f8ec31a7a3d24c3ed0ffa026 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 308 3.3E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_19100 ecf329497383c7264b3d502db3f5fbd8 80 Gene3D G3DSA:2.40.50.100 2 73 2.8E-6 T 11-10-2018 UP17_19100 ecf329497383c7264b3d502db3f5fbd8 80 SUPERFAMILY SSF51230 8 72 8.14E-6 T 11-10-2018 IPR011053 Single hybrid motif UP17_18575 eaf1ba47b97bcc4369e4cb2ef493f8d4 189 Gene3D G3DSA:3.90.1140.10 8 189 2.0E-40 T 11-10-2018 UP17_18575 eaf1ba47b97bcc4369e4cb2ef493f8d4 189 SUPERFAMILY SSF55144 8 187 4.01E-37 T 11-10-2018 IPR009097 Cyclic phosphodiesterase UP17_18575 eaf1ba47b97bcc4369e4cb2ef493f8d4 189 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 8 187 1.0E-42 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 UP17_18575 eaf1ba47b97bcc4369e4cb2ef493f8d4 189 Pfam PF13563 2'-5' RNA ligase superfamily 28 172 2.7E-16 T 11-10-2018 UP17_18575 eaf1ba47b97bcc4369e4cb2ef493f8d4 189 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 7 187 22.341 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 UP17_10715 9479e4f9ab9754ffdf6eb3b8a0524668 412 Pfam PF07075 Protein of unknown function (DUF1343) 54 411 4.2E-150 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 UP17_10715 9479e4f9ab9754ffdf6eb3b8a0524668 412 Gene3D G3DSA:3.90.1150.140 249 396 4.2E-157 T 11-10-2018 UP17_10715 9479e4f9ab9754ffdf6eb3b8a0524668 412 Gene3D G3DSA:3.40.50.12170 37 411 4.2E-157 T 11-10-2018 UP17_10715 9479e4f9ab9754ffdf6eb3b8a0524668 412 PIRSF PIRSF016719 1 412 4.0E-180 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 UP17_01660 6db011f4818f606d8dddc7fef16227ad 150 SUPERFAMILY SSF48452 20 134 6.2E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_01660 6db011f4818f606d8dddc7fef16227ad 150 Gene3D G3DSA:1.25.40.10 11 150 2.9E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 SMART SM01228 545 616 4.8E-42 T 11-10-2018 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 Gene3D G3DSA:3.50.50.60 1 226 1.7E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 Gene3D G3DSA:3.50.50.60 296 458 6.4E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 Gene3D G3DSA:1.10.150.570 568 620 1.0E-23 T 11-10-2018 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 7.5E-6 T 11-10-2018 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 7.5E-6 T 11-10-2018 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 1.7E-295 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 Gene3D G3DSA:1.10.10.1800 459 549 2.1E-26 T 11-10-2018 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 Pfam PF13932 GidA associated domain 401 615 1.8E-78 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.432 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 SUPERFAMILY SSF51905 7 261 2.92E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 Pfam PF01134 Glucose inhibited division protein A 9 398 1.3E-172 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 UP17_25020 22ee9245d3da78223dcb1b6e200505d2 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 UP17_21105 68bc30229f58ff7e713cdd0926619f0f 65 Pfam PF08858 IDEAL domain 25 61 5.4E-14 T 11-10-2018 IPR014957 IDEAL domain UP17_21105 68bc30229f58ff7e713cdd0926619f0f 65 SMART SM00914 25 61 2.1E-9 T 11-10-2018 IPR014957 IDEAL domain UP17_21105 68bc30229f58ff7e713cdd0926619f0f 65 Gene3D G3DSA:4.10.810.10 11 65 6.1E-21 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 UP17_22155 c03ee9a54e9d2074a5e4adcfc206ddb7 354 Gene3D G3DSA:3.40.190.170 46 348 2.2E-87 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily UP17_22155 c03ee9a54e9d2074a5e4adcfc206ddb7 354 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 51 305 3.1E-81 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 UP17_22155 c03ee9a54e9d2074a5e4adcfc206ddb7 354 PIRSF PIRSF006470 24 350 1.7E-108 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 UP17_22155 c03ee9a54e9d2074a5e4adcfc206ddb7 354 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 51 333 3.6E-85 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 UP17_11305 d1ba781966a90b87a6d50255f7f382d4 387 SUPERFAMILY SSF53901 25 374 8.42E-23 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_11305 d1ba781966a90b87a6d50255f7f382d4 387 Gene3D G3DSA:3.40.47.10 1 387 3.9E-100 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_11305 d1ba781966a90b87a6d50255f7f382d4 387 PIRSF PIRSF000429 7 381 1.0E-23 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 TIGRFAM TIGR01481 ccpA: catabolite control protein A 3 334 5.4E-158 T 11-10-2018 IPR006377 Catabolite control protein A GO:0006355 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 SUPERFAMILY SSF53822 63 334 1.28E-81 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 SMART SM00354 3 73 1.1E-37 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.4E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.4E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 Gene3D G3DSA:3.40.50.2300 64 310 8.6E-87 T 11-10-2018 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 Gene3D G3DSA:3.40.50.2300 162 291 8.6E-87 T 11-10-2018 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 9.9E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 Pfam PF13377 Periplasmic binding protein-like domain 171 333 2.0E-33 T 11-10-2018 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 11-10-2018 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 SUPERFAMILY SSF47413 2 61 1.6E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_18460 f1be180ac1ba53786d32a07b58a5cf58 334 Gene3D G3DSA:1.10.260.40 2 61 1.5E-27 T 11-10-2018 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 Pfam PF02779 Transketolase, pyrimidine binding domain 315 477 5.7E-39 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 SMART SM00861 316 481 1.2E-61 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 621 2.9E-289 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 Gene3D G3DSA:3.40.50.970 313 490 5.1E-64 T 11-10-2018 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 SUPERFAMILY SSF52518 314 503 4.04E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 Pfam PF02780 Transketolase, C-terminal domain 493 613 3.8E-31 T 11-10-2018 IPR033248 Transketolase, C-terminal domain UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 SUPERFAMILY SSF52922 490 620 2.22E-32 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 SUPERFAMILY SSF52518 7 378 5.69E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 2.4E-114 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.609 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 Gene3D G3DSA:3.40.50.920 493 626 2.4E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_16070 42a7e59d99a1d9a90fd46c557fc7a328 630 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_14580 da2bfa36f6b84be70cd6ba0acfc6ff1c 446 Gene3D G3DSA:3.40.640.10 66 336 4.3E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_14580 da2bfa36f6b84be70cd6ba0acfc6ff1c 446 Pfam PF00202 Aminotransferase class-III 30 443 9.7E-110 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_14580 da2bfa36f6b84be70cd6ba0acfc6ff1c 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_14580 da2bfa36f6b84be70cd6ba0acfc6ff1c 446 SUPERFAMILY SSF53383 27 445 6.12E-124 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_14580 da2bfa36f6b84be70cd6ba0acfc6ff1c 446 Gene3D G3DSA:3.90.1150.10 14 443 4.3E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_14580 da2bfa36f6b84be70cd6ba0acfc6ff1c 446 PIRSF PIRSF000521 26 146 2.4E-10 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_14580 da2bfa36f6b84be70cd6ba0acfc6ff1c 446 PIRSF PIRSF000521 138 446 1.3E-26 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 4 924 2.3E-259 T 11-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 Gene3D G3DSA:3.30.420.10 1 173 1.8E-46 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 Gene3D G3DSA:3.40.50.300 721 924 4.4E-41 T 11-10-2018 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 Pfam PF00929 Exonuclease 6 161 6.0E-29 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 Pfam PF13307 Helicase C-terminal domain 745 907 1.9E-37 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 SMART SM00491 760 894 2.5E-37 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 SMART SM00487 253 523 0.0013 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 Pfam PF04851 Type III restriction enzyme, res subunit 255 485 1.2E-6 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 1 926 27.328 T 11-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 SMART SM00479 4 171 1.2E-43 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 Gene3D G3DSA:3.40.50.300 255 508 3.9E-39 T 11-10-2018 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 173 5.0E-24 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 SUPERFAMILY SSF53098 4 212 6.0E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_15250 1734079bfd196d328f0be2dd1c390c69 926 SUPERFAMILY SSF52540 270 887 3.75E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20335 6890d474664c2788809a0382d6c38326 1055 Pfam PF00667 FAD binding domain 663 873 6.2E-38 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1001 1009 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 699 709 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 978 994 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 947 958 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 868 877 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 905 924 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 934 943 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 833 840 7.2E-31 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 SUPERFAMILY SSF63380 655 889 1.51E-61 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel UP17_20335 6890d474664c2788809a0382d6c38326 1055 Pfam PF00175 Oxidoreductase NAD-binding domain 906 1016 3.2E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 Gene3D G3DSA:1.10.630.10 4 472 5.9E-166 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 Gene3D G3DSA:3.40.50.360 484 635 6.6E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_20335 6890d474664c2788809a0382d6c38326 1055 SUPERFAMILY SSF52218 483 638 1.57E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_20335 6890d474664c2788809a0382d6c38326 1055 PIRSF PIRSF000209 1 1055 0.0 T 11-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 UP17_20335 6890d474664c2788809a0382d6c38326 1055 SUPERFAMILY SSF48264 6 455 3.67E-108 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 SUPERFAMILY SSF52343 893 1052 4.58E-48 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_20335 6890d474664c2788809a0382d6c38326 1055 Gene3D G3DSA:1.20.990.10 709 831 4.0E-68 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00369 Flavodoxin signature 488 501 2.1E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00369 Flavodoxin signature 566 576 2.1E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00369 Flavodoxin signature 591 610 2.1E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 PRINTS PR00369 Flavodoxin signature 534 545 2.1E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 Gene3D G3DSA:3.40.50.80 894 1054 4.3E-57 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_20335 6890d474664c2788809a0382d6c38326 1055 Pfam PF00258 Flavodoxin 489 621 3.6E-26 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 UP17_20335 6890d474664c2788809a0382d6c38326 1055 Pfam PF00067 Cytochrome P450 16 446 3.5E-80 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_20335 6890d474664c2788809a0382d6c38326 1055 Gene3D G3DSA:2.40.30.10 674 883 4.0E-68 T 11-10-2018 UP17_12795 f5688b60f4e4d75c3707d1022fd06520 476 Pfam PF07995 Glucose / Sorbosone dehydrogenase 78 279 1.9E-9 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase UP17_12795 f5688b60f4e4d75c3707d1022fd06520 476 Gene3D G3DSA:2.120.10.30 2 417 5.5E-25 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like UP17_12795 f5688b60f4e4d75c3707d1022fd06520 476 SUPERFAMILY SSF50952 46 275 9.15E-11 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 UP17_05160 97b57465af2fb53fdbb718795102fbec 443 SUPERFAMILY SSF54631 204 341 2.78E-29 T 11-10-2018 UP17_05160 97b57465af2fb53fdbb718795102fbec 443 Gene3D G3DSA:3.10.580.10 197 349 5.4E-49 T 11-10-2018 UP17_05160 97b57465af2fb53fdbb718795102fbec 443 Gene3D G3DSA:3.30.465.10 350 429 5.8E-16 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 UP17_05160 97b57465af2fb53fdbb718795102fbec 443 SMART SM01091 354 431 2.3E-20 T 11-10-2018 IPR005170 Transporter-associated domain UP17_05160 97b57465af2fb53fdbb718795102fbec 443 Pfam PF03471 Transporter associated domain 355 429 5.7E-16 T 11-10-2018 IPR005170 Transporter-associated domain UP17_05160 97b57465af2fb53fdbb718795102fbec 443 Pfam PF00571 CBS domain 217 271 2.3E-5 T 11-10-2018 IPR000644 CBS domain UP17_05160 97b57465af2fb53fdbb718795102fbec 443 Pfam PF00571 CBS domain 288 338 1.5E-5 T 11-10-2018 IPR000644 CBS domain UP17_05160 97b57465af2fb53fdbb718795102fbec 443 SUPERFAMILY SSF56176 353 429 4.09E-17 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_05160 97b57465af2fb53fdbb718795102fbec 443 Pfam PF01595 Domain of unknown function DUF21 7 201 3.9E-46 T 11-10-2018 IPR002550 CNNM, transmembrane domain UP17_22465 ccaf6b46a80b7aaca139275c7a99ac55 391 SUPERFAMILY SSF103473 5 376 2.88E-55 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_22465 ccaf6b46a80b7aaca139275c7a99ac55 391 Pfam PF07690 Major Facilitator Superfamily 10 313 1.3E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_22465 ccaf6b46a80b7aaca139275c7a99ac55 391 Gene3D G3DSA:1.20.1250.20 3 380 5.9E-47 T 11-10-2018 UP17_02895 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.4E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_02895 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 3.4E-45 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_02895 1d2ab16b4a87defb61434e0d5bbb0a9a 442 SUPERFAMILY SSF56672 36 401 4.08E-55 T 11-10-2018 UP17_02895 1d2ab16b4a87defb61434e0d5bbb0a9a 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 1.6E-110 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_21080 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.4E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_21080 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 3.4E-45 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_21080 1d2ab16b4a87defb61434e0d5bbb0a9a 442 SUPERFAMILY SSF56672 36 401 4.08E-55 T 11-10-2018 UP17_21080 1d2ab16b4a87defb61434e0d5bbb0a9a 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 1.6E-110 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_21285 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.4E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_21285 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 3.4E-45 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_21285 1d2ab16b4a87defb61434e0d5bbb0a9a 442 SUPERFAMILY SSF56672 36 401 4.08E-55 T 11-10-2018 UP17_21285 1d2ab16b4a87defb61434e0d5bbb0a9a 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 1.6E-110 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_03290 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.4E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_03290 1d2ab16b4a87defb61434e0d5bbb0a9a 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 3.4E-45 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_03290 1d2ab16b4a87defb61434e0d5bbb0a9a 442 SUPERFAMILY SSF56672 36 401 4.08E-55 T 11-10-2018 UP17_03290 1d2ab16b4a87defb61434e0d5bbb0a9a 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 1.6E-110 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 377 393 1.3E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 479 495 1.3E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 398 409 1.3E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 341 361 1.3E-25 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 SUPERFAMILY SSF55486 232 554 2.75E-82 T 11-10-2018 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 Gene3D G3DSA:3.10.170.10 233 390 1.6E-47 T 11-10-2018 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 Gene3D G3DSA:3.10.450.40 147 226 9.2E-8 T 11-10-2018 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 235 385 2.2E-43 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 Pfam PF03413 Peptidase propeptide and YPEB domain 152 221 1.4E-9 T 11-10-2018 IPR025711 PepSY domain UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 88 136 1.4E-17 T 11-10-2018 IPR011096 FTP domain UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 Gene3D G3DSA:1.10.390.10 391 554 4.8E-46 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily UP17_08785 82280fc0b5a94890e1032eacec93db3a 555 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 389 554 3.0E-40 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 592 609 8.2E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 609 629 8.2E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 301 314 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 SMART SM00382 297 452 6.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Gene3D G3DSA:3.10.580.10 3 122 1.2E-13 T 11-10-2018 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Pfam PF02954 Bacterial regulatory protein, Fis family 587 625 1.6E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Pfam PF00989 PAS fold 138 206 3.9E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Gene3D G3DSA:3.30.450.20 141 236 9.3E-16 T 11-10-2018 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 SUPERFAMILY SSF46689 491 628 4.78E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Gene3D G3DSA:1.10.8.60 450 530 1.2E-20 T 11-10-2018 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 SUPERFAMILY SSF55785 138 231 3.84E-12 T 11-10-2018 IPR035965 PAS domain superfamily UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 364 379 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Pfam PF00158 Sigma-54 interaction domain 277 444 2.3E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 SUPERFAMILY SSF52540 277 522 3.41E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Gene3D G3DSA:1.10.10.60 565 629 1.6E-15 T 11-10-2018 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Pfam PF00571 CBS domain 73 110 0.0039 T 11-10-2018 IPR000644 CBS domain UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Pfam PF00571 CBS domain 8 62 0.0048 T 11-10-2018 IPR000644 CBS domain UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 SUPERFAMILY SSF54631 2 111 9.6E-16 T 11-10-2018 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 SMART SM00091 137 203 1.2E-4 T 11-10-2018 IPR000014 PAS domain UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 Gene3D G3DSA:3.40.50.300 263 449 1.6E-68 T 11-10-2018 UP17_12570 287da84e5a51aeff36c4f09ca67f0076 629 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 190 1.4E-6 T 11-10-2018 IPR000014 PAS domain UP17_14365 29637b62aa7d089f624c266a8548298c 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 UP17_14365 29637b62aa7d089f624c266a8548298c 161 PIRSF PIRSF000194 1 161 7.6E-66 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 UP17_14365 29637b62aa7d089f624c266a8548298c 161 Gene3D G3DSA:3.40.430.10 1 161 2.7E-63 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_14365 29637b62aa7d089f624c266a8548298c 161 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.5E-17 T 11-10-2018 UP17_14365 29637b62aa7d089f624c266a8548298c 161 PRINTS PR00070 Dihydrofolate reductase signature 27 35 2.5E-17 T 11-10-2018 UP17_14365 29637b62aa7d089f624c266a8548298c 161 PRINTS PR00070 Dihydrofolate reductase signature 40 51 2.5E-17 T 11-10-2018 UP17_14365 29637b62aa7d089f624c266a8548298c 161 PRINTS PR00070 Dihydrofolate reductase signature 13 23 2.5E-17 T 11-10-2018 UP17_14365 29637b62aa7d089f624c266a8548298c 161 SUPERFAMILY SSF53597 1 161 8.46E-60 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_14365 29637b62aa7d089f624c266a8548298c 161 Pfam PF00186 Dihydrofolate reductase 1 160 2.8E-66 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 SUPERFAMILY SSF55785 8 110 5.23E-11 T 11-10-2018 IPR035965 PAS domain superfamily UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 Gene3D G3DSA:1.10.8.60 319 385 4.0E-21 T 11-10-2018 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 SUPERFAMILY SSF52540 147 389 2.83E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 Gene3D G3DSA:1.10.10.60 408 463 2.1E-5 T 11-10-2018 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 Gene3D G3DSA:3.40.50.300 134 318 1.9E-69 T 11-10-2018 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 Pfam PF08448 PAS fold 18 117 1.4E-7 T 11-10-2018 IPR013656 PAS fold-4 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 SMART SM00382 167 311 3.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 SUPERFAMILY SSF46689 412 460 8.06E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 Gene3D G3DSA:3.30.450.20 6 133 1.5E-13 T 11-10-2018 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 Pfam PF00158 Sigma-54 interaction domain 147 314 2.4E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_04565 c71c888174d73dbaf07f47766b8a20c0 467 Pfam PF02954 Bacterial regulatory protein, Fis family 421 460 7.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 Pfam PF00117 Glutamine amidotransferase class-I 174 350 8.2E-48 T 11-10-2018 IPR017926 Glutamine amidotransferase UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 2.3E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 SUPERFAMILY SSF52317 139 353 3.12E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 SUPERFAMILY SSF52021 1 144 7.98E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 1.0E-11 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 1.0E-11 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 1.0E-11 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 Gene3D G3DSA:3.50.30.20 1 148 3.5E-57 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 8.1E-37 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 8.1E-37 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 8.1E-37 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 8.1E-37 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 8.1E-37 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 SMART SM01097 1 131 1.9E-89 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 356 49.584 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 353 4.8E-150 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 Gene3D G3DSA:3.40.50.880 164 364 1.3E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00097 Anthranilate synthase component II signature 327 340 1.8E-6 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00097 Anthranilate synthase component II signature 241 252 1.8E-6 T 11-10-2018 UP17_07440 4ed7bcb2fc47a05ad4a04520f966a0cc 368 PRINTS PR00097 Anthranilate synthase component II signature 214 223 1.8E-6 T 11-10-2018 UP17_11490 84f0618a7ee17f62ad4a4ea9f9395e68 217 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 154 6.6E-11 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_11490 84f0618a7ee17f62ad4a4ea9f9395e68 217 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 UP17_11490 84f0618a7ee17f62ad4a4ea9f9395e68 217 SUPERFAMILY SSF51161 23 210 1.52E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_11490 84f0618a7ee17f62ad4a4ea9f9395e68 217 Gene3D G3DSA:2.160.10.10 1 217 3.3E-82 T 11-10-2018 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 369 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 355 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 3.7E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 SUPERFAMILY SSF55874 248 414 4.32E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 SMART SM00388 192 259 1.7E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 258 7.9E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 SUPERFAMILY SSF47384 182 259 1.96E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 304 415 4.6E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 SMART SM00387 304 416 3.1E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 Gene3D G3DSA:3.30.565.10 263 420 8.0E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_12390 10245b29ea81aeb4fb72e4b4b78e6ea3 422 Gene3D G3DSA:1.10.287.130 179 261 7.2E-18 T 11-10-2018 UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 Pfam PF03466 LysR substrate binding domain 88 292 1.7E-40 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 Gene3D G3DSA:3.40.190.290 92 297 2.4E-41 T 11-10-2018 UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 8.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 SUPERFAMILY SSF53850 89 292 2.17E-34 T 11-10-2018 UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 Gene3D G3DSA:1.10.10.10 1 91 1.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11040 2132ab585173ee89a855fb3d4db0da47 302 SUPERFAMILY SSF46785 2 87 1.03E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_17950 059111e0a359a76ed16e6445b0851233 804 SUPERFAMILY SSF56037 209 403 2.38E-71 T 11-10-2018 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Gene3D G3DSA:3.30.56.10 411 483 6.2E-26 T 11-10-2018 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Pfam PF01588 Putative tRNA binding domain 46 152 1.6E-28 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Gene3D G3DSA:3.30.930.10 495 699 7.1E-64 T 11-10-2018 UP17_17950 059111e0a359a76ed16e6445b0851233 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 8.4E-278 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 SUPERFAMILY SSF54991 705 803 5.23E-32 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 SUPERFAMILY SSF46955 411 483 7.69E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_17950 059111e0a359a76ed16e6445b0851233 804 Gene3D G3DSA:3.50.40.10 204 404 8.5E-84 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 SMART SM00873 221 394 2.0E-91 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 SMART SM00896 710 803 2.3E-45 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 47.503 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 SUPERFAMILY SSF55681 475 697 5.96E-52 T 11-10-2018 UP17_17950 059111e0a359a76ed16e6445b0851233 804 SUPERFAMILY SSF50249 40 197 4.41E-46 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_17950 059111e0a359a76ed16e6445b0851233 804 Pfam PF03483 B3/4 domain 223 394 3.3E-67 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Gene3D G3DSA:2.40.50.140 40 161 4.6E-69 T 11-10-2018 UP17_17950 059111e0a359a76ed16e6445b0851233 804 SMART SM00874 411 479 2.8E-28 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 3.1E-30 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Gene3D G3DSA:3.30.70.380 711 803 6.5E-32 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Gene3D G3DSA:3.30.56.10 4 189 4.6E-69 T 11-10-2018 UP17_17950 059111e0a359a76ed16e6445b0851233 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 1.5E-18 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 UP17_21020 2a3a2f3b01fb9f8457670b92a1b6cb37 199 Pfam PF01471 Putative peptidoglycan binding domain 28 84 1.2E-11 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_21020 2a3a2f3b01fb9f8457670b92a1b6cb37 199 Pfam PF07486 Cell Wall Hydrolase 100 197 2.9E-23 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 UP17_21020 2a3a2f3b01fb9f8457670b92a1b6cb37 199 Gene3D G3DSA:2.40.10.420 164 199 3.7E-17 T 11-10-2018 UP17_21020 2a3a2f3b01fb9f8457670b92a1b6cb37 199 Gene3D G3DSA:1.10.101.10 15 89 3.2E-18 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_21020 2a3a2f3b01fb9f8457670b92a1b6cb37 199 SUPERFAMILY SSF47090 17 86 3.92E-15 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_21020 2a3a2f3b01fb9f8457670b92a1b6cb37 199 Gene3D G3DSA:1.10.10.2520 90 163 1.5E-27 T 11-10-2018 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 ProSitePatterns PS01176 Initiation factor 2 signature. 670 692 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Pfam PF11987 Translation-initiation factor 2 505 609 3.3E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Gene3D G3DSA:3.40.50.300 216 390 6.7E-76 T 11-10-2018 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 378 3.7E-39 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 SUPERFAMILY SSF50447 392 474 7.07E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 SUPERFAMILY SSF52156 497 626 4.45E-39 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Pfam PF00009 Elongation factor Tu GTP binding domain 224 379 1.9E-36 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 SUPERFAMILY SSF50447 620 717 8.73E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Gene3D G3DSA:2.40.30.10 391 508 4.8E-43 T 11-10-2018 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 135 717 2.6E-279 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Gene3D G3DSA:3.40.50.10050 513 620 4.1E-39 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Gene3D G3DSA:1.10.10.2480 1 67 2.0E-15 T 11-10-2018 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.1E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 145 191 2.2E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 SUPERFAMILY SSF52540 214 390 2.83E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Gene3D G3DSA:2.40.30.10 621 718 2.1E-34 T 11-10-2018 UP17_07995 daae9d7768ddd551fc52efcbcb4f866a 718 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 717 17.511 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 14 201 3.6E-81 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 SUPERFAMILY SSF52402 193 411 1.12E-62 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 Gene3D G3DSA:3.40.50.880 6 201 3.4E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_01870 33f77385fb867fcc847569843c29c8d0 518 Gene3D G3DSA:3.40.50.620 205 398 7.4E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_01870 33f77385fb867fcc847569843c29c8d0 518 Pfam PF00117 Glutamine amidotransferase class-I 15 195 1.0E-43 T 11-10-2018 IPR017926 Glutamine amidotransferase UP17_01870 33f77385fb867fcc847569843c29c8d0 518 Gene3D G3DSA:3.30.300.10 399 518 6.7E-52 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 SUPERFAMILY SSF54810 398 518 6.41E-51 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 11 518 55.058 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 Pfam PF00958 GMP synthase C terminal domain 426 517 3.8E-45 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 14 28 5.9E-7 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 85 101 5.9E-7 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 55 69 5.9E-7 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 Pfam PF02540 NAD synthase 216 260 5.8E-6 T 11-10-2018 IPR022310 NAD/GMP synthase UP17_01870 33f77385fb867fcc847569843c29c8d0 518 SUPERFAMILY SSF52317 12 206 1.11E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_01870 33f77385fb867fcc847569843c29c8d0 518 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 518 4.3E-158 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 58 67 1.0E-6 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 85 96 1.0E-6 T 11-10-2018 UP17_01870 33f77385fb867fcc847569843c29c8d0 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.0E-6 T 11-10-2018 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 SMART SM00919 273 533 3.4E-114 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 Gene3D G3DSA:3.40.50.10380 15 270 1.8E-96 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 Pfam PF00390 Malic enzyme, N-terminal domain 82 262 1.3E-67 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 Gene3D G3DSA:3.40.50.720 271 564 1.6E-104 T 11-10-2018 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 SUPERFAMILY SSF51735 273 562 8.67E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 Pfam PF03949 Malic enzyme, NAD binding domain 273 533 2.3E-98 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PRINTS PR00072 Malic enzyme signature 269 285 3.1E-66 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PRINTS PR00072 Malic enzyme signature 244 262 3.1E-66 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PRINTS PR00072 Malic enzyme signature 411 427 3.1E-66 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PRINTS PR00072 Malic enzyme signature 87 111 3.1E-66 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PRINTS PR00072 Malic enzyme signature 300 316 3.1E-66 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PRINTS PR00072 Malic enzyme signature 185 207 3.1E-66 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PRINTS PR00072 Malic enzyme signature 149 178 3.1E-66 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 SUPERFAMILY SSF53223 10 272 1.15E-97 T 11-10-2018 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 PIRSF PIRSF000106 1 564 1.7E-216 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_06620 dac1a84f60e66ec0e77788fa8c3c8c30 564 SMART SM01274 81 263 3.2E-84 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 Pfam PF00561 alpha/beta hydrolase fold 20 253 3.2E-29 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 267 36.115 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 SUPERFAMILY SSF53474 6 268 1.77E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 267 5.9E-87 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 5.9E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 5.9E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 5.9E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22185 856fe353cff6f67c3aa8180f63170ec6 273 Gene3D G3DSA:3.40.50.1820 6 270 3.0E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_01180 ed772b11aa1c708b98adc4decc462411 636 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 452 8.9E-191 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 Pfam PF00367 phosphotransferase system, EIIB 386 416 1.1E-11 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 Pfam PF02378 Phosphotransferase system, EIIC 9 293 7.2E-76 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 SUPERFAMILY SSF51261 487 619 2.09E-51 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_01180 ed772b11aa1c708b98adc4decc462411 636 Gene3D G3DSA:2.70.70.10 475 635 1.9E-57 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_01180 ed772b11aa1c708b98adc4decc462411 636 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 394 411 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 488 608 4.6E-49 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 Gene3D G3DSA:3.30.1360.60 381 456 2.1E-23 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 550 562 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 SUPERFAMILY SSF55604 384 454 1.16E-18 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 352 441 6.1E-18 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 UP17_01180 ed772b11aa1c708b98adc4decc462411 636 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 490 608 5.0E-45 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.30 215 458 2.7E-153 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3494 3642 3.0E-35 T 11-10-2018 IPR010060 Non-ribosomal peptide synthase UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF56801 4073 4635 8.63E-155 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3128 3143 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SMART SM00823 Phosphopantetheine attachment site 3104 3172 0.0012 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SMART SM00823 Phosphopantetheine attachment site 4622 4691 0.12 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SMART SM00823 Phosphopantetheine attachment site 1005 1074 1.4E-10 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SMART SM00823 Phosphopantetheine attachment site 2048 2117 7.9E-8 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF53474 4690 4945 1.01E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF47336 3096 3168 7.85E-18 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 3375 3619 1.02E-41 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.30 3843 4091 7.8E-127 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 3654 3857 2.22E-42 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF47336 999 1106 6.81E-23 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF56801 1517 2060 1.7E-148 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 2324 2585 1.0E-62 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.40.50.12780 4102 4509 3.1E-134 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.40.50.12780 2586 2993 7.2E-135 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.40.50.12780 1543 1938 1.3E-126 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00501 AMP-binding enzyme 4116 4515 6.4E-100 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00501 AMP-binding enzyme 1558 1944 4.4E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00501 AMP-binding enzyme 496 900 2.4E-110 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00501 AMP-binding enzyme 2600 2999 3.6E-99 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 3842 4101 5.89E-53 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF56801 453 1018 3.01E-176 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:1.10.1200.10 3092 3172 2.2E-23 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:1.10.1200.10 993 1080 5.0E-26 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00668 Condensation domain 1093 1537 1.6E-117 T 11-10-2018 IPR001242 Condensation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00668 Condensation domain 30 476 7.5E-125 T 11-10-2018 IPR001242 Condensation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00668 Condensation domain 2136 2580 4.2E-119 T 11-10-2018 IPR001242 Condensation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00668 Condensation domain 3183 3617 3.6E-85 T 11-10-2018 IPR001242 Condensation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00668 Condensation domain 3657 4096 5.7E-93 T 11-10-2018 IPR001242 Condensation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 34 211 1.11E-49 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00975 Thioesterase domain 4709 4932 4.9E-31 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.30 1277 1523 1.6E-157 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.40.50.1820 4615 4948 8.9E-82 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00012 Phosphopantetheine attachment site. 4646 4661 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 1281 1545 1.33E-62 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF47336 4616 4687 3.14E-17 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1694 1705 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 2139 2316 7.89E-53 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00550 Phosphopantetheine attachment site 3107 3167 7.4E-13 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00550 Phosphopantetheine attachment site 1007 1069 8.7E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00550 Phosphopantetheine attachment site 2050 2112 1.3E-13 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF00550 Phosphopantetheine attachment site 4624 4684 1.5E-13 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.10 2138 2510 3.8E-157 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:1.10.1200.10 2038 2118 7.3E-26 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.10 3661 4027 7.8E-127 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.30 2320 2565 3.8E-157 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.30 3355 3620 9.4E-75 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.300.30 1939 2037 5.6E-33 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.300.30 894 992 2.3E-35 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.300.30 4510 4612 1.1E-34 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.300.30 2994 3091 3.0E-34 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF47336 2042 2149 4.32E-21 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.40.50.12780 489 893 3.0E-148 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF56801 2558 3116 1.1E-155 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.10 1095 1467 1.6E-157 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2072 2087 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 3187 3364 7.45E-36 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4257 4268 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 219 483 8.34E-66 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00455 Putative AMP-binding domain signature. 637 648 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2741 2752 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.10 33 405 2.7E-153 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF13193 AMP-binding enzyme C-terminal domain 908 979 6.7E-11 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF13193 AMP-binding enzyme C-terminal domain 3007 3078 1.0E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF13193 AMP-binding enzyme C-terminal domain 4523 4594 4.5E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Pfam PF13193 AMP-binding enzyme C-terminal domain 1952 2023 4.6E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1029 1044 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 Gene3D G3DSA:3.30.559.10 3173 3354 4.5E-57 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 SUPERFAMILY SSF52777 1096 1273 1.22E-50 T 11-10-2018 UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 517 924 1.7E-144 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4137 4539 4.5E-129 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2621 3023 9.1E-130 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_11020 34868c7b417c7e82605e75986c9ed2cb 4956 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1579 1968 1.4E-124 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_10460 fa1945daeee88eedf81759a2e2927cbd 178 PIRSF PIRSF015617 1 178 3.6E-57 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 UP17_10460 fa1945daeee88eedf81759a2e2927cbd 178 Gene3D G3DSA:3.40.50.300 1 178 1.8E-58 T 11-10-2018 UP17_10460 fa1945daeee88eedf81759a2e2927cbd 178 SUPERFAMILY SSF52540 3 178 3.79E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10460 fa1945daeee88eedf81759a2e2927cbd 178 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 4 178 3.5E-55 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 UP17_12430 39294c0905eeff68ba890a78846467a8 181 Pfam PF01381 Helix-turn-helix 11 61 6.5E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_12430 39294c0905eeff68ba890a78846467a8 181 Gene3D G3DSA:1.10.260.40 3 71 1.5E-17 T 11-10-2018 UP17_12430 39294c0905eeff68ba890a78846467a8 181 Gene3D G3DSA:2.60.120.10 72 176 9.3E-18 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_12430 39294c0905eeff68ba890a78846467a8 181 SUPERFAMILY SSF51182 57 181 6.5E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_12430 39294c0905eeff68ba890a78846467a8 181 SMART SM00530 9 64 2.3E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_12430 39294c0905eeff68ba890a78846467a8 181 Pfam PF07883 Cupin domain 120 174 1.8E-13 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_12430 39294c0905eeff68ba890a78846467a8 181 SUPERFAMILY SSF47413 3 71 1.24E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 Pfam PF06580 Histidine kinase 382 458 3.1E-22 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 Pfam PF00672 HAMP domain 318 364 2.7E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 Gene3D G3DSA:3.30.450.20 174 293 6.0E-8 T 11-10-2018 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 Gene3D G3DSA:3.30.565.10 442 593 7.0E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 Gene3D G3DSA:1.10.287.130 315 434 9.5E-7 T 11-10-2018 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 SMART SM00304 317 369 1.3E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 585 2.3E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 Pfam PF02743 Cache domain 34 262 1.1E-12 T 11-10-2018 IPR033479 Double Cache domain 1 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 SUPERFAMILY SSF158472 318 368 2.22E-7 T 11-10-2018 UP17_13725 d98bd8a07f7c93fdc52a294ae5a3087f 600 SUPERFAMILY SSF55874 435 584 1.96E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23135 f4a0167ad9ffa739b21282300ed17b07 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 406 2.1E-192 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 UP17_23135 f4a0167ad9ffa739b21282300ed17b07 409 PIRSF PIRSF005572 20 408 3.6E-54 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 UP17_23135 f4a0167ad9ffa739b21282300ed17b07 409 Gene3D G3DSA:3.90.1150.10 6 397 4.7E-185 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_23135 f4a0167ad9ffa739b21282300ed17b07 409 SUPERFAMILY SSF53383 4 400 1.99E-133 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_23135 f4a0167ad9ffa739b21282300ed17b07 409 Pfam PF00266 Aminotransferase class-V 23 394 6.1E-165 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_23135 f4a0167ad9ffa739b21282300ed17b07 409 Gene3D G3DSA:3.40.640.10 34 294 4.7E-185 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_23135 f4a0167ad9ffa739b21282300ed17b07 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site UP17_10550 65d3d97c0afaa609c31bb402f54fad00 191 Gene3D G3DSA:1.10.357.10 68 191 3.7E-25 T 11-10-2018 UP17_10550 65d3d97c0afaa609c31bb402f54fad00 191 Gene3D G3DSA:1.10.10.60 1 65 2.3E-26 T 11-10-2018 UP17_10550 65d3d97c0afaa609c31bb402f54fad00 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 1.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_10550 65d3d97c0afaa609c31bb402f54fad00 191 SUPERFAMILY SSF46689 2 72 2.51E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_10550 65d3d97c0afaa609c31bb402f54fad00 191 Pfam PF16925 Bacterial transcriptional repressor C-terminal 97 187 2.3E-6 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal UP17_10550 65d3d97c0afaa609c31bb402f54fad00 191 SUPERFAMILY SSF48498 79 190 3.77E-21 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 Gene3D G3DSA:3.40.50.1370 143 311 8.6E-124 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 56 70 2.2E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 294 305 2.2E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 89 102 2.2E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 232 242 2.2E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00102 Ornithine carbamoyltransferase signature 129 143 2.2E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 Gene3D G3DSA:3.40.50.1370 13 142 8.6E-124 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 153 2.6E-49 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 SUPERFAMILY SSF53671 11 315 4.32E-105 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 13 315 9.7E-131 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 5.9E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 280 303 5.9E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 140 151 5.9E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 58 77 5.9E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 58 65 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 12 316 79.342 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 UP17_05890 2fdaf288dbf53bf89ed563d6e4a6aca0 316 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 312 7.3E-60 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 Gene3D G3DSA:1.10.40.30 349 430 1.8E-34 T 11-10-2018 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.5E-26 T 11-10-2018 IPR000362 Fumarate lyase family UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.5E-26 T 11-10-2018 IPR000362 Fumarate lyase family UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.5E-26 T 11-10-2018 IPR000362 Fumarate lyase family UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.5E-26 T 11-10-2018 IPR000362 Fumarate lyase family UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 2.6E-25 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 Pfam PF00206 Lyase 6 286 2.9E-79 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.6E-184 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 SMART SM00998 349 429 1.0E-38 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 Gene3D G3DSA:1.20.200.10 93 348 8.2E-105 T 11-10-2018 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 SUPERFAMILY SSF48557 3 427 4.87E-142 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 Gene3D G3DSA:1.10.275.10 1 92 4.7E-39 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 3.4E-9 T 11-10-2018 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 3.4E-9 T 11-10-2018 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 3.4E-9 T 11-10-2018 UP17_01960 4880c9e19252551388df92c6ef0e5be1 430 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 3.4E-9 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 SUPERFAMILY SSF51246 340 458 5.13E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Gene3D G3DSA:3.20.20.70 512 816 7.9E-284 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 325 2.2E-79 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 SMART SM00878 345 452 1.1E-48 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 7 1143 0.0 T 11-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Pfam PF00682 HMGL-like 532 804 1.2E-23 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 PIRSF PIRSF001594 1 1145 0.0 T 11-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 SUPERFAMILY SSF52440 4 116 1.29E-43 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 SUPERFAMILY SSF56059 87 329 9.72E-69 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Gene3D G3DSA:1.10.472.90 817 941 7.9E-284 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Pfam PF02785 Biotin carboxylase C-terminal domain 345 452 5.7E-31 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 SUPERFAMILY SSF89000 832 1009 3.53E-59 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Gene3D G3DSA:3.30.470.130 1 460 4.1E-190 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 SUPERFAMILY SSF51569 524 835 1.21E-81 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Pfam PF02436 Conserved carboxylase domain 827 1027 3.4E-78 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Gene3D G3DSA:3.10.600.10 509 1059 7.9E-284 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 5.9E-41 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Pfam PF00364 Biotin-requiring enzyme 1077 1143 4.7E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Gene3D G3DSA:2.40.50.100 1067 1145 4.3E-25 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Gene3D G3DSA:1.10.10.2790 942 977 7.9E-284 T 11-10-2018 UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 SUPERFAMILY SSF51230 1068 1143 3.27E-22 T 11-10-2018 IPR011053 Single hybrid motif UP17_07105 013bd4cf24b8133b687d6ae94b03e470 1145 Gene3D G3DSA:3.10.600.10 462 494 4.4E-7 T 11-10-2018 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 349 358 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 Gene3D G3DSA:1.10.630.10 2 411 5.2E-115 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 SUPERFAMILY SSF48264 19 410 3.54E-84 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 347 356 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 356 367 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 155 170 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 198 220 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 325 340 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 280 291 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 297 324 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 92 103 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00359 B-class P450 signature 138 154 3.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 Pfam PF00067 Cytochrome P450 37 380 3.1E-42 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00385 P450 superfamily signature 244 261 3.2E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00385 P450 superfamily signature 356 367 3.2E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_19080 e6cccf47a55c9741daa500a43850134b 412 PRINTS PR00385 P450 superfamily signature 347 356 3.2E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 Pfam PF00717 Peptidase S24-like 124 190 1.1E-19 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 SUPERFAMILY SSF51306 83 204 6.8E-38 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 SUPERFAMILY SSF46785 3 70 6.39E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 Gene3D G3DSA:1.10.10.10 2 68 4.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 Gene3D G3DSA:2.10.109.10 89 206 9.1E-44 T 11-10-2018 UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 Pfam PF01726 LexA DNA binding domain 1 65 3.7E-29 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 4.9E-82 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 173 6.3E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 121 131 6.3E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 132 143 6.3E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 UP17_09290 cd97ab121192b3417510086ab5b7d9a2 207 Hamap MF_00015 LexA repressor [lexA]. 3 206 35.445 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 SUPERFAMILY SSF50685 206 251 1.29E-8 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 Pfam PF01471 Putative peptidoglycan binding domain 106 159 7.8E-14 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 Pfam PF01471 Putative peptidoglycan binding domain 40 93 7.9E-14 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 Pfam PF06725 3D domain 206 264 5.0E-20 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 SUPERFAMILY SSF47090 97 160 1.39E-17 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 Gene3D G3DSA:2.40.40.10 166 257 3.0E-5 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 Gene3D G3DSA:1.10.101.10 96 165 2.6E-21 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 SUPERFAMILY SSF47090 28 96 1.07E-16 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_20845 d70c9e30ae64099d1f0814bc4d1b9233 265 Gene3D G3DSA:1.10.101.10 28 95 4.6E-19 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_01965 392c62cdbe8ad582618138e69b877861 239 SUPERFAMILY SSF56104 2 237 3.6E-80 T 11-10-2018 UP17_01965 392c62cdbe8ad582618138e69b877861 239 Gene3D G3DSA:3.30.200.20 7 231 1.3E-94 T 11-10-2018 UP17_01965 392c62cdbe8ad582618138e69b877861 239 Pfam PF01259 SAICAR synthetase 7 230 1.1E-63 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_01965 392c62cdbe8ad582618138e69b877861 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 31.802 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_01965 392c62cdbe8ad582618138e69b877861 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 3.0E-74 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 UP17_01965 392c62cdbe8ad582618138e69b877861 239 Gene3D G3DSA:3.30.470.20 85 221 1.3E-94 T 11-10-2018 UP17_01965 392c62cdbe8ad582618138e69b877861 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_01965 392c62cdbe8ad582618138e69b877861 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_13400 fab8901c91444f200b549e8fa68f75e5 147 SUPERFAMILY SSF55961 6 142 1.04E-21 T 11-10-2018 UP17_13400 fab8901c91444f200b549e8fa68f75e5 147 Gene3D G3DSA:3.30.530.20 5 144 2.6E-18 T 11-10-2018 IPR023393 START-like domain superfamily UP17_13400 fab8901c91444f200b549e8fa68f75e5 147 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 11 143 3.5E-8 T 11-10-2018 IPR010419 Carbon monoxide dehydrogenase subunit G UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 SUPERFAMILY SSF47384 312 377 5.1E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 SMART SM00388 313 379 8.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 Gene3D G3DSA:3.30.450.20 196 306 6.0E-5 T 11-10-2018 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 530 9.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 511 9.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 476 9.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 490 9.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 532 2.3E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 SUPERFAMILY SSF55874 369 531 5.11E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 Pfam PF01590 GAF domain 53 189 1.6E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 Gene3D G3DSA:1.10.287.130 307 377 8.9E-20 T 11-10-2018 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 Gene3D G3DSA:3.30.450.40 34 195 9.0E-23 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 SMART SM00065 53 199 5.5E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 Gene3D G3DSA:3.30.565.10 381 537 1.9E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 SUPERFAMILY SSF55781 32 197 6.32E-16 T 11-10-2018 UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 SMART SM00387 421 533 1.5E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02220 64c46e2c11e0a5589b91d6aefb201cb7 538 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 377 2.1E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_25295 331d3664382799240b749c9699e5a4d4 212 SUPERFAMILY SSF56235 1 203 2.85E-8 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_25295 331d3664382799240b749c9699e5a4d4 212 Pfam PF00227 Proteasome subunit 4 185 3.1E-6 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 UP17_25295 331d3664382799240b749c9699e5a4d4 212 Gene3D G3DSA:3.60.20.10 1 201 6.4E-13 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_22735 1969d70287dd3a78a3471fd1e24c1697 397 SUPERFAMILY SSF103473 7 390 1.57E-59 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_22735 1969d70287dd3a78a3471fd1e24c1697 397 Pfam PF07690 Major Facilitator Superfamily 18 236 8.1E-27 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_22735 1969d70287dd3a78a3471fd1e24c1697 397 Gene3D G3DSA:1.20.1250.20 8 396 5.0E-54 T 11-10-2018 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 Gene3D G3DSA:1.10.10.60 535 597 2.8E-16 T 11-10-2018 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 313 326 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 Gene3D G3DSA:1.10.8.60 463 532 8.1E-14 T 11-10-2018 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 574 594 2.7E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 557 574 2.7E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 Pfam PF01590 GAF domain 87 179 1.9E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 Gene3D G3DSA:3.30.450.40 1 180 1.1E-51 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 SUPERFAMILY SSF46689 500 593 4.18E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 SUPERFAMILY SSF55781 104 189 1.05E-6 T 11-10-2018 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 SUPERFAMILY SSF52540 288 529 4.52E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 SMART SM00382 309 453 2.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 Pfam PF02954 Bacterial regulatory protein, Fis family 555 591 1.4E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 376 391 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 Pfam PF00158 Sigma-54 interaction domain 289 456 8.7E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_13270 3a76d621bbfe5b5b32be8843b649154c 597 Gene3D G3DSA:3.40.50.300 276 461 1.2E-64 T 11-10-2018 UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 474 484 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 SUPERFAMILY SSF52025 329 427 1.83E-16 T 11-10-2018 UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 140 151 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 Gene3D G3DSA:3.50.30.30 310 432 9.4E-28 T 11-10-2018 UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 Pfam PF00082 Subtilase family 135 528 1.0E-66 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 Pfam PF02225 PA domain 348 412 8.1E-13 T 11-10-2018 IPR003137 PA domain UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 SUPERFAMILY SSF52743 72 577 1.31E-80 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 184 194 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 193 6.4E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 PRINTS PR00723 Subtilisin serine protease family (S8) signature 473 489 6.4E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_24185 35047dab7df3f6ce77b4ea58f2ea9959 742 PRINTS PR00723 Subtilisin serine protease family (S8) signature 135 154 6.4E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_02320 563e4908f0f1ec796a312e18ed3c77ac 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 1.0E-31 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 UP17_02320 563e4908f0f1ec796a312e18ed3c77ac 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 194 3.8E-8 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 UP17_02320 563e4908f0f1ec796a312e18ed3c77ac 346 SUPERFAMILY SSF51735 3 153 3.38E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_02320 563e4908f0f1ec796a312e18ed3c77ac 346 Gene3D G3DSA:3.30.360.10 128 341 6.2E-92 T 11-10-2018 UP17_02320 563e4908f0f1ec796a312e18ed3c77ac 346 Gene3D G3DSA:3.40.50.720 7 319 6.2E-92 T 11-10-2018 UP17_02320 563e4908f0f1ec796a312e18ed3c77ac 346 SUPERFAMILY SSF55347 132 321 8.99E-29 T 11-10-2018 UP17_10660 a68e31182784d60cdc46bd1589958a11 98 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 88 3.4E-9 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 UP17_10660 a68e31182784d60cdc46bd1589958a11 98 SUPERFAMILY SSF89360 1 94 1.57E-12 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_10660 a68e31182784d60cdc46bd1589958a11 98 PIRSF PIRSF034852 1 96 8.8E-38 T 11-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 UP17_01785 278b8bd339b6ac7244c582fb096c2fa3 390 Pfam PF01979 Amidohydrolase family 53 376 2.7E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_01785 278b8bd339b6ac7244c582fb096c2fa3 390 Gene3D G3DSA:3.20.20.140 58 343 4.6E-152 T 11-10-2018 UP17_01785 278b8bd339b6ac7244c582fb096c2fa3 390 Gene3D G3DSA:2.30.40.10 4 390 4.6E-152 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_01785 278b8bd339b6ac7244c582fb096c2fa3 390 PIRSF PIRSF001238 1 390 1.7E-165 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 UP17_01785 278b8bd339b6ac7244c582fb096c2fa3 390 SUPERFAMILY SSF51338 2 380 1.08E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_01785 278b8bd339b6ac7244c582fb096c2fa3 390 SUPERFAMILY SSF51556 57 347 2.53E-74 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_01785 278b8bd339b6ac7244c582fb096c2fa3 390 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 390 2.7E-171 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 UP17_21730 e0ad48c5efd556c926e7320f55a1edcd 207 Pfam PF16291 Domain of unknown function (DUF4937 2 90 6.6E-32 T 11-10-2018 IPR032555 Domain of unknown function DUF4937 UP17_21730 e0ad48c5efd556c926e7320f55a1edcd 207 SUPERFAMILY SSF54909 1 76 1.34E-6 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_09185 8da6e0559d6095ac682aeee307094569 232 SUPERFAMILY SSF46785 151 226 1.34E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09185 8da6e0559d6095ac682aeee307094569 232 SUPERFAMILY SSF51206 26 142 3.4E-25 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like UP17_09185 8da6e0559d6095ac682aeee307094569 232 Pfam PF13545 Crp-like helix-turn-helix domain 154 225 4.3E-10 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UP17_09185 8da6e0559d6095ac682aeee307094569 232 Gene3D G3DSA:1.10.10.10 151 229 2.2E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09185 8da6e0559d6095ac682aeee307094569 232 Pfam PF00027 Cyclic nucleotide-binding domain 36 116 8.2E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain UP17_09185 8da6e0559d6095ac682aeee307094569 232 Gene3D G3DSA:2.60.120.10 6 145 1.3E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_23030 f73e5c323eec596d4a679648b3dbdf7c 353 TIGRFAM TIGR00260 thrC: threonine synthase 7 323 2.0E-105 T 11-10-2018 IPR004450 Threonine synthase-like UP17_23030 f73e5c323eec596d4a679648b3dbdf7c 353 Gene3D G3DSA:3.40.50.1100 10 322 2.7E-122 T 11-10-2018 UP17_23030 f73e5c323eec596d4a679648b3dbdf7c 353 Gene3D G3DSA:3.40.50.1100 59 155 2.7E-122 T 11-10-2018 UP17_23030 f73e5c323eec596d4a679648b3dbdf7c 353 PIRSF PIRSF038945 1 348 1.4E-160 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 UP17_23030 f73e5c323eec596d4a679648b3dbdf7c 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 UP17_23030 f73e5c323eec596d4a679648b3dbdf7c 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 316 5.9E-77 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_23030 f73e5c323eec596d4a679648b3dbdf7c 353 SUPERFAMILY SSF53686 5 337 2.62E-106 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_14280 3f2953817a2b3c78880662a1b793e214 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 211 3.0E-90 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 UP17_14280 3f2953817a2b3c78880662a1b793e214 221 SUPERFAMILY SSF100950 7 219 2.88E-67 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_14280 3f2953817a2b3c78880662a1b793e214 221 SMART SM00882 9 205 2.0E-57 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_14280 3f2953817a2b3c78880662a1b793e214 221 Gene3D G3DSA:3.40.1080.10 4 217 2.2E-86 T 11-10-2018 UP17_14280 3f2953817a2b3c78880662a1b793e214 221 Pfam PF01144 Coenzyme A transferase 10 189 3.5E-36 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_01115 46a2bea9bfc2a3df70a4b7cc88332d93 180 Gene3D G3DSA:2.60.120.10 69 175 1.1E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_01115 46a2bea9bfc2a3df70a4b7cc88332d93 180 SUPERFAMILY SSF51182 54 177 2.43E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_01115 46a2bea9bfc2a3df70a4b7cc88332d93 180 SUPERFAMILY SSF47413 1 66 3.94E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_01115 46a2bea9bfc2a3df70a4b7cc88332d93 180 Gene3D G3DSA:1.10.260.40 1 68 9.0E-22 T 11-10-2018 UP17_01115 46a2bea9bfc2a3df70a4b7cc88332d93 180 Pfam PF01381 Helix-turn-helix 7 58 1.5E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_01115 46a2bea9bfc2a3df70a4b7cc88332d93 180 SMART SM00530 6 61 2.6E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_01115 46a2bea9bfc2a3df70a4b7cc88332d93 180 Pfam PF07883 Cupin domain 124 174 1.8E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 Gene3D G3DSA:1.10.60.40 326 414 5.7E-144 T 11-10-2018 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 SUPERFAMILY SSF53649 34 452 1.89E-125 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 ProSitePatterns PS00123 Alkaline phosphatase active site. 97 105 - T 11-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 Pfam PF00245 Alkaline phosphatase 42 452 4.8E-134 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 Gene3D G3DSA:3.40.720.10 46 444 5.7E-144 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 PRINTS PR00113 Alkaline phosphatase signature 250 279 8.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 PRINTS PR00113 Alkaline phosphatase signature 42 62 8.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 PRINTS PR00113 Alkaline phosphatase signature 184 194 8.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 PRINTS PR00113 Alkaline phosphatase signature 97 112 8.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 PRINTS PR00113 Alkaline phosphatase signature 134 154 8.4E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_22595 462e6c1df785046f90abc5d4336d78f5 454 SMART SM00098 43 454 1.0E-197 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 UP17_25075 e1c9a652825195075ea4b2809c221a47 221 Pfam PF00990 Diguanylate cyclase, GGDEF domain 56 206 7.0E-32 T 11-10-2018 IPR000160 GGDEF domain UP17_25075 e1c9a652825195075ea4b2809c221a47 221 Gene3D G3DSA:3.30.70.270 49 217 7.5E-35 T 11-10-2018 UP17_25075 e1c9a652825195075ea4b2809c221a47 221 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 55 209 1.0E-31 T 11-10-2018 IPR000160 GGDEF domain UP17_25075 e1c9a652825195075ea4b2809c221a47 221 SMART SM00267 45 214 1.5E-22 T 11-10-2018 IPR000160 GGDEF domain UP17_25075 e1c9a652825195075ea4b2809c221a47 221 SUPERFAMILY SSF55073 61 206 3.22E-30 T 11-10-2018 IPR029787 Nucleotide cyclase UP17_03195 989d0c65c033c0c16e513a0fa4cdfbfe 327 SUPERFAMILY SSF53901 4 325 1.07E-65 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_03195 989d0c65c033c0c16e513a0fa4cdfbfe 327 Gene3D G3DSA:3.40.47.10 2 327 4.7E-119 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_03195 989d0c65c033c0c16e513a0fa4cdfbfe 327 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 187 1.8E-30 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_03195 989d0c65c033c0c16e513a0fa4cdfbfe 327 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 238 325 1.7E-29 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_03195 989d0c65c033c0c16e513a0fa4cdfbfe 327 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 325 65.238 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_03195 989d0c65c033c0c16e513a0fa4cdfbfe 327 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 325 6.6E-110 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_21560 c6280d44ed329788e0d1655e2a46c160 109 Gene3D G3DSA:1.10.10.10 4 109 9.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21560 c6280d44ed329788e0d1655e2a46c160 109 Pfam PF03551 Transcriptional regulator PadR-like family 19 91 1.7E-19 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_21560 c6280d44ed329788e0d1655e2a46c160 109 SUPERFAMILY SSF46785 9 108 1.09E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10745 a5463bc1bfba684e6a23b923f6340027 114 Pfam PF06304 Protein of unknown function (DUF1048) 7 106 1.4E-36 T 11-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 UP17_10745 a5463bc1bfba684e6a23b923f6340027 114 Gene3D G3DSA:1.10.1900.10 1 108 2.2E-36 T 11-10-2018 UP17_10745 a5463bc1bfba684e6a23b923f6340027 114 SUPERFAMILY SSF158560 1 106 2.62E-32 T 11-10-2018 UP17_11225 a5463bc1bfba684e6a23b923f6340027 114 Pfam PF06304 Protein of unknown function (DUF1048) 7 106 1.4E-36 T 11-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 UP17_11225 a5463bc1bfba684e6a23b923f6340027 114 Gene3D G3DSA:1.10.1900.10 1 108 2.2E-36 T 11-10-2018 UP17_11225 a5463bc1bfba684e6a23b923f6340027 114 SUPERFAMILY SSF158560 1 106 2.62E-32 T 11-10-2018 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 475 2.9E-27 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 Gene3D G3DSA:3.50.50.60 289 488 3.3E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 Gene3D G3DSA:3.50.50.60 152 281 3.8E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 1.4E-25 T 11-10-2018 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 1.4E-25 T 11-10-2018 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 1.4E-25 T 11-10-2018 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 1.4E-25 T 11-10-2018 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 Gene3D G3DSA:1.10.1060.10 9 151 5.0E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 SUPERFAMILY SSF51971 151 421 8.24E-62 T 11-10-2018 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 140 2.6E-21 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 493 9.5E-243 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 UP17_21960 6f4afeb8ebca30a8c3e71569a4edd273 493 SUPERFAMILY SSF46548 2 163 4.13E-34 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_20930 45c2dc1a58682c8a02863b96995116e1 283 Gene3D G3DSA:3.40.190.10 162 231 5.1E-9 T 11-10-2018 UP17_20930 45c2dc1a58682c8a02863b96995116e1 283 SUPERFAMILY SSF53850 91 261 9.23E-8 T 11-10-2018 UP17_20930 45c2dc1a58682c8a02863b96995116e1 283 Pfam PF03466 LysR substrate binding domain 92 234 8.4E-8 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_20930 45c2dc1a58682c8a02863b96995116e1 283 SUPERFAMILY SSF46785 1 86 2.18E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20930 45c2dc1a58682c8a02863b96995116e1 283 Gene3D G3DSA:3.40.190.10 117 161 5.1E-9 T 11-10-2018 UP17_20930 45c2dc1a58682c8a02863b96995116e1 283 Gene3D G3DSA:1.10.10.10 1 92 2.5E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 403 155.085 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 SUPERFAMILY SSF143437 3 173 1.26E-49 T 11-10-2018 UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 Gene3D G3DSA:3.30.2130.30 1 174 4.0E-54 T 11-10-2018 UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 371 5.7E-66 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 Gene3D G3DSA:3.40.50.620 175 403 3.2E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 Pfam PF02926 THUMP domain 37 162 2.4E-20 T 11-10-2018 IPR004114 THUMP domain GO:0003723 UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 SUPERFAMILY SSF52402 175 384 5.95E-51 T 11-10-2018 UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 SMART SM00981 74 165 2.8E-23 T 11-10-2018 IPR004114 THUMP domain GO:0003723 UP17_18395 d497d0bebb9aec012d29f42461d1315b 403 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 373 2.7E-125 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 PIRSF PIRSF001365 6 305 4.1E-91 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 Gene3D G3DSA:3.20.20.70 9 300 1.5E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 7.0E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 7.0E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 7.0E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 7.0E-27 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 12 295 1.6E-94 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 SUPERFAMILY SSF51569 9 297 8.37E-99 T 11-10-2018 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 Pfam PF00701 Dihydrodipicolinate synthetase family 9 294 5.7E-90 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 TIGRFAM TIGR02313 HpaI-NOT-DapA: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 9 300 1.6E-142 T 11-10-2018 IPR012691 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase variant GO:0005737|GO:0008840|GO:0019877 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 171 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 SMART SM01130 8 297 1.2E-127 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_15230 0a99d79908853bc3bd70b4ceb3c2036c 305 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 8 295 55.424 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_06990 b377b6cbbae0f23668b91f6a251c1125 485 Gene3D G3DSA:3.90.1150.10 311 416 5.3E-8 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_06990 b377b6cbbae0f23668b91f6a251c1125 485 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 370 3.5E-112 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 UP17_06990 b377b6cbbae0f23668b91f6a251c1125 485 Gene3D G3DSA:3.90.105.10 420 477 3.3E-19 T 11-10-2018 UP17_06990 b377b6cbbae0f23668b91f6a251c1125 485 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 378 460 3.1E-11 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 UP17_06990 b377b6cbbae0f23668b91f6a251c1125 485 SUPERFAMILY SSF55904 341 484 1.96E-39 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 UP17_06990 b377b6cbbae0f23668b91f6a251c1125 485 Gene3D G3DSA:3.40.640.10 6 282 3.2E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_06990 b377b6cbbae0f23668b91f6a251c1125 485 SUPERFAMILY SSF53383 6 386 6.93E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05070 e277857de8f507a44d7bb3b8334736d1 485 Gene3D G3DSA:3.30.750.24 385 481 1.1E-25 T 11-10-2018 IPR036513 STAS domain superfamily UP17_05070 e277857de8f507a44d7bb3b8334736d1 485 SUPERFAMILY SSF52091 397 477 5.69E-10 T 11-10-2018 IPR036513 STAS domain superfamily UP17_05070 e277857de8f507a44d7bb3b8334736d1 485 Pfam PF00916 Sulfate permease family 162 355 4.0E-30 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 UP17_05070 e277857de8f507a44d7bb3b8334736d1 485 Pfam PF00916 Sulfate permease family 15 142 3.1E-28 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 UP17_05070 e277857de8f507a44d7bb3b8334736d1 485 Pfam PF01740 STAS domain 388 476 4.2E-8 T 11-10-2018 IPR002645 STAS domain UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 Gene3D G3DSA:3.30.9.10 128 340 2.5E-44 T 11-10-2018 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 PRINTS PR00162 Rieske 2Fe-2S subunit signature 490 502 1.8E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 PRINTS PR00162 Rieske 2Fe-2S subunit signature 478 490 1.8E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 PRINTS PR00162 Rieske 2Fe-2S subunit signature 457 468 1.8E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 Pfam PF01266 FAD dependent oxidoreductase 35 380 1.3E-44 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 SUPERFAMILY SSF50022 422 505 1.44E-24 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 Pfam PF00355 Rieske [2Fe-2S] domain 435 505 1.1E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 Gene3D G3DSA:2.102.10.10 406 506 4.3E-25 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 SUPERFAMILY SSF51905 32 387 2.07E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_24670 cf03f56658e02578657422bb1a6ce32a 506 Gene3D G3DSA:3.50.50.60 35 382 2.5E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_13585 eed0257b3edae2a9b2954ce882f7fe0e 68 Pfam PF14169 Cold-inducible protein YdjO 1 60 5.8E-21 T 11-10-2018 IPR025916 Cold-inducible protein YdjO UP17_01715 c20ec343d9ded853c15170191e49d496 464 SUPERFAMILY SSF49785 322 460 9.11E-15 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily UP17_01715 c20ec343d9ded853c15170191e49d496 464 Gene3D G3DSA:2.60.120.260 316 463 2.4E-18 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily UP17_01715 c20ec343d9ded853c15170191e49d496 464 Gene3D G3DSA:3.20.20.190 37 312 3.9E-79 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_01715 c20ec343d9ded853c15170191e49d496 464 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 59 169 1.0E-29 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 UP17_01715 c20ec343d9ded853c15170191e49d496 464 SUPERFAMILY SSF51695 55 305 7.85E-48 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_01715 c20ec343d9ded853c15170191e49d496 464 Pfam PF16387 Domain of unknown function 208 300 1.1E-12 T 11-10-2018 IPR032160 Domain of unknown function DUF4996 UP17_01715 c20ec343d9ded853c15170191e49d496 464 Pfam PF03422 Carbohydrate binding module (family 6) 363 461 4.1E-8 T 11-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 UP17_11870 359dcbae6754a983f8631035da8752d1 369 Gene3D G3DSA:2.40.30.110 286 369 4.8E-31 T 11-10-2018 UP17_11870 359dcbae6754a983f8631035da8752d1 369 Gene3D G3DSA:3.30.1360.120 9 241 1.5E-90 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 UP17_11870 359dcbae6754a983f8631035da8752d1 369 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 272 363 1.7E-27 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 UP17_11870 359dcbae6754a983f8631035da8752d1 369 Pfam PF01571 Aminomethyltransferase folate-binding domain 12 264 2.7E-95 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain UP17_11870 359dcbae6754a983f8631035da8752d1 369 Gene3D G3DSA:4.10.1250.10 243 284 1.1E-17 T 11-10-2018 UP17_11870 359dcbae6754a983f8631035da8752d1 369 Gene3D G3DSA:3.30.70.1400 56 141 1.5E-90 T 11-10-2018 UP17_11870 359dcbae6754a983f8631035da8752d1 369 SUPERFAMILY SSF101790 279 368 1.03E-25 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal UP17_11870 359dcbae6754a983f8631035da8752d1 369 PIRSF PIRSF006487 2 369 6.9E-110 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 UP17_11870 359dcbae6754a983f8631035da8752d1 369 SUPERFAMILY SSF103025 7 286 3.3E-97 T 11-10-2018 UP17_11870 359dcbae6754a983f8631035da8752d1 369 Hamap MF_00259 Aminomethyltransferase [gcvT]. 6 369 49.314 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 UP17_11870 359dcbae6754a983f8631035da8752d1 369 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 369 5.4E-143 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 UP17_10850 8572f05d4391cfa9c5d00524c8f62ab2 148 Pfam PF01047 MarR family 33 91 6.9E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10850 8572f05d4391cfa9c5d00524c8f62ab2 148 SUPERFAMILY SSF46785 12 142 7.31E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10850 8572f05d4391cfa9c5d00524c8f62ab2 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10850 8572f05d4391cfa9c5d00524c8f62ab2 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10850 8572f05d4391cfa9c5d00524c8f62ab2 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 116 136 1.1E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10850 8572f05d4391cfa9c5d00524c8f62ab2 148 SMART SM00347 26 126 1.0E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10850 8572f05d4391cfa9c5d00524c8f62ab2 148 Gene3D G3DSA:1.10.10.10 5 147 2.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 6.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 6.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 6.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 218 2.4E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 SMART SM00421 161 218 4.7E-29 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 Pfam PF00072 Response regulator receiver domain 5 117 1.9E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 Gene3D G3DSA:3.40.50.12740 4 224 3.0E-72 T 11-10-2018 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 SMART SM00448 3 116 3.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 SUPERFAMILY SSF52172 3 134 4.13E-36 T 11-10-2018 IPR011006 CheY-like superfamily UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23800 bb5f3ced251718ca306ecf756c82c6c4 227 SUPERFAMILY SSF46894 153 225 8.5E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_15430 95a9e0aaabcdf83479e0eb238ba399eb 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 4.4E-225 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 UP17_15430 95a9e0aaabcdf83479e0eb238ba399eb 492 Gene3D G3DSA:3.40.50.300 12 235 9.9E-9 T 11-10-2018 UP17_15430 95a9e0aaabcdf83479e0eb238ba399eb 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 1.3E-263 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 UP17_15430 95a9e0aaabcdf83479e0eb238ba399eb 492 PIRSF PIRSF007466 1 492 1.6E-266 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 UP17_15430 95a9e0aaabcdf83479e0eb238ba399eb 492 SUPERFAMILY SSF52540 19 232 1.63E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17570 cdb8813763a1a54c571484d5a7cbea2d 290 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 277 3.0E-61 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 UP17_17570 cdb8813763a1a54c571484d5a7cbea2d 290 Pfam PF04085 rod shape-determining protein MreC 122 273 8.8E-45 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 UP17_17570 cdb8813763a1a54c571484d5a7cbea2d 290 Gene3D G3DSA:2.40.10.340 112 184 1.8E-24 T 11-10-2018 UP17_17570 cdb8813763a1a54c571484d5a7cbea2d 290 PIRSF PIRSF038471 1 287 3.9E-66 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 UP17_17570 cdb8813763a1a54c571484d5a7cbea2d 290 Gene3D G3DSA:2.40.10.350 185 260 6.5E-30 T 11-10-2018 UP17_00625 60f9b008606062a68f20844149d0c26d 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 5.0E-26 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 UP17_00625 60f9b008606062a68f20844149d0c26d 141 Gene3D G3DSA:1.10.10.250 72 140 4.5E-30 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily UP17_00625 60f9b008606062a68f20844149d0c26d 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.5E-65 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00625 60f9b008606062a68f20844149d0c26d 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 2.5E-31 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal UP17_00625 60f9b008606062a68f20844149d0c26d 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00625 60f9b008606062a68f20844149d0c26d 141 Gene3D G3DSA:3.30.1550.10 2 71 3.3E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily UP17_00625 60f9b008606062a68f20844149d0c26d 141 SUPERFAMILY SSF46906 67 140 1.27E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily UP17_00625 60f9b008606062a68f20844149d0c26d 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.775 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 UP17_00625 60f9b008606062a68f20844149d0c26d 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 4.0E-16 T 11-10-2018 UP17_00625 60f9b008606062a68f20844149d0c26d 141 SMART SM00649 9 140 1.3E-88 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 UP17_00625 60f9b008606062a68f20844149d0c26d 141 SUPERFAMILY SSF54747 3 72 1.83E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 SUPERFAMILY SSF52283 1 360 1.87E-62 T 11-10-2018 UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 9.0E-84 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 SUPERFAMILY SSF51735 136 303 1.43E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 PIRSF PIRSF000183 1 371 7.9E-189 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.6E-182 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 SMART SM01003 4 136 7.8E-73 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 4.5E-45 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 SMART SM01002 148 297 4.5E-91 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 Gene3D G3DSA:3.40.50.720 129 305 3.8E-138 T 11-10-2018 UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 Gene3D G3DSA:3.40.50.720 3 353 3.8E-138 T 11-10-2018 UP17_04615 ca7769cd818db0be0c82df2a789606c8 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 UP17_09435 84fe92795fdb972d795381a45620605f 531 Gene3D G3DSA:3.20.20.70 163 527 1.5E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_09435 84fe92795fdb972d795381a45620605f 531 PIRSF PIRSF006429 2 531 2.1E-156 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein UP17_09435 84fe92795fdb972d795381a45620605f 531 SUPERFAMILY SSF51395 9 509 7.33E-111 T 11-10-2018 UP17_09435 84fe92795fdb972d795381a45620605f 531 Pfam PF01645 Conserved region in glutamate synthase 161 496 2.8E-97 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 UP17_09435 84fe92795fdb972d795381a45620605f 531 PIRSF PIRSF500060 1 531 6.4E-211 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria UP17_15405 aef6d73ed65c604923fd3519a1b3c368 236 Pfam PF01209 ubiE/COQ5 methyltransferase family 2 233 1.7E-97 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 UP17_15405 aef6d73ed65c604923fd3519a1b3c368 236 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 6.9E-78 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 UP17_15405 aef6d73ed65c604923fd3519a1b3c368 236 SUPERFAMILY SSF53335 3 233 1.22E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_15405 aef6d73ed65c604923fd3519a1b3c368 236 Gene3D G3DSA:3.40.50.150 16 234 1.2E-62 T 11-10-2018 UP17_15405 aef6d73ed65c604923fd3519a1b3c368 236 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 UP17_15405 aef6d73ed65c604923fd3519a1b3c368 236 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 233 34.539 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 UP17_15405 aef6d73ed65c604923fd3519a1b3c368 236 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 233 8.5E-131 T 11-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 UP17_25235 2d0958920fa76c844841604686978062 272 Pfam PF06445 GyrI-like small molecule binding domain 196 271 7.9E-9 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain UP17_25235 2d0958920fa76c844841604686978062 272 Gene3D G3DSA:1.10.1660.10 3 113 5.8E-29 T 11-10-2018 UP17_25235 2d0958920fa76c844841604686978062 272 SUPERFAMILY SSF46955 5 109 8.42E-28 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_25235 2d0958920fa76c844841604686978062 272 SMART SM00422 5 75 4.5E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_25235 2d0958920fa76c844841604686978062 272 Gene3D G3DSA:3.20.80.10 121 271 8.2E-23 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_25235 2d0958920fa76c844841604686978062 272 Pfam PF13411 MerR HTH family regulatory protein 5 73 1.2E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_25235 2d0958920fa76c844841604686978062 272 SMART SM00871 122 271 0.0044 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding UP17_25235 2d0958920fa76c844841604686978062 272 SUPERFAMILY SSF55136 123 270 3.14E-35 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_02070 058ac4d7f26a6f660c3983b72d1db4c9 303 Gene3D G3DSA:3.40.50.10330 1 129 2.5E-47 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 UP17_02070 058ac4d7f26a6f660c3983b72d1db4c9 303 SUPERFAMILY SSF111331 1 295 4.91E-85 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily UP17_02070 058ac4d7f26a6f660c3983b72d1db4c9 303 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 127 4.3E-37 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 UP17_02070 058ac4d7f26a6f660c3983b72d1db4c9 303 Gene3D G3DSA:2.60.200.40 130 283 1.7E-43 T 11-10-2018 UP17_02070 058ac4d7f26a6f660c3983b72d1db4c9 303 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 1.3E-110 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase UP17_02070 058ac4d7f26a6f660c3983b72d1db4c9 303 SMART SM00046 3 131 9.2E-16 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 UP17_24870 6fc9250115bb504d1aa1c9d0ef96ded1 159 Gene3D G3DSA:3.40.1280.10 1 159 1.8E-66 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UP17_24870 6fc9250115bb504d1aa1c9d0ef96ded1 159 PIRSF PIRSF004505 1 159 9.6E-55 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 UP17_24870 6fc9250115bb504d1aa1c9d0ef96ded1 159 SUPERFAMILY SSF75217 1 157 5.69E-62 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases UP17_24870 6fc9250115bb504d1aa1c9d0ef96ded1 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 31.339 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 UP17_24870 6fc9250115bb504d1aa1c9d0ef96ded1 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 2.2E-67 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 UP17_24870 6fc9250115bb504d1aa1c9d0ef96ded1 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 1.4E-60 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 UP17_17140 d362c9f9a118a223e31f91947b3c14fc 312 SUPERFAMILY SSF53795 116 176 1.37E-13 T 11-10-2018 UP17_17140 d362c9f9a118a223e31f91947b3c14fc 312 Gene3D G3DSA:3.40.50.300 115 192 1.1E-9 T 11-10-2018 UP17_18965 332a68e91b71bc6e1aeeb61d9f4e575b 147 Pfam PF01521 Iron-sulphur cluster biosynthesis 53 144 1.5E-10 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 UP17_18965 332a68e91b71bc6e1aeeb61d9f4e575b 147 SUPERFAMILY SSF89360 52 140 1.7E-15 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_18965 332a68e91b71bc6e1aeeb61d9f4e575b 147 Gene3D G3DSA:2.60.300.12 51 141 3.8E-15 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 Gene3D G3DSA:1.10.10.10 1 50 1.7E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.7E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 SMART SM00344 3 109 6.1E-44 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 Pfam PF01037 Lrp/AsnC ligand binding domain 70 136 4.4E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 SUPERFAMILY SSF46785 2 63 1.78E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 Gene3D G3DSA:3.30.70.920 52 141 4.6E-25 T 11-10-2018 UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.1E-15 T 11-10-2018 UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 SUPERFAMILY SSF54909 65 137 1.61E-16 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_05255 7fe65ad8b07298739ebc745b9cf7d543 142 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site UP17_01740 ca0487328fe94e61014fb4f852a067fc 457 Pfam PF00144 Beta-lactamase 66 421 6.7E-70 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_01740 ca0487328fe94e61014fb4f852a067fc 457 SUPERFAMILY SSF56601 59 426 4.8E-80 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_01740 ca0487328fe94e61014fb4f852a067fc 457 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 1 454 65.114 T 11-10-2018 IPR022849 Peptidase S12, UPF0214, YfeW-type UP17_01740 ca0487328fe94e61014fb4f852a067fc 457 Gene3D G3DSA:3.40.710.10 46 429 5.4E-86 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 Gene3D G3DSA:1.20.1720.10 13 222 1.5E-49 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 161 185 4.7E-9 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 4.7E-9 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 4.7E-9 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 4.7E-9 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 4.7E-9 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 Pfam PF07690 Major Facilitator Superfamily 17 410 1.6E-56 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 501 1.6E-91 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 Gene3D G3DSA:1.20.1250.20 260 509 2.8E-19 T 11-10-2018 UP17_04600 91ce1d65c20193865ad11166be7110c7 521 SUPERFAMILY SSF103473 11 515 3.53E-76 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_11460 c001f6ff093a7a641a9707d7dc1a9c60 171 SUPERFAMILY SSF109854 3 152 1.36E-28 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_11460 c001f6ff093a7a641a9707d7dc1a9c60 171 Pfam PF05163 DinB family 3 160 1.6E-25 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB UP17_11460 c001f6ff093a7a641a9707d7dc1a9c60 171 Gene3D G3DSA:1.20.120.450 1 165 4.9E-39 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_24575 b31df1864b7ab2434974306305878fdf 321 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 7 274 5.2E-79 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UP17_24575 b31df1864b7ab2434974306305878fdf 321 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 321 94.381 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UP17_24575 b31df1864b7ab2434974306305878fdf 321 Pfam PF03186 CobD/Cbib protein 10 296 1.7E-103 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UP17_22825 0c1103d467d60873d1a5913884ff0052 391 Gene3D G3DSA:3.90.1150.10 14 386 1.6E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_22825 0c1103d467d60873d1a5913884ff0052 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 390 7.5E-150 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 UP17_22825 0c1103d467d60873d1a5913884ff0052 391 Pfam PF00155 Aminotransferase class I and II 70 386 3.7E-41 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_22825 0c1103d467d60873d1a5913884ff0052 391 SUPERFAMILY SSF53383 5 387 6.78E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_22825 0c1103d467d60873d1a5913884ff0052 391 Gene3D G3DSA:3.40.640.10 71 294 1.6E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 Gene3D G3DSA:1.20.210.10 30 561 1.4E-194 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 500 3.0E-142 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 4.5E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 SUPERFAMILY SSF81442 43 554 3.01E-172 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14240 637920194cd0c4998de28423b3a6ff06 651 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 644 0.0 T 11-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 SUPERFAMILY SSF55874 4 213 2.23E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_08245 3d2c430794d2053039f9116c239cc33e 646 SMART SM01340 208 326 2.9E-53 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 SUPERFAMILY SSF118116 456 644 9.55E-54 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 4.5E-37 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 642 27.568 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 SUPERFAMILY SSF54211 190 326 1.02E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Gene3D G3DSA:3.30.565.10 1 212 1.3E-59 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Gene3D G3DSA:2.30.42.20 461 644 7.4E-64 T 11-10-2018 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Gene3D G3DSA:3.30.1370.100 502 595 7.4E-64 T 11-10-2018 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 84 3.0E-10 T 11-10-2018 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Pfam PF08676 MutL C terminal dimerisation domain 461 602 7.9E-46 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 SMART SM00853 460 602 3.8E-51 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 1.5E-96 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 UP17_08245 3d2c430794d2053039f9116c239cc33e 646 Gene3D G3DSA:3.30.230.10 213 325 2.5E-32 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_02265 e1c11bbaa30371a1f2b06b2c482d5ef6 273 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 2 271 27.728 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 UP17_02265 e1c11bbaa30371a1f2b06b2c482d5ef6 273 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 10 271 3.6E-65 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 UP17_02265 e1c11bbaa30371a1f2b06b2c482d5ef6 273 Pfam PF13847 Methyltransferase domain 43 163 7.8E-19 T 11-10-2018 IPR025714 Methyltransferase domain UP17_02265 e1c11bbaa30371a1f2b06b2c482d5ef6 273 Gene3D G3DSA:3.40.50.150 4 235 1.9E-40 T 11-10-2018 UP17_02265 e1c11bbaa30371a1f2b06b2c482d5ef6 273 SUPERFAMILY SSF53335 10 189 1.06E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_10900 310af3adc2664f76a364bf587082f92b 271 Gene3D G3DSA:3.30.450.40 82 259 5.0E-50 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_10900 310af3adc2664f76a364bf587082f92b 271 Gene3D G3DSA:1.10.10.10 1 81 4.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10900 310af3adc2664f76a364bf587082f92b 271 SUPERFAMILY SSF46785 14 87 6.07E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10900 310af3adc2664f76a364bf587082f92b 271 SMART SM00346 13 103 8.5E-29 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_10900 310af3adc2664f76a364bf587082f92b 271 Pfam PF01614 Bacterial transcriptional regulator 133 255 2.6E-32 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal UP17_10900 310af3adc2664f76a364bf587082f92b 271 SUPERFAMILY SSF55781 79 260 3.92E-46 T 11-10-2018 UP17_10900 310af3adc2664f76a364bf587082f92b 271 Pfam PF09339 IclR helix-turn-helix domain 15 65 5.9E-13 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 Gene3D G3DSA:3.40.710.10 25 298 4.4E-87 T 11-10-2018 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 SUPERFAMILY SSF69189 290 387 2.75E-15 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 SMART SM00936 298 406 7.8E-18 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 SUPERFAMILY SSF56601 3 296 2.31E-74 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 147 160 9.2E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 120 137 9.2E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 9.2E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 298 406 5.1E-17 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 28 277 8.6E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 UP17_00075 d50e8a02fbf714609c7936c6134ad3d9 436 Gene3D G3DSA:2.60.410.10 299 406 3.4E-19 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_08790 a13d657702282b67a6530e7f4b0d3275 449 Pfam PF05525 Branched-chain amino acid transport protein 10 430 4.9E-160 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_08790 a13d657702282b67a6530e7f4b0d3275 449 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 421 1.5E-153 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 SUPERFAMILY SSF46785 4 142 5.71E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 Gene3D G3DSA:1.10.10.10 2 145 1.8E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 2.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 2.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 2.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 2.1E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 SMART SM00347 21 121 9.5E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_03210 a999ba4080b12eb18e73192ad7de1549 150 Pfam PF01047 MarR family 28 85 9.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_06020 9f54ce4a8ac6c99837a50263c07117c5 605 SUPERFAMILY SSF55486 61 604 5.63E-142 T 11-10-2018 UP17_06020 9f54ce4a8ac6c99837a50263c07117c5 605 Gene3D G3DSA:1.20.140.70 30 185 1.4E-53 T 11-10-2018 UP17_06020 9f54ce4a8ac6c99837a50263c07117c5 605 Pfam PF08439 Oligopeptidase F 120 189 1.1E-24 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain UP17_06020 9f54ce4a8ac6c99837a50263c07117c5 605 Gene3D G3DSA:1.10.1370.20 234 605 2.3E-147 T 11-10-2018 UP17_06020 9f54ce4a8ac6c99837a50263c07117c5 605 Pfam PF01432 Peptidase family M3 210 590 1.2E-86 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 UP17_06020 9f54ce4a8ac6c99837a50263c07117c5 605 Gene3D G3DSA:1.10.287.830 187 233 9.6E-22 T 11-10-2018 UP17_06020 9f54ce4a8ac6c99837a50263c07117c5 605 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 13 601 2.6E-219 T 11-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 Gene3D G3DSA:1.10.8.280 680 794 2.7E-13 T 11-10-2018 UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 Pfam PF00005 ABC transporter 340 488 8.1E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 Gene3D G3DSA:1.20.1580.10 655 843 2.7E-13 T 11-10-2018 UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 SMART SM00382 343 538 0.13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 SMART SM00382 20 294 0.26 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 Gene3D G3DSA:3.40.50.300 8 306 9.2E-49 T 11-10-2018 UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 Gene3D G3DSA:1.20.1580.10 120 150 9.2E-49 T 11-10-2018 UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 SUPERFAMILY SSF52540 338 534 8.77E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 Gene3D G3DSA:3.40.50.300 331 406 2.2E-9 T 11-10-2018 UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 SUPERFAMILY SSF52540 10 300 4.69E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20120 91bcf056c4d80eda6186e63169c53004 1056 Gene3D G3DSA:3.40.50.300 410 535 1.8E-26 T 11-10-2018 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 Gene3D G3DSA:2.40.10.10 73 192 1.1E-25 T 11-10-2018 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 SUPERFAMILY SSF50156 299 408 6.31E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 SMART SM00228 313 399 1.1E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 Pfam PF13180 PDZ domain 313 408 5.3E-20 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 Gene3D G3DSA:2.30.42.10 313 411 1.9E-24 T 11-10-2018 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 SUPERFAMILY SSF50494 88 309 6.56E-55 T 11-10-2018 IPR009003 Peptidase S1, PA clan UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 Gene3D G3DSA:2.40.10.10 196 312 5.9E-41 T 11-10-2018 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 Pfam PF13365 Trypsin-like peptidase domain 131 275 3.4E-30 T 11-10-2018 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 PRINTS PR00834 HtrA/DegQ protease family signature 164 184 1.0E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 PRINTS PR00834 HtrA/DegQ protease family signature 205 229 1.0E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 PRINTS PR00834 HtrA/DegQ protease family signature 268 285 1.0E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 PRINTS PR00834 HtrA/DegQ protease family signature 246 263 1.0E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 PRINTS PR00834 HtrA/DegQ protease family signature 356 368 1.0E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_02380 e505ec2d531b07844f579b6e1ef2f6e8 411 PRINTS PR00834 HtrA/DegQ protease family signature 143 155 1.0E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_12045 5bf3dce0fad57674064341a0cbc4a28c 431 SUPERFAMILY SSF54862 13 131 1.59E-17 T 11-10-2018 UP17_12045 5bf3dce0fad57674064341a0cbc4a28c 431 Pfam PF02754 Cysteine-rich domain 189 271 3.7E-17 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_12045 5bf3dce0fad57674064341a0cbc4a28c 431 Pfam PF02754 Cysteine-rich domain 318 402 1.9E-14 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_12045 5bf3dce0fad57674064341a0cbc4a28c 431 Gene3D G3DSA:1.10.1060.10 6 95 5.4E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_12045 5bf3dce0fad57674064341a0cbc4a28c 431 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_12045 5bf3dce0fad57674064341a0cbc4a28c 431 PIRSF PIRSF000139 4 431 4.3E-126 T 11-10-2018 UP17_12045 5bf3dce0fad57674064341a0cbc4a28c 431 Pfam PF13183 4Fe-4S dicluster domain 14 81 4.8E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_06305 5777ab7d6e255b61d57251d0ea1a0bc0 546 Gene3D G3DSA:3.30.750.24 423 542 1.0E-25 T 11-10-2018 IPR036513 STAS domain superfamily UP17_06305 5777ab7d6e255b61d57251d0ea1a0bc0 546 Pfam PF00916 Sulfate permease family 15 378 8.3E-97 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 UP17_06305 5777ab7d6e255b61d57251d0ea1a0bc0 546 Pfam PF01740 STAS domain 432 530 6.5E-16 T 11-10-2018 IPR002645 STAS domain UP17_06305 5777ab7d6e255b61d57251d0ea1a0bc0 546 SUPERFAMILY SSF52091 431 534 4.71E-18 T 11-10-2018 IPR036513 STAS domain superfamily UP17_06305 5777ab7d6e255b61d57251d0ea1a0bc0 546 ProSitePatterns PS01130 SLC26A transporters signature. 44 65 - T 11-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00145 Argininosuccinate lyase family signature 149 169 3.6E-26 T 11-10-2018 UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00145 Argininosuccinate lyase family signature 238 262 3.6E-26 T 11-10-2018 UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00145 Argininosuccinate lyase family signature 282 298 3.6E-26 T 11-10-2018 UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00145 Argininosuccinate lyase family signature 108 130 3.6E-26 T 11-10-2018 UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00145 Argininosuccinate lyase family signature 200 216 3.6E-26 T 11-10-2018 UP17_03400 3e33502db323106346eb06f7715aa913 494 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 468 29.686 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_03400 3e33502db323106346eb06f7715aa913 494 Gene3D G3DSA:1.10.275.10 43 236 2.1E-126 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal UP17_03400 3e33502db323106346eb06f7715aa913 494 SUPERFAMILY SSF48557 35 470 1.05E-98 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 UP17_03400 3e33502db323106346eb06f7715aa913 494 Pfam PF00206 Lyase 56 307 9.4E-45 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal UP17_03400 3e33502db323106346eb06f7715aa913 494 Pfam PF14698 Argininosuccinate lyase C-terminal 373 446 3.5E-12 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 7.8E-13 T 11-10-2018 IPR000362 Fumarate lyase family UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 7.8E-13 T 11-10-2018 IPR000362 Fumarate lyase family UP17_03400 3e33502db323106346eb06f7715aa913 494 PRINTS PR00149 Fumarate lyase superfamily signature 282 298 7.8E-13 T 11-10-2018 IPR000362 Fumarate lyase family UP17_03400 3e33502db323106346eb06f7715aa913 494 Gene3D G3DSA:1.10.40.30 368 447 2.1E-126 T 11-10-2018 UP17_03400 3e33502db323106346eb06f7715aa913 494 Gene3D G3DSA:1.20.200.10 126 463 2.1E-126 T 11-10-2018 UP17_03400 3e33502db323106346eb06f7715aa913 494 TIGRFAM TIGR00838 argH: argininosuccinate lyase 41 470 5.0E-103 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 Gene3D G3DSA:3.40.50.2300 159 288 2.6E-63 T 11-10-2018 UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 Gene3D G3DSA:1.10.260.40 4 59 2.8E-21 T 11-10-2018 UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 SMART SM00354 1 71 1.8E-31 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.7E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 SUPERFAMILY SSF53822 60 329 3.08E-66 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 Gene3D G3DSA:3.40.50.2300 60 302 2.6E-63 T 11-10-2018 UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 SUPERFAMILY SSF47413 2 59 1.37E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_19695 7a1f52c62dfb645759ce775f2b44b905 329 Pfam PF13377 Periplasmic binding protein-like domain 167 329 7.1E-35 T 11-10-2018 UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 SMART SM00450 91 186 6.2E-18 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 SUPERFAMILY SSF52821 82 182 3.93E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 SUPERFAMILY SSF64307 3 75 1.03E-21 T 11-10-2018 IPR036868 TusA-like domain superfamily UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 Gene3D G3DSA:3.30.110.40 1 73 2.1E-27 T 11-10-2018 IPR036868 TusA-like domain superfamily UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 Pfam PF01206 Sulfurtransferase TusA 7 75 2.4E-20 T 11-10-2018 IPR001455 TusA-like domain UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 Pfam PF00581 Rhodanese-like domain 95 181 8.2E-15 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 11-10-2018 IPR001455 TusA-like domain UP17_09560 03daf019846b7a85b163ba3ac63530b1 190 Gene3D G3DSA:3.40.250.10 74 188 4.5E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_21270 7576cda62984cc3be4326552f567c29d 279 Gene3D G3DSA:3.40.190.10 119 227 1.6E-91 T 11-10-2018 UP17_21270 7576cda62984cc3be4326552f567c29d 279 PIRSF PIRSF002854 1 279 1.2E-99 T 11-10-2018 IPR004872 Lipoprotein NlpA family UP17_21270 7576cda62984cc3be4326552f567c29d 279 Gene3D G3DSA:3.40.190.10 39 275 1.6E-91 T 11-10-2018 UP17_21270 7576cda62984cc3be4326552f567c29d 279 SUPERFAMILY SSF53850 36 277 3.8E-77 T 11-10-2018 UP17_21270 7576cda62984cc3be4326552f567c29d 279 Pfam PF03180 NLPA lipoprotein 37 277 5.9E-82 T 11-10-2018 IPR004872 Lipoprotein NlpA family UP17_11875 f37e8fcb8aeea78d2c5fb48a4b0b5e6d 131 SUPERFAMILY SSF51230 8 127 9.42E-40 T 11-10-2018 IPR011053 Single hybrid motif UP17_11875 f37e8fcb8aeea78d2c5fb48a4b0b5e6d 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 8 129 2.3E-43 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 UP17_11875 f37e8fcb8aeea78d2c5fb48a4b0b5e6d 131 Pfam PF01597 Glycine cleavage H-protein 9 128 2.3E-43 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate UP17_11875 f37e8fcb8aeea78d2c5fb48a4b0b5e6d 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 35.612 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 UP17_11875 f37e8fcb8aeea78d2c5fb48a4b0b5e6d 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 UP17_11875 f37e8fcb8aeea78d2c5fb48a4b0b5e6d 131 Gene3D G3DSA:2.40.50.100 2 131 1.8E-49 T 11-10-2018 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 SMART SM00342 144 228 2.9E-33 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 Gene3D G3DSA:1.10.10.60 128 176 4.2E-19 T 11-10-2018 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 SUPERFAMILY SSF46689 180 230 1.1E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 Pfam PF12833 Helix-turn-helix domain 150 229 4.9E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 Gene3D G3DSA:3.40.50.2300 1 127 2.6E-28 T 11-10-2018 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 SUPERFAMILY SSF52172 1 134 4.27E-29 T 11-10-2018 IPR011006 CheY-like superfamily UP17_20660 7cdc1074183c5de5ae146c2898564734 232 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 181 224 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 Gene3D G3DSA:1.10.10.60 177 231 4.1E-20 T 11-10-2018 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 SUPERFAMILY SSF46689 129 179 1.87E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 Pfam PF00072 Response regulator receiver domain 3 114 7.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 6.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 6.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_20660 7cdc1074183c5de5ae146c2898564734 232 SMART SM00448 1 114 1.5E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 33 115 1.0E-23 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 Pfam PF00128 Alpha amylase, catalytic domain 185 256 1.5E-10 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 Gene3D G3DSA:2.60.40.1180 532 638 1.1E-32 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 Gene3D G3DSA:3.20.20.80 132 531 1.3E-153 T 11-10-2018 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 PIRSF PIRSF000463 2 645 6.3E-271 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 8 636 41.128 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 Gene3D G3DSA:2.60.40.10 7 129 3.5E-49 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 SUPERFAMILY SSF51011 533 635 1.22E-28 T 11-10-2018 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 537 634 3.3E-20 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 SUPERFAMILY SSF51445 88 526 5.76E-106 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 SMART SM00642 159 505 1.6E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 17 632 4.6E-260 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 UP17_12880 65252010f897b1cdb9ea7022ba15c124 646 SUPERFAMILY SSF81296 45 115 2.8E-11 T 11-10-2018 IPR014756 Immunoglobulin E-set UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 Gene3D G3DSA:3.90.400.10 105 174 4.3E-208 T 11-10-2018 UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 SUPERFAMILY SSF51011 481 558 1.72E-19 T 11-10-2018 UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 Pfam PF00128 Alpha amylase, catalytic domain 28 377 1.6E-127 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 SUPERFAMILY SSF51445 4 476 1.62E-164 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 SMART SM00642 13 420 3.1E-166 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 Gene3D G3DSA:3.20.20.80 5 473 4.3E-208 T 11-10-2018 UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 Pfam PF16657 Maltogenic Amylase, C-terminal domain 481 553 6.0E-11 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal UP17_23235 1189014e8d1f72f835c4e95fcf2a61e9 559 Gene3D G3DSA:2.60.40.1180 482 559 2.8E-24 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta UP17_23100 29d1df9565e6643e61e1b763c42e9ca3 365 SMART SM00471 131 267 3.3E-9 T 11-10-2018 IPR003607 HD/PDEase domain UP17_23100 29d1df9565e6643e61e1b763c42e9ca3 365 SUPERFAMILY SSF109604 121 295 7.4E-37 T 11-10-2018 UP17_23100 29d1df9565e6643e61e1b763c42e9ca3 365 Gene3D G3DSA:1.10.3210.10 4 299 1.4E-76 T 11-10-2018 UP17_23100 29d1df9565e6643e61e1b763c42e9ca3 365 Pfam PF01966 HD domain 136 257 1.1E-15 T 11-10-2018 IPR006674 HD domain UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 Gene3D G3DSA:3.30.565.10 304 466 8.9E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 SMART SM00388 242 310 1.8E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 SMART SM00387 356 466 3.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 SUPERFAMILY SSF55874 299 466 2.23E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 305 3.4E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 1.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 466 1.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 1.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 1.3E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 SUPERFAMILY SSF47384 227 310 5.3E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 Gene3D G3DSA:1.10.287.130 183 303 1.1E-16 T 11-10-2018 UP17_03575 cdd40b47c2cd39f1345bd57872921c3f 466 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 465 3.7E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_07185 567c9012afb5f0dd375a347dbc26452f 91 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 4.4E-30 T 11-10-2018 IPR016979 Protein of unknown function DUF2129 UP17_07185 567c9012afb5f0dd375a347dbc26452f 91 Hamap MF_01126 UPF0298 protein . 1 78 22.705 T 11-10-2018 IPR016979 Protein of unknown function DUF2129 UP17_07185 567c9012afb5f0dd375a347dbc26452f 91 PIRSF PIRSF031653 1 91 1.7E-35 T 11-10-2018 IPR016979 Protein of unknown function DUF2129 UP17_23990 7ed57cc8f956ddc42cdc99c3a6879b5d 538 Gene3D G3DSA:3.10.105.10 295 512 1.8E-176 T 11-10-2018 UP17_23990 7ed57cc8f956ddc42cdc99c3a6879b5d 538 SUPERFAMILY SSF53850 37 533 4.81E-158 T 11-10-2018 UP17_23990 7ed57cc8f956ddc42cdc99c3a6879b5d 538 PIRSF PIRSF002741 1 538 1.3E-150 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 UP17_23990 7ed57cc8f956ddc42cdc99c3a6879b5d 538 Gene3D G3DSA:3.90.76.10 58 212 1.8E-176 T 11-10-2018 UP17_23990 7ed57cc8f956ddc42cdc99c3a6879b5d 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 457 9.7E-113 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain UP17_23990 7ed57cc8f956ddc42cdc99c3a6879b5d 538 Gene3D G3DSA:3.40.190.10 213 525 1.8E-176 T 11-10-2018 UP17_14450 fc463f472a148ec30b7d13346bfca4b6 302 PIRSF PIRSF000450 1 302 4.8E-149 T 11-10-2018 IPR033752 MetA family UP17_14450 fc463f472a148ec30b7d13346bfca4b6 302 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 1.4E-133 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 UP17_14450 fc463f472a148ec30b7d13346bfca4b6 302 Gene3D G3DSA:3.40.50.880 1 301 7.3E-129 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_14450 fc463f472a148ec30b7d13346bfca4b6 302 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 42.718 T 11-10-2018 IPR033752 MetA family UP17_14450 fc463f472a148ec30b7d13346bfca4b6 302 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.6E-139 T 11-10-2018 IPR033752 MetA family UP17_14450 fc463f472a148ec30b7d13346bfca4b6 302 SUPERFAMILY SSF52317 17 297 2.4E-99 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_14450 fc463f472a148ec30b7d13346bfca4b6 302 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 4.0E-113 T 11-10-2018 UP17_23875 f0bf6465600c099d190944e9760dbae4 132 Gene3D G3DSA:3.40.50.620 1 127 2.0E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_23875 f0bf6465600c099d190944e9760dbae4 132 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 2.0E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_23875 f0bf6465600c099d190944e9760dbae4 132 Pfam PF01467 Cytidylyltransferase-like 5 118 5.6E-22 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_23875 f0bf6465600c099d190944e9760dbae4 132 SUPERFAMILY SSF52374 1 124 2.2E-32 T 11-10-2018 UP17_23875 f0bf6465600c099d190944e9760dbae4 132 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 5.9E-60 T 11-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 25.716 T 11-10-2018 IPR023635 Peptide deformylase UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 SUPERFAMILY SSF56420 2 178 7.07E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 Gene3D G3DSA:3.90.45.10 1 184 3.2E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 PIRSF PIRSF004749 2 183 1.1E-46 T 11-10-2018 IPR023635 Peptide deformylase UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 Pfam PF01327 Polypeptide deformylase 5 171 2.0E-45 T 11-10-2018 IPR023635 Peptide deformylase UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 8 178 2.6E-44 T 11-10-2018 IPR023635 Peptide deformylase UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 PRINTS PR01576 Peptide deformylase signature 140 169 3.8E-27 T 11-10-2018 IPR023635 Peptide deformylase UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 PRINTS PR01576 Peptide deformylase signature 121 139 3.8E-27 T 11-10-2018 IPR023635 Peptide deformylase UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 PRINTS PR01576 Peptide deformylase signature 108 119 3.8E-27 T 11-10-2018 IPR023635 Peptide deformylase UP17_06945 1e341c1133e9058e3174811f9d489eaf 184 PRINTS PR01576 Peptide deformylase signature 47 76 3.8E-27 T 11-10-2018 IPR023635 Peptide deformylase UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.0E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.0E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.0E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.0E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.0E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 SUPERFAMILY SSF51735 2 247 1.31E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03800 867b161caf7d0c99937063f96944e894 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 1.0E-66 T 11-10-2018 UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03800 867b161caf7d0c99937063f96944e894 249 Gene3D G3DSA:3.40.50.720 1 249 8.4E-79 T 11-10-2018 UP17_05425 47a62570b2246c26fdbac965bbad8c98 118 Hamap MF_01526 UPF0342 protein . 1 112 18.887 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA UP17_05425 47a62570b2246c26fdbac965bbad8c98 118 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 107 2.8E-24 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA UP17_05425 47a62570b2246c26fdbac965bbad8c98 118 Gene3D G3DSA:1.20.1500.10 1 112 8.8E-39 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily UP17_05425 47a62570b2246c26fdbac965bbad8c98 118 SUPERFAMILY SSF158622 3 112 3.53E-37 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily UP17_22915 98f93722c1597811403eb89d5065d2e1 239 Pfam PF03476 MOSC N-terminal beta barrel domain 4 64 1.6E-11 T 11-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 UP17_22915 98f93722c1597811403eb89d5065d2e1 239 Pfam PF03473 MOSC domain 121 235 1.2E-15 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 UP17_22915 98f93722c1597811403eb89d5065d2e1 239 SUPERFAMILY SSF50800 3 235 1.46E-24 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily UP17_22915 98f93722c1597811403eb89d5065d2e1 239 Gene3D G3DSA:2.40.33.20 118 239 2.0E-10 T 11-10-2018 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 Gene3D G3DSA:3.20.20.120 128 431 3.1E-138 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 3.6E-142 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 SMART SM01192 139 428 1.8E-225 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 SUPERFAMILY SSF54826 3 138 1.77E-59 T 11-10-2018 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 SMART SM01193 4 134 4.4E-99 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 Pfam PF03952 Enolase, N-terminal domain 4 134 4.5E-62 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 SUPERFAMILY SSF51604 138 429 2.97E-133 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 Gene3D G3DSA:3.30.390.10 1 127 6.1E-58 T 11-10-2018 IPR029017 Enolase-like, N-terminal UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 9.7E-217 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 PIRSF PIRSF001400 1 428 1.5E-195 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 PRINTS PR00148 Enolase signature 107 123 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 PRINTS PR00148 Enolase signature 314 325 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 PRINTS PR00148 Enolase signature 366 383 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 PRINTS PR00148 Enolase signature 337 351 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 PRINTS PR00148 Enolase signature 37 51 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 PRINTS PR00148 Enolase signature 161 174 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23455 0d0d21d0d9df0df9fe12e6f07722dbb4 431 Hamap MF_00318 Enolase [eno]. 2 414 45.953 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_17720 3d0b947dfde621c516db9356a6aeb5a2 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 UP17_17720 3d0b947dfde621c516db9356a6aeb5a2 370 Gene3D G3DSA:3.40.718.10 2 370 8.3E-153 T 11-10-2018 UP17_17720 3d0b947dfde621c516db9356a6aeb5a2 370 SUPERFAMILY SSF53659 2 356 5.76E-123 T 11-10-2018 UP17_17720 3d0b947dfde621c516db9356a6aeb5a2 370 SMART SM01329 4 352 4.9E-196 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 UP17_17720 3d0b947dfde621c516db9356a6aeb5a2 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 352 2.5E-138 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 UP17_17720 3d0b947dfde621c516db9356a6aeb5a2 370 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 351 5.5E-160 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 UP17_17720 3d0b947dfde621c516db9356a6aeb5a2 370 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 356 49.526 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 UP17_05820 f1077fa2ac17a207a6d249015f7e5c25 288 Gene3D G3DSA:3.30.1180.10 156 284 1.6E-50 T 11-10-2018 UP17_05820 f1077fa2ac17a207a6d249015f7e5c25 288 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 280 2.8E-97 T 11-10-2018 IPR003797 DegV UP17_05820 f1077fa2ac17a207a6d249015f7e5c25 288 SUPERFAMILY SSF82549 1 283 5.49E-93 T 11-10-2018 UP17_05820 f1077fa2ac17a207a6d249015f7e5c25 288 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 2.1E-87 T 11-10-2018 IPR003797 DegV UP17_05820 f1077fa2ac17a207a6d249015f7e5c25 288 Gene3D G3DSA:3.40.50.10170 1 152 1.0E-47 T 11-10-2018 UP17_24850 9407538b3e041a766e049f4c7a423644 689 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 362 370 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 Gene3D G3DSA:1.20.1370.20 443 536 9.6E-33 T 11-10-2018 UP17_24850 9407538b3e041a766e049f4c7a423644 689 Gene3D G3DSA:3.40.50.880 537 689 1.5E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_24850 9407538b3e041a766e049f4c7a423644 689 Gene3D G3DSA:2.40.180.10 1 442 2.7E-211 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UP17_24850 9407538b3e041a766e049f4c7a423644 689 Pfam PF06628 Catalase-related immune-responsive 447 509 7.1E-22 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 ProSitePatterns PS00438 Catalase proximal active site signature. 68 84 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 Pfam PF00199 Catalase 32 416 4.9E-181 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 PRINTS PR00067 Catalase signature 317 344 2.0E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 PRINTS PR00067 Catalase signature 45 68 2.0E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 PRINTS PR00067 Catalase signature 129 146 2.0E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 PRINTS PR00067 Catalase signature 148 166 2.0E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 PRINTS PR00067 Catalase signature 108 126 2.0E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 PRINTS PR00067 Catalase signature 349 375 2.0E-70 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 SUPERFAMILY SSF52317 543 686 4.08E-20 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_24850 9407538b3e041a766e049f4c7a423644 689 PIRSF PIRSF038927 1 689 0.0 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UP17_24850 9407538b3e041a766e049f4c7a423644 689 Pfam PF01965 DJ-1/PfpI family 544 671 5.6E-14 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 UP17_24850 9407538b3e041a766e049f4c7a423644 689 SUPERFAMILY SSF56634 13 537 6.54E-223 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_24850 9407538b3e041a766e049f4c7a423644 689 SMART SM01060 32 420 1.0E-273 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_06515 4e16a7f60ca26654144404426c26af93 299 SUPERFAMILY SSF161098 88 281 3.14E-20 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06515 4e16a7f60ca26654144404426c26af93 299 Gene3D G3DSA:1.10.3720.10 83 294 6.9E-18 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06515 4e16a7f60ca26654144404426c26af93 299 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 52 1.6E-5 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain UP17_06515 4e16a7f60ca26654144404426c26af93 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 297 3.7E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_02795 744dc744cd4c84c179ec4902aaed6777 261 SUPERFAMILY SSF88713 41 250 6.67E-63 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_02795 744dc744cd4c84c179ec4902aaed6777 261 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 27 250 2.9E-105 T 11-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA UP17_02795 744dc744cd4c84c179ec4902aaed6777 261 Gene3D G3DSA:3.20.20.370 18 254 7.0E-83 T 11-10-2018 UP17_02795 744dc744cd4c84c179ec4902aaed6777 261 Pfam PF01522 Polysaccharide deacetylase 58 180 1.1E-32 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 UP17_06780 be2e779abdedffb13abfd43265ea659f 209 Pfam PF00005 ABC transporter 17 156 8.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_06780 be2e779abdedffb13abfd43265ea659f 209 SMART SM00382 22 205 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_06780 be2e779abdedffb13abfd43265ea659f 209 SUPERFAMILY SSF52540 1 201 4.89E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_06780 be2e779abdedffb13abfd43265ea659f 209 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_06780 be2e779abdedffb13abfd43265ea659f 209 Gene3D G3DSA:3.40.50.300 6 207 7.7E-54 T 11-10-2018 UP17_18330 a1dedd64b24302fa95c7d35fe5c76569 333 Gene3D G3DSA:3.90.226.10 62 275 1.5E-86 T 11-10-2018 UP17_18330 a1dedd64b24302fa95c7d35fe5c76569 333 Pfam PF01343 Peptidase family S49 130 277 1.7E-56 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 UP17_18330 a1dedd64b24302fa95c7d35fe5c76569 333 Gene3D G3DSA:3.40.1750.20 170 236 1.5E-86 T 11-10-2018 UP17_18330 a1dedd64b24302fa95c7d35fe5c76569 333 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 61 278 6.5E-83 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 UP17_18330 a1dedd64b24302fa95c7d35fe5c76569 333 SUPERFAMILY SSF52096 61 266 1.67E-44 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 Gene3D G3DSA:4.10.950.10 197 276 1.6E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 1.2E-57 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.3E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 SMART SM01383 42 118 4.3E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 SUPERFAMILY SSF50104 126 273 9.03E-62 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 SUPERFAMILY SSF50249 2 125 2.95E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 9.3E-141 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.93 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 PIRSF PIRSF002158 3 276 3.2E-99 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 SMART SM01382 124 253 3.8E-94 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 Gene3D G3DSA:2.40.50.140 1 113 5.9E-49 T 11-10-2018 UP17_00705 5e5a1e65d2fed5460093f738d9e4483f 276 Gene3D G3DSA:2.30.30.30 118 196 1.9E-35 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 UP17_15970 fe29d21fff30da3c07ef5b04812af1ad 145 Gene3D G3DSA:3.40.30.10 25 142 1.1E-54 T 11-10-2018 UP17_15970 fe29d21fff30da3c07ef5b04812af1ad 145 Pfam PF06491 Disulphide isomerase 9 142 6.1E-62 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family UP17_15970 fe29d21fff30da3c07ef5b04812af1ad 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 9 142 8.0E-63 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family UP17_25480 94bd28c759790ecd60ac7e185128beb6 181 Gene3D G3DSA:3.40.50.360 1 180 1.6E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_25480 94bd28c759790ecd60ac7e185128beb6 181 SUPERFAMILY SSF52218 1 175 2.51E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_25480 94bd28c759790ecd60ac7e185128beb6 181 Pfam PF02525 Flavodoxin-like fold 1 171 3.2E-43 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 Gene3D G3DSA:3.40.50.300 2 280 4.3E-80 T 11-10-2018 UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 2.4E-119 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 SUPERFAMILY SSF50331 239 346 3.57E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 SUPERFAMILY SSF52540 3 246 2.34E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 Pfam PF12857 TOBE-like domain 285 342 1.5E-18 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 SMART SM00382 27 214 4.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_06355 ba62fdbfac98b5768f4b57dd414ffe4f 354 Pfam PF00005 ABC transporter 18 164 1.1E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_14195 9a96f4a818bb830090118161b1471ded 485 Pfam PF01471 Putative peptidoglycan binding domain 403 450 5.7E-12 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_14195 9a96f4a818bb830090118161b1471ded 485 SUPERFAMILY SSF50156 111 203 4.54E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_14195 9a96f4a818bb830090118161b1471ded 485 SUPERFAMILY SSF47090 390 464 7.06E-16 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_14195 9a96f4a818bb830090118161b1471ded 485 SUPERFAMILY SSF52096 64 385 4.47E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_14195 9a96f4a818bb830090118161b1471ded 485 Gene3D G3DSA:1.10.101.10 391 470 3.3E-15 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_14195 9a96f4a818bb830090118161b1471ded 485 Pfam PF13180 PDZ domain 121 199 1.2E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_14195 9a96f4a818bb830090118161b1471ded 485 Gene3D G3DSA:3.30.750.44 68 356 1.6E-93 T 11-10-2018 UP17_14195 9a96f4a818bb830090118161b1471ded 485 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 72 389 8.2E-120 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 UP17_14195 9a96f4a818bb830090118161b1471ded 485 SMART SM00228 120 191 1.0E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_14195 9a96f4a818bb830090118161b1471ded 485 Gene3D G3DSA:3.90.226.10 208 378 1.6E-93 T 11-10-2018 UP17_14195 9a96f4a818bb830090118161b1471ded 485 Gene3D G3DSA:2.30.42.10 120 207 1.6E-93 T 11-10-2018 UP17_14195 9a96f4a818bb830090118161b1471ded 485 SMART SM00245 193 381 1.5E-64 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 UP17_14195 9a96f4a818bb830090118161b1471ded 485 Pfam PF03572 Peptidase family S41 219 380 9.7E-50 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 UP17_24000 8640b9030f9056c20439b04466b79529 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 4.0E-29 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_24000 8640b9030f9056c20439b04466b79529 335 SUPERFAMILY SSF52540 6 255 4.31E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24000 8640b9030f9056c20439b04466b79529 335 Pfam PF00005 ABC transporter 27 184 4.7E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_24000 8640b9030f9056c20439b04466b79529 335 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_24000 8640b9030f9056c20439b04466b79529 335 Gene3D G3DSA:3.40.50.300 4 333 5.4E-104 T 11-10-2018 UP17_24000 8640b9030f9056c20439b04466b79529 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 2.5E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_24000 8640b9030f9056c20439b04466b79529 335 SMART SM00382 35 234 7.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17930 2880b6df14a919adff9d3465296115ec 572 Gene3D G3DSA:3.20.20.140 327 572 2.8E-76 T 11-10-2018 UP17_17930 2880b6df14a919adff9d3465296115ec 572 PIRSF PIRSF005047 3 572 6.0E-239 T 11-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_17930 2880b6df14a919adff9d3465296115ec 572 SUPERFAMILY SSF89550 338 570 1.57E-56 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 UP17_17930 2880b6df14a919adff9d3465296115ec 572 SUPERFAMILY SSF81301 154 316 6.08E-44 T 11-10-2018 UP17_17930 2880b6df14a919adff9d3465296115ec 572 Pfam PF14520 Helix-hairpin-helix domain 92 145 1.8E-5 T 11-10-2018 UP17_17930 2880b6df14a919adff9d3465296115ec 572 SMART SM00481 338 417 9.5E-21 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal UP17_17930 2880b6df14a919adff9d3465296115ec 572 Gene3D G3DSA:1.10.150.110 1 84 4.0E-20 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily UP17_17930 2880b6df14a919adff9d3465296115ec 572 SUPERFAMILY SSF47802 2 80 1.27E-20 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily UP17_17930 2880b6df14a919adff9d3465296115ec 572 SMART SM00483 2 316 1.5E-74 T 11-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 UP17_17930 2880b6df14a919adff9d3465296115ec 572 SMART SM00278 90 109 130.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_17930 2880b6df14a919adff9d3465296115ec 572 SMART SM00278 50 69 26.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_17930 2880b6df14a919adff9d3465296115ec 572 SMART SM00278 125 144 22.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_17930 2880b6df14a919adff9d3465296115ec 572 Gene3D G3DSA:3.30.210.10 261 326 3.7E-18 T 11-10-2018 IPR037160 DNA polymerase, thumb domain superfamily UP17_17930 2880b6df14a919adff9d3465296115ec 572 Pfam PF14791 DNA polymerase beta thumb 255 316 3.5E-19 T 11-10-2018 IPR029398 DNA polymerase beta, thumb domain UP17_17930 2880b6df14a919adff9d3465296115ec 572 Pfam PF14716 Helix-hairpin-helix domain 6 70 5.0E-19 T 11-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain UP17_17930 2880b6df14a919adff9d3465296115ec 572 Gene3D G3DSA:3.30.460.10 154 260 2.4E-22 T 11-10-2018 UP17_17930 2880b6df14a919adff9d3465296115ec 572 Gene3D G3DSA:1.10.150.20 85 149 9.5E-19 T 11-10-2018 UP17_17930 2880b6df14a919adff9d3465296115ec 572 Pfam PF02811 PHP domain 339 420 1.8E-8 T 11-10-2018 IPR004013 PHP domain GO:0003824 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 SUPERFAMILY SSF53223 19 209 5.44E-73 T 11-10-2018 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 69 197 2.9E-50 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 215 458 3.3E-91 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 SMART SM00839 217 458 3.7E-95 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 PIRSF PIRSF000185 30 460 1.7E-122 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 Gene3D G3DSA:3.40.50.720 222 385 3.3E-168 T 11-10-2018 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 SUPERFAMILY SSF51735 215 459 1.15E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 Gene3D G3DSA:1.10.285.10 18 394 3.3E-168 T 11-10-2018 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 Gene3D G3DSA:3.40.50.10860 67 202 3.3E-168 T 11-10-2018 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 Gene3D G3DSA:1.10.285.10 395 460 5.3E-10 T 11-10-2018 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 206 228 2.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 248 268 2.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 126 140 2.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_24790 6292564bfa620904d1f08f5ed89d4888 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 384 395 2.9E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 390 405 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 561 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 SUPERFAMILY SSF52374 1 639 1.64E-156 T 11-10-2018 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 SUPERFAMILY SSF47323 643 917 5.05E-79 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 Pfam PF06827 Zinc finger found in FPG and IleRS 885 914 1.7E-9 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 Gene3D G3DSA:3.40.50.620 24 620 2.2E-262 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 SUPERFAMILY SSF50677 202 392 1.05E-61 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 21.061 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 831 0.0 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 Gene3D G3DSA:1.10.730.20 631 918 6.9E-101 T 11-10-2018 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 Pfam PF08264 Anticodon-binding domain of tRNA 676 830 3.4E-27 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 632 1.6E-219 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_07405 d048ddaae1ed1c695977caabbb60d7af 922 Gene3D G3DSA:3.90.740.10 193 397 2.2E-262 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 UP17_18620 c2081af12d1dde19a9a0e42cbf9bf65c 136 Pfam PF13273 Protein of unknown function (DUF4064) 2 108 6.4E-15 T 11-10-2018 IPR025273 Domain of unknown function DUF4064 UP17_13490 5f0ed2ed4db380768cedd4f980946bc5 83 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 1 47 4.0E-13 T 11-10-2018 IPR005370 Uncharacterised protein family UPF0180 UP17_13490 5f0ed2ed4db380768cedd4f980946bc5 83 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 78 4.8E-30 T 11-10-2018 IPR005370 Uncharacterised protein family UPF0180 UP17_13490 5f0ed2ed4db380768cedd4f980946bc5 83 Hamap MF_00506 UPF0180 protein . 1 79 25.835 T 11-10-2018 IPR005370 Uncharacterised protein family UPF0180 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 SMART SM00387 298 409 2.9E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 187 252 1.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 407 2.0E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 6.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 6.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 387 6.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 406 6.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 SUPERFAMILY SSF55874 242 407 7.33E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 SMART SM00388 186 253 6.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 Gene3D G3DSA:3.30.565.10 263 412 2.9E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 SUPERFAMILY SSF47384 180 254 3.53E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_24720 5bb20f3ea2fa808a71ce10ae0e2cc701 412 Gene3D G3DSA:1.10.287.130 175 255 5.4E-17 T 11-10-2018 UP17_04125 e680cda4c0581eb48dfe1a753344f76b 121 SUPERFAMILY SSF69118 6 117 2.22E-28 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 UP17_04125 e680cda4c0581eb48dfe1a753344f76b 121 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 45 95 4.9E-9 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 UP17_04125 e680cda4c0581eb48dfe1a753344f76b 121 Pfam PF02627 Carboxymuconolactone decarboxylase family 28 110 1.1E-19 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 UP17_04125 e680cda4c0581eb48dfe1a753344f76b 121 Gene3D G3DSA:1.20.1290.10 2 117 2.6E-29 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 Gene3D G3DSA:1.10.10.10 2 55 4.4E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 SMART SM01134 75 241 7.2E-61 T 11-10-2018 UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 Pfam PF00455 DeoR C terminal sensor domain 77 239 1.4E-44 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 3.6E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 3.6E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 SUPERFAMILY SSF100950 77 239 1.05E-30 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 SUPERFAMILY SSF46785 6 65 2.45E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 Pfam PF08220 DeoR-like helix-turn-helix domain 8 59 1.0E-19 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_10320 ad536f98b6380609ee6ad4b3291a439a 260 SMART SM00420 8 60 4.2E-22 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_00570 a9e0c5523cdb5b3f2527cd4d019be60b 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 4.6E-72 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 UP17_00570 a9e0c5523cdb5b3f2527cd4d019be60b 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 UP17_00570 a9e0c5523cdb5b3f2527cd4d019be60b 159 SUPERFAMILY SSF69765 1 157 2.62E-67 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 UP17_00570 a9e0c5523cdb5b3f2527cd4d019be60b 159 Gene3D G3DSA:3.30.1330.50 1 159 4.9E-69 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 UP17_00570 a9e0c5523cdb5b3f2527cd4d019be60b 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.951 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 UP17_00570 a9e0c5523cdb5b3f2527cd4d019be60b 159 Pfam PF02542 YgbB family 2 155 1.6E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 3.4E-21 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 1.0E-7 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 Gene3D G3DSA:1.20.5.1150 16 56 1.1E-17 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.466 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_16735 ed933f2174a72e270b309daca64b0bdc 57 Pfam PF01165 Ribosomal protein S21 5 57 6.8E-21 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_20020 00c1a416c9ec8f0767e5ba1c31d6c644 476 Gene3D G3DSA:3.30.565.10 8 176 3.7E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20020 00c1a416c9ec8f0767e5ba1c31d6c644 476 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 159 3.5E-34 T 11-10-2018 UP17_20020 00c1a416c9ec8f0767e5ba1c31d6c644 476 SUPERFAMILY SSF55874 14 165 4.52E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 2.2E-69 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 Gene3D G3DSA:3.30.300.10 13 284 4.7E-180 T 11-10-2018 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 Gene3D G3DSA:3.30.300.10 104 389 4.7E-180 T 11-10-2018 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 SUPERFAMILY SSF55973 125 246 1.81E-52 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 58.664 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 Gene3D G3DSA:3.30.300.10 7 247 4.7E-180 T 11-10-2018 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 2.3E-43 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 SUPERFAMILY SSF55973 5 111 1.18E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 3.7E-50 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 4.7E-186 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 PIRSF PIRSF000497 1 397 8.3E-178 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_22035 3db0b0370fc776cc382eeaa6e6c17298 397 SUPERFAMILY SSF55973 247 395 8.24E-70 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 UP17_24055 05933dae91bb1d0e3726ed7b511cdc90 325 Gene3D G3DSA:2.70.70.10 72 229 8.2E-48 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_24055 05933dae91bb1d0e3726ed7b511cdc90 325 Pfam PF01551 Peptidase family M23 115 213 2.6E-23 T 11-10-2018 IPR016047 Peptidase M23 UP17_24055 05933dae91bb1d0e3726ed7b511cdc90 325 SUPERFAMILY SSF51261 108 216 3.5E-26 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_05200 a257f901cb4920ee292b158e689b09e1 391 Gene3D G3DSA:3.20.20.140 58 343 1.4E-151 T 11-10-2018 UP17_05200 a257f901cb4920ee292b158e689b09e1 391 Gene3D G3DSA:2.30.40.10 4 390 1.4E-151 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_05200 a257f901cb4920ee292b158e689b09e1 391 SUPERFAMILY SSF51556 57 347 1.28E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_05200 a257f901cb4920ee292b158e689b09e1 391 PIRSF PIRSF001238 1 391 1.1E-164 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 UP17_05200 a257f901cb4920ee292b158e689b09e1 391 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 390 3.6E-173 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 UP17_05200 a257f901cb4920ee292b158e689b09e1 391 SUPERFAMILY SSF51338 1 390 8.27E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_05200 a257f901cb4920ee292b158e689b09e1 391 Pfam PF01979 Amidohydrolase family 53 375 4.4E-21 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 SUPERFAMILY SSF48179 185 336 3.74E-60 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 Gene3D G3DSA:3.40.50.720 1 192 1.2E-64 T 11-10-2018 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 193 214 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 327 38.847 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 SUPERFAMILY SSF51735 8 183 5.33E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 185 325 3.6E-56 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 Gene3D G3DSA:1.10.1040.10 194 340 5.5E-55 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 203 227 3.5E-47 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 3.5E-47 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 3.5E-47 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 3.5E-47 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 138 158 3.5E-47 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 178 202 3.5E-47 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 PIRSF PIRSF000114 1 337 1.3E-114 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_15475 075d8eea961d8d4c0a71c3067f1b47c5 350 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 165 1.3E-52 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Pfam PF00672 HAMP domain 207 256 1.5E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SUPERFAMILY SSF47384 365 446 6.67E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Gene3D G3DSA:1.10.8.500 206 254 3.0E-7 T 11-10-2018 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SUPERFAMILY SSF103190 88 182 9.02E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Gene3D G3DSA:3.30.450.20 255 374 6.7E-23 T 11-10-2018 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SUPERFAMILY SSF55874 435 603 2.49E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Gene3D G3DSA:1.10.287.130 375 450 2.7E-29 T 11-10-2018 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Gene3D G3DSA:3.30.565.10 453 610 4.8E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SUPERFAMILY SSF158472 207 256 1.57E-9 T 11-10-2018 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SUPERFAMILY SSF55785 255 371 3.62E-11 T 11-10-2018 IPR035965 PAS domain superfamily UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SMART SM00304 207 259 6.1E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SMART SM00091 266 332 1.2E-8 T 11-10-2018 IPR000014 PAS domain UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Gene3D G3DSA:3.30.450.20 32 185 6.9E-40 T 11-10-2018 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 266 379 8.4E-6 T 11-10-2018 IPR000014 PAS domain UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Pfam PF00989 PAS fold 268 370 8.6E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 602 3.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SMART SM00387 491 603 9.5E-42 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 SMART SM00388 379 446 2.7E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_24895 6ce1d919307f3d50f751c751f30bde24 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 380 445 9.6E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_14140 21733009906c7705c345ae24b0d7f09b 308 SUPERFAMILY SSF90002 219 301 6.54E-10 T 11-10-2018 UP17_14140 21733009906c7705c345ae24b0d7f09b 308 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 220 301 4.5E-11 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal UP17_14140 21733009906c7705c345ae24b0d7f09b 308 SMART SM00833 218 303 7.9E-9 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal UP17_14140 21733009906c7705c345ae24b0d7f09b 308 Gene3D G3DSA:3.40.50.300 1 199 2.6E-49 T 11-10-2018 UP17_14140 21733009906c7705c345ae24b0d7f09b 308 SUPERFAMILY SSF52540 5 188 1.09E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_14140 21733009906c7705c345ae24b0d7f09b 308 Gene3D G3DSA:3.30.1220.10 200 304 2.4E-5 T 11-10-2018 IPR036627 CobW-like, C-terminal domain superfamily UP17_14140 21733009906c7705c345ae24b0d7f09b 308 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 181 2.2E-43 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 SUPERFAMILY SSF55068 3 170 1.23E-66 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 Gene3D G3DSA:2.170.150.20 172 318 3.2E-58 T 11-10-2018 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 Pfam PF01641 SelR domain 182 300 3.2E-48 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 171 301 37.066 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 4.3E-57 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 178 309 6.1E-62 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 6 165 34.402 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 Gene3D G3DSA:3.30.1060.10 1 170 9.3E-62 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 158 8.3E-58 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_24710 3b4bc5c849dc25e8956f3db900e864bd 319 SUPERFAMILY SSF51316 177 316 6.8E-59 T 11-10-2018 IPR011057 Mss4-like superfamily UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 Gene3D G3DSA:3.20.20.60 237 570 2.5E-127 T 11-10-2018 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 Pfam PF05524 PEP-utilising enzyme, N-terminal 7 127 2.9E-32 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 SUPERFAMILY SSF51621 250 549 5.03E-115 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 448 466 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 564 2.8E-256 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 SUPERFAMILY SSF52009 126 246 5.76E-38 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 Pfam PF00391 PEP-utilising enzyme, mobile domain 154 226 8.0E-24 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 PIRSF PIRSF000732 1 572 1.6E-228 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 Gene3D G3DSA:3.50.30.10 7 236 3.5E-81 T 11-10-2018 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 Gene3D G3DSA:1.10.274.10 24 147 3.5E-81 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 185 196 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 2.9E-32 T 11-10-2018 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 448 463 2.9E-32 T 11-10-2018 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 501 513 2.9E-32 T 11-10-2018 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 2.9E-32 T 11-10-2018 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 2.1E-129 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 UP17_06795 67038c4c9d0399de7a90a1d6a14373e2 572 SUPERFAMILY SSF47831 24 144 6.54E-37 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 UP17_07565 fa5821a233c5969df899f006ec89f34e 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 8.7E-36 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 UP17_10230 2600b960c52b3c4f8073da354655c658 164 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 4 162 2.0E-51 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_10230 2600b960c52b3c4f8073da354655c658 164 Pfam PF00364 Biotin-requiring enzyme 88 159 1.6E-23 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_10230 2600b960c52b3c4f8073da354655c658 164 Gene3D G3DSA:2.40.50.100 84 161 6.0E-30 T 11-10-2018 UP17_10230 2600b960c52b3c4f8073da354655c658 164 SUPERFAMILY SSF51230 86 161 7.2E-24 T 11-10-2018 IPR011053 Single hybrid motif UP17_10230 2600b960c52b3c4f8073da354655c658 164 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 118 135 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_10230 2600b960c52b3c4f8073da354655c658 164 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 123 136 4.4E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_10230 2600b960c52b3c4f8073da354655c658 164 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 91 104 4.4E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_10230 2600b960c52b3c4f8073da354655c658 164 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 108 122 4.4E-17 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_17210 49bb3f956f41d2148153cc877cff8e0e 346 SUPERFAMILY SSF53756 4 343 8.37E-57 T 11-10-2018 UP17_17210 49bb3f956f41d2148153cc877cff8e0e 346 Gene3D G3DSA:3.40.50.2000 156 326 8.1E-50 T 11-10-2018 UP17_17210 49bb3f956f41d2148153cc877cff8e0e 346 Pfam PF00534 Glycosyl transferases group 1 173 322 2.1E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_17210 49bb3f956f41d2148153cc877cff8e0e 346 Gene3D G3DSA:3.40.50.2000 38 155 8.1E-50 T 11-10-2018 UP17_12080 64ec930df2eaf189f5d2e12d8bac0adb 334 Pfam PF16868 NMT1-like family 54 329 2.7E-67 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family UP17_12080 64ec930df2eaf189f5d2e12d8bac0adb 334 Gene3D G3DSA:3.40.190.10 54 329 1.3E-81 T 11-10-2018 UP17_12080 64ec930df2eaf189f5d2e12d8bac0adb 334 Gene3D G3DSA:3.40.190.10 129 266 1.3E-81 T 11-10-2018 UP17_12080 64ec930df2eaf189f5d2e12d8bac0adb 334 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 12 329 4.9E-81 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family UP17_12080 64ec930df2eaf189f5d2e12d8bac0adb 334 SUPERFAMILY SSF53850 51 331 6.53E-59 T 11-10-2018 UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 210 232 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 Gene3D G3DSA:3.40.50.720 1 150 6.2E-30 T 11-10-2018 UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 1 87 6.0E-14 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 SUPERFAMILY SSF51735 1 146 5.26E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 Gene3D G3DSA:1.10.3730.10 151 252 3.0E-14 T 11-10-2018 UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 PIRSF PIRSF000193 1 256 1.5E-61 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 SUPERFAMILY SSF48179 150 252 5.95E-18 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_16840 f477bbe912b56fd4f9746fa03453e6d2 265 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 154 250 1.9E-15 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 SMART SM00533 9 315 3.6E-30 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 783 22.065 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 PIRSF PIRSF005814 1 784 6.8E-274 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 SUPERFAMILY SSF52540 293 515 3.0E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 Pfam PF00488 MutS domain V 331 511 1.4E-32 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 Gene3D G3DSA:1.10.1420.10 138 259 2.3E-7 T 11-10-2018 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 SMART SM00463 706 784 1.2E-20 T 11-10-2018 IPR002625 Smr domain UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 Gene3D G3DSA:1.10.1420.10 86 283 2.3E-7 T 11-10-2018 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 SMART SM00534 328 513 2.4E-72 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 783 9.7E-272 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 SUPERFAMILY SSF160443 707 782 4.05E-9 T 11-10-2018 IPR036063 Smr domain superfamily UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 SUPERFAMILY SSF48334 17 287 1.19E-29 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 Pfam PF01713 Smr domain 709 784 6.8E-20 T 11-10-2018 IPR002625 Smr domain UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 Gene3D G3DSA:3.30.1370.110 697 784 9.0E-24 T 11-10-2018 UP17_17925 4890ba9335a374d52f5f900bfd2975fb 784 Gene3D G3DSA:3.40.50.300 293 598 2.4E-79 T 11-10-2018 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 Pfam PF04545 Sigma-70, region 4 173 223 1.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 Gene3D G3DSA:1.20.120.1810 19 123 1.1E-23 T 11-10-2018 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 PRINTS PR00046 Major sigma-70 factor signature 212 223 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 PRINTS PR00046 Major sigma-70 factor signature 176 188 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 PRINTS PR00046 Major sigma-70 factor signature 197 212 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 SUPERFAMILY SSF88659 139 225 8.94E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 SUPERFAMILY SSF88946 10 122 3.14E-33 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 PIRSF PIRSF000770 4 240 1.5E-89 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 Gene3D G3DSA:1.10.10.10 154 235 2.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 8.0E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 5 228 5.3E-113 T 11-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16905 5f0a6195f1cede4ad87c837124897b04 240 Pfam PF04542 Sigma-70 region 2 54 123 4.7E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_07815 077a675250fbd3f84bd8b86e725f51c4 421 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 402 1.5E-83 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G UP17_07815 077a675250fbd3f84bd8b86e725f51c4 421 Pfam PF07559 Flagellar basal body protein FlaE 185 298 1.1E-10 T 11-10-2018 IPR011491 Flagellar hook protein FlgE UP17_07815 077a675250fbd3f84bd8b86e725f51c4 421 Pfam PF00460 Flagella basal body rod protein 5 35 2.8E-12 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UP17_07815 077a675250fbd3f84bd8b86e725f51c4 421 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site UP17_07815 077a675250fbd3f84bd8b86e725f51c4 421 SUPERFAMILY SSF117143 92 381 1.44E-58 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like UP17_07815 077a675250fbd3f84bd8b86e725f51c4 421 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 342 419 3.4E-21 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UP17_07815 077a675250fbd3f84bd8b86e725f51c4 421 Gene3D G3DSA:2.60.98.20 143 303 1.2E-9 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 SUPERFAMILY SSF63411 4 151 2.2E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 151 1.7E-51 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 PIRSF PIRSF006160 1 157 1.8E-61 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 Gene3D G3DSA:3.30.1360.80 1 157 2.8E-62 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.674 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 148 2.0E-73 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_22140 21ad9fad585deb56ae446f7ba680b96a 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 Gene3D G3DSA:1.10.287.380 562 639 1.3E-7 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 Pfam PF00005 ABC transporter 19 195 5.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 Pfam PF00005 ABC transporter 347 476 1.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 SMART SM00382 28 240 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_01535 3a98692776da56a8efbc7dafac36e397 639 SMART SM00382 355 521 6.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_01535 3a98692776da56a8efbc7dafac36e397 639 Pfam PF16326 ABC transporter C-terminal domain 571 639 2.3E-14 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 Gene3D G3DSA:3.40.50.300 1 289 7.8E-69 T 11-10-2018 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 SUPERFAMILY SSF52540 4 248 7.06E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01535 3a98692776da56a8efbc7dafac36e397 639 Pfam PF12848 ABC transporter 234 318 1.1E-23 T 11-10-2018 IPR032781 ABC-transporter extension domain UP17_01535 3a98692776da56a8efbc7dafac36e397 639 Gene3D G3DSA:3.40.50.300 292 556 5.5E-59 T 11-10-2018 UP17_01535 3a98692776da56a8efbc7dafac36e397 639 SUPERFAMILY SSF52540 313 535 2.36E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01175 c32af4e2acf82d7262386f6c7b26f3cd 392 PIRSF PIRSF038994 1 390 1.8E-135 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 UP17_01175 c32af4e2acf82d7262386f6c7b26f3cd 392 SUPERFAMILY SSF51338 4 390 2.09E-16 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_01175 c32af4e2acf82d7262386f6c7b26f3cd 392 Gene3D G3DSA:2.30.40.10 12 384 1.1E-146 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_01175 c32af4e2acf82d7262386f6c7b26f3cd 392 SUPERFAMILY SSF51556 59 357 7.78E-98 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_01175 c32af4e2acf82d7262386f6c7b26f3cd 392 Pfam PF01979 Amidohydrolase family 56 385 3.1E-33 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_01175 c32af4e2acf82d7262386f6c7b26f3cd 392 Gene3D G3DSA:3.20.20.140 59 357 1.1E-146 T 11-10-2018 UP17_01175 c32af4e2acf82d7262386f6c7b26f3cd 392 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 384 7.9E-119 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 SUPERFAMILY SSF56601 185 594 1.74E-94 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 SUPERFAMILY SSF54184 589 644 5.49E-11 T 11-10-2018 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 571 7.8E-88 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Gene3D G3DSA:3.30.70.2110 78 155 6.1E-54 T 11-10-2018 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Gene3D G3DSA:3.90.1310.10 59 200 6.1E-54 T 11-10-2018 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Pfam PF03717 Penicillin-binding Protein dimerisation domain 57 212 7.8E-23 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Pfam PF03793 PASTA domain 648 701 6.6E-7 T 11-10-2018 IPR005543 PASTA domain UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Pfam PF03793 PASTA domain 594 644 2.8E-11 T 11-10-2018 IPR005543 PASTA domain UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 SMART SM00740 649 703 0.0077 T 11-10-2018 IPR005543 PASTA domain UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 SMART SM00740 586 646 7.3E-9 T 11-10-2018 IPR005543 PASTA domain UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Gene3D G3DSA:2.20.70.70 54 220 6.1E-54 T 11-10-2018 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 SUPERFAMILY SSF56519 53 233 9.81E-43 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 SUPERFAMILY SSF54184 647 701 4.06E-11 T 11-10-2018 UP17_07285 1e03b2b7b17dcc891c2801632285e08a 717 Gene3D G3DSA:3.40.710.10 227 582 2.8E-101 T 11-10-2018 UP17_14235 23e604fa75dd445c2f5cc5a9f2cc525d 198 Pfam PF00510 Cytochrome c oxidase subunit III 21 196 8.1E-18 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14235 23e604fa75dd445c2f5cc5a9f2cc525d 198 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 10 197 4.7E-80 T 11-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 UP17_14235 23e604fa75dd445c2f5cc5a9f2cc525d 198 SUPERFAMILY SSF81452 17 195 4.32E-50 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14235 23e604fa75dd445c2f5cc5a9f2cc525d 198 Gene3D G3DSA:1.20.120.80 13 197 1.9E-49 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Pfam PF02151 UvrB/uvrC motif 419 452 2.6E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Gene3D G3DSA:3.40.50.300 151 343 4.7E-72 T 11-10-2018 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Gene3D G3DSA:1.10.1780.10 1 150 1.4E-62 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 4.5E-18 T 11-10-2018 IPR004176 Clp, N-terminal UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 1.5E-17 T 11-10-2018 IPR004176 Clp, N-terminal UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 SMART SM00382 200 343 4.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 SMART SM00382 537 677 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 SUPERFAMILY SSF52540 486 799 9.86E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 SUPERFAMILY SSF81923 5 145 2.65E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 707 2.5E-57 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 793 5.4E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 SUPERFAMILY SSF52540 160 468 1.22E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Gene3D G3DSA:3.40.50.300 490 712 2.2E-89 T 11-10-2018 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Gene3D G3DSA:4.10.860.10 409 467 3.4E-53 T 11-10-2018 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 317 1.6E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Gene3D G3DSA:1.10.8.60 714 807 1.4E-28 T 11-10-2018 UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 SMART SM01086 714 803 4.5E-39 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_00545 4761e25beb994833f87a89c5d1e9179a 813 Gene3D G3DSA:1.10.8.60 346 481 3.4E-53 T 11-10-2018 UP17_04990 b8b0001815966dede169f8f3ddec7aa4 308 Pfam PF01545 Cation efflux family 25 217 3.0E-47 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_04990 b8b0001815966dede169f8f3ddec7aa4 308 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 21 297 3.4E-93 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_04990 b8b0001815966dede169f8f3ddec7aa4 308 SUPERFAMILY SSF161111 18 218 5.75E-57 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_04990 b8b0001815966dede169f8f3ddec7aa4 308 SUPERFAMILY SSF160240 221 294 2.35E-8 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 UP17_04990 b8b0001815966dede169f8f3ddec7aa4 308 Gene3D G3DSA:1.20.1510.10 21 217 2.7E-45 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_19905 049dc29a4c9973720aed89cf430148e3 306 Pfam PF13602 Zinc-binding dehydrogenase 257 300 4.6E-11 T 11-10-2018 UP17_19905 049dc29a4c9973720aed89cf430148e3 306 Gene3D G3DSA:3.40.50.720 145 252 1.9E-94 T 11-10-2018 UP17_19905 049dc29a4c9973720aed89cf430148e3 306 SUPERFAMILY SSF51735 127 263 1.69E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_19905 049dc29a4c9973720aed89cf430148e3 306 Gene3D G3DSA:3.90.180.10 13 300 1.9E-94 T 11-10-2018 UP17_19905 049dc29a4c9973720aed89cf430148e3 306 SUPERFAMILY SSF50129 1 161 1.26E-29 T 11-10-2018 IPR011032 GroES-like superfamily UP17_19905 049dc29a4c9973720aed89cf430148e3 306 SMART SM00829 10 300 1.6E-12 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_19905 049dc29a4c9973720aed89cf430148e3 306 Pfam PF00107 Zinc-binding dehydrogenase 166 248 5.1E-15 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_19905 049dc29a4c9973720aed89cf430148e3 306 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 106 1.4E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Pfam PF00989 PAS fold 204 310 3.2E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 540 7.4E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SUPERFAMILY SSF55785 188 317 1.2E-18 T 11-10-2018 IPR035965 PAS domain superfamily UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Pfam PF08448 PAS fold 79 192 1.4E-7 T 11-10-2018 IPR013656 PAS fold-4 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SUPERFAMILY SSF55874 387 541 9.82E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Gene3D G3DSA:1.10.287.130 322 396 2.4E-17 T 11-10-2018 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Gene3D G3DSA:3.30.450.20 198 321 1.5E-15 T 11-10-2018 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SUPERFAMILY SSF55785 64 189 8.38E-13 T 11-10-2018 IPR035965 PAS domain superfamily UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Gene3D G3DSA:3.30.565.10 399 541 1.7E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Gene3D G3DSA:3.30.450.20 57 197 6.8E-15 T 11-10-2018 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 Pfam PF00512 His Kinase A (phospho-acceptor) domain 336 395 5.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SUPERFAMILY SSF47384 324 395 6.47E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SMART SM00091 203 270 1.2E-7 T 11-10-2018 IPR000014 PAS domain UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SMART SM00091 72 137 13.0 T 11-10-2018 IPR000014 PAS domain UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SMART SM00387 439 541 9.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 200 326 2.6E-16 T 11-10-2018 IPR000014 PAS domain UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 198 9.1E-7 T 11-10-2018 IPR000014 PAS domain UP17_02180 9a5dec9236622a719a466fe7e4803ad3 541 SMART SM00388 334 397 5.3E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_10675 f64062449e2618d48e1f56111137e672 136 Gene3D G3DSA:3.40.50.720 1 136 9.1E-39 T 11-10-2018 UP17_10675 f64062449e2618d48e1f56111137e672 136 SUPERFAMILY SSF51735 9 134 4.73E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10675 f64062449e2618d48e1f56111137e672 136 Pfam PF13380 CoA binding domain 18 132 3.7E-37 T 11-10-2018 IPR003781 CoA-binding GO:0048037 UP17_10675 f64062449e2618d48e1f56111137e672 136 SMART SM00881 13 106 4.1E-16 T 11-10-2018 IPR003781 CoA-binding GO:0048037 UP17_15105 f884db45317fc8ee9fbe85e65deb9d6a 183 PIRSF PIRSF021290 1 179 5.0E-65 T 11-10-2018 IPR010697 Protein of unknown function DUF1273 UP17_15105 f884db45317fc8ee9fbe85e65deb9d6a 183 SUPERFAMILY SSF102405 1 177 3.11E-60 T 11-10-2018 UP17_15105 f884db45317fc8ee9fbe85e65deb9d6a 183 Hamap MF_01575 UPF0398 protein . 1 177 33.807 T 11-10-2018 IPR010697 Protein of unknown function DUF1273 UP17_15105 f884db45317fc8ee9fbe85e65deb9d6a 183 Pfam PF06908 Protein of unknown function (DUF1273) 4 171 2.8E-64 T 11-10-2018 IPR010697 Protein of unknown function DUF1273 UP17_15105 f884db45317fc8ee9fbe85e65deb9d6a 183 Gene3D G3DSA:3.40.50.450 1 180 8.1E-63 T 11-10-2018 UP17_16370 cfb751f5b69d6aa80cd561a1c675d383 338 Pfam PF16872 Putative phage abortive infection protein 214 301 5.0E-13 T 11-10-2018 IPR031709 Putative phage abortive infection protein UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 Gene3D G3DSA:3.40.50.920 541 667 7.7E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 666 2.6E-301 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 SUPERFAMILY SSF52518 342 528 4.16E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 SUPERFAMILY SSF52922 535 667 1.44E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 Pfam PF02780 Transketolase, C-terminal domain 549 657 7.2E-9 T 11-10-2018 IPR033248 Transketolase, C-terminal domain UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 339 9.0E-154 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 Gene3D G3DSA:3.40.50.970 332 539 2.8E-79 T 11-10-2018 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 SMART SM00861 355 526 1.4E-68 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 Gene3D G3DSA:3.40.50.970 4 331 5.6E-126 T 11-10-2018 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 9.8E-44 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 UP17_09310 fd5ab652b5e950dab96864745d28b6b8 667 SUPERFAMILY SSF52518 8 326 2.28E-116 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_06465 529eb752191fbf7fa29c7445408c88a5 168 Pfam PF13420 Acetyltransferase (GNAT) domain 8 148 3.9E-13 T 11-10-2018 UP17_06465 529eb752191fbf7fa29c7445408c88a5 168 SUPERFAMILY SSF55729 5 166 4.33E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_06465 529eb752191fbf7fa29c7445408c88a5 168 Gene3D G3DSA:3.40.630.30 3 168 5.7E-39 T 11-10-2018 UP17_10835 d4d9047240c9fecbe0bd66443180efb1 313 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 177 304 2.0E-20 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_10835 d4d9047240c9fecbe0bd66443180efb1 313 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 19 143 1.4E-24 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_10835 d4d9047240c9fecbe0bd66443180efb1 313 SUPERFAMILY SSF55961 165 306 2.64E-36 T 11-10-2018 UP17_10835 d4d9047240c9fecbe0bd66443180efb1 313 Gene3D G3DSA:3.30.530.20 160 313 3.8E-34 T 11-10-2018 IPR023393 START-like domain superfamily UP17_10835 d4d9047240c9fecbe0bd66443180efb1 313 Gene3D G3DSA:3.30.530.20 2 150 1.6E-39 T 11-10-2018 IPR023393 START-like domain superfamily UP17_10835 d4d9047240c9fecbe0bd66443180efb1 313 SUPERFAMILY SSF55961 7 145 3.3E-31 T 11-10-2018 UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 371 389 3.3E-8 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 397 421 3.3E-8 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 425 444 3.3E-8 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 455 475 3.3E-8 T 11-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 Pfam PF00326 Prolyl oligopeptidase family 388 595 3.3E-45 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 Pfam PF07676 WD40-like Beta Propeller Repeat 99 135 6.3E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 SUPERFAMILY SSF53474 345 594 1.91E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 SUPERFAMILY SSF82171 13 330 6.41E-36 T 11-10-2018 UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 Gene3D G3DSA:3.40.50.1820 315 596 1.5E-69 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_09515 e3ef0b650ad443ef6710eca7ae4b22a9 596 Gene3D G3DSA:2.120.10.30 58 248 9.2E-20 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like UP17_03560 a6cc857424db5746ba0fe0fc041a58b8 255 Pfam PF00005 ABC transporter 24 172 3.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03560 a6cc857424db5746ba0fe0fc041a58b8 255 SUPERFAMILY SSF52540 4 224 2.79E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03560 a6cc857424db5746ba0fe0fc041a58b8 255 SMART SM00382 33 231 6.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_03560 a6cc857424db5746ba0fe0fc041a58b8 255 Gene3D G3DSA:3.40.50.300 2 249 2.9E-65 T 11-10-2018 UP17_03235 2ecefc5b0d298eacad117930c62bb25d 129 SUPERFAMILY SSF49503 43 129 1.22E-18 T 11-10-2018 IPR008972 Cupredoxin UP17_03235 2ecefc5b0d298eacad117930c62bb25d 129 Pfam PF13473 Cupredoxin-like domain 39 128 4.1E-24 T 11-10-2018 IPR028096 EfeO-type cupredoxin-like domain UP17_03235 2ecefc5b0d298eacad117930c62bb25d 129 Gene3D G3DSA:2.60.40.420 31 129 4.0E-36 T 11-10-2018 IPR008972 Cupredoxin UP17_15220 ae99db5d37ff41ba155cf61ab4e6030b 327 SUPERFAMILY SSF54593 4 281 2.04E-44 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_15220 ae99db5d37ff41ba155cf61ab4e6030b 327 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 142 259 1.4E-16 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_15220 ae99db5d37ff41ba155cf61ab4e6030b 327 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 90 2.5E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_15220 ae99db5d37ff41ba155cf61ab4e6030b 327 TIGRFAM TIGR02295 HpaD: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 5 300 1.9E-132 T 11-10-2018 IPR011981 3,4-dihydroxyphenylacetate 2,3-dioxygenase, Mn/Fe-type UP17_15220 ae99db5d37ff41ba155cf61ab4e6030b 327 Gene3D G3DSA:3.10.180.10 142 301 2.6E-46 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_15220 ae99db5d37ff41ba155cf61ab4e6030b 327 Gene3D G3DSA:3.10.180.10 1 140 1.1E-42 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_15220 ae99db5d37ff41ba155cf61ab4e6030b 327 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 237 258 - T 11-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 UP17_21665 04c3de0c8ec2c8b0e6d849aeae490cc0 221 Gene3D G3DSA:3.40.50.150 2 221 4.5E-75 T 11-10-2018 UP17_21665 04c3de0c8ec2c8b0e6d849aeae490cc0 221 Pfam PF01596 O-methyltransferase 19 203 1.3E-45 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 UP17_21665 04c3de0c8ec2c8b0e6d849aeae490cc0 221 SUPERFAMILY SSF53335 32 217 9.38E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_07940 b7d7bf94696395261ed52f12c65cfe8a 185 SUPERFAMILY SSF55194 4 184 1.31E-72 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 UP17_07940 b7d7bf94696395261ed52f12c65cfe8a 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.277 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 UP17_07940 b7d7bf94696395261ed52f12c65cfe8a 185 Pfam PF01765 Ribosome recycling factor 22 183 3.8E-65 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 UP17_07940 b7d7bf94696395261ed52f12c65cfe8a 185 Gene3D G3DSA:3.30.1360.40 31 105 6.4E-71 T 11-10-2018 UP17_07940 b7d7bf94696395261ed52f12c65cfe8a 185 Gene3D G3DSA:1.10.132.20 12 182 6.4E-71 T 11-10-2018 UP17_07940 b7d7bf94696395261ed52f12c65cfe8a 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.8E-76 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 Gene3D G3DSA:1.20.1560.10 1 315 4.6E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 SUPERFAMILY SSF90123 3 316 2.09E-80 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 Pfam PF00005 ABC transporter 349 498 3.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 Pfam PF00664 ABC transporter transmembrane region 17 286 2.0E-57 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 SMART SM00382 358 544 2.1E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 SUPERFAMILY SSF52540 322 569 7.48E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13365 0c10c17958b8ef13fd91ce34e42a967a 571 Gene3D G3DSA:3.40.50.300 330 571 7.3E-93 T 11-10-2018 UP17_06450 b8b4a62e9a493fabd0fb3dc17ca7a0f7 229 Pfam PF03070 TENA/THI-4/PQQC family 16 221 2.3E-52 T 11-10-2018 IPR004305 Thiaminase-2/PQQC UP17_06450 b8b4a62e9a493fabd0fb3dc17ca7a0f7 229 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 17 221 2.9E-61 T 11-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 UP17_06450 b8b4a62e9a493fabd0fb3dc17ca7a0f7 229 SUPERFAMILY SSF48613 6 220 3.41E-69 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 UP17_06450 b8b4a62e9a493fabd0fb3dc17ca7a0f7 229 PIRSF PIRSF003170 1 226 3.3E-29 T 11-10-2018 IPR026285 TenA_E protein UP17_06450 b8b4a62e9a493fabd0fb3dc17ca7a0f7 229 Gene3D G3DSA:1.20.910.10 2 229 1.1E-67 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 2 365 1.8E-66 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 SUPERFAMILY SSF53335 1 370 6.76E-91 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_25355 320063f60d7d66996ca705568b45a3d8 371 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 367 4.6E-73 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 70 82 - T 11-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 348 366 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 Gene3D G3DSA:3.90.120.10 249 359 1.2E-24 T 11-10-2018 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 111 125 7.4E-8 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 157 170 7.4E-8 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_25355 320063f60d7d66996ca705568b45a3d8 371 Gene3D G3DSA:3.40.50.150 1 216 6.0E-67 T 11-10-2018 UP17_08670 c16b90ecb8388c4e437719ee406a4592 226 Pfam PF13518 Helix-turn-helix domain 10 55 4.9E-6 T 11-10-2018 UP17_08670 c16b90ecb8388c4e437719ee406a4592 226 Pfam PF13518 Helix-turn-helix domain 131 181 2.9E-13 T 11-10-2018 UP17_08670 c16b90ecb8388c4e437719ee406a4592 226 SUPERFAMILY SSF48295 2 54 6.8E-8 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_08670 c16b90ecb8388c4e437719ee406a4592 226 SUPERFAMILY SSF48295 97 182 2.46E-18 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_08670 c16b90ecb8388c4e437719ee406a4592 226 SUPERFAMILY SSF48295 38 108 8.37E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_04755 c16b90ecb8388c4e437719ee406a4592 226 Pfam PF13518 Helix-turn-helix domain 10 55 4.9E-6 T 11-10-2018 UP17_04755 c16b90ecb8388c4e437719ee406a4592 226 Pfam PF13518 Helix-turn-helix domain 131 181 2.9E-13 T 11-10-2018 UP17_04755 c16b90ecb8388c4e437719ee406a4592 226 SUPERFAMILY SSF48295 2 54 6.8E-8 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_04755 c16b90ecb8388c4e437719ee406a4592 226 SUPERFAMILY SSF48295 97 182 2.46E-18 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_04755 c16b90ecb8388c4e437719ee406a4592 226 SUPERFAMILY SSF48295 38 108 8.37E-12 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_08475 07dd30967e163d7062c36ac6297e273c 276 Pfam PF12730 ABC-2 family transporter protein 6 194 1.6E-9 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 Pfam PF06445 GyrI-like small molecule binding domain 128 287 3.6E-32 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 Gene3D G3DSA:3.20.80.10 128 288 1.9E-53 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 Gene3D G3DSA:1.10.10.60 4 57 8.6E-17 T 11-10-2018 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 SUPERFAMILY SSF55136 128 288 6.63E-34 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 SUPERFAMILY SSF46689 5 55 6.81E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 SMART SM00342 21 104 1.9E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 Gene3D G3DSA:1.10.10.60 58 111 4.2E-14 T 11-10-2018 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 Pfam PF12833 Helix-turn-helix domain 28 105 1.0E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 SUPERFAMILY SSF46689 57 107 3.54E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 9.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 9.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_18525 4bd6e2778ff36c1e0e7f6dc13787766a 289 SMART SM00871 128 287 1.4E-36 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding UP17_07020 5f46ad25ac8c3cd5892b845a0baa0dea 259 SUPERFAMILY SSF51366 12 256 7.06E-78 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_07020 5f46ad25ac8c3cd5892b845a0baa0dea 259 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 254 8.0E-89 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 UP17_07020 5f46ad25ac8c3cd5892b845a0baa0dea 259 Gene3D G3DSA:3.20.20.70 1 258 1.9E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_07020 5f46ad25ac8c3cd5892b845a0baa0dea 259 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 UP17_07020 5f46ad25ac8c3cd5892b845a0baa0dea 259 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 257 34.162 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 UP17_07020 5f46ad25ac8c3cd5892b845a0baa0dea 259 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 31 253 29.609 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 TIGRFAM TIGR00417 speE: spermidine synthase 4 269 5.8E-121 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 11-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 Pfam PF01564 Spermine/spermidine synthase domain 58 238 2.3E-68 T 11-10-2018 UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 SUPERFAMILY SSF53335 3 274 8.96E-86 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 Gene3D G3DSA:2.30.140.10 2 52 5.6E-24 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 Gene3D G3DSA:3.40.50.150 53 274 4.8E-75 T 11-10-2018 UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 Pfam PF17284 Spermidine synthase tetramerisation domain 3 54 4.5E-18 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 UP17_24370 8edc66f20a27945f92573f2d34e753f1 275 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 41.072 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 Pfam PF12847 Methyltransferase domain 243 354 1.0E-6 T 11-10-2018 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 Gene3D G3DSA:3.40.50.150 207 404 4.6E-66 T 11-10-2018 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 PIRSF PIRSF036428 1 400 3.4E-111 T 11-10-2018 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00860+2.1.1.132 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 SUPERFAMILY SSF53790 7 201 2.22E-32 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 7 198 3.5E-53 T 11-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 173 4.5E-12 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 SUPERFAMILY SSF53335 219 391 2.81E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 228 348 2.3E-34 T 11-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 UP17_10425 5c90ed9f7377eb08041d823acafc09c9 404 Gene3D G3DSA:3.40.1010.10 2 100 1.2E-15 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_08110 d02dba0ff7056296c178432dece6baa9 511 SUPERFAMILY SSF52540 3 226 1.3E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08110 d02dba0ff7056296c178432dece6baa9 511 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_08110 d02dba0ff7056296c178432dece6baa9 511 SMART SM00382 29 217 4.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_08110 d02dba0ff7056296c178432dece6baa9 511 Pfam PF00005 ABC transporter 21 169 3.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_08110 d02dba0ff7056296c178432dece6baa9 511 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_08110 d02dba0ff7056296c178432dece6baa9 511 SUPERFAMILY SSF52540 242 491 2.24E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08110 d02dba0ff7056296c178432dece6baa9 511 Gene3D G3DSA:3.40.50.300 1 235 9.4E-55 T 11-10-2018 UP17_08110 d02dba0ff7056296c178432dece6baa9 511 Gene3D G3DSA:3.40.50.300 252 495 2.5E-42 T 11-10-2018 UP17_08110 d02dba0ff7056296c178432dece6baa9 511 Pfam PF00005 ABC transporter 274 429 5.2E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_04650 a516d863d91ce34efdbdeefb17d166a4 85 Pfam PF04226 Transglycosylase associated protein 34 78 7.4E-11 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 UP17_07610 b6eeba69ab2d3f6793dac39cac5dd6a3 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.7E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_07610 b6eeba69ab2d3f6793dac39cac5dd6a3 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.365 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 UP17_07610 b6eeba69ab2d3f6793dac39cac5dd6a3 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 35 75 7.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 UP17_07610 b6eeba69ab2d3f6793dac39cac5dd6a3 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_07610 b6eeba69ab2d3f6793dac39cac5dd6a3 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 75 2.2E-33 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 UP17_07610 b6eeba69ab2d3f6793dac39cac5dd6a3 77 SUPERFAMILY SSF47336 3 76 1.05E-21 T 11-10-2018 IPR036736 ACP-like superfamily UP17_07610 b6eeba69ab2d3f6793dac39cac5dd6a3 77 Gene3D G3DSA:1.10.1200.10 1 75 3.0E-27 T 11-10-2018 IPR036736 ACP-like superfamily UP17_05990 b26e6ac816646515eba5fe6820a69623 193 Gene3D G3DSA:3.40.630.30 1 137 2.4E-22 T 11-10-2018 UP17_05990 b26e6ac816646515eba5fe6820a69623 193 Pfam PF13508 Acetyltransferase (GNAT) domain 51 110 1.5E-9 T 11-10-2018 IPR000182 GNAT domain UP17_05990 b26e6ac816646515eba5fe6820a69623 193 SUPERFAMILY SSF55729 41 114 7.5E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_17365 00ba75172dd27b92af932d56e8edf048 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.09 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 UP17_17365 00ba75172dd27b92af932d56e8edf048 147 Gene3D G3DSA:3.50.80.10 1 147 7.7E-59 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily UP17_17365 00ba75172dd27b92af932d56e8edf048 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 2.0E-57 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 UP17_17365 00ba75172dd27b92af932d56e8edf048 147 SUPERFAMILY SSF69500 1 144 3.92E-58 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily UP17_17365 00ba75172dd27b92af932d56e8edf048 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 2.7E-61 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 UP17_14160 8acee30dcd62a828be52613abfad0207 410 SUPERFAMILY SSF51649 122 408 3.93E-85 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 UP17_14160 8acee30dcd62a828be52613abfad0207 410 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 127 407 2.1E-43 T 11-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 UP17_14160 8acee30dcd62a828be52613abfad0207 410 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 408 57.64 T 11-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 UP17_14160 8acee30dcd62a828be52613abfad0207 410 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 3 100 1.0E-5 T 11-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 UP17_14160 8acee30dcd62a828be52613abfad0207 410 Gene3D G3DSA:3.20.20.110 122 409 2.6E-97 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 UP17_14160 8acee30dcd62a828be52613abfad0207 410 Gene3D G3DSA:3.30.70.150 1 121 1.5E-29 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 UP17_14160 8acee30dcd62a828be52613abfad0207 410 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 408 1.1E-199 T 11-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 UP17_14160 8acee30dcd62a828be52613abfad0207 410 SUPERFAMILY SSF54966 1 121 6.0E-29 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 UP17_10210 cccae2ff20586c476327898f9be914bf 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_10210 cccae2ff20586c476327898f9be914bf 260 SUPERFAMILY SSF51735 4 254 2.18E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.8E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.8E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.8E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.8E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.8E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 Pfam PF00106 short chain dehydrogenase 5 197 3.5E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10210 cccae2ff20586c476327898f9be914bf 260 PIRSF PIRSF000126 1 260 1.7E-65 T 11-10-2018 UP17_10210 cccae2ff20586c476327898f9be914bf 260 Gene3D G3DSA:3.40.50.720 2 259 9.3E-56 T 11-10-2018 UP17_01555 368ffa32afb6d110a54f8444ad77b035 241 Pfam PF02517 CAAX protease self-immunity 129 213 9.7E-17 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.709 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 Pfam PF13522 Glutamine amidotransferase domain 64 192 3.6E-22 T 11-10-2018 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 2.8E-230 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 Pfam PF01380 SIS domain 457 582 9.7E-17 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 Pfam PF01380 SIS domain 288 413 4.3E-35 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 Gene3D G3DSA:3.60.20.10 2 239 2.6E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 SUPERFAMILY SSF53697 244 600 5.29E-94 T 11-10-2018 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 Gene3D G3DSA:3.40.50.10490 444 600 2.1E-61 T 11-10-2018 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 Gene3D G3DSA:3.40.50.10490 243 443 9.6E-64 T 11-10-2018 UP17_00995 dc216b6da3bf9982a1baa1249d637ce7 600 SUPERFAMILY SSF56235 2 234 1.05E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 7.8E-44 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 Gene3D G3DSA:3.30.470.130 1 448 2.1E-201 T 11-10-2018 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 7.7E-83 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 9.4E-46 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 SUPERFAMILY SSF52440 1 113 1.73E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 SUPERFAMILY SSF51246 331 442 1.73E-46 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 SMART SM00878 336 442 8.5E-71 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 SUPERFAMILY SSF56059 116 328 1.23E-66 T 11-10-2018 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.4E-231 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 UP17_10225 0ce991e21c8000ffaf742cd0ecd2789e 451 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_00440 7accb63ec9c89fd872059f2fbe68e26e 70 SUPERFAMILY SSF47413 5 68 1.53E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_00440 7accb63ec9c89fd872059f2fbe68e26e 70 Pfam PF01381 Helix-turn-helix 10 64 5.2E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_00440 7accb63ec9c89fd872059f2fbe68e26e 70 Gene3D G3DSA:1.10.260.40 3 67 2.3E-17 T 11-10-2018 UP17_00440 7accb63ec9c89fd872059f2fbe68e26e 70 SMART SM00530 9 64 2.8E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 PIRSF PIRSF005578 1 268 2.5E-103 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 SUPERFAMILY SSF55174 4 71 3.97E-13 T 11-10-2018 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 Gene3D G3DSA:3.40.50.150 65 275 4.1E-83 T 11-10-2018 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 Pfam PF01728 FtsJ-like methyltransferase 62 243 2.4E-17 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 SUPERFAMILY SSF53335 52 245 1.33E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 Gene3D G3DSA:3.10.290.10 2 64 8.5E-23 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 SMART SM00363 6 71 1.3E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 Pfam PF01479 S4 domain 6 49 7.1E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_16065 d5c60b74956e3b8f272b64c383c7b64d 275 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 2.3E-93 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 483 5.6E-168 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 Pfam PF01225 Mur ligase family, catalytic domain 23 94 4.0E-12 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 Gene3D G3DSA:3.40.1390.10 2 96 6.6E-28 T 11-10-2018 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 483 36.115 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 Gene3D G3DSA:3.40.1190.10 97 336 8.7E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 Gene3D G3DSA:3.90.190.20 337 489 1.1E-59 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 SUPERFAMILY SSF53623 97 331 1.13E-73 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 Pfam PF08245 Mur ligase middle domain 106 312 3.7E-55 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 SUPERFAMILY SSF63418 1 97 4.97E-26 T 11-10-2018 IPR035911 MurE/MurF, N-terminal UP17_07300 4e1f57bef97345220f9761ba39518d65 490 SUPERFAMILY SSF53244 332 485 4.84E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_07300 4e1f57bef97345220f9761ba39518d65 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 416 2.3E-23 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UP17_05625 e6fc88ed428471fb98ab7d0359adccb0 347 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 141 157 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 UP17_05625 e6fc88ed428471fb98ab7d0359adccb0 347 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 UP17_05625 e6fc88ed428471fb98ab7d0359adccb0 347 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 341 1.4E-127 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 UP17_05625 e6fc88ed428471fb98ab7d0359adccb0 347 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 342 2.1E-122 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 UP17_05625 e6fc88ed428471fb98ab7d0359adccb0 347 SUPERFAMILY SSF51726 6 345 1.01E-104 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_05625 e6fc88ed428471fb98ab7d0359adccb0 347 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 343 47.473 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 UP17_05625 e6fc88ed428471fb98ab7d0359adccb0 347 Gene3D G3DSA:3.20.20.210 1 347 7.1E-147 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_22080 1ad5af2a848e00a5a4fce09d0f9b8876 135 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 131 5.7E-16 T 11-10-2018 IPR028973 PhnB-like UP17_22080 1ad5af2a848e00a5a4fce09d0f9b8876 135 Gene3D G3DSA:3.10.180.10 9 135 4.3E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_22080 1ad5af2a848e00a5a4fce09d0f9b8876 135 SUPERFAMILY SSF54593 4 134 4.91E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_23735 df33338ecb658bf651bd29752b896902 120 Pfam PF03646 FlaG protein 34 118 7.4E-26 T 11-10-2018 IPR005186 FlaG protein UP17_23735 df33338ecb658bf651bd29752b896902 120 Gene3D G3DSA:3.30.160.170 19 116 2.9E-30 T 11-10-2018 IPR035924 FlaG-like superfamily UP17_23735 df33338ecb658bf651bd29752b896902 120 SUPERFAMILY SSF160214 42 120 6.28E-26 T 11-10-2018 IPR035924 FlaG-like superfamily UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Gene3D G3DSA:3.30.930.10 225 533 3.3E-132 T 11-10-2018 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Pfam PF03129 Anticodon binding domain 543 632 3.3E-22 T 11-10-2018 IPR004154 Anticodon-binding UP17_19610 89c65157413c2572c1ed2d10d970c016 639 SMART SM00863 173 222 2.3E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 633 2.5E-241 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 SUPERFAMILY SSF55681 246 528 1.19E-94 T 11-10-2018 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 SUPERFAMILY SSF55186 67 244 5.49E-63 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 2.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 2.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 332 360 2.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 2.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 365 388 2.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Gene3D G3DSA:3.40.50.800 534 638 2.1E-32 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 175 222 7.8E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Gene3D G3DSA:3.30.54.20 134 190 2.4E-63 T 11-10-2018 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Gene3D G3DSA:3.30.980.10 73 224 2.4E-63 T 11-10-2018 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 636 35.517 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Pfam PF02824 TGS domain 6 65 5.6E-11 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 SUPERFAMILY SSF52954 532 636 6.95E-31 T 11-10-2018 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 SUPERFAMILY SSF81271 6 65 2.4E-14 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Gene3D G3DSA:3.10.20.30 4 66 1.1E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_19610 89c65157413c2572c1ed2d10d970c016 639 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 530 4.0E-40 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 Gene3D G3DSA:1.20.210.10 29 561 1.2E-196 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 500 2.4E-142 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 SUPERFAMILY SSF81442 44 554 6.02E-175 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 644 0.0 T 11-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02405 667e4677dcd462282a13fa48a696a05b 648 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 6.3E-98 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_05585 e65ef2d546fa608a6887fb786c068219 367 Gene3D G3DSA:3.40.640.10 17 254 2.3E-90 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_05585 e65ef2d546fa608a6887fb786c068219 367 PIRSF PIRSF000525 1 360 2.6E-154 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 UP17_05585 e65ef2d546fa608a6887fb786c068219 367 SUPERFAMILY SSF53383 3 357 1.71E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05585 e65ef2d546fa608a6887fb786c068219 367 Pfam PF00266 Aminotransferase class-V 6 340 2.6E-48 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_05585 e65ef2d546fa608a6887fb786c068219 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 359 1.3E-157 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 UP17_05585 e65ef2d546fa608a6887fb786c068219 367 Gene3D G3DSA:3.90.1150.10 257 359 2.8E-37 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_05585 e65ef2d546fa608a6887fb786c068219 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 49.066 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 UP17_05585 e65ef2d546fa608a6887fb786c068219 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site UP17_05465 6cdc5db392f3874cca29f631b3b78c49 538 Gene3D G3DSA:3.30.300.310 431 537 5.8E-33 T 11-10-2018 UP17_05465 6cdc5db392f3874cca29f631b3b78c49 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 521 1.8E-18 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_05465 6cdc5db392f3874cca29f631b3b78c49 538 Pfam PF00501 AMP-binding enzyme 14 435 9.5E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_05465 6cdc5db392f3874cca29f631b3b78c49 538 SUPERFAMILY SSF56801 6 534 5.89E-136 T 11-10-2018 UP17_05465 6cdc5db392f3874cca29f631b3b78c49 538 Gene3D G3DSA:3.40.50.12780 1 430 1.5E-123 T 11-10-2018 UP17_13845 705f29d454f427fc6f24cded0ecc7875 473 Gene3D G3DSA:3.40.309.10 249 441 7.3E-184 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_13845 705f29d454f427fc6f24cded0ecc7875 473 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 18 467 1.1E-196 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 UP17_13845 705f29d454f427fc6f24cded0ecc7875 473 Gene3D G3DSA:3.40.605.10 7 464 7.3E-184 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_13845 705f29d454f427fc6f24cded0ecc7875 473 SUPERFAMILY SSF53720 1 472 1.57E-169 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_13845 705f29d454f427fc6f24cded0ecc7875 473 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_13845 705f29d454f427fc6f24cded0ecc7875 473 Pfam PF00171 Aldehyde dehydrogenase family 7 468 1.3E-175 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 4.0E-40 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Gene3D G3DSA:3.40.120.10 210 323 4.3E-21 T 11-10-2018 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Gene3D G3DSA:3.40.120.10 34 190 1.4E-46 T 11-10-2018 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 SUPERFAMILY SSF53738 211 314 3.92E-18 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 513 553 5.0E-10 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Gene3D G3DSA:3.30.310.50 474 567 2.6E-8 T 11-10-2018 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 312 3.8E-23 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Gene3D G3DSA:3.40.120.10 324 452 5.2E-35 T 11-10-2018 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 450 8.8E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 229 248 4.3E-8 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 4.3E-8 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 4.3E-8 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 SUPERFAMILY SSF53738 304 454 2.24E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 SUPERFAMILY SSF55957 446 571 1.44E-14 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_12685 7d9e153fd1a770a784a22ea751aea997 576 SUPERFAMILY SSF53738 33 226 6.67E-44 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_23440 8d622564d72459b1f757a78c30db4279 77 Pfam PF03840 Preprotein translocase SecG subunit 4 74 3.7E-22 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UP17_23440 8d622564d72459b1f757a78c30db4279 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.0E-12 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UP17_23440 8d622564d72459b1f757a78c30db4279 77 PRINTS PR01651 Protein-export SecG membrane protein signature 56 77 1.0E-12 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UP17_23440 8d622564d72459b1f757a78c30db4279 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.0E-12 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UP17_23440 8d622564d72459b1f757a78c30db4279 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 75 4.9E-23 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 UP17_12830 fc257db6ab5de58b2fa378b00d5a2ed2 222 Pfam PF13460 NAD(P)H-binding 10 122 1.0E-8 T 11-10-2018 IPR016040 NAD(P)-binding domain UP17_12830 fc257db6ab5de58b2fa378b00d5a2ed2 222 SUPERFAMILY SSF51735 1 205 8.54E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_12830 fc257db6ab5de58b2fa378b00d5a2ed2 222 Gene3D G3DSA:3.40.50.720 1 221 2.8E-56 T 11-10-2018 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 374 8.0E-10 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 Gene3D G3DSA:3.30.450.20 31 172 3.8E-46 T 11-10-2018 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 SUPERFAMILY SSF103190 37 168 2.04E-39 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 Gene3D G3DSA:3.30.565.10 393 532 1.7E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 SUPERFAMILY SSF55785 224 324 8.64E-5 T 11-10-2018 IPR035965 PAS domain superfamily UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 SUPERFAMILY SSF55890 324 390 2.62E-13 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 Pfam PF17203 Single cache domain 3 37 168 3.8E-21 T 11-10-2018 IPR033463 Single cache domain 3 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 SMART SM00387 420 528 7.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 Gene3D G3DSA:3.30.450.20 200 315 4.1E-22 T 11-10-2018 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 7.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 7.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 7.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 526 7.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 SUPERFAMILY SSF55874 415 526 7.47E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06610 1b72a1667c2a7dfa12342282b3335373 533 Pfam PF00989 PAS fold 214 313 2.7E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_06725 e3a7c7e089ccb3be017e4db5ae53cfe3 80 Gene3D G3DSA:1.20.58.990 6 58 4.4E-11 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 UP17_06725 e3a7c7e089ccb3be017e4db5ae53cfe3 80 Pfam PF09388 Spo0E like sporulation regulatory protein 11 48 2.2E-10 T 11-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 UP17_06725 e3a7c7e089ccb3be017e4db5ae53cfe3 80 SUPERFAMILY SSF140500 7 54 1.24E-11 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 UP17_17525 33e9646f2a199104ef3379bc7f024fc1 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 1.5E-39 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17525 33e9646f2a199104ef3379bc7f024fc1 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 26.888 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17525 33e9646f2a199104ef3379bc7f024fc1 102 SUPERFAMILY SSF141091 1 101 6.8E-38 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17525 33e9646f2a199104ef3379bc7f024fc1 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_17525 33e9646f2a199104ef3379bc7f024fc1 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.0E-39 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 2.0E-84 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 PIRSF PIRSF001492 1 511 9.5E-205 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 SUPERFAMILY SSF64158 77 310 3.66E-92 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 Gene3D G3DSA:3.40.720.10 5 509 1.8E-232 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 SUPERFAMILY SSF53649 4 509 1.07E-74 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 Gene3D G3DSA:3.40.1450.10 77 312 1.8E-232 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 49.954 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 4.5E-213 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 UP17_23460 668d053e81cb4c17a558925b24e4e994 511 Pfam PF01676 Metalloenzyme superfamily 5 499 5.5E-80 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 UP17_00715 88b64700bab0fc284b5be06ff1fbc8f7 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.1E-38 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 UP17_00715 88b64700bab0fc284b5be06ff1fbc8f7 113 Gene3D G3DSA:3.90.470.10 1 113 1.6E-51 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00715 88b64700bab0fc284b5be06ff1fbc8f7 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00715 88b64700bab0fc284b5be06ff1fbc8f7 113 SUPERFAMILY SSF54843 1 112 3.14E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00715 88b64700bab0fc284b5be06ff1fbc8f7 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 31.009 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00715 88b64700bab0fc284b5be06ff1fbc8f7 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 8.9E-52 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07385 61ac161871ad8999901443a0e30df4e5 154 Gene3D G3DSA:3.30.110.150 58 154 1.6E-34 T 11-10-2018 IPR038594 SepF-like superfamily UP17_07385 61ac161871ad8999901443a0e30df4e5 154 Hamap MF_01197 Cell division protein SepF [sepF]. 1 144 20.953 T 11-10-2018 IPR023052 Cell division protein SepF GO:0090529 UP17_07385 61ac161871ad8999901443a0e30df4e5 154 Pfam PF04472 Cell division protein SepF 65 136 4.9E-30 T 11-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 UP17_24350 56af6ff2189ab747f9cadc18e2f7f5e7 317 Gene3D G3DSA:3.20.20.150 2 307 6.3E-92 T 11-10-2018 UP17_24350 56af6ff2189ab747f9cadc18e2f7f5e7 317 Pfam PF03851 UV-endonuclease UvdE 5 272 2.2E-103 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 UP17_24350 56af6ff2189ab747f9cadc18e2f7f5e7 317 SUPERFAMILY SSF51658 87 279 5.56E-15 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily UP17_24350 56af6ff2189ab747f9cadc18e2f7f5e7 317 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 300 1.1E-99 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 UP17_24350 56af6ff2189ab747f9cadc18e2f7f5e7 317 Hamap MF_00606 UV DNA damage endonuclease [uvsE]. 12 303 36.754 T 11-10-2018 IPR023520 UV-endonuclease UvdE, bacterial GO:0004519|GO:0009411 UP17_22855 48d0eba7dc36871ef11b47a957606795 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 31 46 1.3E-18 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22855 48d0eba7dc36871ef11b47a957606795 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 57 69 1.3E-18 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22855 48d0eba7dc36871ef11b47a957606795 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 1.3E-18 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22855 48d0eba7dc36871ef11b47a957606795 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 154 1.3E-18 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22855 48d0eba7dc36871ef11b47a957606795 196 SUPERFAMILY SSF50891 17 196 5.11E-61 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_22855 48d0eba7dc36871ef11b47a957606795 196 PIRSF PIRSF001467 6 128 9.4E-44 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 UP17_22855 48d0eba7dc36871ef11b47a957606795 196 PIRSF PIRSF001467 130 195 1.3E-10 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 UP17_22855 48d0eba7dc36871ef11b47a957606795 196 Gene3D G3DSA:2.40.100.10 3 129 3.9E-50 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_22855 48d0eba7dc36871ef11b47a957606795 196 Gene3D G3DSA:2.40.100.10 140 196 2.2E-13 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_22855 48d0eba7dc36871ef11b47a957606795 196 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 193 3.7E-48 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_08155 ce11e5e13d2285e2a7e2a48752f95762 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 190 2.0E-60 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 UP17_08155 ce11e5e13d2285e2a7e2a48752f95762 194 Gene3D G3DSA:1.20.120.1760 3 190 1.3E-10 T 11-10-2018 UP17_08155 ce11e5e13d2285e2a7e2a48752f95762 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UP17_08155 ce11e5e13d2285e2a7e2a48752f95762 194 PIRSF PIRSF000847 1 194 2.1E-49 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 UP17_08155 ce11e5e13d2285e2a7e2a48752f95762 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 81 9.2E-18 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UP17_23710 858da26594e5885111280cb652199da4 107 Gene3D G3DSA:1.10.260.40 1 107 7.7E-31 T 11-10-2018 UP17_23710 858da26594e5885111280cb652199da4 107 SMART SM00530 5 61 7.7E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_23710 858da26594e5885111280cb652199da4 107 Pfam PF08671 Anti-repressor SinI 71 98 1.4E-11 T 11-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 UP17_23710 858da26594e5885111280cb652199da4 107 SUPERFAMILY SSF47406 71 104 1.7E-12 T 11-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 UP17_23710 858da26594e5885111280cb652199da4 107 Pfam PF01381 Helix-turn-helix 6 60 6.8E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_23710 858da26594e5885111280cb652199da4 107 SUPERFAMILY SSF47413 1 65 1.04E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_05400 0ab1010a12ccb2c57c8abcad54815dee 398 Pfam PF14398 YheC/D like ATP-grasp 154 376 8.9E-52 T 11-10-2018 IPR026838 Endospore coat-associated protein YheC/D UP17_05400 0ab1010a12ccb2c57c8abcad54815dee 398 Gene3D G3DSA:3.30.470.20 269 383 4.8E-6 T 11-10-2018 UP17_05400 0ab1010a12ccb2c57c8abcad54815dee 398 Gene3D G3DSA:3.30.1490.20 182 229 4.5E-5 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_05400 0ab1010a12ccb2c57c8abcad54815dee 398 SUPERFAMILY SSF56059 179 366 1.5E-13 T 11-10-2018 UP17_10865 4dd0694fcc5e3a93d6a811b0a16bb04e 251 Pfam PF07071 KDGP aldolase 10 226 3.0E-101 T 11-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 UP17_10865 4dd0694fcc5e3a93d6a811b0a16bb04e 251 Gene3D G3DSA:3.20.20.70 1 251 2.5E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_10865 4dd0694fcc5e3a93d6a811b0a16bb04e 251 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 10 245 7.2E-113 T 11-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 UP17_23290 32591a1f5527865bc9138acc2bd38351 315 Gene3D G3DSA:1.10.3470.10 4 314 2.3E-60 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_23290 32591a1f5527865bc9138acc2bd38351 315 Pfam PF01032 FecCD transport family 34 310 3.7E-55 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 UP17_23290 32591a1f5527865bc9138acc2bd38351 315 SUPERFAMILY SSF81345 8 310 1.31E-61 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_16005 885cf612fda03b7931194c6fca93dd40 331 SUPERFAMILY SSF52518 7 330 1.55E-104 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_16005 885cf612fda03b7931194c6fca93dd40 331 Gene3D G3DSA:3.40.50.970 1 331 1.1E-120 T 11-10-2018 UP17_16005 885cf612fda03b7931194c6fca93dd40 331 Pfam PF00676 Dehydrogenase E1 component 20 320 1.0E-107 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 UP17_08160 f5be68aa3b026303fb8888f679775263 410 SUPERFAMILY SSF53218 2 206 3.4E-36 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily UP17_08160 f5be68aa3b026303fb8888f679775263 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 160.192 T 11-10-2018 IPR008135 Competence-induced protein CinA UP17_08160 f5be68aa3b026303fb8888f679775263 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 160 6.6E-32 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_08160 f5be68aa3b026303fb8888f679775263 410 Gene3D G3DSA:3.90.950.20 251 410 6.7E-54 T 11-10-2018 IPR036653 CinA-like, C-terminal UP17_08160 f5be68aa3b026303fb8888f679775263 410 SMART SM00852 4 170 1.2E-40 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_08160 f5be68aa3b026303fb8888f679775263 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 410 5.8E-146 T 11-10-2018 IPR008135 Competence-induced protein CinA UP17_08160 f5be68aa3b026303fb8888f679775263 410 Pfam PF02464 Competence-damaged protein 257 408 8.2E-52 T 11-10-2018 IPR008136 CinA, C-terminal UP17_08160 f5be68aa3b026303fb8888f679775263 410 Pfam PF00994 Probable molybdopterin binding domain 4 163 4.4E-35 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_08160 f5be68aa3b026303fb8888f679775263 410 Gene3D G3DSA:3.40.980.10 2 168 9.0E-51 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily UP17_08160 f5be68aa3b026303fb8888f679775263 410 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 265 410 1.5E-45 T 11-10-2018 IPR008136 CinA, C-terminal UP17_08160 f5be68aa3b026303fb8888f679775263 410 SUPERFAMILY SSF142433 250 408 2.35E-50 T 11-10-2018 IPR036653 CinA-like, C-terminal UP17_08160 f5be68aa3b026303fb8888f679775263 410 PIRSF PIRSF006728 1 410 7.7E-157 T 11-10-2018 IPR008135 Competence-induced protein CinA UP17_19200 1eec81976f2fce996546d67eda4737bd 199 Pfam PF12833 Helix-turn-helix domain 105 183 1.4E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 PIRSF PIRSF000408 5 190 6.0E-76 T 11-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA UP17_19200 1eec81976f2fce996546d67eda4737bd 199 Gene3D G3DSA:1.10.10.60 80 132 2.3E-16 T 11-10-2018 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 Gene3D G3DSA:1.10.10.60 133 189 1.2E-17 T 11-10-2018 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 SUPERFAMILY SSF46689 135 186 2.11E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 Pfam PF02805 Metal binding domain of Ada 12 75 1.8E-29 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 Gene3D G3DSA:3.40.10.10 9 77 1.1E-29 T 11-10-2018 IPR035451 Ada-like domain superfamily UP17_19200 1eec81976f2fce996546d67eda4737bd 199 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 166 182 1.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 151 166 1.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 SUPERFAMILY SSF46689 83 133 1.25E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 178 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 SMART SM00342 99 182 1.1E-31 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_19200 1eec81976f2fce996546d67eda4737bd 199 SUPERFAMILY SSF57884 10 88 4.97E-29 T 11-10-2018 IPR035451 Ada-like domain superfamily UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 SUPERFAMILY SSF53244 296 424 5.49E-23 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 142 157 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 Gene3D G3DSA:3.90.190.20 296 428 2.1E-28 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 Pfam PF02875 Mur ligase family, glutamate ligase domain 294 364 2.5E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 Gene3D G3DSA:3.40.1190.10 1 295 3.4E-93 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 SUPERFAMILY SSF53623 4 294 2.34E-86 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 PIRSF PIRSF001563 1 429 1.5E-140 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 Pfam PF08245 Mur ligase middle domain 47 273 3.3E-15 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UP17_17610 9b077341ba97c260d8b1e82c75f504cb 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 423 1.8E-113 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 UP17_11550 6454754b490af5c8b0ca94cd548d5216 353 Pfam PF13037 Domain of unknown function (DUF3898) 261 349 1.3E-38 T 11-10-2018 IPR025012 Domain of unknown function DUF3898 UP17_11550 6454754b490af5c8b0ca94cd548d5216 353 Pfam PF13039 Protein of unknown function (DUF3900) 2 254 1.2E-133 T 11-10-2018 IPR025006 Protein of unknown function DUF3900 UP17_12990 8a58291c3eecbb55e2e0f50aa639c345 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12990 8a58291c3eecbb55e2e0f50aa639c345 295 Pfam PF01680 SOR/SNZ family 9 213 3.9E-106 T 11-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12990 8a58291c3eecbb55e2e0f50aa639c345 295 PIRSF PIRSF029271 1 295 1.7E-150 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12990 8a58291c3eecbb55e2e0f50aa639c345 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 52.606 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12990 8a58291c3eecbb55e2e0f50aa639c345 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 2.8E-153 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12990 8a58291c3eecbb55e2e0f50aa639c345 295 Gene3D G3DSA:3.20.20.70 1 295 7.3E-145 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_12990 8a58291c3eecbb55e2e0f50aa639c345 295 SUPERFAMILY SSF51366 19 270 7.06E-70 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 896 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:3.90.1100.10 607 671 5.5E-19 T 11-10-2018 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:2.40.270.10 752 790 5.7E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:2.40.270.10 981 1047 1.9E-23 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:3.90.1110.10 155 261 8.1E-8 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Pfam PF04563 RNA polymerase beta subunit 28 454 3.7E-30 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Pfam PF00562 RNA polymerase Rpb2, domain 6 676 1069 5.6E-164 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:3.90.1100.10 20 154 9.3E-54 T 11-10-2018 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1145 1.8E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 286 5.4E-24 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Pfam PF04561 RNA polymerase Rpb2, domain 2 374 410 7.2E-6 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 SUPERFAMILY SSF64484 13 1156 0.0 T 11-10-2018 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Pfam PF04565 RNA polymerase Rpb2, domain 3 469 537 1.3E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:2.40.50.150 791 930 3.1E-60 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Pfam PF10385 RNA polymerase beta subunit external 1 domain 547 614 5.9E-25 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.589 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:2.40.50.100 672 751 6.5E-27 T 11-10-2018 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:3.90.1100.10 389 583 5.7E-75 T 11-10-2018 UP17_00650 2b7231f9afea2f7b5c7e0f45232c99a5 1189 Gene3D G3DSA:3.90.1800.10 1057 1110 1.1E-10 T 11-10-2018 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 445 1.2E-22 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 488 550 1.3E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 218 313 2.6E-22 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 SUPERFAMILY SSF53738 31 219 1.65E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 7.8E-41 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Gene3D G3DSA:3.40.120.10 209 323 2.6E-21 T 11-10-2018 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 SUPERFAMILY SSF53738 304 454 4.32E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 SUPERFAMILY SSF55957 448 567 2.35E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Gene3D G3DSA:3.40.120.10 33 191 3.3E-47 T 11-10-2018 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Gene3D G3DSA:3.40.120.10 324 452 1.3E-37 T 11-10-2018 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 Gene3D G3DSA:3.30.310.50 480 566 3.1E-8 T 11-10-2018 UP17_04680 2396c2a46aebcbfecef3a12ded95ae26 576 SUPERFAMILY SSF53738 221 315 2.28E-18 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_05775 7a0c80b8939457966a1b14db3c630df1 615 Gene3D G3DSA:3.60.20.10 2 184 6.6E-61 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_05775 7a0c80b8939457966a1b14db3c630df1 615 Pfam PF00733 Asparagine synthase 242 587 3.3E-94 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 UP17_05775 7a0c80b8939457966a1b14db3c630df1 615 SUPERFAMILY SSF52402 231 575 3.63E-72 T 11-10-2018 UP17_05775 7a0c80b8939457966a1b14db3c630df1 615 Pfam PF13537 Glutamine amidotransferase domain 48 169 8.3E-44 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain UP17_05775 7a0c80b8939457966a1b14db3c630df1 615 SUPERFAMILY SSF56235 1 226 1.37E-61 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_05775 7a0c80b8939457966a1b14db3c630df1 615 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 534 1.1E-165 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 UP17_05775 7a0c80b8939457966a1b14db3c630df1 615 PIRSF PIRSF001589 1 609 4.7E-145 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 UP17_07670 89997538f65edc749af595467af8aacc 186 SUPERFAMILY SSF51306 26 184 1.17E-52 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily UP17_07670 89997538f65edc749af595467af8aacc 186 Gene3D G3DSA:2.10.109.10 58 185 3.2E-43 T 11-10-2018 UP17_07670 89997538f65edc749af595467af8aacc 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 2.0E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_07670 89997538f65edc749af595467af8aacc 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 78 90 2.0E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_07670 89997538f65edc749af595467af8aacc 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 2.0E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_07670 89997538f65edc749af595467af8aacc 186 ProSitePatterns PS00760 Signal peptidases I lysine active site. 80 92 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 UP17_07670 89997538f65edc749af595467af8aacc 186 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 179 3.6E-53 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_07670 89997538f65edc749af595467af8aacc 186 Pfam PF00717 Peptidase S24-like 35 102 7.7E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C UP17_07670 89997538f65edc749af595467af8aacc 186 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 UP17_07670 89997538f65edc749af595467af8aacc 186 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 UP17_20310 e22f00229bde536aa996419052ca97cd 447 Gene3D G3DSA:1.10.287.130 181 300 7.9E-27 T 11-10-2018 UP17_20310 e22f00229bde536aa996419052ca97cd 447 Gene3D G3DSA:3.30.565.10 302 447 2.7E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20310 e22f00229bde536aa996419052ca97cd 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 1.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20310 e22f00229bde536aa996419052ca97cd 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20310 e22f00229bde536aa996419052ca97cd 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 1.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20310 e22f00229bde536aa996419052ca97cd 447 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 1.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20310 e22f00229bde536aa996419052ca97cd 447 SMART SM00388 232 299 1.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_20310 e22f00229bde536aa996419052ca97cd 447 SUPERFAMILY SSF55874 290 446 1.44E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20310 e22f00229bde536aa996419052ca97cd 447 SMART SM00304 177 231 8.8E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_20310 e22f00229bde536aa996419052ca97cd 447 SMART SM00387 340 447 2.5E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_20310 e22f00229bde536aa996419052ca97cd 447 Pfam PF00672 HAMP domain 179 227 1.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_20310 e22f00229bde536aa996419052ca97cd 447 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 445 5.4E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_20310 e22f00229bde536aa996419052ca97cd 447 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 297 1.6E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_20310 e22f00229bde536aa996419052ca97cd 447 SUPERFAMILY SSF158472 178 228 9.29E-5 T 11-10-2018 UP17_20310 e22f00229bde536aa996419052ca97cd 447 SUPERFAMILY SSF47384 217 297 2.35E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 Gene3D G3DSA:3.40.50.720 191 424 3.1E-83 T 11-10-2018 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 109 122 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 SMART SM00839 192 421 3.2E-89 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 Gene3D G3DSA:1.10.8.1210 21 41 3.1E-78 T 11-10-2018 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 44 171 4.1E-53 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 Gene3D G3DSA:3.40.50.10860 42 177 3.1E-78 T 11-10-2018 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 SUPERFAMILY SSF53223 12 192 2.14E-63 T 11-10-2018 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 SUPERFAMILY SSF51735 190 423 2.74E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 PIRSF PIRSF000185 9 424 4.1E-159 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 101 115 3.5E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 181 203 3.5E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 223 243 3.5E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 349 360 3.5E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_14895 e4fc43f8621bda8560aa4a36495f7ecc 425 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 190 421 1.6E-71 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 Gene3D G3DSA:3.30.465.10 348 429 6.0E-15 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 SUPERFAMILY SSF54631 204 341 1.24E-31 T 11-10-2018 UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 Gene3D G3DSA:3.10.580.10 195 347 2.5E-49 T 11-10-2018 UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 Pfam PF03471 Transporter associated domain 355 427 1.8E-14 T 11-10-2018 IPR005170 Transporter-associated domain UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 Pfam PF01595 Domain of unknown function DUF21 8 201 8.9E-49 T 11-10-2018 IPR002550 CNNM, transmembrane domain UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 Pfam PF00571 CBS domain 289 338 5.2E-4 T 11-10-2018 IPR000644 CBS domain UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 Pfam PF00571 CBS domain 217 271 5.6E-7 T 11-10-2018 IPR000644 CBS domain UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 SMART SM00116 290 338 12.0 T 11-10-2018 IPR000644 CBS domain UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 SMART SM00116 225 274 0.059 T 11-10-2018 IPR000644 CBS domain UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 SMART SM01091 354 431 8.3E-19 T 11-10-2018 IPR005170 Transporter-associated domain UP17_05140 45507c716f8f1fe222dd16bb39b26550 450 SUPERFAMILY SSF56176 352 433 2.4E-16 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Gene3D G3DSA:3.40.50.300 9 194 5.4E-74 T 11-10-2018 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Gene3D G3DSA:2.40.30.10 195 294 4.8E-34 T 11-10-2018 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 4.2E-51 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 SUPERFAMILY SSF50447 175 297 4.37E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 SUPERFAMILY SSF54980 301 379 4.32E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 SUPERFAMILY SSF54980 408 503 5.28E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 307.571 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Gene3D G3DSA:3.30.70.3380 377 488 9.0E-43 T 11-10-2018 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Gene3D G3DSA:3.30.70.870 295 376 2.0E-36 T 11-10-2018 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 1.2E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 SUPERFAMILY SSF52540 9 214 1.14E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.1E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 184 1.9E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Gene3D G3DSA:3.30.70.2570 489 563 3.7E-34 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 Pfam PF00679 Elongation factor G C-terminus 408 495 5.3E-25 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like UP17_16790 f09e3967cf2110966d4a0ff2664a50a2 611 SMART SM00838 410 495 0.0012 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PIRSF PIRSF000724 1 394 8.6E-160 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 SUPERFAMILY SSF53748 1 393 3.3E-163 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 2.6E-98 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 Pfam PF00162 Phosphoglycerate kinase 6 383 6.8E-168 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 Gene3D G3DSA:3.40.50.1260 169 383 1.0E-168 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 393 43.431 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23470 2852731c8fca3b507002592b2d6c73ed 394 Gene3D G3DSA:3.40.50.1260 8 391 1.0E-168 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 Pfam PF00515 Tetratricopeptide repeat 466 497 4.6E-7 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 SUPERFAMILY SSF48452 396 511 1.02E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 Pfam PF13181 Tetratricopeptide repeat 433 463 8.3E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 Pfam PF01694 Rhomboid family 223 358 2.0E-33 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 Gene3D G3DSA:1.20.1540.10 174 366 5.1E-48 T 11-10-2018 IPR035952 Rhomboid-like superfamily UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 Gene3D G3DSA:1.25.40.10 387 512 6.2E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 SMART SM00028 465 498 5.0E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 SMART SM00028 431 464 0.016 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_16470 92e1afb6ae808a10fab0585d7806636c 512 SUPERFAMILY SSF144091 179 359 6.28E-45 T 11-10-2018 UP17_12545 f025b912573018437d3b1ff00147c0a5 211 Pfam PF13021 Domain of unknown function (DUF3885) 169 206 1.8E-20 T 11-10-2018 IPR024976 Domain of unknown function DUF3885 UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 SMART SM00567 E-Z type HEAT repeats 280 309 150.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 SMART SM00567 E-Z type HEAT repeats 249 278 0.57 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 SMART SM00567 E-Z type HEAT repeats 311 340 0.055 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 Gene3D G3DSA:1.25.10.10 189 375 4.1E-24 T 11-10-2018 IPR011989 Armadillo-like helical UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 Gene3D G3DSA:3.30.1370.70 1 92 8.2E-29 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 Pfam PF13769 Virulence factor 108 188 7.4E-29 T 11-10-2018 IPR025989 Virulence factor domain UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 SUPERFAMILY SSF48371 201 372 8.64E-31 T 11-10-2018 IPR016024 Armadillo-type fold UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 87 9.7E-22 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 Pfam PF13646 HEAT repeats 270 341 2.9E-9 T 11-10-2018 UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 SMART SM00932 4 90 3.7E-30 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal UP17_14420 81f8f3996b8d2324fb25e4abdd2c59f1 378 SUPERFAMILY SSF110836 2 88 6.54E-24 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily UP17_00835 a081f7a4fff86338cc670f92bc73bc22 288 SUPERFAMILY SSF52540 1 241 3.22E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00835 a081f7a4fff86338cc670f92bc73bc22 288 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_00835 a081f7a4fff86338cc670f92bc73bc22 288 Gene3D G3DSA:3.40.50.300 1 268 1.5E-76 T 11-10-2018 UP17_00835 a081f7a4fff86338cc670f92bc73bc22 288 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 280 5.5E-120 T 11-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 UP17_00835 a081f7a4fff86338cc670f92bc73bc22 288 SMART SM00382 32 223 1.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_00835 a081f7a4fff86338cc670f92bc73bc22 288 Pfam PF00005 ABC transporter 23 174 2.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_14090 16bf0e46c82e6e6591dc24848cf7672e 451 PIRSF PIRSF006603 1 451 7.0E-69 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_14090 16bf0e46c82e6e6591dc24848cf7672e 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 3.1E-104 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_14090 16bf0e46c82e6e6591dc24848cf7672e 451 Pfam PF01554 MatE 247 407 7.3E-36 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_14090 16bf0e46c82e6e6591dc24848cf7672e 451 Pfam PF01554 MatE 20 180 1.2E-32 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 Gene3D G3DSA:1.20.990.10 280 389 1.7E-67 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00369 Flavodoxin signature 68 81 6.0E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00369 Flavodoxin signature 116 127 6.0E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00369 Flavodoxin signature 172 191 6.0E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00369 Flavodoxin signature 148 158 6.0E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 Gene3D G3DSA:3.40.50.360 58 218 9.7E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_11045 e033f28c24d8f545f06566121a0d9885 604 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 6 604 4.8E-257 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 SUPERFAMILY SSF52343 449 604 4.45E-50 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 3.1E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 391 398 3.1E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 486 495 3.1E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 530 546 3.1E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 461 480 3.1E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 553 561 3.1E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 499 510 3.1E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 Gene3D G3DSA:2.40.30.10 232 444 1.7E-67 T 11-10-2018 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 Pfam PF00175 Oxidoreductase NAD-binding domain 462 568 5.8E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 Pfam PF00667 FAD binding domain 232 427 1.5E-30 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 SUPERFAMILY SSF52218 65 209 5.71E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_11045 e033f28c24d8f545f06566121a0d9885 604 Pfam PF00258 Flavodoxin 69 192 7.1E-33 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 PIRSF PIRSF000207 1 604 2.4E-255 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11045 e033f28c24d8f545f06566121a0d9885 604 Gene3D G3DSA:3.40.50.80 450 604 1.0E-58 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_11045 e033f28c24d8f545f06566121a0d9885 604 SUPERFAMILY SSF63380 230 450 5.57E-60 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel UP17_17650 d7e1de1c71676b99b538334912809f7f 331 PIRSF PIRSF001415 1 328 1.4E-154 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 SMART SM01004 4 325 3.6E-234 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 244 256 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 1.4E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 244 260 1.4E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 299 318 1.4E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 1.4E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 154 173 1.4E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 269 284 1.4E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 324 7.1E-151 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 Gene3D G3DSA:3.20.20.70 2 331 2.2E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_17650 d7e1de1c71676b99b538334912809f7f 331 SUPERFAMILY SSF51569 4 327 5.13E-142 T 11-10-2018 UP17_09880 669c174f4a1d0803cb4975324de27b57 440 Gene3D G3DSA:1.20.1250.20 3 205 5.3E-33 T 11-10-2018 UP17_09880 669c174f4a1d0803cb4975324de27b57 440 Gene3D G3DSA:1.20.1250.20 229 435 6.5E-34 T 11-10-2018 UP17_09880 669c174f4a1d0803cb4975324de27b57 440 SUPERFAMILY SSF103473 4 430 1.83E-72 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_09880 669c174f4a1d0803cb4975324de27b57 440 Pfam PF07690 Major Facilitator Superfamily 14 390 1.2E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_09880 669c174f4a1d0803cb4975324de27b57 440 PIRSF PIRSF002808 3 438 8.9E-34 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 UP17_05295 8d03ff996b1fa9f1aaa0cb9f0bb57146 263 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 8 229 1.9E-35 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 UP17_05295 8d03ff996b1fa9f1aaa0cb9f0bb57146 263 Gene3D G3DSA:3.60.160.10 1 251 1.3E-102 T 11-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily UP17_05295 8d03ff996b1fa9f1aaa0cb9f0bb57146 263 Pfam PF01987 Mitochondrial biogenesis AIM24 8 226 1.9E-67 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 UP17_05295 8d03ff996b1fa9f1aaa0cb9f0bb57146 263 SUPERFAMILY SSF51219 6 246 6.54E-85 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily UP17_10615 82fce8d9a3119aabb9102438f0f7a3ae 339 Gene3D G3DSA:3.40.50.720 1 250 1.9E-69 T 11-10-2018 UP17_10615 82fce8d9a3119aabb9102438f0f7a3ae 339 SUPERFAMILY SSF69572 3 330 1.44E-81 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 UP17_10615 82fce8d9a3119aabb9102438f0f7a3ae 339 Pfam PF00899 ThiF family 5 241 2.2E-55 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 UP17_05285 11a283528a2b6110348a1fac359d68f5 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 1.1E-64 T 11-10-2018 UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 6.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.3E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05285 11a283528a2b6110348a1fac359d68f5 249 SUPERFAMILY SSF51735 5 243 6.94E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_05285 11a283528a2b6110348a1fac359d68f5 249 Gene3D G3DSA:3.40.50.720 5 243 2.4E-73 T 11-10-2018 UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 SUPERFAMILY SSF53187 5 390 2.99E-77 T 11-10-2018 UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 Gene3D G3DSA:3.30.70.360 183 297 1.0E-132 T 11-10-2018 UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 Gene3D G3DSA:3.40.630.10 12 375 1.0E-132 T 11-10-2018 UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 PIRSF PIRSF005962 1 394 5.6E-126 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 Pfam PF01546 Peptidase family M20/M25/M40 74 386 2.7E-29 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 Pfam PF07687 Peptidase dimerisation domain 187 281 1.3E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 SUPERFAMILY SSF55031 183 301 1.83E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_14855 c33d07a6c1e48f19f270cd39a8b34deb 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 378 1.1E-111 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Gene3D G3DSA:3.30.450.20 32 172 9.4E-45 T 11-10-2018 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 SMART SM00387 420 528 3.6E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 526 1.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 2.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 323 374 1.6E-11 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Gene3D G3DSA:1.10.287.130 314 377 2.1E-5 T 11-10-2018 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Pfam PF00989 PAS fold 214 313 9.9E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Pfam PF17203 Single cache domain 3 37 169 2.1E-25 T 11-10-2018 IPR033463 Single cache domain 3 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 SUPERFAMILY SSF55785 216 309 6.28E-8 T 11-10-2018 IPR035965 PAS domain superfamily UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Gene3D G3DSA:3.30.565.10 390 530 1.9E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 Gene3D G3DSA:3.30.450.20 200 313 1.5E-24 T 11-10-2018 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 SMART SM00091 213 281 4.5E-4 T 11-10-2018 IPR000014 PAS domain UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 SUPERFAMILY SSF55890 324 393 9.02E-15 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 SUPERFAMILY SSF103190 39 168 6.67E-38 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_14645 b3bb5617d4d5cf3e787171ea57ef5667 533 SUPERFAMILY SSF55874 407 525 1.57E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06420 acc6dc8e4ee0126a4afc1556fada4771 495 Gene3D G3DSA:3.40.605.10 24 487 1.3E-202 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_06420 acc6dc8e4ee0126a4afc1556fada4771 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_06420 acc6dc8e4ee0126a4afc1556fada4771 495 Gene3D G3DSA:3.40.309.10 270 459 1.3E-202 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_06420 acc6dc8e4ee0126a4afc1556fada4771 495 SUPERFAMILY SSF53720 14 493 6.41E-184 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_06420 acc6dc8e4ee0126a4afc1556fada4771 495 Pfam PF00171 Aldehyde dehydrogenase family 28 489 9.7E-191 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_09060 9ad3ce49ffc2ee701ea7038a351fa2a4 185 Pfam PF13302 Acetyltransferase (GNAT) domain 12 152 3.2E-31 T 11-10-2018 IPR000182 GNAT domain UP17_09060 9ad3ce49ffc2ee701ea7038a351fa2a4 185 SUPERFAMILY SSF55729 5 176 4.22E-50 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_09060 9ad3ce49ffc2ee701ea7038a351fa2a4 185 Gene3D G3DSA:3.40.630.30 2 183 9.3E-46 T 11-10-2018 UP17_17040 64367b6075c4f93edef6fe1cf0265744 188 SUPERFAMILY SSF140478 26 173 3.79E-57 T 11-10-2018 IPR023353 LemA-like domain superfamily UP17_17040 64367b6075c4f93edef6fe1cf0265744 188 Pfam PF04011 LemA family 7 184 3.0E-74 T 11-10-2018 IPR007156 LemA UP17_17040 64367b6075c4f93edef6fe1cf0265744 188 Gene3D G3DSA:1.20.1440.20 17 184 1.5E-71 T 11-10-2018 IPR023353 LemA-like domain superfamily UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 Pfam PF00710 Asparaginase, N-terminal 3 192 2.7E-52 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 SMART SM00870 3 318 5.2E-111 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 PIRSF PIRSF500176 1 320 2.9E-88 T 11-10-2018 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 SUPERFAMILY SSF53774 1 316 2.88E-88 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 PIRSF PIRSF001220 1 320 2.1E-92 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 Gene3D G3DSA:3.40.50.1170 1 207 1.8E-61 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 Gene3D G3DSA:3.40.50.40 208 319 4.0E-27 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.3E-19 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 2.3E-19 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_15530 6aaa33e9a2f54e41f80f40c056bd0502 320 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 2.3E-19 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_12900 8000ccc5aff9f3390682162bcbf319fc 172 Gene3D G3DSA:3.40.470.10 4 168 3.3E-61 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_12900 8000ccc5aff9f3390682162bcbf319fc 172 Pfam PF03167 Uracil DNA glycosylase superfamily 7 150 3.8E-21 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_12900 8000ccc5aff9f3390682162bcbf319fc 172 SUPERFAMILY SSF52141 4 162 7.52E-40 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_02885 71628f89bacbc83dbd7df98226b225b7 202 Gene3D G3DSA:1.10.10.10 1 101 1.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_02885 71628f89bacbc83dbd7df98226b225b7 202 SUPERFAMILY SSF46785 4 171 4.55E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_02885 71628f89bacbc83dbd7df98226b225b7 202 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.5E-15 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_06220 50e45aab2e04946808eee3cb0030da44 337 Gene3D G3DSA:3.40.190.10 36 163 2.3E-18 T 11-10-2018 UP17_06220 50e45aab2e04946808eee3cb0030da44 337 SUPERFAMILY SSF53850 36 267 7.26E-40 T 11-10-2018 UP17_06220 50e45aab2e04946808eee3cb0030da44 337 Pfam PF13379 NMT1-like family 35 268 1.2E-27 T 11-10-2018 UP17_06220 50e45aab2e04946808eee3cb0030da44 337 Gene3D G3DSA:3.40.190.10 164 332 1.7E-21 T 11-10-2018 UP17_06220 50e45aab2e04946808eee3cb0030da44 337 SMART SM00062 38 277 0.0058 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_06220 50e45aab2e04946808eee3cb0030da44 337 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 39 332 7.8E-63 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 SUPERFAMILY SSF56235 9 231 1.2E-67 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 Pfam PF13537 Glutamine amidotransferase domain 87 206 9.4E-21 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 Gene3D G3DSA:3.40.50.2020 267 432 1.6E-159 T 11-10-2018 UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 Gene3D G3DSA:3.60.20.10 9 454 1.6E-159 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 8 452 44.63 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 9 453 8.5E-160 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 PIRSF PIRSF000485 5 456 1.1E-170 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 SUPERFAMILY SSF53271 243 455 3.77E-64 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_17120 ce05c950ed854cd593775f6c8788ff9d 456 Pfam PF00156 Phosphoribosyl transferase domain 264 378 1.2E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_14085 032bf153e4f0f6bf3e57aa2ab930655b 357 Gene3D G3DSA:3.30.70.100 238 335 1.4E-13 T 11-10-2018 UP17_14085 032bf153e4f0f6bf3e57aa2ab930655b 357 Gene3D G3DSA:2.30.30.60 187 236 1.3E-13 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily UP17_14085 032bf153e4f0f6bf3e57aa2ab930655b 357 Pfam PF00924 Mechanosensitive ion channel 129 331 1.3E-60 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 UP17_14085 032bf153e4f0f6bf3e57aa2ab930655b 357 SUPERFAMILY SSF50182 171 237 1.31E-18 T 11-10-2018 IPR010920 LSM domain superfamily UP17_14085 032bf153e4f0f6bf3e57aa2ab930655b 357 SUPERFAMILY SSF82689 239 341 1.96E-13 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 UP17_14085 032bf153e4f0f6bf3e57aa2ab930655b 357 SUPERFAMILY SSF82861 86 170 1.31E-10 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 Gene3D G3DSA:3.30.160.20 186 281 2.5E-96 T 11-10-2018 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 Pfam PF03462 PCRF domain 1 179 2.9E-59 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 Pfam PF00472 RF-1 domain 189 298 3.2E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 Gene3D G3DSA:3.30.70.1660 90 319 2.5E-96 T 11-10-2018 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 325 2.3E-167 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 326 37.266 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 SUPERFAMILY SSF75620 1 323 5.1E-134 T 11-10-2018 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 Gene3D G3DSA:1.20.58.410 1 76 9.5E-17 T 11-10-2018 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 SMART SM00937 45 155 2.3E-57 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 UP17_23700 62b76d9a9ecce9b92535d47e5bac4b8a 326 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 205 221 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UP17_09795 51f02cf8ff79b80f8d07fc405598bf0d 159 SUPERFAMILY SSF46785 9 149 3.05E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09795 51f02cf8ff79b80f8d07fc405598bf0d 159 Gene3D G3DSA:1.10.10.10 1 149 1.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09795 51f02cf8ff79b80f8d07fc405598bf0d 159 SMART SM00347 30 132 4.2E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_09795 51f02cf8ff79b80f8d07fc405598bf0d 159 Pfam PF01047 MarR family 37 95 4.2E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_00445 3cf3f65d4ba5ab5feef5f99601302ca0 332 Gene3D G3DSA:3.20.20.70 7 251 1.1E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_00445 3cf3f65d4ba5ab5feef5f99601302ca0 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 319 4.0E-131 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 UP17_00445 3cf3f65d4ba5ab5feef5f99601302ca0 332 Gene3D G3DSA:1.10.1200.80 254 330 2.8E-16 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 UP17_00445 3cf3f65d4ba5ab5feef5f99601302ca0 332 SUPERFAMILY SSF51395 11 316 3.66E-87 T 11-10-2018 UP17_00445 3cf3f65d4ba5ab5feef5f99601302ca0 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 UP17_00445 3cf3f65d4ba5ab5feef5f99601302ca0 332 PIRSF PIRSF006621 1 330 7.0E-104 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 UP17_00445 3cf3f65d4ba5ab5feef5f99601302ca0 332 Pfam PF01207 Dihydrouridine synthase (Dus) 14 314 1.2E-105 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 UP17_01735 eb7df149aadc62a359ad8cf1adb88fc0 524 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 45 513 3.4E-184 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_01735 eb7df149aadc62a359ad8cf1adb88fc0 524 PIRSF PIRSF005690 29 524 9.0E-184 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 SUPERFAMILY SSF52374 6 352 1.39E-119 T 11-10-2018 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 SUPERFAMILY SSF47323 355 566 6.54E-46 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Gene3D G3DSA:3.40.50.620 8 338 5.9E-157 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Pfam PF01588 Putative tRNA binding domain 559 651 2.3E-27 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 228 239 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Hamap MF_01228 Methionine--tRNA ligase [metG]. 2 514 52.268 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Pfam PF08264 Anticodon-binding domain of tRNA 395 497 2.2E-7 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 534 653 7.3E-47 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Gene3D G3DSA:1.10.730.10 343 513 1.4E-51 T 11-10-2018 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Pfam PF09334 tRNA synthetases class I (M) 8 365 2.7E-125 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Gene3D G3DSA:2.40.50.140 545 653 6.3E-36 T 11-10-2018 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 Gene3D G3DSA:2.170.220.10 119 230 5.9E-157 T 11-10-2018 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 515 1.1E-182 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 UP17_00230 0ac7493811bfa5b6dfd3e359f2fd1459 653 SUPERFAMILY SSF50249 547 652 6.12E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_10525 80812ae647008f2d41de221e7411a892 339 SUPERFAMILY SSF51569 2 266 1.83E-62 T 11-10-2018 UP17_10525 80812ae647008f2d41de221e7411a892 339 Pfam PF07836 DmpG-like communication domain 271 331 4.9E-30 T 11-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 UP17_10525 80812ae647008f2d41de221e7411a892 339 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 4 332 9.3E-150 T 11-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 UP17_10525 80812ae647008f2d41de221e7411a892 339 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 269 331 9.0E-20 T 11-10-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 UP17_10525 80812ae647008f2d41de221e7411a892 339 Gene3D G3DSA:3.20.20.70 2 265 1.3E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_10525 80812ae647008f2d41de221e7411a892 339 SUPERFAMILY SSF89000 285 332 3.49E-17 T 11-10-2018 UP17_10525 80812ae647008f2d41de221e7411a892 339 Pfam PF00682 HMGL-like 7 260 1.0E-54 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 UP17_10525 80812ae647008f2d41de221e7411a892 339 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 339 163.002 T 11-10-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 UP17_10525 80812ae647008f2d41de221e7411a892 339 Gene3D G3DSA:1.10.8.60 272 338 2.1E-28 T 11-10-2018 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 SMART SM00028 158 191 10.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 SMART SM00028 116 149 83.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 SMART SM00028 201 234 130.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 SMART SM00028 241 274 23.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 SUPERFAMILY SSF47413 5 64 5.07E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 Pfam PF12844 Helix-turn-helix domain 7 65 1.7E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 SUPERFAMILY SSF48452 112 267 3.03E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 Pfam PF13181 Tetratricopeptide repeat 241 267 0.011 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 Pfam PF13181 Tetratricopeptide repeat 119 145 0.037 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 Gene3D G3DSA:1.25.40.10 4 296 6.5E-86 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_23945 01034d732fea47bfcf49f5accd19f047 297 SMART SM00530 9 63 2.8E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 21 29 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 322 565 6.4E-79 T 11-10-2018 IPR014145 DNA ligase D, polymerase domain UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 Gene3D G3DSA:3.90.920.30 333 599 1.0E-72 T 11-10-2018 UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 181 205 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 SUPERFAMILY SSF56091 2 205 9.21E-33 T 11-10-2018 UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 Pfam PF01068 ATP dependent DNA ligase domain 15 205 2.9E-32 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 13 593 7.3E-165 T 11-10-2018 IPR014143 DNA ligase D UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 Gene3D G3DSA:2.40.50.140 210 309 3.8E-5 T 11-10-2018 UP17_14025 c12321370c31e6f8a1dd498cadc7260c 614 Gene3D G3DSA:3.30.470.30 1 205 1.8E-35 T 11-10-2018 UP17_02615 1b490e64b2dfae5e1f687bb7708b0a7a 378 Pfam PF00270 DEAD/DEAH box helicase 28 193 6.3E-41 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_02615 1b490e64b2dfae5e1f687bb7708b0a7a 378 SMART SM00490 255 336 3.4E-27 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_02615 1b490e64b2dfae5e1f687bb7708b0a7a 378 Gene3D G3DSA:3.40.50.300 210 371 7.1E-41 T 11-10-2018 UP17_02615 1b490e64b2dfae5e1f687bb7708b0a7a 378 SMART SM00487 23 216 3.2E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_02615 1b490e64b2dfae5e1f687bb7708b0a7a 378 SUPERFAMILY SSF52540 72 356 9.38E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02615 1b490e64b2dfae5e1f687bb7708b0a7a 378 Pfam PF00271 Helicase conserved C-terminal domain 232 336 6.4E-26 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_02615 1b490e64b2dfae5e1f687bb7708b0a7a 378 Gene3D G3DSA:3.40.50.300 9 209 6.3E-60 T 11-10-2018 UP17_04110 a50edaa51c94bfa7d2e3c7859791030a 593 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 136 559 1.9E-223 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 UP17_04110 a50edaa51c94bfa7d2e3c7859791030a 593 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 135 561 99.793 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 UP17_04110 a50edaa51c94bfa7d2e3c7859791030a 593 Pfam PF01964 Radical SAM ThiC family 136 556 3.9E-204 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 UP17_04110 a50edaa51c94bfa7d2e3c7859791030a 593 Pfam PF13667 ThiC-associated domain 17 93 3.5E-32 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 UP17_04110 a50edaa51c94bfa7d2e3c7859791030a 593 Gene3D G3DSA:3.20.20.540 179 492 1.8E-155 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 UP17_20945 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_20945 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_20945 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_20945 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_20945 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_20945 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_20945 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_24955 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_24955 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_24955 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_24955 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_24955 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_24955 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_24955 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_18615 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_18615 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_18615 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_18615 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_18615 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_18615 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_18615 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_25030 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_25030 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_25030 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_25030 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_25030 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_25030 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_25030 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_03200 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_03200 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_03200 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_03200 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_03200 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_03200 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_03200 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_22520 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_22520 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_22520 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_22520 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22520 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22520 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22520 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_02990 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_02990 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_02990 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_02990 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_02990 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_02990 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_02990 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_22605 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_22605 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_22605 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_22605 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22605 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22605 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22605 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_11380 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_11380 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_11380 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_11380 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_11380 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_11380 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_11380 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_21165 7ff7bf3eb63777d8baa5a2002cad345d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 2.7E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_21165 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_21165 7ff7bf3eb63777d8baa5a2002cad345d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_21165 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_21165 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_21165 7ff7bf3eb63777d8baa5a2002cad345d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_21165 7ff7bf3eb63777d8baa5a2002cad345d 420 SUPERFAMILY SSF56672 5 347 2.77E-57 T 11-10-2018 UP17_03355 22ca1d5b28eb9830edd3dfc9269e7031 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 4 200 3.9E-100 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 UP17_03355 22ca1d5b28eb9830edd3dfc9269e7031 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 2 200 46.094 T 11-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 UP17_03355 22ca1d5b28eb9830edd3dfc9269e7031 203 SUPERFAMILY SSF52540 3 195 6.07E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03355 22ca1d5b28eb9830edd3dfc9269e7031 203 Gene3D G3DSA:3.40.50.300 4 201 7.7E-49 T 11-10-2018 UP17_03355 22ca1d5b28eb9830edd3dfc9269e7031 203 PIRSF PIRSF005624 2 201 6.3E-47 T 11-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 UP17_03355 22ca1d5b28eb9830edd3dfc9269e7031 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 176 2.6E-37 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain UP17_08010 d6e669bd3656d5c72fb213212d7e3c8b 306 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 236 1.2E-10 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 UP17_08010 d6e669bd3656d5c72fb213212d7e3c8b 306 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 302 18.982 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_08010 d6e669bd3656d5c72fb213212d7e3c8b 306 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 178 3.2E-58 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 UP17_08010 d6e669bd3656d5c72fb213212d7e3c8b 306 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 215 1.0E-78 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_08010 d6e669bd3656d5c72fb213212d7e3c8b 306 Gene3D G3DSA:3.30.2350.10 1 236 9.4E-88 T 11-10-2018 UP17_08010 d6e669bd3656d5c72fb213212d7e3c8b 306 SUPERFAMILY SSF55120 2 235 4.03E-78 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_07000 b6f006ef19945daa922f7d28196ff49c 91 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 84 1.5E-35 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 UP17_07000 b6f006ef19945daa922f7d28196ff49c 91 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 83 2.0E-23 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 UP17_07000 b6f006ef19945daa922f7d28196ff49c 91 PIRSF PIRSF037260 1 91 2.4E-36 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 UP17_07000 b6f006ef19945daa922f7d28196ff49c 91 Gene3D G3DSA:1.10.220.80 12 91 2.4E-27 T 11-10-2018 IPR023324 BH2638-like superfamily UP17_07000 b6f006ef19945daa922f7d28196ff49c 91 SUPERFAMILY SSF158504 4 84 7.06E-32 T 11-10-2018 IPR023324 BH2638-like superfamily UP17_07000 b6f006ef19945daa922f7d28196ff49c 91 Hamap MF_01041 UPF0223 protein . 1 89 25.236 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 UP17_00785 3b5bf21e860847c0629fee02e3165841 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00785 3b5bf21e860847c0629fee02e3165841 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 2.9E-37 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P UP17_00785 3b5bf21e860847c0629fee02e3165841 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.3E-53 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00785 3b5bf21e860847c0629fee02e3165841 146 SUPERFAMILY SSF52080 4 143 1.28E-48 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily UP17_00785 3b5bf21e860847c0629fee02e3165841 146 Gene3D G3DSA:3.100.10.10 66 146 4.6E-26 T 11-10-2018 UP17_00785 3b5bf21e860847c0629fee02e3165841 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.221 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 3.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 SUPERFAMILY SSF51735 8 259 8.65E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15860 76f364abb418b06a225790369fd45614 271 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_15860 76f364abb418b06a225790369fd45614 271 Gene3D G3DSA:3.40.50.720 6 270 2.1E-71 T 11-10-2018 UP17_15860 76f364abb418b06a225790369fd45614 271 Pfam PF00106 short chain dehydrogenase 15 202 2.4E-55 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 PIRSF PIRSF000126 1 268 6.7E-60 T 11-10-2018 UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 4.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 4.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_15860 76f364abb418b06a225790369fd45614 271 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13195 2831716068415ab38a3b55709ef5f243 544 Gene3D G3DSA:3.40.190.10 46 527 2.2E-179 T 11-10-2018 UP17_13195 2831716068415ab38a3b55709ef5f243 544 SUPERFAMILY SSF53850 38 538 1.3E-142 T 11-10-2018 UP17_13195 2831716068415ab38a3b55709ef5f243 544 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 92 114 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site UP17_13195 2831716068415ab38a3b55709ef5f243 544 Gene3D G3DSA:3.90.76.10 76 198 2.2E-179 T 11-10-2018 UP17_13195 2831716068415ab38a3b55709ef5f243 544 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 461 1.6E-93 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain UP17_13195 2831716068415ab38a3b55709ef5f243 544 PIRSF PIRSF002741 2 544 5.1E-129 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 UP17_13195 2831716068415ab38a3b55709ef5f243 544 Gene3D G3DSA:3.10.105.10 300 516 2.2E-179 T 11-10-2018 UP17_22055 690c52afcae5be202e61d48e1bead68d 402 SUPERFAMILY SSF53756 1 399 7.33E-40 T 11-10-2018 UP17_22055 690c52afcae5be202e61d48e1bead68d 402 Gene3D G3DSA:3.40.50.2000 2 214 3.8E-20 T 11-10-2018 UP17_22055 690c52afcae5be202e61d48e1bead68d 402 Pfam PF13439 Glycosyltransferase Family 4 16 203 1.7E-13 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 UP17_22055 690c52afcae5be202e61d48e1bead68d 402 Pfam PF00534 Glycosyl transferases group 1 216 378 3.2E-12 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_22055 690c52afcae5be202e61d48e1bead68d 402 Gene3D G3DSA:3.40.50.2000 221 392 9.5E-19 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Gene3D G3DSA:3.30.470.90 73 314 1.3E-102 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Gene3D G3DSA:1.10.287.610 1 72 9.4E-26 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SUPERFAMILY SSF52113 593 667 1.16E-18 T 11-10-2018 IPR036420 BRCT domain superfamily UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Gene3D G3DSA:2.20.70.80 388 424 5.2E-11 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Hamap MF_01588 DNA ligase [ligA]. 4 666 53.15 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 663 4.2E-11 T 11-10-2018 IPR001357 BRCT domain UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Gene3D G3DSA:1.10.150.20 500 580 1.1E-26 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Gene3D G3DSA:1.10.150.20 427 499 6.2E-29 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SMART SM00292 592 668 1.1E-11 T 11-10-2018 IPR001357 BRCT domain UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 314 5.1E-132 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SUPERFAMILY SSF56091 4 314 4.93E-122 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 393 7.0E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SUPERFAMILY SSF50249 313 396 5.65E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 662 6.4E-274 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Gene3D G3DSA:3.40.50.10190 582 667 2.3E-25 T 11-10-2018 IPR036420 BRCT domain superfamily UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 403 429 6.1E-11 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SUPERFAMILY SSF47781 400 578 1.26E-61 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SMART SM00278 475 494 28.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SMART SM00278 441 460 840.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SMART SM00278 539 558 0.71 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Pfam PF12826 Helix-hairpin-helix motif 505 567 6.6E-24 T 11-10-2018 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 SMART SM00532 5 443 3.5E-283 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 PIRSF PIRSF001604 1 668 3.6E-258 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site UP17_02040 450b20b98b73242a3fcc4531396a38b8 668 Gene3D G3DSA:2.40.50.140 315 387 4.7E-31 T 11-10-2018 UP17_00205 d7a4589ba13478ac4478e98de7bf3a67 124 PIRSF PIRSF021439 1 124 8.2E-42 T 11-10-2018 IPR010377 Initiation control protein YabA GO:0006260 UP17_00205 d7a4589ba13478ac4478e98de7bf3a67 124 Hamap MF_01159 Initiation-control protein YabA. 1 123 25.047 T 11-10-2018 IPR010377 Initiation control protein YabA GO:0006260 UP17_00205 d7a4589ba13478ac4478e98de7bf3a67 124 Pfam PF06156 Initiation control protein YabA 2 119 3.1E-38 T 11-10-2018 IPR010377 Initiation control protein YabA GO:0006260 UP17_13175 b181a368d4f78b35a2076645de12bcc5 308 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_13175 b181a368d4f78b35a2076645de12bcc5 308 SUPERFAMILY SSF52540 1 241 3.31E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13175 b181a368d4f78b35a2076645de12bcc5 308 Gene3D G3DSA:3.40.50.300 1 308 5.1E-104 T 11-10-2018 UP17_13175 b181a368d4f78b35a2076645de12bcc5 308 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 221 286 1.9E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_13175 b181a368d4f78b35a2076645de12bcc5 308 SMART SM00382 27 219 3.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13175 b181a368d4f78b35a2076645de12bcc5 308 Pfam PF00005 ABC transporter 19 169 2.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13175 b181a368d4f78b35a2076645de12bcc5 308 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 220 306 2.3E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_10735 b67a97fc386725da01ac90d80d519a62 107 SUPERFAMILY SSF46785 12 103 3.5E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10735 b67a97fc386725da01ac90d80d519a62 107 Gene3D G3DSA:1.10.10.10 1 107 3.4E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10735 b67a97fc386725da01ac90d80d519a62 107 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 1.5E-22 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_02570 590c0835e5a63562e9c8e270f68b3f5a 227 Gene3D G3DSA:1.10.150.240 19 92 1.3E-33 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 UP17_02570 590c0835e5a63562e9c8e270f68b3f5a 227 SUPERFAMILY SSF56784 7 219 1.19E-36 T 11-10-2018 IPR036412 HAD-like superfamily UP17_02570 590c0835e5a63562e9c8e270f68b3f5a 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 189 2.7E-19 T 11-10-2018 UP17_02570 590c0835e5a63562e9c8e270f68b3f5a 227 Gene3D G3DSA:3.40.50.1000 8 204 1.3E-33 T 11-10-2018 IPR023214 HAD superfamily UP17_00560 bada843269a27f66dc0cdb413436d664 359 SMART SM00670 159 266 3.2E-13 T 11-10-2018 IPR002716 PIN domain UP17_00560 bada843269a27f66dc0cdb413436d664 359 Gene3D G3DSA:3.40.50.1010 155 290 1.1E-53 T 11-10-2018 UP17_00560 bada843269a27f66dc0cdb413436d664 359 Pfam PF01938 TRAM domain 290 343 9.1E-7 T 11-10-2018 IPR002792 TRAM domain UP17_00560 bada843269a27f66dc0cdb413436d664 359 SUPERFAMILY SSF88723 160 287 8.18E-24 T 11-10-2018 IPR029060 PIN-like domain superfamily UP17_14265 8a61651cf011b931acd89c32242d1141 461 Gene3D G3DSA:1.10.10.60 399 461 6.8E-14 T 11-10-2018 UP17_14265 8a61651cf011b931acd89c32242d1141 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_14265 8a61651cf011b931acd89c32242d1141 461 Pfam PF00989 PAS fold 12 104 1.3E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_14265 8a61651cf011b931acd89c32242d1141 461 SMART SM00382 178 321 3.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_14265 8a61651cf011b931acd89c32242d1141 461 SUPERFAMILY SSF52540 162 401 3.35E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_14265 8a61651cf011b931acd89c32242d1141 461 Gene3D G3DSA:1.10.8.60 330 398 1.0E-21 T 11-10-2018 UP17_14265 8a61651cf011b931acd89c32242d1141 461 Gene3D G3DSA:3.30.450.20 2 119 3.0E-14 T 11-10-2018 UP17_14265 8a61651cf011b931acd89c32242d1141 461 Pfam PF00158 Sigma-54 interaction domain 160 322 1.1E-59 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_14265 8a61651cf011b931acd89c32242d1141 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 5.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_14265 8a61651cf011b931acd89c32242d1141 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 461 5.7E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_14265 8a61651cf011b931acd89c32242d1141 461 Gene3D G3DSA:3.40.50.300 147 328 1.3E-56 T 11-10-2018 UP17_14265 8a61651cf011b931acd89c32242d1141 461 SUPERFAMILY SSF46689 413 460 4.6E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_14265 8a61651cf011b931acd89c32242d1141 461 Pfam PF02954 Bacterial regulatory protein, Fis family 422 460 9.8E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_14265 8a61651cf011b931acd89c32242d1141 461 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 129 1.1E-9 T 11-10-2018 IPR000014 PAS domain UP17_14265 8a61651cf011b931acd89c32242d1141 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 370 379 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_14265 8a61651cf011b931acd89c32242d1141 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 243 258 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_14265 8a61651cf011b931acd89c32242d1141 461 SUPERFAMILY SSF55785 10 113 2.27E-12 T 11-10-2018 IPR035965 PAS domain superfamily UP17_14265 8a61651cf011b931acd89c32242d1141 461 SMART SM00091 10 78 2.6E-4 T 11-10-2018 IPR000014 PAS domain UP17_22560 9466cb845a815bb71718e6a3b13186ee 128 SUPERFAMILY SSF54593 3 128 9.93E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_22560 9466cb845a815bb71718e6a3b13186ee 128 Gene3D G3DSA:3.10.180.10 2 128 1.7E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_22560 9466cb845a815bb71718e6a3b13186ee 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 125 9.6E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_00595 95a2d64dfb583953a78e5063eef487f1 140 Pfam PF00636 Ribonuclease III domain 17 116 2.6E-14 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 UP17_00595 95a2d64dfb583953a78e5063eef487f1 140 PIRSF PIRSF005520 1 139 7.4E-54 T 11-10-2018 IPR008226 Mini-ribonuclease 3 family UP17_00595 95a2d64dfb583953a78e5063eef487f1 140 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 7 133 31.046 T 11-10-2018 IPR008226 Mini-ribonuclease 3 family UP17_00595 95a2d64dfb583953a78e5063eef487f1 140 SUPERFAMILY SSF69065 9 133 5.76E-43 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 UP17_00595 95a2d64dfb583953a78e5063eef487f1 140 Gene3D G3DSA:1.10.1520.10 4 139 3.3E-50 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 UP17_00595 95a2d64dfb583953a78e5063eef487f1 140 SMART SM00535 1 137 3.5E-4 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 Gene3D G3DSA:3.90.230.10 1 248 1.1E-104 T 11-10-2018 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 SUPERFAMILY SSF55920 1 246 2.88E-85 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 6.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 6.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 6.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 6.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 Pfam PF00557 Metallopeptidase family M24 12 239 3.9E-55 T 11-10-2018 IPR000994 Peptidase M24 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 7.2E-95 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_02710 991cf8df7dcbd5e191e0b059adf042c0 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 39.593 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 SMART SM00963 31 112 1.6E-27 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 Pfam PF02881 SRP54-type protein, helical bundle domain 42 108 6.8E-15 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 55 330 65.119 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 Gene3D G3DSA:1.20.120.140 29 327 3.9E-116 T 11-10-2018 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 303 316 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 Gene3D G3DSA:3.40.50.300 116 318 3.9E-116 T 11-10-2018 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 55 329 1.8E-117 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 SMART SM00962 129 330 7.1E-121 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 Pfam PF00448 SRP54-type protein, GTPase domain 130 329 4.3E-81 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 SMART SM00382 128 306 5.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_07625 5a0b83caba0cfa849523c706f935d212 338 SUPERFAMILY SSF47364 27 105 1.01E-21 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 UP17_07625 5a0b83caba0cfa849523c706f935d212 338 SUPERFAMILY SSF52540 130 328 1.05E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF13193 AMP-binding enzyme C-terminal domain 878 949 1.4E-9 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF13193 AMP-binding enzyme C-terminal domain 1926 1997 3.8E-11 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:1.10.1200.10 2011 2094 2.3E-27 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:1.10.1200.10 965 1050 6.2E-26 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF56801 430 988 2.49E-170 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1670 1681 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF52777 191 454 1.45E-54 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.30.559.10 10 378 4.4E-132 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2047 2062 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.30.559.30 192 443 4.4E-132 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SMART SM00823 Phosphopantetheine attachment site 2023 2092 6.9E-4 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SMART SM00823 Phosphopantetheine attachment site 975 1044 1.2E-7 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF00550 Phosphopantetheine attachment site 2025 2088 5.3E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF00550 Phosphopantetheine attachment site 977 1039 7.6E-15 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF00501 AMP-binding enzyme 1527 1918 1.5E-100 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF00501 AMP-binding enzyme 467 870 1.2E-111 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 ProSitePatterns PS00455 Putative AMP-binding domain signature. 609 620 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.40.50.12780 1513 1912 2.4E-135 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.30.559.10 1065 1436 2.1E-155 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF56801 1484 2035 3.79E-160 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF52777 1248 1513 1.33E-64 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF52777 10 190 3.67E-43 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF47336 2015 2088 6.41E-21 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF52777 1066 1242 1.89E-48 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.40.50.12780 460 863 5.7E-146 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 SUPERFAMILY SSF47336 969 1076 1.2E-22 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 488 894 4.9E-145 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1548 1942 1.5E-134 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.30.300.30 864 963 1.6E-34 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.30.300.30 1913 2010 2.7E-36 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Gene3D G3DSA:3.30.559.30 1246 1489 2.1E-155 T 11-10-2018 UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF00668 Condensation domain 1061 1507 1.6E-116 T 11-10-2018 IPR001242 Condensation domain UP17_11015 3391fd9d93b186add9b9dd6fbb55ee49 2155 Pfam PF00668 Condensation domain 6 447 2.8E-96 T 11-10-2018 IPR001242 Condensation domain UP17_23690 d4533e0b92bf69fdab288dc17782d80e 112 PIRSF PIRSF000025 1 112 4.2E-32 T 11-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 UP17_23690 d4533e0b92bf69fdab288dc17782d80e 112 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 43 107 4.8E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_23690 d4533e0b92bf69fdab288dc17782d80e 112 Gene3D G3DSA:1.10.760.10 43 112 2.4E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 UP17_23690 d4533e0b92bf69fdab288dc17782d80e 112 SUPERFAMILY SSF46626 5 111 6.45E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 UP17_16640 3b1d1cb77795b402653b496601783545 602 Pfam PF13155 Toprim-like 266 351 1.4E-19 T 11-10-2018 UP17_16640 3b1d1cb77795b402653b496601783545 602 SUPERFAMILY SSF56731 118 426 1.57E-104 T 11-10-2018 UP17_16640 3b1d1cb77795b402653b496601783545 602 Gene3D G3DSA:3.40.1360.10 245 366 2.7E-39 T 11-10-2018 UP17_16640 3b1d1cb77795b402653b496601783545 602 SUPERFAMILY SSF48024 462 560 1.83E-8 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 UP17_16640 3b1d1cb77795b402653b496601783545 602 Pfam PF01807 CHC2 zinc finger 7 100 2.6E-37 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 UP17_16640 3b1d1cb77795b402653b496601783545 602 Gene3D G3DSA:3.90.580.10 2 103 8.8E-40 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 UP17_16640 3b1d1cb77795b402653b496601783545 602 PIRSF PIRSF002811 3 602 4.0E-187 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 UP17_16640 3b1d1cb77795b402653b496601783545 602 Gene3D G3DSA:3.90.980.10 113 244 8.2E-51 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily UP17_16640 3b1d1cb77795b402653b496601783545 602 SMART SM00493 263 334 2.5E-16 T 11-10-2018 IPR006171 TOPRIM domain UP17_16640 3b1d1cb77795b402653b496601783545 602 SUPERFAMILY SSF57783 5 100 1.28E-35 T 11-10-2018 UP17_16640 3b1d1cb77795b402653b496601783545 602 Hamap MF_00974 DNA primase [dnaG]. 5 593 29.434 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 UP17_16640 3b1d1cb77795b402653b496601783545 602 TIGRFAM TIGR01391 dnaG: DNA primase 5 421 4.5E-151 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 UP17_16640 3b1d1cb77795b402653b496601783545 602 Pfam PF10410 DnaB-helicase binding domain of primase 372 425 3.2E-13 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 UP17_16640 3b1d1cb77795b402653b496601783545 602 Gene3D G3DSA:1.10.860.10 466 563 3.8E-32 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal UP17_16640 3b1d1cb77795b402653b496601783545 602 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 256 4.0E-45 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal UP17_16640 3b1d1cb77795b402653b496601783545 602 SMART SM00400 37 91 1.5E-31 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 UP17_25500 5bf0d46b54b3eff503d04631f0460699 253 SMART SM00382 97 229 6.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_25500 5bf0d46b54b3eff503d04631f0460699 253 Pfam PF01695 IstB-like ATP binding protein 55 227 2.9E-58 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 UP17_25500 5bf0d46b54b3eff503d04631f0460699 253 SUPERFAMILY SSF52540 66 236 5.47E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_25500 5bf0d46b54b3eff503d04631f0460699 253 Gene3D G3DSA:3.40.50.300 60 245 1.1E-49 T 11-10-2018 UP17_25500 5bf0d46b54b3eff503d04631f0460699 253 PIRSF PIRSF003073 1 249 1.9E-78 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.1E-36 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 3.1E-36 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 3.1E-36 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.1E-36 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.1E-36 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 SUPERFAMILY SSF51905 3 368 1.12E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11900 f72b8077511746cacac189abe2fbf17e 465 Gene3D G3DSA:3.30.390.30 345 465 1.3E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PIRSF PIRSF000350 1 465 3.0E-90 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 Gene3D G3DSA:3.50.50.60 156 278 1.1E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 1.4E-69 T 11-10-2018 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 2.8E-37 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 326 2.6E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 Gene3D G3DSA:3.50.50.60 5 333 1.1E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11900 f72b8077511746cacac189abe2fbf17e 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 464 4.7E-175 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 UP17_11900 f72b8077511746cacac189abe2fbf17e 465 SUPERFAMILY SSF55424 342 464 2.23E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_04490 5f2521aa43ed7f4b2f12f98982a1e390 286 Pfam PF00483 Nucleotidyl transferase 4 263 2.7E-33 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 UP17_04490 5f2521aa43ed7f4b2f12f98982a1e390 286 SUPERFAMILY SSF53448 1 266 9.69E-70 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_04490 5f2521aa43ed7f4b2f12f98982a1e390 286 Gene3D G3DSA:3.90.550.10 1 284 3.3E-89 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_04490 5f2521aa43ed7f4b2f12f98982a1e390 286 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 262 9.9E-115 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 Gene3D G3DSA:3.40.430.10 142 366 4.2E-78 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 362 5.0E-68 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 359 8.8E-121 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 PIRSF PIRSF006769 1 365 1.4E-137 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 Pfam PF01872 RibD C-terminal domain 148 357 2.3E-56 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 1.2E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 SUPERFAMILY SSF53597 146 362 5.76E-67 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 SUPERFAMILY SSF53927 4 143 8.23E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 UP17_22935 13f2304c066c2f8c8c51a9e98b8864fb 366 Gene3D G3DSA:3.40.140.10 1 141 3.1E-47 T 11-10-2018 UP17_05720 caf9e0fa955792bbe4c0526061e03cdb 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 5.4E-20 T 11-10-2018 IPR019618 Spore germination protein GerPA/GerPF UP17_15345 184f2301e775e4fa147dcd3a9d985d0b 153 Pfam PF10673 Protein of unknown function (DUF2487) 9 148 4.3E-51 T 11-10-2018 IPR019615 Protein of unknown function DUF2487 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 223 352 2.2E-41 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 SUPERFAMILY SSF55166 208 359 1.28E-36 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 SMART SM00326 43 104 0.4 T 11-10-2018 IPR001452 SH3 domain GO:0005515 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 SMART SM00326 106 173 0.43 T 11-10-2018 IPR001452 SH3 domain GO:0005515 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 Gene3D G3DSA:3.30.1380.10 167 374 1.7E-77 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 SUPERFAMILY SSF50044 66 112 1.5E-8 T 11-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 SUPERFAMILY SSF50044 135 179 3.67E-8 T 11-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 SMART SM00287 109 172 1.9E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 SMART SM00287 40 103 2.1E-14 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 Pfam PF08239 Bacterial SH3 domain 119 170 8.9E-15 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 Pfam PF08239 Bacterial SH3 domain 50 101 4.9E-15 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 Gene3D G3DSA:2.30.30.40 41 101 4.0E-20 T 11-10-2018 UP17_19825 b3733c67078431f72b4da80f46a51a7a 376 Gene3D G3DSA:2.30.30.40 110 166 2.7E-19 T 11-10-2018 UP17_13940 8c7594ede8edaf9dfba6718c6ba281a5 214 Pfam PF03006 Haemolysin-III related 8 204 1.6E-41 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 UP17_13940 8c7594ede8edaf9dfba6718c6ba281a5 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 211 1.1E-64 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 UP17_06925 4af6f8fd31f42cf3dd7c66fb56f78b46 219 Gene3D G3DSA:3.30.70.1450 138 217 2.6E-26 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_06925 4af6f8fd31f42cf3dd7c66fb56f78b46 219 SUPERFAMILY SSF51735 4 134 1.34E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06925 4af6f8fd31f42cf3dd7c66fb56f78b46 219 SUPERFAMILY SSF116726 131 215 3.14E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_06925 4af6f8fd31f42cf3dd7c66fb56f78b46 219 Pfam PF02254 TrkA-N domain 5 120 1.4E-29 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 UP17_06925 4af6f8fd31f42cf3dd7c66fb56f78b46 219 Gene3D G3DSA:3.40.50.720 1 137 5.0E-38 T 11-10-2018 UP17_06925 4af6f8fd31f42cf3dd7c66fb56f78b46 219 Pfam PF02080 TrkA-C domain 150 216 2.0E-13 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UP17_00875 3537d4a1a5ae5cfc69b135244e693a5d 352 Hamap MF_02040 Iron-sulfur cluster carrier protein. 100 348 33.231 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein UP17_00875 3537d4a1a5ae5cfc69b135244e693a5d 352 SUPERFAMILY SSF117916 2 79 1.73E-6 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily UP17_00875 3537d4a1a5ae5cfc69b135244e693a5d 352 Pfam PF01883 Iron-sulfur cluster assembly protein 4 62 5.1E-6 T 11-10-2018 IPR002744 MIP18 family-like UP17_00875 3537d4a1a5ae5cfc69b135244e693a5d 352 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 110 347 1.1E-83 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 UP17_00875 3537d4a1a5ae5cfc69b135244e693a5d 352 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 UP17_00875 3537d4a1a5ae5cfc69b135244e693a5d 352 Gene3D G3DSA:3.40.50.300 104 324 8.2E-65 T 11-10-2018 UP17_00875 3537d4a1a5ae5cfc69b135244e693a5d 352 SUPERFAMILY SSF52540 105 316 9.46E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 SUPERFAMILY SSF52540 1 235 5.85E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 Gene3D G3DSA:3.40.50.300 2 244 4.3E-55 T 11-10-2018 UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 236 4.4E-20 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 257 445 4.3E-54 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 502 177.612 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 SUPERFAMILY SSF52317 258 455 4.13E-39 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 495 3.6E-173 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UP17_10465 10ba498314a5c46a86eb61b47d09aaad 506 Gene3D G3DSA:3.40.50.880 256 388 6.2E-22 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_19195 885cc294919c5d1f79a2d4db9791722a 302 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 53 131 1.3E-6 T 11-10-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 UP17_19195 885cc294919c5d1f79a2d4db9791722a 302 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 233 257 - T 11-10-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 UP17_19195 885cc294919c5d1f79a2d4db9791722a 302 Gene3D G3DSA:1.10.340.30 128 248 6.8E-32 T 11-10-2018 UP17_19195 885cc294919c5d1f79a2d4db9791722a 302 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 135 286 3.2E-13 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_19195 885cc294919c5d1f79a2d4db9791722a 302 SMART SM00478 137 302 5.3E-27 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_19195 885cc294919c5d1f79a2d4db9791722a 302 SUPERFAMILY SSF48150 117 301 3.49E-42 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 UP17_19195 885cc294919c5d1f79a2d4db9791722a 302 Gene3D G3DSA:1.10.1670.10 251 301 7.3E-6 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 UP17_12015 d559ef2b446b86b477a3a66219af1928 165 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 48 56 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 UP17_12015 d559ef2b446b86b477a3a66219af1928 165 Gene3D G3DSA:3.10.20.30 1 83 1.2E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_12015 d559ef2b446b86b477a3a66219af1928 165 SUPERFAMILY SSF47741 82 159 8.64E-30 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily UP17_12015 d559ef2b446b86b477a3a66219af1928 165 Gene3D G3DSA:1.10.150.120 84 165 1.7E-26 T 11-10-2018 UP17_12015 d559ef2b446b86b477a3a66219af1928 165 SUPERFAMILY SSF54292 10 87 1.02E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 UP17_12015 d559ef2b446b86b477a3a66219af1928 165 Pfam PF01799 [2Fe-2S] binding domain 82 150 3.3E-26 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 SMART SM00357 3 66 1.5E-32 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.2E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 PRINTS PR00050 Cold shock protein signature 4 19 2.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 PRINTS PR00050 Cold shock protein signature 24 33 2.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 PRINTS PR00050 Cold shock protein signature 39 57 2.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 PIRSF PIRSF002599 1 66 8.3E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 SUPERFAMILY SSF50249 1 64 5.14E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_06405 f13e7291bb3bb08d215b27e866d1e4ac 66 Gene3D G3DSA:2.40.50.140 1 66 5.9E-30 T 11-10-2018 UP17_07015 477e9a093957918ebb15586501c578c6 340 SUPERFAMILY SSF52418 71 331 7.85E-87 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_07015 477e9a093957918ebb15586501c578c6 340 Pfam PF00591 Glycosyl transferase family, a/b domain 73 323 1.9E-87 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_07015 477e9a093957918ebb15586501c578c6 340 Gene3D G3DSA:1.20.970.10 5 182 3.0E-118 T 11-10-2018 UP17_07015 477e9a093957918ebb15586501c578c6 340 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 63 1.4E-15 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_07015 477e9a093957918ebb15586501c578c6 340 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 331 6.4E-116 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 UP17_07015 477e9a093957918ebb15586501c578c6 340 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 36.486 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 UP17_07015 477e9a093957918ebb15586501c578c6 340 Gene3D G3DSA:3.40.1030.10 69 315 3.0E-118 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_07015 477e9a093957918ebb15586501c578c6 340 SUPERFAMILY SSF47648 2 66 2.75E-14 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_18340 8059a0ac8f166194d04cd0b2c4637b50 256 PIRSF PIRSF005902 1 256 4.6E-46 T 11-10-2018 IPR001130 TatD family GO:0016788 UP17_18340 8059a0ac8f166194d04cd0b2c4637b50 256 SUPERFAMILY SSF51556 3 255 5.64E-50 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_18340 8059a0ac8f166194d04cd0b2c4637b50 256 Gene3D G3DSA:3.20.20.140 1 256 9.2E-53 T 11-10-2018 UP17_18340 8059a0ac8f166194d04cd0b2c4637b50 256 Pfam PF01026 TatD related DNase 4 255 1.7E-45 T 11-10-2018 IPR001130 TatD family GO:0016788 UP17_18340 8059a0ac8f166194d04cd0b2c4637b50 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 SMART SM00382 358 521 0.0028 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Pfam PF14490 Helix-hairpin-helix containing domain 158 249 3.5E-29 T 11-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Gene3D G3DSA:3.40.50.300 337 753 6.2E-143 T 11-10-2018 UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Gene3D G3DSA:1.10.10.2220 200 297 3.7E-14 T 11-10-2018 UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Gene3D G3DSA:3.40.50.300 518 746 6.2E-143 T 11-10-2018 UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 14 760 29.366 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Pfam PF13538 UvrD-like helicase C-terminal domain 683 731 2.4E-17 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Pfam PF13604 AAA domain 345 555 5.6E-52 T 11-10-2018 UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 24 756 6.6E-257 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 SUPERFAMILY SSF52540 339 738 1.22E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17045 6dd2b545a6805bdd55958352edcbd50a 802 Gene3D G3DSA:2.30.30.940 604 684 6.2E-143 T 11-10-2018 UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 SUPERFAMILY SSF46689 4 81 3.49E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.0E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 SUPERFAMILY SSF48498 78 191 8.01E-26 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 Gene3D G3DSA:1.10.357.10 50 191 1.5E-34 T 11-10-2018 UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 Gene3D G3DSA:1.10.10.60 1 49 1.3E-21 T 11-10-2018 UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 Pfam PF08359 YsiA-like protein, C-terminal region 58 190 1.9E-59 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_17905 820f6a0cd88d429b262bbe6743af8a34 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_13060 2e3c9c9104eb147feb333404b804f819 228 Gene3D G3DSA:3.30.450.40 5 155 2.3E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_13060 2e3c9c9104eb147feb333404b804f819 228 Gene3D G3DSA:1.10.10.10 166 227 5.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13060 2e3c9c9104eb147feb333404b804f819 228 SUPERFAMILY SSF46894 154 227 2.89E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_13060 2e3c9c9104eb147feb333404b804f819 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 221 6.8E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_13060 2e3c9c9104eb147feb333404b804f819 228 SMART SM00421 164 221 3.4E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_13060 2e3c9c9104eb147feb333404b804f819 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 209 1.6E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_13060 2e3c9c9104eb147feb333404b804f819 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 181 1.6E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_13060 2e3c9c9104eb147feb333404b804f819 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 197 1.6E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_13060 2e3c9c9104eb147feb333404b804f819 228 SUPERFAMILY SSF55781 4 153 2.8E-9 T 11-10-2018 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 402 417 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 SMART SM00382 335 479 6.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 Gene3D G3DSA:3.40.50.300 309 486 1.3E-60 T 11-10-2018 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 Gene3D G3DSA:1.10.8.60 487 559 9.7E-15 T 11-10-2018 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 Gene3D G3DSA:1.10.10.60 568 628 1.3E-10 T 11-10-2018 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 Pfam PF01590 GAF domain 108 201 7.3E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 Gene3D G3DSA:3.30.450.40 18 203 9.5E-60 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 SUPERFAMILY SSF46689 584 628 1.61E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 592 609 1.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 609 628 1.1E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 Pfam PF00158 Sigma-54 interaction domain 318 483 8.7E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 Pfam PF02954 Bacterial regulatory protein, Fis family 586 626 1.9E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 SUPERFAMILY SSF55781 107 182 3.38E-5 T 11-10-2018 UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 SUPERFAMILY SSF52540 317 544 3.37E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_11950 50acc3884037e440db46e3911d4fc4cc 628 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 524 533 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_16095 8b978253d0bf35f5d1f645659bb82474 130 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 125 8.0E-44 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 UP17_16095 8b978253d0bf35f5d1f645659bb82474 130 Pfam PF01029 NusB family 5 124 3.9E-37 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 UP17_16095 8b978253d0bf35f5d1f645659bb82474 130 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 129 24.261 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 UP17_16095 8b978253d0bf35f5d1f645659bb82474 130 Gene3D G3DSA:1.10.940.10 1 129 3.3E-44 T 11-10-2018 IPR035926 NusB-like superfamily UP17_16095 8b978253d0bf35f5d1f645659bb82474 130 SUPERFAMILY SSF48013 2 124 8.5E-39 T 11-10-2018 IPR035926 NusB-like superfamily UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 Gene3D G3DSA:3.90.230.10 1 246 1.2E-82 T 11-10-2018 UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 Hamap MF_01974 Methionine aminopeptidase [map]. 1 246 32.792 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 SUPERFAMILY SSF55920 3 245 4.32E-66 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 Pfam PF00557 Metallopeptidase family M24 12 238 9.5E-43 T 11-10-2018 IPR000994 Peptidase M24 UP17_19780 ce407aab7d4a895d06f39f6e8f0c7a3f 246 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 245 5.4E-83 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_10545 2a465445fc646529d286d7addaf5a516 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 2.1E-35 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 UP17_10545 2a465445fc646529d286d7addaf5a516 470 Gene3D G3DSA:3.30.390.30 348 468 5.1E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_10545 2a465445fc646529d286d7addaf5a516 470 Gene3D G3DSA:3.50.50.60 152 273 7.2E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_10545 2a465445fc646529d286d7addaf5a516 470 Gene3D G3DSA:3.50.50.60 13 335 7.2E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_10545 2a465445fc646529d286d7addaf5a516 470 SUPERFAMILY SSF55424 346 468 1.65E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.2E-43 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.2E-43 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.2E-43 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.2E-43 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.2E-43 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 3.2E-173 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PIRSF PIRSF000350 4 459 4.6E-96 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 UP17_10545 2a465445fc646529d286d7addaf5a516 470 SUPERFAMILY SSF51905 7 340 5.18E-66 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_10545 2a465445fc646529d286d7addaf5a516 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 2.6E-73 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 1.6E-75 T 11-10-2018 UP17_10545 2a465445fc646529d286d7addaf5a516 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.6E-75 T 11-10-2018 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 SMART SM01130 3 287 2.0E-129 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 62.748 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 2.7E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 2.7E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.7E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.7E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 288 9.2E-107 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 Gene3D G3DSA:3.20.20.70 1 289 2.4E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 1.3E-107 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 PIRSF PIRSF001365 1 289 2.9E-96 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_08070 e08d00b7e91537409f20af8fa8bad272 289 SUPERFAMILY SSF51569 1 288 2.3E-100 T 11-10-2018 UP17_25000 39db1a24671e3c5a8866cec77413124a 285 SUPERFAMILY SSF109709 105 216 3.14E-35 T 11-10-2018 UP17_25000 39db1a24671e3c5a8866cec77413124a 285 SUPERFAMILY SSF110849 24 115 7.85E-29 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily UP17_25000 39db1a24671e3c5a8866cec77413124a 285 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 23 192 1.7E-63 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 UP17_25000 39db1a24671e3c5a8866cec77413124a 285 Pfam PF02195 ParB-like nuclease domain 25 112 1.0E-27 T 11-10-2018 IPR003115 ParB/Sulfiredoxin UP17_25000 39db1a24671e3c5a8866cec77413124a 285 Gene3D G3DSA:3.90.1530.30 37 99 1.8E-26 T 11-10-2018 UP17_25000 39db1a24671e3c5a8866cec77413124a 285 Gene3D G3DSA:1.10.10.2830 100 214 9.7E-39 T 11-10-2018 UP17_25000 39db1a24671e3c5a8866cec77413124a 285 SMART SM00470 24 113 6.1E-35 T 11-10-2018 IPR003115 ParB/Sulfiredoxin UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 SUPERFAMILY SSF46689 414 463 1.48E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 SUPERFAMILY SSF55785 13 116 1.06E-10 T 11-10-2018 IPR035965 PAS domain superfamily UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 Pfam PF02954 Bacterial regulatory protein, Fis family 423 463 8.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 SMART SM00382 170 314 1.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 66 5.9E-8 T 11-10-2018 IPR000014 PAS domain UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 Pfam PF00158 Sigma-54 interaction domain 150 318 3.4E-66 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 Gene3D G3DSA:1.10.8.60 322 399 1.7E-24 T 11-10-2018 UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 Gene3D G3DSA:3.30.450.20 4 132 7.1E-12 T 11-10-2018 UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 Gene3D G3DSA:1.10.10.60 422 464 3.2E-5 T 11-10-2018 UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 SUPERFAMILY SSF52540 149 393 1.43E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 Gene3D G3DSA:3.40.50.300 136 321 5.7E-67 T 11-10-2018 UP17_04285 f6613b987ec82103d6f1edd831c9ee73 467 SMART SM00091 8 75 0.0012 T 11-10-2018 IPR000014 PAS domain UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 Gene3D G3DSA:1.10.10.10 4 77 5.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 Gene3D G3DSA:3.40.640.10 151 371 3.0E-107 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 Pfam PF00155 Aminotransferase class I and II 118 468 1.7E-35 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 Gene3D G3DSA:3.90.1150.10 114 474 3.0E-107 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.8E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 2.2E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 2.2E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 SMART SM00345 17 76 2.9E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 SUPERFAMILY SSF46785 6 78 3.34E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20570 c9a9f863d52df7bd0e273e2ae7aa2b52 476 SUPERFAMILY SSF53383 106 475 1.13E-95 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_01240 ac78144373403ae8b62498311684fa23 933 SMART SM00304 207 261 6.9E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_01240 ac78144373403ae8b62498311684fa23 933 Gene3D G3DSA:3.30.450.40 277 432 5.0E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_01240 ac78144373403ae8b62498311684fa23 933 SMART SM00448 813 927 2.4E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01240 ac78144373403ae8b62498311684fa23 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 744 757 2.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01240 ac78144373403ae8b62498311684fa23 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 699 2.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01240 ac78144373403ae8b62498311684fa23 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 738 2.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01240 ac78144373403ae8b62498311684fa23 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 713 2.9E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01240 ac78144373403ae8b62498311684fa23 933 SUPERFAMILY SSF47384 506 589 2.75E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_01240 ac78144373403ae8b62498311684fa23 933 Gene3D G3DSA:1.20.1480.50 169 266 1.1E-5 T 11-10-2018 UP17_01240 ac78144373403ae8b62498311684fa23 933 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 635 757 2.6E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_01240 ac78144373403ae8b62498311684fa23 933 Gene3D G3DSA:1.10.287.130 485 586 3.4E-26 T 11-10-2018 UP17_01240 ac78144373403ae8b62498311684fa23 933 Gene3D G3DSA:3.30.565.10 587 760 2.4E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01240 ac78144373403ae8b62498311684fa23 933 SUPERFAMILY SSF52172 812 931 6.97E-40 T 11-10-2018 IPR011006 CheY-like superfamily UP17_01240 ac78144373403ae8b62498311684fa23 933 Pfam PF00072 Response regulator receiver domain 815 927 9.3E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01240 ac78144373403ae8b62498311684fa23 933 SMART SM00388 520 588 4.6E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_01240 ac78144373403ae8b62498311684fa23 933 SUPERFAMILY SSF55874 577 759 5.63E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01240 ac78144373403ae8b62498311684fa23 933 Gene3D G3DSA:3.40.50.12740 812 933 2.1E-44 T 11-10-2018 UP17_01240 ac78144373403ae8b62498311684fa23 933 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 180 1.4E-12 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain UP17_01240 ac78144373403ae8b62498311684fa23 933 SMART SM00387 635 760 7.4E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_01240 ac78144373403ae8b62498311684fa23 933 SMART SM00065 292 438 3.3E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_01240 ac78144373403ae8b62498311684fa23 933 SUPERFAMILY SSF55781 278 457 3.29E-23 T 11-10-2018 UP17_01240 ac78144373403ae8b62498311684fa23 933 Pfam PF13185 GAF domain 292 428 4.7E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_01240 ac78144373403ae8b62498311684fa23 933 Pfam PF00512 His Kinase A (phospho-acceptor) domain 521 586 1.2E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_21430 d2cb71e6dbbf1c43e10a9314d51526fa 291 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 288 1.6E-141 T 11-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_21430 d2cb71e6dbbf1c43e10a9314d51526fa 291 Pfam PF03313 Serine dehydratase alpha chain 15 274 1.4E-77 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 171 2.9E-61 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 Gene3D G3DSA:2.150.10.10 430 519 7.5E-6 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 519 720 1.8E-70 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 Pfam PF12698 ABC-2 family transporter protein 493 716 2.0E-12 T 11-10-2018 UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 Pfam PF12698 ABC-2 family transporter protein 23 167 7.4E-13 T 11-10-2018 UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 SUPERFAMILY SSF58104 181 429 1.44E-6 T 11-10-2018 UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 224 249 3.3E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 439 465 5.1E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 398 423 6.5E-6 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_14970 f18ee4507b6481066865e510d1a84aeb 735 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 467 493 1.8E-6 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Pfam PF00877 NlpC/P60 family 304 404 2.1E-21 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Pfam PF00877 NlpC/P60 family 130 218 1.1E-11 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 SUPERFAMILY SSF54106 231 273 2.62E-8 T 11-10-2018 UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Gene3D G3DSA:3.90.1720.10 282 412 4.9E-30 T 11-10-2018 UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Gene3D G3DSA:3.90.1720.10 99 224 2.5E-15 T 11-10-2018 UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 SUPERFAMILY SSF54001 293 410 1.31E-29 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Pfam PF01476 LysM domain 231 272 5.9E-7 T 11-10-2018 IPR018392 LysM domain UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Pfam PF01476 LysM domain 50 91 1.7E-9 T 11-10-2018 IPR018392 LysM domain UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 SMART SM00257 49 92 3.7E-9 T 11-10-2018 IPR018392 LysM domain UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 SMART SM00257 230 273 1.5E-6 T 11-10-2018 IPR018392 LysM domain UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Gene3D G3DSA:3.10.350.10 225 278 1.2E-10 T 11-10-2018 IPR036779 LysM domain superfamily UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 Gene3D G3DSA:3.10.350.10 42 98 3.6E-12 T 11-10-2018 IPR036779 LysM domain superfamily UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 SUPERFAMILY SSF54001 99 217 1.9E-13 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_14665 63e8b5e7789e9388fb2a9e3f3aa99c1d 415 SUPERFAMILY SSF54106 48 91 7.32E-9 T 11-10-2018 UP17_06865 82b09d505ed242b4761b111b85afdb35 618 Gene3D G3DSA:3.30.70.1450 219 307 3.7E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_06865 82b09d505ed242b4761b111b85afdb35 618 Pfam PF02080 TrkA-C domain 333 401 9.7E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UP17_06865 82b09d505ed242b4761b111b85afdb35 618 Pfam PF02080 TrkA-C domain 232 307 3.8E-7 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UP17_06865 82b09d505ed242b4761b111b85afdb35 618 SUPERFAMILY SSF116726 322 403 3.27E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_06865 82b09d505ed242b4761b111b85afdb35 618 SUPERFAMILY SSF116726 230 307 1.1E-8 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_06865 82b09d505ed242b4761b111b85afdb35 618 Gene3D G3DSA:3.30.70.1450 332 404 5.0E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_06865 82b09d505ed242b4761b111b85afdb35 618 Pfam PF03600 Citrate transporter 16 565 5.7E-57 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 UP17_07280 d7f1f0d7cb6745e1dda37673c70c6837 118 Hamap MF_00910 Cell division protein FtsL [ftsL]. 36 118 12.726 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 UP17_07280 d7f1f0d7cb6745e1dda37673c70c6837 118 Pfam PF04977 Septum formation initiator 44 108 8.5E-7 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC UP17_07280 d7f1f0d7cb6745e1dda37673c70c6837 118 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 38 118 5.5E-18 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 455 5.8E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 9.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 9.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 9.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 9.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 1.8E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 SUPERFAMILY SSF47384 217 300 2.75E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 SMART SM00388 234 300 3.3E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 Gene3D G3DSA:1.20.1480.50 144 238 1.5E-17 T 11-10-2018 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 SUPERFAMILY SSF55874 289 454 2.1E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 Pfam PF00672 HAMP domain 182 228 1.5E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 SUPERFAMILY SSF158472 183 229 2.62E-9 T 11-10-2018 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 SMART SM00304 181 233 6.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 Gene3D G3DSA:3.30.565.10 301 458 1.3E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 Gene3D G3DSA:1.10.287.130 239 296 6.3E-18 T 11-10-2018 UP17_04785 4ffee46453ca7160d94933a08f8982f1 465 SMART SM00387 345 457 1.5E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05310 0317be2b477f22618ad8d5e919e6f370 704 Gene3D G3DSA:3.40.710.10 312 665 1.7E-227 T 11-10-2018 UP17_05310 0317be2b477f22618ad8d5e919e6f370 704 Pfam PF00905 Penicillin binding protein transpeptidase domain 345 680 8.8E-62 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_05310 0317be2b477f22618ad8d5e919e6f370 704 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 296 1.2E-32 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UP17_05310 0317be2b477f22618ad8d5e919e6f370 704 SUPERFAMILY SSF56601 313 687 9.71E-63 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_05310 0317be2b477f22618ad8d5e919e6f370 704 Gene3D G3DSA:3.90.1310.30 61 569 1.7E-227 T 11-10-2018 UP17_05310 0317be2b477f22618ad8d5e919e6f370 704 Gene3D G3DSA:1.10.10.1230 86 188 1.7E-227 T 11-10-2018 UP17_05310 0317be2b477f22618ad8d5e919e6f370 704 SUPERFAMILY SSF56519 57 312 3.27E-30 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 6 313 7.0E-132 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 Gene3D G3DSA:3.90.226.10 3 312 3.5E-111 T 11-10-2018 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 142 4.0E-54 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 2 310 44.411 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 191 200 3.0E-42 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 163 176 3.0E-42 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 82 93 3.0E-42 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 128 144 3.0E-42 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 107 125 3.0E-42 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 147 160 3.0E-42 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01765 c902c189ede52171ace9f2ded8ef450e 317 SUPERFAMILY SSF52096 11 310 3.46E-91 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_05800 6777a10073ada08afd19eac29be7ec84 347 Gene3D G3DSA:3.40.50.2300 167 296 8.2E-76 T 11-10-2018 UP17_05800 6777a10073ada08afd19eac29be7ec84 347 Pfam PF13377 Periplasmic binding protein-like domain 175 335 4.8E-34 T 11-10-2018 UP17_05800 6777a10073ada08afd19eac29be7ec84 347 SMART SM00354 2 72 4.0E-31 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_05800 6777a10073ada08afd19eac29be7ec84 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 7.6E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_05800 6777a10073ada08afd19eac29be7ec84 347 SUPERFAMILY SSF53822 62 337 3.0E-73 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_05800 6777a10073ada08afd19eac29be7ec84 347 Gene3D G3DSA:1.10.260.40 1 60 8.3E-23 T 11-10-2018 UP17_05800 6777a10073ada08afd19eac29be7ec84 347 Gene3D G3DSA:3.40.50.2300 76 324 8.2E-76 T 11-10-2018 UP17_05800 6777a10073ada08afd19eac29be7ec84 347 SUPERFAMILY SSF47413 3 60 6.43E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_18180 7635f89c98e077c7ca8b8e2f6ba0fc29 530 PIRSF PIRSF001363 1 530 1.2E-260 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 UP17_18180 7635f89c98e077c7ca8b8e2f6ba0fc29 530 Pfam PF01274 Malate synthase 9 529 8.7E-212 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 UP17_18180 7635f89c98e077c7ca8b8e2f6ba0fc29 530 Gene3D G3DSA:1.20.1220.12 408 529 9.8E-51 T 11-10-2018 UP17_18180 7635f89c98e077c7ca8b8e2f6ba0fc29 530 SUPERFAMILY SSF51645 6 529 7.59E-196 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 UP17_18180 7635f89c98e077c7ca8b8e2f6ba0fc29 530 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 21 529 1.2E-246 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 UP17_18180 7635f89c98e077c7ca8b8e2f6ba0fc29 530 Gene3D G3DSA:3.20.20.360 3 407 4.3E-195 T 11-10-2018 UP17_18180 7635f89c98e077c7ca8b8e2f6ba0fc29 530 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 11-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 TIGRFAM TIGR02063 RNase_R: ribonuclease R 10 711 8.6E-288 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Gene3D G3DSA:2.40.50.140 140 206 1.5E-9 T 11-10-2018 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Gene3D G3DSA:2.40.50.140 61 138 2.0E-18 T 11-10-2018 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Hamap MF_01895 Ribonuclease R [rnr]. 27 711 61.37 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SUPERFAMILY SSF50249 129 228 3.27E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SUPERFAMILY SSF50249 211 628 5.14E-150 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SMART SM00357 141 205 2.4E-8 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SMART SM00357 75 136 3.0E-11 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Pfam PF08206 Ribonuclease B OB domain 76 135 1.1E-21 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Pfam PF08206 Ribonuclease B OB domain 150 204 1.3E-9 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SMART SM00316 629 711 3.6E-19 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Gene3D G3DSA:2.40.50.140 632 739 8.9E-25 T 11-10-2018 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SUPERFAMILY SSF50249 57 138 7.28E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Pfam PF00575 S1 RNA binding domain 628 710 1.8E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SMART SM00955 251 581 4.4E-185 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 Pfam PF00773 RNB domain 251 580 1.6E-115 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 60 711 4.2E-248 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 UP17_23430 85d8da2d17640e9bf47585ebd46d1d38 789 SUPERFAMILY SSF50249 629 713 9.7E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 Gene3D G3DSA:1.20.1560.10 130 412 1.7E-64 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 Gene3D G3DSA:3.40.50.300 424 668 4.6E-85 T 11-10-2018 UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 Pfam PF00664 ABC transporter transmembrane region 147 379 3.0E-43 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 Pfam PF00005 ABC transporter 444 593 1.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 SUPERFAMILY SSF90123 5 411 1.7E-67 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 ProSitePatterns PS00211 ABC transporters family signature. 565 579 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 SUPERFAMILY SSF52540 422 663 3.52E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05330 b9170832ab0b262bd406f0cc012c75b8 672 SMART SM00382 453 639 2.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_15775 88cbf190d78e712a5416a63087526c31 297 Gene3D G3DSA:1.10.150.130 2 98 6.7E-21 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_15775 88cbf190d78e712a5416a63087526c31 297 SUPERFAMILY SSF56349 106 295 1.53E-58 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_15775 88cbf190d78e712a5416a63087526c31 297 Gene3D G3DSA:1.10.443.10 110 291 1.1E-65 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_15775 88cbf190d78e712a5416a63087526c31 297 Pfam PF00589 Phage integrase family 110 282 5.5E-54 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_15775 88cbf190d78e712a5416a63087526c31 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 297 57.162 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD UP17_15775 88cbf190d78e712a5416a63087526c31 297 SUPERFAMILY SSF47823 4 99 2.35E-19 T 11-10-2018 UP17_15775 88cbf190d78e712a5416a63087526c31 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 1.6E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 UP17_15775 88cbf190d78e712a5416a63087526c31 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 297 60.582 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 UP17_15775 88cbf190d78e712a5416a63087526c31 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 297 5.0E-120 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 UP17_07890 4b255da8653260decb1283f09c48324e 680 SUPERFAMILY SSF47226 2 114 2.09E-31 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 UP17_07890 4b255da8653260decb1283f09c48324e 680 SMART SM01231 300 360 1.4E-17 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 UP17_07890 4b255da8653260decb1283f09c48324e 680 Gene3D G3DSA:3.30.70.1110 169 253 1.6E-30 T 11-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily UP17_07890 4b255da8653260decb1283f09c48324e 680 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 300 359 1.2E-12 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 UP17_07890 4b255da8653260decb1283f09c48324e 680 SUPERFAMILY SSF55874 362 546 3.41E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_07890 4b255da8653260decb1283f09c48324e 680 Pfam PF01584 CheW-like domain 553 679 1.4E-23 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 UP17_07890 4b255da8653260decb1283f09c48324e 680 Gene3D G3DSA:2.30.30.40 548 674 7.7E-38 T 11-10-2018 UP17_07890 4b255da8653260decb1283f09c48324e 680 Gene3D G3DSA:2.40.50.180 571 634 7.7E-38 T 11-10-2018 UP17_07890 4b255da8653260decb1283f09c48324e 680 Pfam PF07194 P2 response regulator binding domain 173 251 7.7E-25 T 11-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 UP17_07890 4b255da8653260decb1283f09c48324e 680 SMART SM00260 540 679 3.1E-36 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 UP17_07890 4b255da8653260decb1283f09c48324e 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 526 2.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_07890 4b255da8653260decb1283f09c48324e 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 532 545 2.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_07890 4b255da8653260decb1283f09c48324e 680 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 464 2.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_07890 4b255da8653260decb1283f09c48324e 680 SUPERFAMILY SSF55052 169 252 1.67E-23 T 11-10-2018 IPR035891 CheY-binding domain of CheA UP17_07890 4b255da8653260decb1283f09c48324e 680 SMART SM00073 3 100 5.4E-35 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 UP17_07890 4b255da8653260decb1283f09c48324e 680 Gene3D G3DSA:1.20.120.160 2 132 1.1E-38 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 UP17_07890 4b255da8653260decb1283f09c48324e 680 Pfam PF01627 Hpt domain 5 96 6.3E-19 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 UP17_07890 4b255da8653260decb1283f09c48324e 680 SMART SM00387 405 548 1.8E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_07890 4b255da8653260decb1283f09c48324e 680 SUPERFAMILY SSF47384 301 361 3.22E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_07890 4b255da8653260decb1283f09c48324e 680 Gene3D G3DSA:3.30.565.10 361 547 6.0E-59 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_07890 4b255da8653260decb1283f09c48324e 680 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 408 547 1.3E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_07890 4b255da8653260decb1283f09c48324e 680 SUPERFAMILY SSF50341 547 679 2.35E-31 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 UP17_07890 4b255da8653260decb1283f09c48324e 680 Gene3D G3DSA:1.10.287.560 300 360 2.7E-20 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 UP17_12255 f960763690fa029054b47a1898acc2a1 323 SUPERFAMILY SSF51658 80 260 5.3E-9 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily UP17_12255 f960763690fa029054b47a1898acc2a1 323 Pfam PF03851 UV-endonuclease UvdE 6 278 8.9E-84 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 UP17_12255 f960763690fa029054b47a1898acc2a1 323 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 4 307 5.7E-66 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 UP17_12255 f960763690fa029054b47a1898acc2a1 323 Gene3D G3DSA:3.20.20.150 3 313 2.3E-91 T 11-10-2018 UP17_02165 2c86294269c7d1d3962f059ccead168f 332 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 244 254 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_02165 2c86294269c7d1d3962f059ccead168f 332 SUPERFAMILY SSF52743 23 302 1.83E-84 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_02165 2c86294269c7d1d3962f059ccead168f 332 PRINTS PR00723 Subtilisin serine protease family (S8) signature 42 61 1.1E-23 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_02165 2c86294269c7d1d3962f059ccead168f 332 PRINTS PR00723 Subtilisin serine protease family (S8) signature 243 259 1.1E-23 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_02165 2c86294269c7d1d3962f059ccead168f 332 PRINTS PR00723 Subtilisin serine protease family (S8) signature 79 92 1.1E-23 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_02165 2c86294269c7d1d3962f059ccead168f 332 Gene3D G3DSA:3.40.50.200 4 308 1.3E-109 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_02165 2c86294269c7d1d3962f059ccead168f 332 Pfam PF00082 Subtilase family 42 297 2.6E-52 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_02165 2c86294269c7d1d3962f059ccead168f 332 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 83 93 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site UP17_02165 2c86294269c7d1d3962f059ccead168f 332 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 47 58 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 Gene3D G3DSA:1.20.1270.10 477 577 2.1E-24 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 Gene3D G3DSA:3.30.420.40 5 347 9.2E-151 T 11-10-2018 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 SUPERFAMILY SSF100920 354 510 9.55E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 SUPERFAMILY SSF53067 160 352 6.29E-66 T 11-10-2018 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 Gene3D G3DSA:3.30.420.40 159 337 9.2E-151 T 11-10-2018 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 53 61 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 172 182 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 358 377 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 439 455 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 304 320 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 335 355 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 PRINTS PR00301 70kDa heat shock protein signature 112 132 6.8E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 Gene3D G3DSA:3.90.640.10 198 279 9.2E-151 T 11-10-2018 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 Pfam PF00012 Hsp70 protein 4 573 3.9E-246 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 SUPERFAMILY SSF100934 477 578 3.27E-13 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 1.9E-283 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 SUPERFAMILY SSF53067 1 157 1.61E-58 T 11-10-2018 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 604 36.885 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 UP17_16770 6f5b17c6cf5aa2e2e40d9b1b4311b8f0 610 Gene3D G3DSA:2.60.34.10 348 476 1.4E-57 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 UP17_24775 64e96624c39a6c574ef0228bd3ec4978 399 SMART SM00359 5 90 0.001 T 11-10-2018 IPR002478 PUA domain GO:0003723 UP17_24775 64e96624c39a6c574ef0228bd3ec4978 399 SUPERFAMILY SSF53335 82 393 3.29E-60 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_24775 64e96624c39a6c574ef0228bd3ec4978 399 Gene3D G3DSA:2.30.130.10 5 73 2.8E-21 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 UP17_24775 64e96624c39a6c574ef0228bd3ec4978 399 Gene3D G3DSA:3.30.750.80 74 180 4.6E-35 T 11-10-2018 UP17_24775 64e96624c39a6c574ef0228bd3ec4978 399 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 105 346 1.4E-28 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 UP17_24775 64e96624c39a6c574ef0228bd3ec4978 399 SUPERFAMILY SSF88697 7 74 9.61E-19 T 11-10-2018 IPR015947 PUA-like superfamily UP17_24775 64e96624c39a6c574ef0228bd3ec4978 399 Gene3D G3DSA:3.40.50.150 182 398 4.0E-54 T 11-10-2018 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 PRINTS PR00067 Catalase signature 289 316 2.3E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 PRINTS PR00067 Catalase signature 21 44 2.3E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 PRINTS PR00067 Catalase signature 321 347 2.3E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 PRINTS PR00067 Catalase signature 105 122 2.3E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 PRINTS PR00067 Catalase signature 124 142 2.3E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 PRINTS PR00067 Catalase signature 84 102 2.3E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 SMART SM01060 8 392 2.8E-297 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 PIRSF PIRSF038928 1 481 1.2E-231 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 SUPERFAMILY SSF56634 3 482 5.23E-219 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 Pfam PF06628 Catalase-related immune-responsive 415 476 8.4E-25 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 Gene3D G3DSA:2.40.180.10 3 484 5.3E-233 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_22620 ffbd9763bc81568208bcf6582495b09a 484 Pfam PF00199 Catalase 8 389 1.6E-198 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 234 249 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 PRINTS PR00069 Aldo-keto reductase signature 201 225 3.7E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 PRINTS PR00069 Aldo-keto reductase signature 40 64 3.7E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 PRINTS PR00069 Aldo-keto reductase signature 100 118 3.7E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 PRINTS PR00069 Aldo-keto reductase signature 164 193 3.7E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 PRINTS PR00069 Aldo-keto reductase signature 130 147 3.7E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 Gene3D G3DSA:3.20.20.100 1 280 4.4E-126 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 SUPERFAMILY SSF51430 7 275 2.49E-94 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 PIRSF PIRSF000097 120 277 2.8E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 PIRSF PIRSF000097 2 125 3.5E-41 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 Pfam PF00248 Aldo/keto reductase family 31 266 2.3E-50 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 130 147 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 UP17_18830 7d2ab6d8cfe713175f84b8f05331f10b 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 UP17_11115 901c2f288f2e3ca4fe48be08546e6705 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 259 1.5E-72 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_11115 901c2f288f2e3ca4fe48be08546e6705 260 Gene3D G3DSA:1.10.12.10 203 260 3.9E-26 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal UP17_11115 901c2f288f2e3ca4fe48be08546e6705 260 Gene3D G3DSA:3.90.226.10 1 202 9.2E-75 T 11-10-2018 UP17_11115 901c2f288f2e3ca4fe48be08546e6705 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 UP17_11115 901c2f288f2e3ca4fe48be08546e6705 260 SUPERFAMILY SSF52096 5 260 3.13E-88 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_16875 9be6328a7275bdb6a25f5ebe7105bd80 374 SUPERFAMILY SSF52540 71 287 9.27E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16875 9be6328a7275bdb6a25f5ebe7105bd80 374 Gene3D G3DSA:3.40.50.300 64 232 4.3E-49 T 11-10-2018 UP17_16875 9be6328a7275bdb6a25f5ebe7105bd80 374 Pfam PF01926 50S ribosome-binding GTPase 170 232 3.3E-14 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_16875 9be6328a7275bdb6a25f5ebe7105bd80 374 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 14 374 8.6E-159 T 11-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH UP17_06340 273545d6296815f0d0882e19dc476e2c 357 SUPERFAMILY SSF53850 47 355 1.76E-88 T 11-10-2018 UP17_06340 273545d6296815f0d0882e19dc476e2c 357 Gene3D G3DSA:3.40.190.10 53 322 5.6E-133 T 11-10-2018 UP17_06340 273545d6296815f0d0882e19dc476e2c 357 Gene3D G3DSA:3.40.190.10 141 352 5.6E-133 T 11-10-2018 UP17_06340 273545d6296815f0d0882e19dc476e2c 357 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 172 180 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 UP17_06340 273545d6296815f0d0882e19dc476e2c 357 Pfam PF13531 Bacterial extracellular solute-binding protein 57 307 5.2E-43 T 11-10-2018 UP17_06340 273545d6296815f0d0882e19dc476e2c 357 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 46 353 8.1E-149 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 UP17_25790 75decc596e3ff6551b88112477ba86a3 155 Gene3D G3DSA:3.30.365.10 1 155 7.0E-56 T 11-10-2018 UP17_25790 75decc596e3ff6551b88112477ba86a3 155 SUPERFAMILY SSF47741 83 150 6.8E-27 T 11-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily UP17_25790 75decc596e3ff6551b88112477ba86a3 155 SUPERFAMILY SSF54292 2 76 2.88E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 UP17_25790 75decc596e3ff6551b88112477ba86a3 155 Pfam PF01799 [2Fe-2S] binding domain 72 144 3.3E-25 T 11-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 UP17_25790 75decc596e3ff6551b88112477ba86a3 155 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 UP17_25790 75decc596e3ff6551b88112477ba86a3 155 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 51 2.7E-8 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Gene3D G3DSA:3.30.470.20 189 324 1.8E-59 T 11-10-2018 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 SMART SM01210 325 418 3.4E-40 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 1.5E-162 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 SUPERFAMILY SSF52440 1 101 1.37E-32 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Gene3D G3DSA:3.30.1490.20 119 188 2.1E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Gene3D G3DSA:3.40.50.20 2 93 4.0E-34 T 11-10-2018 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 8.1E-32 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Gene3D G3DSA:3.90.600.10 325 418 2.0E-30 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.6E-84 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 SMART SM01209 101 293 5.5E-134 T 11-10-2018 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 SUPERFAMILY SSF51246 324 418 4.55E-28 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 42.624 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 416 8.9E-25 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_02005 62be97b00f070cc891f166cbbf4429dd 418 SUPERFAMILY SSF56059 102 320 2.12E-64 T 11-10-2018 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 PRINTS PR01034 Ribosomal protein S12 signature 55 70 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 PRINTS PR01034 Ribosomal protein S12 signature 123 135 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 PRINTS PR01034 Ribosomal protein S12 signature 71 90 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 PRINTS PR01034 Ribosomal protein S12 signature 40 55 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 PRINTS PR01034 Ribosomal protein S12 signature 90 107 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 PRINTS PR01034 Ribosomal protein S12 signature 107 123 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 Gene3D G3DSA:2.40.50.140 1 140 5.3E-63 T 11-10-2018 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 Pfam PF00164 Ribosomal protein S12/S23 32 136 1.9E-38 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 SUPERFAMILY SSF50249 2 136 1.8E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 41.107 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 PIRSF PIRSF002133 1 137 2.1E-49 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00665 f268129147a6f09fc5f246beb913ffe1 140 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 3.0E-69 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_04315 55b09859819432a5ab2907a11d62d005 475 Pfam PF07690 Major Facilitator Superfamily 23 413 1.2E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_04315 55b09859819432a5ab2907a11d62d005 475 SUPERFAMILY SSF103473 15 471 6.67E-59 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_04315 55b09859819432a5ab2907a11d62d005 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 435 1.6E-98 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_04315 55b09859819432a5ab2907a11d62d005 475 Gene3D G3DSA:1.20.1720.10 18 226 1.2E-35 T 11-10-2018 UP17_04315 55b09859819432a5ab2907a11d62d005 475 Gene3D G3DSA:1.20.1250.20 264 475 1.0E-19 T 11-10-2018 UP17_04315 55b09859819432a5ab2907a11d62d005 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 306 330 2.0E-7 T 11-10-2018 UP17_04315 55b09859819432a5ab2907a11d62d005 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 81 103 2.0E-7 T 11-10-2018 UP17_04315 55b09859819432a5ab2907a11d62d005 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 2.0E-7 T 11-10-2018 UP17_04315 55b09859819432a5ab2907a11d62d005 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 2.0E-7 T 11-10-2018 UP17_04280 ac848d7ce52d541b64aa2e190973bc3f 59 SMART SM00914 19 55 2.1E-8 T 11-10-2018 IPR014957 IDEAL domain UP17_04280 ac848d7ce52d541b64aa2e190973bc3f 59 Gene3D G3DSA:4.10.810.10 8 59 2.5E-17 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 UP17_04280 ac848d7ce52d541b64aa2e190973bc3f 59 Pfam PF08858 IDEAL domain 19 55 1.3E-11 T 11-10-2018 IPR014957 IDEAL domain UP17_19025 56bf84c2b97e2920db9285fb3dd18d32 263 Pfam PF05675 Protein of unknown function (DUF817) 6 240 1.5E-106 T 11-10-2018 IPR008535 Protein of unknown function DUF817 UP17_19025 56bf84c2b97e2920db9285fb3dd18d32 263 PIRSF PIRSF009141 1 261 3.1E-130 T 11-10-2018 IPR008535 Protein of unknown function DUF817 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 SUPERFAMILY SSF53901 269 390 1.01E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 7.5E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.2E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 Pfam PF00108 Thiolase, N-terminal domain 5 259 3.8E-76 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 Gene3D G3DSA:3.40.47.10 128 387 1.8E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 PIRSF PIRSF000429 1 392 1.5E-129 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 Gene3D G3DSA:3.40.47.10 6 274 1.8E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 SUPERFAMILY SSF53901 1 263 1.04E-73 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 UP17_23195 081eb89a782b6cfe30c68a807ccec35c 392 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 UP17_00080 12751c54370da732281c9a90bd46050a 425 SUPERFAMILY SSF46589 1 113 1.26E-31 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 UP17_00080 12751c54370da732281c9a90bd46050a 425 SUPERFAMILY SSF55681 117 420 7.61E-106 T 11-10-2018 UP17_00080 12751c54370da732281c9a90bd46050a 425 Gene3D G3DSA:1.10.287.40 1 105 9.5E-25 T 11-10-2018 UP17_00080 12751c54370da732281c9a90bd46050a 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 43.276 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 3.4E-31 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 UP17_00080 12751c54370da732281c9a90bd46050a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 5.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 5.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 5.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 5.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 5.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 Gene3D G3DSA:3.30.930.10 106 425 2.1E-126 T 11-10-2018 UP17_00080 12751c54370da732281c9a90bd46050a 425 PIRSF PIRSF001529 1 425 6.1E-187 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 2.0E-177 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 UP17_00080 12751c54370da732281c9a90bd46050a 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 1.9E-34 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_00425 9a43c77062d2ecf1620b2c75dfc82ce2 278 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 58 71 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_00425 9a43c77062d2ecf1620b2c75dfc82ce2 278 Gene3D G3DSA:3.20.20.20 5 277 1.5E-112 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_00425 9a43c77062d2ecf1620b2c75dfc82ce2 278 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 24 39 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_00425 9a43c77062d2ecf1620b2c75dfc82ce2 278 SUPERFAMILY SSF51717 10 275 1.44E-99 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_00425 9a43c77062d2ecf1620b2c75dfc82ce2 278 Pfam PF00809 Pterin binding enzyme 25 258 1.1E-83 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_00425 9a43c77062d2ecf1620b2c75dfc82ce2 278 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 24 272 6.1E-99 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 UP17_03070 4599d39636783744f0eb06085cda20da 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 3.0E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_03070 4599d39636783744f0eb06085cda20da 188 Gene3D G3DSA:1.10.357.10 1 188 1.2E-39 T 11-10-2018 UP17_03070 4599d39636783744f0eb06085cda20da 188 SUPERFAMILY SSF48498 76 188 1.28E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_03070 4599d39636783744f0eb06085cda20da 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 1.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_03070 4599d39636783744f0eb06085cda20da 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 1.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_03070 4599d39636783744f0eb06085cda20da 188 SUPERFAMILY SSF46689 3 69 6.67E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_03070 4599d39636783744f0eb06085cda20da 188 Pfam PF16925 Bacterial transcriptional repressor C-terminal 77 187 6.1E-10 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal UP17_03005 9939216b114e302ea3a79f60d2869d4a 424 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 67 272 4.8E-48 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_03005 9939216b114e302ea3a79f60d2869d4a 424 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 11 357 8.4E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_03005 9939216b114e302ea3a79f60d2869d4a 424 Pfam PF08388 Group II intron, maturase-specific domain 292 362 5.1E-16 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_03005 9939216b114e302ea3a79f60d2869d4a 424 SUPERFAMILY SSF56672 15 328 1.09E-55 T 11-10-2018 UP17_11645 0bb35f2709c802cda73627b3df837895 63 Pfam PF13070 Protein of unknown function (DUF3934) 1 43 2.0E-13 T 11-10-2018 IPR025175 Protein of unknown function DUF3934 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 1.8E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 1.8E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 1.8E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 1.8E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 1.8E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 1.8E-39 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 SUPERFAMILY SSF56655 5 258 2.36E-73 T 11-10-2018 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 Pfam PF00459 Inositol monophosphatase family 5 255 1.4E-64 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 Gene3D G3DSA:3.40.190.80 145 264 1.5E-32 T 11-10-2018 UP17_07050 0d6f1c0471cfc0af0a660c844b425d67 267 Gene3D G3DSA:3.30.540.10 2 143 9.6E-43 T 11-10-2018 UP17_15765 b70f135dde06eedf2d18f310481c8358 270 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 21 268 1.9E-113 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 UP17_15765 b70f135dde06eedf2d18f310481c8358 270 SUPERFAMILY SSF53167 2 270 5.89E-100 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 UP17_15765 b70f135dde06eedf2d18f310481c8358 270 PIRSF PIRSF000477 1 270 1.7E-119 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 UP17_15765 b70f135dde06eedf2d18f310481c8358 270 Gene3D G3DSA:3.40.50.1580 1 269 1.2E-116 T 11-10-2018 UP17_15765 b70f135dde06eedf2d18f310481c8358 270 Pfam PF01048 Phosphorylase superfamily 22 267 9.9E-55 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UP17_15765 b70f135dde06eedf2d18f310481c8358 270 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 21 267 3.2E-117 T 11-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 UP17_15765 b70f135dde06eedf2d18f310481c8358 270 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 74 115 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 UP17_00015 5023fbf5cb20dd1f06ca20c3273daf35 70 Gene3D G3DSA:3.10.290.10 1 67 1.3E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_00015 5023fbf5cb20dd1f06ca20c3273daf35 70 Pfam PF13275 S4 domain 4 66 1.9E-26 T 11-10-2018 UP17_00015 5023fbf5cb20dd1f06ca20c3273daf35 70 SUPERFAMILY SSF55174 3 66 7.53E-17 T 11-10-2018 UP17_00015 5023fbf5cb20dd1f06ca20c3273daf35 70 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 4 62 5.2E-30 T 11-10-2018 IPR014330 RNA-binding S4-related,YaaA UP17_24425 4013b57ad81474939fb5912fa0deb787 249 SUPERFAMILY SSF54909 1 247 3.49E-94 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_24425 4013b57ad81474939fb5912fa0deb787 249 Gene3D G3DSA:3.30.70.1030 1 138 1.9E-55 T 11-10-2018 UP17_24425 4013b57ad81474939fb5912fa0deb787 249 Pfam PF06778 Chlorite dismutase 33 237 1.3E-76 T 11-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase UP17_24425 4013b57ad81474939fb5912fa0deb787 249 Hamap MF_01442 Putative heme-dependent peroxidase . 1 249 57.207 T 11-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family UP17_24425 4013b57ad81474939fb5912fa0deb787 249 Gene3D G3DSA:3.30.70.1100 139 249 2.0E-46 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SUPERFAMILY SSF50249 186 273 3.36E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SMART SM00316 186 256 1.3E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SMART SM00316 100 167 5.6E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SMART SM00316 14 84 4.6E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SMART SM00316 271 342 3.3E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Gene3D G3DSA:2.40.50.140 183 264 3.9E-29 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Gene3D G3DSA:2.40.50.140 267 352 3.9E-26 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SUPERFAMILY SSF50249 85 172 1.48E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 151 171 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 208 229 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 16 34 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 286 305 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 81 100 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 122 139 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 325 343 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 PRINTS PR00681 Ribosomal protein S1 signature 105 121 3.6E-49 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Pfam PF00575 S1 RNA binding domain 14 83 4.1E-12 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Pfam PF00575 S1 RNA binding domain 98 167 8.6E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Pfam PF00575 S1 RNA binding domain 184 256 3.6E-25 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Pfam PF00575 S1 RNA binding domain 270 342 2.1E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SUPERFAMILY SSF50249 251 351 2.72E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Gene3D G3DSA:2.40.50.140 95 180 5.3E-12 T 11-10-2018 UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 SUPERFAMILY SSF50249 7 105 1.79E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_15495 df0057ffb42dd3d29d04ff8c0cf0d993 379 Gene3D G3DSA:2.40.50.140 3 94 4.5E-17 T 11-10-2018 UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 Gene3D G3DSA:2.40.240.10 1 94 1.1E-25 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 Pfam PF01386 Ribosomal L25p family 5 91 2.9E-22 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 180 25.75 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 Gene3D G3DSA:2.170.120.20 97 188 4.0E-28 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 91 3.0E-20 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 5 179 3.9E-51 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 SUPERFAMILY SSF50715 10 182 9.94E-52 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_00305 e3d7e0f5372bc33d9a1fd3f345fa8ddf 212 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 182 2.1E-27 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain UP17_13485 925a1c0676d0202dd6e4bf212824283e 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 7.0E-130 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_13485 925a1c0676d0202dd6e4bf212824283e 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.6E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_13485 925a1c0676d0202dd6e4bf212824283e 420 SUPERFAMILY SSF56672 5 347 1.09E-57 T 11-10-2018 UP17_13485 925a1c0676d0202dd6e4bf212824283e 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_13485 925a1c0676d0202dd6e4bf212824283e 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_13485 925a1c0676d0202dd6e4bf212824283e 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_13485 925a1c0676d0202dd6e4bf212824283e 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.2E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_14200 f4f1a62a0aa588755edb4761ca3d5e74 234 Pfam PF01048 Phosphorylase superfamily 16 223 1.1E-40 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UP17_14200 f4f1a62a0aa588755edb4761ca3d5e74 234 SUPERFAMILY SSF53167 2 232 8.64E-92 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 UP17_14200 f4f1a62a0aa588755edb4761ca3d5e74 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 47.617 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 UP17_14200 f4f1a62a0aa588755edb4761ca3d5e74 234 Gene3D G3DSA:3.40.50.1580 1 234 2.3E-73 T 11-10-2018 UP17_14200 f4f1a62a0aa588755edb4761ca3d5e74 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 1.6E-108 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 UP17_14200 f4f1a62a0aa588755edb4761ca3d5e74 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_03330 34f3b54ac0987befbeb55f4f7ee969ca 100 Gene3D G3DSA:3.30.280.10 1 100 5.3E-48 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03330 34f3b54ac0987befbeb55f4f7ee969ca 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.835 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03330 34f3b54ac0987befbeb55f4f7ee969ca 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 6.3E-49 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03330 34f3b54ac0987befbeb55f4f7ee969ca 100 Pfam PF00547 Urease, gamma subunit 1 99 1.1E-47 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03330 34f3b54ac0987befbeb55f4f7ee969ca 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-40 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03330 34f3b54ac0987befbeb55f4f7ee969ca 100 PIRSF PIRSF001223 1 100 3.1E-52 T 11-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03330 34f3b54ac0987befbeb55f4f7ee969ca 100 SUPERFAMILY SSF54111 1 100 1.57E-46 T 11-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_12315 b76a1342850081a87c9404df6621eb6a 208 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 3 206 4.5E-19 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 Gene3D G3DSA:3.30.1390.10 49 119 1.2E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 47 8.3E-22 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 119 25.702 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 54 90 4.0E-11 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 119 3.2E-51 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 Gene3D G3DSA:1.20.5.710 1 48 1.3E-23 T 11-10-2018 UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 SUPERFAMILY SSF48300 1 55 2.49E-17 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 53 119 3.3E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00640 cd1877dcbce372cb367ce08b75fdcfa5 119 SUPERFAMILY SSF54736 48 119 1.5E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like UP17_07830 8047d4d14497599ed045791a5c35d29f 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 322 7.0E-113 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UP17_07830 8047d4d14497599ed045791a5c35d29f 332 Gene3D G3DSA:3.40.1550.10 46 232 1.9E-62 T 11-10-2018 IPR028976 CheC-like superfamily UP17_07830 8047d4d14497599ed045791a5c35d29f 332 Gene3D G3DSA:2.30.330.10 240 329 9.5E-9 T 11-10-2018 IPR036429 SpoA-like superfamily UP17_07830 8047d4d14497599ed045791a5c35d29f 332 SUPERFAMILY SSF103039 47 231 1.57E-31 T 11-10-2018 IPR028976 CheC-like superfamily UP17_07830 8047d4d14497599ed045791a5c35d29f 332 SUPERFAMILY SSF101801 253 328 9.68E-17 T 11-10-2018 IPR036429 SpoA-like superfamily UP17_07830 8047d4d14497599ed045791a5c35d29f 332 PIRSF PIRSF002888 2 332 1.9E-116 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UP17_07830 8047d4d14497599ed045791a5c35d29f 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 2.4E-76 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UP17_07830 8047d4d14497599ed045791a5c35d29f 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 324 2.0E-20 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) UP17_07830 8047d4d14497599ed045791a5c35d29f 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.3E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UP17_07830 8047d4d14497599ed045791a5c35d29f 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 2.3E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UP17_07830 8047d4d14497599ed045791a5c35d29f 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 2.3E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UP17_07830 8047d4d14497599ed045791a5c35d29f 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 2.3E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 UP17_22175 a188b059d0691ccf453e649f5194d66a 493 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 6 488 47.268 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 UP17_22175 a188b059d0691ccf453e649f5194d66a 493 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 479 4.9E-20 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_22175 a188b059d0691ccf453e649f5194d66a 493 Gene3D G3DSA:3.40.50.12780 2 392 6.2E-117 T 11-10-2018 UP17_22175 a188b059d0691ccf453e649f5194d66a 493 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_22175 a188b059d0691ccf453e649f5194d66a 493 Pfam PF00501 AMP-binding enzyme 12 395 1.3E-85 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_22175 a188b059d0691ccf453e649f5194d66a 493 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 31 485 2.3E-137 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 UP17_22175 a188b059d0691ccf453e649f5194d66a 493 SUPERFAMILY SSF56801 6 489 1.24E-134 T 11-10-2018 UP17_22175 a188b059d0691ccf453e649f5194d66a 493 Gene3D G3DSA:3.30.300.310 393 492 5.3E-33 T 11-10-2018 UP17_15270 50a498e702ff557f6d316790052f8221 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 86 324 1.8E-68 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_15270 50a498e702ff557f6d316790052f8221 326 Gene3D G3DSA:3.30.930.10 68 277 6.4E-65 T 11-10-2018 UP17_15270 50a498e702ff557f6d316790052f8221 326 Pfam PF02237 Biotin protein ligase C terminal domain 280 324 1.6E-7 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 UP17_15270 50a498e702ff557f6d316790052f8221 326 Pfam PF08279 HTH domain 6 60 4.8E-16 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 UP17_15270 50a498e702ff557f6d316790052f8221 326 SUPERFAMILY SSF46785 2 61 2.64E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_15270 50a498e702ff557f6d316790052f8221 326 Gene3D G3DSA:2.30.30.100 280 326 1.5E-6 T 11-10-2018 UP17_15270 50a498e702ff557f6d316790052f8221 326 SUPERFAMILY SSF50037 283 325 8.24E-5 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal UP17_15270 50a498e702ff557f6d316790052f8221 326 SUPERFAMILY SSF55681 72 277 1.09E-58 T 11-10-2018 UP17_15270 50a498e702ff557f6d316790052f8221 326 Gene3D G3DSA:1.10.10.10 1 65 1.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15270 50a498e702ff557f6d316790052f8221 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 214 1.3E-17 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 UP17_15270 50a498e702ff557f6d316790052f8221 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 326 36.983 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 UP17_21510 ee95788dd40c9a2934dc4bd3fcdb108d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 61 2.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_21510 ee95788dd40c9a2934dc4bd3fcdb108d 199 SUPERFAMILY SSF46689 10 72 7.48E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_21510 ee95788dd40c9a2934dc4bd3fcdb108d 199 Pfam PF14278 Transcriptional regulator C-terminal region 95 170 4.9E-15 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type UP17_21510 ee95788dd40c9a2934dc4bd3fcdb108d 199 Gene3D G3DSA:1.10.357.10 6 188 2.1E-43 T 11-10-2018 UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 Gene3D G3DSA:1.20.120.530 84 223 7.7E-10 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 SUPERFAMILY SSF48008 83 213 3.66E-12 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 Gene3D G3DSA:1.10.10.10 4 78 2.7E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 Pfam PF07729 FCD domain 89 200 6.7E-11 T 11-10-2018 IPR011711 GntR, C-terminal UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 4.7E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 4.7E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 SUPERFAMILY SSF46785 9 81 4.67E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 48 67 4.2E-5 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 48 4.2E-5 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 SMART SM00345 19 77 8.2E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_11995 cabf3b87688e1aa90dc706881918c2aa 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 77 4.4E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_03240 57d53eb05d125151a17ecc919baef498 128 Pfam PF07485 Domain of Unknown Function (DUF1259) 11 127 4.9E-31 T 11-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO UP17_02880 4af08314298b262f49132ceb2ffcfe49 176 Gene3D G3DSA:3.40.50.360 1 176 3.0E-52 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_02880 4af08314298b262f49132ceb2ffcfe49 176 Pfam PF02525 Flavodoxin-like fold 2 170 2.7E-38 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_02880 4af08314298b262f49132ceb2ffcfe49 176 SUPERFAMILY SSF52218 2 176 1.21E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_08200 7b852559ddf91d23add4dad54f1e6f31 288 SUPERFAMILY SSF52518 11 262 3.86E-75 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_08200 7b852559ddf91d23add4dad54f1e6f31 288 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 269 2.4E-97 T 11-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate UP17_08200 7b852559ddf91d23add4dad54f1e6f31 288 Gene3D G3DSA:3.40.50.970 67 224 4.4E-28 T 11-10-2018 UP17_08200 7b852559ddf91d23add4dad54f1e6f31 288 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 264 1.1E-23 T 11-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal UP17_08200 7b852559ddf91d23add4dad54f1e6f31 288 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 195 1.9E-33 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 259 37.829 T 11-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 SUPERFAMILY SSF52343 95 258 2.1E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 Gene3D G3DSA:2.40.30.10 2 98 2.8E-28 T 11-10-2018 UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 PIRSF PIRSF006816 1 259 1.7E-71 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 Gene3D G3DSA:3.40.50.80 102 215 2.8E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 Gene3D G3DSA:2.10.240.10 216 259 3.7E-18 T 11-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 202 1.3E-5 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 216 257 4.5E-17 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UP17_07450 e9eb4e69d43f030afd2ac3a5fa271578 259 SUPERFAMILY SSF63380 2 100 2.15E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel UP17_03770 25a712ceca1f346c3f70a469648ee6af 103 SUPERFAMILY SSF101697 3 103 5.1E-45 T 11-10-2018 IPR036289 Hypothetical protein YfhH UP17_03770 25a712ceca1f346c3f70a469648ee6af 103 Gene3D G3DSA:2.30.30.340 52 103 3.8E-28 T 11-10-2018 UP17_03770 25a712ceca1f346c3f70a469648ee6af 103 Pfam PF08838 Protein of unknown function (DUF1811) 5 103 2.9E-44 T 11-10-2018 IPR014938 Protein of unknown function DUF1811 UP17_03770 25a712ceca1f346c3f70a469648ee6af 103 Gene3D G3DSA:1.10.287.880 1 51 8.8E-25 T 11-10-2018 UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 Pfam PF00664 ABC transporter transmembrane region 26 292 1.5E-42 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 Gene3D G3DSA:3.40.50.300 332 581 2.6E-92 T 11-10-2018 UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 Pfam PF00005 ABC transporter 359 508 6.3E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 Gene3D G3DSA:1.20.1560.10 4 325 5.2E-109 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 SUPERFAMILY SSF90123 5 325 1.05E-79 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 SUPERFAMILY SSF52540 332 579 7.45E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_03820 b9e0a8efc8ec1590bb74d8cd57658738 582 SMART SM00382 368 554 7.7E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Gene3D G3DSA:1.10.510.10 92 278 1.1E-53 T 11-10-2018 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Gene3D G3DSA:3.30.200.20 1 90 3.4E-33 T 11-10-2018 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 SMART SM00740 522 589 1.2E-7 T 11-10-2018 IPR005543 PASTA domain UP17_07535 81e24602121dda60bc527bb9c4a84666 676 SMART SM00740 454 521 2.0E-4 T 11-10-2018 IPR005543 PASTA domain UP17_07535 81e24602121dda60bc527bb9c4a84666 676 SMART SM00740 386 453 1.1E-10 T 11-10-2018 IPR005543 PASTA domain UP17_07535 81e24602121dda60bc527bb9c4a84666 676 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Gene3D G3DSA:3.30.10.20 384 456 2.5E-14 T 11-10-2018 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Gene3D G3DSA:3.30.10.20 527 592 6.5E-14 T 11-10-2018 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Gene3D G3DSA:2.60.40.2560 596 674 2.2E-18 T 11-10-2018 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Pfam PF00069 Protein kinase domain 11 258 3.0E-55 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 SUPERFAMILY SSF56112 7 269 2.7E-82 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Pfam PF03793 PASTA domain 390 450 3.6E-10 T 11-10-2018 IPR005543 PASTA domain UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Pfam PF03793 PASTA domain 462 521 1.2E-10 T 11-10-2018 IPR005543 PASTA domain UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Pfam PF03793 PASTA domain 545 589 4.0E-11 T 11-10-2018 IPR005543 PASTA domain UP17_07535 81e24602121dda60bc527bb9c4a84666 676 Gene3D G3DSA:3.30.10.20 458 523 2.6E-10 T 11-10-2018 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 UP17_07535 81e24602121dda60bc527bb9c4a84666 676 SMART SM00220 11 268 2.3E-66 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 UP17_16570 335cc4670dff9dfaee4f0693be9b49c7 194 SUPERFAMILY SSF56784 3 163 5.8E-16 T 11-10-2018 IPR036412 HAD-like superfamily UP17_16570 335cc4670dff9dfaee4f0693be9b49c7 194 Gene3D G3DSA:3.40.50.1000 52 185 4.0E-7 T 11-10-2018 IPR023214 HAD superfamily UP17_16570 335cc4670dff9dfaee4f0693be9b49c7 194 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 7 179 1.7E-9 T 11-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 UP17_16570 335cc4670dff9dfaee4f0693be9b49c7 194 PIRSF PIRSF021362 2 190 8.7E-66 T 11-10-2018 IPR009206 Nucleotidase, putative UP17_05275 33249afff471d9053153a2b09ed54d13 556 SUPERFAMILY SSF56112 94 310 3.78E-27 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_05275 33249afff471d9053153a2b09ed54d13 556 Pfam PF03109 ABC1 family 112 230 4.5E-34 T 11-10-2018 IPR004147 UbiB domain UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 SUPERFAMILY SSF54680 331 432 7.59E-27 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 1.2E-23 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 6.9E-178 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 Gene3D G3DSA:1.20.970.10 1 67 2.6E-31 T 11-10-2018 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 SMART SM00941 345 418 2.3E-29 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 Gene3D G3DSA:3.40.1030.10 77 330 6.2E-151 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 1.5E-23 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 8.2E-46 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 SUPERFAMILY SSF47648 1 69 1.7E-23 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 Gene3D G3DSA:3.90.1170.30 331 420 6.2E-151 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 SUPERFAMILY SSF52418 69 329 4.97E-92 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_15760 097e97d0bba978577effc4f8c636f1c3 434 PIRSF PIRSF000478 1 433 3.0E-167 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 UP17_05750 aa1764723dac30bd56d68565218e4943 530 Pfam PF00501 AMP-binding enzyme 13 424 3.0E-105 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_05750 aa1764723dac30bd56d68565218e4943 530 Gene3D G3DSA:3.30.300.310 420 524 2.4E-34 T 11-10-2018 UP17_05750 aa1764723dac30bd56d68565218e4943 530 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_05750 aa1764723dac30bd56d68565218e4943 530 Gene3D G3DSA:3.40.50.12780 1 419 8.8E-123 T 11-10-2018 UP17_05750 aa1764723dac30bd56d68565218e4943 530 SUPERFAMILY SSF56801 5 520 2.09E-151 T 11-10-2018 UP17_05750 aa1764723dac30bd56d68565218e4943 530 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 508 1.4E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 PIRSF PIRSF005962 1 377 5.5E-93 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 363 1.8E-82 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 Pfam PF07687 Peptidase dimerisation domain 176 268 9.1E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 Gene3D G3DSA:3.30.70.360 173 285 3.8E-83 T 11-10-2018 UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 SUPERFAMILY SSF53187 3 375 1.48E-59 T 11-10-2018 UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 Gene3D G3DSA:3.40.630.10 13 360 3.8E-83 T 11-10-2018 UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 SUPERFAMILY SSF55031 178 280 5.08E-19 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_09175 73237172dbdc0077d2c288cf8fb0af56 380 Pfam PF01546 Peptidase family M20/M25/M40 73 371 1.3E-25 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 SUPERFAMILY SSF90123 2 315 1.44E-78 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 Pfam PF00664 ABC transporter transmembrane region 15 280 3.0E-47 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 Pfam PF00005 ABC transporter 350 499 1.6E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 Gene3D G3DSA:1.20.1560.10 1 313 4.0E-92 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 SMART SM00382 359 543 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 SUPERFAMILY SSF52540 329 568 2.04E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02455 cd09cd31bded230c10887fd59a309ebd 582 Gene3D G3DSA:3.40.50.300 324 576 4.4E-84 T 11-10-2018 UP17_17680 e373690ee1bc6cb191637d23e6ea3fe5 193 Gene3D G3DSA:3.40.50.300 1 193 3.3E-52 T 11-10-2018 UP17_17680 e373690ee1bc6cb191637d23e6ea3fe5 193 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 189 7.1E-68 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 UP17_17680 e373690ee1bc6cb191637d23e6ea3fe5 193 Pfam PF01926 50S ribosome-binding GTPase 26 143 1.5E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_17680 e373690ee1bc6cb191637d23e6ea3fe5 193 SUPERFAMILY SSF52540 2 192 1.57E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17680 e373690ee1bc6cb191637d23e6ea3fe5 193 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 27.66 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 276 37.784 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 SUPERFAMILY SSF52096 26 274 4.97E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_01770 26971ff551fe76f34abc0647f99fe620 284 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 246 255 3.2E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 124 138 3.2E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 195 212 3.2E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 224 235 3.2E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 158 176 3.2E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 23 275 2.5E-112 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 Gene3D G3DSA:3.90.226.10 25 276 4.0E-80 T 11-10-2018 UP17_01770 26971ff551fe76f34abc0647f99fe620 284 Pfam PF01039 Carboxyl transferase domain 57 237 7.6E-15 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 UP17_23550 6da861be85dc088ad3418282203f9b57 244 SUPERFAMILY SSF51366 5 240 2.62E-70 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_23550 6da861be85dc088ad3418282203f9b57 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 238 4.2E-80 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 UP17_23550 6da861be85dc088ad3418282203f9b57 244 Gene3D G3DSA:3.20.20.70 1 243 8.5E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_23550 6da861be85dc088ad3418282203f9b57 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 241 35.787 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 UP17_23550 6da861be85dc088ad3418282203f9b57 244 Pfam PF00977 Histidine biosynthesis protein 6 234 8.9E-74 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 UP17_25550 3dd044c774b1f160f2697c488651547d 276 SUPERFAMILY SSF161098 70 260 6.54E-28 T 11-10-2018 IPR035906 MetI-like superfamily UP17_25550 3dd044c774b1f160f2697c488651547d 276 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 16 271 5.8E-116 T 11-10-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 UP17_25550 3dd044c774b1f160f2697c488651547d 276 Gene3D G3DSA:1.10.3720.10 66 271 1.7E-26 T 11-10-2018 IPR035906 MetI-like superfamily UP17_25550 3dd044c774b1f160f2697c488651547d 276 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 10 51 1.4E-5 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain UP17_25550 3dd044c774b1f160f2697c488651547d 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 270 2.9E-30 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_03665 84c617f32939cff31ac0cf1d646d17d9 394 Gene3D G3DSA:1.20.1250.20 15 389 4.3E-59 T 11-10-2018 UP17_03665 84c617f32939cff31ac0cf1d646d17d9 394 Pfam PF07690 Major Facilitator Superfamily 24 244 1.8E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_03665 84c617f32939cff31ac0cf1d646d17d9 394 SUPERFAMILY SSF103473 15 391 2.88E-66 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 361 44.769 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 10 334 1.8E-116 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 SMART SM00922 144 236 9.7E-18 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 9 126 4.1E-15 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 Gene3D G3DSA:3.30.390.10 8 352 1.1E-129 T 11-10-2018 IPR029017 Enolase-like, N-terminal UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 Gene3D G3DSA:3.20.20.120 119 348 1.1E-129 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 Pfam PF13378 Enolase C-terminal domain-like 158 353 2.2E-42 T 11-10-2018 IPR029065 Enolase C-terminal domain-like UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 SUPERFAMILY SSF54826 1 127 9.43E-29 T 11-10-2018 UP17_09500 abc9ba2aa54ddc45dfaab48fbd19e20e 371 SUPERFAMILY SSF51604 126 368 3.41E-66 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 6.5E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 Pfam PF00072 Response regulator receiver domain 4 112 7.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 Gene3D G3DSA:3.40.50.2300 2 126 1.2E-29 T 11-10-2018 UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 SUPERFAMILY SSF52172 2 118 3.42E-34 T 11-10-2018 IPR011006 CheY-like superfamily UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 SMART SM00862 152 227 6.8E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 Gene3D G3DSA:1.10.10.10 130 234 2.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 SUPERFAMILY SSF46894 130 227 4.82E-23 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_08330 d711e54dc5ee35af0ae6a817e3b073a6 235 SMART SM00448 2 112 5.7E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_13435 78b036d9ccf3b4507d3a9bec7395340a 464 PIRSF PIRSF006060 1 464 1.5E-77 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_13435 78b036d9ccf3b4507d3a9bec7395340a 464 Gene3D G3DSA:1.20.1740.10 8 462 5.5E-62 T 11-10-2018 UP17_13435 78b036d9ccf3b4507d3a9bec7395340a 464 ProSitePatterns PS00218 Amino acid permeases signature. 42 73 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_13435 78b036d9ccf3b4507d3a9bec7395340a 464 Pfam PF00324 Amino acid permease 17 451 2.0E-115 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 SUPERFAMILY SSF51735 1 251 3.97E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 1.7E-48 T 11-10-2018 UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 6.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 6.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.6E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10175 c717b8db9c44abbe4ea2e5eb7c00e848 257 Gene3D G3DSA:3.40.50.720 2 254 5.1E-65 T 11-10-2018 UP17_24975 4420530a80eba9c20602a585a1e79194 366 Gene3D G3DSA:3.10.20.30 48 364 8.1E-158 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_24975 4420530a80eba9c20602a585a1e79194 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_24975 4420530a80eba9c20602a585a1e79194 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_24975 4420530a80eba9c20602a585a1e79194 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_24975 4420530a80eba9c20602a585a1e79194 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_24975 4420530a80eba9c20602a585a1e79194 366 SUPERFAMILY SSF81271 282 363 1.4E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 UP17_24975 4420530a80eba9c20602a585a1e79194 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 46.233 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 UP17_24975 4420530a80eba9c20602a585a1e79194 366 Gene3D G3DSA:3.40.50.300 4 281 8.1E-158 T 11-10-2018 UP17_24975 4420530a80eba9c20602a585a1e79194 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 2.1E-40 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 UP17_24975 4420530a80eba9c20602a585a1e79194 366 Gene3D G3DSA:1.10.150.300 113 200 8.1E-158 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 UP17_24975 4420530a80eba9c20602a585a1e79194 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 4.5E-162 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 UP17_24975 4420530a80eba9c20602a585a1e79194 366 PIRSF PIRSF006641 1 366 2.2E-168 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 UP17_24975 4420530a80eba9c20602a585a1e79194 366 SUPERFAMILY SSF52540 3 304 4.87E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24975 4420530a80eba9c20602a585a1e79194 366 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.5E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_13235 bf131e4bfbc0eee6869382b8aaa09843 332 Pfam PF03060 Nitronate monooxygenase 91 308 2.3E-25 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 UP17_13235 bf131e4bfbc0eee6869382b8aaa09843 332 Gene3D G3DSA:3.20.20.70 11 328 4.3E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_13235 bf131e4bfbc0eee6869382b8aaa09843 332 SUPERFAMILY SSF51412 12 293 2.38E-52 T 11-10-2018 UP17_22910 f45eade017d8eb2147a6913279166174 112 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 108 3.8E-32 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 UP17_22910 f45eade017d8eb2147a6913279166174 112 Pfam PF03334 Na+/H+ antiporter subunit 12 93 6.0E-28 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 UP17_01975 28a063330909324974b59110647b8b2b 228 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 206 6.0E-45 T 11-10-2018 UP17_01975 28a063330909324974b59110647b8b2b 228 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 219 4.1E-94 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01975 28a063330909324974b59110647b8b2b 228 Gene3D G3DSA:3.40.50.880 1 221 7.3E-75 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_01975 28a063330909324974b59110647b8b2b 228 SUPERFAMILY SSF52317 1 220 8.06E-78 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_01975 28a063330909324974b59110647b8b2b 228 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 45.241 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01975 28a063330909324974b59110647b8b2b 228 SMART SM01211 1 220 6.7E-138 T 11-10-2018 UP17_01975 28a063330909324974b59110647b8b2b 228 PIRSF PIRSF001586 1 223 5.2E-91 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 SUPERFAMILY SSF52777 98 275 1.33E-35 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Pfam PF00550 Phosphopantetheine attachment site 1054 1114 1.6E-11 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_03515 6cdbeacc63327416474268afc1e41529 1572 SUPERFAMILY SSF56801 516 1065 8.5E-137 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 SUPERFAMILY SSF47336 1046 1114 2.73E-14 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Pfam PF13193 AMP-binding enzyme C-terminal domain 960 1028 3.5E-5 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Gene3D G3DSA:3.30.559.10 1122 1300 2.4E-35 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 SUPERFAMILY SSF52777 281 527 1.22E-49 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 579 969 2.5E-115 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Gene3D G3DSA:3.30.300.30 942 1043 1.2E-26 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 SUPERFAMILY SSF52777 1321 1514 7.78E-18 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 PRINTS PR00154 AMP-binding signature 690 701 2.5E-5 T 11-10-2018 IPR020459 AMP-binding UP17_03515 6cdbeacc63327416474268afc1e41529 1572 PRINTS PR00154 AMP-binding signature 702 710 2.5E-5 T 11-10-2018 IPR020459 AMP-binding UP17_03515 6cdbeacc63327416474268afc1e41529 1572 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1076 1091 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Pfam PF00668 Condensation domain 97 538 1.8E-102 T 11-10-2018 IPR001242 Condensation domain UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Pfam PF00668 Condensation domain 1131 1516 2.6E-53 T 11-10-2018 IPR001242 Condensation domain UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Gene3D G3DSA:3.30.559.30 1301 1521 4.8E-33 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Gene3D G3DSA:3.40.50.12780 543 941 3.1E-116 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Gene3D G3DSA:3.30.559.30 279 523 1.2E-111 T 11-10-2018 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Gene3D G3DSA:1.10.1200.10 1051 1121 3.2E-18 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03515 6cdbeacc63327416474268afc1e41529 1572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 695 706 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Pfam PF00501 AMP-binding enzyme 559 947 2.0E-91 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 Gene3D G3DSA:3.30.559.10 98 465 1.2E-111 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03515 6cdbeacc63327416474268afc1e41529 1572 SUPERFAMILY SSF52777 1131 1305 5.67E-26 T 11-10-2018 UP17_24945 61715ef06787a4aad1b636c0072b4328 656 SUPERFAMILY SSF64182 338 630 6.93E-68 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily UP17_24945 61715ef06787a4aad1b636c0072b4328 656 Gene3D G3DSA:3.30.450.20 52 161 6.2E-34 T 11-10-2018 UP17_24945 61715ef06787a4aad1b636c0072b4328 656 Pfam PF01368 DHH family 339 496 2.6E-23 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_24945 61715ef06787a4aad1b636c0072b4328 656 SMART SM00267 132 299 1.1E-5 T 11-10-2018 IPR000160 GGDEF domain UP17_24945 61715ef06787a4aad1b636c0072b4328 656 Gene3D G3DSA:3.90.1640.10 322 540 4.8E-53 T 11-10-2018 UP17_24945 61715ef06787a4aad1b636c0072b4328 656 Gene3D G3DSA:3.10.310.30 543 652 1.1E-9 T 11-10-2018 UP17_24945 61715ef06787a4aad1b636c0072b4328 656 PIRSF PIRSF026583 1 656 2.6E-267 T 11-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA UP17_24945 61715ef06787a4aad1b636c0072b4328 656 Pfam PF02272 DHHA1 domain 518 645 3.9E-15 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 UP17_16700 444ed1eff9fad5ba2968f14ad3c49cd5 319 Gene3D G3DSA:3.40.50.300 109 316 8.4E-77 T 11-10-2018 UP17_16700 444ed1eff9fad5ba2968f14ad3c49cd5 319 Pfam PF02562 PhoH-like protein 113 316 7.1E-97 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 UP17_16700 444ed1eff9fad5ba2968f14ad3c49cd5 319 SUPERFAMILY SSF52540 112 291 2.78E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 Gene3D G3DSA:1.20.5.100 197 228 6.1E-19 T 11-10-2018 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 SUPERFAMILY SSF51735 1 192 5.29E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 PIRSF PIRSF000124 1 431 1.1E-142 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 PIRSF PIRSF500134 1 434 1.4E-175 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 SUPERFAMILY SSF52413 301 420 3.27E-35 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 Gene3D G3DSA:3.40.50.720 1 196 3.1E-73 T 11-10-2018 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 8.7E-39 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 SMART SM00984 313 415 6.9E-46 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 2.4E-64 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 4.8E-144 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 Gene3D G3DSA:3.40.50.720 229 437 9.7E-76 T 11-10-2018 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 414 3.9E-32 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 UP17_12720 ecf1acfada79c28818fe14b80ecfdf56 439 SUPERFAMILY SSF48179 197 295 1.19E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_01835 c0468c0c4aab17b1f9d4c3d544784811 438 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 26 380 1.3E-120 T 11-10-2018 IPR018778 Type VII secretion system EssB UP17_01835 c0468c0c4aab17b1f9d4c3d544784811 438 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 6 380 2.4E-124 T 11-10-2018 IPR018778 Type VII secretion system EssB UP17_01835 c0468c0c4aab17b1f9d4c3d544784811 438 Gene3D G3DSA:1.25.40.680 239 399 1.6E-54 T 11-10-2018 UP17_01835 c0468c0c4aab17b1f9d4c3d544784811 438 Gene3D G3DSA:1.10.510.10 1 216 2.0E-81 T 11-10-2018 UP17_15205 7f2e4934b67b8be410883b5d2300dd1a 521 Gene3D G3DSA:1.20.1730.10 21 465 5.2E-57 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_15205 7f2e4934b67b8be410883b5d2300dd1a 521 Pfam PF00474 Sodium:solute symporter family 33 434 1.8E-100 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_15205 7f2e4934b67b8be410883b5d2300dd1a 521 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_15205 7f2e4934b67b8be410883b5d2300dd1a 521 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 5.0E-69 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 SUPERFAMILY SSF47384 276 343 5.69E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 SUPERFAMILY SSF55874 349 493 3.54E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 SMART SM00388 282 347 1.3E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 Gene3D G3DSA:1.10.287.130 285 344 2.5E-15 T 11-10-2018 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 Gene3D G3DSA:3.30.450.20 48 223 1.0E-33 T 11-10-2018 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 454 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 1.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 Gene3D G3DSA:3.30.565.10 349 499 1.9E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 Gene3D G3DSA:3.30.450.20 71 172 1.0E-33 T 11-10-2018 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 493 1.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 343 1.2E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_06740 0eb3d15681b60b1934bbd9d130ca2a73 505 SMART SM00387 389 495 3.1E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF08239 Bacterial SH3 domain 356 406 2.8E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF08239 Bacterial SH3 domain 125 175 1.7E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF08239 Bacterial SH3 domain 515 566 5.6E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF08239 Bacterial SH3 domain 433 483 1.6E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF08239 Bacterial SH3 domain 48 98 4.5E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF08239 Bacterial SH3 domain 202 252 2.8E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF08239 Bacterial SH3 domain 279 329 2.8E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:2.30.30.40 423 482 1.0E-15 T 11-10-2018 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:2.30.30.40 506 565 5.7E-17 T 11-10-2018 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:2.30.30.40 269 328 9.0E-17 T 11-10-2018 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:2.30.30.40 114 174 3.9E-16 T 11-10-2018 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:2.30.30.40 346 405 9.0E-17 T 11-10-2018 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:2.30.30.40 37 97 1.7E-16 T 11-10-2018 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:2.30.30.40 192 251 9.9E-17 T 11-10-2018 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00047 722 874 5.5E-45 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 623 687 1.1 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 268 332 2.3E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 504 569 9.8E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 39 101 2.1E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 345 409 2.3E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 114 178 1.7E-12 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 422 486 3.2E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 SMART SM00287 191 255 3.5E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 735 866 4.8E-12 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 UP17_21610 22c22f960dc309ca172c5319f7cf403a 883 Gene3D G3DSA:1.10.530.10 730 871 7.2E-6 T 11-10-2018 UP17_02435 eea5c96c11962995070bd47c97e224d3 166 Pfam PF14489 QueF-like protein 63 141 3.7E-35 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 UP17_02435 eea5c96c11962995070bd47c97e224d3 166 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 166 71.546 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 UP17_02435 eea5c96c11962995070bd47c97e224d3 166 SUPERFAMILY SSF55620 29 136 7.26E-28 T 11-10-2018 UP17_02435 eea5c96c11962995070bd47c97e224d3 166 Gene3D G3DSA:3.30.1130.10 22 166 5.6E-68 T 11-10-2018 UP17_02435 eea5c96c11962995070bd47c97e224d3 166 PIRSF PIRSF027377 8 148 4.9E-62 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 UP17_02435 eea5c96c11962995070bd47c97e224d3 166 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 29 140 1.5E-54 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 6.7E-41 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 Gene3D G3DSA:1.10.287.10 2 89 1.3E-36 T 11-10-2018 UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 Pfam PF00312 Ribosomal protein S15 8 88 5.5E-38 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 SUPERFAMILY SSF47060 3 89 8.54E-37 T 11-10-2018 IPR009068 S15/NS1, RNA-binding UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 SMART SM01387 8 88 3.5E-52 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 9.0E-35 T 11-10-2018 UP17_08020 df9b6c0dfe9103cf73899454bd302e65 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.566 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_02295 ed9ee404da86a1245967c8c5e0434586 286 SUPERFAMILY SSF160964 4 41 3.66E-5 T 11-10-2018 UP17_02295 ed9ee404da86a1245967c8c5e0434586 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 282 4.1E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_02295 ed9ee404da86a1245967c8c5e0434586 286 SUPERFAMILY SSF161098 49 272 3.79E-54 T 11-10-2018 IPR035906 MetI-like superfamily UP17_02295 ed9ee404da86a1245967c8c5e0434586 286 Gene3D G3DSA:1.10.3720.10 45 284 4.0E-60 T 11-10-2018 IPR035906 MetI-like superfamily UP17_20795 59b3a650a006425f13ab30dce51f9345 343 Pfam PF00487 Fatty acid desaturase 51 291 1.8E-34 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 Pfam PF06725 3D domain 337 396 1.0E-21 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 Pfam PF03990 Domain of unknown function (DUF348) 99 136 6.7E-12 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 Pfam PF03990 Domain of unknown function (DUF348) 40 80 1.1E-12 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 Pfam PF03990 Domain of unknown function (DUF348) 155 193 1.1E-11 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 SMART SM01208 207 285 3.9E-25 T 11-10-2018 IPR011098 G5 domain UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 Pfam PF07501 G5 domain 212 284 6.9E-19 T 11-10-2018 IPR011098 G5 domain UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 Gene3D G3DSA:2.40.40.10 294 386 7.6E-6 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 SUPERFAMILY SSF50685 338 385 2.86E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_00240 88cb63f6e26b72810994db4fb70dfc83 397 Gene3D G3DSA:2.20.230.10 158 285 1.7E-17 T 11-10-2018 UP17_00975 8a4b36b574dd181e9f9aaabcd45f515e 207 Pfam PF13490 Putative zinc-finger 3 38 1.5E-7 T 11-10-2018 IPR027383 Putative zinc-finger UP17_00975 8a4b36b574dd181e9f9aaabcd45f515e 207 Gene3D G3DSA:1.10.10.1320 2 94 4.0E-7 T 11-10-2018 UP17_07665 e886da83f97b830df64d728b78010295 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 1.7E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07665 e886da83f97b830df64d728b78010295 115 Pfam PF01245 Ribosomal protein L19 3 112 2.5E-53 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07665 e886da83f97b830df64d728b78010295 115 SUPERFAMILY SSF50104 1 114 2.81E-48 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily UP17_07665 e886da83f97b830df64d728b78010295 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 32.32 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07665 e886da83f97b830df64d728b78010295 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07665 e886da83f97b830df64d728b78010295 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07665 e886da83f97b830df64d728b78010295 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07665 e886da83f97b830df64d728b78010295 115 PIRSF PIRSF002191 1 115 3.2E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07665 e886da83f97b830df64d728b78010295 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07665 e886da83f97b830df64d728b78010295 115 Gene3D G3DSA:2.30.30.790 3 115 6.3E-15 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_14875 b306eca8e4f354f9a5e9127a7b69b109 246 Gene3D G3DSA:1.10.10.10 1 74 2.7E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_14875 b306eca8e4f354f9a5e9127a7b69b109 246 Gene3D G3DSA:3.30.450.40 75 246 5.5E-39 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_14875 b306eca8e4f354f9a5e9127a7b69b109 246 SUPERFAMILY SSF46785 1 77 7.04E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_14875 b306eca8e4f354f9a5e9127a7b69b109 246 SMART SM00346 1 93 5.4E-8 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_14875 b306eca8e4f354f9a5e9127a7b69b109 246 SUPERFAMILY SSF55781 71 244 8.5E-36 T 11-10-2018 UP17_14875 b306eca8e4f354f9a5e9127a7b69b109 246 Pfam PF01614 Bacterial transcriptional regulator 121 239 1.6E-20 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal UP17_14875 b306eca8e4f354f9a5e9127a7b69b109 246 Pfam PF09339 IclR helix-turn-helix domain 3 56 1.3E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_19600 acb0a667f72a2a4ace80bd9dfede1e19 336 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 12 332 47.205 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 UP17_19600 acb0a667f72a2a4ace80bd9dfede1e19 336 PIRSF PIRSF001555 8 336 3.9E-148 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 UP17_19600 acb0a667f72a2a4ace80bd9dfede1e19 336 Gene3D G3DSA:3.30.930.10 14 332 8.6E-137 T 11-10-2018 UP17_19600 acb0a667f72a2a4ace80bd9dfede1e19 336 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 22 328 1.3E-108 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 UP17_19600 acb0a667f72a2a4ace80bd9dfede1e19 336 SUPERFAMILY SSF55681 17 329 4.52E-87 T 11-10-2018 UP17_19600 acb0a667f72a2a4ace80bd9dfede1e19 336 Pfam PF03590 Aspartate-ammonia ligase 22 246 3.4E-98 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 UP17_00635 a7e81eb689923e095517d48e1f76c263 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00635 a7e81eb689923e095517d48e1f76c263 166 SUPERFAMILY SSF160369 4 160 6.28E-56 T 11-10-2018 UP17_00635 a7e81eb689923e095517d48e1f76c263 166 Pfam PF00466 Ribosomal protein L10 6 101 6.0E-31 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 UP17_00635 a7e81eb689923e095517d48e1f76c263 166 Gene3D G3DSA:3.30.70.1730 2 164 8.9E-45 T 11-10-2018 UP17_00635 a7e81eb689923e095517d48e1f76c263 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.925 T 11-10-2018 IPR022973 Ribosomal protein L10 UP17_21650 18210a0a0ab934cfb9654f46d577121e 132 Gene3D G3DSA:3.30.720.100 6 71 2.4E-29 T 11-10-2018 UP17_21650 18210a0a0ab934cfb9654f46d577121e 132 PIRSF PIRSF021700 1 132 1.4E-41 T 11-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase UP17_21650 18210a0a0ab934cfb9654f46d577121e 132 Gene3D G3DSA:3.30.720.110 72 131 1.0E-29 T 11-10-2018 UP17_21650 18210a0a0ab934cfb9654f46d577121e 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 2 129 6.1E-39 T 11-10-2018 IPR028973 PhnB-like UP17_21650 18210a0a0ab934cfb9654f46d577121e 132 SUPERFAMILY SSF54593 1 130 6.48E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 2.0E-110 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 Gene3D G3DSA:3.40.1190.20 1 306 1.6E-108 T 11-10-2018 IPR029056 Ribokinase-like UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 Pfam PF00294 pfkB family carbohydrate kinase 11 284 9.9E-57 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 2.6E-109 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 SUPERFAMILY SSF53613 1 300 1.14E-67 T 11-10-2018 IPR029056 Ribokinase-like UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 PIRSF PIRSF000535 1 303 1.3E-94 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 UP17_13975 7ea9ea557bbb68e88386bb43096ac073 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 SUPERFAMILY SSF52172 172 299 2.85E-25 T 11-10-2018 IPR011006 CheY-like superfamily UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 SMART SM00260 13 149 9.8E-28 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 Gene3D G3DSA:2.40.50.180 34 149 4.7E-33 T 11-10-2018 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 SUPERFAMILY SSF50341 7 151 9.02E-34 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 Pfam PF00072 Response regulator receiver domain 176 295 1.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 Gene3D G3DSA:2.30.30.40 19 143 4.7E-33 T 11-10-2018 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 Pfam PF01584 CheW-like domain 18 150 6.1E-31 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 Gene3D G3DSA:3.40.50.2300 168 300 1.4E-26 T 11-10-2018 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 SMART SM00448 174 295 3.7E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_06835 c7be1360dc52da223d7d5009dbba4a5d 300 PIRSF PIRSF002867 1 300 5.7E-99 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV UP17_25585 131203f3c5d2c0789fae167f94e6e3e4 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 1.3E-44 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_25585 131203f3c5d2c0789fae167f94e6e3e4 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 8.7E-111 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_25585 131203f3c5d2c0789fae167f94e6e3e4 442 SUPERFAMILY SSF56672 36 400 6.47E-55 T 11-10-2018 UP17_25585 131203f3c5d2c0789fae167f94e6e3e4 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.1E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_25135 131203f3c5d2c0789fae167f94e6e3e4 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 1.3E-44 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_25135 131203f3c5d2c0789fae167f94e6e3e4 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 8.7E-111 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_25135 131203f3c5d2c0789fae167f94e6e3e4 442 SUPERFAMILY SSF56672 36 400 6.47E-55 T 11-10-2018 UP17_25135 131203f3c5d2c0789fae167f94e6e3e4 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.1E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_03125 131203f3c5d2c0789fae167f94e6e3e4 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 1.3E-44 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_03125 131203f3c5d2c0789fae167f94e6e3e4 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 8.7E-111 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_03125 131203f3c5d2c0789fae167f94e6e3e4 442 SUPERFAMILY SSF56672 36 400 6.47E-55 T 11-10-2018 UP17_03125 131203f3c5d2c0789fae167f94e6e3e4 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.1E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_00390 330b060201ee86b1505e45dabc21ab48 464 Pfam PF01171 PP-loop family 22 206 2.5E-53 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 Gene3D G3DSA:1.20.59.30 248 331 3.5E-28 T 11-10-2018 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 209 3.0E-55 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 SMART SM00977 385 459 3.3E-17 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 SUPERFAMILY SSF52402 9 238 4.19E-58 T 11-10-2018 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 385 430 1.6E-16 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 SUPERFAMILY SSF82829 218 325 3.14E-12 T 11-10-2018 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 Gene3D G3DSA:3.40.50.620 8 239 2.5E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_00390 330b060201ee86b1505e45dabc21ab48 464 Pfam PF11734 TilS substrate C-terminal domain 385 443 6.1E-12 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 SUPERFAMILY SSF56037 375 444 1.18E-14 T 11-10-2018 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 Pfam PF09179 TilS substrate binding domain 260 318 7.1E-6 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UP17_00390 330b060201ee86b1505e45dabc21ab48 464 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 320 23.504 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Gene3D G3DSA:3.30.1370.10 550 621 2.1E-21 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SUPERFAMILY SSF54211 5 144 5.57E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SMART SM00316 620 690 2.7E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SUPERFAMILY SSF54791 555 640 5.31E-24 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 692 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Pfam PF00013 KH domain 556 614 8.4E-11 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Pfam PF01138 3' exoribonuclease family, domain 1 323 456 1.5E-16 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 1.5E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 693 31.007 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SMART SM00322 552 617 6.5E-13 T 11-10-2018 IPR004087 K Homology domain GO:0003676 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Gene3D G3DSA:3.30.230.70 1 230 5.6E-85 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SUPERFAMILY SSF50249 621 698 6.34E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SUPERFAMILY SSF55666 145 236 3.09E-30 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Gene3D G3DSA:3.30.230.70 235 549 4.7E-119 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 1.6E-17 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Pfam PF00575 S1 RNA binding domain 621 690 2.4E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Pfam PF03725 3' exoribonuclease family, domain 2 459 527 1.5E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 6.2E-16 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SUPERFAMILY SSF54211 291 488 1.87E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_08025 de07e11d9b82123c09588030243bd3ce 705 PIRSF PIRSF005499 2 705 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 SUPERFAMILY SSF55666 450 548 6.31E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 UP17_08025 de07e11d9b82123c09588030243bd3ce 705 Gene3D G3DSA:2.40.50.140 622 693 2.0E-25 T 11-10-2018 UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 Gene3D G3DSA:1.10.60.10 74 142 1.1E-30 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 125 5.8E-18 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 Gene3D G3DSA:1.10.10.10 2 73 2.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 SUPERFAMILY SSF47979 63 133 3.61E-18 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 SUPERFAMILY SSF46785 3 62 2.32E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 60 1.7E-23 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 43.63 T 11-10-2018 IPR022897 HTH-type transcription regulator MntR UP17_14465 8d8e36a711d6156a2f4e9e5eab7c2f8a 142 SMART SM00529 24 122 7.0E-36 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 Gene3D G3DSA:1.10.287.130 73 184 6.8E-24 T 11-10-2018 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 SMART SM00388 123 189 1.1E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 SMART SM00387 233 344 4.9E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 188 2.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 Gene3D G3DSA:3.30.565.10 198 344 5.5E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 SUPERFAMILY SSF158472 76 120 3.92E-5 T 11-10-2018 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 4.0E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 323 4.0E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 4.0E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 342 4.0E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 342 1.1E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 SUPERFAMILY SSF55874 178 343 8.64E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01015 ddc1e9c5af3b2ab87aab5e3253c42e65 344 SUPERFAMILY SSF47384 107 189 5.49E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 SUPERFAMILY SSF53474 13 277 5.45E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 Pfam PF00561 alpha/beta hydrolase fold 25 258 9.2E-29 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 PRINTS PR00412 Epoxide hydrolase signature 219 235 3.8E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 PRINTS PR00412 Epoxide hydrolase signature 51 66 3.8E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 PRINTS PR00412 Epoxide hydrolase signature 31 49 3.8E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 PRINTS PR00412 Epoxide hydrolase signature 253 275 3.8E-12 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 9.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 9.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 9.9E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_08755 0b4f8dfce244d65362ef5d8cec24b4c7 278 Gene3D G3DSA:3.40.50.1820 1 278 1.8E-94 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 Pfam PF00072 Response regulator receiver domain 4 113 7.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 SUPERFAMILY SSF46894 121 220 1.98E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 SMART SM00448 2 112 1.4E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 3.3E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 SUPERFAMILY SSF52172 1 123 3.27E-39 T 11-10-2018 IPR011006 CheY-like superfamily UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 Gene3D G3DSA:3.40.50.12740 2 134 5.3E-40 T 11-10-2018 UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 Gene3D G3DSA:1.10.10.10 135 223 6.4E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04780 8fa403c9809d65bd8e7ee38789133ec3 224 SMART SM00862 143 220 2.0E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 Gene3D G3DSA:3.40.50.300 135 317 7.1E-58 T 11-10-2018 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 Pfam PF13426 PAS domain 26 125 2.3E-10 T 11-10-2018 IPR000014 PAS domain UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.0E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 129 3.1E-12 T 11-10-2018 IPR000014 PAS domain UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 Pfam PF00158 Sigma-54 interaction domain 148 313 3.3E-60 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 Gene3D G3DSA:1.10.10.60 426 469 1.3E-15 T 11-10-2018 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 SMART SM00382 168 310 1.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 Gene3D G3DSA:3.30.450.20 13 125 1.8E-15 T 11-10-2018 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 SUPERFAMILY SSF46689 360 467 1.18E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 SMART SM00091 14 82 5.1E-4 T 11-10-2018 IPR000014 PAS domain UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 360 369 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 1.4E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 1.4E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 SUPERFAMILY SSF52540 148 391 9.57E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 Gene3D G3DSA:1.10.8.60 318 383 6.6E-23 T 11-10-2018 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_19120 0fab7a756f46db468f7cdab0a861af6d 470 SUPERFAMILY SSF55785 18 120 3.24E-13 T 11-10-2018 IPR035965 PAS domain superfamily UP17_09980 50ced50f58913d61892e8ba062ca240b 251 Pfam PF09339 IclR helix-turn-helix domain 7 57 2.8E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_09980 50ced50f58913d61892e8ba062ca240b 251 SMART SM00346 5 93 1.9E-24 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_09980 50ced50f58913d61892e8ba062ca240b 251 SUPERFAMILY SSF55781 61 247 2.94E-41 T 11-10-2018 UP17_09980 50ced50f58913d61892e8ba062ca240b 251 SUPERFAMILY SSF46785 6 76 3.33E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09980 50ced50f58913d61892e8ba062ca240b 251 Gene3D G3DSA:3.30.450.40 77 250 1.3E-47 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_09980 50ced50f58913d61892e8ba062ca240b 251 Gene3D G3DSA:1.10.10.10 4 76 2.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09980 50ced50f58913d61892e8ba062ca240b 251 Pfam PF01614 Bacterial transcriptional regulator 121 244 8.4E-30 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 9.3E-138 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 SMART SM00840 353 416 4.7E-17 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 Pfam PF09190 DALR domain 353 412 2.6E-16 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 SUPERFAMILY SSF52374 3 312 1.56E-103 T 11-10-2018 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.2E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.2E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.2E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.2E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 SUPERFAMILY SSF47323 317 464 1.05E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 38.905 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 Gene3D G3DSA:3.40.50.620 1 305 5.0E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 Gene3D G3DSA:1.20.120.640 306 464 6.6E-35 T 11-10-2018 UP17_00590 bbc9c8dcc1fb206f9f000f8af6184feb 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 2.0E-190 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 UP17_15935 04297022c60dd6ed29235c9542a00c82 516 SUPERFAMILY SSF52096 244 516 3.32E-89 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_15935 04297022c60dd6ed29235c9542a00c82 516 Gene3D G3DSA:3.90.226.10 263 516 7.3E-90 T 11-10-2018 UP17_15935 04297022c60dd6ed29235c9542a00c82 516 SUPERFAMILY SSF52096 4 257 6.3E-78 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_15935 04297022c60dd6ed29235c9542a00c82 516 Pfam PF01039 Carboxyl transferase domain 29 514 1.9E-196 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 UP17_15935 04297022c60dd6ed29235c9542a00c82 516 Gene3D G3DSA:3.90.226.10 2 259 5.9E-95 T 11-10-2018 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 SUPERFAMILY SSF55120 45 238 5.04E-48 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 Gene3D G3DSA:3.30.70.1560 128 215 1.6E-30 T 11-10-2018 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 Gene3D G3DSA:3.10.290.10 1 54 2.6E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 SUPERFAMILY SSF55174 2 67 1.3E-15 T 11-10-2018 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 Gene3D G3DSA:3.30.70.580 55 127 2.0E-27 T 11-10-2018 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 SMART SM00363 2 59 5.4E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 1.6E-52 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 Pfam PF00849 RNA pseudouridylate synthase 62 196 5.2E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_15640 f5c093d24697e22fe69ca6458a7c4c80 246 Pfam PF01479 S4 domain 2 48 3.2E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 PIRSF PIRSF000429 1 394 1.1E-117 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 Pfam PF02803 Thiolase, C-terminal domain 271 391 1.6E-44 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 Gene3D G3DSA:3.40.47.10 5 276 1.1E-141 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 SUPERFAMILY SSF53901 4 269 5.76E-80 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 SUPERFAMILY SSF53901 271 392 2.88E-36 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 3.5E-138 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 Gene3D G3DSA:3.40.47.10 126 390 1.1E-141 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_24335 dd9e67c0e085c621c7f25c8a93fb0bcc 396 Pfam PF00108 Thiolase, N-terminal domain 5 263 2.3E-93 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 264 2.5E-38 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 SUPERFAMILY SSF51735 3 159 3.14E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 PIRSF PIRSF000193 2 268 2.1E-81 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 SUPERFAMILY SSF48179 162 267 1.87E-35 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.408 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 Gene3D G3DSA:3.40.50.720 1 164 1.3E-48 T 11-10-2018 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 2.4E-16 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 264 8.7E-84 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_04605 a8b01ecb0a74428fe782dd62eabe1b50 268 Gene3D G3DSA:1.10.3730.10 165 268 7.3E-39 T 11-10-2018 UP17_09170 fe68d706677d5323ee114f2b0e077e3f 472 Pfam PF03606 C4-dicarboxylate anaerobic carrier 19 467 1.3E-100 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 UP17_25810 aad41a5ecf3544465b7a581fa1c16cf1 65 Gene3D G3DSA:4.10.810.10 11 65 1.8E-20 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 UP17_25810 aad41a5ecf3544465b7a581fa1c16cf1 65 SMART SM00914 25 61 3.5E-10 T 11-10-2018 IPR014957 IDEAL domain UP17_25810 aad41a5ecf3544465b7a581fa1c16cf1 65 Pfam PF08858 IDEAL domain 25 61 3.3E-14 T 11-10-2018 IPR014957 IDEAL domain UP17_24330 1054975d556a6e7283de6976b160b824 285 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 3.8E-36 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_24330 1054975d556a6e7283de6976b160b824 285 PIRSF PIRSF000105 1 285 9.0E-94 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 UP17_24330 1054975d556a6e7283de6976b160b824 285 SUPERFAMILY SSF51735 1 185 4.51E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_24330 1054975d556a6e7283de6976b160b824 285 Gene3D G3DSA:3.40.50.720 1 188 5.9E-74 T 11-10-2018 UP17_24330 1054975d556a6e7283de6976b160b824 285 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_24330 1054975d556a6e7283de6976b160b824 285 SUPERFAMILY SSF48179 185 284 4.85E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_24330 1054975d556a6e7283de6976b160b824 285 Gene3D G3DSA:1.10.1040.10 189 285 3.1E-35 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_24330 1054975d556a6e7283de6976b160b824 285 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 2.7E-67 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_04300 14ebab539287d2ff220bdac2f0aff14d 253 SUPERFAMILY SSF53639 15 234 3.34E-68 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily UP17_04300 14ebab539287d2ff220bdac2f0aff14d 253 Gene3D G3DSA:3.40.225.10 5 252 4.9E-85 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily UP17_04300 14ebab539287d2ff220bdac2f0aff14d 253 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 25 204 1.8E-51 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal UP17_04300 14ebab539287d2ff220bdac2f0aff14d 253 SMART SM01007 24 204 2.2E-62 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 SUPERFAMILY SSF53795 132 299 3.36E-40 T 11-10-2018 UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 Gene3D G3DSA:3.40.50.300 131 310 5.3E-76 T 11-10-2018 UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 41.739 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 302 3.9E-117 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 Pfam PF02603 HPr Serine kinase N terminus 4 127 1.4E-37 T 11-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 SUPERFAMILY SSF75138 3 131 3.66E-38 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 1.7E-77 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 UP17_23610 8af2e558e6f82a1f0a8f0fc550654c6e 311 Gene3D G3DSA:3.40.1390.20 3 130 3.4E-41 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily UP17_18335 885d8026f2516fb8745f5dfa34776b38 266 Gene3D G3DSA:3.40.50.10330 31 266 2.9E-73 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 UP17_18335 885d8026f2516fb8745f5dfa34776b38 266 Gene3D G3DSA:2.60.200.30 108 244 2.9E-73 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 UP17_18335 885d8026f2516fb8745f5dfa34776b38 266 SUPERFAMILY SSF111331 15 265 7.52E-56 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily UP17_18335 885d8026f2516fb8745f5dfa34776b38 266 Pfam PF01513 ATP-NAD kinase 40 251 1.6E-17 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 UP17_18335 885d8026f2516fb8745f5dfa34776b38 266 Hamap MF_00361 NAD kinase [nadK]. 4 266 20.127 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 Pfam PF00664 ABC transporter transmembrane region 20 292 1.7E-43 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 SUPERFAMILY SSF90123 6 319 1.03E-72 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 SUPERFAMILY SSF52540 331 574 5.53E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 Pfam PF00005 ABC transporter 354 501 5.6E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 Gene3D G3DSA:1.20.1560.10 2 319 1.0E-78 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 Gene3D G3DSA:3.40.50.300 331 582 2.2E-83 T 11-10-2018 UP17_05325 30c7ebe7e59f0c2abbf7419ec1eb239c 583 SMART SM00382 363 549 4.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 470 5.9E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 Pfam PF00672 HAMP domain 188 234 8.2E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 SUPERFAMILY SSF47384 237 313 3.73E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 SUPERFAMILY SSF158472 189 235 4.18E-9 T 11-10-2018 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 Gene3D G3DSA:3.30.565.10 318 471 5.8E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 Gene3D G3DSA:1.20.1480.50 140 240 7.0E-9 T 11-10-2018 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 Gene3D G3DSA:1.10.287.130 241 317 2.1E-15 T 11-10-2018 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 SMART SM00304 186 238 8.5E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 SMART SM00387 363 474 8.9E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 SMART SM00388 246 313 2.9E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 311 6.7E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 6.0E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 452 6.0E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 6.0E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_08500 48da83cf8c2ca3c4b7b6de378cdc8edf 474 SUPERFAMILY SSF55874 305 470 2.1E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_19730 c88490d1509135d541e1b625ba790899 556 Gene3D G3DSA:1.10.8.60 423 502 8.5E-26 T 11-10-2018 UP17_19730 c88490d1509135d541e1b625ba790899 556 Gene3D G3DSA:3.40.50.300 236 422 6.5E-66 T 11-10-2018 UP17_19730 c88490d1509135d541e1b625ba790899 556 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 520 537 1.2E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19730 c88490d1509135d541e1b625ba790899 556 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 537 556 1.2E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19730 c88490d1509135d541e1b625ba790899 556 Pfam PF02954 Bacterial regulatory protein, Fis family 515 554 6.6E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19730 c88490d1509135d541e1b625ba790899 556 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 111 177 1.5E-6 T 11-10-2018 IPR000014 PAS domain UP17_19730 c88490d1509135d541e1b625ba790899 556 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 465 474 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_19730 c88490d1509135d541e1b625ba790899 556 SUPERFAMILY SSF55785 112 207 1.08E-10 T 11-10-2018 IPR035965 PAS domain superfamily UP17_19730 c88490d1509135d541e1b625ba790899 556 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 338 353 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_19730 c88490d1509135d541e1b625ba790899 556 Pfam PF00158 Sigma-54 interaction domain 251 419 1.1E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_19730 c88490d1509135d541e1b625ba790899 556 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 275 288 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_19730 c88490d1509135d541e1b625ba790899 556 SUPERFAMILY SSF46689 464 556 1.23E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19730 c88490d1509135d541e1b625ba790899 556 Gene3D G3DSA:1.10.10.60 503 556 1.1E-16 T 11-10-2018 UP17_19730 c88490d1509135d541e1b625ba790899 556 SMART SM00382 271 415 7.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_19730 c88490d1509135d541e1b625ba790899 556 SUPERFAMILY SSF52540 251 495 1.86E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_19730 c88490d1509135d541e1b625ba790899 556 Gene3D G3DSA:3.30.450.20 109 210 4.0E-13 T 11-10-2018 UP17_07760 4002ff1335794b8e5c892abf704a6860 150 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 2 150 1.8E-46 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 UP17_07760 4002ff1335794b8e5c892abf704a6860 150 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 101 147 1.0E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UP17_07760 4002ff1335794b8e5c892abf704a6860 150 Pfam PF00460 Flagella basal body rod protein 7 33 6.5E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 SMART SM00422 5 75 7.8E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 Pfam PF06445 GyrI-like small molecule binding domain 196 271 4.8E-9 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 SUPERFAMILY SSF46955 5 109 5.86E-28 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 SMART SM00871 122 271 9.0E-5 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 Gene3D G3DSA:3.20.80.10 121 271 1.5E-22 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 Pfam PF13411 MerR HTH family regulatory protein 5 73 2.3E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 Gene3D G3DSA:1.10.1660.10 3 113 4.6E-29 T 11-10-2018 UP17_03295 7ba49256af69272b1f75bfc9fbdfd2f1 272 SUPERFAMILY SSF55136 123 270 5.93E-35 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_17490 ce7cc35633816033365815b6b692816b 177 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 83 153 6.0E-24 T 11-10-2018 IPR004173 3H domain GO:0036094 UP17_17490 ce7cc35633816033365815b6b692816b 177 SUPERFAMILY SSF46785 9 67 9.54E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_17490 ce7cc35633816033365815b6b692816b 177 Pfam PF02829 3H domain 79 175 8.5E-32 T 11-10-2018 IPR004173 3H domain GO:0036094 UP17_17490 ce7cc35633816033365815b6b692816b 177 PIRSF PIRSF037847 7 177 6.4E-63 T 11-10-2018 IPR026043 Transcription repressor NadR UP17_17490 ce7cc35633816033365815b6b692816b 177 SUPERFAMILY SSF75500 75 176 4.18E-33 T 11-10-2018 IPR035922 3H domain superfamily UP17_17490 ce7cc35633816033365815b6b692816b 177 Pfam PF08279 HTH domain 12 64 4.6E-13 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 UP17_17490 ce7cc35633816033365815b6b692816b 177 Gene3D G3DSA:3.30.1340.20 73 177 3.3E-33 T 11-10-2018 IPR035922 3H domain superfamily UP17_17490 ce7cc35633816033365815b6b692816b 177 Gene3D G3DSA:1.10.10.10 1 67 8.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 4.0E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 4.0E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.0E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.0E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.0E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.0E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.0E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 SUPERFAMILY SSF56059 128 399 2.3E-104 T 11-10-2018 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Gene3D G3DSA:3.30.470.20 662 931 1.5E-83 T 11-10-2018 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Gene3D G3DSA:3.30.470.20 120 401 2.6E-118 T 11-10-2018 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Gene3D G3DSA:3.40.50.20 1 116 1.2E-45 T 11-10-2018 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 831 838 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 SMART SM01096 420 543 1.3E-57 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 543 9.5E-39 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1023 12.289 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 SUPERFAMILY SSF56059 669 928 1.13E-78 T 11-10-2018 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 975 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Gene3D G3DSA:3.40.50.20 550 658 3.7E-45 T 11-10-2018 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 SUPERFAMILY SSF48108 394 549 3.14E-46 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 SUPERFAMILY SSF52440 552 671 3.31E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Gene3D G3DSA:1.10.1030.10 404 549 3.9E-43 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 SUPERFAMILY SSF52440 1 127 2.73E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 8.6E-79 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 864 2.2E-36 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_05885 fa0b0d2429eeabc0ac2bdd34817f2cc1 1039 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 UP17_02090 60b14063b3f069b11edaae523d301508 191 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 182 7.7E-41 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 161 2.0E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 Gene3D G3DSA:3.30.1330.10 1 167 1.9E-70 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 SUPERFAMILY SSF55326 3 167 1.45E-52 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 SUPERFAMILY SSF56042 169 339 4.34E-58 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 Gene3D G3DSA:3.90.650.10 168 341 4.4E-70 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 339 1.1E-34 T 11-10-2018 IPR010918 PurM-like, C-terminal domain UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 340 47.689 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_01990 0a2a68d9f30979337a029a1c9ce48fa8 341 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 1.3E-140 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_04760 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 Gene3D G3DSA:3.30.420.10 92 246 3.3E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_04760 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 Pfam PF00665 Integrase core domain 96 209 3.9E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_04760 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 Pfam PF13276 HTH-like domain 12 73 9.0E-13 T 11-10-2018 IPR025948 HTH-like domain UP17_04760 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 SUPERFAMILY SSF53098 90 253 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_08665 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 Gene3D G3DSA:3.30.420.10 92 246 3.3E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_08665 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 Pfam PF00665 Integrase core domain 96 209 3.9E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_08665 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 Pfam PF13276 HTH-like domain 12 73 9.0E-13 T 11-10-2018 IPR025948 HTH-like domain UP17_08665 a9cdbfcb27eb4fc7db5b3c60d1d0af6f 257 SUPERFAMILY SSF53098 90 253 2.88E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_00415 1982509dd90c236613b8986d5e9f1dab 298 Gene3D G3DSA:3.10.50.40 157 250 1.9E-32 T 11-10-2018 UP17_00415 1982509dd90c236613b8986d5e9f1dab 298 SUPERFAMILY SSF54534 149 247 1.05E-20 T 11-10-2018 UP17_00415 1982509dd90c236613b8986d5e9f1dab 298 Gene3D G3DSA:1.10.4030.30 59 263 1.9E-32 T 11-10-2018 UP17_00415 1982509dd90c236613b8986d5e9f1dab 298 SUPERFAMILY SSF109998 39 186 7.06E-25 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily UP17_00415 1982509dd90c236613b8986d5e9f1dab 298 Pfam PF13145 PPIC-type PPIASE domain 137 262 1.2E-18 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 UP17_00415 1982509dd90c236613b8986d5e9f1dab 298 Pfam PF13624 SurA N-terminal domain 62 125 9.6E-7 T 11-10-2018 UP17_20195 b967acaa13ef8d728b7146b41a22c0e6 185 Pfam PF06338 ComK protein 5 153 6.5E-24 T 11-10-2018 IPR010461 Competence protein ComK GO:0030420 UP17_18445 bcf7584f6d14bb80316a5c3c4ecb4e2d 210 PIRSF PIRSF021278 3 210 3.6E-85 T 11-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 UP17_18445 bcf7584f6d14bb80316a5c3c4ecb4e2d 210 SUPERFAMILY SSF55729 43 122 2.83E-8 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_18445 bcf7584f6d14bb80316a5c3c4ecb4e2d 210 Pfam PF00583 Acetyltransferase (GNAT) family 34 118 3.9E-6 T 11-10-2018 IPR000182 GNAT domain UP17_18445 bcf7584f6d14bb80316a5c3c4ecb4e2d 210 Gene3D G3DSA:3.40.630.30 1 210 3.2E-82 T 11-10-2018 UP17_20090 5a6697e8dec6a2e65b94a96d150090df 69 SUPERFAMILY SSF47345 6 59 1.83E-6 T 11-10-2018 IPR035900 Colicin E immunity protein superfamily UP17_20090 5a6697e8dec6a2e65b94a96d150090df 69 Gene3D G3DSA:1.10.1200.20 3 69 5.3E-6 T 11-10-2018 IPR035900 Colicin E immunity protein superfamily UP17_20090 5a6697e8dec6a2e65b94a96d150090df 69 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 6 61 3.1E-6 T 11-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 UP17_07585 cef53a63b638dc450b790296d751d9db 683 SMART SM00487 253 442 1.3E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_07585 cef53a63b638dc450b790296d751d9db 683 Pfam PF17191 RecG wedge domain 9 163 2.5E-16 T 11-10-2018 IPR033454 RecG, wedge domain UP17_07585 cef53a63b638dc450b790296d751d9db 683 SUPERFAMILY SSF52540 173 436 4.22E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07585 cef53a63b638dc450b790296d751d9db 683 Gene3D G3DSA:3.40.50.300 441 614 4.0E-56 T 11-10-2018 UP17_07585 cef53a63b638dc450b790296d751d9db 683 Pfam PF00271 Helicase conserved C-terminal domain 453 573 4.0E-21 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_07585 cef53a63b638dc450b790296d751d9db 683 Gene3D G3DSA:3.40.50.300 198 434 1.7E-88 T 11-10-2018 UP17_07585 cef53a63b638dc450b790296d751d9db 683 SMART SM00490 493 574 5.8E-23 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_07585 cef53a63b638dc450b790296d751d9db 683 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 648 2.2E-246 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 UP17_07585 cef53a63b638dc450b790296d751d9db 683 SUPERFAMILY SSF50249 4 168 3.6E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_07585 cef53a63b638dc450b790296d751d9db 683 Gene3D G3DSA:2.40.50.140 45 136 1.4E-10 T 11-10-2018 UP17_07585 cef53a63b638dc450b790296d751d9db 683 SUPERFAMILY SSF52540 369 638 1.04E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07585 cef53a63b638dc450b790296d751d9db 683 Pfam PF00270 DEAD/DEAH box helicase 258 415 3.0E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.0E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 Pfam PF07729 FCD domain 95 218 7.3E-19 T 11-10-2018 IPR011711 GntR, C-terminal UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 SUPERFAMILY SSF48008 92 223 5.23E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 SUPERFAMILY SSF46785 5 78 2.2E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 SMART SM00345 15 74 1.6E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 SMART SM00895 95 219 5.5E-16 T 11-10-2018 IPR011711 GntR, C-terminal UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 Gene3D G3DSA:1.20.120.530 89 223 1.9E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_04480 b4d4c9a999d8f8f20ba16c7c95c268f9 225 Gene3D G3DSA:1.10.10.10 7 74 4.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00550 Phosphopantetheine attachment site 1596 1655 4.1E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00550 Phosphopantetheine attachment site 465 524 1.8E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00550 Phosphopantetheine attachment site 549 607 3.0E-11 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 ProSitePatterns PS00012 Phosphopantetheine attachment site. 485 500 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 2122 2321 1.38E-33 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF47336 1589 1658 2.62E-14 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 196 429 2.45E-40 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 2308 2545 1.11E-40 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.300.30 1477 1583 2.3E-29 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.30 2307 2552 6.2E-91 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.30 190 428 3.1E-92 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:1.10.1200.10 543 612 2.5E-14 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.10 2130 2494 6.2E-91 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1231 1242 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 1862 2068 2.11E-19 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00501 AMP-binding enzyme 1092 1483 2.1E-92 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 628 805 5.78E-36 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:1.10.1200.10 1592 1663 1.3E-16 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF47336 541 607 6.15E-12 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF47336 465 524 2.09E-10 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1111 1507 7.5E-119 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.30 809 1052 1.1E-110 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.10 628 998 1.1E-110 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.10 1664 1844 6.5E-47 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 812 1058 6.56E-45 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.10 11 376 3.1E-92 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.40.50.12780 1077 1476 1.6E-118 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 4 183 4.84E-36 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF52777 1668 1849 6.67E-32 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00668 Condensation domain 6 425 8.9E-80 T 11-10-2018 IPR001242 Condensation domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00668 Condensation domain 2124 2549 2.7E-79 T 11-10-2018 IPR001242 Condensation domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00668 Condensation domain 626 1069 8.6E-92 T 11-10-2018 IPR001242 Condensation domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Pfam PF00668 Condensation domain 1673 2079 1.9E-69 T 11-10-2018 IPR001242 Condensation domain UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:1.10.1200.10 462 526 1.8E-13 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 Gene3D G3DSA:3.30.559.30 1845 2068 3.9E-38 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 SUPERFAMILY SSF56801 1050 1606 3.27E-138 T 11-10-2018 UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 ProSitePatterns PS00012 Phosphopantetheine attachment site. 566 581 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_03520 a9fac577df882362924fd2ad1e10db45 2561 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1618 1633 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_12865 413abf60d9d7c4767856ae30fb57fc53 478 Gene3D G3DSA:3.40.50.2000 250 455 8.9E-181 T 11-10-2018 UP17_12865 413abf60d9d7c4767856ae30fb57fc53 478 SUPERFAMILY SSF53756 3 475 1.26E-128 T 11-10-2018 UP17_12865 413abf60d9d7c4767856ae30fb57fc53 478 Pfam PF08323 Starch synthase catalytic domain 2 237 7.7E-86 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 UP17_12865 413abf60d9d7c4767856ae30fb57fc53 478 Gene3D G3DSA:3.40.50.2000 3 470 8.9E-181 T 11-10-2018 UP17_12865 413abf60d9d7c4767856ae30fb57fc53 478 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 473 3.9E-176 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 UP17_12865 413abf60d9d7c4767856ae30fb57fc53 478 Pfam PF00534 Glycosyl transferases group 1 285 433 4.3E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_12865 413abf60d9d7c4767856ae30fb57fc53 478 Hamap MF_00484 Glycogen synthase [glgA]. 1 473 46.79 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 Pfam PF14306 PUA-like domain 8 165 8.9E-56 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 SUPERFAMILY SSF88697 8 169 1.29E-51 T 11-10-2018 IPR015947 PUA-like superfamily UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 10 383 1.1E-139 T 11-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 31 388 51.473 T 11-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 SUPERFAMILY SSF52374 174 384 1.69E-85 T 11-10-2018 UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 Gene3D G3DSA:3.10.400.10 8 165 5.7E-51 T 11-10-2018 UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 Pfam PF01747 ATP-sulfurylase 174 384 2.4E-93 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_13300 5bc705e8bcfee9ae7a58473ce6fc9e66 392 Gene3D G3DSA:3.40.50.620 174 386 8.6E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_15225 f13a6b8251ce6937bbd91653373b384d 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_15225 f13a6b8251ce6937bbd91653373b384d 504 Gene3D G3DSA:3.40.309.10 259 449 3.9E-179 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_15225 f13a6b8251ce6937bbd91653373b384d 504 SUPERFAMILY SSF53720 5 482 5.89E-166 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_15225 f13a6b8251ce6937bbd91653373b384d 504 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 9 492 1.7E-236 T 11-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 UP17_15225 f13a6b8251ce6937bbd91653373b384d 504 Gene3D G3DSA:3.40.605.10 13 476 3.9E-179 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_15225 f13a6b8251ce6937bbd91653373b384d 504 Pfam PF00171 Aldehyde dehydrogenase family 17 478 3.5E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_15225 f13a6b8251ce6937bbd91653373b384d 504 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_07320 4498786c14b8334aa801ef94646ac928 302 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 200 299 2.7E-29 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_07320 4498786c14b8334aa801ef94646ac928 302 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 302 89.759 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_07320 4498786c14b8334aa801ef94646ac928 302 Gene3D G3DSA:3.90.78.10 217 302 5.4E-34 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_07320 4498786c14b8334aa801ef94646ac928 302 Gene3D G3DSA:3.30.43.10 1 88 1.3E-29 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 UP17_07320 4498786c14b8334aa801ef94646ac928 302 Pfam PF01565 FAD binding domain 35 165 5.5E-24 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UP17_07320 4498786c14b8334aa801ef94646ac928 302 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 5.2E-97 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_07320 4498786c14b8334aa801ef94646ac928 302 SUPERFAMILY SSF56176 21 210 4.35E-43 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_07320 4498786c14b8334aa801ef94646ac928 302 Gene3D G3DSA:3.30.465.10 89 216 6.4E-46 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 UP17_07320 4498786c14b8334aa801ef94646ac928 302 SUPERFAMILY SSF56194 196 300 3.14E-37 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_02160 e19433c1a21f6c4ca9d950f3280cb35c 168 SUPERFAMILY SSF103642 147 167 1.41E-8 T 11-10-2018 UP17_02160 e19433c1a21f6c4ca9d950f3280cb35c 168 Gene3D G3DSA:3.10.450.50 30 168 1.1E-9 T 11-10-2018 UP17_02160 e19433c1a21f6c4ca9d950f3280cb35c 168 Pfam PF02810 SEC-C motif 149 166 5.8E-11 T 11-10-2018 IPR004027 SEC-C motif UP17_10910 9b898610ecc95b157c3850c2e7d704c2 312 SUPERFAMILY SSF54593 1 257 1.31E-42 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_10910 9b898610ecc95b157c3850c2e7d704c2 312 Gene3D G3DSA:3.10.180.10 1 121 4.5E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_10910 9b898610ecc95b157c3850c2e7d704c2 312 Gene3D G3DSA:3.10.180.10 134 281 9.8E-44 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_10910 9b898610ecc95b157c3850c2e7d704c2 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 139 249 3.8E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_10910 9b898610ecc95b157c3850c2e7d704c2 312 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 96 9.3E-8 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_10315 4ec5b1342d2a91c5aaeec41cdd671f94 337 Gene3D G3DSA:3.40.50.300 1 236 1.4E-79 T 11-10-2018 UP17_10315 4ec5b1342d2a91c5aaeec41cdd671f94 337 Pfam PF00005 ABC transporter 19 159 5.6E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_10315 4ec5b1342d2a91c5aaeec41cdd671f94 337 Pfam PF08402 TOBE domain 257 337 6.1E-8 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 UP17_10315 4ec5b1342d2a91c5aaeec41cdd671f94 337 SMART SM00382 28 209 3.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_10315 4ec5b1342d2a91c5aaeec41cdd671f94 337 SUPERFAMILY SSF52540 4 242 2.05E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10315 4ec5b1342d2a91c5aaeec41cdd671f94 337 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_22205 a1bf78a26047155ce7dc8b8a64e5cf48 248 SUPERFAMILY SSF109635 3 89 1.96E-12 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily UP17_22205 a1bf78a26047155ce7dc8b8a64e5cf48 248 Gene3D G3DSA:1.20.120.910 1 126 3.8E-28 T 11-10-2018 UP17_22205 a1bf78a26047155ce7dc8b8a64e5cf48 248 SUPERFAMILY SSF57716 90 120 1.21E-6 T 11-10-2018 UP17_22205 a1bf78a26047155ce7dc8b8a64e5cf48 248 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 163 1.4E-49 T 11-10-2018 IPR014240 Regulatory protein, YteA family UP17_22205 a1bf78a26047155ce7dc8b8a64e5cf48 248 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 116 2.9E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 383 1.1E-172 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 385 47.396 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 55 371 7.1E-50 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 SUPERFAMILY SSF53686 8 383 6.42E-134 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 PIRSF PIRSF001413 1 387 1.5E-153 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 Gene3D G3DSA:3.40.50.1100 12 208 1.8E-169 T 11-10-2018 UP17_05715 b0c3e1e4e35f5895cea0647904ef512f 387 Gene3D G3DSA:3.40.50.1100 56 378 1.8E-169 T 11-10-2018 UP17_07550 6e2d3633829f3569b44ea03d2f0ce515 217 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 6 213 1.3E-58 T 11-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 UP17_07550 6e2d3633829f3569b44ea03d2f0ce515 217 Gene3D G3DSA:3.40.50.10240 1 217 2.3E-75 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 UP17_07550 6e2d3633829f3569b44ea03d2f0ce515 217 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 23 118 2.9E-19 T 11-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 UP17_07550 6e2d3633829f3569b44ea03d2f0ce515 217 SMART SM00983 145 211 5.4E-23 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 UP17_07550 6e2d3633829f3569b44ea03d2f0ce515 217 SUPERFAMILY SSF63862 138 215 7.85E-13 T 11-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 UP17_07550 6e2d3633829f3569b44ea03d2f0ce515 217 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 154 210 2.5E-17 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 UP17_07550 6e2d3633829f3569b44ea03d2f0ce515 217 SUPERFAMILY SSF63999 3 125 3.27E-31 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 UP17_04810 a1d975713f306d06f110e1eede57d0e8 183 Pfam PF02417 Chromate transporter 11 175 1.0E-34 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 UP17_15835 ed6019624f914c12dc209e9f0c0d810a 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 102 1.5E-26 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 UP17_15835 ed6019624f914c12dc209e9f0c0d810a 107 SUPERFAMILY SSF89360 1 102 1.44E-25 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_15835 ed6019624f914c12dc209e9f0c0d810a 107 Gene3D G3DSA:2.60.300.12 1 96 2.5E-7 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 Gene3D G3DSA:3.30.1330.90 13 137 3.5E-21 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 1.5E-89 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 Gene3D G3DSA:3.30.70.260 139 217 2.3E-15 T 11-10-2018 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 SUPERFAMILY SSF55021 138 216 9.16E-17 T 11-10-2018 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 PIRSF PIRSF036692 1 220 1.8E-102 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 SUPERFAMILY SSF143548 19 136 7.72E-32 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 Pfam PF03315 Serine dehydratase beta chain 5 74 1.8E-11 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_11915 0c8b9472b1e69b762081f89f71f22268 220 Pfam PF01842 ACT domain 149 210 4.0E-10 T 11-10-2018 IPR002912 ACT domain UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 324 5.8E-117 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 Pfam PF00579 tRNA synthetases class I (W and Y) 3 276 2.0E-83 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 Gene3D G3DSA:1.10.240.10 183 293 9.6E-135 T 11-10-2018 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 SUPERFAMILY SSF52374 2 324 1.08E-97 T 11-10-2018 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 325 41.451 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 5.5E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 5.5E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 5.5E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 5.5E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 UP17_05975 7ae3a45cdf0adb9e92b2c4947fabbe94 328 Gene3D G3DSA:3.40.50.620 4 323 9.6E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_03425 4eae927bd65d150063491e1203c2f280 446 Pfam PF00324 Amino acid permease 14 445 1.2E-106 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_03425 4eae927bd65d150063491e1203c2f280 446 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_03425 4eae927bd65d150063491e1203c2f280 446 Gene3D G3DSA:1.20.1740.10 4 446 1.5E-64 T 11-10-2018 UP17_03425 4eae927bd65d150063491e1203c2f280 446 PIRSF PIRSF006060 1 446 4.8E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 Gene3D G3DSA:2.170.120.12 50 170 5.9E-87 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 1.2E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 5.0E-25 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 SUPERFAMILY SSF56553 50 171 1.24E-42 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 3.1E-123 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 SUPERFAMILY SSF55257 5 230 3.14E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 SMART SM00662 20 227 4.8E-102 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 2.1E-29 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 36.877 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 Gene3D G3DSA:3.30.1360.10 17 221 5.9E-87 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 SUPERFAMILY SSF47789 247 313 1.31E-24 T 11-10-2018 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 151 3.6E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00820 70cd8e08a2a610f85706ecdd56ea9119 314 Gene3D G3DSA:1.10.150.20 237 314 2.0E-34 T 11-10-2018 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 Pfam PF00119 ATP synthase A chain 22 231 1.0E-56 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 SUPERFAMILY SSF81336 74 231 1.44E-40 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 Gene3D G3DSA:1.20.120.220 73 238 5.2E-41 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 237 13.691 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 15 233 5.3E-48 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 ProSitePatterns PS00449 ATP synthase a subunit signature. 167 176 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 PRINTS PR00123 ATP synthase A subunit signature 164 186 6.3E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 PRINTS PR00123 ATP synthase A subunit signature 80 96 6.3E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 PRINTS PR00123 ATP synthase A subunit signature 217 232 6.3E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24175 457a517ade67395fa225dd2eaa5ef020 238 PRINTS PR00123 ATP synthase A subunit signature 148 163 6.3E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 Pfam PF12538 DNA transporter 3 115 1.4E-20 T 11-10-2018 IPR022206 Firmicutes EssC, N-terminal UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 Gene3D G3DSA:3.40.50.300 616 957 8.9E-82 T 11-10-2018 UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 SUPERFAMILY SSF52540 988 1167 4.7E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 Pfam PF01580 FtsK/SpoIIIE family 981 1158 5.2E-20 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 Pfam PF01580 FtsK/SpoIIIE family 640 855 8.9E-32 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 Gene3D G3DSA:3.40.50.300 375 520 1.7E-5 T 11-10-2018 UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 205 1481 0.0 T 11-10-2018 IPR023839 Firmicutes EssC, C-terminal UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 Gene3D G3DSA:3.40.50.300 958 1243 2.0E-64 T 11-10-2018 UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 SUPERFAMILY SSF52540 631 893 1.96E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 Gene3D G3DSA:3.40.50.300 1252 1484 1.4E-24 T 11-10-2018 UP17_01840 ac496f980a05ddea26d893288e8cb76c 1493 SUPERFAMILY SSF52540 1258 1405 5.32E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03725 749b554c23eaad0225955002e137c458 141 Pfam PF00582 Universal stress protein family 5 141 1.0E-28 T 11-10-2018 IPR006016 UspA UP17_03725 749b554c23eaad0225955002e137c458 141 Gene3D G3DSA:3.40.50.620 3 141 2.4E-31 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_03725 749b554c23eaad0225955002e137c458 141 PRINTS PR01438 Universal stress protein signature 119 141 4.7E-17 T 11-10-2018 IPR006015 Universal stress protein A UP17_03725 749b554c23eaad0225955002e137c458 141 PRINTS PR01438 Universal stress protein signature 3 21 4.7E-17 T 11-10-2018 IPR006015 Universal stress protein A UP17_03725 749b554c23eaad0225955002e137c458 141 PRINTS PR01438 Universal stress protein signature 102 114 4.7E-17 T 11-10-2018 IPR006015 Universal stress protein A UP17_03725 749b554c23eaad0225955002e137c458 141 SUPERFAMILY SSF52402 5 141 1.74E-31 T 11-10-2018 UP17_11260 f18d2beb81dd665f49aad1ff2f420c4b 375 SUPERFAMILY SSF54506 169 366 1.13E-52 T 11-10-2018 UP17_11260 f18d2beb81dd665f49aad1ff2f420c4b 375 Gene3D G3DSA:3.10.310.10 165 349 1.7E-137 T 11-10-2018 UP17_11260 f18d2beb81dd665f49aad1ff2f420c4b 375 Gene3D G3DSA:3.10.310.10 3 363 1.7E-137 T 11-10-2018 UP17_11260 f18d2beb81dd665f49aad1ff2f420c4b 375 SUPERFAMILY SSF54506 2 163 3.61E-61 T 11-10-2018 UP17_11260 f18d2beb81dd665f49aad1ff2f420c4b 375 Pfam PF04303 PrpF protein 1 365 1.1E-137 T 11-10-2018 IPR007400 PrpF protein UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 Pfam PF00814 Glycoprotease family 27 309 1.7E-102 T 11-10-2018 IPR000905 Gcp-like domain UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 Gene3D G3DSA:3.30.420.40 7 318 5.4E-122 T 11-10-2018 UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 1.1E-49 T 11-10-2018 IPR017861 Kae1/TsaD family UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 1.1E-49 T 11-10-2018 IPR017861 Kae1/TsaD family UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 1.1E-49 T 11-10-2018 IPR017861 Kae1/TsaD family UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 1.1E-49 T 11-10-2018 IPR017861 Kae1/TsaD family UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 1.1E-49 T 11-10-2018 IPR017861 Kae1/TsaD family UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 1.1E-49 T 11-10-2018 IPR017861 Kae1/TsaD family UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 334 63.629 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 SUPERFAMILY SSF53067 105 311 1.16E-42 T 11-10-2018 UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 Gene3D G3DSA:3.30.420.40 132 296 5.4E-122 T 11-10-2018 UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 316 9.1E-132 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 SUPERFAMILY SSF53067 6 126 9.71E-31 T 11-10-2018 UP17_01530 da974de1a49a73da3195fcfb1931ee65 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 309 6.4E-106 T 11-10-2018 IPR017861 Kae1/TsaD family UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 4.1E-49 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.5E-30 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.576 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 Gene3D G3DSA:3.10.430.100 60 148 2.6E-32 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 Gene3D G3DSA:3.40.5.10 1 52 9.2E-25 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 SUPERFAMILY SSF55653 58 146 4.71E-28 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 5.3E-22 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24940 ab7035c0b94fb2b179c6ba0fc99fe1fa 149 SUPERFAMILY SSF55658 1 55 1.52E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal UP17_25460 8f823769c8de0d6af1b2e1564cc342d3 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 4.2E-103 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 UP17_25460 8f823769c8de0d6af1b2e1564cc342d3 187 Pfam PF00578 AhpC/TSA family 4 133 2.3E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_25460 8f823769c8de0d6af1b2e1564cc342d3 187 SUPERFAMILY SSF52833 1 187 3.41E-54 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_25460 8f823769c8de0d6af1b2e1564cc342d3 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 1.2E-4 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_25460 8f823769c8de0d6af1b2e1564cc342d3 187 PIRSF PIRSF000239 1 187 1.2E-49 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_25460 8f823769c8de0d6af1b2e1564cc342d3 187 Gene3D G3DSA:3.40.30.10 1 186 1.5E-59 T 11-10-2018 UP17_00700 9bc89564e824c65cf28c72ea50efdfc7 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 21.032 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 UP17_00700 9bc89564e824c65cf28c72ea50efdfc7 94 Gene3D G3DSA:3.30.70.330 1 94 2.3E-31 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily UP17_00700 9bc89564e824c65cf28c72ea50efdfc7 94 Pfam PF00276 Ribosomal protein L23 5 87 7.1E-32 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 UP17_00700 9bc89564e824c65cf28c72ea50efdfc7 94 SUPERFAMILY SSF54189 1 89 2.55E-30 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00700 9bc89564e824c65cf28c72ea50efdfc7 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Gene3D G3DSA:2.30.40.20 29 82 1.7E-74 T 11-10-2018 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 SUPERFAMILY SSF56672 7 242 9.78E-82 T 11-10-2018 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Pfam PF11798 IMS family HHH motif 176 205 3.8E-7 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Gene3D G3DSA:1.10.150.20 183 235 1.7E-74 T 11-10-2018 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Gene3D G3DSA:3.30.1490.100 250 357 1.1E-21 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Gene3D G3DSA:3.30.70.270 12 240 1.7E-74 T 11-10-2018 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Pfam PF00817 impB/mucB/samB family 15 162 3.3E-51 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 250 355 1.0E-18 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 PIRSF PIRSF036603 124 413 1.5E-14 T 11-10-2018 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 PIRSF PIRSF036603 4 126 8.5E-27 T 11-10-2018 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 SUPERFAMILY SSF100879 250 346 1.9E-23 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15925 22f135b6353deabfae4a6efb1f9f2cbc 424 Hamap MF_01113 DNA polymerase IV [dinB]. 9 361 37.143 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 UP17_12245 10b9da4a41fe467a54e28549d9fc8ca2 198 Gene3D G3DSA:1.10.357.10 12 197 8.0E-36 T 11-10-2018 UP17_12245 10b9da4a41fe467a54e28549d9fc8ca2 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 9.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_12245 10b9da4a41fe467a54e28549d9fc8ca2 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 9.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_12245 10b9da4a41fe467a54e28549d9fc8ca2 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 3.9E-18 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_12245 10b9da4a41fe467a54e28549d9fc8ca2 198 SUPERFAMILY SSF46689 10 81 6.16E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_07510 18b04ddb003a2663564a8ae51841e791 161 Pfam PF01327 Polypeptide deformylase 4 148 2.1E-48 T 11-10-2018 IPR023635 Peptide deformylase UP17_07510 18b04ddb003a2663564a8ae51841e791 161 Gene3D G3DSA:3.90.45.10 1 156 7.4E-58 T 11-10-2018 IPR036821 Peptide deformylase superfamily UP17_07510 18b04ddb003a2663564a8ae51841e791 161 SUPERFAMILY SSF56420 2 154 4.45E-53 T 11-10-2018 IPR036821 Peptide deformylase superfamily UP17_07510 18b04ddb003a2663564a8ae51841e791 161 Hamap MF_00163 Peptide deformylase [def]. 2 158 28.055 T 11-10-2018 IPR023635 Peptide deformylase UP17_07510 18b04ddb003a2663564a8ae51841e791 161 PRINTS PR01576 Peptide deformylase signature 33 62 9.1E-35 T 11-10-2018 IPR023635 Peptide deformylase UP17_07510 18b04ddb003a2663564a8ae51841e791 161 PRINTS PR01576 Peptide deformylase signature 88 99 9.1E-35 T 11-10-2018 IPR023635 Peptide deformylase UP17_07510 18b04ddb003a2663564a8ae51841e791 161 PRINTS PR01576 Peptide deformylase signature 100 118 9.1E-35 T 11-10-2018 IPR023635 Peptide deformylase UP17_07510 18b04ddb003a2663564a8ae51841e791 161 PRINTS PR01576 Peptide deformylase signature 119 148 9.1E-35 T 11-10-2018 IPR023635 Peptide deformylase UP17_07510 18b04ddb003a2663564a8ae51841e791 161 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 157 9.7E-52 T 11-10-2018 IPR023635 Peptide deformylase UP17_07510 18b04ddb003a2663564a8ae51841e791 161 PIRSF PIRSF004749 1 161 2.4E-49 T 11-10-2018 IPR023635 Peptide deformylase UP17_21540 c90cf8127e8184e5f5486e24b0d94798 277 SUPERFAMILY SSF52091 164 261 1.9E-15 T 11-10-2018 IPR036513 STAS domain superfamily UP17_21540 c90cf8127e8184e5f5486e24b0d94798 277 Pfam PF01740 STAS domain 173 270 6.8E-12 T 11-10-2018 IPR002645 STAS domain UP17_21540 c90cf8127e8184e5f5486e24b0d94798 277 Gene3D G3DSA:3.30.750.24 163 277 1.5E-31 T 11-10-2018 IPR036513 STAS domain superfamily UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 SMART SM00883 1 93 2.7E-55 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 Gene3D G3DSA:2.30.33.40 1 93 2.3E-38 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 8.9E-37 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 SUPERFAMILY SSF50129 2 93 3.41E-35 T 11-10-2018 IPR011032 GroES-like superfamily UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 26.676 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 PRINTS PR00297 10kDa chaperonin signature 24 45 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 PRINTS PR00297 10kDa chaperonin signature 59 71 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 PRINTS PR00297 10kDa chaperonin signature 2 17 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UP17_01560 127b0774a01caae6c33df07b82f5ac2a 94 PRINTS PR00297 10kDa chaperonin signature 80 93 1.9E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 UP17_05590 57c14ebd784263e23aa9b02e2499b296 140 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 11-10-2018 IPR019808 Histidine triad, conserved site UP17_05590 57c14ebd784263e23aa9b02e2499b296 140 Gene3D G3DSA:3.30.428.10 1 140 4.3E-51 T 11-10-2018 IPR036265 HIT-like superfamily UP17_05590 57c14ebd784263e23aa9b02e2499b296 140 PRINTS PR00332 Histidine triad family signature 5 21 7.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein UP17_05590 57c14ebd784263e23aa9b02e2499b296 140 PRINTS PR00332 Histidine triad family signature 26 44 7.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein UP17_05590 57c14ebd784263e23aa9b02e2499b296 140 PRINTS PR00332 Histidine triad family signature 93 103 7.0E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein UP17_05590 57c14ebd784263e23aa9b02e2499b296 140 Pfam PF01230 HIT domain 12 106 9.9E-29 T 11-10-2018 IPR001310 Histidine triad (HIT) protein UP17_05590 57c14ebd784263e23aa9b02e2499b296 140 SUPERFAMILY SSF54197 2 138 6.1E-48 T 11-10-2018 IPR036265 HIT-like superfamily UP17_01080 e7c7ad01ec4a868ecb6c6ea68a5a260a 494 Gene3D G3DSA:1.10.4160.10 1 468 4.3E-103 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily UP17_01080 e7c7ad01ec4a868ecb6c6ea68a5a260a 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 15 434 1.4E-56 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 UP17_06165 7b5bcb765a30073a30cc9993d1ad4fc1 171 Gene3D G3DSA:3.90.1140.10 1 171 3.7E-42 T 11-10-2018 UP17_06165 7b5bcb765a30073a30cc9993d1ad4fc1 171 Pfam PF13563 2'-5' RNA ligase superfamily 11 154 7.9E-24 T 11-10-2018 UP17_06165 7b5bcb765a30073a30cc9993d1ad4fc1 171 Hamap MF_01444 Putative phosphoesterase . 1 169 38.525 T 11-10-2018 IPR022932 Putative phosphoesterase YjcG UP17_06165 7b5bcb765a30073a30cc9993d1ad4fc1 171 SUPERFAMILY SSF55144 1 168 2.44E-29 T 11-10-2018 IPR009097 Cyclic phosphodiesterase UP17_25045 d467d7d2852af13c01328ee7365f06f1 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 111 19.867 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UP17_25045 d467d7d2852af13c01328ee7365f06f1 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 UP17_25045 d467d7d2852af13c01328ee7365f06f1 118 Gene3D G3DSA:3.30.230.10 1 116 1.1E-35 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_25045 d467d7d2852af13c01328ee7365f06f1 118 SUPERFAMILY SSF54211 1 109 4.55E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_25045 d467d7d2852af13c01328ee7365f06f1 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 111 5.5E-31 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UP17_25045 d467d7d2852af13c01328ee7365f06f1 118 Pfam PF00825 Ribonuclease P 1 107 1.3E-32 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UP17_25045 d467d7d2852af13c01328ee7365f06f1 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 108 2.0E-35 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 UP17_20670 d55e9019c4731583d8df460dfb58943e 195 Pfam PF02525 Flavodoxin-like fold 1 186 1.9E-35 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_20670 d55e9019c4731583d8df460dfb58943e 195 Gene3D G3DSA:3.40.50.360 1 194 2.6E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_20670 d55e9019c4731583d8df460dfb58943e 195 SUPERFAMILY SSF52218 1 194 1.61E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_13315 60f7aae7c4dc4e93f032c61884934eda 240 SUPERFAMILY SSF53448 5 219 6.02E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_13315 60f7aae7c4dc4e93f032c61884934eda 240 Gene3D G3DSA:3.90.550.10 1 239 1.0E-62 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_13315 60f7aae7c4dc4e93f032c61884934eda 240 Pfam PF00535 Glycosyl transferase family 2 7 162 1.0E-27 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 Pfam PF01979 Amidohydrolase family 51 420 2.3E-51 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 44.733 T 11-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 SUPERFAMILY SSF51556 54 367 2.27E-112 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 Gene3D G3DSA:2.30.40.10 7 419 1.1E-154 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 Gene3D G3DSA:3.20.20.140 54 366 1.1E-154 T 11-10-2018 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 SUPERFAMILY SSF51338 1 427 1.27E-26 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_07435 7a2a1c1069d6507f1583a689233ab06e 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 17 423 6.1E-151 T 11-10-2018 UP17_17765 a4a76674c3d5c20eb18586ff3a01bdc2 118 Gene3D G3DSA:3.40.1440.10 16 118 2.6E-22 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_17765 a4a76674c3d5c20eb18586ff3a01bdc2 118 SUPERFAMILY SSF82771 18 114 8.63E-11 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_17765 a4a76674c3d5c20eb18586ff3a01bdc2 118 Pfam PF01541 GIY-YIG catalytic domain 18 113 2.7E-9 T 11-10-2018 IPR000305 GIY-YIG endonuclease UP17_18900 f0d0c932ab3e4ffdb3693aff00eb6161 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18900 f0d0c932ab3e4ffdb3693aff00eb6161 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18900 f0d0c932ab3e4ffdb3693aff00eb6161 189 SUPERFAMILY SSF46689 3 86 2.36E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_18900 f0d0c932ab3e4ffdb3693aff00eb6161 189 Gene3D G3DSA:1.10.357.10 2 183 1.7E-25 T 11-10-2018 UP17_18900 f0d0c932ab3e4ffdb3693aff00eb6161 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 1.5E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 SUPERFAMILY SSF55347 131 330 3.99E-72 T 11-10-2018 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 Gene3D G3DSA:3.30.360.10 130 326 4.8E-143 T 11-10-2018 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 Gene3D G3DSA:3.40.50.720 9 340 4.8E-143 T 11-10-2018 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 121 2.3E-34 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 PIRSF PIRSF000148 6 348 2.4E-132 T 11-10-2018 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 6 343 38.743 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 SUPERFAMILY SSF51735 7 159 2.91E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 329 8.7E-58 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 SMART SM00859 8 123 2.5E-45 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UP17_08060 2843cbc526e0204f3dc2c10f35bc721f 352 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 8 344 2.6E-160 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 Hamap MF_01685 Ferredoxin--NADP reductase. 7 329 45.246 T 11-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 295 2.9E-30 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 Gene3D G3DSA:3.50.50.60 7 305 2.5E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22990 00c91e73471940a062a9f89ffd888c89 330 Gene3D G3DSA:3.50.50.60 128 247 2.5E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.3E-18 T 11-10-2018 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.3E-18 T 11-10-2018 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.3E-18 T 11-10-2018 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 SUPERFAMILY SSF51905 8 316 9.61E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 8.8E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 8.8E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 8.8E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 8.8E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_22990 00c91e73471940a062a9f89ffd888c89 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 8.8E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_06815 f3d4aa9671b7a15019f44146a65bb758 380 SUPERFAMILY SSF53383 4 379 1.12E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_06815 f3d4aa9671b7a15019f44146a65bb758 380 Gene3D G3DSA:3.40.640.10 58 278 2.2E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_06815 f3d4aa9671b7a15019f44146a65bb758 380 Pfam PF00155 Aminotransferase class I and II 31 375 7.3E-64 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_06815 f3d4aa9671b7a15019f44146a65bb758 380 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 UP17_06815 f3d4aa9671b7a15019f44146a65bb758 380 Gene3D G3DSA:3.90.1150.10 30 375 2.2E-129 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_11565 d2c220d5b204d81ce4ec551bb63ca7cb 455 SUPERFAMILY SSF103473 11 431 2.49E-84 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_11565 d2c220d5b204d81ce4ec551bb63ca7cb 455 Gene3D G3DSA:1.20.1250.20 19 429 9.4E-76 T 11-10-2018 UP17_11565 d2c220d5b204d81ce4ec551bb63ca7cb 455 Pfam PF07690 Major Facilitator Superfamily 27 332 9.2E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_25025 e7e356206443617f046a5d1be798d669 461 Gene3D G3DSA:1.20.120.430 127 461 2.3E-107 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 UP17_25025 e7e356206443617f046a5d1be798d669 461 PRINTS PR00449 Transforming protein P21 ras signature 328 341 2.5E-5 T 11-10-2018 UP17_25025 e7e356206443617f046a5d1be798d669 461 PRINTS PR00449 Transforming protein P21 ras signature 264 286 2.5E-5 T 11-10-2018 UP17_25025 e7e356206443617f046a5d1be798d669 461 PRINTS PR00449 Transforming protein P21 ras signature 224 245 2.5E-5 T 11-10-2018 UP17_25025 e7e356206443617f046a5d1be798d669 461 Pfam PF12631 MnmE helical domain 129 458 5.4E-60 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 UP17_25025 e7e356206443617f046a5d1be798d669 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 1.5E-130 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 UP17_25025 e7e356206443617f046a5d1be798d669 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 126 3.0E-41 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 UP17_25025 e7e356206443617f046a5d1be798d669 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 461 34.578 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 UP17_25025 e7e356206443617f046a5d1be798d669 461 Pfam PF01926 50S ribosome-binding GTPase 227 338 5.1E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_25025 e7e356206443617f046a5d1be798d669 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 374 6.3E-28 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_25025 e7e356206443617f046a5d1be798d669 461 SUPERFAMILY SSF52540 80 378 7.43E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_25025 e7e356206443617f046a5d1be798d669 461 Gene3D G3DSA:3.30.1360.120 1 126 9.1E-48 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 UP17_25025 e7e356206443617f046a5d1be798d669 461 Gene3D G3DSA:3.40.50.300 224 389 2.3E-107 T 11-10-2018 UP17_24640 b456f2c549fd656b6f52a01efe1ba2f7 565 SMART SM00490 255 336 3.9E-32 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_24640 b456f2c549fd656b6f52a01efe1ba2f7 565 SUPERFAMILY SSF52540 71 356 1.21E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24640 b456f2c549fd656b6f52a01efe1ba2f7 565 Gene3D G3DSA:3.40.50.300 1 208 2.8E-74 T 11-10-2018 UP17_24640 b456f2c549fd656b6f52a01efe1ba2f7 565 Pfam PF00271 Helicase conserved C-terminal domain 228 336 2.3E-30 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_24640 b456f2c549fd656b6f52a01efe1ba2f7 565 Gene3D G3DSA:3.40.50.300 210 395 6.5E-51 T 11-10-2018 UP17_24640 b456f2c549fd656b6f52a01efe1ba2f7 565 SMART SM00487 21 214 7.9E-58 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_24640 b456f2c549fd656b6f52a01efe1ba2f7 565 Pfam PF00270 DEAD/DEAH box helicase 26 192 1.4E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_23390 b8a51dfcbde36c8ac2bcbab366980e4f 265 Gene3D G3DSA:3.40.140.10 116 265 3.8E-45 T 11-10-2018 UP17_23390 b8a51dfcbde36c8ac2bcbab366980e4f 265 SUPERFAMILY SSF53927 6 261 3.61E-75 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 UP17_23390 b8a51dfcbde36c8ac2bcbab366980e4f 265 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 262 32.18 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 UP17_23390 b8a51dfcbde36c8ac2bcbab366980e4f 265 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 262 1.0E-74 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 UP17_23390 b8a51dfcbde36c8ac2bcbab366980e4f 265 Gene3D G3DSA:3.10.20.10 28 110 1.5E-14 T 11-10-2018 UP17_23390 b8a51dfcbde36c8ac2bcbab366980e4f 265 Pfam PF02634 FdhD/NarQ family 26 261 9.8E-77 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 UP17_23390 b8a51dfcbde36c8ac2bcbab366980e4f 265 PIRSF PIRSF015626 1 264 6.5E-77 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 SUPERFAMILY SSF46689 329 379 4.93E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 Gene3D G3DSA:3.40.50.2300 1 138 3.9E-28 T 11-10-2018 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 330 372 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 SMART SM00342 293 376 1.0E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 Gene3D G3DSA:1.10.10.60 327 382 9.4E-17 T 11-10-2018 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 SUPERFAMILY SSF52172 2 121 2.13E-27 T 11-10-2018 IPR011006 CheY-like superfamily UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 SMART SM00448 1 115 3.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 345 360 5.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 360 376 5.5E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 Pfam PF12833 Helix-turn-helix domain 300 377 1.3E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 Gene3D G3DSA:1.10.10.60 276 326 4.6E-14 T 11-10-2018 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 SUPERFAMILY SSF46689 277 327 7.88E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13720 ac678a4da69f0ee6b3c6a642db979894 388 Pfam PF00072 Response regulator receiver domain 4 111 6.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_07640 43cf9a472a97ae98e64a996dd1cbd98e 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.9E-35 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07640 43cf9a472a97ae98e64a996dd1cbd98e 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.463 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07640 43cf9a472a97ae98e64a996dd1cbd98e 90 SUPERFAMILY SSF54565 2 86 1.57E-34 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07640 43cf9a472a97ae98e64a996dd1cbd98e 90 Gene3D G3DSA:3.30.1320.10 1 90 2.7E-37 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07640 43cf9a472a97ae98e64a996dd1cbd98e 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07640 43cf9a472a97ae98e64a996dd1cbd98e 90 Pfam PF00886 Ribosomal protein S16 9 67 6.0E-26 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 16 465 2.1E-171 T 11-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 Gene3D G3DSA:3.30.70.360 208 295 1.8E-169 T 11-10-2018 UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 SUPERFAMILY SSF55031 187 380 8.76E-50 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 SUPERFAMILY SSF53187 5 469 5.74E-65 T 11-10-2018 UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 Gene3D G3DSA:3.30.70.360 187 384 1.8E-169 T 11-10-2018 UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 Gene3D G3DSA:3.40.630.10 17 468 1.8E-169 T 11-10-2018 UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 117 156 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UP17_18590 208cb03d329e14305ac1701fa5cad57a 470 Pfam PF01546 Peptidase family M20/M25/M40 87 466 1.0E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_23225 484516b27e30342ee763753bf4174412 320 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 UP17_23225 484516b27e30342ee763753bf4174412 320 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 301 1.7E-26 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain UP17_23225 484516b27e30342ee763753bf4174412 320 Gene3D G3DSA:3.40.50.2300 158 285 1.7E-54 T 11-10-2018 UP17_23225 484516b27e30342ee763753bf4174412 320 SUPERFAMILY SSF53822 58 312 6.71E-53 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_23225 484516b27e30342ee763753bf4174412 320 Gene3D G3DSA:1.10.260.40 1 59 6.4E-19 T 11-10-2018 UP17_23225 484516b27e30342ee763753bf4174412 320 SUPERFAMILY SSF47413 1 60 9.27E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_23225 484516b27e30342ee763753bf4174412 320 SMART SM00354 1 71 5.2E-31 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_23225 484516b27e30342ee763753bf4174412 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_23225 484516b27e30342ee763753bf4174412 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_23225 484516b27e30342ee763753bf4174412 320 Gene3D G3DSA:3.40.50.2300 62 299 1.7E-54 T 11-10-2018 UP17_23225 484516b27e30342ee763753bf4174412 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.6E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 Gene3D G3DSA:1.10.10.10 1 84 1.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 SMART SM00345 19 78 7.2E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 SUPERFAMILY SSF53383 101 461 1.65E-82 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 3.8E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 Pfam PF00155 Aminotransferase class I and II 116 457 3.6E-17 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 2.1E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 2.1E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 Gene3D G3DSA:3.40.640.10 93 456 1.3E-120 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_21460 a1459dda4c08ffd510f3c64ee678b0c0 463 SUPERFAMILY SSF46785 9 79 7.22E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_14305 ca971a49c3a5dbeffc0ac4cbf68780cd 354 Gene3D G3DSA:2.60.120.260 253 342 2.4E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily UP17_14305 ca971a49c3a5dbeffc0ac4cbf68780cd 354 Gene3D G3DSA:3.40.50.1110 18 214 3.4E-19 T 11-10-2018 IPR036514 SGNH hydrolase superfamily UP17_14305 ca971a49c3a5dbeffc0ac4cbf68780cd 354 SUPERFAMILY SSF52266 40 217 2.75E-22 T 11-10-2018 UP17_14305 ca971a49c3a5dbeffc0ac4cbf68780cd 354 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 45 206 1.9E-12 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain UP17_07840 ee12441318baf22692925a50cf1ed487 120 Pfam PF00072 Response regulator receiver domain 5 116 1.1E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_07840 ee12441318baf22692925a50cf1ed487 120 SMART SM00448 3 115 8.3E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_07840 ee12441318baf22692925a50cf1ed487 120 Gene3D G3DSA:3.40.50.2300 2 120 2.7E-40 T 11-10-2018 UP17_07840 ee12441318baf22692925a50cf1ed487 120 SUPERFAMILY SSF52172 4 120 8.4E-41 T 11-10-2018 IPR011006 CheY-like superfamily UP17_16135 cf3ea21e952cb922c8ff3d5432331ba4 127 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 25 125 5.2E-37 T 11-10-2018 IPR014211 Stage III sporulation protein AD UP17_16135 cf3ea21e952cb922c8ff3d5432331ba4 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 1 55 1.5E-11 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family UP17_16135 cf3ea21e952cb922c8ff3d5432331ba4 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 69 124 1.4E-18 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family UP17_13515 c36cddc246c879c992a099b6a82e7a33 107 SUPERFAMILY SSF46785 6 104 2.1E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_13515 c36cddc246c879c992a099b6a82e7a33 107 Gene3D G3DSA:1.10.10.10 3 107 1.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13515 c36cddc246c879c992a099b6a82e7a33 107 Pfam PF01638 HxlR-like helix-turn-helix 16 103 5.7E-31 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type UP17_06445 eefcb765f3c43e511dffb196a4fb278a 173 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 7 155 3.2E-51 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW UP17_06445 eefcb765f3c43e511dffb196a4fb278a 173 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 4 157 1.1E-49 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW UP17_06445 eefcb765f3c43e511dffb196a4fb278a 173 Gene3D G3DSA:1.10.1760.20 3 167 5.6E-15 T 11-10-2018 UP17_06445 eefcb765f3c43e511dffb196a4fb278a 173 PIRSF PIRSF024534 1 164 8.9E-52 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 SMART SM00930 261 336 3.5E-18 T 11-10-2018 IPR018449 NIL domain UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 SMART SM00382 30 218 5.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 SUPERFAMILY SSF52540 1 240 6.44E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 Pfam PF09383 NIL domain 264 334 1.2E-17 T 11-10-2018 IPR018449 NIL domain UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 Pfam PF00005 ABC transporter 21 169 1.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 Gene3D G3DSA:3.30.70.260 233 338 8.3E-24 T 11-10-2018 UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 Gene3D G3DSA:3.40.50.300 1 232 2.3E-76 T 11-10-2018 UP17_20395 712a6497f5d38fd5ccade4fd81ca3897 340 SUPERFAMILY SSF55021 262 336 1.37E-17 T 11-10-2018 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 PIRSF PIRSF037215 1 410 4.5E-192 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 Pfam PF01546 Peptidase family M20/M25/M40 141 402 5.1E-13 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 7.7E-205 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 Hamap MF_00550 Peptidase T [pepT]. 2 406 58.99 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 Gene3D G3DSA:3.40.630.10 5 401 1.1E-182 T 11-10-2018 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 SUPERFAMILY SSF53187 3 405 7.93E-82 T 11-10-2018 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 SUPERFAMILY SSF55031 211 321 1.88E-40 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 Pfam PF07687 Peptidase dimerisation domain 209 308 1.7E-10 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 Gene3D G3DSA:3.30.70.360 211 321 1.1E-182 T 11-10-2018 UP17_24845 4f36f9810e627ab2f8a853bd065600ff 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UP17_16895 6e525459907552872d138998149f020e 596 Pfam PF08439 Oligopeptidase F 112 178 5.7E-12 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain UP17_16895 6e525459907552872d138998149f020e 596 Pfam PF01432 Peptidase family M3 331 574 5.1E-20 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 UP17_16895 6e525459907552872d138998149f020e 596 Gene3D G3DSA:1.20.140.70 18 173 4.1E-7 T 11-10-2018 UP17_16895 6e525459907552872d138998149f020e 596 Gene3D G3DSA:1.10.1370.20 219 593 1.7E-119 T 11-10-2018 UP17_16895 6e525459907552872d138998149f020e 596 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 6 588 2.9E-194 T 11-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 UP17_16895 6e525459907552872d138998149f020e 596 SUPERFAMILY SSF55486 52 589 7.7E-95 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 Gene3D G3DSA:1.10.275.10 27 231 7.4E-193 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal UP17_18275 a596238e459f057b80904c6712fcdb99 459 Gene3D G3DSA:1.10.40.30 362 434 7.4E-193 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 455 5.2E-205 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18275 a596238e459f057b80904c6712fcdb99 459 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 UP17_18275 a596238e459f057b80904c6712fcdb99 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 44.368 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18275 a596238e459f057b80904c6712fcdb99 459 Pfam PF00206 Lyase 8 302 2.0E-74 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal UP17_18275 a596238e459f057b80904c6712fcdb99 459 Gene3D G3DSA:1.20.200.10 121 447 7.4E-193 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 4.6E-68 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 4.6E-68 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 4.6E-68 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 4.6E-68 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 4.6E-68 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 4.6E-68 T 11-10-2018 UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family UP17_18275 a596238e459f057b80904c6712fcdb99 459 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family UP17_18275 a596238e459f057b80904c6712fcdb99 459 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 6.2E-23 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18275 a596238e459f057b80904c6712fcdb99 459 SUPERFAMILY SSF48557 5 456 4.24E-150 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 SUPERFAMILY SSF49464 911 1007 4.51E-16 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily UP17_06550 6ad20818f0029dd060fadf431a119333 1435 SUPERFAMILY SSF49899 636 787 1.01E-10 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Pfam PF05922 Peptidase inhibitor I9 65 174 1.4E-7 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Gene3D G3DSA:2.60.40.10 1157 1240 3.6E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Gene3D G3DSA:2.60.40.10 1243 1324 1.8E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Gene3D G3DSA:2.60.120.200 633 798 6.1E-6 T 11-10-2018 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Gene3D G3DSA:2.60.40.1120 834 906 2.4E-9 T 11-10-2018 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Gene3D G3DSA:2.60.40.1120 912 989 1.1E-14 T 11-10-2018 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 447 457 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Pfam PF00082 Subtilase family 215 501 4.6E-52 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 SUPERFAMILY SSF52743 161 510 7.2E-71 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Pfam PF13620 Carboxypeptidase regulatory-like domain 911 989 2.4E-13 T 11-10-2018 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 SUPERFAMILY SSF49464 844 906 1.2E-8 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Gene3D G3DSA:3.40.50.200 187 512 1.2E-77 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 Pfam PF05547 Immune inhibitor A peptidase M6 689 785 1.4E-12 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 UP17_06550 6ad20818f0029dd060fadf431a119333 1435 PRINTS PR00723 Subtilisin serine protease family (S8) signature 215 234 1.5E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_06550 6ad20818f0029dd060fadf431a119333 1435 PRINTS PR00723 Subtilisin serine protease family (S8) signature 267 280 1.5E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_06550 6ad20818f0029dd060fadf431a119333 1435 PRINTS PR00723 Subtilisin serine protease family (S8) signature 446 462 1.5E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_21085 a3157f9a3b1023759f2883dae23182af 158 Pfam PF03682 Uncharacterised protein family (UPF0158) 6 156 1.3E-12 T 11-10-2018 IPR005361 Uncharacterised protein family UPF0158 UP17_09400 475e4870c5302e70390c7336515b4f9a 381 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 264 355 2.3E-13 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain UP17_09400 475e4870c5302e70390c7336515b4f9a 381 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 240 7.8E-48 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 UP17_09400 475e4870c5302e70390c7336515b4f9a 381 Pfam PF00149 Calcineurin-like phosphoesterase 1 213 1.5E-18 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_09400 475e4870c5302e70390c7336515b4f9a 381 SUPERFAMILY SSF56300 1 317 3.49E-56 T 11-10-2018 UP17_09400 475e4870c5302e70390c7336515b4f9a 381 Gene3D G3DSA:3.60.21.10 1 259 5.3E-78 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 SUPERFAMILY SSF56322 17 460 5.76E-145 T 11-10-2018 IPR005801 ADC synthase GO:0009058 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 PRINTS PR00095 Anthranilate synthase component I signature 302 315 2.0E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 PRINTS PR00095 Anthranilate synthase component I signature 396 410 2.0E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 PRINTS PR00095 Anthranilate synthase component I signature 411 425 2.0E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 PRINTS PR00095 Anthranilate synthase component I signature 316 329 2.0E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 160 2.9E-32 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 Gene3D G3DSA:3.60.120.10 12 461 1.9E-162 T 11-10-2018 IPR005801 ADC synthase GO:0009058 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 20 461 5.9E-169 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_07005 f2853bbc6431d697fb89de4ed023e2d2 464 Pfam PF00425 chorismate binding enzyme 200 454 5.3E-96 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal UP17_04945 61faa5b9dc99e4cf24e037b19971766f 290 PIRSF PIRSF000105 1 288 3.1E-85 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 UP17_04945 61faa5b9dc99e4cf24e037b19971766f 290 SUPERFAMILY SSF51735 1 185 1.4E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_04945 61faa5b9dc99e4cf24e037b19971766f 290 SUPERFAMILY SSF48179 185 287 4.0E-32 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_04945 61faa5b9dc99e4cf24e037b19971766f 290 Gene3D G3DSA:3.40.50.720 1 188 8.6E-62 T 11-10-2018 UP17_04945 61faa5b9dc99e4cf24e037b19971766f 290 Gene3D G3DSA:1.10.1040.10 189 290 5.4E-32 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_04945 61faa5b9dc99e4cf24e037b19971766f 290 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 281 1.3E-31 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_04945 61faa5b9dc99e4cf24e037b19971766f 290 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 1.5E-57 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 1.3E-16 T 11-10-2018 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 1.3E-16 T 11-10-2018 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 1.3E-16 T 11-10-2018 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 1.3E-16 T 11-10-2018 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 1.3E-16 T 11-10-2018 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 Gene3D G3DSA:3.40.640.10 62 284 2.4E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 SUPERFAMILY SSF53383 1 390 5.85E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 Pfam PF00155 Aminotransferase class I and II 31 385 4.7E-82 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 UP17_15240 8fb85d77f4558b5b5c55fad1ccad437a 394 Gene3D G3DSA:3.90.1150.10 25 385 2.4E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_18090 684b6129418530d1113d2c7bf66dc8cf 153 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.5E-68 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 UP17_18090 684b6129418530d1113d2c7bf66dc8cf 153 Pfam PF03477 ATP cone domain 50 136 1.4E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 UP17_18090 684b6129418530d1113d2c7bf66dc8cf 153 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 85.68 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 UP17_17705 258838e5bd8b0addeb6787326d7269b1 330 Gene3D G3DSA:1.25.40.10 3 154 1.3E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_17705 258838e5bd8b0addeb6787326d7269b1 330 SUPERFAMILY SSF48452 5 100 8.54E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_17705 258838e5bd8b0addeb6787326d7269b1 330 SUPERFAMILY SSF116965 73 295 4.84E-9 T 11-10-2018 UP17_06375 83ae2f3416b7ff6b723cbaaa32caadc2 483 Pfam PF13751 Transposase DDE domain 355 478 9.9E-16 T 11-10-2018 IPR025668 Transposase DDE domain UP17_06375 83ae2f3416b7ff6b723cbaaa32caadc2 483 Pfam PF05598 Transposase domain (DUF772) 52 123 1.7E-19 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_21955 83ae2f3416b7ff6b723cbaaa32caadc2 483 Pfam PF13751 Transposase DDE domain 355 478 9.9E-16 T 11-10-2018 IPR025668 Transposase DDE domain UP17_21955 83ae2f3416b7ff6b723cbaaa32caadc2 483 Pfam PF05598 Transposase domain (DUF772) 52 123 1.7E-19 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_08900 83ae2f3416b7ff6b723cbaaa32caadc2 483 Pfam PF13751 Transposase DDE domain 355 478 9.9E-16 T 11-10-2018 IPR025668 Transposase DDE domain UP17_08900 83ae2f3416b7ff6b723cbaaa32caadc2 483 Pfam PF05598 Transposase domain (DUF772) 52 123 1.7E-19 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_08075 b2764ac4049fe84051329892cf18928a 556 Hamap MF_01491 Ribonuclease J [rnj]. 4 556 44.726 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 UP17_08075 b2764ac4049fe84051329892cf18928a 556 Pfam PF00753 Metallo-beta-lactamase superfamily 18 167 2.9E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_08075 b2764ac4049fe84051329892cf18928a 556 Gene3D G3DSA:3.60.15.10 13 443 1.2E-168 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_08075 b2764ac4049fe84051329892cf18928a 556 SMART SM00849 21 226 7.0E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_08075 b2764ac4049fe84051329892cf18928a 556 Gene3D G3DSA:3.10.20.580 450 556 3.9E-38 T 11-10-2018 UP17_08075 b2764ac4049fe84051329892cf18928a 556 SUPERFAMILY SSF56281 9 425 5.24E-86 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_08075 b2764ac4049fe84051329892cf18928a 556 PIRSF PIRSF004803 2 556 3.3E-217 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 UP17_08075 b2764ac4049fe84051329892cf18928a 556 Gene3D G3DSA:3.40.50.10710 208 358 1.2E-168 T 11-10-2018 UP17_08075 b2764ac4049fe84051329892cf18928a 556 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 554 7.9E-203 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 UP17_08075 b2764ac4049fe84051329892cf18928a 556 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 359 404 1.0E-9 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 PRINTS PR01806 Virulence factor MviN signature 37 56 3.5E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 PRINTS PR01806 Virulence factor MviN signature 157 178 3.5E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 PRINTS PR01806 Virulence factor MviN signature 133 157 3.5E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 PRINTS PR01806 Virulence factor MviN signature 354 373 3.5E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 PRINTS PR01806 Virulence factor MviN signature 257 283 3.5E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 PRINTS PR01806 Virulence factor MviN signature 406 423 3.5E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 PIRSF PIRSF002869 3 506 2.0E-101 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 7 500 1.1E-93 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 7 467 16.185 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_23840 439466bcdc6fa9f52e74de0f37b79d1f 507 Pfam PF03023 MviN-like protein 32 468 1.4E-78 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 SMART SM00345 11 70 9.7E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 6.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 6.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 SUPERFAMILY SSF64288 58 237 2.04E-47 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 Pfam PF07702 UTRA domain 93 230 3.3E-35 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 SMART SM00866 92 231 2.4E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 Gene3D G3DSA:3.40.1410.10 74 237 1.8E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 6.5E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 SUPERFAMILY SSF46785 5 79 1.48E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_08275 f9ae42d2e1c323754fd6447d68265773 238 Gene3D G3DSA:1.10.10.10 6 73 1.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10695 6f5d5170310baee4b900ac389efc7943 285 SUPERFAMILY SSF46689 5 78 2.51E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_10695 6f5d5170310baee4b900ac389efc7943 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 77 1.5E-24 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 UP17_10695 6f5d5170310baee4b900ac389efc7943 285 SUPERFAMILY SSF53697 95 279 2.49E-42 T 11-10-2018 UP17_10695 6f5d5170310baee4b900ac389efc7943 285 Gene3D G3DSA:1.10.10.10 1 83 1.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10695 6f5d5170310baee4b900ac389efc7943 285 Pfam PF01380 SIS domain 127 256 3.8E-24 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_10695 6f5d5170310baee4b900ac389efc7943 285 Gene3D G3DSA:3.40.50.10490 95 282 9.1E-50 T 11-10-2018 UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 SUPERFAMILY SSF56281 123 365 6.5E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 SMART SM00849 130 294 1.6E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 SMART SM00450 7 109 4.8E-12 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 SUPERFAMILY SSF52821 2 110 6.42E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 Gene3D G3DSA:3.40.250.10 2 111 2.9E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 Pfam PF00581 Rhodanese-like domain 8 105 5.5E-8 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 Pfam PF00753 Metallo-beta-lactamase superfamily 130 294 1.3E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_09570 4128efa03c4a2a47c19faeb361b26646 375 Gene3D G3DSA:3.60.15.10 118 355 7.1E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_13330 b2e990d9e2f4df72b35b4610c4176c7f 263 Pfam PF00685 Sulfotransferase domain 76 249 1.2E-12 T 11-10-2018 IPR000863 Sulfotransferase domain GO:0008146 UP17_13330 b2e990d9e2f4df72b35b4610c4176c7f 263 SUPERFAMILY SSF52540 12 262 1.02E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13330 b2e990d9e2f4df72b35b4610c4176c7f 263 Gene3D G3DSA:3.40.50.300 2 257 2.0E-33 T 11-10-2018 UP17_22710 5d78405306f421004e4ffa53d5fb0762 789 Pfam PF01804 Penicillin amidase 59 777 9.2E-231 T 11-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 UP17_22710 5d78405306f421004e4ffa53d5fb0762 789 PIRSF PIRSF001227 18 785 2.5E-212 T 11-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 UP17_22710 5d78405306f421004e4ffa53d5fb0762 789 Gene3D G3DSA:1.10.439.10 32 195 3.8E-59 T 11-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 UP17_22710 5d78405306f421004e4ffa53d5fb0762 789 SUPERFAMILY SSF56235 55 778 2.01E-226 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_22710 5d78405306f421004e4ffa53d5fb0762 789 Gene3D G3DSA:2.30.120.10 328 399 3.6E-173 T 11-10-2018 UP17_22710 5d78405306f421004e4ffa53d5fb0762 789 Gene3D G3DSA:3.60.20.10 256 768 3.6E-173 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_22710 5d78405306f421004e4ffa53d5fb0762 789 Gene3D G3DSA:1.10.1400.10 548 679 3.6E-173 T 11-10-2018 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Pfam PF00989 PAS fold 153 227 6.5E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Pfam PF00989 PAS fold 271 367 1.1E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Gene3D G3DSA:3.30.565.10 580 725 2.6E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 146 260 6.4E-11 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 342 3.5E-10 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Gene3D G3DSA:1.10.287.130 499 576 1.7E-17 T 11-10-2018 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Pfam PF13188 PAS domain 389 427 0.0049 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Pfam PF13188 PAS domain 33 71 8.3E-6 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SMART SM00387 619 725 1.6E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 686 704 1.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 710 723 1.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 675 685 1.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 671 1.8E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SUPERFAMILY SSF55874 571 724 6.55E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 622 724 8.9E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SUPERFAMILY SSF55785 141 223 2.26E-13 T 11-10-2018 IPR035965 PAS domain superfamily UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SUPERFAMILY SSF47384 509 575 1.88E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Gene3D G3DSA:3.30.450.20 374 495 7.1E-9 T 11-10-2018 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SUPERFAMILY SSF55785 15 79 9.02E-9 T 11-10-2018 IPR035965 PAS domain superfamily UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SUPERFAMILY SSF55785 253 372 1.4E-16 T 11-10-2018 IPR035965 PAS domain superfamily UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Gene3D G3DSA:3.30.450.20 32 138 6.2E-10 T 11-10-2018 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SUPERFAMILY SSF55785 373 495 6.63E-10 T 11-10-2018 IPR035965 PAS domain superfamily UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SMART SM00091 268 336 6.1E-8 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SMART SM00091 388 455 6.4 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SMART SM00091 148 214 8.5E-9 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SMART SM00091 29 96 3.4E-4 T 11-10-2018 IPR000014 PAS domain UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Gene3D G3DSA:3.30.450.20 267 373 3.8E-16 T 11-10-2018 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Pfam PF00512 His Kinase A (phospho-acceptor) domain 515 575 5.6E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 Gene3D G3DSA:3.30.450.20 145 266 6.7E-12 T 11-10-2018 UP17_06720 de6f5c262f74d5618213b715fea76d0b 725 SMART SM00388 513 577 4.8E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_05025 271c0786f6fa7f80d3a0625ab9562c9e 131 Gene3D G3DSA:3.40.30.10 1 129 1.3E-39 T 11-10-2018 UP17_05025 271c0786f6fa7f80d3a0625ab9562c9e 131 Pfam PF03960 ArsC family 5 113 7.3E-19 T 11-10-2018 IPR006660 Arsenate reductase-like UP17_05025 271c0786f6fa7f80d3a0625ab9562c9e 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 5.0E-31 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR UP17_05025 271c0786f6fa7f80d3a0625ab9562c9e 131 SUPERFAMILY SSF52833 1 125 1.25E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 SMART SM00881 4 100 5.2E-34 T 11-10-2018 IPR003781 CoA-binding GO:0048037 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-38 T 11-10-2018 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-38 T 11-10-2018 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-38 T 11-10-2018 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-38 T 11-10-2018 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 SUPERFAMILY SSF52210 123 287 1.83E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 Pfam PF02629 CoA binding domain 6 99 2.8E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.835 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 PIRSF PIRSF001553 1 291 2.5E-135 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 1.9E-149 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 SUPERFAMILY SSF51735 1 122 9.57E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 Pfam PF00549 CoA-ligase 151 262 1.3E-16 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 Gene3D G3DSA:3.40.50.261 124 289 9.8E-72 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 Gene3D G3DSA:3.40.50.720 1 123 2.4E-52 T 11-10-2018 UP17_07715 80a69f37e99b0ba19cefa461ea5d544b 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site UP17_16110 7d4e18c0f14c9402319529c2e84d091a 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 123 2.1E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_16110 7d4e18c0f14c9402319529c2e84d091a 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 124 137 2.1E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_16110 7d4e18c0f14c9402319529c2e84d091a 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 92 105 2.1E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_16110 7d4e18c0f14c9402319529c2e84d091a 165 SUPERFAMILY SSF51230 86 162 2.22E-22 T 11-10-2018 IPR011053 Single hybrid motif UP17_16110 7d4e18c0f14c9402319529c2e84d091a 165 Pfam PF00364 Biotin-requiring enzyme 89 160 3.3E-22 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_16110 7d4e18c0f14c9402319529c2e84d091a 165 Gene3D G3DSA:2.40.50.100 85 162 1.7E-28 T 11-10-2018 UP17_16110 7d4e18c0f14c9402319529c2e84d091a 165 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 163 3.5E-53 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 SUPERFAMILY SSF51905 2 416 1.66E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.1E-9 T 11-10-2018 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 5.1E-9 T 11-10-2018 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 Gene3D G3DSA:1.10.8.260 279 343 9.8E-122 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 Gene3D G3DSA:3.50.50.60 6 409 9.8E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 Gene3D G3DSA:2.40.30.10 192 360 9.8E-122 T 11-10-2018 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 Pfam PF03486 HI0933-like protein 3 413 1.9E-152 T 11-10-2018 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 SUPERFAMILY SSF160996 193 361 8.24E-47 T 11-10-2018 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 9.9E-6 T 11-10-2018 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 9.9E-6 T 11-10-2018 UP17_18780 a56e8b5a5cb3a0d4fdf7907281841d00 421 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 413 1.3E-143 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like UP17_18270 663832bc3fe1f1a3d3b0bb6b7f2932fb 148 Pfam PF00582 Universal stress protein family 3 142 1.7E-35 T 11-10-2018 IPR006016 UspA UP17_18270 663832bc3fe1f1a3d3b0bb6b7f2932fb 148 PRINTS PR01438 Universal stress protein signature 3 21 1.2E-19 T 11-10-2018 IPR006015 Universal stress protein A UP17_18270 663832bc3fe1f1a3d3b0bb6b7f2932fb 148 PRINTS PR01438 Universal stress protein signature 120 142 1.2E-19 T 11-10-2018 IPR006015 Universal stress protein A UP17_18270 663832bc3fe1f1a3d3b0bb6b7f2932fb 148 PRINTS PR01438 Universal stress protein signature 102 114 1.2E-19 T 11-10-2018 IPR006015 Universal stress protein A UP17_18270 663832bc3fe1f1a3d3b0bb6b7f2932fb 148 SUPERFAMILY SSF52402 3 143 4.02E-37 T 11-10-2018 UP17_18270 663832bc3fe1f1a3d3b0bb6b7f2932fb 148 PIRSF PIRSF006276 1 145 3.4E-23 T 11-10-2018 IPR006015 Universal stress protein A UP17_18270 663832bc3fe1f1a3d3b0bb6b7f2932fb 148 Gene3D G3DSA:3.40.50.620 5 142 8.4E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_19000 2447c2a922eb204d25131455497db683 94 SUPERFAMILY SSF89447 1 52 2.75E-16 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily UP17_19000 2447c2a922eb204d25131455497db683 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 4.2E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_19000 2447c2a922eb204d25131455497db683 94 Gene3D G3DSA:2.10.260.10 1 53 8.6E-26 T 11-10-2018 UP17_19000 2447c2a922eb204d25131455497db683 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 3.1E-9 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_19000 2447c2a922eb204d25131455497db683 94 SMART SM00966 8 51 6.4E-9 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_21640 2c8c92eb693b9ded0cbd0ad60b855639 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 138 3.8E-27 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_21640 2c8c92eb693b9ded0cbd0ad60b855639 168 Gene3D G3DSA:1.10.10.10 1 145 9.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21640 2c8c92eb693b9ded0cbd0ad60b855639 168 SUPERFAMILY SSF46785 2 139 8.03E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_21640 2c8c92eb693b9ded0cbd0ad60b855639 168 Pfam PF02082 Transcriptional regulator 2 82 3.8E-21 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_19655 d9feb2fb633e337624e38a123680c391 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_19655 d9feb2fb633e337624e38a123680c391 455 Gene3D G3DSA:3.40.640.10 50 327 2.7E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_19655 d9feb2fb633e337624e38a123680c391 455 PIRSF PIRSF000521 10 439 7.6E-44 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_19655 d9feb2fb633e337624e38a123680c391 455 Gene3D G3DSA:3.90.1150.10 17 436 2.7E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_19655 d9feb2fb633e337624e38a123680c391 455 SUPERFAMILY SSF53383 10 439 2.16E-127 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_19655 d9feb2fb633e337624e38a123680c391 455 Pfam PF00202 Aminotransferase class-III 17 434 4.7E-110 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_09925 668aee98a9d86c90c8821a9977474042 722 Gene3D G3DSA:2.20.25.90 19 74 2.3E-12 T 11-10-2018 UP17_09925 668aee98a9d86c90c8821a9977474042 722 Pfam PF01568 Molydopterin dinucleotide binding domain 603 710 8.0E-28 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 UP17_09925 668aee98a9d86c90c8821a9977474042 722 Gene3D G3DSA:3.40.50.740 94 559 6.7E-165 T 11-10-2018 UP17_09925 668aee98a9d86c90c8821a9977474042 722 SMART SM00926 18 74 3.0E-12 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_09925 668aee98a9d86c90c8821a9977474042 722 Gene3D G3DSA:3.40.228.10 162 362 6.7E-165 T 11-10-2018 UP17_09925 668aee98a9d86c90c8821a9977474042 722 Gene3D G3DSA:2.40.40.20 593 716 1.5E-39 T 11-10-2018 UP17_09925 668aee98a9d86c90c8821a9977474042 722 SUPERFAMILY SSF50692 569 715 7.23E-44 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily UP17_09925 668aee98a9d86c90c8821a9977474042 722 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 20 74 2.2E-13 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_09925 668aee98a9d86c90c8821a9977474042 722 SUPERFAMILY SSF53706 16 605 2.75E-177 T 11-10-2018 UP17_09925 668aee98a9d86c90c8821a9977474042 722 Pfam PF00384 Molybdopterin oxidoreductase 77 510 7.8E-87 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_19170 8fd80a270840b9712d7d2736e2c8388a 430 Pfam PF03600 Citrate transporter 14 375 8.4E-48 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 UP17_19170 8fd80a270840b9712d7d2736e2c8388a 430 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 1.1E-191 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 UP17_09140 562bf5636522d35f291c19c44c179ef6 333 Gene3D G3DSA:3.40.800.10 6 314 7.3E-95 T 11-10-2018 UP17_09140 562bf5636522d35f291c19c44c179ef6 333 Pfam PF00491 Arginase family 33 306 6.1E-76 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_09140 562bf5636522d35f291c19c44c179ef6 333 ProSitePatterns PS01053 Arginase family signature. 237 258 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 UP17_09140 562bf5636522d35f291c19c44c179ef6 333 PIRSF PIRSF036979 15 314 4.4E-72 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_09140 562bf5636522d35f291c19c44c179ef6 333 TIGRFAM TIGR01230 agmatinase: agmatinase 29 308 8.2E-56 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 UP17_09140 562bf5636522d35f291c19c44c179ef6 333 SUPERFAMILY SSF52768 10 312 1.17E-82 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_11375 f9dd3dbff484b912139d79aa087c22b7 140 Pfam PF13160 Protein of unknown function (DUF3995) 15 131 2.2E-34 T 11-10-2018 IPR025058 Protein of unknown function DUF3995 UP17_16265 ab5653ed29745898c69828d0005dd07e 99 PRINTS PR00813 Bacterial general secretion pathway protein G signature 6 31 5.5E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 UP17_16265 ab5653ed29745898c69828d0005dd07e 99 PRINTS PR00813 Bacterial general secretion pathway protein G signature 42 60 5.5E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 UP17_16265 ab5653ed29745898c69828d0005dd07e 99 Gene3D G3DSA:3.30.700.10 7 66 7.8E-11 T 11-10-2018 UP17_16265 ab5653ed29745898c69828d0005dd07e 99 PIRSF PIRSF029928 1 98 8.8E-36 T 11-10-2018 IPR016940 ComG operon protein C GO:0030420 UP17_16265 ab5653ed29745898c69828d0005dd07e 99 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site UP17_16265 ab5653ed29745898c69828d0005dd07e 99 SUPERFAMILY SSF54523 7 94 1.73E-14 T 11-10-2018 UP17_16265 ab5653ed29745898c69828d0005dd07e 99 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 3.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site UP17_16265 ab5653ed29745898c69828d0005dd07e 99 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 5.4E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 Gene3D G3DSA:3.40.50.1980 18 197 8.6E-53 T 11-10-2018 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 Gene3D G3DSA:3.40.50.1980 199 311 4.9E-38 T 11-10-2018 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00690 Adhesin family signature 60 73 2.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00690 Adhesin family signature 73 90 2.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00690 Adhesin family signature 196 217 2.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 309 2.0E-67 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00691 Adhesin B signature 196 213 8.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00691 Adhesin B signature 73 92 8.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00691 Adhesin B signature 29 50 8.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00691 Adhesin B signature 54 72 8.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 PRINTS PR00691 Adhesin B signature 289 307 8.8E-11 T 11-10-2018 IPR006129 Adhesin B GO:0007155 UP17_22150 e66e1e4207e870e18e0c9eff39c7946b 311 SUPERFAMILY SSF53807 10 311 2.94E-77 T 11-10-2018 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 Gene3D G3DSA:3.40.309.10 224 372 6.2E-157 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 1.2E-161 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 PIRSF PIRSF000151 1 415 6.8E-172 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 39.607 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 Pfam PF00171 Aldehyde dehydrogenase family 4 270 1.4E-11 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 SUPERFAMILY SSF53720 2 414 1.83E-104 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 Gene3D G3DSA:3.40.605.10 16 409 6.2E-157 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_14990 f74e671700468f18162bb4edfefb3a0f 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 SUPERFAMILY SSF103473 12 516 1.7E-72 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 Gene3D G3DSA:1.20.1720.10 20 227 1.8E-41 T 11-10-2018 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 509 7.1E-159 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 3.3E-11 T 11-10-2018 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 3.3E-11 T 11-10-2018 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 362 382 3.3E-11 T 11-10-2018 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 308 332 3.3E-11 T 11-10-2018 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 3.3E-11 T 11-10-2018 UP17_03840 6391ed5fcf06d40ea3caa34fafb894fd 539 Pfam PF07690 Major Facilitator Superfamily 24 415 2.2E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_09550 7e4d943c5051dbeef35a52520aded5b1 122 Gene3D G3DSA:3.40.250.10 27 122 2.7E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_09550 7e4d943c5051dbeef35a52520aded5b1 122 SUPERFAMILY SSF52821 5 122 2.49E-32 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_09550 7e4d943c5051dbeef35a52520aded5b1 122 Pfam PF00581 Rhodanese-like domain 32 121 1.1E-16 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_09550 7e4d943c5051dbeef35a52520aded5b1 122 SMART SM00450 31 122 3.0E-21 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_06585 8dbefb8268993007237a5882daf5e18c 299 Pfam PF00005 ABC transporter 18 154 3.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_06585 8dbefb8268993007237a5882daf5e18c 299 SUPERFAMILY SSF52540 2 221 9.29E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_06585 8dbefb8268993007237a5882daf5e18c 299 SMART SM00382 26 204 7.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_06585 8dbefb8268993007237a5882daf5e18c 299 Gene3D G3DSA:3.40.50.300 1 229 2.6E-47 T 11-10-2018 UP17_19605 533ac8c861dde263b15fdfbbe95520fd 208 Pfam PF01810 LysE type translocator 12 201 1.6E-38 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_24995 b0788d95eab1946777baeca8cd8f1633 233 Pfam PF04474 Protein of unknown function (DUF554) 4 227 2.2E-71 T 11-10-2018 IPR007563 Protein of unknown function DUF554 UP17_00420 1c822597acdcd4566fa94984eedccbe0 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 305 2.2E-143 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 UP17_00420 1c822597acdcd4566fa94984eedccbe0 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 UP17_00420 1c822597acdcd4566fa94984eedccbe0 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 293 1.1E-71 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_00420 1c822597acdcd4566fa94984eedccbe0 308 Gene3D G3DSA:3.40.50.1100 46 144 1.1E-124 T 11-10-2018 UP17_00420 1c822597acdcd4566fa94984eedccbe0 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 305 1.9E-135 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 UP17_00420 1c822597acdcd4566fa94984eedccbe0 308 Gene3D G3DSA:3.40.50.1100 7 301 1.1E-124 T 11-10-2018 UP17_00420 1c822597acdcd4566fa94984eedccbe0 308 SUPERFAMILY SSF53686 3 305 6.94E-105 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 Gene3D G3DSA:1.10.10.10 2 83 8.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 168 4.0E-59 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 Hamap MF_01804 Segregation and condensation protein B [scpB]. 4 184 35.544 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 Gene3D G3DSA:1.10.10.10 84 179 1.5E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 PIRSF PIRSF019345 1 191 4.5E-58 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 191 2.1E-59 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 SUPERFAMILY SSF46785 3 81 1.14E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_15685 6b618fb08192829b4ca54878ddd65e0f 193 SUPERFAMILY SSF46785 86 159 2.18E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_06075 c1b367b374482f5bca07615f187e793b 257 SUPERFAMILY SSF51735 6 255 9.11E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06075 c1b367b374482f5bca07615f187e793b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06075 c1b367b374482f5bca07615f187e793b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06075 c1b367b374482f5bca07615f187e793b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06075 c1b367b374482f5bca07615f187e793b 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 4.5E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06075 c1b367b374482f5bca07615f187e793b 257 PIRSF PIRSF000094 2 257 4.7E-105 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_06075 c1b367b374482f5bca07615f187e793b 257 Gene3D G3DSA:3.40.50.720 1 256 1.7E-60 T 11-10-2018 UP17_06075 c1b367b374482f5bca07615f187e793b 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 3.2E-87 T 11-10-2018 UP17_25435 c474c823427c98f136eaca3b8f36fb2d 129 Gene3D G3DSA:1.20.120.1870 1 128 2.0E-32 T 11-10-2018 UP17_25435 c474c823427c98f136eaca3b8f36fb2d 129 Pfam PF02661 Fic/DOC family 3 87 1.1E-10 T 11-10-2018 IPR003812 Fido domain UP17_25435 c474c823427c98f136eaca3b8f36fb2d 129 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 4 120 4.4E-20 T 11-10-2018 IPR006440 Death on curing protein GO:0016301 UP17_00855 b5cd7e90cc78ab3a7b453023d015a18c 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 UP17_00855 b5cd7e90cc78ab3a7b453023d015a18c 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.252 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid UP17_00855 b5cd7e90cc78ab3a7b453023d015a18c 130 Gene3D G3DSA:3.30.230.10 1 130 1.4E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_00855 b5cd7e90cc78ab3a7b453023d015a18c 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 9.6E-48 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 UP17_00855 b5cd7e90cc78ab3a7b453023d015a18c 130 SUPERFAMILY SSF54211 5 130 9.1E-51 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_01695 7c447482319c2e284a491a35fefc4b9d 434 Gene3D G3DSA:1.20.1250.20 5 205 7.8E-22 T 11-10-2018 UP17_01695 7c447482319c2e284a491a35fefc4b9d 434 SUPERFAMILY SSF103473 8 423 3.53E-49 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_01695 7c447482319c2e284a491a35fefc4b9d 434 Gene3D G3DSA:1.20.1250.20 221 427 1.1E-19 T 11-10-2018 UP17_01695 7c447482319c2e284a491a35fefc4b9d 434 Pfam PF07690 Major Facilitator Superfamily 38 335 3.2E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_17645 a83e47439458a8fe01ef7b1f4593757e 429 SUPERFAMILY SSF53383 4 426 2.21E-131 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_17645 a83e47439458a8fe01ef7b1f4593757e 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 1.1E-200 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 UP17_17645 a83e47439458a8fe01ef7b1f4593757e 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_17645 a83e47439458a8fe01ef7b1f4593757e 429 Gene3D G3DSA:3.40.640.10 72 319 1.1E-183 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_17645 a83e47439458a8fe01ef7b1f4593757e 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 104.891 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 UP17_17645 a83e47439458a8fe01ef7b1f4593757e 429 Gene3D G3DSA:3.90.1150.10 10 421 1.1E-183 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_17645 a83e47439458a8fe01ef7b1f4593757e 429 Pfam PF00202 Aminotransferase class-III 34 397 5.3E-75 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_19820 8d7763a39a641042d75f89bc7bddfbb1 113 SUPERFAMILY SSF46458 3 111 2.22E-33 T 11-10-2018 IPR009050 Globin-like superfamily UP17_19820 8d7763a39a641042d75f89bc7bddfbb1 113 Pfam PF01152 Bacterial-like globin 4 112 1.5E-25 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 UP17_19820 8d7763a39a641042d75f89bc7bddfbb1 113 PIRSF PIRSF002030 1 113 3.3E-42 T 11-10-2018 IPR016339 Truncated hemoglobin, group 1 UP17_19820 8d7763a39a641042d75f89bc7bddfbb1 113 Gene3D G3DSA:1.10.490.10 1 113 2.8E-38 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 UP17_06665 1331caa950e17ad608e2347e30cad8ac 65 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 60 9.8E-21 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 UP17_06665 1331caa950e17ad608e2347e30cad8ac 65 Gene3D G3DSA:1.10.8.910 6 65 3.4E-29 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily UP17_06665 1331caa950e17ad608e2347e30cad8ac 65 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 21 30 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_06665 1331caa950e17ad608e2347e30cad8ac 65 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 39 53 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_17865 ef7781f4374e7cbdaf8abddf9e03f00d 202 SUPERFAMILY SSF81343 4 201 1.8E-62 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17865 ef7781f4374e7cbdaf8abddf9e03f00d 202 PIRSF PIRSF000170 1 202 3.6E-97 T 11-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute UP17_17865 ef7781f4374e7cbdaf8abddf9e03f00d 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 88 191 2.7E-11 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17865 ef7781f4374e7cbdaf8abddf9e03f00d 202 Gene3D G3DSA:1.20.1300.10 2 202 1.8E-48 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17865 ef7781f4374e7cbdaf8abddf9e03f00d 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 5 202 9.8E-57 T 11-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 Pfam PF13424 Tetratricopeptide repeat 139 198 2.1E-8 T 11-10-2018 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SUPERFAMILY SSF48452 30 198 1.18E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SUPERFAMILY SSF48452 204 409 2.73E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 Gene3D G3DSA:1.25.40.10 6 200 9.0E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 Gene3D G3DSA:1.25.40.10 201 420 3.5E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 Pfam PF14559 Tetratricopeptide repeat 48 96 1.3E-5 T 11-10-2018 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SMART SM00028 237 270 5.7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SMART SM00028 170 203 17.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SMART SM00028 271 304 61.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SMART SM00028 32 65 200.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SMART SM00028 134 167 15.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_15355 e4cb868bd00b72a89125eeed7c2ab033 423 SMART SM00028 339 372 410.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 Pfam PF01642 Methylmalonyl-CoA mutase 41 553 2.1E-238 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 41 559 1.1E-270 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 Gene3D G3DSA:3.40.50.280 559 722 2.4E-53 T 11-10-2018 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 SUPERFAMILY SSF51703 13 555 6.67E-223 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 592 721 1.4E-58 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 SUPERFAMILY SSF52242 559 722 6.28E-57 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 Gene3D G3DSA:3.20.20.240 40 555 5.4E-242 T 11-10-2018 UP17_10245 1b1d4df4ea420893ee4c8772b8b27171 726 Pfam PF02310 B12 binding domain 595 705 4.4E-13 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_22180 76bdbf804b61eef6b1a9768249c6386f 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 UP17_22180 76bdbf804b61eef6b1a9768249c6386f 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 3.0E-129 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 UP17_22180 76bdbf804b61eef6b1a9768249c6386f 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 54.903 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 UP17_22180 76bdbf804b61eef6b1a9768249c6386f 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 7.8E-89 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_22180 76bdbf804b61eef6b1a9768249c6386f 272 Gene3D G3DSA:3.90.226.10 1 209 8.0E-76 T 11-10-2018 UP17_22180 76bdbf804b61eef6b1a9768249c6386f 272 Gene3D G3DSA:1.10.12.10 210 260 1.7E-28 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal UP17_22180 76bdbf804b61eef6b1a9768249c6386f 272 SUPERFAMILY SSF52096 4 267 1.85E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_19055 1b9f6f6719f92adbed2aa57cb051894a 407 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 8 394 1.2E-98 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_19055 1b9f6f6719f92adbed2aa57cb051894a 407 Gene3D G3DSA:3.30.300.210 244 396 7.2E-39 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_19055 1b9f6f6719f92adbed2aa57cb051894a 407 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 228 392 2.2E-41 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_01380 1b26abeab90391f7e464209a24b758e9 93 SUPERFAMILY SSF47598 8 47 6.67E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 UP17_01380 1b26abeab90391f7e464209a24b758e9 93 Gene3D G3DSA:1.10.1220.10 1 93 1.9E-38 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 UP17_16510 58dabefa2f1b53207db912c8e8203562 275 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 29 275 2.8E-126 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 UP17_16510 58dabefa2f1b53207db912c8e8203562 275 SMART SM00382 53 262 4.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_16510 58dabefa2f1b53207db912c8e8203562 275 Gene3D G3DSA:3.40.50.300 30 271 1.6E-62 T 11-10-2018 UP17_16510 58dabefa2f1b53207db912c8e8203562 275 SUPERFAMILY SSF52540 28 270 1.82E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16510 58dabefa2f1b53207db912c8e8203562 275 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_16510 58dabefa2f1b53207db912c8e8203562 275 Pfam PF00005 ABC transporter 44 200 5.9E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Gene3D G3DSA:3.10.196.10 871 1148 7.2E-62 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Gene3D G3DSA:3.20.20.330 1 320 1.1E-112 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Pfam PF00809 Pterin binding enzyme 340 573 4.1E-42 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Gene3D G3DSA:3.20.20.20 321 616 4.2E-100 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Gene3D G3DSA:3.40.50.280 710 860 9.5E-45 T 11-10-2018 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 PIRSF PIRSF000381 1 1149 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 SUPERFAMILY SSF52242 709 842 3.27E-38 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 TIGRFAM TIGR02082 metH: methionine synthase 11 1147 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 SUPERFAMILY SSF47644 625 706 9.68E-24 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Gene3D G3DSA:1.10.1240.10 617 704 1.9E-26 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 SMART SM01018 624 707 3.9E-36 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 SUPERFAMILY SSF51717 337 600 1.7E-78 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Pfam PF02574 Homocysteine S-methyltransferase 15 304 2.5E-77 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Gene3D G3DSA:1.10.288.10 898 956 7.2E-62 T 11-10-2018 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 SUPERFAMILY SSF56507 875 1148 9.16E-83 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Pfam PF02607 B12 binding domain 627 700 7.2E-24 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 900 1148 1.1E-51 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 SUPERFAMILY SSF82282 5 379 3.92E-112 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 UP17_14005 ff09a4ab41ad4da23550821c0ed2fca3 1149 Pfam PF02310 B12 binding domain 714 803 2.4E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_10790 cf411f904deb7752a67ceaca702af89b 345 Gene3D G3DSA:3.40.50.720 150 282 3.2E-74 T 11-10-2018 UP17_10790 cf411f904deb7752a67ceaca702af89b 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 UP17_10790 cf411f904deb7752a67ceaca702af89b 345 SUPERFAMILY SSF50129 1 172 1.0E-49 T 11-10-2018 IPR011032 GroES-like superfamily UP17_10790 cf411f904deb7752a67ceaca702af89b 345 SUPERFAMILY SSF51735 139 286 8.2E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10790 cf411f904deb7752a67ceaca702af89b 345 SMART SM00829 7 311 0.0094 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_10790 cf411f904deb7752a67ceaca702af89b 345 Pfam PF00107 Zinc-binding dehydrogenase 173 293 6.9E-9 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_10790 cf411f904deb7752a67ceaca702af89b 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 133 3.4E-30 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_10790 cf411f904deb7752a67ceaca702af89b 345 Gene3D G3DSA:3.90.180.10 9 318 3.2E-74 T 11-10-2018 UP17_13775 04cd0e1edd7fd4d82a1410c0ea1cc12c 127 Gene3D G3DSA:3.10.180.10 10 126 6.4E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_13775 04cd0e1edd7fd4d82a1410c0ea1cc12c 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 123 4.2E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_13775 04cd0e1edd7fd4d82a1410c0ea1cc12c 127 SUPERFAMILY SSF54593 10 125 1.61E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_17520 8f69833ec3900def6dc1fbf5f69ec438 110 Pfam PF04327 Cysteine protease Prp 1 105 5.6E-28 T 11-10-2018 IPR007422 Cysteine protease Prp UP17_17520 8f69833ec3900def6dc1fbf5f69ec438 110 SUPERFAMILY SSF118010 1 108 1.09E-31 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily UP17_17520 8f69833ec3900def6dc1fbf5f69ec438 110 Gene3D G3DSA:3.30.70.1490 1 110 1.3E-34 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily UP17_09590 a21f120700b1b85ecbaf1982f3ea9e88 87 Gene3D G3DSA:1.10.1660.10 6 87 3.6E-16 T 11-10-2018 UP17_09590 a21f120700b1b85ecbaf1982f3ea9e88 87 SMART SM00422 16 86 1.4E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_09590 a21f120700b1b85ecbaf1982f3ea9e88 87 SUPERFAMILY SSF46955 15 84 9.52E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_09590 a21f120700b1b85ecbaf1982f3ea9e88 87 Pfam PF13411 MerR HTH family regulatory protein 17 83 5.1E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 SMART SM00382 160 303 2.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 SUPERFAMILY SSF52172 4 183 8.97E-32 T 11-10-2018 IPR011006 CheY-like superfamily UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 SMART SM00448 2 114 1.4E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 Pfam PF00072 Response regulator receiver domain 5 112 2.0E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 SUPERFAMILY SSF52540 140 378 1.33E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 Gene3D G3DSA:3.40.50.300 130 311 1.4E-61 T 11-10-2018 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 Pfam PF02954 Bacterial regulatory protein, Fis family 437 467 1.6E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 Gene3D G3DSA:1.10.8.60 312 384 7.7E-20 T 11-10-2018 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 Gene3D G3DSA:1.10.10.60 397 474 9.1E-7 T 11-10-2018 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 Pfam PF00158 Sigma-54 interaction domain 140 306 3.8E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_02215 5bab7fdafac18122eb741650bdcd8995 475 Gene3D G3DSA:3.40.50.2300 2 129 2.8E-29 T 11-10-2018 UP17_21880 40c09049e082e00066d9129ce4286926 454 Gene3D G3DSA:2.30.170.30 1 54 1.4E-24 T 11-10-2018 UP17_21880 40c09049e082e00066d9129ce4286926 454 Gene3D G3DSA:1.10.220.70 55 141 3.8E-32 T 11-10-2018 UP17_21880 40c09049e082e00066d9129ce4286926 454 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 9.6E-207 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 UP17_21880 40c09049e082e00066d9129ce4286926 454 PIRSF PIRSF018788 1 454 2.1E-220 T 11-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 UP17_21880 40c09049e082e00066d9129ce4286926 454 Gene3D G3DSA:3.20.20.70 142 454 1.1E-147 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_08770 4d8063e213d79744566860cad67c1885 104 SUPERFAMILY SSF158560 2 103 5.49E-27 T 11-10-2018 UP17_08770 4d8063e213d79744566860cad67c1885 104 Pfam PF06304 Protein of unknown function (DUF1048) 4 103 1.7E-33 T 11-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 UP17_08770 4d8063e213d79744566860cad67c1885 104 Gene3D G3DSA:1.10.1900.10 1 104 3.8E-35 T 11-10-2018 UP17_18055 a591367f1425658400ee40c5d9497c84 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 9.9E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UP17_18055 a591367f1425658400ee40c5d9497c84 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.949 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UP17_18055 a591367f1425658400ee40c5d9497c84 66 SUPERFAMILY SSF143034 2 62 1.03E-21 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18055 a591367f1425658400ee40c5d9497c84 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UP17_18055 a591367f1425658400ee40c5d9497c84 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UP17_18055 a591367f1425658400ee40c5d9497c84 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 UP17_18055 a591367f1425658400ee40c5d9497c84 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_18055 a591367f1425658400ee40c5d9497c84 66 Gene3D G3DSA:2.40.50.530 1 63 1.9E-21 T 11-10-2018 UP17_18055 a591367f1425658400ee40c5d9497c84 66 Pfam PF01632 Ribosomal protein L35 2 62 3.9E-25 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 SUPERFAMILY SSF53774 2 329 3.93E-96 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.5E-14 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 2.5E-14 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 2.5E-14 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 Gene3D G3DSA:3.40.50.1170 1 200 1.9E-65 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 PIRSF PIRSF001220 1 327 7.9E-89 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 PIRSF PIRSF500176 1 325 1.8E-95 T 11-10-2018 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 Pfam PF00710 Asparaginase, N-terminal 3 186 7.6E-62 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 328 6.3E-126 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 Gene3D G3DSA:3.40.50.40 201 331 9.3E-36 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 UP17_08990 afb0c5afd00296b83652fb8f7a7e5b81 331 SMART SM00870 3 316 8.2E-105 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_03090 0195c018912dbb95210965b2e22d6ba9 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.3E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03090 0195c018912dbb95210965b2e22d6ba9 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.3E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03090 0195c018912dbb95210965b2e22d6ba9 103 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 1.3E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03090 0195c018912dbb95210965b2e22d6ba9 103 SUPERFAMILY SSF46785 11 95 3.56E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03090 0195c018912dbb95210965b2e22d6ba9 103 Pfam PF01022 Bacterial regulatory protein, arsR family 23 69 1.9E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03090 0195c018912dbb95210965b2e22d6ba9 103 Gene3D G3DSA:1.10.10.10 4 101 1.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03090 0195c018912dbb95210965b2e22d6ba9 103 SMART SM00418 16 92 3.2E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_08410 f6572d352e99b35a583e07c01ef447a5 189 Gene3D G3DSA:3.30.460.40 3 164 7.9E-12 T 11-10-2018 UP17_08410 f6572d352e99b35a583e07c01ef447a5 189 Pfam PF10706 Aminoglycoside-2''-adenylyltransferase 7 49 3.1E-5 T 11-10-2018 IPR019646 Aminoglycoside-2''-adenylyltransferase UP17_16925 0813f539a7ad4d046b69d94bec5b1e0b 231 Pfam PF01048 Phosphorylase superfamily 2 227 8.0E-50 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UP17_16925 0813f539a7ad4d046b69d94bec5b1e0b 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.402 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_16925 0813f539a7ad4d046b69d94bec5b1e0b 231 SUPERFAMILY SSF53167 1 229 9.95E-72 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 UP17_16925 0813f539a7ad4d046b69d94bec5b1e0b 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 230 5.5E-112 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 UP17_16925 0813f539a7ad4d046b69d94bec5b1e0b 231 Gene3D G3DSA:3.40.50.1580 1 231 3.5E-69 T 11-10-2018 UP17_22550 5577d9b34c5baf51f81f718ff689b130 193 Gene3D G3DSA:1.10.1740.10 3 91 1.2E-17 T 11-10-2018 UP17_22550 5577d9b34c5baf51f81f718ff689b130 193 SUPERFAMILY SSF88659 115 177 2.99E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_22550 5577d9b34c5baf51f81f718ff689b130 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 178 2.3E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_22550 5577d9b34c5baf51f81f718ff689b130 193 Pfam PF08281 Sigma-70, region 4 124 176 2.7E-15 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_22550 5577d9b34c5baf51f81f718ff689b130 193 SUPERFAMILY SSF88946 2 100 5.97E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_22550 5577d9b34c5baf51f81f718ff689b130 193 Gene3D G3DSA:1.10.10.10 122 184 1.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_22550 5577d9b34c5baf51f81f718ff689b130 193 Pfam PF04542 Sigma-70 region 2 25 91 1.5E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 SMART SM00382 52 183 1.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 236 2.4E-117 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 332 173.366 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 SUPERFAMILY SSF46785 257 331 6.26E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 2.2E-34 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 Gene3D G3DSA:1.10.10.10 258 332 3.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 332 2.0E-36 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 Gene3D G3DSA:3.40.50.300 19 182 4.6E-40 T 11-10-2018 UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 SUPERFAMILY SSF52540 21 255 1.83E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 Gene3D G3DSA:1.10.8.60 183 257 4.6E-31 T 11-10-2018 UP17_17440 b4a256ff99f2e5f10db8824aaaac064c 332 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 328 3.1E-147 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 UP17_19140 1b6863e905f3c4d3b201c84c2c24b224 281 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 124 3.2E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_19140 1b6863e905f3c4d3b201c84c2c24b224 281 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 169 278 6.2E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_19140 1b6863e905f3c4d3b201c84c2c24b224 281 Gene3D G3DSA:3.10.180.10 9 134 4.5E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_19140 1b6863e905f3c4d3b201c84c2c24b224 281 SUPERFAMILY SSF54593 165 280 1.88E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_19140 1b6863e905f3c4d3b201c84c2c24b224 281 ProSitePatterns PS00934 Glyoxalase I signature 1. 171 192 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 UP17_19140 1b6863e905f3c4d3b201c84c2c24b224 281 Gene3D G3DSA:3.10.180.10 167 281 1.3E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_19140 1b6863e905f3c4d3b201c84c2c24b224 281 SUPERFAMILY SSF54593 6 160 3.62E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_16725 da640e8d7d20167a1de3c877687b0ccd 441 Pfam PF01957 NfeD-like C-terminal, partner-binding 289 436 4.8E-15 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain UP17_16725 da640e8d7d20167a1de3c877687b0ccd 441 SUPERFAMILY SSF52096 33 194 1.7E-22 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_16725 da640e8d7d20167a1de3c877687b0ccd 441 Gene3D G3DSA:3.90.226.10 24 236 5.2E-47 T 11-10-2018 UP17_16725 da640e8d7d20167a1de3c877687b0ccd 441 Pfam PF01972 Serine dehydrogenase proteinase 52 125 8.4E-9 T 11-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 UP17_16725 da640e8d7d20167a1de3c877687b0ccd 441 Gene3D G3DSA:2.40.50.140 377 440 6.7E-6 T 11-10-2018 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 Hamap MF_00335 Ribonuclease Y [rny]. 4 519 26.013 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 SUPERFAMILY SSF109604 315 466 6.73E-30 T 11-10-2018 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 Pfam PF12072 Domain of unknown function (DUF3552) 5 204 7.4E-79 T 11-10-2018 IPR022711 Ribonuclease Y, N-terminal UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 TIGRFAM TIGR00277 HDIG: HDIG domain 331 408 2.2E-25 T 11-10-2018 IPR006675 HDIG domain UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 519 5.2E-247 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 Pfam PF00013 KH domain 212 269 2.4E-6 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 SMART SM00471 331 437 3.4E-14 T 11-10-2018 IPR003607 HD/PDEase domain UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 Gene3D G3DSA:1.10.3210.10 317 471 8.2E-19 T 11-10-2018 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 SUPERFAMILY SSF54791 207 303 1.66E-16 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 Gene3D G3DSA:3.30.1370.10 207 309 5.4E-9 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 Pfam PF01966 HD domain 336 427 1.0E-18 T 11-10-2018 IPR006674 HD domain UP17_08175 e1c86589c6b43dd55d12d491a6e4ead6 519 SMART SM00322 207 274 1.2E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 UP17_09775 4bf700487ea7ca7a9e57c306541c69ee 146 Gene3D G3DSA:3.40.630.30 2 145 2.7E-38 T 11-10-2018 UP17_09775 4bf700487ea7ca7a9e57c306541c69ee 146 Pfam PF13673 Acetyltransferase (GNAT) domain 43 143 2.1E-17 T 11-10-2018 IPR000182 GNAT domain UP17_09775 4bf700487ea7ca7a9e57c306541c69ee 146 SUPERFAMILY SSF55729 5 143 8.48E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 Gene3D G3DSA:3.30.70.1560 126 199 4.9E-54 T 11-10-2018 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 Gene3D G3DSA:3.30.70.580 62 221 4.9E-54 T 11-10-2018 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 Gene3D G3DSA:3.10.290.10 1 54 3.2E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 Pfam PF00849 RNA pseudouridylate synthase 61 187 4.0E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 SUPERFAMILY SSF55120 60 221 6.0E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 SUPERFAMILY SSF55174 1 55 5.21E-13 T 11-10-2018 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 218 3.6E-48 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 SMART SM00363 1 59 7.4E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_02330 cfb8d98fb99c165f3bfe79a9bbe4e556 235 Pfam PF01479 S4 domain 2 46 2.6E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18800 7fa4e7ffeca8be938e13207844e56060 61 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 2.0E-14 T 11-10-2018 IPR020296 Sporulation protein Cse60 UP17_18800 7fa4e7ffeca8be938e13207844e56060 61 Pfam PF10957 Sporulation protein Cse60 2 60 1.8E-31 T 11-10-2018 IPR020296 Sporulation protein Cse60 UP17_15190 74706789952d4f254091c1a8d4d10f73 127 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 126 3.7E-39 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 UP17_15190 74706789952d4f254091c1a8d4d10f73 127 Gene3D G3DSA:3.30.429.10 1 127 2.3E-47 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily UP17_15190 74706789952d4f254091c1a8d4d10f73 127 SUPERFAMILY SSF55331 2 127 7.05E-39 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 Gene3D G3DSA:3.10.20.70 2 107 5.7E-45 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 SMART SM01230 105 354 8.9E-142 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 Gene3D G3DSA:3.30.590.10 108 444 3.0E-147 T 11-10-2018 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 1.6E-141 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 1.2E-185 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 SUPERFAMILY SSF55931 105 442 3.24E-130 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 SUPERFAMILY SSF54368 5 104 2.22E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 UP17_08390 6657af477e89ee0349100d2af9b6ce39 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 98 4.6E-33 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 UP17_24245 06103db872de0efc3f73592a7355847e 356 Gene3D G3DSA:3.30.160.20 209 295 1.3E-94 T 11-10-2018 UP17_24245 06103db872de0efc3f73592a7355847e 356 Pfam PF00472 RF-1 domain 210 319 3.5E-38 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UP17_24245 06103db872de0efc3f73592a7355847e 356 Gene3D G3DSA:1.20.58.410 1 100 1.3E-7 T 11-10-2018 UP17_24245 06103db872de0efc3f73592a7355847e 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 354 3.1E-167 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 UP17_24245 06103db872de0efc3f73592a7355847e 356 Gene3D G3DSA:3.30.70.1660 110 340 1.3E-94 T 11-10-2018 UP17_24245 06103db872de0efc3f73592a7355847e 356 SUPERFAMILY SSF75620 8 351 3.53E-132 T 11-10-2018 UP17_24245 06103db872de0efc3f73592a7355847e 356 Pfam PF03462 PCRF domain 9 202 2.2E-74 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 UP17_24245 06103db872de0efc3f73592a7355847e 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 UP17_24245 06103db872de0efc3f73592a7355847e 356 SMART SM00937 62 177 3.7E-64 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 UP17_24245 06103db872de0efc3f73592a7355847e 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.065 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 UP17_21250 57fb75d048a0084a7f082f4aebf8a6d2 72 SUPERFAMILY SSF47413 1 69 4.5E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_21250 57fb75d048a0084a7f082f4aebf8a6d2 72 SMART SM00530 6 62 2.4E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_21250 57fb75d048a0084a7f082f4aebf8a6d2 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 66 2.0E-22 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_21250 57fb75d048a0084a7f082f4aebf8a6d2 72 Gene3D G3DSA:1.10.260.40 1 70 7.2E-9 T 11-10-2018 UP17_21870 dc2593ad1e3fcdeecaeb88bc498942f4 238 Pfam PF14080 Domain of unknown function (DUF4261) 154 229 6.3E-7 T 11-10-2018 IPR025357 Domain of unknown function DUF4261 UP17_15320 fac485f3bd4a61d1a379f0c8c99201ae 261 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 28 256 1.5E-85 T 11-10-2018 IPR014231 Sporulation protein YpjB UP17_15320 fac485f3bd4a61d1a379f0c8c99201ae 261 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 28 256 2.3E-77 T 11-10-2018 IPR014231 Sporulation protein YpjB UP17_00310 92d28ee4c5b65d04d70f8320e021f99a 186 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 37.023 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UP17_00310 92d28ee4c5b65d04d70f8320e021f99a 186 Gene3D G3DSA:3.40.50.1470 1 186 5.0E-71 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 UP17_00310 92d28ee4c5b65d04d70f8320e021f99a 186 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 UP17_00310 92d28ee4c5b65d04d70f8320e021f99a 186 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 185 1.5E-70 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UP17_00310 92d28ee4c5b65d04d70f8320e021f99a 186 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 4.9E-59 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 UP17_00310 92d28ee4c5b65d04d70f8320e021f99a 186 SUPERFAMILY SSF53178 1 185 1.19E-68 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 UP17_00810 762251133d85b409717029f8da61ccf2 121 SUPERFAMILY SSF46946 2 114 5.21E-46 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 UP17_00810 762251133d85b409717029f8da61ccf2 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00810 762251133d85b409717029f8da61ccf2 121 Gene3D G3DSA:4.10.910.10 72 121 7.3E-26 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00810 762251133d85b409717029f8da61ccf2 121 Gene3D G3DSA:1.10.8.50 1 71 6.6E-30 T 11-10-2018 UP17_00810 762251133d85b409717029f8da61ccf2 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.4E-34 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00810 762251133d85b409717029f8da61ccf2 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.961 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00810 762251133d85b409717029f8da61ccf2 121 PIRSF PIRSF002134 1 121 3.4E-43 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00810 762251133d85b409717029f8da61ccf2 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.6E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_16000 9c1a52e42fe6df56a1e9022387e25c57 327 Gene3D G3DSA:3.40.50.970 1 192 4.7E-93 T 11-10-2018 UP17_16000 9c1a52e42fe6df56a1e9022387e25c57 327 Gene3D G3DSA:3.40.50.920 193 327 1.0E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_16000 9c1a52e42fe6df56a1e9022387e25c57 327 SUPERFAMILY SSF52518 2 204 8.34E-74 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_16000 9c1a52e42fe6df56a1e9022387e25c57 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 1.6E-53 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_16000 9c1a52e42fe6df56a1e9022387e25c57 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 1.2E-42 T 11-10-2018 IPR033248 Transketolase, C-terminal domain UP17_16000 9c1a52e42fe6df56a1e9022387e25c57 327 SMART SM00861 4 179 5.0E-71 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_16000 9c1a52e42fe6df56a1e9022387e25c57 327 SUPERFAMILY SSF52922 188 325 3.14E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_05630 75cb3303feb697b6a79234de1435dce3 311 TIGRFAM TIGR00109 hemH: ferrochelatase 1 308 5.2E-99 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 UP17_05630 75cb3303feb697b6a79234de1435dce3 311 ProSitePatterns PS00534 Ferrochelatase signature. 178 196 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 UP17_05630 75cb3303feb697b6a79234de1435dce3 311 Gene3D G3DSA:3.40.50.1400 8 304 1.3E-105 T 11-10-2018 UP17_05630 75cb3303feb697b6a79234de1435dce3 311 SUPERFAMILY SSF53800 3 308 1.13E-88 T 11-10-2018 UP17_05630 75cb3303feb697b6a79234de1435dce3 311 Gene3D G3DSA:3.40.50.1400 148 289 1.3E-105 T 11-10-2018 UP17_05630 75cb3303feb697b6a79234de1435dce3 311 Hamap MF_00323 Ferrochelatase [hemH]. 4 308 31.933 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 UP17_05630 75cb3303feb697b6a79234de1435dce3 311 Pfam PF00762 Ferrochelatase 5 307 3.8E-80 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 UP17_05305 df3e7fc5d4f9caa4e250227ed2e7da65 155 SUPERFAMILY SSF54631 1 150 4.04E-32 T 11-10-2018 UP17_05305 df3e7fc5d4f9caa4e250227ed2e7da65 155 Pfam PF00571 CBS domain 3 58 8.7E-17 T 11-10-2018 IPR000644 CBS domain UP17_05305 df3e7fc5d4f9caa4e250227ed2e7da65 155 Pfam PF00571 CBS domain 93 147 9.1E-11 T 11-10-2018 IPR000644 CBS domain UP17_05305 df3e7fc5d4f9caa4e250227ed2e7da65 155 SMART SM00116 10 58 9.1E-13 T 11-10-2018 IPR000644 CBS domain UP17_05305 df3e7fc5d4f9caa4e250227ed2e7da65 155 SMART SM00116 99 147 2.4E-8 T 11-10-2018 IPR000644 CBS domain UP17_05305 df3e7fc5d4f9caa4e250227ed2e7da65 155 Gene3D G3DSA:3.10.580.10 1 151 1.1E-33 T 11-10-2018 UP17_20420 796da3582c07666049fab8cd85f61420 436 Gene3D G3DSA:2.30.40.10 11 426 7.3E-143 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_20420 796da3582c07666049fab8cd85f61420 436 Gene3D G3DSA:3.20.20.140 60 353 7.3E-143 T 11-10-2018 UP17_20420 796da3582c07666049fab8cd85f61420 436 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 435 42.099 T 11-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 UP17_20420 796da3582c07666049fab8cd85f61420 436 SUPERFAMILY SSF51338 2 432 4.61E-28 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_20420 796da3582c07666049fab8cd85f61420 436 Pfam PF01979 Amidohydrolase family 57 408 5.5E-72 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_20420 796da3582c07666049fab8cd85f61420 436 SUPERFAMILY SSF51556 59 358 6.47E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_14215 022b8ad4170b0706fb4988b13f7c6100 80 SUPERFAMILY SSF140652 2 69 1.83E-28 T 11-10-2018 IPR036806 YozE SAM-like superfamily UP17_14215 022b8ad4170b0706fb4988b13f7c6100 80 Hamap MF_01538 UPF0346 protein . 1 70 22.145 T 11-10-2018 IPR010673 Protein of unknown function UPF0346 UP17_14215 022b8ad4170b0706fb4988b13f7c6100 80 Pfam PF06855 YozE SAM-like fold 4 68 4.6E-26 T 11-10-2018 IPR023089 YozE SAM-like domain UP17_14215 022b8ad4170b0706fb4988b13f7c6100 80 Gene3D G3DSA:1.10.150.260 1 70 1.0E-27 T 11-10-2018 IPR036806 YozE SAM-like superfamily UP17_14215 022b8ad4170b0706fb4988b13f7c6100 80 PIRSF PIRSF037262 1 72 2.5E-33 T 11-10-2018 IPR010673 Protein of unknown function UPF0346 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 Hamap MF_00551 Uridine kinase [udk]. 3 207 41.923 T 11-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 SUPERFAMILY SSF52540 3 198 7.81E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 TIGRFAM TIGR00235 udk: uridine kinase 1 207 5.2E-92 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 Gene3D G3DSA:3.40.50.300 1 210 2.1E-65 T 11-10-2018 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 193 2.0E-43 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 PRINTS PR00988 Uridine kinase signature 36 47 2.6E-36 T 11-10-2018 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 PRINTS PR00988 Uridine kinase signature 81 96 2.6E-36 T 11-10-2018 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 PRINTS PR00988 Uridine kinase signature 151 162 2.6E-36 T 11-10-2018 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 PRINTS PR00988 Uridine kinase signature 137 147 2.6E-36 T 11-10-2018 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 PRINTS PR00988 Uridine kinase signature 6 23 2.6E-36 T 11-10-2018 UP17_16970 55e0c98bc8091e4eccccba12f05f63d5 211 PRINTS PR00988 Uridine kinase signature 173 186 2.6E-36 T 11-10-2018 UP17_01580 60cb0fcce05f3c29c95f39e485fd66ac 210 SUPERFAMILY SSF46785 153 207 1.43E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_01580 60cb0fcce05f3c29c95f39e485fd66ac 210 Pfam PF00072 Response regulator receiver domain 3 113 2.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01580 60cb0fcce05f3c29c95f39e485fd66ac 210 SMART SM00448 1 112 1.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01580 60cb0fcce05f3c29c95f39e485fd66ac 210 Gene3D G3DSA:3.40.50.12740 1 179 3.0E-34 T 11-10-2018 UP17_01580 60cb0fcce05f3c29c95f39e485fd66ac 210 SUPERFAMILY SSF52172 1 133 2.13E-34 T 11-10-2018 IPR011006 CheY-like superfamily UP17_15170 6f665e7d4477a9e3637053156d65eb77 231 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 128 199 8.7E-26 T 11-10-2018 IPR006343 DnaD domain UP17_15170 6f665e7d4477a9e3637053156d65eb77 231 Gene3D G3DSA:1.10.10.10 1 113 6.8E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15170 6f665e7d4477a9e3637053156d65eb77 231 Gene3D G3DSA:1.10.10.630 123 199 9.1E-32 T 11-10-2018 IPR034829 DnaD-like domain superfamily UP17_15170 6f665e7d4477a9e3637053156d65eb77 231 SUPERFAMILY SSF158499 129 193 2.48E-19 T 11-10-2018 IPR034829 DnaD-like domain superfamily UP17_15170 6f665e7d4477a9e3637053156d65eb77 231 Pfam PF07261 Replication initiation and membrane attachment 129 200 3.1E-26 T 11-10-2018 IPR006343 DnaD domain UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 SUPERFAMILY SSF53720 11 421 6.68E-116 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 Gene3D G3DSA:3.40.605.10 23 416 2.7E-166 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 PIRSF PIRSF000151 6 421 2.0E-178 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 328 350 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 Gene3D G3DSA:3.40.309.10 231 379 2.7E-166 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 18 411 6.0E-162 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 Pfam PF00171 Aldehyde dehydrogenase family 7 290 5.4E-15 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_12415 58843d888cf942cf89d8121b38f1c14b 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 10 421 41.883 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_22695 164d68f8cb7fea675696df21ea1bbc0d 276 Gene3D G3DSA:3.40.630.30 2 121 5.1E-10 T 11-10-2018 UP17_22695 164d68f8cb7fea675696df21ea1bbc0d 276 SUPERFAMILY SSF55729 4 119 6.81E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_22695 164d68f8cb7fea675696df21ea1bbc0d 276 SUPERFAMILY SSF55729 141 272 7.65E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_22695 164d68f8cb7fea675696df21ea1bbc0d 276 Pfam PF00583 Acetyltransferase (GNAT) family 153 260 9.3E-16 T 11-10-2018 IPR000182 GNAT domain UP17_22695 164d68f8cb7fea675696df21ea1bbc0d 276 Pfam PF13673 Acetyltransferase (GNAT) domain 42 102 2.6E-6 T 11-10-2018 IPR000182 GNAT domain UP17_22695 164d68f8cb7fea675696df21ea1bbc0d 276 Gene3D G3DSA:3.40.630.30 135 274 1.3E-24 T 11-10-2018 UP17_18550 9ee5314d62bd67edff4cd708781d54c5 212 Gene3D G3DSA:3.40.50.150 1 211 4.0E-73 T 11-10-2018 UP17_18550 9ee5314d62bd67edff4cd708781d54c5 212 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 30.239 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 UP17_18550 9ee5314d62bd67edff4cd708781d54c5 212 Pfam PF02390 Putative methyltransferase 39 207 1.9E-47 T 11-10-2018 UP17_18550 9ee5314d62bd67edff4cd708781d54c5 212 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 208 6.7E-59 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 UP17_18550 9ee5314d62bd67edff4cd708781d54c5 212 SUPERFAMILY SSF53335 11 209 1.09E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_06030 fdb9b0346f1ff2e8f1521390f60a2f61 287 Gene3D G3DSA:3.40.30.10 23 211 7.8E-35 T 11-10-2018 UP17_06030 fdb9b0346f1ff2e8f1521390f60a2f61 287 Pfam PF13743 Thioredoxin 21 213 1.4E-74 T 11-10-2018 UP17_06030 fdb9b0346f1ff2e8f1521390f60a2f61 287 Gene3D G3DSA:1.10.472.60 58 182 7.8E-35 T 11-10-2018 UP17_06030 fdb9b0346f1ff2e8f1521390f60a2f61 287 SUPERFAMILY SSF52833 16 220 5.5E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_23185 0c3170b486c72c00eeb4be644c068169 118 Gene3D G3DSA:3.40.30.10 1 116 2.1E-44 T 11-10-2018 UP17_23185 0c3170b486c72c00eeb4be644c068169 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 1.1E-33 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR UP17_23185 0c3170b486c72c00eeb4be644c068169 118 Pfam PF03960 ArsC family 47 115 3.2E-17 T 11-10-2018 IPR006660 Arsenate reductase-like UP17_23185 0c3170b486c72c00eeb4be644c068169 118 SUPERFAMILY SSF52833 3 117 5.54E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_16395 8afcc97e4d6fa28889893951bb374202 492 Pfam PF07508 Recombinase 180 277 8.8E-20 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 UP17_16395 8afcc97e4d6fa28889893951bb374202 492 Gene3D G3DSA:3.40.50.1390 7 112 3.8E-18 T 11-10-2018 UP17_16395 8afcc97e4d6fa28889893951bb374202 492 Gene3D G3DSA:1.10.10.2600 142 281 1.0E-18 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily UP17_16395 8afcc97e4d6fa28889893951bb374202 492 Pfam PF00239 Resolvase, N terminal domain 10 158 3.9E-23 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 UP17_16395 8afcc97e4d6fa28889893951bb374202 492 SUPERFAMILY SSF53041 10 158 2.22E-22 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 UP17_16395 8afcc97e4d6fa28889893951bb374202 492 SMART SM00857 10 158 4.3E-28 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 UP17_06955 588a766a7bae49dfd38b0d48b64444a1 371 Gene3D G3DSA:3.40.50.970 5 371 1.4E-121 T 11-10-2018 UP17_06955 588a766a7bae49dfd38b0d48b64444a1 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 364 1.7E-144 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 UP17_06955 588a766a7bae49dfd38b0d48b64444a1 371 SUPERFAMILY SSF52518 21 366 1.73E-102 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_06955 588a766a7bae49dfd38b0d48b64444a1 371 Pfam PF00676 Dehydrogenase E1 component 54 343 2.2E-101 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 SUPERFAMILY SSF53901 277 398 4.09E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 Pfam PF00108 Thiolase, N-terminal domain 4 268 1.3E-85 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 SUPERFAMILY SSF53901 3 276 1.01E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 Gene3D G3DSA:3.40.47.10 142 396 7.9E-163 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 Gene3D G3DSA:3.40.47.10 6 282 7.9E-163 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 397 2.4E-148 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 Pfam PF02803 Thiolase, C-terminal domain 276 397 1.1E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 PIRSF PIRSF000429 1 400 7.5E-144 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_04950 a1d6a5b2b311aedb0be0812c4b80f7b5 403 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 UP17_03185 09ff3401b05abecb46f361053463468e 280 Pfam PF00106 short chain dehydrogenase 6 196 1.6E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 7.0E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.6E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.6E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.6E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03185 09ff3401b05abecb46f361053463468e 280 PIRSF PIRSF000126 1 257 2.3E-78 T 11-10-2018 UP17_03185 09ff3401b05abecb46f361053463468e 280 Gene3D G3DSA:3.40.50.720 1 256 7.8E-60 T 11-10-2018 UP17_03185 09ff3401b05abecb46f361053463468e 280 SUPERFAMILY SSF51735 1 245 4.55E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 SUPERFAMILY SSF51735 122 278 4.02E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 Gene3D G3DSA:3.40.50.720 6 258 1.6E-117 T 11-10-2018 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.8E-85 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 2.8E-85 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.8E-85 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 2.8E-85 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 2.8E-85 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.8E-85 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.8E-85 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 1.6E-71 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 Gene3D G3DSA:3.40.50.10860 8 276 1.6E-117 T 11-10-2018 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 SUPERFAMILY SSF53223 1 121 3.17E-43 T 11-10-2018 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 39.324 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.3E-43 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_16090 dd8b57c1000d47248d048045d8b1e6b0 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 Pfam PF07732 Multicopper oxidase 102 208 1.5E-20 T 11-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 SUPERFAMILY SSF49503 85 207 1.94E-36 T 11-10-2018 IPR008972 Cupredoxin UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 PRINTS PR00695 Copper containing nitrite reductase signature 189 205 1.2E-5 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 PRINTS PR00695 Copper containing nitrite reductase signature 115 131 1.2E-5 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 PRINTS PR00695 Copper containing nitrite reductase signature 172 187 1.2E-5 T 11-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 Pfam PF07731 Multicopper oxidase 234 337 3.1E-11 T 11-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 Gene3D G3DSA:2.60.40.420 59 210 5.3E-44 T 11-10-2018 IPR008972 Cupredoxin UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 Gene3D G3DSA:2.60.40.420 213 337 1.8E-29 T 11-10-2018 IPR008972 Cupredoxin UP17_10965 acd084028cb8a4753a4e42a1be5cd6a0 338 SUPERFAMILY SSF49503 206 337 2.89E-23 T 11-10-2018 IPR008972 Cupredoxin UP17_00380 34ca6d5897c3fe3a5e0636eda7c06d47 245 SUPERFAMILY SSF53300 4 78 5.34E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily UP17_00380 34ca6d5897c3fe3a5e0636eda7c06d47 245 SUPERFAMILY SSF53300 132 225 2.82E-12 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily UP17_00380 34ca6d5897c3fe3a5e0636eda7c06d47 245 Pfam PF13519 von Willebrand factor type A domain 135 227 3.8E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A UP17_00380 34ca6d5897c3fe3a5e0636eda7c06d47 245 Pfam PF00092 von Willebrand factor type A domain 4 79 9.4E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A UP17_00380 34ca6d5897c3fe3a5e0636eda7c06d47 245 Gene3D G3DSA:3.40.50.410 1 235 1.4E-58 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily UP17_19865 1666d12903b2f70d9c967386e3c691ef 51 Pfam PF12841 YvrJ protein family 8 40 4.1E-15 T 11-10-2018 IPR024419 Protein of unknown function YvrJ UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 178 8.7E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Pfam PF00204 DNA gyrase B 225 395 1.9E-56 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 315 331 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 596 608 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 477 486 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 10 20 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 379 399 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 199 212 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 612 628 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 184 199 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 224 246 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR01159 DNA gyrase subunit B signature 365 379 1.8E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 SMART SM00387 35 179 1.5E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 571 632 9.9E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Gene3D G3DSA:3.40.50.670 413 645 3.6E-101 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Pfam PF01751 Toprim domain 426 535 5.2E-17 T 11-10-2018 IPR006171 TOPRIM domain UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 SUPERFAMILY SSF54211 225 396 8.91E-52 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 645 0.0 T 11-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 SUPERFAMILY SSF55874 9 216 7.2E-68 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Gene3D G3DSA:3.30.565.10 7 223 6.6E-87 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 SUPERFAMILY SSF56719 401 637 1.23E-85 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 493 509 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 39 54 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 116 130 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 575 591 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 531 543 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 74 87 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 271 284 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 427 441 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 PRINTS PR00418 DNA topoisomerase II family signature 511 528 2.2E-69 T 11-10-2018 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Gene3D G3DSA:3.30.230.10 224 405 1.2E-70 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 SMART SM00433 39 636 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_10680 11c143bd70b81ea301f0a5f9d69b2399 662 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 8 641 48.653 T 11-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UP17_05535 10d13d16c4e7a2f94c860546b77ddb24 288 SUPERFAMILY SSF54534 119 226 3.14E-34 T 11-10-2018 UP17_05535 10d13d16c4e7a2f94c860546b77ddb24 288 Pfam PF13616 PPIC-type PPIASE domain 136 227 5.3E-29 T 11-10-2018 UP17_05535 10d13d16c4e7a2f94c860546b77ddb24 288 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 282 21.029 T 11-10-2018 IPR023059 Foldase protein PrsA GO:0003755 UP17_05535 10d13d16c4e7a2f94c860546b77ddb24 288 Gene3D G3DSA:1.10.4030.30 44 231 2.7E-39 T 11-10-2018 UP17_05535 10d13d16c4e7a2f94c860546b77ddb24 288 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 165 186 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 UP17_05535 10d13d16c4e7a2f94c860546b77ddb24 288 Gene3D G3DSA:3.10.50.40 137 228 2.7E-39 T 11-10-2018 UP17_02825 77ca0eb0504974ebd922f512edba5657 396 Gene3D G3DSA:3.90.1150.10 38 387 1.4E-138 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_02825 77ca0eb0504974ebd922f512edba5657 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 UP17_02825 77ca0eb0504974ebd922f512edba5657 396 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 396 9.3E-192 T 11-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type UP17_02825 77ca0eb0504974ebd922f512edba5657 396 SUPERFAMILY SSF53383 8 394 5.57E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_02825 77ca0eb0504974ebd922f512edba5657 396 Gene3D G3DSA:3.40.640.10 58 294 1.4E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_02825 77ca0eb0504974ebd922f512edba5657 396 Pfam PF00155 Aminotransferase class I and II 43 383 4.3E-64 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_16585 ceabda846defeb7f2c61f448efc55918 254 Pfam PF00005 ABC transporter 24 172 4.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_16585 ceabda846defeb7f2c61f448efc55918 254 Gene3D G3DSA:3.40.50.300 2 243 3.9E-62 T 11-10-2018 UP17_16585 ceabda846defeb7f2c61f448efc55918 254 SMART SM00382 33 222 2.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_16585 ceabda846defeb7f2c61f448efc55918 254 SUPERFAMILY SSF52540 5 221 4.02E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16585 ceabda846defeb7f2c61f448efc55918 254 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_04470 3a4fd3bc55adbba8b2962ac88370bb3f 389 Pfam PF04285 Protein of unknown function (DUF444) 194 382 4.9E-65 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 UP17_04470 3a4fd3bc55adbba8b2962ac88370bb3f 389 Pfam PF04285 Protein of unknown function (DUF444) 12 183 1.6E-34 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 UP17_04470 3a4fd3bc55adbba8b2962ac88370bb3f 389 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 10 380 1.0E-179 T 11-10-2018 IPR014230 Sporulation protein YhbH UP17_12240 ad557fe6aa4b2425782338ed303b298b 250 SUPERFAMILY SSF53474 2 249 1.23E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_12240 ad557fe6aa4b2425782338ed303b298b 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 37 52 4.2E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_12240 ad557fe6aa4b2425782338ed303b298b 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 4.2E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_12240 ad557fe6aa4b2425782338ed303b298b 250 PRINTS PR00111 Alpha/beta hydrolase fold signature 78 91 4.2E-12 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_12240 ad557fe6aa4b2425782338ed303b298b 250 Gene3D G3DSA:3.40.50.1820 1 249 5.6E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_12240 ad557fe6aa4b2425782338ed303b298b 250 Pfam PF00561 alpha/beta hydrolase fold 13 232 1.1E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_16810 5d9c4cb9e5998fedd52f95ef284c4cfc 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.51 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_16810 5d9c4cb9e5998fedd52f95ef284c4cfc 88 Pfam PF01649 Ribosomal protein S20 2 84 4.0E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_16810 5d9c4cb9e5998fedd52f95ef284c4cfc 88 Gene3D G3DSA:1.20.58.110 1 87 3.7E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_16810 5d9c4cb9e5998fedd52f95ef284c4cfc 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 1.5E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_16810 5d9c4cb9e5998fedd52f95ef284c4cfc 88 SUPERFAMILY SSF46992 3 86 5.75E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_16810 5d9c4cb9e5998fedd52f95ef284c4cfc 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 68 2.0E-9 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_19410 d045713487673eb20d516581559de030 284 SUPERFAMILY SSF140959 27 284 2.35E-98 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_19410 d045713487673eb20d516581559de030 284 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 21 284 6.2E-126 T 11-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 UP17_19410 d045713487673eb20d516581559de030 284 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 21 284 39.916 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_19410 d045713487673eb20d516581559de030 284 Gene3D G3DSA:1.20.58.480 25 284 3.6E-96 T 11-10-2018 UP17_19410 d045713487673eb20d516581559de030 284 Pfam PF03301 Tryptophan 2,3-dioxygenase 20 209 1.2E-45 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_19410 d045713487673eb20d516581559de030 284 Pfam PF03301 Tryptophan 2,3-dioxygenase 210 283 4.2E-25 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_02175 713e14f4d1225f7c9d27745e2e39cc40 542 Pfam PF04234 CopC domain 24 119 2.6E-19 T 11-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 UP17_02175 713e14f4d1225f7c9d27745e2e39cc40 542 Pfam PF13115 YtkA-like 444 522 1.6E-7 T 11-10-2018 IPR032693 YtkA-like domain UP17_02175 713e14f4d1225f7c9d27745e2e39cc40 542 Pfam PF05425 Copper resistance protein D 332 423 1.2E-17 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 UP17_02175 713e14f4d1225f7c9d27745e2e39cc40 542 SUPERFAMILY SSF81296 24 119 4.13E-19 T 11-10-2018 IPR014756 Immunoglobulin E-set UP17_02175 713e14f4d1225f7c9d27745e2e39cc40 542 Gene3D G3DSA:2.60.40.1220 24 125 1.6E-23 T 11-10-2018 UP17_21605 adcecc79180e7e65388683fe7067d075 144 Gene3D G3DSA:1.10.10.10 1 143 5.7E-52 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21605 adcecc79180e7e65388683fe7067d075 144 Pfam PF02082 Transcriptional regulator 1 81 2.0E-20 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_21605 adcecc79180e7e65388683fe7067d075 144 SUPERFAMILY SSF46785 3 137 8.83E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_22905 640638c27325070109f086a522dd5c63 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 6.9E-21 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 UP17_22905 640638c27325070109f086a522dd5c63 94 PIRSF PIRSF028784 1 92 2.1E-34 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 SUPERFAMILY SSF48498 80 192 2.11E-18 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 Gene3D G3DSA:1.10.357.10 66 193 1.2E-16 T 11-10-2018 UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 9.9E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 SUPERFAMILY SSF46689 2 79 8.21E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 Gene3D G3DSA:1.10.10.60 1 65 1.2E-27 T 11-10-2018 UP17_02945 a89f1d33b8973deafeb03a112bca2229 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 7.0E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_25280 71e6ac4a0c10e1f22e7af5f82fd047ee 375 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 36 125 1.6E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 UP17_25280 71e6ac4a0c10e1f22e7af5f82fd047ee 375 Gene3D G3DSA:1.10.443.10 178 372 7.7E-41 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_25280 71e6ac4a0c10e1f22e7af5f82fd047ee 375 SUPERFAMILY SSF56349 196 361 2.88E-35 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_25280 71e6ac4a0c10e1f22e7af5f82fd047ee 375 Pfam PF00589 Phage integrase family 194 353 5.1E-28 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_25280 71e6ac4a0c10e1f22e7af5f82fd047ee 375 Gene3D G3DSA:1.10.150.130 24 131 1.9E-10 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_03720 31409641fad016de5e8482aa01885052 294 Gene3D G3DSA:3.40.190.290 92 293 7.1E-57 T 11-10-2018 UP17_03720 31409641fad016de5e8482aa01885052 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.4E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_03720 31409641fad016de5e8482aa01885052 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.4E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_03720 31409641fad016de5e8482aa01885052 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.4E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_03720 31409641fad016de5e8482aa01885052 294 Gene3D G3DSA:1.10.10.10 1 91 7.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03720 31409641fad016de5e8482aa01885052 294 Pfam PF03466 LysR substrate binding domain 89 290 6.2E-44 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_03720 31409641fad016de5e8482aa01885052 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.5E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_03720 31409641fad016de5e8482aa01885052 294 SUPERFAMILY SSF53850 90 291 1.11E-38 T 11-10-2018 UP17_03720 31409641fad016de5e8482aa01885052 294 SUPERFAMILY SSF46785 1 84 5.01E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 578 712 2.0E-13 T 11-10-2018 IPR010918 PurM-like, C-terminal domain UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 359 3.6E-33 T 11-10-2018 IPR010918 PurM-like, C-terminal domain UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 PIRSF PIRSF001587 8 740 0.0 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 4.7E-27 T 11-10-2018 IPR016188 PurM-like, N-terminal domain UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 8.4E-26 T 11-10-2018 IPR016188 PurM-like, N-terminal domain UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 740 327.529 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 SUPERFAMILY SSF56042 205 430 4.78E-56 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 SUPERFAMILY SSF55326 18 201 6.28E-53 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Gene3D G3DSA:3.30.1330.10 49 198 2.0E-134 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 SUPERFAMILY SSF56042 572 739 5.08E-37 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Gene3D G3DSA:3.90.650.10 34 361 2.0E-134 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Gene3D G3DSA:3.30.1330.10 392 564 1.3E-63 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 Gene3D G3DSA:3.90.650.10 570 740 3.4E-40 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 SUPERFAMILY SSF55326 404 569 5.5E-59 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily UP17_01980 ee6d12d6ac3025276128a3aae141cbad 740 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 738 0.0 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_03165 70199c434f78924e16962461d31068c6 676 SUPERFAMILY SSF56601 57 377 2.48E-79 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_03165 70199c434f78924e16962461d31068c6 676 Pfam PF00144 Beta-lactamase 60 379 9.7E-59 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_03165 70199c434f78924e16962461d31068c6 676 Pfam PF00395 S-layer homology domain 502 545 3.0E-5 T 11-10-2018 IPR001119 S-layer homology domain UP17_03165 70199c434f78924e16962461d31068c6 676 Gene3D G3DSA:3.40.710.10 48 390 5.3E-85 T 11-10-2018 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.5E-95 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.1E-39 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.333 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 Gene3D G3DSA:3.30.1140.32 107 207 3.2E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 SMART SM00322 59 124 2.0E-8 T 11-10-2018 IPR004087 K Homology domain GO:0003676 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 SUPERFAMILY SSF54814 2 105 6.28E-38 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 Gene3D G3DSA:3.30.300.20 17 106 2.8E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 Pfam PF07650 KH domain 37 109 3.1E-20 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00720 2cb42a2915a9bf43a312db5680b1143e 218 SUPERFAMILY SSF54821 107 205 3.14E-38 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_24685 52f246e80af62023c374912c49400311 300 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 18 300 45.865 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 SUPERFAMILY SSF55021 22 102 9.92E-15 T 11-10-2018 UP17_24685 52f246e80af62023c374912c49400311 300 PIRSF PIRSF036480 18 300 1.6E-109 T 11-10-2018 UP17_24685 52f246e80af62023c374912c49400311 300 Gene3D G3DSA:3.30.70.260 20 102 2.0E-21 T 11-10-2018 UP17_24685 52f246e80af62023c374912c49400311 300 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 22 300 1.9E-124 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 23 49 1.5E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 252 274 1.5E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 56 68 1.5E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 106 128 1.5E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 128 155 1.5E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 274 299 1.5E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_24685 52f246e80af62023c374912c49400311 300 SUPERFAMILY SSF53328 105 300 1.09E-59 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_24685 52f246e80af62023c374912c49400311 300 Gene3D G3DSA:3.40.50.170 105 300 5.1E-71 T 11-10-2018 UP17_24685 52f246e80af62023c374912c49400311 300 Pfam PF01842 ACT domain 23 74 2.8E-8 T 11-10-2018 IPR002912 ACT domain UP17_24685 52f246e80af62023c374912c49400311 300 Pfam PF00551 Formyl transferase 105 282 2.9E-41 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 SUPERFAMILY SSF55874 269 412 4.06E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 SMART SM00387 305 415 3.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 Gene3D G3DSA:3.30.565.10 264 416 1.4E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 413 5.6E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 8.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 412 8.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 370 8.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_04440 1fdea274dd56743978ea0defa51ae5ff 420 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 8.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_21715 4ba173a3b95e62cd4f5d6914c06e1c5b 228 SUPERFAMILY SSF52540 1 214 4.76E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_21715 4ba173a3b95e62cd4f5d6914c06e1c5b 228 Gene3D G3DSA:3.40.50.300 1 226 6.0E-48 T 11-10-2018 UP17_21715 4ba173a3b95e62cd4f5d6914c06e1c5b 228 SMART SM00382 26 200 2.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_21715 4ba173a3b95e62cd4f5d6914c06e1c5b 228 Pfam PF00005 ABC transporter 17 151 4.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 482 1.9E-191 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 SUPERFAMILY SSF48163 298 483 7.72E-47 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 SUPERFAMILY SSF52374 5 316 4.83E-114 T 11-10-2018 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 323 1.4E-123 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 Gene3D G3DSA:1.10.10.350 390 485 1.3E-33 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 484 33.86 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 UP17_00575 566e2994975c287aca1284ff31dbfa50 485 Gene3D G3DSA:3.40.50.620 1 332 9.3E-144 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 255 2.2E-74 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 Gene3D G3DSA:3.40.710.10 22 275 2.8E-89 T 11-10-2018 UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 Gene3D G3DSA:2.30.140.30 276 363 9.6E-26 T 11-10-2018 UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 126 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 149 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 SUPERFAMILY SSF56601 8 273 1.23E-69 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_15655 b720c85f1aa5af27f57e87ff593003ab 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 274 358 9.1E-7 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_06390 e497da82acd6066734495dbec7b3b141 261 Gene3D G3DSA:3.40.710.10 2 259 1.9E-64 T 11-10-2018 UP17_06390 e497da82acd6066734495dbec7b3b141 261 SUPERFAMILY SSF56601 9 256 2.44E-45 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_06390 e497da82acd6066734495dbec7b3b141 261 Pfam PF13354 Beta-lactamase enzyme family 30 232 1.6E-56 T 11-10-2018 UP17_02705 79aac6244b3c73414a1e6105395b70b1 171 Pfam PF01965 DJ-1/PfpI family 4 167 6.9E-53 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 UP17_02705 79aac6244b3c73414a1e6105395b70b1 171 SUPERFAMILY SSF52317 1 170 2.66E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_02705 79aac6244b3c73414a1e6105395b70b1 171 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 171 1.3E-55 T 11-10-2018 IPR006286 Deglycase PfpI UP17_02705 79aac6244b3c73414a1e6105395b70b1 171 Gene3D G3DSA:3.40.50.880 1 170 1.7E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 PIRSF PIRSF000097 2 272 5.7E-97 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 SUPERFAMILY SSF51430 8 266 8.9E-98 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 PRINTS PR00069 Aldo-keto reductase signature 39 63 4.1E-51 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 4.1E-51 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 PRINTS PR00069 Aldo-keto reductase signature 159 188 4.1E-51 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 PRINTS PR00069 Aldo-keto reductase signature 125 142 4.1E-51 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 PRINTS PR00069 Aldo-keto reductase signature 95 113 4.1E-51 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 Pfam PF00248 Aldo/keto reductase family 19 261 3.4E-55 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain UP17_04645 7867e9ac542fbc5870e02ca91f533d1b 275 Gene3D G3DSA:3.20.20.100 2 275 4.0E-124 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_13870 82fd51fc670409982c778e7324ea56e5 221 SMART SM00895 83 210 4.2E-14 T 11-10-2018 IPR011711 GntR, C-terminal UP17_13870 82fd51fc670409982c778e7324ea56e5 221 SUPERFAMILY SSF48008 79 217 4.18E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_13870 82fd51fc670409982c778e7324ea56e5 221 SUPERFAMILY SSF46785 2 82 7.7E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_13870 82fd51fc670409982c778e7324ea56e5 221 Gene3D G3DSA:1.20.120.530 74 220 1.5E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_13870 82fd51fc670409982c778e7324ea56e5 221 Gene3D G3DSA:1.10.10.10 8 73 1.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13870 82fd51fc670409982c778e7324ea56e5 221 SMART SM00345 14 72 9.7E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_13870 82fd51fc670409982c778e7324ea56e5 221 Pfam PF07729 FCD domain 84 209 7.0E-20 T 11-10-2018 IPR011711 GntR, C-terminal UP17_13870 82fd51fc670409982c778e7324ea56e5 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 4.1E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_00780 a2525817bce3767c2f6c82058a3f3b87 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 20.194 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00780 a2525817bce3767c2f6c82058a3f3b87 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 1.8E-21 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain UP17_00780 a2525817bce3767c2f6c82058a3f3b87 60 SUPERFAMILY SSF55129 3 59 6.15E-22 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily UP17_00780 a2525817bce3767c2f6c82058a3f3b87 60 Gene3D G3DSA:3.30.1390.20 1 59 3.0E-28 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily UP17_00780 a2525817bce3767c2f6c82058a3f3b87 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 3.5E-27 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00780 a2525817bce3767c2f6c82058a3f3b87 60 PIRSF PIRSF002211 1 60 4.0E-30 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00780 a2525817bce3767c2f6c82058a3f3b87 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site UP17_04905 bfc51503cc6b30ba2de4baa9b23cbd76 318 SUPERFAMILY SSF47240 37 286 3.01E-61 T 11-10-2018 IPR009078 Ferritin-like superfamily UP17_04905 bfc51503cc6b30ba2de4baa9b23cbd76 318 Pfam PF05138 Phenylacetic acid catabolic protein 27 308 1.7E-77 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UP17_04905 bfc51503cc6b30ba2de4baa9b23cbd76 318 Gene3D G3DSA:1.20.1260.10 9 317 7.2E-114 T 11-10-2018 IPR012347 Ferritin-like UP17_04905 bfc51503cc6b30ba2de4baa9b23cbd76 318 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 17 312 1.4E-132 T 11-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 UP17_09510 62219e9d102e43adc7227f65d47c1877 133 Gene3D G3DSA:3.10.450.50 3 133 5.4E-40 T 11-10-2018 UP17_09510 62219e9d102e43adc7227f65d47c1877 133 Pfam PF14534 Domain of unknown function (DUF4440) 7 117 6.4E-10 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 UP17_09510 62219e9d102e43adc7227f65d47c1877 133 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 6 122 7.8E-11 T 11-10-2018 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 UP17_09510 62219e9d102e43adc7227f65d47c1877 133 SUPERFAMILY SSF54427 4 126 8.61E-28 T 11-10-2018 IPR032710 NTF2-like domain superfamily UP17_20330 3460a58b3aa738a839b5ea14db27d005 149 Pfam PF00293 NUDIX domain 6 114 2.0E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_20330 3460a58b3aa738a839b5ea14db27d005 149 Gene3D G3DSA:3.90.79.10 2 147 3.4E-26 T 11-10-2018 UP17_20330 3460a58b3aa738a839b5ea14db27d005 149 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 UP17_20330 3460a58b3aa738a839b5ea14db27d005 149 PRINTS PR00502 NUDIX hydrolase family signature 29 43 4.5E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_20330 3460a58b3aa738a839b5ea14db27d005 149 PRINTS PR00502 NUDIX hydrolase family signature 43 58 4.5E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_20330 3460a58b3aa738a839b5ea14db27d005 149 SUPERFAMILY SSF55811 5 129 5.96E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_16540 d52128d4a1818f74643423fb47de5573 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 2.9E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 Gene3D G3DSA:2.40.500.20 91 202 1.5E-52 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 1.7E-43 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 SUPERFAMILY SSF46609 1 91 3.67E-39 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 SUPERFAMILY SSF54719 92 201 3.67E-49 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 Gene3D G3DSA:1.10.287.990 20 90 2.8E-32 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_16540 d52128d4a1818f74643423fb47de5573 202 PIRSF PIRSF000349 1 202 1.1E-87 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_09445 4c90e8a214aa82f435d34947ba363995 142 SUPERFAMILY SSF46785 2 78 9.85E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_02500 771c655f0be6003072b89a851722e9af 216 SMART SM00850 118 215 9.7E-32 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_02500 771c655f0be6003072b89a851722e9af 216 Pfam PF04397 LytTr DNA-binding domain 119 214 3.6E-27 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_02500 771c655f0be6003072b89a851722e9af 216 Gene3D G3DSA:2.20.25.10 179 216 4.9E-20 T 11-10-2018 UP17_02500 771c655f0be6003072b89a851722e9af 216 Gene3D G3DSA:2.40.50.40 108 178 2.2E-26 T 11-10-2018 UP17_11285 c692c7e95f2f082042ccb580d587f213 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11285 c692c7e95f2f082042ccb580d587f213 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11285 c692c7e95f2f082042ccb580d587f213 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11285 c692c7e95f2f082042ccb580d587f213 299 Gene3D G3DSA:1.10.10.10 1 89 3.5E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_11285 c692c7e95f2f082042ccb580d587f213 299 SUPERFAMILY SSF46785 1 86 5.45E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_11285 c692c7e95f2f082042ccb580d587f213 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.2E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11285 c692c7e95f2f082042ccb580d587f213 299 Gene3D G3DSA:3.40.190.10 164 269 4.0E-43 T 11-10-2018 UP17_11285 c692c7e95f2f082042ccb580d587f213 299 Gene3D G3DSA:3.40.190.10 90 288 4.0E-43 T 11-10-2018 UP17_11285 c692c7e95f2f082042ccb580d587f213 299 Pfam PF03466 LysR substrate binding domain 88 290 1.1E-36 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_11285 c692c7e95f2f082042ccb580d587f213 299 SUPERFAMILY SSF53850 88 290 6.29E-34 T 11-10-2018 UP17_16055 b0fe3a35a8c0bb0339001c2bb60b65ee 571 SUPERFAMILY SSF52540 2 220 2.94E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16055 b0fe3a35a8c0bb0339001c2bb60b65ee 571 Gene3D G3DSA:3.40.50.300 1 207 1.6E-45 T 11-10-2018 UP17_16055 b0fe3a35a8c0bb0339001c2bb60b65ee 571 Pfam PF13476 AAA domain 4 233 7.2E-17 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain UP17_16055 b0fe3a35a8c0bb0339001c2bb60b65ee 571 SUPERFAMILY SSF52540 3 517 3.63E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16055 b0fe3a35a8c0bb0339001c2bb60b65ee 571 Gene3D G3DSA:3.40.50.300 265 563 1.7E-53 T 11-10-2018 UP17_16055 b0fe3a35a8c0bb0339001c2bb60b65ee 571 PIRSF PIRSF003128 1 567 5.7E-186 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 UP17_16055 b0fe3a35a8c0bb0339001c2bb60b65ee 571 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 562 1.9E-190 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 UP17_08740 7355aafb3972aa18cdb2044331acfd4f 313 SUPERFAMILY SSF54593 5 280 2.57E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_08740 7355aafb3972aa18cdb2044331acfd4f 313 Gene3D G3DSA:3.10.180.10 7 302 4.6E-120 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_08740 7355aafb3972aa18cdb2044331acfd4f 313 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 266 4.5E-37 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_08740 7355aafb3972aa18cdb2044331acfd4f 313 Gene3D G3DSA:3.10.180.10 67 210 4.6E-120 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:2.40.50.140 223 324 1.8E-31 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:3.30.420.10 418 558 6.2E-43 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 828 1250 6.1E-97 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 234 1440 0.0 T 11-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:1.10.150.870 1290 1426 1.2E-51 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:3.30.1900.20 976 1098 2.6E-59 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 422 639 2.5E-60 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 SUPERFAMILY SSF53098 424 880 4.8E-105 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:3.20.20.140 334 417 1.1E-21 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:1.10.100.20 998 1045 2.6E-59 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1440 447.344 T 11-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Pfam PF14480 DNA polymerase III polC-type N-terminus I 11 82 7.2E-16 T 11-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:1.10.150.700 1236 1289 5.6E-15 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:1.10.150.700 1099 1192 1.4E-36 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 SUPERFAMILY SSF50249 241 323 1.93E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Pfam PF11490 DNA polymerase III polC-type N-terminus II 97 206 1.1E-24 T 11-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Pfam PF14579 Helix-hairpin-helix motif 1356 1433 1.0E-9 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Pfam PF02811 PHP domain 340 697 8.7E-53 T 11-10-2018 IPR004013 PHP domain GO:0003824 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 SMART SM00481 339 406 1.1E-25 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Gene3D G3DSA:3.20.20.140 559 806 2.2E-60 T 11-10-2018 UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 Pfam PF00929 Exonuclease 426 580 6.6E-39 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_07970 7d8f085d944827cd30c88991a5af757e 1440 SMART SM00479 424 590 3.8E-50 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.3E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 1.3E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 1.3E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 1.3E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 8.3E-57 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 233 15.558 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 ProSitePatterns PS01218 TatC family signature. 147 166 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site UP17_09715 6f3407fce94ac936e10d3320a41ade03 244 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 219 2.6E-56 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_04515 65c05407b7fd88d1d310612aae7ffc91 452 Pfam PF13751 Transposase DDE domain 324 441 8.9E-29 T 11-10-2018 IPR025668 Transposase DDE domain UP17_04515 65c05407b7fd88d1d310612aae7ffc91 452 Pfam PF05598 Transposase domain (DUF772) 52 127 3.6E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 165 269 1.8E-35 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 269 24.182 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 Gene3D G3DSA:3.40.50.720 1 166 1.3E-40 T 11-10-2018 UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 102 8.3E-16 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 269 1.5E-78 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 Gene3D G3DSA:1.10.3730.10 167 274 1.1E-37 T 11-10-2018 UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 PIRSF PIRSF000193 4 272 6.1E-71 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 SUPERFAMILY SSF51735 7 162 1.87E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_12425 0d5b78cfafa1f7302fc64741fbb11cfa 280 SUPERFAMILY SSF48179 164 272 2.21E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_08450 829f7cad80582fa967a70cc52400dc52 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 165 1.1E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_08450 829f7cad80582fa967a70cc52400dc52 184 Pfam PF08281 Sigma-70, region 4 112 164 3.3E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_08450 829f7cad80582fa967a70cc52400dc52 184 Pfam PF04542 Sigma-70 region 2 22 87 8.5E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_08450 829f7cad80582fa967a70cc52400dc52 184 SUPERFAMILY SSF88946 2 99 1.55E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_08450 829f7cad80582fa967a70cc52400dc52 184 Gene3D G3DSA:1.10.10.10 98 173 8.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08450 829f7cad80582fa967a70cc52400dc52 184 Gene3D G3DSA:1.10.1740.10 1 97 1.1E-21 T 11-10-2018 UP17_08450 829f7cad80582fa967a70cc52400dc52 184 TIGRFAM TIGR02954 Sig70_famx3: RNA polymerase sigma-70 factor, TIGR02954 family 1 171 9.9E-61 T 11-10-2018 IPR014300 RNA polymerase sigma-V type UP17_08450 829f7cad80582fa967a70cc52400dc52 184 SUPERFAMILY SSF88659 108 168 5.98E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_01750 9014955bf279d32ea15ca6cbab8d047b 149 SUPERFAMILY SSF111064 7 149 1.83E-52 T 11-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily UP17_01750 9014955bf279d32ea15ca6cbab8d047b 149 Gene3D G3DSA:3.40.1510.10 1 149 1.2E-62 T 11-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily UP17_01750 9014955bf279d32ea15ca6cbab8d047b 149 Pfam PF09021 HutP 9 147 1.2E-36 T 11-10-2018 IPR015111 Hut operon regulatory protein HutP UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 410 36.182 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 Pfam PF01566 Natural resistance-associated macrophage protein 37 384 4.2E-117 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 123 142 1.0E-29 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 300 319 1.0E-29 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 148 169 1.0E-29 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 95 121 1.0E-29 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 198 221 1.0E-29 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18580 9234aa0a86aa8d24ca9f1904cf7e9d54 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 15 378 4.2E-120 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_18415 dca6cb17dbc509df986ecddf5dd3faee 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18415 dca6cb17dbc509df986ecddf5dd3faee 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18415 dca6cb17dbc509df986ecddf5dd3faee 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 3.8E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18415 dca6cb17dbc509df986ecddf5dd3faee 218 SUPERFAMILY SSF46689 4 69 9.75E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_18415 dca6cb17dbc509df986ecddf5dd3faee 218 Gene3D G3DSA:1.10.357.10 2 206 2.0E-28 T 11-10-2018 UP17_09770 29219f742f8501e1d6e45c2b0d5f589a 432 SUPERFAMILY SSF159501 11 424 1.1E-113 T 11-10-2018 UP17_09770 29219f742f8501e1d6e45c2b0d5f589a 432 PIRSF PIRSF036794 7 430 6.9E-84 T 11-10-2018 IPR014622 Uncharacterised conserved protein UCP036794, erythromycin esterase-type UP17_09770 29219f742f8501e1d6e45c2b0d5f589a 432 Pfam PF05139 Erythromycin esterase 69 418 4.4E-103 T 11-10-2018 IPR007815 Erythromycin esterase GO:0046677 UP17_09770 29219f742f8501e1d6e45c2b0d5f589a 432 Gene3D G3DSA:3.40.1660.10 23 419 4.6E-63 T 11-10-2018 UP17_09770 29219f742f8501e1d6e45c2b0d5f589a 432 Gene3D G3DSA:3.30.1870.10 71 152 4.6E-63 T 11-10-2018 UP17_09770 29219f742f8501e1d6e45c2b0d5f589a 432 Gene3D G3DSA:1.20.1440.30 153 281 4.6E-63 T 11-10-2018 UP17_19650 bfcca0989b58c7de8cac149d39e438af 232 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 9 223 1.7E-66 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 UP17_19650 bfcca0989b58c7de8cac149d39e438af 232 SUPERFAMILY SSF100950 6 223 5.14E-76 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_19650 bfcca0989b58c7de8cac149d39e438af 232 Pfam PF01144 Coenzyme A transferase 13 220 3.8E-61 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19650 bfcca0989b58c7de8cac149d39e438af 232 SMART SM00882 11 222 1.5E-68 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19650 bfcca0989b58c7de8cac149d39e438af 232 Gene3D G3DSA:3.40.1080.10 7 224 1.9E-76 T 11-10-2018 UP17_01955 f878a5f3fca151868981865774786b4a 378 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 363 42.588 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 UP17_01955 f878a5f3fca151868981865774786b4a 378 Gene3D G3DSA:3.30.1490.20 120 188 1.5E-23 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_01955 f878a5f3fca151868981865774786b4a 378 Gene3D G3DSA:3.30.470.20 189 378 4.8E-77 T 11-10-2018 UP17_01955 f878a5f3fca151868981865774786b4a 378 SUPERFAMILY SSF52440 6 96 2.88E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_01955 f878a5f3fca151868981865774786b4a 378 SUPERFAMILY SSF56059 110 308 1.11E-59 T 11-10-2018 UP17_01955 f878a5f3fca151868981865774786b4a 378 SUPERFAMILY SSF51246 312 369 1.18E-14 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 UP17_01955 f878a5f3fca151868981865774786b4a 378 Pfam PF02222 ATP-grasp domain 120 288 7.0E-57 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UP17_01955 f878a5f3fca151868981865774786b4a 378 Gene3D G3DSA:3.40.50.20 3 119 2.9E-45 T 11-10-2018 UP17_01955 f878a5f3fca151868981865774786b4a 378 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 365 1.4E-125 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 Gene3D G3DSA:3.50.50.60 29 481 7.0E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 SUPERFAMILY SSF51905 27 485 1.25E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 Gene3D G3DSA:3.90.660.10 67 430 7.0E-116 T 11-10-2018 UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 SUPERFAMILY SSF54373 325 435 1.11E-29 T 11-10-2018 UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 Pfam PF01593 Flavin containing amine oxidoreductase 37 484 4.7E-70 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 PRINTS PR00757 Flavin-containing amine oxidase signature 466 483 3.6E-7 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 PRINTS PR00757 Flavin-containing amine oxidase signature 29 48 3.6E-7 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 PRINTS PR00757 Flavin-containing amine oxidase signature 329 348 3.6E-7 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 UP17_11075 894abeda1f796113fce69b5a900cfcaf 495 Gene3D G3DSA:1.20.1440.240 136 232 7.0E-116 T 11-10-2018 UP17_20005 f62fee4a45f856fabe48b4d57343d2ab 679 Pfam PF10592 AIPR protein 232 549 1.2E-81 T 11-10-2018 IPR018891 Abortive bacteriophage infection, resistance UP17_08805 8c6a1b3aaac067ecb98fd2a01da859b3 348 Pfam PF13222 Protein of unknown function (DUF4030) 237 345 1.9E-11 T 11-10-2018 IPR025108 Protein of unknown function DUF4030 UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 Gene3D G3DSA:2.60.40.10 1 124 7.1E-38 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 Pfam PF00128 Alpha amylase, catalytic domain 173 469 8.9E-84 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 SUPERFAMILY SSF51445 69 503 3.04E-125 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 SMART SM00642 139 497 3.8E-124 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 Pfam PF16657 Maltogenic Amylase, C-terminal domain 507 579 1.6E-7 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 SUPERFAMILY SSF81296 1 115 1.22E-29 T 11-10-2018 IPR014756 Immunoglobulin E-set UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 121 3.7E-40 T 11-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 SUPERFAMILY SSF51011 507 582 9.81E-11 T 11-10-2018 UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 Gene3D G3DSA:3.90.400.10 246 299 8.1E-158 T 11-10-2018 UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 Gene3D G3DSA:3.20.20.80 133 499 8.1E-158 T 11-10-2018 UP17_05780 52d6d183bc7537c01dfbc64de79ecccd 584 Gene3D G3DSA:2.60.40.1180 507 584 5.3E-12 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 SUPERFAMILY SSF53150 114 269 2.62E-30 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 872 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Pfam PF01624 MutS domain I 5 116 3.0E-44 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Pfam PF05188 MutS domain II 125 242 1.1E-7 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Gene3D G3DSA:3.30.420.110 124 250 7.0E-12 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 866 25.559 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 SUPERFAMILY SSF48334 256 556 4.05E-89 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Gene3D G3DSA:1.10.1420.10 255 551 6.6E-102 T 11-10-2018 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 SUPERFAMILY SSF52540 559 791 2.77E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 SUPERFAMILY SSF55271 2 110 2.88E-41 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 SMART SM00533 273 583 2.5E-117 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Gene3D G3DSA:1.10.1420.10 391 527 6.6E-102 T 11-10-2018 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 SMART SM00534 600 787 2.8E-117 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 PIRSF PIRSF037677 1 167 1.5E-29 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 PIRSF PIRSF037677 151 830 1.1E-134 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Pfam PF05192 MutS domain III 261 551 6.8E-45 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Pfam PF05190 MutS family domain IV 419 510 4.1E-30 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 681 697 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Pfam PF00488 MutS domain V 604 790 3.0E-82 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Gene3D G3DSA:3.40.50.300 560 852 3.6E-101 T 11-10-2018 UP17_08240 f040cd2ad237a71ea4e0a9234332504d 875 Gene3D G3DSA:3.40.1170.10 1 117 1.4E-46 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 UP17_02025 2022440fcd9e445c170c674831810dac 104 Pfam PF01371 Trp repressor protein 10 93 4.4E-33 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 UP17_02025 2022440fcd9e445c170c674831810dac 104 Gene3D G3DSA:1.10.1270.10 2 103 5.9E-39 T 11-10-2018 IPR038116 TrpR-like superfamily UP17_02025 2022440fcd9e445c170c674831810dac 104 PIRSF PIRSF012508 1 100 5.6E-48 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD UP17_02025 2022440fcd9e445c170c674831810dac 104 SUPERFAMILY SSF48295 3 95 4.18E-32 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_02025 2022440fcd9e445c170c674831810dac 104 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 2.4E-47 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD UP17_12690 5575f43359be74ebec3362b8f037d8ef 151 SUPERFAMILY SSF55811 14 143 7.58E-29 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_12690 5575f43359be74ebec3362b8f037d8ef 151 Gene3D G3DSA:3.90.79.10 1 148 1.6E-34 T 11-10-2018 UP17_12690 5575f43359be74ebec3362b8f037d8ef 151 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 UP17_12690 5575f43359be74ebec3362b8f037d8ef 151 PRINTS PR00502 NUDIX hydrolase family signature 43 57 2.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_12690 5575f43359be74ebec3362b8f037d8ef 151 PRINTS PR00502 NUDIX hydrolase family signature 57 72 2.4E-8 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_12690 5575f43359be74ebec3362b8f037d8ef 151 Pfam PF00293 NUDIX domain 20 141 9.3E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 Pfam PF07690 Major Facilitator Superfamily 15 406 1.2E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 Gene3D G3DSA:1.20.1720.10 11 219 3.5E-36 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 4.1E-14 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 355 375 4.1E-14 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 4.1E-14 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 4.1E-14 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 4.1E-14 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 4.1E-14 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 Gene3D G3DSA:1.20.1250.20 258 462 3.8E-18 T 11-10-2018 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 427 1.1E-89 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 SUPERFAMILY SSF103473 206 460 1.7E-25 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_20500 ace04c1bc31c5fed143eaa5de7175f4c 462 SUPERFAMILY SSF103473 10 191 7.59E-34 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_18025 5a4c971ba9ac926d84fde2c4070de64b 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 4.3E-119 T 11-10-2018 IPR008007 Peptidase M42 UP17_18025 5a4c971ba9ac926d84fde2c4070de64b 361 PIRSF PIRSF001123 4 361 1.3E-150 T 11-10-2018 IPR008007 Peptidase M42 UP17_18025 5a4c971ba9ac926d84fde2c4070de64b 361 SUPERFAMILY SSF53187 6 358 7.54E-71 T 11-10-2018 UP17_18025 5a4c971ba9ac926d84fde2c4070de64b 361 SUPERFAMILY SSF101821 73 182 8.7E-35 T 11-10-2018 UP17_18025 5a4c971ba9ac926d84fde2c4070de64b 361 Gene3D G3DSA:3.40.630.10 13 345 1.4E-137 T 11-10-2018 UP17_18025 5a4c971ba9ac926d84fde2c4070de64b 361 Gene3D G3DSA:2.40.30.40 77 164 1.4E-137 T 11-10-2018 IPR023367 Peptidase M42, domain 2 UP17_21130 07cbe8ff0927b98cbf82c01904c11139 389 Gene3D G3DSA:3.40.50.12780 22 359 6.2E-24 T 11-10-2018 UP17_21130 07cbe8ff0927b98cbf82c01904c11139 389 Pfam PF04443 Acyl-protein synthetase, LuxE 39 373 3.2E-47 T 11-10-2018 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723 UP17_21130 07cbe8ff0927b98cbf82c01904c11139 389 SUPERFAMILY SSF56801 96 352 5.04E-6 T 11-10-2018 UP17_04325 3d7fad226e4ef085448547da4ac5918a 176 Gene3D G3DSA:3.40.50.300 2 173 3.4E-14 T 11-10-2018 UP17_04325 3d7fad226e4ef085448547da4ac5918a 176 SUPERFAMILY SSF52540 5 134 4.79E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_19515 da2fb41532ed4a90a9585a585ff4b1a0 511 SMART SM00858 20 90 4.6E-4 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 UP17_19515 da2fb41532ed4a90a9585a585ff4b1a0 511 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 12 511 6.5E-275 T 11-10-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 UP17_19515 da2fb41532ed4a90a9585a585ff4b1a0 511 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 117 508 2.2E-143 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 UP17_19515 da2fb41532ed4a90a9585a585ff4b1a0 511 Gene3D G3DSA:3.90.1210.30 12 90 2.9E-25 T 11-10-2018 UP17_13025 009670dc5970374e74862473aed21636 598 SUPERFAMILY SSF55486 6 578 1.16E-116 T 11-10-2018 UP17_13025 009670dc5970374e74862473aed21636 598 Pfam PF01432 Peptidase family M3 204 583 2.1E-68 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 UP17_13025 009670dc5970374e74862473aed21636 598 Gene3D G3DSA:1.10.1370.20 227 598 3.2E-133 T 11-10-2018 UP17_13025 009670dc5970374e74862473aed21636 598 Gene3D G3DSA:1.20.140.70 24 178 2.4E-41 T 11-10-2018 UP17_13025 009670dc5970374e74862473aed21636 598 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 7 594 4.2E-187 T 11-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 UP17_13025 009670dc5970374e74862473aed21636 598 Gene3D G3DSA:1.10.287.830 180 225 2.0E-15 T 11-10-2018 UP17_13025 009670dc5970374e74862473aed21636 598 Pfam PF08439 Oligopeptidase F 114 182 6.4E-17 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain UP17_14750 a7b2709e9eb87d9473075a301618fbbe 298 SUPERFAMILY SSF53067 111 297 8.96E-43 T 11-10-2018 UP17_14750 a7b2709e9eb87d9473075a301618fbbe 298 SUPERFAMILY SSF53067 1 106 2.81E-18 T 11-10-2018 UP17_14750 a7b2709e9eb87d9473075a301618fbbe 298 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 262 1.0E-30 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 UP17_14750 a7b2709e9eb87d9473075a301618fbbe 298 Gene3D G3DSA:3.30.420.40 4 293 1.9E-69 T 11-10-2018 UP17_14750 a7b2709e9eb87d9473075a301618fbbe 298 Gene3D G3DSA:3.30.420.40 110 281 1.9E-69 T 11-10-2018 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 Pfam PF00128 Alpha amylase, catalytic domain 28 373 6.2E-115 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 Gene3D G3DSA:2.60.40.1180 477 549 2.8E-16 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 SUPERFAMILY SSF51445 4 473 3.1E-156 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 Gene3D G3DSA:3.20.20.80 171 476 6.5E-124 T 11-10-2018 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 SMART SM00642 13 415 3.6E-151 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 Gene3D G3DSA:3.20.20.80 1 109 8.1E-49 T 11-10-2018 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 Gene3D G3DSA:3.90.400.10 110 170 6.8E-34 T 11-10-2018 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 PRINTS PR00110 Alpha-amylase signature 193 204 4.1E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 PRINTS PR00110 Alpha-amylase signature 316 328 4.1E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 PRINTS PR00110 Alpha-amylase signature 92 103 4.1E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 UP17_05795 814a1a1d5d8c595a4202b68c09d2cee2 549 SUPERFAMILY SSF51011 476 548 1.59E-12 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SMART SM00646 478 586 1.4E-27 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Gene3D G3DSA:2.30.30.40 335 397 9.5E-12 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Pfam PF08239 Bacterial SH3 domain 269 320 2.1E-7 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Pfam PF08239 Bacterial SH3 domain 346 393 3.5E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Pfam PF08239 Bacterial SH3 domain 196 245 5.8E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Pfam PF08239 Bacterial SH3 domain 39 89 1.6E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Pfam PF08239 Bacterial SH3 domain 112 163 1.3E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SUPERFAMILY SSF53187 417 589 2.51E-49 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 419 586 4.2E-44 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Gene3D G3DSA:3.40.630.40 414 590 8.8E-53 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Gene3D G3DSA:2.30.30.40 27 94 7.3E-16 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Gene3D G3DSA:2.30.30.40 255 323 5.2E-14 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Gene3D G3DSA:2.30.30.40 96 165 2.4E-16 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SUPERFAMILY SSF50044 129 165 8.45E-5 T 11-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 Gene3D G3DSA:2.30.30.40 187 254 1.7E-15 T 11-10-2018 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SMART SM00287 30 92 9.2E-15 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SMART SM00287 187 248 1.1E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SMART SM00287 260 322 1.3E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SMART SM00287 335 399 3.5E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 SMART SM00287 104 165 4.5E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 PIRSF PIRSF037846 330 590 2.8E-93 T 11-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 PIRSF PIRSF037846 1 261 4.0E-54 T 11-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 UP17_17360 d5986066ffef37c577e0307ae0b4400b 590 PIRSF PIRSF037846 253 342 5.5E-15 T 11-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 UP17_16645 18613de03e7f47f43e24f892c0084691 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 5 148 28.756 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 UP17_16645 18613de03e7f47f43e24f892c0084691 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 20 146 1.0E-40 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 UP17_25695 4c9a3dea25043a05dcd7526a65a54d1e 109 Pfam PF16943 Cag pathogenicity island, type IV secretory system 22 108 3.6E-20 T 11-10-2018 IPR031607 Cag pathogenicity island, type IV secretory system UP17_07590 e105448159d59802a55c8115d0297818 185 Gene3D G3DSA:1.10.10.10 1 60 2.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_07590 e105448159d59802a55c8115d0297818 185 SUPERFAMILY SSF46785 5 51 8.85E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_07590 e105448159d59802a55c8115d0297818 185 SUPERFAMILY SSF54637 74 183 4.92E-24 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_07590 e105448159d59802a55c8115d0297818 185 Pfam PF08220 DeoR-like helix-turn-helix domain 8 46 3.8E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_07590 e105448159d59802a55c8115d0297818 185 PIRSF PIRSF037733 1 185 3.0E-83 T 11-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 UP17_07590 e105448159d59802a55c8115d0297818 185 Hamap MF_01814 Transcription factor FapR [fapR]. 1 185 36.95 T 11-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 UP17_07590 e105448159d59802a55c8115d0297818 185 Gene3D G3DSA:3.10.129.10 68 185 1.1E-37 T 11-10-2018 UP17_11690 7e02bedebea3491c20f90be3192dfa05 410 SUPERFAMILY SSF55031 213 323 1.67E-19 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_11690 7e02bedebea3491c20f90be3192dfa05 410 SUPERFAMILY SSF53187 6 407 2.46E-88 T 11-10-2018 UP17_11690 7e02bedebea3491c20f90be3192dfa05 410 PIRSF PIRSF001235 6 410 1.2E-134 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 UP17_11690 7e02bedebea3491c20f90be3192dfa05 410 Pfam PF01546 Peptidase family M20/M25/M40 80 405 4.3E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_11690 7e02bedebea3491c20f90be3192dfa05 410 Gene3D G3DSA:3.40.630.10 18 402 1.3E-136 T 11-10-2018 UP17_11690 7e02bedebea3491c20f90be3192dfa05 410 Gene3D G3DSA:3.30.70.360 213 326 1.3E-136 T 11-10-2018 UP17_11690 7e02bedebea3491c20f90be3192dfa05 410 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 405 1.6E-121 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 UP17_08880 151732db7a855f541cb0b64514f8e6aa 206 TIGRFAM TIGR01076 sortase_fam: sortase 78 196 5.4E-29 T 11-10-2018 IPR005754 Sortase family UP17_08880 151732db7a855f541cb0b64514f8e6aa 206 SUPERFAMILY SSF63817 66 202 9.16E-35 T 11-10-2018 IPR023365 Sortase domain superfamily UP17_08880 151732db7a855f541cb0b64514f8e6aa 206 Pfam PF04203 Sortase family 80 200 1.4E-27 T 11-10-2018 IPR005754 Sortase family UP17_08880 151732db7a855f541cb0b64514f8e6aa 206 Gene3D G3DSA:2.40.260.10 68 204 2.5E-40 T 11-10-2018 IPR023365 Sortase domain superfamily UP17_17820 69c3df68def406c0b1c9b22804d0bcd0 479 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 3 464 4.8E-141 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_17820 69c3df68def406c0b1c9b22804d0bcd0 479 PIRSF PIRSF005690 1 479 1.0E-143 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_07265 d045130b3a757b410de3b07cc7858400 542 PIRSF PIRSF012535 1 542 7.8E-187 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC UP17_07265 d045130b3a757b410de3b07cc7858400 542 Pfam PF10079 Bacillithiol biosynthesis BshC 1 538 2.0E-171 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC UP17_07265 d045130b3a757b410de3b07cc7858400 542 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 542 31.182 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC UP17_07265 d045130b3a757b410de3b07cc7858400 542 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 12 540 3.3E-180 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC UP17_13535 17cbab080013f2166d1d176cbf3f211c 148 SUPERFAMILY SSF54631 8 123 1.52E-29 T 11-10-2018 UP17_13535 17cbab080013f2166d1d176cbf3f211c 148 Pfam PF00571 CBS domain 74 123 1.5E-9 T 11-10-2018 IPR000644 CBS domain UP17_13535 17cbab080013f2166d1d176cbf3f211c 148 Pfam PF00571 CBS domain 10 59 1.4E-10 T 11-10-2018 IPR000644 CBS domain UP17_13535 17cbab080013f2166d1d176cbf3f211c 148 Gene3D G3DSA:3.10.580.10 1 129 1.2E-32 T 11-10-2018 UP17_13535 17cbab080013f2166d1d176cbf3f211c 148 SMART SM00116 16 63 0.0014 T 11-10-2018 IPR000644 CBS domain UP17_13535 17cbab080013f2166d1d176cbf3f211c 148 SMART SM00116 80 127 4.3E-8 T 11-10-2018 IPR000644 CBS domain UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 Pfam PF00753 Metallo-beta-lactamase superfamily 13 180 2.1E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 Gene3D G3DSA:3.60.15.10 1 259 2.8E-90 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 SMART SM00450 375 470 2.7E-22 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 SUPERFAMILY SSF52821 236 351 2.75E-13 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 SMART SM00849 12 196 4.3E-26 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 Gene3D G3DSA:3.40.250.10 261 363 3.9E-19 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 SUPERFAMILY SSF52821 367 467 1.31E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 SUPERFAMILY SSF56281 7 257 1.96E-50 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 Pfam PF00581 Rhodanese-like domain 386 466 1.1E-15 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_04340 49a3d6885f66c6262ed25e349b1bc526 477 Gene3D G3DSA:3.40.250.10 369 471 1.7E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_14910 4b353b268c20493eb3c3f802889ee24c 156 Pfam PF03830 PTS system sorbose subfamily IIB component 3 148 1.4E-44 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 UP17_14910 4b353b268c20493eb3c3f802889ee24c 156 Gene3D G3DSA:3.40.35.10 1 156 7.3E-49 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 UP17_14910 4b353b268c20493eb3c3f802889ee24c 156 SUPERFAMILY SSF52728 1 154 1.12E-42 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 UP17_00565 a53ece315b42f5975dc924f5db82ec68 227 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 221 42.488 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 UP17_00565 a53ece315b42f5975dc924f5db82ec68 227 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 222 4.1E-74 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 UP17_00565 a53ece315b42f5975dc924f5db82ec68 227 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 221 2.1E-73 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 UP17_00565 a53ece315b42f5975dc924f5db82ec68 227 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 99 106 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 UP17_00565 a53ece315b42f5975dc924f5db82ec68 227 Gene3D G3DSA:3.90.550.10 2 226 3.7E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_00565 a53ece315b42f5975dc924f5db82ec68 227 SUPERFAMILY SSF53448 5 221 2.19E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_10250 aac2e3ec0bc491cece28be068531d8f1 336 Pfam PF03308 ArgK protein 29 300 4.1E-98 T 11-10-2018 UP17_10250 aac2e3ec0bc491cece28be068531d8f1 336 Gene3D G3DSA:1.20.5.170 7 57 3.0E-16 T 11-10-2018 UP17_10250 aac2e3ec0bc491cece28be068531d8f1 336 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 24 328 1.1E-97 T 11-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10250 aac2e3ec0bc491cece28be068531d8f1 336 Gene3D G3DSA:3.40.50.300 59 267 5.0E-75 T 11-10-2018 UP17_10250 aac2e3ec0bc491cece28be068531d8f1 336 SUPERFAMILY SSF52540 10 332 5.99E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10250 aac2e3ec0bc491cece28be068531d8f1 336 Gene3D G3DSA:1.10.287.130 270 335 1.6E-15 T 11-10-2018 UP17_20550 a40c3963d22f20796ac38e36451a5305 96 SUPERFAMILY SSF46689 19 90 1.31E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_20550 a40c3963d22f20796ac38e36451a5305 96 Pfam PF01418 Helix-turn-helix domain, rpiR family 22 89 6.5E-20 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 UP17_20550 a40c3963d22f20796ac38e36451a5305 96 Gene3D G3DSA:1.10.10.10 17 96 1.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 257 1.3E-83 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 Gene3D G3DSA:1.10.10.10 202 259 1.5E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 Pfam PF04545 Sigma-70, region 4 207 253 3.1E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 Pfam PF04542 Sigma-70 region 2 42 110 2.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 SUPERFAMILY SSF88946 6 110 3.27E-34 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 1.9E-155 T 11-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 256 1.9E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 SUPERFAMILY SSF88659 175 257 1.59E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 Pfam PF04539 Sigma-70 region 3 124 176 1.2E-7 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 PIRSF PIRSF000770 16 259 1.0E-33 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 Gene3D G3DSA:1.20.120.1810 3 110 1.4E-26 T 11-10-2018 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 SUPERFAMILY SSF88659 114 189 3.18E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 Gene3D G3DSA:1.10.10.10 111 164 2.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 PRINTS PR00046 Major sigma-70 factor signature 227 242 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 PRINTS PR00046 Major sigma-70 factor signature 90 98 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 PRINTS PR00046 Major sigma-70 factor signature 242 253 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 PRINTS PR00046 Major sigma-70 factor signature 66 79 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07365 dc18d0c59d5dbd7255a83302815b9656 259 PRINTS PR00046 Major sigma-70 factor signature 210 222 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_24635 c4a02fb8b9bed5dd87b87242187b8f38 302 Pfam PF01636 Phosphotransferase enzyme family 31 268 1.2E-26 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase UP17_24635 c4a02fb8b9bed5dd87b87242187b8f38 302 Gene3D G3DSA:3.30.200.20 13 103 9.3E-28 T 11-10-2018 UP17_24635 c4a02fb8b9bed5dd87b87242187b8f38 302 SUPERFAMILY SSF56112 11 280 6.51E-29 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_24635 c4a02fb8b9bed5dd87b87242187b8f38 302 Gene3D G3DSA:3.90.1200.10 112 296 3.6E-30 T 11-10-2018 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 Gene3D G3DSA:2.40.50.100 1 102 8.7E-27 T 11-10-2018 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 SUPERFAMILY SSF47005 119 162 1.96E-8 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 Pfam PF02817 e3 binding domain 125 160 8.1E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 SUPERFAMILY SSF52777 195 423 7.12E-85 T 11-10-2018 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 Gene3D G3DSA:4.10.320.10 113 165 5.6E-14 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 Gene3D G3DSA:3.30.559.10 195 424 6.8E-89 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 Pfam PF00364 Biotin-requiring enzyme 3 74 1.4E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_13985 ce909ddc709db89a564adc9d134dec18 425 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 424 3.7E-171 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 196 423 1.5E-77 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 UP17_13985 ce909ddc709db89a564adc9d134dec18 425 SUPERFAMILY SSF51230 2 92 2.62E-26 T 11-10-2018 IPR011053 Single hybrid motif UP17_02245 7e802b1c5ce246d37cc0542db13a4ac7 225 Gene3D G3DSA:1.10.10.10 128 225 3.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_02245 7e802b1c5ce246d37cc0542db13a4ac7 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 2.4E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_02245 7e802b1c5ce246d37cc0542db13a4ac7 225 SMART SM00862 145 220 1.0E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_02245 7e802b1c5ce246d37cc0542db13a4ac7 225 SUPERFAMILY SSF52172 1 173 4.98E-40 T 11-10-2018 IPR011006 CheY-like superfamily UP17_02245 7e802b1c5ce246d37cc0542db13a4ac7 225 SMART SM00448 2 112 6.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_02245 7e802b1c5ce246d37cc0542db13a4ac7 225 Gene3D G3DSA:3.40.50.2300 1 127 6.4E-35 T 11-10-2018 UP17_02245 7e802b1c5ce246d37cc0542db13a4ac7 225 Pfam PF00072 Response regulator receiver domain 4 112 1.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 SMART SM00267 143 316 1.3E-38 T 11-10-2018 IPR000160 GGDEF domain UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 SUPERFAMILY SSF55073 159 317 7.38E-42 T 11-10-2018 IPR029787 Nucleotide cyclase UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 311 1.1E-37 T 11-10-2018 IPR000160 GGDEF domain UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 Gene3D G3DSA:3.30.70.270 150 319 6.6E-46 T 11-10-2018 UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 Pfam PF13185 GAF domain 11 148 2.7E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 Gene3D G3DSA:3.30.450.40 1 149 3.3E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 154 315 6.0E-40 T 11-10-2018 IPR000160 GGDEF domain UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 SUPERFAMILY SSF55781 11 148 4.36E-16 T 11-10-2018 UP17_11600 4f2367cae9889f4c91555d60f591bb47 319 SMART SM00065 11 158 0.006 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_05815 05ebb6b98d1ec6bd2f1c73d62ab1b2ee 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 1.3E-60 T 11-10-2018 IPR007551 Protein of unknown function DUF520 UP17_05815 05ebb6b98d1ec6bd2f1c73d62ab1b2ee 163 SUPERFAMILY SSF89963 92 163 1.62E-25 T 11-10-2018 IPR036183 YajQ-like superfamily UP17_05815 05ebb6b98d1ec6bd2f1c73d62ab1b2ee 163 SUPERFAMILY SSF89963 5 90 4.71E-29 T 11-10-2018 IPR036183 YajQ-like superfamily UP17_05815 05ebb6b98d1ec6bd2f1c73d62ab1b2ee 163 Gene3D G3DSA:3.30.70.990 12 101 8.9E-61 T 11-10-2018 IPR035570 UPF0234, N-terminal UP17_05815 05ebb6b98d1ec6bd2f1c73d62ab1b2ee 163 Gene3D G3DSA:3.30.70.860 6 163 8.9E-61 T 11-10-2018 IPR035571 UPF0234-like, C-terminal UP17_05815 05ebb6b98d1ec6bd2f1c73d62ab1b2ee 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 25.965 T 11-10-2018 IPR007551 Protein of unknown function DUF520 UP17_05970 d50a01528eeb9b6454138848c82385cb 251 Hamap MF_01860 UPF0736 protein . 1 251 49.217 T 11-10-2018 IPR020909 UPF0736 UP17_05970 d50a01528eeb9b6454138848c82385cb 251 Pfam PF12227 Protein of unknown function (DUF3603) 35 246 1.0E-109 T 11-10-2018 IPR020909 UPF0736 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 SUPERFAMILY SSF50800 70 167 8.02E-25 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 471 6.3E-38 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 505 576 8.9E-20 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 Pfam PF00224 Pyruvate kinase, barrel domain 1 344 1.3E-159 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 Gene3D G3DSA:3.50.30.10 475 586 5.3E-34 T 11-10-2018 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 Gene3D G3DSA:3.20.20.60 4 332 4.0E-152 T 11-10-2018 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.8E-193 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 Gene3D G3DSA:3.40.1380.20 340 473 8.2E-49 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 Gene3D G3DSA:2.40.33.10 71 167 4.0E-152 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 SUPERFAMILY SSF51621 1 342 5.23E-107 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 SUPERFAMILY SSF52009 466 583 1.83E-28 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_18190 d3752ae1f0489d5d984431ce216b857d 586 SUPERFAMILY SSF52935 323 473 1.06E-45 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 UP17_08910 0b11ef807e904f4264163db817657ffd 272 Pfam PF01261 Xylose isomerase-like TIM barrel 24 224 6.9E-20 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain UP17_08910 0b11ef807e904f4264163db817657ffd 272 Gene3D G3DSA:3.20.20.150 1 270 9.8E-43 T 11-10-2018 UP17_08910 0b11ef807e904f4264163db817657ffd 272 SUPERFAMILY SSF51658 7 268 2.36E-42 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily UP17_14475 ea7b20995bdcb9d6d7ba472ce7be808e 186 SUPERFAMILY SSF47413 1 66 1.15E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_14475 ea7b20995bdcb9d6d7ba472ce7be808e 186 Pfam PF01381 Helix-turn-helix 8 59 6.7E-18 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_14475 ea7b20995bdcb9d6d7ba472ce7be808e 186 Pfam PF07883 Cupin domain 114 176 6.6E-13 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_14475 ea7b20995bdcb9d6d7ba472ce7be808e 186 Gene3D G3DSA:1.10.260.40 1 72 1.0E-21 T 11-10-2018 UP17_14475 ea7b20995bdcb9d6d7ba472ce7be808e 186 SUPERFAMILY SSF51182 54 178 1.06E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_14475 ea7b20995bdcb9d6d7ba472ce7be808e 186 SMART SM00530 6 61 2.5E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_14475 ea7b20995bdcb9d6d7ba472ce7be808e 186 Gene3D G3DSA:2.60.120.10 88 185 2.0E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 192 3.7E-20 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 SUPERFAMILY SSF52540 1 196 3.55E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 439 4.0E-38 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 5 448 5.4E-146 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 Gene3D G3DSA:3.40.50.300 4 188 4.6E-24 T 11-10-2018 UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 3 440 45.074 T 11-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 SUPERFAMILY SSF52317 246 453 2.95E-33 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_10445 c7baa81329efa43918b991577f2e5ec4 464 Gene3D G3DSA:3.40.50.880 256 458 1.2E-11 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_16760 9d9ec2a24effc75de2a283964dfca63d 313 Gene3D G3DSA:3.40.50.150 116 313 1.4E-61 T 11-10-2018 UP17_16760 9d9ec2a24effc75de2a283964dfca63d 313 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.457 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 UP17_16760 9d9ec2a24effc75de2a283964dfca63d 313 SUPERFAMILY SSF53335 94 310 9.71E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_16760 9d9ec2a24effc75de2a283964dfca63d 313 PIRSF PIRSF000401 1 313 1.8E-110 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 UP17_16760 9d9ec2a24effc75de2a283964dfca63d 313 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 3.9E-107 T 11-10-2018 UP17_16760 9d9ec2a24effc75de2a283964dfca63d 313 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 4.6E-102 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 Pfam PF00156 Phosphoribosyl transferase domain 108 248 3.0E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 9 72 2.0E-23 T 11-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 Gene3D G3DSA:1.10.10.10 1 73 1.7E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 270 1.7E-115 T 11-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 Gene3D G3DSA:3.40.50.2020 74 274 1.8E-56 T 11-10-2018 UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 SUPERFAMILY SSF53271 93 254 1.36E-37 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 SUPERFAMILY SSF46785 2 72 1.5E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_00275 e0c99c03abf743b5348b4cccba81501c 274 Pfam PF09182 Bacterial purine repressor, N-terminal 4 72 1.2E-31 T 11-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 419 7.0E-20 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 PIRSF PIRSF000445 1 433 1.8E-152 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 6.5E-45 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 SUPERFAMILY SSF51735 161 315 1.98E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 Gene3D G3DSA:3.40.50.720 161 313 3.6E-44 T 11-10-2018 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 SUPERFAMILY SSF69742 1 158 1.44E-46 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 SUPERFAMILY SSF69075 317 420 1.57E-17 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 1.5E-154 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 29.459 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 4.4E-46 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_17670 1b12c2c1dc8986d024658e44662c9dfe 449 Gene3D G3DSA:3.30.460.30 1 158 1.0E-54 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 UP17_18530 41b03f2266bbab961c8c174e341aa600 173 Hamap MF_00648 Non-canonical purine NTP phosphatase. 1 164 26.532 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase UP17_18530 41b03f2266bbab961c8c174e341aa600 173 Gene3D G3DSA:3.90.950.10 1 172 2.8E-50 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like UP17_18530 41b03f2266bbab961c8c174e341aa600 173 SUPERFAMILY SSF52972 2 162 2.18E-45 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like UP17_18530 41b03f2266bbab961c8c174e341aa600 173 Pfam PF01931 Protein of unknown function DUF84 6 156 2.6E-45 T 11-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 Gene3D G3DSA:1.20.140.10 236 378 4.1E-56 T 11-10-2018 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 PIRSF PIRSF016578 4 115 0.0076 T 11-10-2018 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 PIRSF PIRSF016578 128 374 8.5E-17 T 11-10-2018 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 Gene3D G3DSA:2.40.110.10 120 235 2.7E-44 T 11-10-2018 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 4.2E-38 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 SUPERFAMILY SSF56645 1 242 3.14E-82 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 Gene3D G3DSA:1.10.540.10 1 119 3.3E-44 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 217 2.5E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 SUPERFAMILY SSF47203 228 378 4.51E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_24325 88df00cc888fcc4a601d7ccbb35797c7 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 3.3E-53 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_15790 2baa1f752ea5d6a4ee1472ce55924d5f 215 PIRSF PIRSF038973 1 213 1.6E-72 T 11-10-2018 IPR014196 Stage II sporulation protein M UP17_15790 2baa1f752ea5d6a4ee1472ce55924d5f 215 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 10 207 3.0E-73 T 11-10-2018 IPR014196 Stage II sporulation protein M UP17_15790 2baa1f752ea5d6a4ee1472ce55924d5f 215 Pfam PF01944 Stage II sporulation protein M 26 203 5.9E-26 T 11-10-2018 IPR002798 Stage II sporulation protein M-like UP17_24555 85a1f02e98282a39decd188b5893bba3 205 PIRSF PIRSF000709 5 157 2.2E-4 T 11-10-2018 UP17_24555 85a1f02e98282a39decd188b5893bba3 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 160 4.8E-31 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 UP17_24555 85a1f02e98282a39decd188b5893bba3 205 Gene3D G3DSA:3.40.50.1240 5 186 8.1E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_24555 85a1f02e98282a39decd188b5893bba3 205 SMART SM00855 6 153 3.1E-16 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 UP17_24555 85a1f02e98282a39decd188b5893bba3 205 SUPERFAMILY SSF53254 7 181 2.88E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_24820 2a006c7377029f84b010083181f87bac 187 SUPERFAMILY SSF55729 6 173 7.27E-51 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_24820 2a006c7377029f84b010083181f87bac 187 Pfam PF13523 Acetyltransferase (GNAT) domain 17 159 1.4E-48 T 11-10-2018 UP17_24820 2a006c7377029f84b010083181f87bac 187 SMART SM01006 12 59 6.4E-13 T 11-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain UP17_24820 2a006c7377029f84b010083181f87bac 187 Gene3D G3DSA:3.40.630.30 1 184 7.6E-58 T 11-10-2018 UP17_09920 e77452d6f2d7683c08af8a268d71bf5b 360 SUPERFAMILY SSF103501 58 280 3.4E-20 T 11-10-2018 IPR036197 NarG-like superfamily UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 1.6E-123 T 11-10-2018 IPR020823 Cell division protein FtsA UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Gene3D G3DSA:3.30.420.40 10 364 2.0E-109 T 11-10-2018 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Pfam PF14450 Cell division protein FtsA 205 366 1.8E-23 T 11-10-2018 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 PIRSF PIRSF003101 1 431 1.0E-141 T 11-10-2018 IPR020823 Cell division protein FtsA UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Gene3D G3DSA:3.30.420.40 195 349 2.0E-109 T 11-10-2018 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 SMART SM00842 7 194 4.7E-88 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 431 29.874 T 11-10-2018 IPR020823 Cell division protein FtsA UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Pfam PF02491 SHS2 domain inserted in FTSA 81 160 1.5E-24 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Gene3D G3DSA:3.30.1490.110 83 167 2.0E-109 T 11-10-2018 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 SUPERFAMILY SSF53067 6 195 3.16E-56 T 11-10-2018 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Pfam PF14450 Cell division protein FtsA 9 176 2.4E-8 T 11-10-2018 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 Gene3D G3DSA:3.90.640.10 233 298 2.0E-109 T 11-10-2018 UP17_07345 dbe1e6c7ea1c97ba478e2a1962889cc3 432 SUPERFAMILY SSF53067 197 368 1.7E-41 T 11-10-2018 UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 Gene3D G3DSA:3.40.630.10 106 396 4.9E-48 T 11-10-2018 UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 SMART SM00631 110 386 5.7E-13 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 Pfam PF00246 Zinc carboxypeptidase 121 383 6.2E-28 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 Gene3D G3DSA:3.10.350.10 2 46 1.8E-5 T 11-10-2018 IPR036779 LysM domain superfamily UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 Gene3D G3DSA:3.10.350.10 50 96 3.2E-14 T 11-10-2018 IPR036779 LysM domain superfamily UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 153 175 - T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 SMART SM00257 52 96 8.5E-14 T 11-10-2018 IPR018392 LysM domain UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 SMART SM00257 2 46 0.05 T 11-10-2018 IPR018392 LysM domain UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 Pfam PF01476 LysM domain 5 46 2.7E-4 T 11-10-2018 IPR018392 LysM domain UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 Pfam PF01476 LysM domain 53 96 2.2E-11 T 11-10-2018 IPR018392 LysM domain UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 SUPERFAMILY SSF53187 110 393 3.97E-50 T 11-10-2018 UP17_22615 ef01f23bb8955a7c64898bd447dce14f 397 SUPERFAMILY SSF54106 52 96 1.44E-9 T 11-10-2018 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 Pfam PF01197 Ribosomal protein L31 1 64 6.6E-31 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 26.751 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 SUPERFAMILY SSF143800 1 65 3.73E-25 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 7.1E-30 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 7.2E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.2E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 7.2E-21 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_24260 3866dc15178fd33a077c0f6aed0e31e2 66 Gene3D G3DSA:2.30.170.50 1 66 3.0E-31 T 11-10-2018 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 Pfam PF00551 Formyl transferase 94 270 1.1E-38 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 PIRSF PIRSF036480 7 289 1.2E-112 T 11-10-2018 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 SUPERFAMILY SSF55021 9 88 2.16E-14 T 11-10-2018 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 7 288 45.759 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 11 288 2.0E-119 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 Pfam PF01842 ACT domain 12 71 1.9E-8 T 11-10-2018 IPR002912 ACT domain UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 Gene3D G3DSA:3.30.70.260 5 93 5.6E-23 T 11-10-2018 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 SUPERFAMILY SSF53328 94 289 9.16E-59 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 Gene3D G3DSA:3.40.50.170 94 289 1.2E-71 T 11-10-2018 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 117 144 1.2E-59 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 95 117 1.2E-59 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 240 262 1.2E-59 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 262 287 1.2E-59 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 12 38 1.2E-59 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11905 8e278723e2001c1a327a0e5f494276f6 289 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 45 57 1.2E-59 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 UP17_11575 3e652b8d1979404b403a730e10e5b0b7 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 22.642 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 UP17_11575 3e652b8d1979404b403a730e10e5b0b7 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 4.9E-44 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 UP17_11575 3e652b8d1979404b403a730e10e5b0b7 108 SUPERFAMILY SSF103481 7 107 2.48E-11 T 11-10-2018 UP17_05790 68203ebb4cb90d050232c4302980b1af 511 SUPERFAMILY SSF51445 28 391 1.07E-78 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_05790 68203ebb4cb90d050232c4302980b1af 511 PIRSF PIRSF001024 1 480 3.7E-66 T 11-10-2018 IPR013777 Alpha-amylase-like GO:0004556|GO:0005509|GO:0005975 UP17_05790 68203ebb4cb90d050232c4302980b1af 511 SUPERFAMILY SSF51011 394 473 8.64E-10 T 11-10-2018 UP17_05790 68203ebb4cb90d050232c4302980b1af 511 Pfam PF00128 Alpha amylase, catalytic domain 66 357 1.3E-50 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_05790 68203ebb4cb90d050232c4302980b1af 511 SMART SM00642 38 385 3.4E-51 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_05790 68203ebb4cb90d050232c4302980b1af 511 Gene3D G3DSA:2.60.40.1180 390 485 4.2E-32 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta UP17_05790 68203ebb4cb90d050232c4302980b1af 511 Gene3D G3DSA:3.20.20.80 28 389 2.3E-116 T 11-10-2018 UP17_05580 ef6148b3b6f6e400e6139aff99d524f9 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 168 1.0E-46 T 11-10-2018 UP17_05580 ef6148b3b6f6e400e6139aff99d524f9 172 Pfam PF17099 Tryptophan transporter TrpP 2 164 4.3E-51 T 11-10-2018 IPR031360 Tryptophan transporter TrpP UP17_16460 549a93e7fe6136162d91853566c70224 69 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 58 1.4E-23 T 11-10-2018 IPR009256 Protein of unknown function DUF910 UP17_16460 549a93e7fe6136162d91853566c70224 69 Gene3D G3DSA:1.10.287.760 1 69 6.1E-25 T 11-10-2018 IPR023164 YqgQ-like superfamily UP17_16460 549a93e7fe6136162d91853566c70224 69 SUPERFAMILY SSF158379 1 61 1.01E-20 T 11-10-2018 IPR023164 YqgQ-like superfamily UP17_03845 8e8e5fbfb3471d92440971af820adcdb 212 SUPERFAMILY SSF51230 40 112 9.82E-10 T 11-10-2018 IPR011053 Single hybrid motif UP17_03845 8e8e5fbfb3471d92440971af820adcdb 212 Gene3D G3DSA:2.40.50.100 44 112 3.9E-11 T 11-10-2018 UP17_03845 8e8e5fbfb3471d92440971af820adcdb 212 Pfam PF13437 HlyD family secretion protein 86 202 3.3E-11 T 11-10-2018 UP17_03845 8e8e5fbfb3471d92440971af820adcdb 212 Gene3D G3DSA:2.40.30.170 113 211 6.0E-17 T 11-10-2018 UP17_25595 6af6757016bd46b8422acd9fb30187cd 192 Pfam PF04542 Sigma-70 region 2 22 89 1.9E-8 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_25595 6af6757016bd46b8422acd9fb30187cd 192 Gene3D G3DSA:1.10.10.10 103 182 1.7E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_25595 6af6757016bd46b8422acd9fb30187cd 192 Pfam PF08281 Sigma-70, region 4 127 173 3.6E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_25595 6af6757016bd46b8422acd9fb30187cd 192 SUPERFAMILY SSF88946 3 101 8.63E-21 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_25595 6af6757016bd46b8422acd9fb30187cd 192 Gene3D G3DSA:1.10.1740.10 2 102 5.9E-19 T 11-10-2018 UP17_25595 6af6757016bd46b8422acd9fb30187cd 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 176 1.6E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_25595 6af6757016bd46b8422acd9fb30187cd 192 SUPERFAMILY SSF88659 119 179 1.64E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_07570 5df22b9c88a3f97b319d0191f80f962d 556 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 556 1.6E-216 T 11-10-2018 IPR019986 DAK2 domain-containing protein YloV UP17_07570 5df22b9c88a3f97b319d0191f80f962d 556 SUPERFAMILY SSF101473 3 202 1.96E-47 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 UP17_07570 5df22b9c88a3f97b319d0191f80f962d 556 Gene3D G3DSA:1.25.40.340 4 179 3.9E-13 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 UP17_07570 5df22b9c88a3f97b319d0191f80f962d 556 Pfam PF13684 Dihydroxyacetone kinase family 241 556 1.3E-126 T 11-10-2018 IPR033470 Uncharacterised protein, DhaK domain UP17_07570 5df22b9c88a3f97b319d0191f80f962d 556 SMART SM01121 240 556 2.1E-184 T 11-10-2018 IPR033470 Uncharacterised protein, DhaK domain UP17_07570 5df22b9c88a3f97b319d0191f80f962d 556 Pfam PF02734 DAK2 domain 36 200 1.2E-43 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 UP17_07570 5df22b9c88a3f97b319d0191f80f962d 556 SMART SM01120 36 201 1.5E-73 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 UP17_24120 a71a6619f5a6fce0332582ffcbbb62ee 365 SUPERFAMILY SSF56762 16 364 4.19E-119 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24120 a71a6619f5a6fce0332582ffcbbb62ee 365 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 290 7.0E-68 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24120 a71a6619f5a6fce0332582ffcbbb62ee 365 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 291 364 4.1E-25 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24120 a71a6619f5a6fce0332582ffcbbb62ee 365 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 365 46.456 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24120 a71a6619f5a6fce0332582ffcbbb62ee 365 Gene3D G3DSA:1.10.645.20 4 365 5.0E-152 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 Gene3D G3DSA:2.40.50.140 283 337 7.7E-12 T 11-10-2018 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 Gene3D G3DSA:2.40.50.940 226 344 7.7E-12 T 11-10-2018 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 Pfam PF00005 ABC transporter 23 165 9.3E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 Pfam PF08402 TOBE domain 277 345 2.5E-8 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 SUPERFAMILY SSF52540 6 247 3.86E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 SUPERFAMILY SSF50331 240 345 5.95E-12 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 Gene3D G3DSA:3.40.50.300 6 225 5.8E-68 T 11-10-2018 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 38 311 6.9E-108 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_01120 b2e5780ea8401af763377bb5f49025cc 369 SMART SM00382 32 215 3.3E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_09655 d3cb97c0ca568696a03d675767dbcd67 452 Pfam PF13751 Transposase DDE domain 324 441 8.9E-29 T 11-10-2018 IPR025668 Transposase DDE domain UP17_09655 d3cb97c0ca568696a03d675767dbcd67 452 Pfam PF05598 Transposase domain (DUF772) 52 127 3.6E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_14030 d3cb97c0ca568696a03d675767dbcd67 452 Pfam PF13751 Transposase DDE domain 324 441 8.9E-29 T 11-10-2018 IPR025668 Transposase DDE domain UP17_14030 d3cb97c0ca568696a03d675767dbcd67 452 Pfam PF05598 Transposase domain (DUF772) 52 127 3.6E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_01690 00331ed8155dc86170a65a63314a1af1 128 Gene3D G3DSA:3.30.1330.40 1 126 3.5E-54 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_01690 00331ed8155dc86170a65a63314a1af1 128 Pfam PF01042 Endoribonuclease L-PSP 8 123 4.2E-46 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 UP17_01690 00331ed8155dc86170a65a63314a1af1 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 UP17_01690 00331ed8155dc86170a65a63314a1af1 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 1.2E-55 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 UP17_01690 00331ed8155dc86170a65a63314a1af1 128 SUPERFAMILY SSF55298 2 126 1.41E-49 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_09240 a32defd2fcae6a6bb7f3050181db7285 153 Gene3D G3DSA:3.40.630.30 4 150 2.4E-28 T 11-10-2018 UP17_09240 a32defd2fcae6a6bb7f3050181db7285 153 Pfam PF00583 Acetyltransferase (GNAT) family 22 142 1.1E-13 T 11-10-2018 IPR000182 GNAT domain UP17_09240 a32defd2fcae6a6bb7f3050181db7285 153 SUPERFAMILY SSF55729 8 148 2.62E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_00620 46258319008b975a0462577e09da753f 177 SMART SM00738 2 113 4.7E-54 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 UP17_00620 46258319008b975a0462577e09da753f 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.4E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 UP17_00620 46258319008b975a0462577e09da753f 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.4E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 UP17_00620 46258319008b975a0462577e09da753f 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.4E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 UP17_00620 46258319008b975a0462577e09da753f 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 28.902 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 UP17_00620 46258319008b975a0462577e09da753f 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site UP17_00620 46258319008b975a0462577e09da753f 177 Gene3D G3DSA:2.30.30.30 119 177 1.2E-25 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 UP17_00620 46258319008b975a0462577e09da753f 177 SUPERFAMILY SSF82679 2 114 3.14E-41 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 UP17_00620 46258319008b975a0462577e09da753f 177 Gene3D G3DSA:3.30.70.940 1 118 3.0E-45 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 UP17_00620 46258319008b975a0462577e09da753f 177 SUPERFAMILY SSF50104 121 177 3.01E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily UP17_00620 46258319008b975a0462577e09da753f 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 4.7E-66 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 UP17_00620 46258319008b975a0462577e09da753f 177 Pfam PF00467 KOW motif 127 158 3.6E-5 T 11-10-2018 IPR005824 KOW UP17_00620 46258319008b975a0462577e09da753f 177 SMART SM00739 123 150 5.1E-4 T 11-10-2018 IPR005824 KOW UP17_00620 46258319008b975a0462577e09da753f 177 Pfam PF02357 Transcription termination factor nusG 3 108 2.8E-28 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 UP17_17810 3864eea856cd813923695cec44c6afb3 203 Gene3D G3DSA:3.90.950.10 1 196 4.8E-77 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like UP17_17810 3864eea856cd813923695cec44c6afb3 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 1.1E-64 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 UP17_17810 3864eea856cd813923695cec44c6afb3 203 SUPERFAMILY SSF52972 1 193 1.15E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like UP17_17810 3864eea856cd813923695cec44c6afb3 203 Pfam PF01725 Ham1 family 4 190 7.2E-60 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 UP17_17810 3864eea856cd813923695cec44c6afb3 203 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 49.121 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 UP17_14480 515d2eca932df4934dad2fc33fc70cc4 304 ProSitePatterns PS00770 Aminotransferases class-IV signature. 185 214 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 UP17_14480 515d2eca932df4934dad2fc33fc70cc4 304 Gene3D G3DSA:3.20.10.10 125 302 9.1E-50 T 11-10-2018 UP17_14480 515d2eca932df4934dad2fc33fc70cc4 304 Gene3D G3DSA:3.30.470.10 2 124 1.3E-41 T 11-10-2018 UP17_14480 515d2eca932df4934dad2fc33fc70cc4 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 6 282 6.6E-82 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 UP17_14480 515d2eca932df4934dad2fc33fc70cc4 304 SUPERFAMILY SSF56752 3 283 6.67E-85 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 UP17_14480 515d2eca932df4934dad2fc33fc70cc4 304 Pfam PF01063 Amino-transferase class IV 31 259 1.5E-59 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 UP17_08300 04ef9daf15b388b13b648369f52fce09 243 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 2 237 37.578 T 11-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 UP17_08300 04ef9daf15b388b13b648369f52fce09 243 Gene3D G3DSA:3.20.20.370 2 233 6.7E-75 T 11-10-2018 UP17_08300 04ef9daf15b388b13b648369f52fce09 243 SUPERFAMILY SSF88713 2 229 1.11E-65 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_08300 04ef9daf15b388b13b648369f52fce09 243 Pfam PF04794 YdjC-like protein 4 229 2.6E-55 T 11-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like UP17_13835 d7a0952048b78ba89174bdf2e4452386 345 Pfam PF03845 Spore germination protein 16 304 1.9E-31 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_10490 40d8b01adca0f2325b5fd3d40ec6f109 249 Gene3D G3DSA:1.10.10.10 1 72 8.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10490 40d8b01adca0f2325b5fd3d40ec6f109 249 SUPERFAMILY SSF55781 59 246 1.24E-36 T 11-10-2018 UP17_10490 40d8b01adca0f2325b5fd3d40ec6f109 249 SMART SM00346 2 91 2.8E-12 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_10490 40d8b01adca0f2325b5fd3d40ec6f109 249 SUPERFAMILY SSF46785 2 73 4.55E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10490 40d8b01adca0f2325b5fd3d40ec6f109 249 Pfam PF01614 Bacterial transcriptional regulator 122 241 1.4E-24 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal UP17_10490 40d8b01adca0f2325b5fd3d40ec6f109 249 Pfam PF09339 IclR helix-turn-helix domain 4 51 1.7E-9 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_10490 40d8b01adca0f2325b5fd3d40ec6f109 249 Gene3D G3DSA:3.30.450.40 73 248 9.2E-41 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_16025 85f45fb3b461100a862bf59050f9ba0d 78 Pfam PF11118 Protein of unknown function (DUF2627) 2 77 3.9E-35 T 11-10-2018 IPR020138 Uncharacterised protein family YqzF UP17_16025 85f45fb3b461100a862bf59050f9ba0d 78 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 1.0E-14 T 11-10-2018 IPR020138 Uncharacterised protein family YqzF UP17_15455 e3d58854774d4083a8d294f139e75777 701 Gene3D G3DSA:3.30.450.20 232 369 5.3E-11 T 11-10-2018 UP17_15455 e3d58854774d4083a8d294f139e75777 701 SMART SM00091 245 313 34.0 T 11-10-2018 IPR000014 PAS domain UP17_15455 e3d58854774d4083a8d294f139e75777 701 SMART SM00091 127 193 0.059 T 11-10-2018 IPR000014 PAS domain UP17_15455 e3d58854774d4083a8d294f139e75777 701 Pfam PF13426 PAS domain 258 353 0.014 T 11-10-2018 IPR000014 PAS domain UP17_15455 e3d58854774d4083a8d294f139e75777 701 Pfam PF13426 PAS domain 137 227 2.2E-6 T 11-10-2018 IPR000014 PAS domain UP17_15455 e3d58854774d4083a8d294f139e75777 701 SMART SM00382 401 545 3.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_15455 e3d58854774d4083a8d294f139e75777 701 Gene3D G3DSA:3.30.450.20 129 231 1.6E-11 T 11-10-2018 UP17_15455 e3d58854774d4083a8d294f139e75777 701 SUPERFAMILY SSF55785 122 224 2.44E-7 T 11-10-2018 IPR035965 PAS domain superfamily UP17_15455 e3d58854774d4083a8d294f139e75777 701 Gene3D G3DSA:1.10.10.60 630 691 4.8E-5 T 11-10-2018 UP17_15455 e3d58854774d4083a8d294f139e75777 701 Pfam PF00158 Sigma-54 interaction domain 382 549 7.1E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_15455 e3d58854774d4083a8d294f139e75777 701 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_15455 e3d58854774d4083a8d294f139e75777 701 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_15455 e3d58854774d4083a8d294f139e75777 701 Gene3D G3DSA:3.40.50.300 370 552 7.7E-64 T 11-10-2018 UP17_15455 e3d58854774d4083a8d294f139e75777 701 SUPERFAMILY SSF52540 381 624 2.48E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15455 e3d58854774d4083a8d294f139e75777 701 Gene3D G3DSA:1.10.8.60 553 619 1.9E-24 T 11-10-2018 UP17_15455 e3d58854774d4083a8d294f139e75777 701 SUPERFAMILY SSF46689 594 687 8.96E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_16525 6df637cf0842c591c12bbd0a232f20dd 320 Pfam PF12849 PBP superfamily domain 37 288 4.0E-33 T 11-10-2018 IPR024370 PBP domain UP17_16525 6df637cf0842c591c12bbd0a232f20dd 320 Gene3D G3DSA:3.40.190.10 124 264 2.5E-90 T 11-10-2018 UP17_16525 6df637cf0842c591c12bbd0a232f20dd 320 SUPERFAMILY SSF53850 43 316 1.14E-75 T 11-10-2018 UP17_16525 6df637cf0842c591c12bbd0a232f20dd 320 Gene3D G3DSA:3.40.190.10 46 301 2.5E-90 T 11-10-2018 UP17_16525 6df637cf0842c591c12bbd0a232f20dd 320 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 302 7.1E-91 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 UP17_00865 cbc34df44cb7d5d4da7c472a81d6662b 141 Pfam PF10730 Protein of unknown function (DUF2521) 1 141 2.8E-48 T 11-10-2018 IPR019667 Uncharacterised protein family YbaK UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 Gene3D G3DSA:3.40.30.10 1 104 3.3E-34 T 11-10-2018 UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 PRINTS PR00421 Thioredoxin family signature 28 37 4.8E-9 T 11-10-2018 UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 PRINTS PR00421 Thioredoxin family signature 20 28 4.8E-9 T 11-10-2018 UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 PRINTS PR00421 Thioredoxin family signature 68 79 4.8E-9 T 11-10-2018 UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 Pfam PF00085 Thioredoxin 3 103 1.8E-31 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 PIRSF PIRSF000077 1 104 3.8E-41 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 SUPERFAMILY SSF52833 3 103 5.21E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_09360 4b65ec6c20de28053c18f1f12ba8912b 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 9.9E-38 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 UP17_00250 958967498dd76c6a71892e602fc3c320 292 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 288 55.26 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 UP17_00250 958967498dd76c6a71892e602fc3c320 292 Gene3D G3DSA:3.40.50.150 2 216 2.3E-73 T 11-10-2018 UP17_00250 958967498dd76c6a71892e602fc3c320 292 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 276 1.5E-74 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm UP17_00250 958967498dd76c6a71892e602fc3c320 292 SUPERFAMILY SSF53335 16 288 1.1E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_00250 958967498dd76c6a71892e602fc3c320 292 SMART SM00650 36 212 3.3E-84 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 UP17_00250 958967498dd76c6a71892e602fc3c320 292 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 UP17_00250 958967498dd76c6a71892e602fc3c320 292 Gene3D G3DSA:1.10.8.100 220 289 2.5E-18 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 UP17_00250 958967498dd76c6a71892e602fc3c320 292 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 286 2.6E-84 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 PIRSF PIRSF016578 1 380 6.8E-33 T 11-10-2018 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 215 2.4E-13 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 Gene3D G3DSA:1.10.540.10 5 119 6.1E-16 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 Gene3D G3DSA:1.20.140.10 234 379 4.0E-30 T 11-10-2018 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 360 6.2E-17 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 93 7.2E-6 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 Gene3D G3DSA:2.40.110.10 133 223 1.7E-19 T 11-10-2018 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 SUPERFAMILY SSF56645 25 224 5.63E-36 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_11825 dce5a5f869728f93d7ff2ab84bc367a8 380 SUPERFAMILY SSF47203 238 378 2.26E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 SMART SM00363 354 415 9.8E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 1.9E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 1.9E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 1.9E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 1.9E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 SUPERFAMILY SSF52374 2 323 2.89E-108 T 11-10-2018 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 Pfam PF01479 S4 domain 355 396 1.0E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 Gene3D G3DSA:3.10.290.10 326 418 8.5E-34 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 417 3.6E-134 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 Gene3D G3DSA:1.10.240.10 223 325 2.1E-38 T 11-10-2018 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 Gene3D G3DSA:3.40.50.620 1 222 3.0E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 SUPERFAMILY SSF55174 321 417 1.06E-23 T 11-10-2018 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 Pfam PF00579 tRNA synthetases class I (W and Y) 28 323 2.3E-82 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_18430 1ec0a7b03401f35cdca512d9a53378dd 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 44.255 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 Gene3D G3DSA:3.40.50.720 123 265 1.4E-93 T 11-10-2018 UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 Pfam PF00107 Zinc-binding dehydrogenase 151 259 2.1E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 SUPERFAMILY SSF51735 112 273 6.37E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 Gene3D G3DSA:3.90.180.10 10 315 1.4E-93 T 11-10-2018 UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 SUPERFAMILY SSF50129 1 144 1.35E-34 T 11-10-2018 IPR011032 GroES-like superfamily UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 SMART SM00829 10 319 2.1E-23 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_20705 59f836ca863ba9cf99bb272f20ee3454 321 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 2.6E-10 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_23385 4148830a6d02294c108c076be424dbad 290 Pfam PF03466 LysR substrate binding domain 87 283 1.5E-33 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_23385 4148830a6d02294c108c076be424dbad 290 Gene3D G3DSA:1.10.10.10 1 82 1.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_23385 4148830a6d02294c108c076be424dbad 290 SUPERFAMILY SSF46785 1 110 1.47E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_23385 4148830a6d02294c108c076be424dbad 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_23385 4148830a6d02294c108c076be424dbad 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_23385 4148830a6d02294c108c076be424dbad 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_23385 4148830a6d02294c108c076be424dbad 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_23385 4148830a6d02294c108c076be424dbad 290 Gene3D G3DSA:3.40.190.290 83 284 3.9E-74 T 11-10-2018 UP17_23385 4148830a6d02294c108c076be424dbad 290 SUPERFAMILY SSF53850 87 284 2.85E-30 T 11-10-2018 UP17_07425 93ac1afbd19bf22bc257bd11f2c33813 429 Pfam PF00860 Permease family 19 392 6.1E-106 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 UP17_07425 93ac1afbd19bf22bc257bd11f2c33813 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 415 1.2E-131 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 UP17_07425 93ac1afbd19bf22bc257bd11f2c33813 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 338 358 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 UP17_02815 08ff40f7e5978520c37dbe93462801b0 172 Pfam PF07308 Protein of unknown function (DUF1456) 105 172 1.3E-22 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 UP17_02815 08ff40f7e5978520c37dbe93462801b0 172 Pfam PF07308 Protein of unknown function (DUF1456) 3 82 1.0E-26 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 UP17_01805 5587b2761140a6da6148b12178ae843b 575 Gene3D G3DSA:1.10.3720.10 83 273 3.5E-34 T 11-10-2018 IPR035906 MetI-like superfamily UP17_01805 5587b2761140a6da6148b12178ae843b 575 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 475 575 3.0E-20 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 UP17_01805 5587b2761140a6da6148b12178ae843b 575 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 314 456 3.5E-41 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 UP17_01805 5587b2761140a6da6148b12178ae843b 575 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 264 1.2E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_01805 5587b2761140a6da6148b12178ae843b 575 Gene3D G3DSA:3.40.190.230 318 574 8.4E-121 T 11-10-2018 UP17_01805 5587b2761140a6da6148b12178ae843b 575 SUPERFAMILY SSF53850 317 469 1.13E-47 T 11-10-2018 UP17_01805 5587b2761140a6da6148b12178ae843b 575 SUPERFAMILY SSF161098 84 268 1.19E-38 T 11-10-2018 IPR035906 MetI-like superfamily UP17_01805 5587b2761140a6da6148b12178ae843b 575 SUPERFAMILY SSF53850 471 575 4.58E-27 T 11-10-2018 UP17_01805 5587b2761140a6da6148b12178ae843b 575 Gene3D G3DSA:3.10.105.10 400 556 8.4E-121 T 11-10-2018 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 93 193 2.1E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 66 199 1.0E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 225 1.1E-65 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 2.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 2.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 2.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.8E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 SUPERFAMILY SSF56784 2 227 9.39E-46 T 11-10-2018 IPR036412 HAD-like superfamily UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 Gene3D G3DSA:3.40.50.1000 5 222 3.6E-69 T 11-10-2018 IPR023214 HAD superfamily UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 198 1.3E-20 T 11-10-2018 UP17_04270 1555dd878826913eeb9464fb0e9e0208 231 Gene3D G3DSA:1.10.150.240 16 100 3.6E-69 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 UP17_15985 02aeef7d876e26b900e4b497823751c4 625 Pfam PF01642 Methylmalonyl-CoA mutase 39 526 1.3E-116 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_15985 02aeef7d876e26b900e4b497823751c4 625 SUPERFAMILY SSF52242 467 624 1.1E-25 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_15985 02aeef7d876e26b900e4b497823751c4 625 Gene3D G3DSA:3.40.50.280 489 625 2.4E-25 T 11-10-2018 UP17_15985 02aeef7d876e26b900e4b497823751c4 625 Gene3D G3DSA:3.20.20.240 36 465 3.5E-134 T 11-10-2018 UP17_15985 02aeef7d876e26b900e4b497823751c4 625 SUPERFAMILY SSF51703 10 520 4.71E-118 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 Gene3D G3DSA:3.40.50.2300 398 484 4.0E-6 T 11-10-2018 UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 SUPERFAMILY SSF52794 398 482 4.55E-5 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 SUPERFAMILY SSF63520 268 391 2.09E-20 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 Gene3D G3DSA:1.10.1790.10 289 388 3.9E-13 T 11-10-2018 UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 SUPERFAMILY SSF55804 537 680 8.37E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 541 679 8.3E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 Pfam PF00874 PRD domain 297 386 4.7E-18 T 11-10-2018 IPR011608 PRD domain GO:0006355 UP17_20480 2a54ca1286213d3d0b4eaa76aeb67676 687 Gene3D G3DSA:3.40.930.10 535 686 1.1E-52 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_17620 ef751f3f2caa515b863d1be882bf586f 284 Gene3D G3DSA:3.40.50.20 25 114 9.3E-9 T 11-10-2018 UP17_17620 ef751f3f2caa515b863d1be882bf586f 284 SUPERFAMILY SSF56059 90 268 7.63E-30 T 11-10-2018 UP17_17620 ef751f3f2caa515b863d1be882bf586f 284 Gene3D G3DSA:3.30.470.80 172 283 1.1E-21 T 11-10-2018 UP17_17620 ef751f3f2caa515b863d1be882bf586f 284 Pfam PF08443 RimK-like ATP-grasp domain 98 267 3.0E-14 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 UP17_23125 e6d4f78c32c4b44c534a7be9cfdb89a0 465 SUPERFAMILY SSF101960 32 462 7.98E-139 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily UP17_23125 e6d4f78c32c4b44c534a7be9cfdb89a0 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 9.6E-231 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 UP17_23125 e6d4f78c32c4b44c534a7be9cfdb89a0 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 1.6E-74 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 UP17_07880 45fbc1c8dd220d3c20ae15cb6e353fa9 288 Gene3D G3DSA:3.40.50.300 21 263 6.2E-56 T 11-10-2018 UP17_07880 45fbc1c8dd220d3c20ae15cb6e353fa9 288 SUPERFAMILY SSF52540 20 264 4.71E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07880 45fbc1c8dd220d3c20ae15cb6e353fa9 288 PIRSF PIRSF003092 1 288 2.0E-80 T 11-10-2018 IPR025501 ATP binding protein MinD UP17_07880 45fbc1c8dd220d3c20ae15cb6e353fa9 288 Pfam PF13614 AAA domain 22 184 5.8E-18 T 11-10-2018 IPR025669 AAA domain UP17_25325 6ef994b6141f1b550c8d589acf8cb8bb 722 SMART SM00382 382 595 5.3E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_25325 6ef994b6141f1b550c8d589acf8cb8bb 722 SUPERFAMILY SSF52540 383 616 9.94E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_25325 6ef994b6141f1b550c8d589acf8cb8bb 722 Pfam PF07728 AAA domain (dynein-related subfamily) 390 585 4.2E-15 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 7.1E-14 T 11-10-2018 UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 9.1E-21 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 SUPERFAMILY SSF54909 63 147 1.34E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 SMART SM00344 1 108 1.3E-30 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 SUPERFAMILY SSF46785 1 60 4.68E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 Gene3D G3DSA:3.30.70.920 54 136 3.6E-25 T 11-10-2018 UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_11480 6c6e6b6c1748b65c155aed3a620e0f49 163 Gene3D G3DSA:1.10.10.10 1 48 1.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 SUPERFAMILY SSF143597 18 143 4.97E-29 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 9 354 41.735 T 11-10-2018 IPR023763 DNA integrity scanning protein, DisA UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 Gene3D G3DSA:1.20.1260.110 144 287 7.0E-39 T 11-10-2018 IPR038331 DisA, linker domain superfamily UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 26 137 2.7E-27 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 Gene3D G3DSA:3.40.1700.10 8 143 1.2E-55 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 Pfam PF10635 DisA bacterial checkpoint controller linker region 143 278 1.7E-44 T 11-10-2018 IPR018906 DNA integrity scanning, DisA, linker region UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 SUPERFAMILY SSF47781 282 347 2.0E-11 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_00555 2b355cb333d7b8db2266f086fc368c0b 357 Gene3D G3DSA:1.10.150.20 290 354 5.3E-24 T 11-10-2018 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 PIRSF PIRSF016578 5 378 2.7E-14 T 11-10-2018 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 Gene3D G3DSA:1.10.540.10 1 119 6.9E-44 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 SUPERFAMILY SSF56645 1 242 2.23E-93 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 SUPERFAMILY SSF47203 228 379 1.27E-61 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 4.8E-52 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 6.6E-40 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 Gene3D G3DSA:2.40.110.10 121 234 3.5E-47 T 11-10-2018 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.3E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_10215 976ebdfa8d786edd2248fc4ab981bc6b 380 Gene3D G3DSA:1.20.140.10 235 380 5.4E-57 T 11-10-2018 UP17_06805 deb06364cf6ab65677031f75f99b0782 290 Gene3D G3DSA:1.10.1040.10 167 290 5.9E-39 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_06805 deb06364cf6ab65677031f75f99b0782 290 PIRSF PIRSF000103 2 290 2.2E-74 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 UP17_06805 deb06364cf6ab65677031f75f99b0782 290 Gene3D G3DSA:3.40.50.720 2 166 1.1E-54 T 11-10-2018 UP17_06805 deb06364cf6ab65677031f75f99b0782 290 SUPERFAMILY SSF48179 167 289 8.05E-38 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_06805 deb06364cf6ab65677031f75f99b0782 290 SUPERFAMILY SSF51735 8 167 1.42E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06805 deb06364cf6ab65677031f75f99b0782 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 10 23 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 UP17_06805 deb06364cf6ab65677031f75f99b0782 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 165 2.3E-52 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 UP17_06805 deb06364cf6ab65677031f75f99b0782 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 169 289 3.2E-35 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 UP17_05620 237764e917c8bfd3befba8ad66afbb74 171 Gene3D G3DSA:3.30.70.3430 1 167 3.2E-66 T 11-10-2018 UP17_05620 237764e917c8bfd3befba8ad66afbb74 171 Pfam PF03992 Antibiotic biosynthesis monooxygenase 66 139 1.4E-12 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain UP17_05620 237764e917c8bfd3befba8ad66afbb74 171 SUPERFAMILY SSF54909 65 158 6.6E-22 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_08495 cf8df83ce600c343e6bf624a5b28c948 226 SUPERFAMILY SSF52172 4 179 3.08E-41 T 11-10-2018 IPR011006 CheY-like superfamily UP17_08495 cf8df83ce600c343e6bf624a5b28c948 226 SMART SM00862 148 223 2.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_08495 cf8df83ce600c343e6bf624a5b28c948 226 Gene3D G3DSA:3.40.50.2300 1 130 4.1E-38 T 11-10-2018 UP17_08495 cf8df83ce600c343e6bf624a5b28c948 226 Pfam PF00072 Response regulator receiver domain 5 113 2.9E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_08495 cf8df83ce600c343e6bf624a5b28c948 226 Gene3D G3DSA:1.10.10.10 131 226 3.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08495 cf8df83ce600c343e6bf624a5b28c948 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 3.9E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_08495 cf8df83ce600c343e6bf624a5b28c948 226 SMART SM00448 3 112 2.6E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 SUPERFAMILY SSF69065 16 175 3.14E-54 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 SMART SM00535 32 167 8.4E-62 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 SUPERFAMILY SSF54768 129 240 5.81E-26 T 11-10-2018 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 Hamap MF_00104 Ribonuclease 3 [rnc]. 20 236 31.682 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 Gene3D G3DSA:1.10.1520.10 12 166 1.1E-50 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 Pfam PF00035 Double-stranded RNA binding motif 173 239 7.8E-17 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain UP17_07615 e909ba847f8aeb92b57987deb1994299 246 Pfam PF14622 Ribonuclease-III-like 30 160 5.5E-38 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 SMART SM00358 173 240 2.2E-20 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain UP17_07615 e909ba847f8aeb92b57987deb1994299 246 Gene3D G3DSA:3.30.160.20 167 244 1.6E-22 T 11-10-2018 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 20 236 2.2E-79 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 UP17_07615 e909ba847f8aeb92b57987deb1994299 246 ProSitePatterns PS00517 Ribonuclease III family signature. 56 64 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 UP17_05485 3c8cef1c28ca3369db75bff0b6ca8ff7 62 Pfam PF14120 YhzD-like protein 4 62 1.8E-29 T 11-10-2018 IPR025544 YhzD-like protein UP17_02700 0a89aff48e8ef17a82c67975e9c38ad9 250 Pfam PF00691 OmpA family 137 237 9.6E-13 T 11-10-2018 IPR006665 OmpA-like domain UP17_02700 0a89aff48e8ef17a82c67975e9c38ad9 250 Gene3D G3DSA:3.30.1330.60 85 250 2.6E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily UP17_02700 0a89aff48e8ef17a82c67975e9c38ad9 250 SUPERFAMILY SSF103088 124 245 2.62E-25 T 11-10-2018 IPR036737 OmpA-like domain superfamily UP17_02700 0a89aff48e8ef17a82c67975e9c38ad9 250 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 58 1.3E-19 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 757 33.958 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 313 2.8E-117 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 SUPERFAMILY SSF51726 396 756 6.93E-109 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 752 2.4E-147 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 756 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 Gene3D G3DSA:3.20.20.210 5 523 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 SUPERFAMILY SSF51726 4 390 3.4E-96 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 Gene3D G3DSA:3.20.20.210 388 755 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_03895 c94721434a8c2430e2aade43a69ee3b3 766 PIRSF PIRSF000382 1 761 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 323 338 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 344 353 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 295 322 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 134 150 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 88 99 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 353 364 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 151 166 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 197 219 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00359 B-class P450 signature 278 289 1.5E-55 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 Gene3D G3DSA:1.10.630.10 1 405 1.3E-125 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 SUPERFAMILY SSF48264 30 405 3.27E-101 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00385 P450 superfamily signature 243 260 2.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00385 P450 superfamily signature 353 364 2.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00385 P450 superfamily signature 278 289 2.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 PRINTS PR00385 P450 superfamily signature 344 353 2.6E-7 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 Pfam PF00067 Cytochrome P450 55 403 7.7E-39 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_09030 b3876b4f9de063c7361afdaf95284ef8 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 346 355 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 UP17_05785 fc8d7c635565a1aed2332671d0b401ce 415 Pfam PF13416 Bacterial extracellular solute-binding protein 65 361 9.4E-38 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein UP17_05785 fc8d7c635565a1aed2332671d0b401ce 415 Gene3D G3DSA:3.40.190.10 160 407 7.1E-93 T 11-10-2018 UP17_05785 fc8d7c635565a1aed2332671d0b401ce 415 SUPERFAMILY SSF53850 53 411 3.36E-73 T 11-10-2018 UP17_05785 fc8d7c635565a1aed2332671d0b401ce 415 Gene3D G3DSA:3.40.190.10 60 374 7.1E-93 T 11-10-2018 UP17_16115 533dedcfcab4e0315f72440170e06216 197 Pfam PF12685 SpoIIIAH-like protein 6 191 3.9E-31 T 11-10-2018 IPR024232 Stage III sporulation protein AH-like UP17_16115 533dedcfcab4e0315f72440170e06216 197 Gene3D G3DSA:3.30.300.270 82 197 1.1E-31 T 11-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 PIRSF PIRSF000850 20 182 0.0024 T 11-10-2018 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 PIRSF PIRSF000850 304 371 2.2 T 11-10-2018 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 PIRSF PIRSF000850 221 297 1.0E-6 T 11-10-2018 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 SUPERFAMILY SSF56024 36 217 2.35E-42 T 11-10-2018 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 32 397 4.8E-99 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 Pfam PF13091 PLD-like domain 238 361 9.7E-25 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 Pfam PF13091 PLD-like domain 57 198 7.5E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 Gene3D G3DSA:3.30.870.10 35 223 9.8E-45 T 11-10-2018 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 SMART SM00155 310 337 5.8E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 SMART SM00155 138 165 2.3E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 Gene3D G3DSA:3.30.870.10 224 371 2.0E-24 T 11-10-2018 UP17_24345 9185956c6ae997b4df69f8117e2bf57e 397 SUPERFAMILY SSF56024 190 374 3.81E-38 T 11-10-2018 UP17_14585 f2af0edf026f28ce38216752698ddec2 486 SUPERFAMILY SSF53720 6 485 6.28E-153 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_14585 f2af0edf026f28ce38216752698ddec2 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_14585 f2af0edf026f28ce38216752698ddec2 486 Gene3D G3DSA:3.40.309.10 255 455 3.8E-157 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_14585 f2af0edf026f28ce38216752698ddec2 486 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 4 486 72.611 T 11-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 UP17_14585 f2af0edf026f28ce38216752698ddec2 486 Pfam PF00171 Aldehyde dehydrogenase family 18 480 2.6E-153 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_14585 f2af0edf026f28ce38216752698ddec2 486 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 11 486 4.0E-182 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 UP17_14585 f2af0edf026f28ce38216752698ddec2 486 Gene3D G3DSA:3.40.605.10 26 463 3.8E-157 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_05835 2900d7f23aae3ee19e333e5f427736be 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 263 1.3E-58 T 11-10-2018 IPR000150 Cof family GO:0016787 UP17_05835 2900d7f23aae3ee19e333e5f427736be 271 Gene3D G3DSA:3.40.50.1000 7 262 9.6E-63 T 11-10-2018 IPR023214 HAD superfamily UP17_05835 2900d7f23aae3ee19e333e5f427736be 271 Gene3D G3DSA:3.30.1240.10 86 192 9.6E-63 T 11-10-2018 UP17_05835 2900d7f23aae3ee19e333e5f427736be 271 SUPERFAMILY SSF56784 2 267 2.11E-67 T 11-10-2018 IPR036412 HAD-like superfamily UP17_05835 2900d7f23aae3ee19e333e5f427736be 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 3.5E-25 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_05835 2900d7f23aae3ee19e333e5f427736be 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 11-10-2018 UP17_05835 2900d7f23aae3ee19e333e5f427736be 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 263 1.3E-63 T 11-10-2018 UP17_13965 2909daf0478cb95f240f87f9b80af718 122 Gene3D G3DSA:3.10.180.10 9 120 1.7E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_13965 2909daf0478cb95f240f87f9b80af718 122 SUPERFAMILY SSF54593 8 121 2.11E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 48.644 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PIRSF PIRSF000532 1 318 3.0E-123 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 Pfam PF00365 Phosphofructokinase 3 275 1.0E-113 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 Gene3D G3DSA:3.40.50.450 3 279 1.7E-119 T 11-10-2018 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 4.9E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 SUPERFAMILY SSF53784 1 312 6.67E-118 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 Gene3D G3DSA:3.40.50.460 142 251 1.7E-119 T 11-10-2018 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 3.4E-137 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 UP17_18195 1b53bf5194bac14987872f7f8c9178f1 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 Pfam PF06418 CTP synthase N-terminus 3 267 1.3E-129 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 Pfam PF00117 Glutamine amidotransferase class-I 302 525 3.8E-59 T 11-10-2018 IPR017926 Glutamine amidotransferase UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 Gene3D G3DSA:3.40.50.300 1 286 4.9E-135 T 11-10-2018 UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 52.52 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 525 1.3E-262 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 SUPERFAMILY SSF52540 1 269 1.96E-126 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 Gene3D G3DSA:3.40.50.880 288 535 3.5E-102 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_24300 8e2939a8e54d48e379407d17b99b6338 535 SUPERFAMILY SSF52317 289 530 7.59E-84 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_12035 056e46e06380fc63f062fc2d30b42b4b 313 Pfam PF02625 XdhC and CoxI family 14 74 3.9E-13 T 11-10-2018 IPR003777 XdhC- CoxI UP17_12035 056e46e06380fc63f062fc2d30b42b4b 313 Pfam PF13478 XdhC Rossmann domain 168 302 2.0E-29 T 11-10-2018 IPR027051 XdhC Rossmann domain UP17_12035 056e46e06380fc63f062fc2d30b42b4b 313 Gene3D G3DSA:3.40.50.720 167 313 1.2E-48 T 11-10-2018 UP17_01125 d8304c983fe4044fd1437f3287e510c9 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 259 1.7E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_01125 d8304c983fe4044fd1437f3287e510c9 267 SUPERFAMILY SSF161098 5 259 1.21E-47 T 11-10-2018 IPR035906 MetI-like superfamily UP17_01125 d8304c983fe4044fd1437f3287e510c9 267 Gene3D G3DSA:1.10.3720.10 6 265 3.3E-44 T 11-10-2018 IPR035906 MetI-like superfamily UP17_13275 b8663174032f6b5c097696ad85d7d997 493 Pfam PF00171 Aldehyde dehydrogenase family 29 488 6.2E-190 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_13275 b8663174032f6b5c097696ad85d7d997 493 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_13275 b8663174032f6b5c097696ad85d7d997 493 Gene3D G3DSA:3.40.605.10 23 486 4.7E-201 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_13275 b8663174032f6b5c097696ad85d7d997 493 Gene3D G3DSA:3.40.309.10 269 458 4.7E-201 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_13275 b8663174032f6b5c097696ad85d7d997 493 SUPERFAMILY SSF53720 15 491 4.97E-182 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 Gene3D G3DSA:1.10.10.60 55 108 2.0E-12 T 11-10-2018 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 SUPERFAMILY SSF46689 57 116 2.51E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 Pfam PF06445 GyrI-like small molecule binding domain 128 287 5.2E-28 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 SMART SM00342 21 104 1.4E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 Gene3D G3DSA:1.10.10.60 4 54 6.3E-14 T 11-10-2018 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 Gene3D G3DSA:3.20.80.10 128 290 2.6E-39 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 SUPERFAMILY SSF46689 7 55 1.93E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 SUPERFAMILY SSF55136 128 290 1.31E-29 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 Pfam PF12833 Helix-turn-helix domain 28 105 3.0E-16 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 SMART SM00871 128 288 8.0E-33 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 8.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_25260 c2a081c9cd008a3cce6a70b265c247b5 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 8.4E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_18170 01b1097babe87e6776126106d4496ef5 375 Pfam PF01594 AI-2E family transporter 19 353 4.3E-61 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like UP17_18170 01b1097babe87e6776126106d4496ef5 375 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 359 1.6E-107 T 11-10-2018 IPR014227 Putative transport protein YtvI-like UP17_25535 8b82cdd23a4f08153958d5d7d6385429 438 Pfam PF01554 MatE 12 172 5.0E-23 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_25535 8b82cdd23a4f08153958d5d7d6385429 438 Pfam PF01554 MatE 241 394 1.0E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_25535 8b82cdd23a4f08153958d5d7d6385429 438 TIGRFAM TIGR00797 matE: MATE efflux family protein 12 406 2.9E-76 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 5.9E-37 T 11-10-2018 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 5.9E-37 T 11-10-2018 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 5.9E-37 T 11-10-2018 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 5.9E-37 T 11-10-2018 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 5.9E-37 T 11-10-2018 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 5.9E-37 T 11-10-2018 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 5.9E-37 T 11-10-2018 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 SUPERFAMILY SSF118215 6 401 2.35E-125 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 Pfam PF00375 Sodium:dicarboxylate symporter family 6 400 6.5E-123 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 296 319 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 Gene3D G3DSA:1.10.3860.10 1 419 2.3E-133 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_20145 1e3a9458dc6e61ab3ac14cf8a06aa186 423 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site UP17_23145 5da8ca45274417d0d705f2e141ee47ab 261 SMART SM00382 30 225 3.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_23145 5da8ca45274417d0d705f2e141ee47ab 261 Gene3D G3DSA:3.40.50.300 3 253 9.0E-57 T 11-10-2018 UP17_23145 5da8ca45274417d0d705f2e141ee47ab 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23145 5da8ca45274417d0d705f2e141ee47ab 261 SUPERFAMILY SSF52540 6 233 1.13E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23145 5da8ca45274417d0d705f2e141ee47ab 261 Pfam PF00005 ABC transporter 21 173 7.0E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_23145 5da8ca45274417d0d705f2e141ee47ab 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 9.2E-115 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 UP17_25095 a30b60c9f4b47aa6b10491297c9494d5 190 SUPERFAMILY SSF48498 79 188 3.76E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_25095 a30b60c9f4b47aa6b10491297c9494d5 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 1.9E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_25095 a30b60c9f4b47aa6b10491297c9494d5 190 SUPERFAMILY SSF46689 2 80 1.7E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_25095 a30b60c9f4b47aa6b10491297c9494d5 190 Gene3D G3DSA:1.10.357.10 1 190 4.9E-51 T 11-10-2018 UP17_25095 a30b60c9f4b47aa6b10491297c9494d5 190 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 67 188 6.8E-7 T 11-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal UP17_25095 a30b60c9f4b47aa6b10491297c9494d5 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_25095 a30b60c9f4b47aa6b10491297c9494d5 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.2E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_02225 7dedeb295256f609d2dfda254838c621 382 Gene3D G3DSA:3.40.50.1970 2 182 1.0E-53 T 11-10-2018 UP17_02225 7dedeb295256f609d2dfda254838c621 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 374 7.1E-115 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 UP17_02225 7dedeb295256f609d2dfda254838c621 382 SUPERFAMILY SSF56796 6 380 2.09E-116 T 11-10-2018 UP17_02225 7dedeb295256f609d2dfda254838c621 382 Gene3D G3DSA:1.20.1090.10 185 382 2.7E-64 T 11-10-2018 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 SUPERFAMILY SSF55347 152 314 3.43E-70 T 11-10-2018 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 SMART SM00846 3 152 5.0E-83 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 8.6E-37 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 6.4E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 6.4E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 6.4E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 6.4E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 6.4E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 SUPERFAMILY SSF51735 1 180 1.06E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_18105 53cb61741b81388d39881b7e8df2996f 345 PIRSF PIRSF000149 1 335 2.7E-136 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 Gene3D G3DSA:3.30.360.10 151 315 3.6E-149 T 11-10-2018 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.3E-132 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.4E-68 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_18105 53cb61741b81388d39881b7e8df2996f 345 Gene3D G3DSA:3.40.50.720 4 328 3.6E-149 T 11-10-2018 UP17_01110 c97ee2955dc0263c97162c0693955cd4 461 Gene3D G3DSA:1.10.3110.10 106 199 4.2E-107 T 11-10-2018 UP17_01110 c97ee2955dc0263c97162c0693955cd4 461 SUPERFAMILY SSF51905 2 457 1.26E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_01110 c97ee2955dc0263c97162c0693955cd4 461 Pfam PF01593 Flavin containing amine oxidoreductase 11 457 8.9E-42 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 UP17_01110 c97ee2955dc0263c97162c0693955cd4 461 SUPERFAMILY SSF54373 301 407 4.51E-17 T 11-10-2018 UP17_01110 c97ee2955dc0263c97162c0693955cd4 461 Gene3D G3DSA:3.50.50.60 5 449 4.2E-107 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_01110 c97ee2955dc0263c97162c0693955cd4 461 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 1 457 7.6E-79 T 11-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 UP17_01110 c97ee2955dc0263c97162c0693955cd4 461 Gene3D G3DSA:3.90.660.20 40 407 4.2E-107 T 11-10-2018 UP17_10670 dd8c3b560d5406fa95ceadfcb558f26c 195 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 194 2.6E-66 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_10670 dd8c3b560d5406fa95ceadfcb558f26c 195 SMART SM01207 8 185 4.4E-85 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_10670 dd8c3b560d5406fa95ceadfcb558f26c 195 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 184 9.6E-54 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_10670 dd8c3b560d5406fa95ceadfcb558f26c 195 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 193 20.529 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 Gene3D G3DSA:3.30.565.10 220 369 9.3E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 367 9.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 Gene3D G3DSA:1.10.287.130 160 215 2.1E-13 T 11-10-2018 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 SMART SM00387 262 369 1.3E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 330 6.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 6.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 349 6.9E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 Pfam PF09385 Histidine kinase N terminal 8 134 3.1E-20 T 11-10-2018 IPR018984 Histidine kinase, N-terminal UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 SMART SM00388 157 219 5.7E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 SUPERFAMILY SSF47384 152 218 1.65E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 SUPERFAMILY SSF55874 210 367 1.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 218 3.8E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_05165 6d22bfb5616575c6f46e943a18991d82 369 Gene3D G3DSA:1.10.490.70 1 151 9.9E-41 T 11-10-2018 IPR038284 Histidine kinase, N-terminal domain superfamily UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 SUPERFAMILY SSF56719 30 485 2.09E-165 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Gene3D G3DSA:2.120.10.90 499 813 1.8E-103 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 SMART SM00434 10 463 1.1E-251 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 470 1.4E-148 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Gene3D G3DSA:1.10.268.10 368 456 1.9E-193 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 790 8.0E-265 T 11-10-2018 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 804 32.866 T 11-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Gene3D G3DSA:3.90.199.10 31 485 1.9E-193 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Gene3D G3DSA:3.30.1360.40 235 331 1.9E-193 T 11-10-2018 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 696 7.8E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 598 5.3E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 527 0.15 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 754 2.1E-5 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 647 4.2E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 SUPERFAMILY SSF101904 499 808 6.8E-88 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal UP17_10685 2e18e2c1bc702bd0088ebfff772a1274 813 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 8 746 0.0 T 11-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UP17_00225 24bd287ce6ed28c7a3b5efc4723badef 94 SMART SM00966 8 51 6.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_00225 24bd287ce6ed28c7a3b5efc4723badef 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.8E-11 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_00225 24bd287ce6ed28c7a3b5efc4723badef 94 Gene3D G3DSA:2.10.260.10 1 51 2.3E-26 T 11-10-2018 UP17_00225 24bd287ce6ed28c7a3b5efc4723badef 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 8.2E-11 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_00225 24bd287ce6ed28c7a3b5efc4723badef 94 SUPERFAMILY SSF89447 1 52 1.29E-16 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 PRINTS PR01035 Tetracycline resistance protein signature 164 184 6.6E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 PRINTS PR01035 Tetracycline resistance protein signature 136 158 6.6E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 PRINTS PR01035 Tetracycline resistance protein signature 21 37 6.6E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 PRINTS PR01035 Tetracycline resistance protein signature 341 364 6.6E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 Pfam PF07690 Major Facilitator Superfamily 16 234 1.3E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 SUPERFAMILY SSF103473 1 393 1.02E-76 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 Gene3D G3DSA:1.20.1250.20 4 393 2.3E-74 T 11-10-2018 UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 48 186 2.2E-40 T 11-10-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 UP17_14685 9a3ba21fcb8cf5e85f879ce933847e2b 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_20605 4fc4aa5a312631c1e9ac3616b71731ea 416 Gene3D G3DSA:2.30.40.10 31 402 1.6E-97 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_20605 4fc4aa5a312631c1e9ac3616b71731ea 416 Gene3D G3DSA:3.20.20.140 69 363 1.6E-97 T 11-10-2018 UP17_20605 4fc4aa5a312631c1e9ac3616b71731ea 416 SUPERFAMILY SSF51556 68 373 6.5E-70 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_20605 4fc4aa5a312631c1e9ac3616b71731ea 416 Pfam PF07969 Amidohydrolase family 175 404 8.3E-18 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_20605 4fc4aa5a312631c1e9ac3616b71731ea 416 Pfam PF07969 Amidohydrolase family 57 149 1.8E-7 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_06970 80c4879651956d45056323a32af14eb4 470 SUPERFAMILY SSF51905 7 340 1.37E-65 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_06970 80c4879651956d45056323a32af14eb4 470 Gene3D G3DSA:3.30.390.30 348 468 7.0E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_06970 80c4879651956d45056323a32af14eb4 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 UP17_06970 80c4879651956d45056323a32af14eb4 470 PIRSF PIRSF000350 3 459 2.5E-103 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 UP17_06970 80c4879651956d45056323a32af14eb4 470 Gene3D G3DSA:3.50.50.60 13 335 1.7E-124 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_06970 80c4879651956d45056323a32af14eb4 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 1.7E-174 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 UP17_06970 80c4879651956d45056323a32af14eb4 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 1.3E-36 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 UP17_06970 80c4879651956d45056323a32af14eb4 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 9.1E-69 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 1.6E-40 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.6E-40 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 1.6E-40 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.6E-40 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.6E-40 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 Gene3D G3DSA:3.50.50.60 152 273 1.7E-124 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 8.7E-77 T 11-10-2018 UP17_06970 80c4879651956d45056323a32af14eb4 470 SUPERFAMILY SSF55424 346 468 1.25E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Gene3D G3DSA:3.40.50.300 272 413 1.3E-52 T 11-10-2018 UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Pfam PF04851 Type III restriction enzyme, res subunit 13 138 1.1E-10 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 SMART SM00490 459 545 2.8E-20 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 SUPERFAMILY SSF46600 615 659 7.06E-10 T 11-10-2018 IPR036876 UVR domain superfamily UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Gene3D G3DSA:3.40.50.300 414 595 1.0E-54 T 11-10-2018 UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Pfam PF12344 Ultra-violet resistance protein B 551 593 1.1E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 660 44.635 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Pfam PF00271 Helicase conserved C-terminal domain 435 544 2.5E-19 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Gene3D G3DSA:3.40.50.300 1 243 6.2E-83 T 11-10-2018 UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 SUPERFAMILY SSF52540 3 414 7.76E-142 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 SUPERFAMILY SSF52540 324 586 1.15E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 SMART SM00487 9 425 3.4E-25 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 658 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 UP17_23625 400bd5a61e3d0ed10ca95f1202b35837 661 Pfam PF02151 UvrB/uvrC motif 627 659 7.9E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 UP17_22070 ea9e3e720c9375c1fc870412857b8d53 455 Pfam PF01554 MatE 247 399 3.6E-19 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_22070 ea9e3e720c9375c1fc870412857b8d53 455 Pfam PF01554 MatE 27 188 8.4E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_22070 ea9e3e720c9375c1fc870412857b8d53 455 PIRSF PIRSF006603 1 451 5.8E-63 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_24630 e19ae59c33aa3d9d66d395444df9bf7b 270 Pfam PF08241 Methyltransferase domain 79 171 6.0E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 UP17_24630 e19ae59c33aa3d9d66d395444df9bf7b 270 Gene3D G3DSA:3.40.50.150 55 264 1.2E-23 T 11-10-2018 UP17_24630 e19ae59c33aa3d9d66d395444df9bf7b 270 SUPERFAMILY SSF53335 58 252 4.4E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_24890 fea5cd249ec0a51082fe58fdd61999da 443 Gene3D G3DSA:3.30.310.160 223 367 1.7E-54 T 11-10-2018 UP17_24890 fea5cd249ec0a51082fe58fdd61999da 443 Gene3D G3DSA:3.10.450.310 203 405 1.7E-54 T 11-10-2018 UP17_24890 fea5cd249ec0a51082fe58fdd61999da 443 Pfam PF07435 YycH protein 4 433 2.8E-105 T 11-10-2018 IPR009996 Regulatory protein YycH UP17_00025 00f8f43265bbc54e3b8837c86e7ee94f 87 Pfam PF04025 Domain of unknown function (DUF370) 3 73 6.5E-10 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 780 17.456 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Gene3D G3DSA:3.40.50.300 397 570 9.1E-287 T 11-10-2018 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 SMART SM00957 5 382 6.8E-222 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 SUPERFAMILY SSF81767 229 348 1.44E-38 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 SUPERFAMILY SSF81886 575 785 2.09E-35 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 PRINTS PR00906 SecA protein signature 61 85 8.9E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 PRINTS PR00906 SecA protein signature 99 113 8.9E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 PRINTS PR00906 SecA protein signature 168 188 8.9E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 PRINTS PR00906 SecA protein signature 356 373 8.9E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 PRINTS PR00906 SecA protein signature 115 125 8.9E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 PRINTS PR00906 SecA protein signature 319 341 8.9E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 PRINTS PR00906 SecA protein signature 393 406 8.9E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Pfam PF00271 Helicase conserved C-terminal domain 414 529 9.8E-6 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Pfam PF07516 SecA Wing and Scaffold domain 575 772 2.5E-32 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 1.6E-199 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 SMART SM00958 226 338 3.2E-48 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Pfam PF01043 SecA preprotein cross-linking domain 235 338 6.7E-31 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Gene3D G3DSA:1.10.3060.10 571 771 9.1E-287 T 11-10-2018 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 SUPERFAMILY SSF52540 397 564 1.39E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 SUPERFAMILY SSF52540 6 395 6.39E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Pfam PF07517 SecA DEAD-like domain 6 382 3.7E-112 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Gene3D G3DSA:3.40.50.300 15 396 9.1E-287 T 11-10-2018 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Gene3D G3DSA:3.90.1440.10 227 348 9.1E-287 T 11-10-2018 UP17_23910 461b1fbc7f86a967562dfd1f48633547 790 Gene3D G3DSA:1.10.1200.230 621 704 9.1E-287 T 11-10-2018 UP17_06730 168752d21097e77add6aab68157b8b44 243 Pfam PF02535 ZIP Zinc transporter 101 238 4.4E-14 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 UP17_16425 963407d7ccde117b0c695c70483637ae 208 SMART SM00849 12 191 1.0E-46 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_16425 963407d7ccde117b0c695c70483637ae 208 SUPERFAMILY SSF56281 1 208 2.1E-57 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_16425 963407d7ccde117b0c695c70483637ae 208 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 1.3E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_16425 963407d7ccde117b0c695c70483637ae 208 Gene3D G3DSA:3.60.15.10 1 208 4.5E-67 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 Gene3D G3DSA:3.40.50.300 70 375 5.2E-103 T 11-10-2018 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 519 5.0E-201 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 148 7.2E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 SUPERFAMILY SSF54980 390 461 3.96E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 Gene3D G3DSA:3.40.50.300 108 271 5.2E-103 T 11-10-2018 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 Pfam PF00009 Elongation factor Tu GTP binding domain 11 273 6.9E-50 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 SUPERFAMILY SSF52540 8 273 3.9E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 521 49.261 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 Pfam PF03144 Elongation factor Tu domain 2 310 376 6.5E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 509 5.6E-43 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 SUPERFAMILY SSF50447 258 386 8.25E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_06600 3bf38f2af42541c28b43f81865f9e39b 524 Gene3D G3DSA:3.30.70.3280 387 523 5.3E-46 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily UP17_13860 b7f9db074ac317bfe2a2be0663c09f38 401 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 392 4.7E-123 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 UP17_13860 b7f9db074ac317bfe2a2be0663c09f38 401 SUPERFAMILY SSF56796 3 400 7.46E-124 T 11-10-2018 UP17_13860 b7f9db074ac317bfe2a2be0663c09f38 401 Gene3D G3DSA:3.40.50.1970 1 187 2.2E-61 T 11-10-2018 UP17_13860 b7f9db074ac317bfe2a2be0663c09f38 401 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 UP17_13860 b7f9db074ac317bfe2a2be0663c09f38 401 Gene3D G3DSA:1.20.1090.10 189 401 7.2E-66 T 11-10-2018 UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 58 1.0E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Pfam PF03061 Thioesterase superfamily 353 425 7.5E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 SMART SM00116 200 248 3.3 T 11-10-2018 IPR000644 CBS domain UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 SMART SM00116 259 307 0.0013 T 11-10-2018 IPR000644 CBS domain UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 SUPERFAMILY SSF75138 72 185 1.7E-28 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 SUPERFAMILY SSF54631 182 306 1.24E-26 T 11-10-2018 UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Pfam PF07085 DRTGG domain 76 178 1.5E-29 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 SUPERFAMILY SSF54637 335 437 9.84E-21 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Pfam PF00571 CBS domain 219 244 0.0012 T 11-10-2018 IPR000644 CBS domain UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Pfam PF00571 CBS domain 254 307 1.5E-6 T 11-10-2018 IPR000644 CBS domain UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 SUPERFAMILY SSF46785 5 54 1.31E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Gene3D G3DSA:3.40.1390.20 71 178 5.8E-25 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Gene3D G3DSA:3.10.129.10 321 438 4.7E-12 T 11-10-2018 UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Gene3D G3DSA:3.10.580.10 186 314 7.6E-20 T 11-10-2018 UP17_18245 956b8e4bd0622adda56d0b77c3b61101 439 Gene3D G3DSA:1.10.10.10 4 70 1.3E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16205 d2efa22fd00f04ae28968a1f1e6539a0 278 SUPERFAMILY SSF55681 5 276 3.07E-69 T 11-10-2018 UP17_16205 d2efa22fd00f04ae28968a1f1e6539a0 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 1.8E-25 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 UP17_16205 d2efa22fd00f04ae28968a1f1e6539a0 278 Gene3D G3DSA:3.30.930.10 5 278 2.1E-69 T 11-10-2018 UP17_16205 d2efa22fd00f04ae28968a1f1e6539a0 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 66.753 T 11-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 SUPERFAMILY SSF141734 3 108 4.32E-45 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 2 105 28.752 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 SUPERFAMILY SSF101386 120 208 5.42E-26 T 11-10-2018 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 207 4.8E-18 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 4 209 37.367 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 100 3.1E-32 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 204 2.0E-32 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 Gene3D G3DSA:1.10.287.1080 117 210 2.6E-33 T 11-10-2018 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 118 204 20.609 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 Gene3D G3DSA:3.10.20.400 1 92 1.2E-36 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 UP17_23540 b75eef5965fa5886a29f5f714256d772 217 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 51 100 3.0E-18 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 UP17_02525 38b65969ec0efd2d591db36aea5bbfaf 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 300 5.0E-21 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain UP17_02525 38b65969ec0efd2d591db36aea5bbfaf 303 Gene3D G3DSA:3.40.50.720 1 175 1.4E-42 T 11-10-2018 UP17_02525 38b65969ec0efd2d591db36aea5bbfaf 303 SUPERFAMILY SSF48179 178 302 3.37E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_02525 38b65969ec0efd2d591db36aea5bbfaf 303 Gene3D G3DSA:1.10.1040.10 178 300 4.1E-28 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_02525 38b65969ec0efd2d591db36aea5bbfaf 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 300 1.9E-63 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 UP17_02525 38b65969ec0efd2d591db36aea5bbfaf 303 SUPERFAMILY SSF51735 3 133 7.04E-11 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_02525 38b65969ec0efd2d591db36aea5bbfaf 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 150 5.4E-32 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 Pfam PF01494 FAD binding domain 9 349 3.6E-16 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 2.7E-10 T 11-10-2018 UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.7E-10 T 11-10-2018 UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 155 170 2.7E-10 T 11-10-2018 UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 354 2.7E-10 T 11-10-2018 UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 Gene3D G3DSA:3.50.50.60 9 354 1.5E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 Gene3D G3DSA:3.30.9.30 40 361 1.5E-119 T 11-10-2018 UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 SUPERFAMILY SSF54373 181 282 2.94E-13 T 11-10-2018 UP17_05920 66433ed0fcb5a99e581d6851891fcb1b 399 SUPERFAMILY SSF51905 8 375 9.23E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_02230 42bbec199047e1d4a1961674e18e11fa 468 SUPERFAMILY SSF52025 116 222 1.96E-24 T 11-10-2018 UP17_02230 42bbec199047e1d4a1961674e18e11fa 468 Pfam PF04389 Peptidase family M28 242 433 6.2E-42 T 11-10-2018 IPR007484 Peptidase M28 UP17_02230 42bbec199047e1d4a1961674e18e11fa 468 SUPERFAMILY SSF53187 37 439 5.78E-61 T 11-10-2018 UP17_02230 42bbec199047e1d4a1961674e18e11fa 468 Gene3D G3DSA:3.50.30.30 104 232 1.3E-132 T 11-10-2018 UP17_02230 42bbec199047e1d4a1961674e18e11fa 468 Pfam PF02225 PA domain 131 214 3.8E-19 T 11-10-2018 IPR003137 PA domain UP17_02230 42bbec199047e1d4a1961674e18e11fa 468 Gene3D G3DSA:3.40.630.10 64 428 1.3E-132 T 11-10-2018 UP17_06650 63ea83b63aeed0eb50e3da9bbe5319c1 257 ProSitePatterns PS00267 Tachykinin family signature. 48 53 - T 11-10-2018 IPR013055 Tachykinin/Neurokinin-like, conserved site UP17_06650 63ea83b63aeed0eb50e3da9bbe5319c1 257 SUPERFAMILY SSF103473 11 242 3.27E-5 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_06650 63ea83b63aeed0eb50e3da9bbe5319c1 257 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 246 4.1E-94 T 11-10-2018 IPR022493 Integral membrane YkoY UP17_06650 63ea83b63aeed0eb50e3da9bbe5319c1 257 Pfam PF03741 Integral membrane protein TerC family 16 204 7.9E-52 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Gene3D G3DSA:2.40.50.140 136 197 8.3E-25 T 11-10-2018 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 SUPERFAMILY SSF54814 278 341 7.85E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Pfam PF13184 NusA-like KH domain 229 296 1.6E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 SMART SM00322 302 356 4.6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 SMART SM00322 229 301 5.2E-5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 SUPERFAMILY SSF54814 199 277 2.03E-30 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Pfam PF08529 NusA N-terminal domain 4 123 8.8E-42 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Pfam PF00575 S1 RNA binding domain 133 193 2.3E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 375 30.252 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Gene3D G3DSA:3.30.1480.10 1 124 1.2E-47 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Gene3D G3DSA:3.30.300.20 277 375 1.8E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 SUPERFAMILY SSF50249 132 198 1.25E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 SUPERFAMILY SSF69705 1 126 1.26E-41 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 SMART SM00316 133 199 2.1E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 3.3E-127 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 UP17_07980 d9682cf403a6bfd010e4b8c36fb32bb3 376 Gene3D G3DSA:3.30.300.20 198 276 2.8E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_00645 9ca1a45be37f5eb3f3ed0f8f02637020 201 Pfam PF05175 Methyltransferase small domain 28 196 2.9E-49 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 UP17_00645 9ca1a45be37f5eb3f3ed0f8f02637020 201 Gene3D G3DSA:3.40.50.150 6 201 2.1E-44 T 11-10-2018 UP17_00645 9ca1a45be37f5eb3f3ed0f8f02637020 201 SUPERFAMILY SSF53335 12 199 7.99E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_24315 a646c1529e23f673f2199b9b08e4e430 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 7.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_24315 a646c1529e23f673f2199b9b08e4e430 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 7.7E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_24315 a646c1529e23f673f2199b9b08e4e430 210 Gene3D G3DSA:1.10.10.60 11 63 2.8E-16 T 11-10-2018 UP17_24315 a646c1529e23f673f2199b9b08e4e430 210 SUPERFAMILY SSF46689 16 93 7.98E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_24315 a646c1529e23f673f2199b9b08e4e430 210 SUPERFAMILY SSF48498 92 202 2.67E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_24315 a646c1529e23f673f2199b9b08e4e430 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 66 3.7E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_24315 a646c1529e23f673f2199b9b08e4e430 210 Gene3D G3DSA:1.10.357.10 64 205 4.5E-14 T 11-10-2018 UP17_20630 d5e16bd614f6a66fb7f450bd2b3e3859 518 Gene3D G3DSA:3.40.190.10 199 501 3.0E-151 T 11-10-2018 UP17_20630 d5e16bd614f6a66fb7f450bd2b3e3859 518 Gene3D G3DSA:3.10.105.10 273 492 3.0E-151 T 11-10-2018 UP17_20630 d5e16bd614f6a66fb7f450bd2b3e3859 518 Gene3D G3DSA:3.90.76.10 50 198 3.0E-151 T 11-10-2018 UP17_20630 d5e16bd614f6a66fb7f450bd2b3e3859 518 PIRSF PIRSF002741 2 517 7.6E-133 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 UP17_20630 d5e16bd614f6a66fb7f450bd2b3e3859 518 SUPERFAMILY SSF53850 37 518 3.37E-151 T 11-10-2018 UP17_20630 d5e16bd614f6a66fb7f450bd2b3e3859 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 435 3.2E-103 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 Gene3D G3DSA:3.40.630.10 170 495 1.4E-125 T 11-10-2018 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 345 352 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 Gene3D G3DSA:3.40.220.10 7 157 3.8E-38 T 11-10-2018 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 SUPERFAMILY SSF52949 14 174 5.65E-36 T 11-10-2018 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 PRINTS PR00481 Cytosol aminopeptidase signature 341 361 3.2E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 3.2E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 3.2E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 PRINTS PR00481 Cytosol aminopeptidase signature 319 340 3.2E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 PRINTS PR00481 Cytosol aminopeptidase signature 260 277 3.2E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 146 1.3E-27 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 498 34.748 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 489 1.0E-115 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 UP17_22950 1c2e4a6e28437ab91ded194eb3c2fd0d 501 SUPERFAMILY SSF53187 180 493 8.79E-111 T 11-10-2018 UP17_10765 bd30095ac56ea3a806a429296ad67131 238 SMART SM00448 4 116 3.7E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_10765 bd30095ac56ea3a806a429296ad67131 238 Gene3D G3DSA:3.40.50.2300 3 128 8.4E-26 T 11-10-2018 UP17_10765 bd30095ac56ea3a806a429296ad67131 238 SUPERFAMILY SSF52172 4 122 4.98E-23 T 11-10-2018 IPR011006 CheY-like superfamily UP17_10765 bd30095ac56ea3a806a429296ad67131 238 Gene3D G3DSA:2.40.50.40 129 195 2.8E-13 T 11-10-2018 UP17_10765 bd30095ac56ea3a806a429296ad67131 238 SMART SM00850 135 235 4.8E-21 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_10765 bd30095ac56ea3a806a429296ad67131 238 Pfam PF00072 Response regulator receiver domain 7 116 4.6E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_10765 bd30095ac56ea3a806a429296ad67131 238 Pfam PF04397 LytTr DNA-binding domain 136 234 1.6E-19 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 Gene3D G3DSA:3.40.50.1000 316 585 6.6E-84 T 11-10-2018 IPR023214 HAD superfamily UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 610 2.5E-78 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 SUPERFAMILY SSF81653 137 234 3.4E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 SUPERFAMILY SSF81665 86 611 5.36E-19 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 Gene3D G3DSA:3.40.1110.10 346 466 6.6E-84 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 481 491 4.9E-30 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 553 4.9E-30 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 335 349 4.9E-30 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 459 470 4.9E-30 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 569 4.9E-30 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 184 198 4.9E-30 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 SUPERFAMILY SSF56784 334 634 3.3E-58 T 11-10-2018 IPR036412 HAD-like superfamily UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 Pfam PF00702 haloacid dehalogenase-like hydrolase 332 547 2.3E-36 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 4.8E-14 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00941 Cadmium-transporting ATPase signature 64 76 4.8E-14 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00941 Cadmium-transporting ATPase signature 119 139 4.8E-14 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00941 Cadmium-transporting ATPase signature 139 155 4.8E-14 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 PRINTS PR00941 Cadmium-transporting ATPase signature 219 233 4.8E-14 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 ProSitePatterns PS01229 Hypothetical cof family signature 2. 534 556 - T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 636 2.1E-182 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 84 387 2.3E-97 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 Gene3D G3DSA:2.70.150.20 128 239 5.2E-35 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 Pfam PF00122 E1-E2 ATPase 135 315 2.7E-48 T 11-10-2018 UP17_02750 6b33ffc0b48d618a5d37bc89f0549cda 639 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 337 343 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 UP17_02110 de07dd2b4d25f62af7cf6cdf1570f45f 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 3.7E-155 T 11-10-2018 IPR010894 Stage V sporulation AD UP17_02110 de07dd2b4d25f62af7cf6cdf1570f45f 339 PIRSF PIRSF011570 1 335 9.1E-159 T 11-10-2018 IPR010894 Stage V sporulation AD UP17_02110 de07dd2b4d25f62af7cf6cdf1570f45f 339 SUPERFAMILY SSF53901 56 286 2.16E-16 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_02110 de07dd2b4d25f62af7cf6cdf1570f45f 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 2.0E-155 T 11-10-2018 IPR010894 Stage V sporulation AD UP17_02110 de07dd2b4d25f62af7cf6cdf1570f45f 339 Gene3D G3DSA:3.40.47.40 1 338 5.3E-148 T 11-10-2018 IPR038369 Stage V sporulation AD superfamily UP17_10870 400422c309e8ddfbc23f6c920c5039a0 337 Gene3D G3DSA:3.40.1190.20 2 337 2.9E-102 T 11-10-2018 IPR029056 Ribokinase-like UP17_10870 400422c309e8ddfbc23f6c920c5039a0 337 Pfam PF00294 pfkB family carbohydrate kinase 3 316 7.7E-32 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB UP17_10870 400422c309e8ddfbc23f6c920c5039a0 337 SUPERFAMILY SSF53613 1 328 1.15E-64 T 11-10-2018 IPR029056 Ribokinase-like UP17_08460 2adb39648dc44a30c4aa89aef5291c48 422 Pfam PF01546 Peptidase family M20/M25/M40 87 415 1.1E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_08460 2adb39648dc44a30c4aa89aef5291c48 422 SUPERFAMILY SSF55031 199 319 1.94E-13 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_08460 2adb39648dc44a30c4aa89aef5291c48 422 Gene3D G3DSA:3.40.630.10 37 417 1.1E-68 T 11-10-2018 UP17_08460 2adb39648dc44a30c4aa89aef5291c48 422 SUPERFAMILY SSF53187 6 418 2.86E-52 T 11-10-2018 UP17_08460 2adb39648dc44a30c4aa89aef5291c48 422 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 85 94 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UP17_08460 2adb39648dc44a30c4aa89aef5291c48 422 Gene3D G3DSA:3.30.70.360 196 334 1.1E-68 T 11-10-2018 UP17_08460 2adb39648dc44a30c4aa89aef5291c48 422 Pfam PF07687 Peptidase dimerisation domain 195 321 3.6E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 SUPERFAMILY SSF89550 12 263 1.77E-13 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 713 2.1E-171 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 Pfam PF01336 OB-fold nucleic acid binding domain 973 1040 9.3E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 Pfam PF14579 Helix-hairpin-helix motif 787 874 9.1E-25 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 Gene3D G3DSA:1.10.150.870 767 863 1.0E-5 T 11-10-2018 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 Pfam PF02811 PHP domain 13 172 4.7E-32 T 11-10-2018 IPR004013 PHP domain GO:0003824 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 11 1001 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 Gene3D G3DSA:3.20.20.140 3 269 1.0E-79 T 11-10-2018 UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 SMART SM00481 12 79 5.9E-20 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal UP17_18220 80d492f564c6b1c4fb7f324791757c1b 1128 Gene3D G3DSA:1.10.10.1600 424 501 2.6E-21 T 11-10-2018 UP17_07735 cbbe0151d412752987bee7dfde2fe420 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 299 5.1E-110 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 UP17_07735 cbbe0151d412752987bee7dfde2fe420 300 Pfam PF00589 Phage integrase family 113 286 1.7E-50 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_07735 cbbe0151d412752987bee7dfde2fe420 300 Gene3D G3DSA:1.10.150.130 4 99 5.2E-26 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_07735 cbbe0151d412752987bee7dfde2fe420 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 300 56.253 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD UP17_07735 cbbe0151d412752987bee7dfde2fe420 300 Gene3D G3DSA:1.10.443.10 112 294 7.4E-61 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_07735 cbbe0151d412752987bee7dfde2fe420 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 1.0E-22 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 UP17_07735 cbbe0151d412752987bee7dfde2fe420 300 SUPERFAMILY SSF56349 8 293 7.65E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_17710 068deb9b6c739e496f886a2a95ce827f 199 Pfam PF00694 Aconitase C-terminal domain 2 123 5.3E-34 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 UP17_17710 068deb9b6c739e496f886a2a95ce827f 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 1.8E-80 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 UP17_17710 068deb9b6c739e496f886a2a95ce827f 199 Gene3D G3DSA:3.20.19.10 1 174 1.7E-70 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 UP17_17710 068deb9b6c739e496f886a2a95ce827f 199 SUPERFAMILY SSF52016 1 191 3.73E-59 T 11-10-2018 UP17_17710 068deb9b6c739e496f886a2a95ce827f 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 39.919 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 Gene3D G3DSA:3.40.50.300 1 197 3.3E-69 T 11-10-2018 UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 SMART SM00490 241 323 7.0E-25 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 Pfam PF00270 DEAD/DEAH box helicase 18 177 6.8E-21 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 344 7.8E-107 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 Pfam PF00271 Helicase conserved C-terminal domain 214 321 2.3E-19 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 SMART SM00487 12 205 2.5E-33 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 Pfam PF16124 RecQ zinc-binding 405 461 6.6E-7 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 130 139 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site UP17_15575 8a5eb4c565f33525da2cbad739dc616c 503 SUPERFAMILY SSF52540 23 335 9.96E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09805 20dc6118ae46517f02ba1f57304f313a 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 8.8E-53 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_09805 20dc6118ae46517f02ba1f57304f313a 327 Gene3D G3DSA:3.40.50.970 1 192 8.0E-93 T 11-10-2018 UP17_09805 20dc6118ae46517f02ba1f57304f313a 327 SUPERFAMILY SSF52518 2 204 1.08E-73 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_09805 20dc6118ae46517f02ba1f57304f313a 327 SUPERFAMILY SSF52922 188 324 1.57E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_09805 20dc6118ae46517f02ba1f57304f313a 327 SMART SM00861 4 179 2.8E-71 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_09805 20dc6118ae46517f02ba1f57304f313a 327 Gene3D G3DSA:3.40.50.920 193 326 4.4E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_09805 20dc6118ae46517f02ba1f57304f313a 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 3.7E-39 T 11-10-2018 IPR033248 Transketolase, C-terminal domain UP17_15750 86926fce5a797703b83a3afe6c0d482e 116 SUPERFAMILY SSF52091 3 113 6.67E-29 T 11-10-2018 IPR036513 STAS domain superfamily UP17_15750 86926fce5a797703b83a3afe6c0d482e 116 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 103 3.7E-36 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 UP17_15750 86926fce5a797703b83a3afe6c0d482e 116 Gene3D G3DSA:3.30.750.24 2 116 7.4E-32 T 11-10-2018 IPR036513 STAS domain superfamily UP17_15750 86926fce5a797703b83a3afe6c0d482e 116 Pfam PF01740 STAS domain 5 108 1.1E-24 T 11-10-2018 IPR002645 STAS domain UP17_15750 86926fce5a797703b83a3afe6c0d482e 116 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 5 110 3.9E-45 T 11-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 UP17_04545 9d862520a058507ffeb0c34f95e1e301 138 Pfam PF02082 Transcriptional regulator 11 85 1.1E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_04545 9d862520a058507ffeb0c34f95e1e301 138 SUPERFAMILY SSF46785 10 136 2.98E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_04545 9d862520a058507ffeb0c34f95e1e301 138 Gene3D G3DSA:1.10.10.10 5 138 2.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04545 9d862520a058507ffeb0c34f95e1e301 138 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site UP17_13240 adc820179e75d554db71f3dce26ab122 249 ProSitePatterns PS01228 Hypothetical cof family signature 1. 10 21 - T 11-10-2018 UP17_13240 adc820179e75d554db71f3dce26ab122 249 Gene3D G3DSA:3.40.50.1000 9 242 2.0E-62 T 11-10-2018 IPR023214 HAD superfamily UP17_13240 adc820179e75d554db71f3dce26ab122 249 Pfam PF08282 haloacid dehalogenase-like hydrolase 11 242 9.3E-56 T 11-10-2018 UP17_13240 adc820179e75d554db71f3dce26ab122 249 SUPERFAMILY SSF56784 3 247 2.38E-67 T 11-10-2018 IPR036412 HAD-like superfamily UP17_13240 adc820179e75d554db71f3dce26ab122 249 Gene3D G3DSA:3.30.1240.10 88 171 2.0E-62 T 11-10-2018 UP17_13240 adc820179e75d554db71f3dce26ab122 249 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 215 1.6E-25 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_13240 adc820179e75d554db71f3dce26ab122 249 ProSitePatterns PS01229 Hypothetical cof family signature 2. 196 218 - T 11-10-2018 UP17_23810 238119a890e67f144ba2612dbee417fd 211 SUPERFAMILY SSF54211 2 129 8.72E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_23810 238119a890e67f144ba2612dbee417fd 211 SUPERFAMILY SSF54980 135 200 3.24E-9 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_23810 238119a890e67f144ba2612dbee417fd 211 Pfam PF01205 Uncharacterized protein family UPF0029 20 122 2.1E-34 T 11-10-2018 IPR001498 Impact, N-terminal UP17_23810 238119a890e67f144ba2612dbee417fd 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site UP17_23810 238119a890e67f144ba2612dbee417fd 211 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 3.4E-17 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal UP17_23810 238119a890e67f144ba2612dbee417fd 211 Gene3D G3DSA:3.30.230.30 1 131 1.7E-51 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily UP17_23810 238119a890e67f144ba2612dbee417fd 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 3.7E-75 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal UP17_18770 faefb712abcdbc902d6ea7108add078d 240 Gene3D G3DSA:3.10.290.10 1 57 3.0E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 Gene3D G3DSA:3.30.70.1560 129 212 2.5E-56 T 11-10-2018 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 SUPERFAMILY SSF55120 45 234 1.98E-44 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 4.4E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 Gene3D G3DSA:3.30.70.580 62 230 2.5E-56 T 11-10-2018 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 SMART SM00363 1 60 1.4E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 Pfam PF01479 S4 domain 1 47 3.9E-12 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 SUPERFAMILY SSF55174 1 59 1.49E-12 T 11-10-2018 UP17_18770 faefb712abcdbc902d6ea7108add078d 240 Pfam PF00849 RNA pseudouridylate synthase 62 195 5.3E-21 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 PIRSF PIRSF036979 1 298 1.2E-38 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 Gene3D G3DSA:3.40.800.10 2 300 3.5E-120 T 11-10-2018 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 TIGRFAM TIGR01229 rocF_arginase: arginase 6 300 6.4E-110 T 11-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 SUPERFAMILY SSF52768 4 297 7.38E-95 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 PRINTS PR00116 Arginase signature 119 146 7.3E-42 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 PRINTS PR00116 Arginase signature 222 251 7.3E-42 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 PRINTS PR00116 Arginase signature 96 111 7.3E-42 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 PRINTS PR00116 Arginase signature 257 271 7.3E-42 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 PRINTS PR00116 Arginase signature 173 191 7.3E-42 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_11665 fe4ca11921a8ca56baef01b99217ec3d 317 Pfam PF00491 Arginase family 4 295 1.3E-81 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 454 1.1E-35 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 Gene3D G3DSA:3.30.420.40 3 250 5.2E-80 T 11-10-2018 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 250 6.0E-71 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 PIRSF PIRSF000538 4 506 2.7E-147 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 SUPERFAMILY SSF53067 6 252 7.11E-69 T 11-10-2018 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 Gene3D G3DSA:3.30.420.40 252 514 1.2E-90 T 11-10-2018 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 6 510 3.1E-232 T 11-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 UP17_24525 9da21bf80d8687d6f0ed65c0eabc0d78 514 SUPERFAMILY SSF53067 253 499 2.46E-67 T 11-10-2018 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 SUPERFAMILY SSF48179 162 269 1.11E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 PIRSF PIRSF000193 1 269 2.0E-80 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 5.5E-36 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 99 2.0E-22 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 26.247 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 Gene3D G3DSA:3.40.50.720 1 164 3.5E-48 T 11-10-2018 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 SUPERFAMILY SSF51735 2 160 6.03E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 265 4.5E-84 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 UP17_15870 18c176b5137aecd461f1b3e12d20f787 281 Gene3D G3DSA:1.10.3730.10 165 271 3.1E-39 T 11-10-2018 UP17_07505 1239cac782197fc4639b063ec227aa42 803 TIGRFAM TIGR00595 priA: primosomal protein N' 290 799 7.2E-217 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 UP17_07505 1239cac782197fc4639b063ec227aa42 803 Gene3D G3DSA:1.10.8.630 2 113 3.8E-24 T 11-10-2018 UP17_07505 1239cac782197fc4639b063ec227aa42 803 Gene3D G3DSA:3.40.50.300 252 447 4.8E-79 T 11-10-2018 UP17_07505 1239cac782197fc4639b063ec227aa42 803 Pfam PF04851 Type III restriction enzyme, res subunit 264 429 3.1E-18 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 UP17_07505 1239cac782197fc4639b063ec227aa42 803 SUPERFAMILY SSF52540 530 706 6.46E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07505 1239cac782197fc4639b063ec227aa42 803 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 802 25.127 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 UP17_07505 1239cac782197fc4639b063ec227aa42 803 SUPERFAMILY SSF52540 245 448 9.38E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07505 1239cac782197fc4639b063ec227aa42 803 SMART SM00487 262 461 1.5E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_07505 1239cac782197fc4639b063ec227aa42 803 Pfam PF00271 Helicase conserved C-terminal domain 564 660 1.5E-7 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_07505 1239cac782197fc4639b063ec227aa42 803 SMART SM00490 564 661 1.3E-9 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 Gene3D G3DSA:1.20.1560.10 20 365 8.7E-109 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 Pfam PF00005 ABC transporter 394 542 1.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 SUPERFAMILY SSF90123 33 361 9.16E-89 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 SMART SM00382 402 594 2.7E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 Gene3D G3DSA:3.40.50.300 374 618 2.6E-86 T 11-10-2018 UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 SUPERFAMILY SSF52540 370 613 1.28E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 ProSitePatterns PS00211 ABC transporters family signature. 514 528 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_09785 3a7546fd73a99df8d125afa0c3b1de00 619 Pfam PF00664 ABC transporter transmembrane region 50 332 3.7E-59 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 386 417 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 Gene3D G3DSA:3.40.50.150 85 450 6.3E-125 T 11-10-2018 UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 93 454 1.2E-20 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 438 448 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 SUPERFAMILY SSF53335 72 454 2.13E-89 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 Gene3D G3DSA:3.40.1350.30 132 287 6.3E-125 T 11-10-2018 UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 Pfam PF01938 TRAM domain 12 62 7.7E-13 T 11-10-2018 IPR002792 TRAM domain UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 SUPERFAMILY SSF50249 3 64 6.85E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 Gene3D G3DSA:2.40.50.140 1 82 1.3E-17 T 11-10-2018 UP17_02085 8cbb497cdcb277f0e075462b1212bb22 456 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 448 6.1E-167 T 11-10-2018 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Gene3D G3DSA:1.10.1160.10 257 335 3.1E-34 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 SUPERFAMILY SSF52374 25 341 4.29E-97 T 11-10-2018 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Gene3D G3DSA:3.40.50.620 25 243 3.2E-101 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 50.659 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 31 42 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 25 548 2.1E-225 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Gene3D G3DSA:2.40.240.10 344 462 8.8E-78 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 336 527 9.5E-58 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 25 333 3.4E-110 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Gene3D G3DSA:2.40.240.10 336 545 8.8E-78 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 Gene3D G3DSA:3.90.800.10 97 205 3.2E-101 T 11-10-2018 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 SUPERFAMILY SSF50715 336 546 2.25E-72 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 57 70 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 40 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_24705 dd525de93dabb2f7f0ebf1bc9c8abac5 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 53 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 UP17_10730 27f1586d581b07a9b51623372e7f6ca1 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 236 3.9E-17 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 UP17_10730 27f1586d581b07a9b51623372e7f6ca1 347 Gene3D G3DSA:3.30.360.10 122 339 1.1E-135 T 11-10-2018 UP17_10730 27f1586d581b07a9b51623372e7f6ca1 347 SUPERFAMILY SSF51735 2 199 2.59E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10730 27f1586d581b07a9b51623372e7f6ca1 347 Gene3D G3DSA:3.40.50.720 5 316 1.1E-135 T 11-10-2018 UP17_10730 27f1586d581b07a9b51623372e7f6ca1 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 6.9E-24 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 UP17_00180 08c467b3250d98d5e92b431dab09d5b6 213 SUPERFAMILY SSF52540 1 210 1.18E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00180 08c467b3250d98d5e92b431dab09d5b6 213 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 UP17_00180 08c467b3250d98d5e92b431dab09d5b6 213 Gene3D G3DSA:3.40.50.300 1 212 2.8E-69 T 11-10-2018 UP17_00180 08c467b3250d98d5e92b431dab09d5b6 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 198 5.2E-65 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 UP17_00180 08c467b3250d98d5e92b431dab09d5b6 213 Pfam PF02223 Thymidylate kinase 10 199 1.9E-57 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 UP17_00180 08c467b3250d98d5e92b431dab09d5b6 213 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 31.2 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 UP17_07630 34dcbd27a1067cfdccfec1486552757a 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 98 3.8E-39 T 11-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like UP17_07630 34dcbd27a1067cfdccfec1486552757a 110 SUPERFAMILY SSF88659 1 96 3.92E-33 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_07630 34dcbd27a1067cfdccfec1486552757a 110 Gene3D G3DSA:1.10.10.10 1 110 1.2E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_07630 34dcbd27a1067cfdccfec1486552757a 110 Hamap MF_00245 UPF0122 protein . 2 103 21.233 T 11-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 337 1.2E-117 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 Pfam PF04055 Radical SAM superfamily 19 183 6.2E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 Pfam PF06463 Molybdenum Cofactor Synthesis C 189 316 5.4E-36 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 Gene3D G3DSA:3.20.20.70 2 337 2.2E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 SMART SM00729 14 222 3.2E-15 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 SUPERFAMILY SSF102114 7 295 5.49E-76 T 11-10-2018 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 337 39.848 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 Pfam PF13353 4Fe-4S single cluster domain 21 127 5.5E-7 T 11-10-2018 UP17_05850 f61b003b7d85eab7b04061df7f7c131b 337 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_20160 f7ec8302fdb19a0cb4542d7ee23e483c 325 Gene3D G3DSA:3.40.50.720 97 287 5.7E-111 T 11-10-2018 UP17_20160 f7ec8302fdb19a0cb4542d7ee23e483c 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 5.0E-64 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UP17_20160 f7ec8302fdb19a0cb4542d7ee23e483c 325 Gene3D G3DSA:3.40.50.720 4 314 5.7E-111 T 11-10-2018 UP17_20160 f7ec8302fdb19a0cb4542d7ee23e483c 325 SUPERFAMILY SSF51735 100 288 5.87E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_20160 f7ec8302fdb19a0cb4542d7ee23e483c 325 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 176 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 UP17_20160 f7ec8302fdb19a0cb4542d7ee23e483c 325 SUPERFAMILY SSF52283 1 133 1.74E-30 T 11-10-2018 UP17_20160 f7ec8302fdb19a0cb4542d7ee23e483c 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 318 6.0E-27 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 UP17_05405 6f830c15550f4c9330bffd498af7ca5a 455 Pfam PF14398 YheC/D like ATP-grasp 187 442 7.7E-81 T 11-10-2018 IPR026838 Endospore coat-associated protein YheC/D UP17_05405 6f830c15550f4c9330bffd498af7ca5a 455 Gene3D G3DSA:3.30.470.20 311 434 3.6E-5 T 11-10-2018 UP17_05405 6f830c15550f4c9330bffd498af7ca5a 455 SUPERFAMILY SSF56059 213 416 1.02E-9 T 11-10-2018 UP17_03170 7ae5055b16e47dddb242a48fae133016 390 Gene3D G3DSA:3.40.710.10 47 390 9.3E-133 T 11-10-2018 UP17_03170 7ae5055b16e47dddb242a48fae133016 390 Pfam PF00144 Beta-lactamase 62 375 1.1E-64 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_03170 7ae5055b16e47dddb242a48fae133016 390 SUPERFAMILY SSF56601 52 374 4.51E-77 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 Gene3D G3DSA:2.40.50.140 3 85 1.1E-22 T 11-10-2018 UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 22 451 9.7E-177 T 11-10-2018 UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 Gene3D G3DSA:3.40.50.150 87 453 1.4E-112 T 11-10-2018 UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 390 421 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 Pfam PF01938 TRAM domain 10 64 2.1E-11 T 11-10-2018 IPR002792 TRAM domain UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 SUPERFAMILY SSF53335 74 453 5.02E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 Gene3D G3DSA:3.40.1350.30 136 291 1.4E-112 T 11-10-2018 UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 216 453 1.8E-20 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 SUPERFAMILY SSF50249 4 64 3.77E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_02805 fbc94ee71bc4233ed5839c5dcec84baa 462 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 441 451 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site UP17_20675 8bd527598d22782041de4878f4c420ac 142 SUPERFAMILY SSF46785 13 138 4.68E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20675 8bd527598d22782041de4878f4c420ac 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 3.4E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20675 8bd527598d22782041de4878f4c420ac 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 3.4E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20675 8bd527598d22782041de4878f4c420ac 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 3.4E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20675 8bd527598d22782041de4878f4c420ac 142 Pfam PF01047 MarR family 33 90 4.7E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20675 8bd527598d22782041de4878f4c420ac 142 Gene3D G3DSA:1.10.10.10 2 140 2.9E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20675 8bd527598d22782041de4878f4c420ac 142 SMART SM00347 26 126 1.2E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_04295 712d1cdde8b06383f8a64d36821b059f 479 Pfam PF00474 Sodium:solute symporter family 33 414 3.7E-50 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_04295 712d1cdde8b06383f8a64d36821b059f 479 Gene3D G3DSA:1.20.1730.10 21 478 1.3E-91 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_04295 712d1cdde8b06383f8a64d36821b059f 479 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 147 172 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_18450 7a05552c8b3746525801dfad0996c195 216 SUPERFAMILY SSF54631 1 130 1.77E-28 T 11-10-2018 UP17_18450 7a05552c8b3746525801dfad0996c195 216 SMART SM00116 81 128 2.6E-6 T 11-10-2018 IPR000644 CBS domain UP17_18450 7a05552c8b3746525801dfad0996c195 216 SMART SM00116 10 58 4.3E-10 T 11-10-2018 IPR000644 CBS domain UP17_18450 7a05552c8b3746525801dfad0996c195 216 Gene3D G3DSA:3.10.580.10 1 162 5.9E-36 T 11-10-2018 UP17_18450 7a05552c8b3746525801dfad0996c195 216 Pfam PF01842 ACT domain 139 199 1.3E-6 T 11-10-2018 IPR002912 ACT domain UP17_18450 7a05552c8b3746525801dfad0996c195 216 Pfam PF00571 CBS domain 76 125 9.5E-6 T 11-10-2018 IPR000644 CBS domain UP17_18450 7a05552c8b3746525801dfad0996c195 216 Pfam PF00571 CBS domain 3 56 1.8E-13 T 11-10-2018 IPR000644 CBS domain UP17_18450 7a05552c8b3746525801dfad0996c195 216 SUPERFAMILY SSF55021 138 207 6.34E-9 T 11-10-2018 UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 12 210 7.5E-4 T 11-10-2018 UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 6.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 6.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 6.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 6.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 6.7E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 Pfam PF00106 short chain dehydrogenase 12 204 8.5E-56 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 4.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 4.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 4.1E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 SUPERFAMILY SSF51735 6 259 1.1E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10200 081a746344c77d6d73d89c1f3f006d18 262 Gene3D G3DSA:3.40.50.720 1 261 1.8E-77 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 SUPERFAMILY SSF51905 1 183 6.05E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 273 1.1E-6 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.1E-6 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.1E-6 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 1.2E-8 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.2E-8 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.2E-8 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 1.2E-8 T 11-10-2018 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 SUPERFAMILY SSF51905 146 300 2.83E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 5.7E-38 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_23010 c6de78ea42b390a4acf7ddb6d0d73465 355 Gene3D G3DSA:3.50.50.100 1 354 3.3E-76 T 11-10-2018 UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 SMART SM00257 26 69 1.7E-15 T 11-10-2018 IPR018392 LysM domain UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 SMART SM00257 160 203 3.3E-13 T 11-10-2018 IPR018392 LysM domain UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 SMART SM00257 89 132 9.7E-16 T 11-10-2018 IPR018392 LysM domain UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Gene3D G3DSA:3.90.1720.10 221 345 3.2E-36 T 11-10-2018 UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 SUPERFAMILY SSF54106 160 202 6.41E-10 T 11-10-2018 UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Pfam PF01476 LysM domain 161 202 1.8E-11 T 11-10-2018 IPR018392 LysM domain UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Pfam PF01476 LysM domain 27 67 4.9E-14 T 11-10-2018 IPR018392 LysM domain UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Pfam PF01476 LysM domain 90 131 2.0E-13 T 11-10-2018 IPR018392 LysM domain UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 SUPERFAMILY SSF54106 88 131 1.44E-10 T 11-10-2018 UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Pfam PF00877 NlpC/P60 family 239 343 2.7E-27 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 SUPERFAMILY SSF54001 222 343 1.05E-34 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Gene3D G3DSA:3.10.350.10 156 209 2.0E-16 T 11-10-2018 IPR036779 LysM domain superfamily UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Gene3D G3DSA:3.10.350.10 24 76 1.0E-17 T 11-10-2018 IPR036779 LysM domain superfamily UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 Gene3D G3DSA:3.10.350.10 85 139 2.9E-18 T 11-10-2018 IPR036779 LysM domain superfamily UP17_23885 fbefc8ce921c5f698011b20f29ce26f3 345 SUPERFAMILY SSF54106 26 67 1.23E-10 T 11-10-2018 UP17_17290 76c502a394edba61ca6550f42c23a54b 627 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 160 170 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site UP17_17290 76c502a394edba61ca6550f42c23a54b 627 Pfam PF00082 Subtilase family 119 365 2.3E-52 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_17290 76c502a394edba61ca6550f42c23a54b 627 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 123 134 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site UP17_17290 76c502a394edba61ca6550f42c23a54b 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 314 330 5.3E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_17290 76c502a394edba61ca6550f42c23a54b 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 118 137 5.3E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_17290 76c502a394edba61ca6550f42c23a54b 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 156 169 5.3E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_17290 76c502a394edba61ca6550f42c23a54b 627 SUPERFAMILY SSF52743 50 375 1.02E-94 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_17290 76c502a394edba61ca6550f42c23a54b 627 Gene3D G3DSA:2.60.40.10 462 538 1.3E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_17290 76c502a394edba61ca6550f42c23a54b 627 Gene3D G3DSA:2.60.40.10 546 622 5.4E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_17290 76c502a394edba61ca6550f42c23a54b 627 Gene3D G3DSA:3.40.50.200 59 378 9.0E-101 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_17290 76c502a394edba61ca6550f42c23a54b 627 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 315 325 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_22025 c2594fb158608828db1f9e706fa1ae3a 267 SUPERFAMILY SSF53474 8 261 2.97E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_22025 c2594fb158608828db1f9e706fa1ae3a 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22025 c2594fb158608828db1f9e706fa1ae3a 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22025 c2594fb158608828db1f9e706fa1ae3a 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22025 c2594fb158608828db1f9e706fa1ae3a 267 Pfam PF12146 Serine aminopeptidase, S33 9 244 1.1E-56 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 UP17_22025 c2594fb158608828db1f9e706fa1ae3a 267 Gene3D G3DSA:3.40.50.1820 1 261 1.1E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 Gene3D G3DSA:3.40.50.10380 1 157 9.5E-77 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 PRINTS PR00072 Malic enzyme signature 77 99 1.0E-8 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 PRINTS PR00072 Malic enzyme signature 156 172 1.0E-8 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 PRINTS PR00072 Malic enzyme signature 187 203 1.0E-8 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 SUPERFAMILY SSF51735 160 405 3.17E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 PIRSF PIRSF000106 36 410 6.9E-84 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 Pfam PF00390 Malic enzyme, N-terminal domain 15 148 2.9E-31 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 Gene3D G3DSA:3.40.50.720 158 412 2.2E-86 T 11-10-2018 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 3.2E-23 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 SUPERFAMILY SSF53223 6 158 4.46E-59 T 11-10-2018 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 SMART SM00919 160 384 1.7E-130 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 UP17_18215 c9055f52abb5c915aa0cfd83d14144c3 413 SMART SM01274 15 148 2.8E-88 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 UP17_09230 fd465c820b790d1f0f33b19156f43b27 115 Gene3D G3DSA:1.10.3730.20 1 108 4.9E-33 T 11-10-2018 UP17_09230 fd465c820b790d1f0f33b19156f43b27 115 Pfam PF00893 Small Multidrug Resistance protein 4 94 7.7E-26 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 UP17_09230 fd465c820b790d1f0f33b19156f43b27 115 SUPERFAMILY SSF103481 7 105 9.29E-19 T 11-10-2018 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 433 35.061 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 Gene3D G3DSA:3.40.50.720 3 89 6.4E-22 T 11-10-2018 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 376 4.0E-17 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 Pfam PF08245 Mur ligase middle domain 106 275 3.1E-23 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 Gene3D G3DSA:3.90.190.20 293 432 8.5E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 SUPERFAMILY SSF53244 294 427 4.21E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 SUPERFAMILY SSF51984 3 88 7.85E-22 T 11-10-2018 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 Pfam PF01225 Mur ligase family, catalytic domain 4 101 1.1E-23 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 Gene3D G3DSA:3.40.1190.10 91 292 3.4E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 425 3.0E-132 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_18490 96ce0a91754366f8ef79e7cd2fdb310a 434 SUPERFAMILY SSF53623 87 293 6.54E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 5 396 1.6E-162 T 11-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 Pfam PF00202 Aminotransferase class-III 16 396 6.2E-128 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 SUPERFAMILY SSF53383 2 396 2.31E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 PIRSF PIRSF000521 176 397 6.8E-30 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 PIRSF PIRSF000521 2 160 2.4E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 Gene3D G3DSA:3.40.640.10 59 307 4.8E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 Hamap MF_01689 Ornithine aminotransferase [rocD]. 5 397 65.844 T 11-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 UP17_19110 2fe81bcc5ca8100d2cdf3068ca0a5510 397 Gene3D G3DSA:3.90.1150.10 24 386 4.8E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_21565 128b74c8963e6394f6edce849c840ae3 239 Pfam PF00805 Pentapeptide repeats (8 copies) 183 215 1.9E-5 T 11-10-2018 IPR001646 Pentapeptide repeat UP17_21565 128b74c8963e6394f6edce849c840ae3 239 Pfam PF13599 Pentapeptide repeats (9 copies) 106 179 2.8E-13 T 11-10-2018 IPR001646 Pentapeptide repeat UP17_21565 128b74c8963e6394f6edce849c840ae3 239 Gene3D G3DSA:2.160.20.100 46 238 4.8E-34 T 11-10-2018 UP17_21565 128b74c8963e6394f6edce849c840ae3 239 SUPERFAMILY SSF141571 80 235 6.18E-31 T 11-10-2018 UP17_01630 d99bc04db9235838e8166603b2e50b2b 379 Pfam PF01098 Cell cycle protein 10 374 1.4E-86 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_01630 d99bc04db9235838e8166603b2e50b2b 379 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 331 355 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_13555 0639721d050ccce29df5a26404b493a5 266 Gene3D G3DSA:3.40.50.1110 34 260 3.8E-34 T 11-10-2018 IPR036514 SGNH hydrolase superfamily UP17_13555 0639721d050ccce29df5a26404b493a5 266 SUPERFAMILY SSF52266 55 260 6.2E-36 T 11-10-2018 UP17_13555 0639721d050ccce29df5a26404b493a5 266 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 62 250 3.3E-26 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.559.30 2272 2479 4.9E-78 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.559.10 1636 1815 5.0E-39 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF00668 Condensation domain 600 1045 1.2E-91 T 11-10-2018 IPR001242 Condensation domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF00668 Condensation domain 2099 2498 1.3E-70 T 11-10-2018 IPR001242 Condensation domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF00668 Condensation domain 1646 2066 1.2E-67 T 11-10-2018 IPR001242 Condensation domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF52777 604 781 2.78E-33 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF00501 AMP-binding enzyme 10 406 2.1E-79 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF00501 AMP-binding enzyme 1069 1459 1.2E-85 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.559.30 785 1030 3.3E-94 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1211 1222 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF47336 513 588 1.96E-10 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.559.10 603 974 3.3E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF52777 790 1029 1.45E-42 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.300.30 1454 1559 1.0E-28 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF56801 5 519 1.44E-117 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF52777 1852 2066 3.89E-21 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.40.50.12780 1054 1453 2.9E-115 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.300.30 400 502 4.0E-25 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.559.10 2103 2456 4.9E-78 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF00550 Phosphopantetheine attachment site 517 580 3.9E-11 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF00550 Phosphopantetheine attachment site 1567 1628 2.0E-8 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 31 430 2.3E-104 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1090 1482 1.8E-120 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF56801 1060 1578 3.66E-131 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1590 1605 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF52777 2103 2270 1.45E-31 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF47336 1562 1630 1.7E-13 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 ProSitePatterns PS00012 Phosphopantetheine attachment site. 540 555 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 PRINTS PR00154 AMP-binding signature 1206 1217 4.9E-5 T 11-10-2018 IPR020459 AMP-binding UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 PRINTS PR00154 AMP-binding signature 1218 1226 4.9E-5 T 11-10-2018 IPR020459 AMP-binding UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.30.559.30 1816 2070 3.4E-36 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:1.10.1200.10 507 593 3.2E-9 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF52777 1650 1825 6.78E-30 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 SUPERFAMILY SSF52777 2278 2500 7.34E-33 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:1.10.1200.10 1563 1635 1.8E-17 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Gene3D G3DSA:3.40.50.12780 4 399 1.9E-102 T 11-10-2018 UP17_03505 e2076717bf2c8c16e093099d6369233c 2507 Pfam PF13193 AMP-binding enzyme C-terminal domain 1467 1540 9.3E-6 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_02055 eb0ee80b6064ae370fadb28065ca070a 486 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 478 96.745 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UP17_02055 eb0ee80b6064ae370fadb28065ca070a 486 Pfam PF01425 Amidase 24 466 5.5E-162 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UP17_02055 eb0ee80b6064ae370fadb28065ca070a 486 SUPERFAMILY SSF75304 1 484 2.75E-168 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UP17_02055 eb0ee80b6064ae370fadb28065ca070a 486 ProSitePatterns PS00571 Amidases signature. 152 183 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 UP17_02055 eb0ee80b6064ae370fadb28065ca070a 486 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 478 2.8E-204 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UP17_02055 eb0ee80b6064ae370fadb28065ca070a 486 Gene3D G3DSA:3.90.1300.10 2 486 1.4E-200 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UP17_22415 b3e1d9ac3aa2d5168705599bc72a7549 199 SUPERFAMILY SSF46689 9 72 4.36E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_22415 b3e1d9ac3aa2d5168705599bc72a7549 199 Pfam PF13305 WHG domain 84 157 1.5E-11 T 11-10-2018 IPR025996 WHG domain UP17_22415 b3e1d9ac3aa2d5168705599bc72a7549 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 47 1.8E-4 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_22415 b3e1d9ac3aa2d5168705599bc72a7549 199 Gene3D G3DSA:1.10.10.60 1 50 1.2E-17 T 11-10-2018 UP17_22415 b3e1d9ac3aa2d5168705599bc72a7549 199 SUPERFAMILY SSF48498 77 184 7.19E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_22415 b3e1d9ac3aa2d5168705599bc72a7549 199 Gene3D G3DSA:1.10.357.10 51 185 4.7E-30 T 11-10-2018 UP17_07720 d3d7606b4264ccc122e7308d8db0597b 288 Gene3D G3DSA:3.40.50.450 6 288 1.3E-88 T 11-10-2018 UP17_07720 d3d7606b4264ccc122e7308d8db0597b 288 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 287 4.0E-74 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 UP17_07720 d3d7606b4264ccc122e7308d8db0597b 288 SUPERFAMILY SSF102405 81 284 4.27E-30 T 11-10-2018 UP17_07720 d3d7606b4264ccc122e7308d8db0597b 288 Pfam PF02481 DNA recombination-mediator protein A 73 279 7.0E-76 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 PIRSF PIRSF006487 1 368 2.4E-103 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 Gene3D G3DSA:2.40.30.110 283 365 1.3E-29 T 11-10-2018 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 SUPERFAMILY SSF101790 276 365 1.21E-24 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 Gene3D G3DSA:4.10.1250.10 239 281 1.5E-17 T 11-10-2018 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 269 359 4.9E-25 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 SUPERFAMILY SSF103025 3 284 1.88E-100 T 11-10-2018 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 365 49.012 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 Gene3D G3DSA:3.30.1360.120 6 238 1.4E-92 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 261 2.2E-96 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 364 1.0E-140 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 UP17_16225 64c86c441c2089b69a3ca8cd0c778f36 368 Gene3D G3DSA:3.30.70.1400 53 138 1.4E-92 T 11-10-2018 UP17_06595 e7f54429059de241770e533b5b8b7e10 67 SMART SM00357 4 67 2.3E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_06595 e7f54429059de241770e533b5b8b7e10 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 3.1E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_06595 e7f54429059de241770e533b5b8b7e10 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 11-10-2018 IPR019844 Cold-shock conserved site UP17_06595 e7f54429059de241770e533b5b8b7e10 67 SUPERFAMILY SSF50249 3 66 9.86E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_06595 e7f54429059de241770e533b5b8b7e10 67 Gene3D G3DSA:2.40.50.140 2 66 2.4E-29 T 11-10-2018 UP17_06595 e7f54429059de241770e533b5b8b7e10 67 PIRSF PIRSF002599 1 67 2.0E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 UP17_06595 e7f54429059de241770e533b5b8b7e10 67 PRINTS PR00050 Cold shock protein signature 25 34 3.7E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_06595 e7f54429059de241770e533b5b8b7e10 67 PRINTS PR00050 Cold shock protein signature 40 58 3.7E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_06595 e7f54429059de241770e533b5b8b7e10 67 PRINTS PR00050 Cold shock protein signature 5 20 3.7E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_01995 cca2c870408873ef89c2d13c4b0120d9 191 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.914 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 UP17_01995 cca2c870408873ef89c2d13c4b0120d9 191 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 189 1.3E-72 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 UP17_01995 cca2c870408873ef89c2d13c4b0120d9 191 SUPERFAMILY SSF53328 2 190 7.33E-62 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_01995 cca2c870408873ef89c2d13c4b0120d9 191 Gene3D G3DSA:3.40.50.170 1 191 3.2E-74 T 11-10-2018 UP17_01995 cca2c870408873ef89c2d13c4b0120d9 191 Pfam PF00551 Formyl transferase 2 182 3.4E-61 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_01995 cca2c870408873ef89c2d13c4b0120d9 191 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_21735 de4827df0187ee87965096cd6472e278 179 Gene3D G3DSA:3.30.460.10 1 169 4.1E-56 T 11-10-2018 UP17_21735 de4827df0187ee87965096cd6472e278 179 Pfam PF04229 GrpB protein 3 162 2.0E-50 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase UP17_21735 de4827df0187ee87965096cd6472e278 179 SUPERFAMILY SSF81301 6 169 2.62E-51 T 11-10-2018 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 258 3.8E-85 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 Gene3D G3DSA:2.60.410.10 279 370 6.2E-20 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 SUPERFAMILY SSF56601 1 279 6.91E-77 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_15755 35c5b86275662e46e454c88faeb034c6 388 SUPERFAMILY SSF69189 271 369 1.96E-18 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 369 9.8E-19 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 Gene3D G3DSA:3.40.710.10 17 278 1.6E-85 T 11-10-2018 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 1.8E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 1.8E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.8E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_15755 35c5b86275662e46e454c88faeb034c6 388 SMART SM00936 279 370 7.8E-22 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_17960 7f5244c9685bd857d550d48f90222022 252 Gene3D G3DSA:3.40.1280.10 97 252 8.6E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UP17_17960 7f5244c9685bd857d550d48f90222022 252 Pfam PF00588 SpoU rRNA Methylase family 109 246 3.1E-36 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 UP17_17960 7f5244c9685bd857d550d48f90222022 252 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 95 9.7E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 UP17_17960 7f5244c9685bd857d550d48f90222022 252 Gene3D G3DSA:3.30.1330.30 3 96 1.0E-24 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_17960 7f5244c9685bd857d550d48f90222022 252 SUPERFAMILY SSF55315 2 95 6.24E-24 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_17960 7f5244c9685bd857d550d48f90222022 252 SUPERFAMILY SSF75217 104 250 9.16E-41 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases UP17_17960 7f5244c9685bd857d550d48f90222022 252 SMART SM00967 31 99 3.9E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 UP17_16535 1825ec06cec187a20bf788f925d38c45 406 SUPERFAMILY SSF103473 14 399 1.11E-27 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_16535 1825ec06cec187a20bf788f925d38c45 406 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_16535 1825ec06cec187a20bf788f925d38c45 406 Pfam PF07690 Major Facilitator Superfamily 22 334 1.3E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_16535 1825ec06cec187a20bf788f925d38c45 406 Gene3D G3DSA:1.20.1250.20 13 397 1.1E-20 T 11-10-2018 UP17_18740 0b923b275642f3688fb1088437b179c0 334 Gene3D G3DSA:3.30.565.10 174 323 2.9E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_18740 0b923b275642f3688fb1088437b179c0 334 SMART SM00387 216 326 1.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_18740 0b923b275642f3688fb1088437b179c0 334 SUPERFAMILY SSF55874 175 323 1.57E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_18740 0b923b275642f3688fb1088437b179c0 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 323 2.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18740 0b923b275642f3688fb1088437b179c0 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 2.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18740 0b923b275642f3688fb1088437b179c0 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 2.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18740 0b923b275642f3688fb1088437b179c0 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 2.1E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18740 0b923b275642f3688fb1088437b179c0 334 Gene3D G3DSA:1.10.287.130 123 169 2.9E-30 T 11-10-2018 UP17_18740 0b923b275642f3688fb1088437b179c0 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 325 2.2E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 Gene3D G3DSA:3.40.50.970 6 190 2.3E-54 T 11-10-2018 UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 SUPERFAMILY SSF52518 10 187 9.61E-47 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 404 551 2.8E-40 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 Gene3D G3DSA:3.40.50.970 374 567 9.3E-57 T 11-10-2018 UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 TIGRFAM TIGR03457 sulphoacet_xsc: sulfoacetaldehyde acetyltransferase 13 577 2.1E-256 T 11-10-2018 IPR017820 Sulphoacetaldehyde acetyltransferase GO:0000287|GO:0005737|GO:0019529|GO:0030976|GO:0050487 KEGG: 00430+2.3.3.15|MetaCyc: PWY-1281|MetaCyc: PWY-6637 UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 Gene3D G3DSA:3.40.50.1220 197 373 6.1E-46 T 11-10-2018 UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 180 2.4E-47 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 337 6.5E-36 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 SUPERFAMILY SSF52467 196 386 6.55E-41 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 SUPERFAMILY SSF52518 381 564 5.11E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_09740 004209cf4ccd4c5c27e507d39b84557a 587 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 441 460 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 7.5E-47 T 11-10-2018 UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 SUPERFAMILY SSF51735 3 246 1.17E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.4E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.6E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.6E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.6E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.6E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14095 cc906d38212397c65e8db6c1d3bcc68d 257 Gene3D G3DSA:3.40.50.720 1 253 1.2E-66 T 11-10-2018 UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 Pfam PF13378 Enolase C-terminal domain-like 148 354 2.4E-39 T 11-10-2018 IPR029065 Enolase C-terminal domain-like UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 SUPERFAMILY SSF54826 1 126 1.09E-29 T 11-10-2018 UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 SUPERFAMILY SSF51604 115 361 9.04E-59 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 Gene3D G3DSA:3.20.20.120 118 346 3.6E-125 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 359 41.58 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 11 332 4.4E-112 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 SMART SM00922 142 234 1.6E-15 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 125 3.9E-10 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain UP17_22170 d706fd111b2767c34cf98e7736f2ee0a 367 Gene3D G3DSA:3.30.390.10 11 357 3.6E-125 T 11-10-2018 IPR029017 Enolase-like, N-terminal UP17_08465 dbb9d9cca4f63b1d4ea6acfe2866aa78 64 Pfam PF13751 Transposase DDE domain 5 53 1.8E-15 T 11-10-2018 IPR025668 Transposase DDE domain UP17_11295 620417915ad004bf2d857a0209e55367 346 Pfam PF02126 Phosphotriesterase family 22 328 1.0E-39 T 11-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 UP17_11295 620417915ad004bf2d857a0209e55367 346 Gene3D G3DSA:3.20.20.140 8 345 7.0E-77 T 11-10-2018 UP17_11295 620417915ad004bf2d857a0209e55367 346 SUPERFAMILY SSF51556 23 328 2.64E-45 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.5E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.5E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.5E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 Gene3D G3DSA:2.40.50.140 6 86 2.6E-34 T 11-10-2018 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 3.0E-34 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 2.0E-24 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 23.348 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 Pfam PF00366 Ribosomal protein S17 12 79 4.2E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00735 c5d873172a51a482ab7eda1c65b3f75e 87 SUPERFAMILY SSF50249 7 84 1.67E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 Gene3D G3DSA:1.10.540.10 1 120 4.8E-44 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 PIRSF PIRSF016578 4 364 2.1E-20 T 11-10-2018 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 7.1E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 2.9E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 SUPERFAMILY SSF56645 1 243 2.36E-85 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 Gene3D G3DSA:1.20.140.10 235 379 1.5E-56 T 11-10-2018 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 Gene3D G3DSA:2.40.110.10 121 234 8.0E-41 T 11-10-2018 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 2.4E-51 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_11090 0a16e31c7238bbba24b1cdbfc4da7685 380 SUPERFAMILY SSF47203 229 378 2.99E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 Gene3D G3DSA:3.40.50.1000 375 652 7.6E-86 T 11-10-2018 IPR023214 HAD superfamily UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 SUPERFAMILY SSF81653 196 293 5.75E-24 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 391 611 2.4E-46 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 SUPERFAMILY SSF81665 144 688 3.01E-21 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 SUPERFAMILY SSF56784 393 700 6.19E-55 T 11-10-2018 IPR036412 HAD-like superfamily UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 Pfam PF00122 E1-E2 ATPase 195 374 1.1E-52 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 143 702 1.6E-184 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 166 684 6.4E-86 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 SUPERFAMILY SSF55008 7 59 6.94E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 396 402 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 125 701 2.9E-119 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 144 461 2.9E-96 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 Gene3D G3DSA:2.70.150.20 181 297 4.1E-33 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 Pfam PF00403 Heavy-metal-associated domain 8 58 4.2E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 Gene3D G3DSA:3.30.70.100 6 73 5.5E-15 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 Gene3D G3DSA:3.40.1110.10 405 530 7.6E-86 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 9 18 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 124 136 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 20 41 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 178 198 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 198 214 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 278 292 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 42 65 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00941 Cadmium-transporting ATPase signature 259 275 2.7E-61 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 618 4.8E-22 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 243 257 4.8E-22 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 534 4.8E-22 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 394 408 4.8E-22 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 556 4.8E-22 T 11-10-2018 UP17_01055 9bc1b9747e758d1800dc1455059ac070 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 635 4.8E-22 T 11-10-2018 UP17_20765 e789fa0cbbd28c1ecd2c3f31bbcab04d 679 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 8 182 1.3E-49 T 11-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 UP17_20765 e789fa0cbbd28c1ecd2c3f31bbcab04d 679 SUPERFAMILY SSF53067 9 483 6.95E-7 T 11-10-2018 UP17_20765 e789fa0cbbd28c1ecd2c3f31bbcab04d 679 Pfam PF01968 Hydantoinase/oxoprolinase 203 489 3.6E-89 T 11-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 Gene3D G3DSA:2.40.50.140 64 127 9.9E-27 T 11-10-2018 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.5E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 SUPERFAMILY SSF50104 1 62 1.02E-21 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 SUPERFAMILY SSF50249 128 185 1.14E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 119 5.7E-23 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 PIRSF PIRSF005901 1 185 6.5E-72 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 Gene3D G3DSA:2.30.30.30 1 62 1.3E-31 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 3.2E-28 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 Gene3D G3DSA:2.40.50.140 128 185 3.8E-26 T 11-10-2018 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 SMART SM01185 67 121 1.3E-25 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 5.0E-81 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 SUPERFAMILY SSF50249 65 129 1.54E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 SMART SM00841 129 184 3.5E-33 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UP17_16155 ecee14d8c53da4c3f173131ffe8a4c21 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.428 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UP17_22765 0de77d1f332a5f363d18c470fbda3b58 323 SUPERFAMILY SSF51735 109 244 1.67E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_22765 0de77d1f332a5f363d18c470fbda3b58 323 Gene3D G3DSA:1.10.287.70 2 92 1.5E-21 T 11-10-2018 UP17_22765 0de77d1f332a5f363d18c470fbda3b58 323 Gene3D G3DSA:3.40.50.720 108 248 6.9E-25 T 11-10-2018 UP17_22765 0de77d1f332a5f363d18c470fbda3b58 323 Pfam PF02254 TrkA-N domain 111 232 2.8E-15 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 UP17_22765 0de77d1f332a5f363d18c470fbda3b58 323 SUPERFAMILY SSF81324 8 132 6.8E-26 T 11-10-2018 UP17_22765 0de77d1f332a5f363d18c470fbda3b58 323 Pfam PF07885 Ion channel 17 90 2.4E-15 T 11-10-2018 IPR013099 Potassium channel domain UP17_07390 104dae3e1c232d38bede698bf9c8facf 88 Pfam PF02325 YGGT family 9 76 3.2E-25 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 UP17_00245 937bf69b44d2db60c2eeeb7731a0b6eb 187 SUPERFAMILY SSF110455 1 115 7.32E-34 T 11-10-2018 UP17_00245 937bf69b44d2db60c2eeeb7731a0b6eb 187 Gene3D G3DSA:3.40.1360.20 1 119 9.4E-23 T 11-10-2018 UP17_00245 937bf69b44d2db60c2eeeb7731a0b6eb 187 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 3 175 1.6E-58 T 11-10-2018 IPR004466 Ribonuclease M5 GO:0043822 UP17_00245 937bf69b44d2db60c2eeeb7731a0b6eb 187 Pfam PF13331 Domain of unknown function (DUF4093) 94 177 5.3E-29 T 11-10-2018 IPR025156 Ribonuclease M5, C-terminal domain UP17_00245 937bf69b44d2db60c2eeeb7731a0b6eb 187 Pfam PF13662 Toprim domain 5 73 1.1E-6 T 11-10-2018 IPR006171 TOPRIM domain UP17_00245 937bf69b44d2db60c2eeeb7731a0b6eb 187 SMART SM00493 5 78 8.9E-7 T 11-10-2018 IPR006171 TOPRIM domain UP17_00245 937bf69b44d2db60c2eeeb7731a0b6eb 187 Hamap MF_01469 Ribonuclease M5 [rnmV]. 4 179 31.68 T 11-10-2018 IPR004466 Ribonuclease M5 GO:0043822 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 Gene3D G3DSA:3.10.50.30 80 158 7.5E-27 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 2.5E-31 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 2.0E-59 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 SUPERFAMILY SSF46557 5 79 3.4E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 Gene3D G3DSA:1.10.287.180 5 78 2.8E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 PIRSF PIRSF006092 1 158 4.2E-52 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 SUPERFAMILY SSF54534 84 157 1.83E-21 T 11-10-2018 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 32.801 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 UP17_16950 ad566d90680d15e1a11aeb8639c2bdb6 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 158 2.3E-27 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 UP17_18155 56c68ae6a08e9931958d6be33bb57f46 423 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 422 6.4E-220 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 UP17_18155 56c68ae6a08e9931958d6be33bb57f46 423 SMART SM01329 21 418 4.9E-189 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 UP17_18155 56c68ae6a08e9931958d6be33bb57f46 423 SUPERFAMILY SSF53659 2 423 2.7E-143 T 11-10-2018 UP17_18155 56c68ae6a08e9931958d6be33bb57f46 423 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 417 3.1E-123 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 UP17_18155 56c68ae6a08e9931958d6be33bb57f46 423 Gene3D G3DSA:3.40.718.10 1 423 1.9E-182 T 11-10-2018 UP17_18155 56c68ae6a08e9931958d6be33bb57f46 423 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 307 326 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 185 8.2E-35 T 11-10-2018 UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 SUPERFAMILY SSF51905 166 322 2.04E-7 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.9E-7 T 11-10-2018 UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 121 139 5.9E-7 T 11-10-2018 UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 5.9E-7 T 11-10-2018 UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 SUPERFAMILY SSF51905 3 184 2.04E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 Gene3D G3DSA:3.50.50.60 2 345 1.1E-88 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 5.3E-9 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 5.3E-9 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_21140 5e9321c980fe25e218673eb4bdbf7189 345 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 161 185 5.3E-9 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 120 2.5E-27 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 SUPERFAMILY SSF56645 7 246 3.01E-74 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 Gene3D G3DSA:1.20.140.10 238 382 1.1E-34 T 11-10-2018 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 233 381 1.2E-33 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 Gene3D G3DSA:1.10.540.10 2 122 2.9E-29 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 Gene3D G3DSA:2.40.110.10 123 237 1.6E-39 T 11-10-2018 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 SUPERFAMILY SSF47203 231 381 8.38E-37 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_12365 729ca38b5bd8b67b8bb6829b9fb62565 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 220 5.5E-23 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_02845 d5c3834402c390a3f2087aeb79dfe03d 306 Hamap MF_00215 Pantothenate kinase [coaA]. 1 306 166.669 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 UP17_02845 d5c3834402c390a3f2087aeb79dfe03d 306 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 5 306 2.5E-135 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 UP17_02845 d5c3834402c390a3f2087aeb79dfe03d 306 Gene3D G3DSA:3.40.50.300 1 306 2.8E-96 T 11-10-2018 UP17_02845 d5c3834402c390a3f2087aeb79dfe03d 306 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 85 222 5.4E-13 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 UP17_02845 d5c3834402c390a3f2087aeb79dfe03d 306 PIRSF PIRSF000545 1 306 5.8E-146 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 UP17_02845 d5c3834402c390a3f2087aeb79dfe03d 306 SUPERFAMILY SSF52540 1 306 9.46E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 SUPERFAMILY SSF56235 12 237 9.44E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 Gene3D G3DSA:3.60.20.10 12 459 7.1E-172 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 Pfam PF00156 Phosphoribosyl transferase domain 279 385 2.1E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 458 1.9E-169 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 Pfam PF13537 Glutamine amidotransferase domain 96 210 9.2E-24 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 Gene3D G3DSA:3.40.50.2020 272 436 7.1E-172 T 11-10-2018 UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 SUPERFAMILY SSF53271 248 465 3.54E-77 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 PIRSF PIRSF000485 8 470 1.1E-187 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 UP17_01985 21eb25776ccd96dbda926b0bbc9b311b 471 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 457 47.981 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 Gene3D G3DSA:3.20.20.80 1 469 8.8E-175 T 11-10-2018 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 SUPERFAMILY SSF51445 1 467 8.21E-170 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_06300 74a08948aa67d6762a24a7690e300c31 469 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site UP17_06300 74a08948aa67d6762a24a7690e300c31 469 TIGRFAM TIGR03356 BGL: beta-galactosidase 3 458 7.0E-145 T 11-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 Pfam PF00232 Glycosyl hydrolase family 1 2 466 1.1E-167 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.0E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 1.0E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 1.0E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 1.0E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 UP17_06300 74a08948aa67d6762a24a7690e300c31 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 1.0E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 UP17_09835 2af1a6d92e63028e913617bb1c1c4921 318 Pfam PF00892 EamA-like transporter family 6 139 6.0E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09835 2af1a6d92e63028e913617bb1c1c4921 318 Pfam PF00892 EamA-like transporter family 152 294 3.4E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09835 2af1a6d92e63028e913617bb1c1c4921 318 SUPERFAMILY SSF103481 212 298 2.09E-10 T 11-10-2018 UP17_09835 2af1a6d92e63028e913617bb1c1c4921 318 SUPERFAMILY SSF103481 41 140 3.92E-9 T 11-10-2018 UP17_17405 66d68969465bdedb7920d83c8d8c67e9 520 PIRSF PIRSF038958 1 514 3.1E-168 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type UP17_17405 66d68969465bdedb7920d83c8d8c67e9 520 Pfam PF01943 Polysaccharide biosynthesis protein 4 304 1.4E-58 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 UP17_17405 66d68969465bdedb7920d83c8d8c67e9 520 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 4 491 1.1E-172 T 11-10-2018 IPR014249 Sporulation stage V protein B UP17_17405 66d68969465bdedb7920d83c8d8c67e9 520 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 358 497 9.3E-17 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain UP17_07410 70a02242020a3075df5943455f071e1c 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 16.607 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 UP17_07410 70a02242020a3075df5943455f071e1c 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 3.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 UP17_07410 70a02242020a3075df5943455f071e1c 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 3.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 UP17_07410 70a02242020a3075df5943455f071e1c 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 3.3E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 UP17_07410 70a02242020a3075df5943455f071e1c 156 TIGRFAM TIGR00077 lspA: signal peptidase II 1 152 3.4E-50 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 UP17_07410 70a02242020a3075df5943455f071e1c 156 Pfam PF01252 Signal peptidase (SPase) II 6 144 6.1E-39 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 UP17_07410 70a02242020a3075df5943455f071e1c 156 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 UP17_10285 dc2e8144d4da0c0546df762a5ac247d1 366 Pfam PF03845 Spore germination protein 9 320 3.1E-56 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_10285 dc2e8144d4da0c0546df762a5ac247d1 366 Gene3D G3DSA:1.20.1740.10 3 365 8.5E-8 T 11-10-2018 UP17_10285 dc2e8144d4da0c0546df762a5ac247d1 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 8 360 6.6E-64 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 Pfam PF01037 Lrp/AsnC ligand binding domain 79 148 7.2E-14 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 SUPERFAMILY SSF46785 12 71 1.77E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 Gene3D G3DSA:1.10.10.10 9 63 4.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 SMART SM00344 12 118 6.8E-39 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 SUPERFAMILY SSF54909 73 156 5.36E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 2.0E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 2.0E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 2.0E-10 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 Gene3D G3DSA:3.30.70.920 64 158 3.4E-17 T 11-10-2018 UP17_04805 5a37b8a8dd37218a6b326f959262834a 158 Pfam PF13404 AsnC-type helix-turn-helix domain 13 52 4.8E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_24965 cfdd0276072fd99195d049f5c6deade6 176 PIRSF PIRSF002070 1 161 2.0E-41 T 11-10-2018 UP17_24965 cfdd0276072fd99195d049f5c6deade6 176 SUPERFAMILY SSF50249 1 176 3.05E-59 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_24965 cfdd0276072fd99195d049f5c6deade6 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 176 2.5E-49 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 UP17_24965 cfdd0276072fd99195d049f5c6deade6 176 Gene3D G3DSA:2.40.50.140 1 112 8.7E-46 T 11-10-2018 UP17_24965 cfdd0276072fd99195d049f5c6deade6 176 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.348 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 UP17_24965 cfdd0276072fd99195d049f5c6deade6 176 Pfam PF00436 Single-strand binding protein family 2 103 6.1E-37 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 UP17_24365 65b9b8b1f7376c1ae0894de848f4fd04 292 PIRSF PIRSF036979 1 291 5.3E-97 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_24365 65b9b8b1f7376c1ae0894de848f4fd04 292 SUPERFAMILY SSF52768 12 290 2.7E-84 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_24365 65b9b8b1f7376c1ae0894de848f4fd04 292 Gene3D G3DSA:3.40.800.10 17 291 1.0E-93 T 11-10-2018 UP17_24365 65b9b8b1f7376c1ae0894de848f4fd04 292 Pfam PF00491 Arginase family 23 285 4.4E-79 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_24365 65b9b8b1f7376c1ae0894de848f4fd04 292 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 UP17_24365 65b9b8b1f7376c1ae0894de848f4fd04 292 TIGRFAM TIGR01230 agmatinase: agmatinase 11 286 1.3E-118 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 UP17_00690 53467836a40f83d7934bfcf6f63862a3 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 38.955 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00690 53467836a40f83d7934bfcf6f63862a3 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 7.5E-86 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00690 53467836a40f83d7934bfcf6f63862a3 209 Gene3D G3DSA:2.40.30.10 132 209 4.6E-16 T 11-10-2018 UP17_00690 53467836a40f83d7934bfcf6f63862a3 209 Pfam PF00297 Ribosomal protein L3 97 180 2.4E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00690 53467836a40f83d7934bfcf6f63862a3 209 SUPERFAMILY SSF50447 1 207 2.38E-80 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_00690 53467836a40f83d7934bfcf6f63862a3 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site UP17_00690 53467836a40f83d7934bfcf6f63862a3 209 Gene3D G3DSA:2.40.50.620 32 95 8.4E-17 T 11-10-2018 UP17_15075 5640d9e1bdb032ab0758cbf1ac9f8377 199 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.058 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 UP17_15075 5640d9e1bdb032ab0758cbf1ac9f8377 199 Pfam PF00156 Phosphoribosyl transferase domain 44 156 5.2E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_15075 5640d9e1bdb032ab0758cbf1ac9f8377 199 SUPERFAMILY SSF53271 1 179 9.23E-45 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_15075 5640d9e1bdb032ab0758cbf1ac9f8377 199 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 191 4.8E-80 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 UP17_15075 5640d9e1bdb032ab0758cbf1ac9f8377 199 Gene3D G3DSA:3.40.50.2020 3 188 2.6E-52 T 11-10-2018 UP17_05840 f6751255832a1d26ffa064629c4faae1 262 SUPERFAMILY SSF53474 26 255 9.46E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_05840 f6751255832a1d26ffa064629c4faae1 262 Pfam PF00326 Prolyl oligopeptidase family 45 255 3.8E-19 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 UP17_05840 f6751255832a1d26ffa064629c4faae1 262 Gene3D G3DSA:3.40.50.1820 1 256 4.7E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_21360 399aa160bdb6ab951de03d65712fa653 271 Hamap MF_02077 Lipid II flippase Amj [amj]. 5 268 26.863 T 11-10-2018 IPR021260 Lipid II flippase Amj UP17_21360 399aa160bdb6ab951de03d65712fa653 271 Pfam PF10997 Alternate to MurJ 14 267 6.9E-99 T 11-10-2018 IPR021260 Lipid II flippase Amj UP17_12635 d696c0607761596e9c3f086cbcb57214 126 Gene3D G3DSA:3.10.180.10 1 126 1.6E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_12635 d696c0607761596e9c3f086cbcb57214 126 SUPERFAMILY SSF54593 5 124 1.11E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_01820 8ed6a6a388bcacc7f8da0511666befa1 304 SUPERFAMILY SSF53590 2 303 3.4E-92 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like UP17_01820 8ed6a6a388bcacc7f8da0511666befa1 304 Gene3D G3DSA:3.90.245.10 2 304 3.3E-105 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like UP17_01820 8ed6a6a388bcacc7f8da0511666befa1 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 297 9.2E-90 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 SUPERFAMILY SSF81886 571 825 4.97E-78 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Pfam PF07517 SecA DEAD-like domain 6 382 2.4E-126 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 SUPERFAMILY SSF81767 225 348 1.31E-47 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 SMART SM00957 5 382 7.2E-281 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Pfam PF07516 SecA Wing and Scaffold domain 568 777 6.9E-65 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Pfam PF02810 SEC-C motif 817 834 2.8E-9 T 11-10-2018 IPR004027 SEC-C motif UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 11-10-2018 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 780 19.429 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Pfam PF01043 SecA preprotein cross-linking domain 230 338 2.5E-41 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Gene3D G3DSA:1.10.1200.230 621 704 0.0 T 11-10-2018 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 SUPERFAMILY SSF52540 5 395 1.24E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 SMART SM00958 226 338 1.2E-67 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Gene3D G3DSA:1.10.3060.10 571 772 0.0 T 11-10-2018 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Gene3D G3DSA:3.10.450.50 773 836 3.4E-8 T 11-10-2018 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 11-10-2018 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 11-10-2018 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 ProSitePatterns PS01312 SecA family signature. 480 495 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 PRINTS PR00906 SecA protein signature 61 85 1.3E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 PRINTS PR00906 SecA protein signature 115 125 1.3E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 PRINTS PR00906 SecA protein signature 393 406 1.3E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 PRINTS PR00906 SecA protein signature 99 113 1.3E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 PRINTS PR00906 SecA protein signature 168 188 1.3E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 PRINTS PR00906 SecA protein signature 319 341 1.3E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 PRINTS PR00906 SecA protein signature 356 373 1.3E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 4.9E-238 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 UP17_23705 f98d60fcaa244a5c739e27f8866c354f 837 SUPERFAMILY SSF52540 397 569 2.98E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_14775 fa2a1216ac11526c15bd86b36eef69cd 429 PIRSF PIRSF006351 1 426 8.4E-151 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 UP17_14775 fa2a1216ac11526c15bd86b36eef69cd 429 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 417 3.3E-125 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 UP17_14775 fa2a1216ac11526c15bd86b36eef69cd 429 Pfam PF02378 Phosphotransferase system, EIIC 29 343 7.6E-56 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 2.9E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 2.9E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 2.9E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 Gene3D G3DSA:2.10.109.10 59 186 5.6E-48 T 11-10-2018 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 177 2.0E-54 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 SUPERFAMILY SSF51306 27 182 3.98E-52 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily UP17_05695 f89e21ed1d79719dddf1d4f2d355d73f 187 Pfam PF00717 Peptidase S24-like 36 103 3.0E-18 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 SUPERFAMILY SSF55124 347 423 5.89E-22 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 480 496 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 SUPERFAMILY SSF55124 14 145 1.34E-32 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 436 560 0.054 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 170 331 6.6E-47 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 SUPERFAMILY SSF56014 146 345 2.62E-59 T 11-10-2018 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 17 561 7.9E-280 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 7 572 57.674 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 Gene3D G3DSA:3.30.413.10 428 569 5.3E-36 T 11-10-2018 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 418 2.8E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 75 136 4.2E-14 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 SUPERFAMILY SSF56014 430 562 3.66E-32 T 11-10-2018 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 PRINTS PR00397 Sirohaem Fe-binding site signature 432 450 2.3E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_11050 4674f11b80e093880726e4dcfafbb9fb 572 PRINTS PR00397 Sirohaem Fe-binding site signature 480 498 2.3E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_06735 eeabb51068b598fcb62eb73e54dbccfd 407 Gene3D G3DSA:1.20.1250.20 11 200 4.3E-20 T 11-10-2018 UP17_06735 eeabb51068b598fcb62eb73e54dbccfd 407 SUPERFAMILY SSF103473 16 395 4.19E-52 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_06735 eeabb51068b598fcb62eb73e54dbccfd 407 Gene3D G3DSA:1.20.1250.20 221 396 5.5E-21 T 11-10-2018 UP17_06735 eeabb51068b598fcb62eb73e54dbccfd 407 Pfam PF07690 Major Facilitator Superfamily 24 361 4.2E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_06735 eeabb51068b598fcb62eb73e54dbccfd 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 278 294 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_16680 9aee29a5b0686017f95bb4884adca6ac 132 SUPERFAMILY SSF53927 3 130 1.19E-49 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 UP17_16680 9aee29a5b0686017f95bb4884adca6ac 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 130 1.1E-47 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 UP17_16680 9aee29a5b0686017f95bb4884adca6ac 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 UP17_16680 9aee29a5b0686017f95bb4884adca6ac 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 101 1.6E-16 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain UP17_16680 9aee29a5b0686017f95bb4884adca6ac 132 Gene3D G3DSA:3.40.140.10 1 132 9.0E-59 T 11-10-2018 UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 Gene3D G3DSA:3.10.350.10 182 229 7.9E-15 T 11-10-2018 IPR036779 LysM domain superfamily UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 SMART SM00646 64 172 1.7E-41 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 SUPERFAMILY SSF54106 184 228 4.05E-9 T 11-10-2018 UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 Gene3D G3DSA:3.40.630.40 1 174 8.8E-53 T 11-10-2018 UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 Pfam PF01476 LysM domain 186 228 3.1E-12 T 11-10-2018 IPR018392 LysM domain UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 1.4E-42 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 SMART SM00257 185 229 7.8E-10 T 11-10-2018 IPR018392 LysM domain UP17_09255 d01fdfeaef386cc60fccfbebbd31324c 229 SUPERFAMILY SSF53187 1 177 3.11E-51 T 11-10-2018 UP17_23555 60237b62bce311dc6e02ec912561b0f1 210 PIRSF PIRSF000495 1 206 3.2E-74 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UP17_23555 60237b62bce311dc6e02ec912561b0f1 210 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 35.954 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UP17_23555 60237b62bce311dc6e02ec912561b0f1 210 SUPERFAMILY SSF52317 2 204 8.06E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_23555 60237b62bce311dc6e02ec912561b0f1 210 Gene3D G3DSA:3.40.50.880 1 209 1.2E-71 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_23555 60237b62bce311dc6e02ec912561b0f1 210 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 202 1.3E-67 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UP17_23555 60237b62bce311dc6e02ec912561b0f1 210 Pfam PF00117 Glutamine amidotransferase class-I 18 199 1.9E-17 T 11-10-2018 IPR017926 Glutamine amidotransferase UP17_24110 ea96ca780a44cffb953ac4848beb42be 139 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 7 122 2.7E-35 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24110 ea96ca780a44cffb953ac4848beb42be 139 Gene3D G3DSA:3.30.70.3270 24 139 1.4E-32 T 11-10-2018 UP17_24110 ea96ca780a44cffb953ac4848beb42be 139 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 131 22.891 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24110 ea96ca780a44cffb953ac4848beb42be 139 Pfam PF12838 4Fe-4S dicluster domain 45 102 1.6E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_24110 ea96ca780a44cffb953ac4848beb42be 139 SUPERFAMILY SSF54862 24 126 1.26E-25 T 11-10-2018 UP17_24110 ea96ca780a44cffb953ac4848beb42be 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_03455 8deed9d25a2f96b7121eb0efadc48b68 186 SUPERFAMILY SSF52833 43 129 6.52E-8 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_03455 8deed9d25a2f96b7121eb0efadc48b68 186 Gene3D G3DSA:3.40.30.10 1 161 2.2E-19 T 11-10-2018 UP17_03455 8deed9d25a2f96b7121eb0efadc48b68 186 Pfam PF14595 Thioredoxin 12 138 2.3E-39 T 11-10-2018 UP17_15890 61e9dfd3883fe557376adf5d32f832cd 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 280 1.1E-25 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 2.7E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 Pfam PF00072 Response regulator receiver domain 4 116 1.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 SUPERFAMILY SSF46894 147 213 1.94E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 Gene3D G3DSA:3.40.50.12740 2 213 2.5E-67 T 11-10-2018 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 SUPERFAMILY SSF52172 2 134 1.99E-31 T 11-10-2018 IPR011006 CheY-like superfamily UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 SMART SM00448 2 116 4.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 SMART SM00421 150 207 2.1E-25 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.4E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.4E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.4E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_09965 ebfe2f86fb44a06db9f8343793ed3545 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_12405 5d73695ee79311b2f914ff6601729800 94 Pfam PF01527 Transposase 4 81 3.3E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_12405 5d73695ee79311b2f914ff6601729800 94 SUPERFAMILY SSF46689 6 91 7.77E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_12405 5d73695ee79311b2f914ff6601729800 94 Gene3D G3DSA:1.10.10.60 10 89 9.0E-6 T 11-10-2018 UP17_04310 36eb2b01c824f2f792e68e545d595ccd 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_04310 36eb2b01c824f2f792e68e545d595ccd 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.8E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_04310 36eb2b01c824f2f792e68e545d595ccd 190 SUPERFAMILY SSF46689 7 74 1.35E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_04310 36eb2b01c824f2f792e68e545d595ccd 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 58 7.3E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_04310 36eb2b01c824f2f792e68e545d595ccd 190 SUPERFAMILY SSF48498 78 187 2.03E-21 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_04310 36eb2b01c824f2f792e68e545d595ccd 190 Gene3D G3DSA:1.10.357.10 1 190 2.5E-57 T 11-10-2018 UP17_13865 6179fcbd46421af6fa4997e925781044 480 Gene3D G3DSA:3.40.605.10 16 474 2.0E-149 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_13865 6179fcbd46421af6fa4997e925781044 480 SUPERFAMILY SSF53720 11 479 8.25E-143 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_13865 6179fcbd46421af6fa4997e925781044 480 Gene3D G3DSA:3.40.309.10 258 445 2.0E-149 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_13865 6179fcbd46421af6fa4997e925781044 480 Pfam PF00171 Aldehyde dehydrogenase family 20 475 1.4E-152 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_07960 24b4256ffcbb0d263ea6c92707ce4526 422 Pfam PF13180 PDZ domain 210 268 1.3E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_07960 24b4256ffcbb0d263ea6c92707ce4526 422 Pfam PF02163 Peptidase family M50 9 408 3.6E-78 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 UP17_07960 24b4256ffcbb0d263ea6c92707ce4526 422 SUPERFAMILY SSF50156 176 269 4.34E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_07960 24b4256ffcbb0d263ea6c92707ce4526 422 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 421 6.8E-110 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 UP17_07960 24b4256ffcbb0d263ea6c92707ce4526 422 SMART SM00228 187 261 1.8E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_07960 24b4256ffcbb0d263ea6c92707ce4526 422 Gene3D G3DSA:2.30.42.10 205 294 9.2E-22 T 11-10-2018 UP17_15865 a38ed2bb913ac42ea66a020cd7caa494 322 SUPERFAMILY SSF56281 7 309 9.7E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_15865 a38ed2bb913ac42ea66a020cd7caa494 322 Gene3D G3DSA:3.60.15.10 5 262 5.1E-51 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_15865 a38ed2bb913ac42ea66a020cd7caa494 322 SMART SM00849 21 234 4.0E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_15865 a38ed2bb913ac42ea66a020cd7caa494 322 Pfam PF00753 Metallo-beta-lactamase superfamily 20 234 1.9E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_02810 225805a0d11e08a1b4651ea73c731ec7 320 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 UP17_02810 225805a0d11e08a1b4651ea73c731ec7 320 Pfam PF01207 Dihydrouridine synthase (Dus) 15 314 1.6E-51 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 UP17_02810 225805a0d11e08a1b4651ea73c731ec7 320 Gene3D G3DSA:3.20.20.70 13 248 9.7E-64 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_02810 225805a0d11e08a1b4651ea73c731ec7 320 SUPERFAMILY SSF51395 13 316 6.87E-62 T 11-10-2018 UP17_02810 225805a0d11e08a1b4651ea73c731ec7 320 PIRSF PIRSF006621 1 320 9.4E-84 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 UP17_17955 f4aa0deda9f0bd8c991893d2d7aa1c29 346 SUPERFAMILY SSF55681 93 342 8.87E-84 T 11-10-2018 UP17_17955 f4aa0deda9f0bd8c991893d2d7aa1c29 346 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 7.4E-115 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 UP17_17955 f4aa0deda9f0bd8c991893d2d7aa1c29 346 Gene3D G3DSA:3.30.930.10 8 344 1.8E-127 T 11-10-2018 UP17_17955 f4aa0deda9f0bd8c991893d2d7aa1c29 346 SUPERFAMILY SSF46589 13 100 1.41E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 UP17_17955 f4aa0deda9f0bd8c991893d2d7aa1c29 346 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 7.4E-109 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 UP17_17955 f4aa0deda9f0bd8c991893d2d7aa1c29 346 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 3.4E-26 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 UP17_17955 f4aa0deda9f0bd8c991893d2d7aa1c29 346 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 49.844 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 UP17_03335 8cfb27e042ea91e1f035a87108059785 107 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 8.8E-47 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03335 8cfb27e042ea91e1f035a87108059785 107 Pfam PF00699 Urease beta subunit 3 99 2.7E-43 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03335 8cfb27e042ea91e1f035a87108059785 107 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.666 T 11-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03335 8cfb27e042ea91e1f035a87108059785 107 SUPERFAMILY SSF51278 1 104 2.88E-46 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_03335 8cfb27e042ea91e1f035a87108059785 107 Gene3D G3DSA:2.10.150.10 1 107 2.4E-48 T 11-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 UP17_21755 96455abc4461c7ac9a145203aed104c3 200 Pfam PF09335 SNARE associated Golgi protein 29 154 4.7E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 Gene3D G3DSA:3.90.230.10 126 353 4.1E-84 T 11-10-2018 UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 SUPERFAMILY SSF55920 126 353 9.94E-80 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 2.6E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 185 198 2.6E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 2.6E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 SUPERFAMILY SSF53092 7 127 7.5E-28 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 Gene3D G3DSA:3.40.350.10 1 125 3.5E-36 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 5.9E-26 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 UP17_16160 9bb22478c429a83c373799fdfc5d7cc8 353 Pfam PF00557 Metallopeptidase family M24 136 336 4.1E-67 T 11-10-2018 IPR000994 Peptidase M24 UP17_13185 e20f4cb011bd64828c831bff53d3a283 309 Gene3D G3DSA:1.10.3720.10 96 309 2.2E-23 T 11-10-2018 IPR035906 MetI-like superfamily UP17_13185 e20f4cb011bd64828c831bff53d3a283 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 309 5.7E-33 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_13185 e20f4cb011bd64828c831bff53d3a283 309 SUPERFAMILY SSF161098 102 288 4.84E-27 T 11-10-2018 IPR035906 MetI-like superfamily UP17_13185 e20f4cb011bd64828c831bff53d3a283 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 31 83 5.7E-19 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 Gene3D G3DSA:3.30.420.40 6 319 4.6E-126 T 11-10-2018 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 Gene3D G3DSA:3.90.640.10 178 251 4.6E-126 T 11-10-2018 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 Pfam PF06723 MreB/Mbl protein 4 327 3.0E-150 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 7.7E-136 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 Gene3D G3DSA:3.30.420.40 146 309 4.6E-126 T 11-10-2018 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 SUPERFAMILY SSF53067 3 140 5.7E-39 T 11-10-2018 UP17_24045 8d5598e31bf1100fdb874c15e919199b 333 SUPERFAMILY SSF53067 142 325 1.49E-48 T 11-10-2018 UP17_16100 bc233b3f480ad28be41bc593ac6ce8c1 136 Pfam PF03780 Asp23 family, cell envelope-related function 18 121 7.8E-35 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 UP17_00540 a30dc984fe9d806bc7e37da6fde29976 358 ProSitePatterns PS00112 Phosphagen kinase active site signature. 168 174 - T 11-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 UP17_00540 a30dc984fe9d806bc7e37da6fde29976 358 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 53 254 2.8E-74 T 11-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 UP17_00540 a30dc984fe9d806bc7e37da6fde29976 358 Gene3D G3DSA:3.30.590.10 9 264 3.9E-74 T 11-10-2018 UP17_00540 a30dc984fe9d806bc7e37da6fde29976 358 SUPERFAMILY SSF55931 4 269 1.15E-87 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 UP17_00540 a30dc984fe9d806bc7e37da6fde29976 358 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 351 39.637 T 11-10-2018 IPR023660 Protein arginine kinase GO:0016775 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 7.6E-61 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 SUPERFAMILY SSF52283 1 132 1.12E-36 T 11-10-2018 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 SUPERFAMILY SSF51735 95 279 2.63E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 SUPERFAMILY SSF55021 449 522 2.43E-18 T 11-10-2018 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 Gene3D G3DSA:3.30.70.260 451 524 9.6E-22 T 11-10-2018 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 Pfam PF01842 ACT domain 455 502 1.4E-8 T 11-10-2018 IPR002912 ACT domain UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 Gene3D G3DSA:3.40.50.720 5 302 5.0E-117 T 11-10-2018 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 310 9.1E-37 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 Gene3D G3DSA:3.40.50.720 95 276 5.0E-117 T 11-10-2018 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 Gene3D G3DSA:3.30.1330.90 315 450 2.7E-35 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 SUPERFAMILY SSF143548 316 446 1.05E-35 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_15600 c55c04710da2b9fe9f8077050ee60917 524 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 523 4.0E-206 T 11-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 UP17_10610 ba31760206bf7ac21617762bc5a6ca76 255 SUPERFAMILY SSF110399 1 239 8.24E-85 T 11-10-2018 UP17_10610 ba31760206bf7ac21617762bc5a6ca76 255 Gene3D G3DSA:3.20.20.70 1 255 3.3E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_10610 ba31760206bf7ac21617762bc5a6ca76 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 248 5.0E-111 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 UP17_10610 ba31760206bf7ac21617762bc5a6ca76 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.874 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 UP17_01095 12feb5c4b1e0975d51269fb4e5734816 295 Gene3D G3DSA:3.40.50.10330 5 122 2.2E-84 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 UP17_01095 12feb5c4b1e0975d51269fb4e5734816 295 SMART SM00046 3 130 6.8E-15 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 UP17_01095 12feb5c4b1e0975d51269fb4e5734816 295 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 9.9E-69 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase UP17_01095 12feb5c4b1e0975d51269fb4e5734816 295 SUPERFAMILY SSF111331 1 294 6.8E-78 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily UP17_01095 12feb5c4b1e0975d51269fb4e5734816 295 Gene3D G3DSA:2.60.200.40 123 286 2.2E-84 T 11-10-2018 UP17_01095 12feb5c4b1e0975d51269fb4e5734816 295 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 127 2.5E-35 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 UP17_20615 1d1a105b9d1b34530a9b275eb98b1a80 521 Gene3D G3DSA:3.40.190.10 202 505 1.3E-147 T 11-10-2018 UP17_20615 1d1a105b9d1b34530a9b275eb98b1a80 521 Gene3D G3DSA:3.10.105.10 276 495 1.3E-147 T 11-10-2018 UP17_20615 1d1a105b9d1b34530a9b275eb98b1a80 521 SUPERFAMILY SSF53850 41 520 3.53E-147 T 11-10-2018 UP17_20615 1d1a105b9d1b34530a9b275eb98b1a80 521 PIRSF PIRSF002741 4 521 4.3E-125 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 UP17_20615 1d1a105b9d1b34530a9b275eb98b1a80 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 438 9.4E-99 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain UP17_20615 1d1a105b9d1b34530a9b275eb98b1a80 521 Gene3D G3DSA:3.90.76.10 53 201 1.3E-147 T 11-10-2018 UP17_02940 17ff22aaf1af3831e2208118e325fdf4 136 Gene3D G3DSA:3.10.450.50 1 134 1.1E-21 T 11-10-2018 UP17_02940 17ff22aaf1af3831e2208118e325fdf4 136 Pfam PF07366 SnoaL-like polyketide cyclase 5 129 8.9E-22 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 UP17_02940 17ff22aaf1af3831e2208118e325fdf4 136 SUPERFAMILY SSF54427 2 129 1.61E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily UP17_21260 596b7b731db9162922f7197db64df0a1 603 Pfam PF00905 Penicillin binding protein transpeptidase domain 372 584 3.1E-38 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_21260 596b7b731db9162922f7197db64df0a1 603 Pfam PF05569 BlaR1 peptidase M56 11 304 2.6E-64 T 11-10-2018 IPR008756 Peptidase M56 UP17_21260 596b7b731db9162922f7197db64df0a1 603 Gene3D G3DSA:3.40.710.10 338 594 1.2E-91 T 11-10-2018 UP17_21260 596b7b731db9162922f7197db64df0a1 603 SUPERFAMILY SSF56601 357 589 4.51E-37 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_23275 7a1bd8939551a6d88f6aafaf955036fa 656 PIRSF PIRSF005091 1 630 1.3E-191 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like UP17_23275 7a1bd8939551a6d88f6aafaf955036fa 656 Gene3D G3DSA:3.40.720.10 246 556 1.2E-76 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 UP17_23275 7a1bd8939551a6d88f6aafaf955036fa 656 SUPERFAMILY SSF53649 252 644 1.42E-76 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 UP17_23275 7a1bd8939551a6d88f6aafaf955036fa 656 Pfam PF00884 Sulfatase 254 546 8.2E-38 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 UP17_17815 d52d0f80cd1056c2379dc421e3267365 373 Gene3D G3DSA:3.30.300.210 233 369 1.5E-11 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_17815 d52d0f80cd1056c2379dc421e3267365 373 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 365 3.4E-51 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_17815 d52d0f80cd1056c2379dc421e3267365 373 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 218 366 4.1E-18 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 Pfam PF00912 Transglycosylase 84 263 8.2E-62 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 Pfam PF00905 Penicillin binding protein transpeptidase domain 355 635 1.4E-48 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 Gene3D G3DSA:3.40.710.10 329 655 2.2E-204 T 11-10-2018 UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 94 643 4.2E-176 T 11-10-2018 UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 SUPERFAMILY SSF56601 248 665 9.52E-106 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 SUPERFAMILY SSF53955 74 288 2.81E-70 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 Gene3D G3DSA:3.90.1310.20 79 541 2.2E-204 T 11-10-2018 UP17_01640 3114ce5d3868f21dcf8791452bdd6994 743 Gene3D G3DSA:1.10.3810.10 94 292 2.2E-204 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 3.0E-226 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 8.9E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 PIRSF PIRSF004803 1 555 3.8E-244 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 Gene3D G3DSA:3.40.50.10710 207 357 4.8E-190 T 11-10-2018 UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 SMART SM00849 21 215 1.1E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 47.454 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 SUPERFAMILY SSF56281 11 424 3.32E-95 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 Gene3D G3DSA:3.10.20.580 449 555 3.4E-40 T 11-10-2018 UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 361 407 8.9E-9 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 Gene3D G3DSA:3.60.15.10 12 442 4.8E-190 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06930 8cadaac3ce6f95c19228062ffc2b2856 556 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 11-10-2018 IPR001587 Ribonuclease J, conserved site UP17_19500 6b9436080ebe507a18e1df300dfec03b 150 Gene3D G3DSA:3.40.630.30 1 150 3.3E-42 T 11-10-2018 UP17_19500 6b9436080ebe507a18e1df300dfec03b 150 Pfam PF00583 Acetyltransferase (GNAT) family 23 139 2.7E-19 T 11-10-2018 IPR000182 GNAT domain UP17_19500 6b9436080ebe507a18e1df300dfec03b 150 SUPERFAMILY SSF55729 1 145 2.36E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_14800 129a5b8978fe414b593da1ff2ab74a01 497 SUPERFAMILY SSF53720 6 486 2.62E-175 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_14800 129a5b8978fe414b593da1ff2ab74a01 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_14800 129a5b8978fe414b593da1ff2ab74a01 497 Gene3D G3DSA:3.40.309.10 260 453 4.9E-188 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_14800 129a5b8978fe414b593da1ff2ab74a01 497 Gene3D G3DSA:3.40.605.10 18 477 4.9E-188 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_14800 129a5b8978fe414b593da1ff2ab74a01 497 Pfam PF00171 Aldehyde dehydrogenase family 19 483 2.4E-183 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_12920 d41d21d0580ab7036e101bd1e901fcb4 381 Gene3D G3DSA:3.40.50.2000 175 332 2.2E-18 T 11-10-2018 UP17_12920 d41d21d0580ab7036e101bd1e901fcb4 381 Pfam PF13439 Glycosyltransferase Family 4 16 166 3.1E-21 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 UP17_12920 d41d21d0580ab7036e101bd1e901fcb4 381 Pfam PF00534 Glycosyl transferases group 1 175 306 5.4E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_12920 d41d21d0580ab7036e101bd1e901fcb4 381 Gene3D G3DSA:3.40.50.2000 1 174 3.4E-27 T 11-10-2018 UP17_12920 d41d21d0580ab7036e101bd1e901fcb4 381 SUPERFAMILY SSF53756 1 371 7.85E-52 T 11-10-2018 UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 SUPERFAMILY SSF55781 71 339 4.9E-70 T 11-10-2018 UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 PIRSF PIRSF005485 1 340 1.5E-122 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 SUPERFAMILY SSF46785 1 82 1.36E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 335 3.3E-111 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 Gene3D G3DSA:3.30.450.40 104 334 6.8E-59 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 Gene3D G3DSA:3.30.390.60 128 229 6.8E-59 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 33.404 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 Gene3D G3DSA:1.10.10.10 1 84 3.4E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16780 43280fe6443cdeb2726ebbbdfbf08af1 342 Pfam PF01628 HrcA protein C terminal domain 104 322 6.7E-64 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 UP17_03650 5792e29e9a0386640f3dd0394c03d87b 106 Pfam PF03551 Transcriptional regulator PadR-like family 14 84 7.9E-23 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_03650 5792e29e9a0386640f3dd0394c03d87b 106 SUPERFAMILY SSF46785 10 100 3.1E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03650 5792e29e9a0386640f3dd0394c03d87b 106 Gene3D G3DSA:1.10.10.10 1 104 2.6E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 Gene3D G3DSA:3.50.50.60 5 291 2.4E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 SUPERFAMILY SSF51905 1 299 6.69E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 279 5.2E-28 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 164 1.5E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 103 111 1.5E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.5E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 279 1.5E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 1.5E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.4E-14 T 11-10-2018 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 7.4E-14 T 11-10-2018 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 7.4E-14 T 11-10-2018 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 7.4E-14 T 11-10-2018 UP17_13520 7c3e5c3acfd79c6fe9c7dc0affbfb554 305 Gene3D G3DSA:3.50.50.60 116 228 2.4E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_14795 ac403f93ca5a906aad7e0b15598365e6 388 SUPERFAMILY SSF53067 1 329 5.18E-20 T 11-10-2018 UP17_14795 ac403f93ca5a906aad7e0b15598365e6 388 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 377 1.7E-103 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 UP17_14795 ac403f93ca5a906aad7e0b15598365e6 388 Gene3D G3DSA:3.30.420.40 8 374 3.7E-129 T 11-10-2018 UP17_14795 ac403f93ca5a906aad7e0b15598365e6 388 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 379 37.573 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 UP17_14795 ac403f93ca5a906aad7e0b15598365e6 388 Gene3D G3DSA:3.30.420.40 149 339 3.7E-129 T 11-10-2018 UP17_23425 d2352ca5fd966e487081adc7771fe376 155 Gene3D G3DSA:2.40.280.10 3 129 4.6E-53 T 11-10-2018 IPR023620 Small protein B UP17_23425 d2352ca5fd966e487081adc7771fe376 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site UP17_23425 d2352ca5fd966e487081adc7771fe376 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 132 3.0E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 UP17_23425 d2352ca5fd966e487081adc7771fe376 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 9.6E-60 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 UP17_23425 d2352ca5fd966e487081adc7771fe376 155 Pfam PF01668 SmpB protein 10 150 1.1E-63 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 UP17_23425 d2352ca5fd966e487081adc7771fe376 155 SUPERFAMILY SSF74982 4 132 4.19E-54 T 11-10-2018 IPR023620 Small protein B UP17_23425 d2352ca5fd966e487081adc7771fe376 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 76.877 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 UP17_01075 bd7f73f885d1c4d1bdc3f6684918679f 472 Gene3D G3DSA:2.30.40.10 4 453 1.4E-187 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_01075 bd7f73f885d1c4d1bdc3f6684918679f 472 Gene3D G3DSA:3.20.20.140 53 381 1.4E-187 T 11-10-2018 UP17_01075 bd7f73f885d1c4d1bdc3f6684918679f 472 SUPERFAMILY SSF51338 3 455 8.65E-35 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_01075 bd7f73f885d1c4d1bdc3f6684918679f 472 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 455 2.1E-200 T 11-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 UP17_01075 bd7f73f885d1c4d1bdc3f6684918679f 472 SUPERFAMILY SSF51556 53 383 5.44E-111 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_01075 bd7f73f885d1c4d1bdc3f6684918679f 472 Pfam PF01979 Amidohydrolase family 49 437 9.6E-27 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_24145 cb79c343498839c6980644ceca136d8a 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.3E-67 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24145 cb79c343498839c6980644ceca136d8a 465 Gene3D G3DSA:3.40.50.300 79 347 6.6E-114 T 11-10-2018 UP17_24145 cb79c343498839c6980644ceca136d8a 465 Gene3D G3DSA:2.40.10.170 1 77 8.7E-32 T 11-10-2018 UP17_24145 cb79c343498839c6980644ceca136d8a 465 SUPERFAMILY SSF50615 1 77 3.53E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24145 cb79c343498839c6980644ceca136d8a 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 57.605 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 UP17_24145 cb79c343498839c6980644ceca136d8a 465 SMART SM00382 145 408 5.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_24145 cb79c343498839c6980644ceca136d8a 465 SUPERFAMILY SSF47917 349 464 1.75E-50 T 11-10-2018 UP17_24145 cb79c343498839c6980644ceca136d8a 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24145 cb79c343498839c6980644ceca136d8a 465 SUPERFAMILY SSF52540 79 351 1.16E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24145 cb79c343498839c6980644ceca136d8a 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 6.0E-257 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 UP17_24145 cb79c343498839c6980644ceca136d8a 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 8.5E-24 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24145 cb79c343498839c6980644ceca136d8a 465 Gene3D G3DSA:1.10.1140.10 349 465 9.8E-56 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_06950 7d12992e69f5330d88c673a04370ff1a 220 Gene3D G3DSA:1.20.120.570 14 208 8.6E-54 T 11-10-2018 IPR036785 YkyA-like superfamily UP17_06950 7d12992e69f5330d88c673a04370ff1a 220 SUPERFAMILY SSF140423 21 210 5.49E-51 T 11-10-2018 IPR036785 YkyA-like superfamily UP17_06950 7d12992e69f5330d88c673a04370ff1a 220 Pfam PF10368 Putative cell-wall binding lipoprotein 13 212 4.2E-65 T 11-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 Pfam PF00842 Alanine racemase, C-terminal domain 248 372 4.7E-46 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 SMART SM01005 248 373 9.4E-70 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 40 50 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 Gene3D G3DSA:3.20.20.10 18 237 3.5E-125 T 11-10-2018 IPR029066 PLP-binding barrel UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 281 296 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 355 368 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 131 143 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 166 177 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 71 89 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 206 233 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 35 51 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 301 318 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 PRINTS PR00992 Alanine racemase signature 264 279 2.5E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 SUPERFAMILY SSF50621 243 383 1.95E-52 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 Pfam PF01168 Alanine racemase, N-terminal domain 16 233 5.6E-61 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 TIGRFAM TIGR00492 alr: alanine racemase 10 373 2.1E-120 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 SUPERFAMILY SSF51419 16 246 1.26E-58 T 11-10-2018 IPR029066 PLP-binding barrel UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 Hamap MF_01201 Alanine racemase. 9 373 34.704 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_01375 f451cd87676e6b3f0aff40f5ab52e75f 387 Gene3D G3DSA:2.40.37.10 16 370 3.5E-125 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 UP17_08145 360171d1b55ef622381524cafb22b669 263 SUPERFAMILY SSF55021 6 75 2.54E-8 T 11-10-2018 UP17_08145 360171d1b55ef622381524cafb22b669 263 Pfam PF11868 Protein of unknown function (DUF3388) 72 261 3.5E-106 T 11-10-2018 IPR024514 Domain of unknown function DUF3388 UP17_08145 360171d1b55ef622381524cafb22b669 263 PIRSF PIRSF021288 1 262 3.4E-142 T 11-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 SUPERFAMILY SSF103473 1 388 7.06E-69 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 PRINTS PR01035 Tetracycline resistance protein signature 133 155 9.2E-23 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 PRINTS PR01035 Tetracycline resistance protein signature 75 99 9.2E-23 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 PRINTS PR01035 Tetracycline resistance protein signature 161 181 9.2E-23 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 PRINTS PR01035 Tetracycline resistance protein signature 336 359 9.2E-23 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 PRINTS PR01035 Tetracycline resistance protein signature 276 297 9.2E-23 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 PRINTS PR01035 Tetracycline resistance protein signature 18 34 9.2E-23 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 PRINTS PR01035 Tetracycline resistance protein signature 248 268 9.2E-23 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 Pfam PF07690 Major Facilitator Superfamily 12 352 1.1E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_10845 7d9d4fb0baa818a20e7bf46d4f8f489c 395 Gene3D G3DSA:1.20.1250.20 1 388 8.0E-70 T 11-10-2018 UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 SMART SM00421 9 66 2.6E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 SUPERFAMILY SSF46894 8 71 1.8E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 3.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 3.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 3.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 Gene3D G3DSA:1.10.10.10 1 74 4.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_17845 255eb63a5ea08b2337ceeceaa9ef3a80 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 1.2E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_10840 66ca9191af10c22e3a3f07a68d45287c 169 SUPERFAMILY SSF46955 9 115 2.16E-27 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_10840 66ca9191af10c22e3a3f07a68d45287c 169 SMART SM00422 9 78 3.0E-27 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_10840 66ca9191af10c22e3a3f07a68d45287c 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 5.3E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_10840 66ca9191af10c22e3a3f07a68d45287c 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 5.3E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_10840 66ca9191af10c22e3a3f07a68d45287c 169 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 5.3E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_10840 66ca9191af10c22e3a3f07a68d45287c 169 Pfam PF13411 MerR HTH family regulatory protein 11 76 3.2E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_10840 66ca9191af10c22e3a3f07a68d45287c 169 Gene3D G3DSA:1.10.1660.10 6 156 1.3E-31 T 11-10-2018 UP17_14760 eed8c43302e206871469b89062bc4644 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 12 103 1.6E-34 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 UP17_14760 eed8c43302e206871469b89062bc4644 109 SUPERFAMILY SSF46973 6 104 1.29E-33 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 UP17_14760 eed8c43302e206871469b89062bc4644 109 Gene3D G3DSA:1.20.58.280 2 108 1.0E-36 T 11-10-2018 UP17_14760 eed8c43302e206871469b89062bc4644 109 PIRSF PIRSF000699 1 109 4.2E-34 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 Pfam PF07702 UTRA domain 96 234 4.9E-29 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 SMART SM00345 15 74 1.6E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 SMART SM00866 95 235 3.4E-22 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 SUPERFAMILY SSF64288 62 239 4.87E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 SUPERFAMILY SSF46785 4 81 2.55E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 Gene3D G3DSA:1.10.10.10 7 75 5.7E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 Gene3D G3DSA:3.40.1410.10 76 242 5.4E-35 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 2.4E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 4.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08930 659928ff942bd9eb95c3579176c2a9dd 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 4.7E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_24410 aa07d9fdf69350add6a7e1e2088a0949 248 Pfam PF13921 Myb-like DNA-binding domain 8 60 5.2E-5 T 11-10-2018 UP17_24410 aa07d9fdf69350add6a7e1e2088a0949 248 SUPERFAMILY SSF46689 3 62 6.64E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_24410 aa07d9fdf69350add6a7e1e2088a0949 248 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 2 77 2.6E-43 T 11-10-2018 IPR014243 Transcription factor, RsfA UP17_13480 388cd09d1b08aed6d892f5538c0b2b7d 151 Pfam PF02566 OsmC-like protein 39 141 2.2E-18 T 11-10-2018 IPR003718 OsmC/Ohr family UP17_13480 388cd09d1b08aed6d892f5538c0b2b7d 151 Gene3D G3DSA:3.30.300.20 5 145 6.5E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_13480 388cd09d1b08aed6d892f5538c0b2b7d 151 SUPERFAMILY SSF82784 4 141 1.27E-32 T 11-10-2018 IPR036102 OsmC/Ohr superfamily UP17_13480 388cd09d1b08aed6d892f5538c0b2b7d 151 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 141 1.8E-67 T 11-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 Pfam PF00815 Histidinol dehydrogenase 20 419 3.0E-170 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 420 42.238 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 SUPERFAMILY SSF53720 22 419 3.14E-85 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 Gene3D G3DSA:3.40.50.1980 226 342 2.2E-124 T 11-10-2018 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 222 254 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 27 419 6.9E-166 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 163 189 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 27 51 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 222 243 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 128 154 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 193 218 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 7.0E-88 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 PIRSF PIRSF000099 2 423 3.3E-167 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 UP17_23565 0d47f5c8e85c3ade3084b4237bf7fc1f 426 Gene3D G3DSA:3.40.50.1980 25 224 2.2E-124 T 11-10-2018 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 SUPERFAMILY SSF52096 11 190 1.24E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 Gene3D G3DSA:3.90.226.10 1 194 2.7E-78 T 11-10-2018 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 42.172 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 7.9E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 7.9E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 7.9E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 7.9E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 7.9E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 Pfam PF00574 Clp protease 13 192 3.1E-81 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA UP17_04060 baee2dca04b94a7dc841f5ca1acc561f 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 4.1E-96 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_06855 72c546e6d112eb8f8b4c01ae7700750d 120 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 115 3.0E-23 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UP17_06855 72c546e6d112eb8f8b4c01ae7700750d 120 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 120 16.742 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UP17_06855 72c546e6d112eb8f8b4c01ae7700750d 120 TIGRFAM TIGR00494 crcB: protein CrcB 6 117 8.7E-32 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UP17_17790 be2d495bd8191751571579c8e4e1a61a 80 Gene3D G3DSA:1.20.5.40 8 42 1.5E-7 T 11-10-2018 UP17_17790 be2d495bd8191751571579c8e4e1a61a 80 Pfam PF00239 Resolvase, N terminal domain 7 43 5.4E-5 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 Gene3D G3DSA:3.10.580.10 137 265 2.2E-47 T 11-10-2018 UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 Pfam PF01769 Divalent cation transporter 325 446 8.5E-32 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 Gene3D G3DSA:1.10.357.20 277 453 1.0E-61 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 Pfam PF03448 MgtE intracellular N domain 36 138 1.1E-22 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 SUPERFAMILY SSF161093 282 453 3.92E-54 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 Gene3D G3DSA:1.25.60.10 3 136 1.4E-42 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 SMART SM00116 148 201 1.8 T 11-10-2018 IPR000644 CBS domain UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 SMART SM00116 212 260 1.2E-8 T 11-10-2018 IPR000644 CBS domain UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 SMART SM00924 36 141 3.4E-24 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 SUPERFAMILY SSF54631 140 277 7.83E-33 T 11-10-2018 UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 454 1.1E-129 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 SUPERFAMILY SSF158791 15 138 9.68E-30 T 11-10-2018 UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 Pfam PF00571 CBS domain 205 259 6.0E-10 T 11-10-2018 IPR000644 CBS domain UP17_06070 c3dd0da3e6fdf5f2f06217ed579e1027 457 Pfam PF00571 CBS domain 141 199 4.1E-7 T 11-10-2018 IPR000644 CBS domain UP17_24680 b5a74c94900c39dcc7f8a57662bd5a89 219 Pfam PF04402 Protein of unknown function (DUF541) 21 217 1.7E-44 T 11-10-2018 IPR007497 Protein of unknown function DUF541 UP17_24680 b5a74c94900c39dcc7f8a57662bd5a89 219 Gene3D G3DSA:3.30.110.170 22 217 6.1E-57 T 11-10-2018 UP17_24680 b5a74c94900c39dcc7f8a57662bd5a89 219 Gene3D G3DSA:3.30.70.2970 32 138 6.1E-57 T 11-10-2018 UP17_20575 5fb197584ddbdd0cc731886935a45762 523 SUPERFAMILY SSF55469 426 516 1.18E-7 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_20575 5fb197584ddbdd0cc731886935a45762 523 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 63 236 3.2E-45 T 11-10-2018 IPR020051 SagB-type dehydrogenase domain UP17_20575 5fb197584ddbdd0cc731886935a45762 523 Pfam PF00881 Nitroreductase family 97 232 7.2E-6 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_20575 5fb197584ddbdd0cc731886935a45762 523 Gene3D G3DSA:3.40.109.10 23 296 5.4E-54 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_20575 5fb197584ddbdd0cc731886935a45762 523 Gene3D G3DSA:3.40.109.10 319 517 2.1E-23 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 SMART SM00493 80 165 8.7E-18 T 11-10-2018 IPR006171 TOPRIM domain UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 Pfam PF13662 Toprim domain 81 171 4.2E-26 T 11-10-2018 IPR006171 TOPRIM domain UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 SUPERFAMILY SSF111304 1 198 5.75E-80 T 11-10-2018 IPR023627 Recombination protein RecR UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 Gene3D G3DSA:3.40.1360.10 77 198 2.1E-49 T 11-10-2018 UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 Gene3D G3DSA:1.10.8.420 1 53 1.0E-21 T 11-10-2018 UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 1.9E-91 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 113.301 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 UP17_00130 5a43b01d57c5dbe11915cc62e66e3ea0 198 Pfam PF02132 RecR protein 40 78 6.6E-17 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger UP17_21190 020f56bcad857aaaaa4616ac67304392 187 PIRSF PIRSF000709 2 174 1.5E-5 T 11-10-2018 UP17_21190 020f56bcad857aaaaa4616ac67304392 187 Gene3D G3DSA:3.40.50.1240 2 181 1.6E-32 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_21190 020f56bcad857aaaaa4616ac67304392 187 SMART SM00855 4 142 5.9E-7 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 UP17_21190 020f56bcad857aaaaa4616ac67304392 187 SUPERFAMILY SSF53254 1 178 4.57E-33 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_21190 020f56bcad857aaaaa4616ac67304392 187 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 157 4.2E-26 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 UP17_06280 bc83cf53790d969183282c2286182ba0 261 SUPERFAMILY SSF51735 7 257 2.16E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06280 bc83cf53790d969183282c2286182ba0 261 Gene3D G3DSA:3.40.50.720 2 260 1.0E-75 T 11-10-2018 UP17_06280 bc83cf53790d969183282c2286182ba0 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 4.8E-61 T 11-10-2018 UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 6.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06280 bc83cf53790d969183282c2286182ba0 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.9E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 103 750 4.1E-130 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 SUPERFAMILY SSF56281 503 757 1.7E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 Pfam PF03772 Competence protein 212 472 3.0E-61 T 11-10-2018 IPR004477 ComEC/Rec2-related protein UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 Pfam PF00753 Metallo-beta-lactamase superfamily 509 720 2.1E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 Gene3D G3DSA:3.60.15.10 502 763 1.4E-73 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 233 402 2.3E-35 T 11-10-2018 IPR004477 ComEC/Rec2-related protein UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 SMART SM00849 511 721 8.2E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_16825 441e188d52a84ea28a9ee9ba01744237 768 Pfam PF13567 Domain of unknown function (DUF4131) 24 171 1.0E-11 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 UP17_04935 186a50261811eb295190c54892734c88 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 UP17_04935 186a50261811eb295190c54892734c88 257 Gene3D G3DSA:3.90.226.10 1 199 1.4E-69 T 11-10-2018 UP17_04935 186a50261811eb295190c54892734c88 257 SUPERFAMILY SSF52096 1 254 8.18E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_04935 186a50261811eb295190c54892734c88 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 255 2.0E-60 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_04935 186a50261811eb295190c54892734c88 257 Gene3D G3DSA:1.10.12.10 200 256 1.2E-21 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 2.5E-36 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 SMART SM01232 134 226 4.6E-49 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 1.4E-33 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 SUPERFAMILY SSF57716 222 274 1.05E-16 T 11-10-2018 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 Gene3D G3DSA:1.10.8.50 136 274 3.2E-48 T 11-10-2018 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 SUPERFAMILY SSF81624 2 139 5.36E-44 T 11-10-2018 IPR035937 MutM-like, N-terminal UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 SUPERFAMILY SSF46946 133 223 6.41E-31 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 6.0E-115 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 SMART SM00898 2 118 1.1E-55 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 Pfam PF06827 Zinc finger found in FPG and IleRS 246 274 1.8E-10 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 44.739 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 Gene3D G3DSA:3.20.190.10 2 129 5.2E-44 T 11-10-2018 IPR035937 MutM-like, N-terminal UP17_18120 ce9ebddaf312e39acd5249f96b38afd3 276 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 UP17_19175 19626ff248db706d30c25b26063aec2d 293 SUPERFAMILY SSF46689 4 55 8.61E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19175 19626ff248db706d30c25b26063aec2d 293 Pfam PF12833 Helix-turn-helix domain 27 105 2.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_19175 19626ff248db706d30c25b26063aec2d 293 SMART SM00342 21 104 1.8E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_19175 19626ff248db706d30c25b26063aec2d 293 Gene3D G3DSA:1.10.10.60 58 112 2.7E-15 T 11-10-2018 UP17_19175 19626ff248db706d30c25b26063aec2d 293 Gene3D G3DSA:1.10.10.60 2 57 8.7E-18 T 11-10-2018 UP17_19175 19626ff248db706d30c25b26063aec2d 293 Gene3D G3DSA:2.60.120.260 113 272 2.9E-13 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily UP17_19175 19626ff248db706d30c25b26063aec2d 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_19175 19626ff248db706d30c25b26063aec2d 293 SUPERFAMILY SSF46689 57 105 3.23E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_17590 77e815eb3ce08911f6487ba518649cd8 189 Pfam PF02545 Maf-like protein 4 183 3.4E-58 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 UP17_17590 77e815eb3ce08911f6487ba518649cd8 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 2.2E-58 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 UP17_17590 77e815eb3ce08911f6487ba518649cd8 189 PIRSF PIRSF006305 1 189 1.1E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 UP17_17590 77e815eb3ce08911f6487ba518649cd8 189 Gene3D G3DSA:3.90.950.10 1 187 8.0E-73 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like UP17_17590 77e815eb3ce08911f6487ba518649cd8 189 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 32.413 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 UP17_17590 77e815eb3ce08911f6487ba518649cd8 189 SUPERFAMILY SSF52972 2 182 4.38E-62 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like UP17_16945 7f3636cfa62a374b62ee405128d90182 583 SUPERFAMILY SSF56601 186 575 8.26E-57 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_16945 7f3636cfa62a374b62ee405128d90182 583 SUPERFAMILY SSF56519 48 230 1.83E-22 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 UP17_16945 7f3636cfa62a374b62ee405128d90182 583 Gene3D G3DSA:3.90.1310.30 50 232 4.1E-14 T 11-10-2018 UP17_16945 7f3636cfa62a374b62ee405128d90182 583 Gene3D G3DSA:3.40.710.10 235 582 2.1E-66 T 11-10-2018 UP17_16945 7f3636cfa62a374b62ee405128d90182 583 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 570 8.5E-44 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_16945 7f3636cfa62a374b62ee405128d90182 583 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 215 2.7E-6 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UP17_20220 130337494665830d002e1f4bff5410da 352 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 135 155 4.0E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_20220 130337494665830d002e1f4bff5410da 352 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 273 289 4.0E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_20220 130337494665830d002e1f4bff5410da 352 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 171 187 4.0E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_20220 130337494665830d002e1f4bff5410da 352 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 192 203 4.0E-27 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_20220 130337494665830d002e1f4bff5410da 352 Gene3D G3DSA:3.10.170.10 6 184 3.5E-54 T 11-10-2018 UP17_20220 130337494665830d002e1f4bff5410da 352 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 183 349 5.6E-45 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 UP17_20220 130337494665830d002e1f4bff5410da 352 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 72 180 2.8E-29 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 UP17_20220 130337494665830d002e1f4bff5410da 352 Gene3D G3DSA:1.10.390.10 185 350 7.1E-56 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily UP17_20220 130337494665830d002e1f4bff5410da 352 SUPERFAMILY SSF55486 73 350 6.23E-78 T 11-10-2018 UP17_19970 eae52cd3452edd0d3c7d4b006a0584c3 236 TIGRFAM TIGR00346 azlC: azaleucine resistance protein AzlC 10 230 2.0E-105 T 11-10-2018 IPR004471 Branched-chain amino acid transport, AzlC GO:0016021 UP17_19970 eae52cd3452edd0d3c7d4b006a0584c3 236 Pfam PF03591 AzlC protein 20 159 4.9E-37 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 Gene3D G3DSA:3.40.630.10 14 363 1.5E-136 T 11-10-2018 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 Pfam PF01546 Peptidase family M20/M25/M40 74 368 9.2E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 367 1.8E-163 T 11-10-2018 IPR010162 Peptidase M20B, peptidase T-like UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 PIRSF PIRSF001123 4 96 0.004 T 11-10-2018 IPR008007 Peptidase M42 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 PIRSF PIRSF001123 83 184 1.7E-6 T 11-10-2018 IPR008007 Peptidase M42 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 PIRSF PIRSF001123 277 373 1.3E-4 T 11-10-2018 IPR008007 Peptidase M42 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 SUPERFAMILY SSF55031 180 285 6.41E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 SUPERFAMILY SSF53187 5 370 3.93E-66 T 11-10-2018 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 Pfam PF07687 Peptidase dimerisation domain 183 273 4.6E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 UP17_15930 51ceca6509638e3dd41106eaf244e0fd 373 Gene3D G3DSA:3.30.70.360 177 288 1.5E-136 T 11-10-2018 UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 Gene3D G3DSA:1.10.10.10 89 174 1.5E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 91 169 3.6E-32 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 90 169 1.3E-36 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 SUPERFAMILY SSF46767 89 169 3.79E-32 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 140 146 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 11 86 1.1E-8 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 SUPERFAMILY SSF53155 8 87 8.44E-15 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 UP17_19205 0ed69101f37e16410511b0e39ad227e2 174 Gene3D G3DSA:3.30.160.70 2 88 8.8E-12 T 11-10-2018 UP17_25670 98d26b1ccac3584e431377333ad13aa1 331 Gene3D G3DSA:3.90.1720.10 201 331 1.8E-45 T 11-10-2018 UP17_25670 98d26b1ccac3584e431377333ad13aa1 331 Gene3D G3DSA:1.10.530.10 35 190 3.6E-45 T 11-10-2018 UP17_25670 98d26b1ccac3584e431377333ad13aa1 331 SUPERFAMILY SSF54001 205 329 4.58E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_25670 98d26b1ccac3584e431377333ad13aa1 331 SUPERFAMILY SSF53955 43 189 1.12E-6 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily UP17_25670 98d26b1ccac3584e431377333ad13aa1 331 Pfam PF00877 NlpC/P60 family 221 326 2.6E-31 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_25670 98d26b1ccac3584e431377333ad13aa1 331 Pfam PF13702 Lysozyme-like 40 188 1.7E-43 T 11-10-2018 UP17_14260 1d8217495c016a28c0feb6f7caa41f04 467 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 21 427 9.9E-196 T 11-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 UP17_14260 1d8217495c016a28c0feb6f7caa41f04 467 Gene3D G3DSA:3.20.20.70 63 348 2.4E-119 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_14260 1d8217495c016a28c0feb6f7caa41f04 467 TIGRFAM TIGR00238 TIGR00238: KamA family protein 14 342 6.4E-149 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase UP17_14260 1d8217495c016a28c0feb6f7caa41f04 467 Gene3D G3DSA:2.40.50.600 349 415 1.8E-19 T 11-10-2018 UP17_14260 1d8217495c016a28c0feb6f7caa41f04 467 SUPERFAMILY SSF102114 114 360 2.35E-33 T 11-10-2018 UP17_14260 1d8217495c016a28c0feb6f7caa41f04 467 Pfam PF12544 Lysine-2,3-aminomutase 321 447 2.0E-61 T 11-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain UP17_14260 1d8217495c016a28c0feb6f7caa41f04 467 PIRSF PIRSF004911 6 406 5.3E-160 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 283 2.0E-88 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 Pfam PF16745 RsgA N-terminal domain 3 56 1.1E-23 T 11-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 39.417 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 SUPERFAMILY SSF52540 64 290 4.09E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 Gene3D G3DSA:3.40.50.300 62 225 6.6E-49 T 11-10-2018 UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 Gene3D G3DSA:2.40.50.140 1 61 7.5E-27 T 11-10-2018 UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 SUPERFAMILY SSF50249 1 63 6.0E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 Pfam PF03193 RsgA GTPase 59 225 1.0E-61 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 UP17_07540 7f0249d9d0f32ea18e8b1272208898c2 293 Gene3D G3DSA:1.10.40.50 226 293 1.5E-22 T 11-10-2018 UP17_10310 5dd4c11c176f91ee5404cf23a23ce30b 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 250 1.4E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_10310 5dd4c11c176f91ee5404cf23a23ce30b 290 SUPERFAMILY SSF161098 7 258 1.21E-39 T 11-10-2018 IPR035906 MetI-like superfamily UP17_10310 5dd4c11c176f91ee5404cf23a23ce30b 290 Gene3D G3DSA:1.10.3720.10 4 262 7.1E-37 T 11-10-2018 IPR035906 MetI-like superfamily UP17_23830 188a2eccc0bef204236ee7c8f0c85c6b 247 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 62 227 1.4E-59 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 UP17_23830 188a2eccc0bef204236ee7c8f0c85c6b 247 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 4 242 59.119 T 11-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 UP17_23830 188a2eccc0bef204236ee7c8f0c85c6b 247 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 57 233 1.7E-57 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 UP17_07905 62b5d2597b0f87e10808722e26943db4 167 Gene3D G3DSA:3.30.1330.200 6 167 4.0E-45 T 11-10-2018 IPR038592 CheD-like superfamily UP17_07905 62b5d2597b0f87e10808722e26943db4 167 Pfam PF03975 CheD chemotactic sensory transduction 53 158 7.9E-32 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 UP17_07905 62b5d2597b0f87e10808722e26943db4 167 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 6 163 26.198 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 UP17_07905 62b5d2597b0f87e10808722e26943db4 167 SUPERFAMILY SSF64438 9 164 1.37E-44 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 Gene3D G3DSA:3.30.9.10 102 343 8.2E-139 T 11-10-2018 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 8.1E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 336 342 8.1E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 8.1E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 8.1E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 8.1E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 8.1E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 404 531 2.8E-21 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 Gene3D G3DSA:1.10.8.870 420 548 2.8E-34 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 SUPERFAMILY SSF54373 250 342 4.45E-11 T 11-10-2018 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 25 42 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 SUPERFAMILY SSF51905 7 237 1.44E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 Pfam PF01266 FAD dependent oxidoreductase 21 350 1.7E-56 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 Gene3D G3DSA:3.50.50.60 18 379 8.2E-139 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22430 bf415ea65cff67f5f33fd9c3b2c85750 550 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 15 238 3.7E-41 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 14 121 1.8E-27 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 SUPERFAMILY SSF46548 118 243 1.1E-27 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 Pfam PF13237 4Fe-4S dicluster domain 153 227 1.0E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 Gene3D G3DSA:3.10.20.30 1 116 1.5E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 Gene3D G3DSA:1.10.1060.10 118 252 4.9E-29 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_17855 bb9b7378643c9df3c7c90ef5b2cae647 257 SUPERFAMILY SSF54292 8 116 4.31E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 6 169 3.0E-60 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 Pfam PF12698 ABC-2 family transporter protein 23 167 1.5E-13 T 11-10-2018 UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 SUPERFAMILY SSF101967 577 713 1.7E-5 T 11-10-2018 UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 737 941 6.3E-64 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 587 613 3.4E-6 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 656 683 8.4E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 679 704 5.9E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 235 262 1.0E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_21635 0743d7d3b17145d4be4528329d7e7943 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 672 697 1.4E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_24180 cf4d887b56b2a7c699968908308189a8 123 Pfam PF03899 ATP synthase I chain 10 105 4.9E-13 T 11-10-2018 IPR005598 ATP synthase protein I UP17_24180 cf4d887b56b2a7c699968908308189a8 123 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 121 4.0E-25 T 11-10-2018 UP17_24545 6e0618f6d351c94dd44e3eda9150f8d3 194 Pfam PF01923 Cobalamin adenosyltransferase 3 166 1.0E-55 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 UP17_24545 6e0618f6d351c94dd44e3eda9150f8d3 194 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 180 3.0E-59 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 UP17_24545 6e0618f6d351c94dd44e3eda9150f8d3 194 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 178 1.8E-59 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 UP17_24545 6e0618f6d351c94dd44e3eda9150f8d3 194 Gene3D G3DSA:1.20.1200.10 12 194 3.3E-63 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 UP17_24545 6e0618f6d351c94dd44e3eda9150f8d3 194 SUPERFAMILY SSF89028 1 179 1.33E-61 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 UP17_06630 45106fbc4e6ac79174b1989e15c41ecf 459 Pfam PF03553 Na+/H+ antiporter family 162 452 8.1E-52 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 UP17_06630 45106fbc4e6ac79174b1989e15c41ecf 459 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 13 458 5.6E-125 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 UP17_17860 13186137c576854c4f461d26f88b4646 583 SUPERFAMILY SSF56425 231 353 8.82E-32 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17860 13186137c576854c4f461d26f88b4646 583 SUPERFAMILY SSF51905 6 430 3.6E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_17860 13186137c576854c4f461d26f88b4646 583 PIRSF PIRSF000171 336 574 1.0E-14 T 11-10-2018 UP17_17860 13186137c576854c4f461d26f88b4646 583 PIRSF PIRSF000171 3 240 1.4E-16 T 11-10-2018 UP17_17860 13186137c576854c4f461d26f88b4646 583 Gene3D G3DSA:1.20.58.100 423 539 1.1E-34 T 11-10-2018 UP17_17860 13186137c576854c4f461d26f88b4646 583 Gene3D G3DSA:3.90.700.10 258 367 9.7E-120 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17860 13186137c576854c4f461d26f88b4646 583 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17860 13186137c576854c4f461d26f88b4646 583 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 1.1E-42 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17860 13186137c576854c4f461d26f88b4646 583 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 1.8E-278 T 11-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 UP17_17860 13186137c576854c4f461d26f88b4646 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 2.6E-7 T 11-10-2018 UP17_17860 13186137c576854c4f461d26f88b4646 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.6E-7 T 11-10-2018 UP17_17860 13186137c576854c4f461d26f88b4646 583 SUPERFAMILY SSF46977 443 579 7.06E-44 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17860 13186137c576854c4f461d26f88b4646 583 Gene3D G3DSA:3.50.50.60 6 403 9.7E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_17860 13186137c576854c4f461d26f88b4646 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.0E-8 T 11-10-2018 UP17_17860 13186137c576854c4f461d26f88b4646 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 1.0E-8 T 11-10-2018 UP17_17860 13186137c576854c4f461d26f88b4646 583 Pfam PF00890 FAD binding domain 6 392 5.8E-83 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 SUPERFAMILY SSF46785 167 256 2.06E-42 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 Pfam PF06018 CodY GAF-like domain 2 178 2.5E-80 T 11-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 Gene3D G3DSA:3.30.450.40 1 159 2.7E-69 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 148.665 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 PIRSF PIRSF011572 1 257 3.9E-122 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 Pfam PF08222 CodY helix-turn-helix domain 198 257 9.4E-38 T 11-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 Gene3D G3DSA:1.10.10.10 160 259 2.9E-47 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_07750 4f531cea706b45f7a269f6cca06e2a9a 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 6.7E-124 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 SUPERFAMILY SSF51735 4 183 5.8E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 207 229 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 Pfam PF00742 Homoserine dehydrogenase 169 339 7.6E-53 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 PIRSF PIRSF036497 1 346 9.4E-104 T 11-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 SUPERFAMILY SSF55347 170 326 4.18E-47 T 11-10-2018 UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 Gene3D G3DSA:3.30.360.10 173 322 6.2E-96 T 11-10-2018 UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 4 77 1.1E-5 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_09460 6f7f9621ae6a9686e674b1fbf2af24c6 346 Gene3D G3DSA:3.40.50.720 5 339 6.2E-96 T 11-10-2018 UP17_08710 0fb00d8ea952fb0775d599511fa2e58f 610 Gene3D G3DSA:3.20.20.140 62 493 7.9E-83 T 11-10-2018 UP17_08710 0fb00d8ea952fb0775d599511fa2e58f 610 Gene3D G3DSA:2.30.40.10 10 509 7.9E-83 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_08710 0fb00d8ea952fb0775d599511fa2e58f 610 SUPERFAMILY SSF51556 61 494 1.63E-43 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_08710 0fb00d8ea952fb0775d599511fa2e58f 610 Gene3D G3DSA:3.10.310.70 81 204 7.9E-83 T 11-10-2018 UP17_08710 0fb00d8ea952fb0775d599511fa2e58f 610 Pfam PF07969 Amidohydrolase family 52 534 2.1E-107 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_08710 0fb00d8ea952fb0775d599511fa2e58f 610 SUPERFAMILY SSF51338 3 538 1.77E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_02535 8d9c9c6d63d1637e6dc920a8fdc4759b 354 SUPERFAMILY SSF55031 161 256 2.99E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_02535 8d9c9c6d63d1637e6dc920a8fdc4759b 354 Gene3D G3DSA:3.40.630.10 5 336 3.4E-87 T 11-10-2018 UP17_02535 8d9c9c6d63d1637e6dc920a8fdc4759b 354 Pfam PF01546 Peptidase family M20/M25/M40 63 348 5.2E-25 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_02535 8d9c9c6d63d1637e6dc920a8fdc4759b 354 SUPERFAMILY SSF53187 3 351 4.86E-52 T 11-10-2018 UP17_02535 8d9c9c6d63d1637e6dc920a8fdc4759b 354 Gene3D G3DSA:3.30.70.360 160 269 3.4E-87 T 11-10-2018 UP17_02535 8d9c9c6d63d1637e6dc920a8fdc4759b 354 Pfam PF07687 Peptidase dimerisation domain 159 256 9.1E-20 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 Pfam PF01227 GTP cyclohydrolase I 9 186 7.7E-81 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 42.418 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 Gene3D G3DSA:3.30.1130.10 55 188 1.1E-62 T 11-10-2018 UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 Gene3D G3DSA:1.10.286.10 1 54 6.9E-23 T 11-10-2018 UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 187 4.6E-79 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 UP17_15420 476470a01ac4f0b24b406f20198d38c5 188 SUPERFAMILY SSF55620 4 187 2.22E-78 T 11-10-2018 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 148 2.3E-51 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 8.4E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 8.4E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 8.4E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 8.4E-25 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 Gene3D G3DSA:1.10.10.10 4 67 1.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 8.0E-18 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 SUPERFAMILY SSF46785 5 78 6.22E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 3.4E-30 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 SUPERFAMILY SSF55252 80 149 4.19E-21 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 Pfam PF02863 Arginine repressor, C-terminal domain 82 144 2.1E-26 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 68.95 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 UP17_16060 fe33557cac7e8eac10a023305f2bae17 149 Gene3D G3DSA:3.30.1360.40 68 149 1.4E-31 T 11-10-2018 UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 SMART SM00448 4 127 2.1E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 PIRSF PIRSF000876 1 365 1.7E-133 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 365 37.943 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 Gene3D G3DSA:3.40.50.180 174 364 9.2E-65 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 SUPERFAMILY SSF52172 5 111 6.4E-29 T 11-10-2018 IPR011006 CheY-like superfamily UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 Pfam PF01339 CheB methylesterase 181 361 2.2E-55 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 Gene3D G3DSA:3.40.50.2300 3 141 2.5E-35 T 11-10-2018 UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 SUPERFAMILY SSF52738 177 365 8.76E-61 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal UP17_07885 6a84363d035a7fad84ef0fa932b72279 365 Pfam PF00072 Response regulator receiver domain 6 111 2.0E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_17830 5fd5c007f1aaa49cc10ce017ef9beff4 359 SMART SM00909 101 190 6.3E-19 T 11-10-2018 IPR019606 GerMN domain UP17_17830 5fd5c007f1aaa49cc10ce017ef9beff4 359 SMART SM00909 251 339 8.9E-12 T 11-10-2018 IPR019606 GerMN domain UP17_17830 5fd5c007f1aaa49cc10ce017ef9beff4 359 Pfam PF10646 Sporulation and spore germination 223 333 1.7E-13 T 11-10-2018 IPR019606 GerMN domain UP17_17830 5fd5c007f1aaa49cc10ce017ef9beff4 359 Pfam PF10646 Sporulation and spore germination 78 185 1.0E-18 T 11-10-2018 IPR019606 GerMN domain UP17_16655 c7041212740960ae2fed83486b8b75bc 212 SUPERFAMILY SSF46785 7 77 2.32E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_16655 c7041212740960ae2fed83486b8b75bc 212 SUPERFAMILY SSF54631 71 205 3.16E-22 T 11-10-2018 UP17_16655 c7041212740960ae2fed83486b8b75bc 212 PIRSF PIRSF026546 5 211 7.8E-101 T 11-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS UP17_16655 c7041212740960ae2fed83486b8b75bc 212 Pfam PF00571 CBS domain 148 204 3.6E-6 T 11-10-2018 IPR000644 CBS domain UP17_16655 c7041212740960ae2fed83486b8b75bc 212 Pfam PF00571 CBS domain 87 134 1.2E-5 T 11-10-2018 IPR000644 CBS domain UP17_16655 c7041212740960ae2fed83486b8b75bc 212 SMART SM00116 154 205 0.0027 T 11-10-2018 IPR000644 CBS domain UP17_16655 c7041212740960ae2fed83486b8b75bc 212 SMART SM00116 87 135 0.77 T 11-10-2018 IPR000644 CBS domain UP17_16655 c7041212740960ae2fed83486b8b75bc 212 Pfam PF08279 HTH domain 10 62 1.2E-12 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 UP17_16655 c7041212740960ae2fed83486b8b75bc 212 Gene3D G3DSA:3.10.580.10 65 212 9.6E-58 T 11-10-2018 UP17_16655 c7041212740960ae2fed83486b8b75bc 212 Gene3D G3DSA:1.10.10.10 3 64 2.6E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_07460 cb82655db47707aac82bca0511f554d5 238 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07460 cb82655db47707aac82bca0511f554d5 238 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 226 2.2E-60 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07460 cb82655db47707aac82bca0511f554d5 238 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 38.287 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07460 cb82655db47707aac82bca0511f554d5 238 SUPERFAMILY SSF51366 2 233 9.98E-69 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_07460 cb82655db47707aac82bca0511f554d5 238 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 226 1.8E-46 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07460 cb82655db47707aac82bca0511f554d5 238 SMART SM00934 4 229 6.3E-88 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07460 cb82655db47707aac82bca0511f554d5 238 Gene3D G3DSA:3.20.20.70 1 237 9.1E-81 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_05150 96054bcea08341b88ca1b843faa72dc0 238 Gene3D G3DSA:2.60.40.10 143 236 2.4E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_05150 96054bcea08341b88ca1b843faa72dc0 238 Pfam PF13115 YtkA-like 143 221 6.8E-15 T 11-10-2018 IPR032693 YtkA-like domain UP17_05150 96054bcea08341b88ca1b843faa72dc0 238 Pfam PF13115 YtkA-like 37 114 6.8E-9 T 11-10-2018 IPR032693 YtkA-like domain UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 SUPERFAMILY SSF47203 264 481 7.32E-54 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 280 480 7.4E-56 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 Gene3D G3DSA:2.40.110.10 146 274 1.3E-46 T 11-10-2018 UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 Gene3D G3DSA:1.10.3140.10 2 145 6.6E-46 T 11-10-2018 UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 SUPERFAMILY SSF56645 3 274 2.49E-84 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 PIRSF PIRSF000331 1 488 3.0E-170 T 11-10-2018 IPR004925 HpaB/PvcC/4-BUDH UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 273 3.4E-95 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal UP17_10485 ba4340bca6d6cccc0239582b510024a7 493 Gene3D G3DSA:1.20.140.10 276 490 4.6E-68 T 11-10-2018 UP17_20205 b2f702b5f0a8c2810630e07235337d2e 368 Pfam PF14072 DNA-sulfur modification-associated 14 343 3.1E-23 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB UP17_20205 b2f702b5f0a8c2810630e07235337d2e 368 TIGRFAM TIGR03187 DGQHR: DGQHR domain 26 276 3.9E-18 T 11-10-2018 IPR017601 DGQHR-containing domain UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 Pfam PF00155 Aminotransferase class I and II 112 447 2.8E-33 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 Gene3D G3DSA:1.10.10.10 1 69 1.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 Gene3D G3DSA:3.40.640.10 145 363 3.1E-108 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 SMART SM00345 9 68 2.7E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 2.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 Gene3D G3DSA:3.90.1150.10 105 467 3.1E-108 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 SUPERFAMILY SSF53383 97 467 9.57E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_25220 d215c2b04bbb2a79d2b6e845f36e0222 469 SUPERFAMILY SSF46785 3 75 3.69E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_17350 18058a9345ca77bea035eb7df4917615 423 Pfam PF03129 Anticodon binding domain 331 420 9.8E-18 T 11-10-2018 IPR004154 Anticodon-binding UP17_17350 18058a9345ca77bea035eb7df4917615 423 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 410 3.0E-157 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 UP17_17350 18058a9345ca77bea035eb7df4917615 423 Pfam PF13393 Histidyl-tRNA synthetase 8 313 1.6E-44 T 11-10-2018 UP17_17350 18058a9345ca77bea035eb7df4917615 423 PIRSF PIRSF001549 1 421 1.4E-119 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 UP17_17350 18058a9345ca77bea035eb7df4917615 423 SUPERFAMILY SSF55681 3 318 5.17E-98 T 11-10-2018 UP17_17350 18058a9345ca77bea035eb7df4917615 423 SUPERFAMILY SSF52954 329 420 1.45E-24 T 11-10-2018 UP17_17350 18058a9345ca77bea035eb7df4917615 423 Gene3D G3DSA:3.40.50.800 327 421 2.3E-25 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily UP17_17350 18058a9345ca77bea035eb7df4917615 423 Gene3D G3DSA:3.30.930.10 1 324 1.2E-115 T 11-10-2018 UP17_17350 18058a9345ca77bea035eb7df4917615 423 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 33.826 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 UP17_15810 1712de6ac87e591f001342b93a2ed48c 302 PRINTS PR00069 Aldo-keto reductase signature 37 61 4.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_15810 1712de6ac87e591f001342b93a2ed48c 302 PRINTS PR00069 Aldo-keto reductase signature 134 151 4.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_15810 1712de6ac87e591f001342b93a2ed48c 302 PRINTS PR00069 Aldo-keto reductase signature 103 121 4.7E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_15810 1712de6ac87e591f001342b93a2ed48c 302 Gene3D G3DSA:3.20.20.100 1 293 4.5E-103 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_15810 1712de6ac87e591f001342b93a2ed48c 302 SUPERFAMILY SSF51430 1 294 7.6E-78 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_15810 1712de6ac87e591f001342b93a2ed48c 302 Pfam PF00248 Aldo/keto reductase family 15 291 8.8E-61 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain UP17_15500 be26b5e0d9bb6b33583fb4636c19b1ad 193 SMART SM00563 35 147 1.1E-34 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 UP17_15500 be26b5e0d9bb6b33583fb4636c19b1ad 193 SUPERFAMILY SSF69593 2 190 4.71E-52 T 11-10-2018 UP17_15500 be26b5e0d9bb6b33583fb4636c19b1ad 193 Pfam PF01553 Acyltransferase 21 144 9.3E-23 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 UP17_11370 48c5517deae7ad46026b5f6611d0566f 174 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 4.3E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_11370 48c5517deae7ad46026b5f6611d0566f 174 Gene3D G3DSA:1.10.357.10 3 170 3.6E-14 T 11-10-2018 UP17_11370 48c5517deae7ad46026b5f6611d0566f 174 SUPERFAMILY SSF46689 2 66 1.25E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 9 170 2.4E-64 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 578 779 1.4E-68 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 SUPERFAMILY SSF58104 164 371 1.57E-7 T 11-10-2018 UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 174 200 2.4E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 525 552 5.9E-7 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 497 524 8.7E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 Pfam PF12698 ABC-2 family transporter protein 577 775 2.6E-19 T 11-10-2018 UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 Pfam PF12698 ABC-2 family transporter protein 21 168 1.7E-12 T 11-10-2018 UP17_13230 b69f9afe794ee9450007a070858aa5cd 797 SUPERFAMILY SSF58104 301 535 8.37E-9 T 11-10-2018 UP17_22505 8689508a2b4d60704c0dab5e0bb55a08 260 SUPERFAMILY SSF46785 2 94 3.28E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_22505 8689508a2b4d60704c0dab5e0bb55a08 260 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 8 75 9.8E-20 T 11-10-2018 IPR002831 Transcription regulator TrmB, N-terminal UP17_22505 8689508a2b4d60704c0dab5e0bb55a08 260 Gene3D G3DSA:1.10.10.10 1 102 2.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_06140 cebbcf9ee9d4a9c820deca6e0ca5a5b2 757 Pfam PF00580 UvrD/REP helicase N-terminal domain 142 404 2.9E-57 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 UP17_06140 cebbcf9ee9d4a9c820deca6e0ca5a5b2 757 Gene3D G3DSA:1.10.486.10 515 667 9.6E-75 T 11-10-2018 UP17_06140 cebbcf9ee9d4a9c820deca6e0ca5a5b2 757 Gene3D G3DSA:1.10.10.160 247 322 1.5E-79 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily UP17_06140 cebbcf9ee9d4a9c820deca6e0ca5a5b2 757 Pfam PF13361 UvrD-like helicase C-terminal domain 410 742 2.0E-44 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UP17_06140 cebbcf9ee9d4a9c820deca6e0ca5a5b2 757 Gene3D G3DSA:3.40.50.300 413 755 9.6E-75 T 11-10-2018 UP17_06140 cebbcf9ee9d4a9c820deca6e0ca5a5b2 757 Gene3D G3DSA:3.40.50.300 141 405 1.5E-79 T 11-10-2018 UP17_06140 cebbcf9ee9d4a9c820deca6e0ca5a5b2 757 SUPERFAMILY SSF52540 139 756 1.33E-127 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_06985 04bc07434e7968a884e111498407bc1f 144 Pfam PF08968 Domain of unknown function (DUF1885) 4 142 2.4E-58 T 11-10-2018 IPR015062 Protein of unknown function DUF1885 UP17_06985 04bc07434e7968a884e111498407bc1f 144 Gene3D G3DSA:1.20.5.850 2 50 1.7E-16 T 11-10-2018 UP17_06985 04bc07434e7968a884e111498407bc1f 144 SUPERFAMILY SSF111171 5 141 2.62E-40 T 11-10-2018 IPR036294 Rbstp2229-like superfamily UP17_06985 04bc07434e7968a884e111498407bc1f 144 Gene3D G3DSA:3.30.310.120 51 141 6.9E-29 T 11-10-2018 UP17_17485 a5bdf9918f2346afc84432b564135cb1 375 Gene3D G3DSA:1.10.260.50 13 276 1.1E-113 T 11-10-2018 UP17_17485 a5bdf9918f2346afc84432b564135cb1 375 Pfam PF00266 Aminotransferase class-V 2 364 5.5E-67 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_17485 a5bdf9918f2346afc84432b564135cb1 375 Gene3D G3DSA:3.90.1150.10 2 365 1.1E-113 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_17485 a5bdf9918f2346afc84432b564135cb1 375 PIRSF PIRSF005572 1 374 4.0E-106 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 UP17_17485 a5bdf9918f2346afc84432b564135cb1 375 Gene3D G3DSA:3.40.640.10 59 233 1.1E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_17485 a5bdf9918f2346afc84432b564135cb1 375 SUPERFAMILY SSF53383 1 371 1.32E-84 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_25855 657b3e2dba51d16ca44d0a974a226e6b 432 Pfam PF14501 GHKL domain 326 421 1.2E-12 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain UP17_25855 657b3e2dba51d16ca44d0a974a226e6b 432 Gene3D G3DSA:3.30.565.10 281 431 7.4E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_25855 657b3e2dba51d16ca44d0a974a226e6b 432 SUPERFAMILY SSF55874 293 428 1.7E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_04665 783f429e27f5ed71a4be574343186145 156 SUPERFAMILY SSF52833 39 154 3.51E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_04665 783f429e27f5ed71a4be574343186145 156 Pfam PF00085 Thioredoxin 60 152 4.7E-9 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 UP17_04665 783f429e27f5ed71a4be574343186145 156 Gene3D G3DSA:3.40.30.10 47 151 3.4E-14 T 11-10-2018 UP17_06895 e368ae5d7aca4e227e79042b1ec8d982 79 Gene3D G3DSA:3.30.720.20 1 79 7.7E-31 T 11-10-2018 IPR038073 YkuJ-like superfamily UP17_06895 e368ae5d7aca4e227e79042b1ec8d982 79 PIRSF PIRSF037356 1 78 4.1E-30 T 11-10-2018 IPR014904 Protein of unknown function DUF1797 UP17_06895 e368ae5d7aca4e227e79042b1ec8d982 79 Pfam PF08796 Protein of unknown function (DUF1797) 7 77 1.0E-25 T 11-10-2018 IPR014904 Protein of unknown function DUF1797 UP17_06895 e368ae5d7aca4e227e79042b1ec8d982 79 SUPERFAMILY SSF143567 2 78 4.84E-26 T 11-10-2018 IPR038073 YkuJ-like superfamily UP17_02355 ec1bcf80d8558ce6f963fb86e00832dc 363 SUPERFAMILY SSF53822 44 323 2.36E-47 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_02355 ec1bcf80d8558ce6f963fb86e00832dc 363 Gene3D G3DSA:3.40.50.2300 47 314 2.4E-69 T 11-10-2018 UP17_02355 ec1bcf80d8558ce6f963fb86e00832dc 363 Pfam PF13407 Periplasmic binding protein domain 54 307 1.3E-27 T 11-10-2018 IPR025997 Periplasmic binding protein UP17_02355 ec1bcf80d8558ce6f963fb86e00832dc 363 Gene3D G3DSA:3.40.50.2300 149 320 2.4E-69 T 11-10-2018 UP17_16610 46f6c5456ab12cd0b5deceeb290cc6df 314 Gene3D G3DSA:3.40.50.11270 12 103 2.9E-94 T 11-10-2018 UP17_16610 46f6c5456ab12cd0b5deceeb290cc6df 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 32.126 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 UP17_16610 46f6c5456ab12cd0b5deceeb290cc6df 314 Gene3D G3DSA:3.40.1010.20 7 284 2.9E-94 T 11-10-2018 UP17_16610 46f6c5456ab12cd0b5deceeb290cc6df 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 5.0E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 UP17_16610 46f6c5456ab12cd0b5deceeb290cc6df 314 Gene3D G3DSA:3.40.1010.20 104 197 2.9E-94 T 11-10-2018 UP17_16610 46f6c5456ab12cd0b5deceeb290cc6df 314 Pfam PF02401 LytB protein 4 284 2.3E-80 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 UP17_11410 2aa73e2aa7e5b7940ac8b652ee1a501f 199 Gene3D G3DSA:1.10.101.10 15 89 3.2E-18 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_11410 2aa73e2aa7e5b7940ac8b652ee1a501f 199 Gene3D G3DSA:2.40.10.420 164 199 3.7E-17 T 11-10-2018 UP17_11410 2aa73e2aa7e5b7940ac8b652ee1a501f 199 Gene3D G3DSA:1.10.10.2520 90 163 7.7E-28 T 11-10-2018 UP17_11410 2aa73e2aa7e5b7940ac8b652ee1a501f 199 SUPERFAMILY SSF47090 17 86 3.92E-15 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_11410 2aa73e2aa7e5b7940ac8b652ee1a501f 199 Pfam PF07486 Cell Wall Hydrolase 100 197 2.6E-23 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 UP17_11410 2aa73e2aa7e5b7940ac8b652ee1a501f 199 Pfam PF01471 Putative peptidoglycan binding domain 28 84 1.2E-11 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 Gene3D G3DSA:3.10.310.10 7 281 1.2E-65 T 11-10-2018 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 6 267 7.0E-57 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 Gene3D G3DSA:3.10.310.10 125 280 1.2E-65 T 11-10-2018 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 SUPERFAMILY SSF54506 7 136 2.27E-29 T 11-10-2018 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 Pfam PF01678 Diaminopimelate epimerase 163 272 1.0E-12 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 Pfam PF01678 Diaminopimelate epimerase 6 111 2.4E-25 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 290 29.607 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 UP17_14035 c2161fcc39c0074a7c87ea9e4c0cfec4 328 SUPERFAMILY SSF54506 148 288 2.27E-26 T 11-10-2018 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 SUPERFAMILY SSF52172 1 183 5.69E-41 T 11-10-2018 IPR011006 CheY-like superfamily UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 Pfam PF00158 Sigma-54 interaction domain 141 306 5.1E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 Gene3D G3DSA:1.10.10.60 411 452 9.5E-8 T 11-10-2018 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 SMART SM00382 160 303 4.4E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 Gene3D G3DSA:1.10.8.60 311 390 2.2E-22 T 11-10-2018 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 Pfam PF00072 Response regulator receiver domain 3 108 5.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 SMART SM00448 1 111 3.6E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 Gene3D G3DSA:3.40.50.2300 2 119 1.0E-31 T 11-10-2018 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 Gene3D G3DSA:3.40.50.300 126 310 6.5E-64 T 11-10-2018 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 SUPERFAMILY SSF52540 140 383 3.1E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 SUPERFAMILY SSF46689 354 450 8.51E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_12085 1f854f616cefb332f4a86ac58c2dc548 456 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 5.3E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_17550 049b4a0d5712b3f8fbdaa5dba00575a2 147 SUPERFAMILY SSF50249 4 80 4.69E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_17550 049b4a0d5712b3f8fbdaa5dba00575a2 147 SMART SM00316 4 73 4.0E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_17550 049b4a0d5712b3f8fbdaa5dba00575a2 147 Pfam PF00575 S1 RNA binding domain 4 72 3.0E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_17550 049b4a0d5712b3f8fbdaa5dba00575a2 147 Gene3D G3DSA:2.40.50.140 1 83 2.0E-26 T 11-10-2018 UP17_07975 de918b5e512463bd5c65e70fce4eea63 157 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 156 24.754 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 UP17_07975 de918b5e512463bd5c65e70fce4eea63 157 Pfam PF17384 RimP C-terminal SH3 domain 87 156 9.1E-22 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal UP17_07975 de918b5e512463bd5c65e70fce4eea63 157 SUPERFAMILY SSF74942 85 156 9.29E-22 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily UP17_07975 de918b5e512463bd5c65e70fce4eea63 157 Gene3D G3DSA:3.30.300.70 1 81 1.1E-30 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily UP17_07975 de918b5e512463bd5c65e70fce4eea63 157 SUPERFAMILY SSF75420 3 84 1.83E-26 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily UP17_07975 de918b5e512463bd5c65e70fce4eea63 157 Pfam PF02576 RimP N-terminal domain 15 84 1.5E-29 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal UP17_07975 de918b5e512463bd5c65e70fce4eea63 157 Gene3D G3DSA:2.30.30.180 88 154 3.5E-24 T 11-10-2018 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 SUPERFAMILY SSF52768 6 369 1.25E-104 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 Pfam PF00850 Histone deacetylase domain 22 317 7.6E-77 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 Gene3D G3DSA:3.40.800.20 3 371 8.0E-100 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01272 Acetoin utilisation ACUC protein signature 86 100 3.2E-44 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01272 Acetoin utilisation ACUC protein signature 350 369 3.2E-44 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01272 Acetoin utilisation ACUC protein signature 313 332 3.2E-44 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01272 Acetoin utilisation ACUC protein signature 107 120 3.2E-44 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01272 Acetoin utilisation ACUC protein signature 274 290 3.2E-44 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01272 Acetoin utilisation ACUC protein signature 333 349 3.2E-44 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01272 Acetoin utilisation ACUC protein signature 16 36 3.2E-44 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01270 Histone deacetylase superfamily signature 163 178 3.8E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01270 Histone deacetylase superfamily signature 130 153 3.8E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 UP17_18455 a9e69e2bb7ca52c2a3bc899326d2df6a 398 PRINTS PR01270 Histone deacetylase superfamily signature 249 259 3.8E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 SMART SM00493 1 130 1.1E-14 T 11-10-2018 IPR006171 TOPRIM domain UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 Gene3D G3DSA:1.10.460.10 164 597 6.4E-155 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 Gene3D G3DSA:1.10.290.10 282 411 6.4E-155 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 Gene3D G3DSA:3.40.50.140 1 156 6.9E-52 T 11-10-2018 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 Pfam PF01751 Toprim domain 3 138 2.4E-11 T 11-10-2018 IPR006171 TOPRIM domain UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 Gene3D G3DSA:2.70.20.10 219 482 6.4E-155 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 710 1.1E-192 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 SMART SM00436 130 225 1.4E-33 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 Pfam PF01131 DNA topoisomerase 157 587 3.4E-123 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 Pfam PF13342 C-terminal repeat of topoisomerase 657 715 6.2E-18 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 SMART SM00437 273 552 4.7E-80 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 195 213 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 515 529 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 SUPERFAMILY SSF56712 1 602 8.11E-176 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain UP17_14470 7f64e578aa956a3401d6b6bcde5e710a 724 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 310 324 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 UP17_10780 8d9a9ec5e19d23ea636b9fc66d85c316 424 SUPERFAMILY SSF53383 15 423 1.15E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_10780 8d9a9ec5e19d23ea636b9fc66d85c316 424 Pfam PF00202 Aminotransferase class-III 21 419 1.4E-95 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_10780 8d9a9ec5e19d23ea636b9fc66d85c316 424 Gene3D G3DSA:3.40.640.10 55 318 2.2E-124 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_10780 8d9a9ec5e19d23ea636b9fc66d85c316 424 PIRSF PIRSF000521 155 423 3.6E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_10780 8d9a9ec5e19d23ea636b9fc66d85c316 424 PIRSF PIRSF000521 3 147 7.9E-9 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_10780 8d9a9ec5e19d23ea636b9fc66d85c316 424 Gene3D G3DSA:3.90.1150.10 26 414 2.2E-124 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_20155 140329f8acdf67bc71b59d232a06757f 777 SUPERFAMILY SSF52540 202 766 2.44E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20155 140329f8acdf67bc71b59d232a06757f 777 Gene3D G3DSA:3.40.50.300 608 775 3.0E-56 T 11-10-2018 UP17_20155 140329f8acdf67bc71b59d232a06757f 777 Gene3D G3DSA:3.40.50.300 430 596 2.0E-8 T 11-10-2018 UP17_20155 140329f8acdf67bc71b59d232a06757f 777 Gene3D G3DSA:3.40.50.300 199 353 5.4E-10 T 11-10-2018 UP17_20155 140329f8acdf67bc71b59d232a06757f 777 Pfam PF13538 UvrD-like helicase C-terminal domain 709 754 3.9E-8 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain UP17_20155 140329f8acdf67bc71b59d232a06757f 777 Pfam PF00580 UvrD/REP helicase N-terminal domain 212 582 3.8E-11 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 UP17_20155 140329f8acdf67bc71b59d232a06757f 777 Pfam PF13361 UvrD-like helicase C-terminal domain 605 690 2.6E-6 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UP17_12075 092b168117de543501c1c63dd01053b9 366 SUPERFAMILY SSF53850 40 357 1.68E-57 T 11-10-2018 UP17_12075 092b168117de543501c1c63dd01053b9 366 Pfam PF13416 Bacterial extracellular solute-binding protein 61 313 3.2E-32 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein UP17_12075 092b168117de543501c1c63dd01053b9 366 Gene3D G3DSA:3.40.190.10 146 353 8.8E-64 T 11-10-2018 UP17_12075 092b168117de543501c1c63dd01053b9 366 Gene3D G3DSA:3.40.190.10 57 326 8.8E-64 T 11-10-2018 UP17_04240 8a3081369baffe24f7fa6d45b93ca2fa 366 Gene3D G3DSA:1.20.1740.10 1 194 1.8E-6 T 11-10-2018 UP17_04240 8a3081369baffe24f7fa6d45b93ca2fa 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 360 2.2E-65 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_04240 8a3081369baffe24f7fa6d45b93ca2fa 366 Pfam PF03845 Spore germination protein 5 317 2.9E-56 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_08130 9bb3339a46e0d4a1cb584079f54e6f1d 428 Pfam PF05193 Peptidase M16 inactive domain 182 362 4.9E-19 T 11-10-2018 IPR007863 Peptidase M16, C-terminal UP17_08130 9bb3339a46e0d4a1cb584079f54e6f1d 428 Gene3D G3DSA:3.30.830.10 8 237 2.2E-58 T 11-10-2018 UP17_08130 9bb3339a46e0d4a1cb584079f54e6f1d 428 Pfam PF00675 Insulinase (Peptidase family M16) 63 174 8.2E-16 T 11-10-2018 IPR011765 Peptidase M16, N-terminal UP17_08130 9bb3339a46e0d4a1cb584079f54e6f1d 428 SUPERFAMILY SSF63411 15 219 2.62E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UP17_08130 9bb3339a46e0d4a1cb584079f54e6f1d 428 SUPERFAMILY SSF63411 249 427 1.34E-21 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UP17_08130 9bb3339a46e0d4a1cb584079f54e6f1d 428 Gene3D G3DSA:3.30.830.10 238 427 2.6E-45 T 11-10-2018 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Gene3D G3DSA:1.10.3500.10 118 496 1.6E-153 T 11-10-2018 IPR023323 Tex-like domain superfamily UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Gene3D G3DSA:1.10.10.650 3 115 2.2E-39 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Gene3D G3DSA:2.40.50.140 633 722 2.5E-23 T 11-10-2018 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 SUPERFAMILY SSF47781 468 554 9.67E-26 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Pfam PF09371 Tex-like protein N-terminal domain 15 199 3.8E-72 T 11-10-2018 IPR018974 Tex-like protein, N-terminal UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 SUPERFAMILY SSF47781 558 633 1.27E-16 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Pfam PF12836 Helix-hairpin-helix motif 489 553 9.3E-26 T 11-10-2018 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 SUPERFAMILY SSF158832 9 319 8.24E-114 T 11-10-2018 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Gene3D G3DSA:3.30.420.140 323 449 1.6E-153 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Pfam PF16921 Tex protein YqgF-like domain 324 449 6.4E-55 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 SMART SM00316 650 721 7.7E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Gene3D G3DSA:1.10.150.310 497 631 1.3E-46 T 11-10-2018 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 SMART SM00732 324 422 2.0E-32 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 SUPERFAMILY SSF50249 636 722 2.09E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 Pfam PF00575 S1 RNA binding domain 649 720 6.0E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_01430 031a0829f76f261ea7d1d74d8df4e15b 727 SUPERFAMILY SSF53098 320 467 6.22E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_01825 79a7cf3bed206be7cae352496d8154a1 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 3 92 2.4E-24 T 11-10-2018 IPR010310 Type VII secretion system ESAT-6-like UP17_01825 79a7cf3bed206be7cae352496d8154a1 96 Gene3D G3DSA:1.10.287.1060 1 96 1.8E-26 T 11-10-2018 UP17_01825 79a7cf3bed206be7cae352496d8154a1 96 Pfam PF06013 Proteins of 100 residues with WXG 3 88 1.4E-22 T 11-10-2018 IPR010310 Type VII secretion system ESAT-6-like UP17_01825 79a7cf3bed206be7cae352496d8154a1 96 SUPERFAMILY SSF140453 2 95 2.75E-22 T 11-10-2018 IPR036689 ESAT-6-like superfamily UP17_04100 fdc84442274e7c4493686037ec0d269b 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 48 176 2.3E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 UP17_04100 fdc84442274e7c4493686037ec0d269b 177 Gene3D G3DSA:3.40.50.1240 1 176 2.6E-11 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_04100 fdc84442274e7c4493686037ec0d269b 177 SUPERFAMILY SSF53254 48 176 3.85E-13 T 11-10-2018 IPR029033 Histidine phosphatase superfamily UP17_10925 7d4ee056a285200408e8f177291e93f2 481 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_10925 7d4ee056a285200408e8f177291e93f2 481 Pfam PF00171 Aldehyde dehydrogenase family 23 474 2.0E-134 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_10925 7d4ee056a285200408e8f177291e93f2 481 Gene3D G3DSA:3.40.309.10 256 451 2.9E-140 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_10925 7d4ee056a285200408e8f177291e93f2 481 Gene3D G3DSA:3.40.605.10 18 473 2.9E-140 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_10925 7d4ee056a285200408e8f177291e93f2 481 SUPERFAMILY SSF53720 6 474 2.36E-129 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_10925 7d4ee056a285200408e8f177291e93f2 481 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_04215 d4e7c62a2b348c2b6a20cdb0fbc13e49 161 Gene3D G3DSA:3.10.129.10 4 159 1.2E-35 T 11-10-2018 UP17_04215 d4e7c62a2b348c2b6a20cdb0fbc13e49 161 SUPERFAMILY SSF54637 5 151 1.24E-24 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_18805 7b6ea04d9395d05c3ae1216be9776417 360 SMART SM01329 5 348 4.9E-171 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 UP17_18805 7b6ea04d9395d05c3ae1216be9776417 360 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 UP17_18805 7b6ea04d9395d05c3ae1216be9776417 360 SUPERFAMILY SSF53659 2 352 3.56E-114 T 11-10-2018 UP17_18805 7b6ea04d9395d05c3ae1216be9776417 360 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 351 1.2E-150 T 11-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 UP17_18805 7b6ea04d9395d05c3ae1216be9776417 360 Gene3D G3DSA:3.40.718.10 1 356 3.4E-128 T 11-10-2018 UP17_18805 7b6ea04d9395d05c3ae1216be9776417 360 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 348 6.0E-89 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 UP17_19815 6cd8354ed87a213169402d5dacd69fbb 420 SUPERFAMILY SSF56672 5 347 3.31E-57 T 11-10-2018 UP17_19815 6cd8354ed87a213169402d5dacd69fbb 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_19815 6cd8354ed87a213169402d5dacd69fbb 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 1.3E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_19815 6cd8354ed87a213169402d5dacd69fbb 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_19815 6cd8354ed87a213169402d5dacd69fbb 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_19815 6cd8354ed87a213169402d5dacd69fbb 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_19815 6cd8354ed87a213169402d5dacd69fbb 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 3.3E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_17335 51c746722947e05c266409758e249fce 379 Pfam PF01546 Peptidase family M20/M25/M40 77 373 3.6E-27 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_17335 51c746722947e05c266409758e249fce 379 SUPERFAMILY SSF55031 180 284 3.59E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_17335 51c746722947e05c266409758e249fce 379 PIRSF PIRSF037238 1 376 8.0E-132 T 11-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase UP17_17335 51c746722947e05c266409758e249fce 379 Pfam PF07687 Peptidase dimerisation domain 177 277 1.9E-19 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_17335 51c746722947e05c266409758e249fce 379 SUPERFAMILY SSF53187 3 376 7.6E-49 T 11-10-2018 UP17_17335 51c746722947e05c266409758e249fce 379 Gene3D G3DSA:3.40.630.10 15 364 1.8E-119 T 11-10-2018 UP17_17335 51c746722947e05c266409758e249fce 379 Gene3D G3DSA:3.30.70.360 180 289 1.8E-119 T 11-10-2018 UP17_16530 34a974c7866a664a09f8696ccfd17843 722 SUPERFAMILY SSF56519 57 312 7.06E-35 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 UP17_16530 34a974c7866a664a09f8696ccfd17843 722 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 296 1.8E-35 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UP17_16530 34a974c7866a664a09f8696ccfd17843 722 Pfam PF00905 Penicillin binding protein transpeptidase domain 345 679 3.5E-69 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_16530 34a974c7866a664a09f8696ccfd17843 722 SUPERFAMILY SSF56601 313 686 8.65E-66 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_16530 34a974c7866a664a09f8696ccfd17843 722 Gene3D G3DSA:3.40.710.10 312 664 6.0E-233 T 11-10-2018 UP17_16530 34a974c7866a664a09f8696ccfd17843 722 Gene3D G3DSA:1.10.10.1230 86 187 6.0E-233 T 11-10-2018 UP17_16530 34a974c7866a664a09f8696ccfd17843 722 Gene3D G3DSA:3.90.1310.30 61 568 6.0E-233 T 11-10-2018 UP17_25675 e31fb0146c1a445d7a5ea857ef23481c 450 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 27 234 3.3E-15 T 11-10-2018 IPR018778 Type VII secretion system EssB UP17_25675 e31fb0146c1a445d7a5ea857ef23481c 450 Gene3D G3DSA:1.10.510.10 20 191 2.2E-15 T 11-10-2018 UP17_24285 822a7642069f3c770625d25fd37ef557 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UP17_24285 822a7642069f3c770625d25fd37ef557 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 3.0E-114 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UP17_24285 822a7642069f3c770625d25fd37ef557 285 SUPERFAMILY SSF51569 1 285 1.76E-105 T 11-10-2018 UP17_24285 822a7642069f3c770625d25fd37ef557 285 Gene3D G3DSA:3.20.20.70 1 285 7.9E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_24285 822a7642069f3c770625d25fd37ef557 285 PIRSF PIRSF001359 1 285 8.7E-125 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UP17_24285 822a7642069f3c770625d25fd37ef557 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 1.3E-129 T 11-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 UP17_24285 822a7642069f3c770625d25fd37ef557 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 6.5E-104 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UP17_24285 822a7642069f3c770625d25fd37ef557 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 UP17_08925 d6bc92bdda4386d2ba1a5b87b909bc91 260 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 217 230 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 UP17_08925 d6bc92bdda4386d2ba1a5b87b909bc91 260 SUPERFAMILY SSF53613 1 259 7.64E-52 T 11-10-2018 IPR029056 Ribokinase-like UP17_08925 d6bc92bdda4386d2ba1a5b87b909bc91 260 Pfam PF00294 pfkB family carbohydrate kinase 13 102 4.9E-16 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB UP17_08925 d6bc92bdda4386d2ba1a5b87b909bc91 260 Pfam PF00294 pfkB family carbohydrate kinase 173 259 4.9E-21 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB UP17_08925 d6bc92bdda4386d2ba1a5b87b909bc91 260 Gene3D G3DSA:3.40.1190.20 2 260 1.1E-47 T 11-10-2018 IPR029056 Ribokinase-like UP17_09780 71111930576bece711660ede896113be 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site UP17_09780 71111930576bece711660ede896113be 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 7.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_09780 71111930576bece711660ede896113be 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 7.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_09780 71111930576bece711660ede896113be 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 7.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_09780 71111930576bece711660ede896113be 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 7.8E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_09780 71111930576bece711660ede896113be 150 Pfam PF01047 MarR family 28 85 1.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_09780 71111930576bece711660ede896113be 150 Gene3D G3DSA:1.10.10.10 2 145 8.8E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09780 71111930576bece711660ede896113be 150 SUPERFAMILY SSF46785 4 139 3.44E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09780 71111930576bece711660ede896113be 150 SMART SM00347 21 121 5.6E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 SUPERFAMILY SSF158472 181 229 1.83E-5 T 11-10-2018 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 452 3.7E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 Gene3D G3DSA:1.10.287.130 184 303 1.0E-24 T 11-10-2018 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 299 1.4E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 SMART SM00388 235 302 2.1E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 SMART SM00387 344 453 1.1E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 Gene3D G3DSA:3.30.565.10 307 453 1.5E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 SUPERFAMILY SSF55874 303 452 3.01E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 451 9.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 9.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 9.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 432 9.5E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 SMART SM00304 180 234 0.0022 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_21775 a611deb4a80c80940237e614f3e26eb9 453 SUPERFAMILY SSF47384 218 300 5.89E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_15585 efbb305e068f2dc0e977da1b1891d501 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 6.3E-21 T 11-10-2018 UP17_15585 efbb305e068f2dc0e977da1b1891d501 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 6.1E-8 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 UP17_15585 efbb305e068f2dc0e977da1b1891d501 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 6.1E-8 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 UP17_15585 efbb305e068f2dc0e977da1b1891d501 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 6.1E-8 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 UP17_15585 efbb305e068f2dc0e977da1b1891d501 82 SUPERFAMILY SSF54862 4 72 3.14E-13 T 11-10-2018 UP17_15585 efbb305e068f2dc0e977da1b1891d501 82 Gene3D G3DSA:3.30.70.20 2 82 1.1E-33 T 11-10-2018 UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 10 179 9.9E-47 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 Gene3D G3DSA:3.40.50.970 2 185 8.7E-49 T 11-10-2018 UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 SUPERFAMILY SSF52518 8 181 8.61E-44 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 Gene3D G3DSA:3.40.50.970 368 546 6.6E-47 T 11-10-2018 UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 535 3.9E-32 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 330 1.1E-29 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 Gene3D G3DSA:3.40.50.1220 194 344 2.3E-38 T 11-10-2018 UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 SUPERFAMILY SSF52467 168 351 1.02E-35 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily UP17_10920 1e810ecb33bfb0e53287e53e3d78006f 562 SUPERFAMILY SSF52518 370 540 6.97E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 Gene3D G3DSA:3.20.20.70 123 265 2.4E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 PIRSF PIRSF006250 1 278 1.0E-93 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 Gene3D G3DSA:3.90.1170.20 13 272 2.4E-101 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 272 2.3E-61 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 SUPERFAMILY SSF54675 3 107 2.43E-26 T 11-10-2018 UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 274 1.2E-99 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 107 9.3E-24 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 UP17_17475 5fb38a4afa18a00428c321a98a0132ce 283 SUPERFAMILY SSF51690 109 275 2.83E-60 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 Gene3D G3DSA:3.40.50.720 1 147 4.2E-59 T 11-10-2018 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 Gene3D G3DSA:3.90.110.10 148 307 1.1E-58 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 305 1.1E-32 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 5.7E-51 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 5.7E-51 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 5.7E-51 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 5.7E-51 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 5.7E-51 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 SUPERFAMILY SSF51735 4 146 5.96E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 PIRSF PIRSF000102 3 308 3.8E-106 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 302 4.8E-125 T 11-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 309 45.143 T 11-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 5.9E-48 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 11-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 UP17_18650 525160f67f9ba010ad958f18d4c7ca76 310 SUPERFAMILY SSF56327 147 307 1.87E-52 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UP17_15900 e9b82c57019e4cc83c5e5e40e36eaa9f 272 Gene3D G3DSA:1.10.600.10 2 272 1.6E-63 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily UP17_15900 e9b82c57019e4cc83c5e5e40e36eaa9f 272 Pfam PF00494 Squalene/phytoene synthase 17 198 2.9E-24 T 11-10-2018 UP17_15900 e9b82c57019e4cc83c5e5e40e36eaa9f 272 SUPERFAMILY SSF48576 11 259 7.05E-43 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily UP17_07420 786067f25171dc23d7dab3013327fcc1 181 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 5 180 38.814 T 11-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 UP17_07420 786067f25171dc23d7dab3013327fcc1 181 Pfam PF00156 Phosphoribosyl transferase domain 7 151 1.1E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_07420 786067f25171dc23d7dab3013327fcc1 181 Gene3D G3DSA:3.40.50.2020 1 181 2.7E-62 T 11-10-2018 UP17_07420 786067f25171dc23d7dab3013327fcc1 181 SUPERFAMILY SSF53271 7 176 6.95E-43 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 Pfam PF00303 Thymidylate synthase 2 264 1.1E-129 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 Gene3D G3DSA:3.30.572.10 1 264 6.0E-136 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 3.6E-99 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 3.6E-42 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 SUPERFAMILY SSF55831 1 264 1.28E-132 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_14370 e57d30219d7fb566dbbcc40ff8b5a178 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.101 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 UP17_07235 ab394956d10ddfdfd15111435d68e68d 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.52 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07235 ab394956d10ddfdfd15111435d68e68d 57 SUPERFAMILY SSF57829 1 55 1.34E-21 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 UP17_07235 ab394956d10ddfdfd15111435d68e68d 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.6E-27 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07235 ab394956d10ddfdfd15111435d68e68d 57 Pfam PF01783 Ribosomal L32p protein family 2 56 2.9E-26 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:3.30.2090.10 177 294 6.4E-270 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:3.30.2090.10 725 813 6.4E-270 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 SUPERFAMILY SSF82693 41 131 4.45E-20 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 SUPERFAMILY SSF82693 134 346 2.46E-13 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:3.30.70.1440 675 870 6.4E-270 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Pfam PF00873 AcrB/AcrD/AcrF family 4 1030 2.1E-211 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:1.20.1640.10 11 526 6.4E-270 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:1.20.1640.10 527 1027 6.4E-270 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:3.30.70.1320 131 349 6.4E-270 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 SUPERFAMILY SSF82866 314 512 1.29E-41 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 SUPERFAMILY SSF82714 727 811 1.02E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 380 401 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 489 512 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 353 376 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 566 583 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 408 432 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.1E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 SUPERFAMILY SSF82714 185 250 1.31E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:3.30.70.1430 41 821 6.4E-270 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 Gene3D G3DSA:3.30.70.1430 581 674 6.4E-270 T 11-10-2018 UP17_01295 23d46ede8236d335ca7c1a403969a30c 1042 SUPERFAMILY SSF82866 811 1035 7.85E-47 T 11-10-2018 UP17_08220 317f131090b9501b605e0631c05c0fce 142 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 4.3E-23 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA UP17_08220 317f131090b9501b605e0631c05c0fce 142 PIRSF PIRSF021287 1 123 4.1E-51 T 11-10-2018 IPR016783 Biofilm formation YmcA UP17_08220 317f131090b9501b605e0631c05c0fce 142 Gene3D G3DSA:1.20.1500.10 1 124 1.1E-34 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily UP17_08220 317f131090b9501b605e0631c05c0fce 142 SUPERFAMILY SSF158622 4 121 2.49E-33 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 Hamap MF_01454 GTPase Obg [obg]. 1 329 47.804 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 Gene3D G3DSA:2.40.240.60 358 429 2.6E-19 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 Pfam PF01018 GTP1/OBG 3 157 1.5E-59 T 11-10-2018 IPR006169 GTP1/OBG domain UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 359 428 2.8E-26 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 Gene3D G3DSA:3.40.50.300 158 341 1.4E-62 T 11-10-2018 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 9.3E-144 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 PIRSF PIRSF002401 1 376 1.2E-142 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 Pfam PF09269 Domain of unknown function (DUF1967) 359 427 6.1E-24 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 SUPERFAMILY SSF82051 1 157 1.96E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 322 1.7E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 SUPERFAMILY SSF102741 357 429 2.48E-23 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 SUPERFAMILY SSF52540 160 334 1.04E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 Pfam PF01926 50S ribosome-binding GTPase 160 283 5.8E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 UP17_17505 858d56ade9667c6fdfbb7ae207c05032 429 Gene3D G3DSA:2.70.210.12 1 157 1.5E-60 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily UP17_05270 f3a85469ae3c629727f6476ca0010f74 310 Gene3D G3DSA:1.20.1280.120 15 303 1.1E-97 T 11-10-2018 UP17_05270 f3a85469ae3c629727f6476ca0010f74 310 SUPERFAMILY SSF56634 17 308 5.76E-72 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_05270 f3a85469ae3c629727f6476ca0010f74 310 Gene3D G3DSA:2.40.180.20 36 289 1.1E-97 T 11-10-2018 UP17_05270 f3a85469ae3c629727f6476ca0010f74 310 SMART SM01060 11 310 4.6E-8 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_05270 f3a85469ae3c629727f6476ca0010f74 310 PIRSF PIRSF000296 4 310 1.2E-86 T 11-10-2018 IPR024168 Catalase, SrpA-type, predicted UP17_05270 f3a85469ae3c629727f6476ca0010f74 310 Pfam PF00199 Catalase 30 306 2.4E-32 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_11135 ac6ee7e9d01448a529d9b745549bd411 489 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 467 4.6E-181 T 11-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 UP17_11135 ac6ee7e9d01448a529d9b745549bd411 489 PIRSF PIRSF000484 2 482 6.7E-153 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 UP17_11135 ac6ee7e9d01448a529d9b745549bd411 489 Gene3D G3DSA:3.20.140.10 12 472 2.4E-205 T 11-10-2018 UP17_11135 ac6ee7e9d01448a529d9b745549bd411 489 Gene3D G3DSA:3.20.20.70 153 320 2.4E-205 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_11135 ac6ee7e9d01448a529d9b745549bd411 489 SUPERFAMILY SSF51690 141 480 1.77E-131 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 UP17_11135 ac6ee7e9d01448a529d9b745549bd411 489 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 159 358 1.9E-9 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 UP17_11135 ac6ee7e9d01448a529d9b745549bd411 489 SUPERFAMILY SSF54675 6 140 9.86E-50 T 11-10-2018 UP17_08520 41e68b2e465693eefd74f351622d3c36 482 SUPERFAMILY SSF55604 6 82 2.62E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_08520 41e68b2e465693eefd74f351622d3c36 482 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_08520 41e68b2e465693eefd74f351622d3c36 482 Pfam PF02378 Phosphotransferase system, EIIC 110 410 1.6E-52 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_08520 41e68b2e465693eefd74f351622d3c36 482 Gene3D G3DSA:3.30.1360.60 1 78 2.5E-27 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_08520 41e68b2e465693eefd74f351622d3c36 482 Pfam PF00367 phosphotransferase system, EIIB 8 41 4.1E-15 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_08520 41e68b2e465693eefd74f351622d3c36 482 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 463 1.2E-197 T 11-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 UP17_08520 41e68b2e465693eefd74f351622d3c36 482 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 32 111 2.7E-20 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 UP17_23160 fbe3775d75d681eeee26db42850bd400 344 Pfam PF09383 NIL domain 268 340 9.2E-20 T 11-10-2018 IPR018449 NIL domain UP17_23160 fbe3775d75d681eeee26db42850bd400 344 SUPERFAMILY SSF55021 252 343 1.83E-22 T 11-10-2018 UP17_23160 fbe3775d75d681eeee26db42850bd400 344 SMART SM00930 266 341 9.1E-26 T 11-10-2018 IPR018449 NIL domain UP17_23160 fbe3775d75d681eeee26db42850bd400 344 Gene3D G3DSA:3.30.70.260 250 344 4.3E-29 T 11-10-2018 UP17_23160 fbe3775d75d681eeee26db42850bd400 344 Pfam PF00005 ABC transporter 24 172 8.1E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_23160 fbe3775d75d681eeee26db42850bd400 344 SMART SM00382 33 221 5.9E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_23160 fbe3775d75d681eeee26db42850bd400 344 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23160 fbe3775d75d681eeee26db42850bd400 344 Gene3D G3DSA:3.40.50.300 1 249 2.8E-74 T 11-10-2018 UP17_23160 fbe3775d75d681eeee26db42850bd400 344 SUPERFAMILY SSF52540 1 243 2.16E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13440 39c047c291be7bbc4a94bc7916b70cd8 202 SMART SM00903 20 176 5.6E-30 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 UP17_13440 39c047c291be7bbc4a94bc7916b70cd8 202 Pfam PF01613 Flavin reductase like domain 23 175 6.5E-20 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 UP17_13440 39c047c291be7bbc4a94bc7916b70cd8 202 Gene3D G3DSA:2.30.110.10 1 202 2.3E-63 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 UP17_13440 39c047c291be7bbc4a94bc7916b70cd8 202 SUPERFAMILY SSF50475 3 199 4.91E-46 T 11-10-2018 UP17_00970 f7ba26011158fa554ecf2724306528e7 187 SUPERFAMILY SSF88946 7 98 4.4E-29 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_00970 f7ba26011158fa554ecf2724306528e7 187 SUPERFAMILY SSF88659 117 184 2.24E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_00970 f7ba26011158fa554ecf2724306528e7 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_00970 f7ba26011158fa554ecf2724306528e7 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 5.8E-37 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_00970 f7ba26011158fa554ecf2724306528e7 187 Gene3D G3DSA:1.10.10.10 125 187 2.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_00970 f7ba26011158fa554ecf2724306528e7 187 Pfam PF08281 Sigma-70, region 4 130 180 1.8E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_00970 f7ba26011158fa554ecf2724306528e7 187 Gene3D G3DSA:1.10.1740.10 5 124 4.8E-32 T 11-10-2018 UP17_00970 f7ba26011158fa554ecf2724306528e7 187 Pfam PF04542 Sigma-70 region 2 24 89 2.4E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_00970 f7ba26011158fa554ecf2724306528e7 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 8.0E-101 T 11-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae UP17_10820 c98bd5d6a923c9f9b5376cfa5adec1ce 271 SUPERFAMILY SSF53098 99 261 1.39E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_10820 c98bd5d6a923c9f9b5376cfa5adec1ce 271 Gene3D G3DSA:3.30.420.10 104 259 1.7E-13 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_10820 c98bd5d6a923c9f9b5376cfa5adec1ce 271 Pfam PF00665 Integrase core domain 109 221 2.4E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_10820 c98bd5d6a923c9f9b5376cfa5adec1ce 271 Pfam PF13276 HTH-like domain 27 83 8.5E-15 T 11-10-2018 IPR025948 HTH-like domain UP17_19670 d1ac671e998f89fa3f36932866006966 88 Pfam PF14122 YokU-like protein, putative antitoxin 3 80 5.4E-15 T 11-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU UP17_19670 d1ac671e998f89fa3f36932866006966 88 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 46 4.8E-6 T 11-10-2018 IPR022453 Zinc finger, MqsA-type UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 Gene3D G3DSA:1.10.10.10 1 73 3.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 SUPERFAMILY SSF48008 79 211 1.96E-16 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 SMART SM00895 82 208 1.8E-5 T 11-10-2018 IPR011711 GntR, C-terminal UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 Gene3D G3DSA:1.20.120.530 76 216 7.1E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 SMART SM00345 14 72 3.7E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 SUPERFAMILY SSF46785 1 76 9.4E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 Pfam PF07729 FCD domain 84 192 9.5E-19 T 11-10-2018 IPR011711 GntR, C-terminal UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 72 5.5E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 43 1.4E-5 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_15235 1100ba1fa54a27dae6dd4aafcc202034 225 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 43 62 1.4E-5 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 Pfam PF01037 Lrp/AsnC ligand binding domain 73 132 4.5E-9 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 Gene3D G3DSA:3.30.70.920 52 136 1.7E-15 T 11-10-2018 UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 9.8E-12 T 11-10-2018 UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 SUPERFAMILY SSF54909 62 136 7.11E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 SUPERFAMILY SSF46785 1 60 2.86E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 Gene3D G3DSA:1.10.10.10 1 51 2.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_05245 f54fd932a86273f9d3a2481297f5b390 155 SMART SM00344 1 107 7.7E-28 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_20380 d2379e4f637e42284b1a7674897237f7 402 Gene3D G3DSA:3.30.70.360 176 293 4.5E-132 T 11-10-2018 UP17_20380 d2379e4f637e42284b1a7674897237f7 402 PIRSF PIRSF037226 4 402 1.6E-165 T 11-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted UP17_20380 d2379e4f637e42284b1a7674897237f7 402 SUPERFAMILY SSF55031 180 285 5.36E-23 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_20380 d2379e4f637e42284b1a7674897237f7 402 Gene3D G3DSA:3.40.630.10 29 371 4.5E-132 T 11-10-2018 UP17_20380 d2379e4f637e42284b1a7674897237f7 402 Pfam PF01546 Peptidase family M20/M25/M40 90 358 1.6E-9 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_20380 d2379e4f637e42284b1a7674897237f7 402 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 26 345 3.2E-68 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_20380 d2379e4f637e42284b1a7674897237f7 402 SUPERFAMILY SSF53187 13 385 1.47E-58 T 11-10-2018 UP17_20380 d2379e4f637e42284b1a7674897237f7 402 Pfam PF07687 Peptidase dimerisation domain 183 269 7.5E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_23795 582f1e853f893b73c81d443510b371f3 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 2.6E-107 T 11-10-2018 IPR003797 DegV UP17_23795 582f1e853f893b73c81d443510b371f3 280 Gene3D G3DSA:3.40.50.10170 1 151 3.0E-56 T 11-10-2018 UP17_23795 582f1e853f893b73c81d443510b371f3 280 Gene3D G3DSA:3.30.1180.10 153 279 9.5E-45 T 11-10-2018 UP17_23795 582f1e853f893b73c81d443510b371f3 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 278 6.5E-98 T 11-10-2018 IPR003797 DegV UP17_23795 582f1e853f893b73c81d443510b371f3 280 SUPERFAMILY SSF82549 1 278 3.4E-95 T 11-10-2018 UP17_09465 6354d90085621008d0d38ff4c440647f 472 SUPERFAMILY SSF53720 1 468 1.7E-149 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_09465 6354d90085621008d0d38ff4c440647f 472 Pfam PF00171 Aldehyde dehydrogenase family 7 464 1.5E-162 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_09465 6354d90085621008d0d38ff4c440647f 472 Gene3D G3DSA:3.40.605.10 13 464 4.7E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_09465 6354d90085621008d0d38ff4c440647f 472 Gene3D G3DSA:3.40.309.10 249 436 4.7E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 Gene3D G3DSA:3.30.70.100 1 68 4.0E-26 T 11-10-2018 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 Pfam PF00403 Heavy-metal-associated domain 5 66 6.6E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 PRINTS PR00942 Copper-transporting ATPase 1 signature 29 52 6.5E-8 T 11-10-2018 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 PRINTS PR00942 Copper-transporting ATPase 1 signature 58 68 6.5E-8 T 11-10-2018 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 PRINTS PR00942 Copper-transporting ATPase 1 signature 3 28 6.5E-8 T 11-10-2018 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 4 68 5.2E-26 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 SUPERFAMILY SSF55008 2 68 4.45E-21 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 UP17_09665 fb7f16edfdd3c0f2fc6b99457093deba 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 UP17_09490 8d1631fc112ac8e2b10fa5e5ddebbf4f 474 ProSitePatterns PS00218 Amino acid permeases signature. 34 65 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_09490 8d1631fc112ac8e2b10fa5e5ddebbf4f 474 Pfam PF00324 Amino acid permease 9 461 7.0E-138 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_09490 8d1631fc112ac8e2b10fa5e5ddebbf4f 474 Gene3D G3DSA:1.20.1740.10 1 467 8.7E-61 T 11-10-2018 UP17_09490 8d1631fc112ac8e2b10fa5e5ddebbf4f 474 PIRSF PIRSF006060 1 474 8.0E-85 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_05455 6f8e146b55b83e4c0993e0924293fc89 161 Gene3D G3DSA:3.30.428.10 8 160 3.2E-16 T 11-10-2018 IPR036265 HIT-like superfamily UP17_05455 6f8e146b55b83e4c0993e0924293fc89 161 SUPERFAMILY SSF54197 15 131 1.27E-15 T 11-10-2018 IPR036265 HIT-like superfamily UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 401 4.6E-92 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 Pfam PF13840 ACT domain 335 398 2.4E-20 T 11-10-2018 IPR027795 CASTOR, ACT domain UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 Pfam PF00696 Amino acid kinase family 2 235 7.0E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 Gene3D G3DSA:3.30.2130.10 256 406 3.6E-34 T 11-10-2018 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 2.8E-136 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 Gene3D G3DSA:3.40.1160.10 1 255 2.3E-80 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 PIRSF PIRSF000726 1 65 5.9E-9 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 PIRSF PIRSF000726 57 406 7.1E-89 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 SUPERFAMILY SSF55021 260 346 5.83E-14 T 11-10-2018 UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 SUPERFAMILY SSF53633 3 246 4.45E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_08065 4e4db6664ac2d153980fe3cde9ff20fc 406 SUPERFAMILY SSF55021 335 403 3.66E-16 T 11-10-2018 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 SUPERFAMILY SSF56014 413 526 3.01E-19 T 11-10-2018 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 Gene3D G3DSA:3.40.1010.10 1 119 1.2E-32 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 216 1.4E-37 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 Gene3D G3DSA:3.30.413.10 409 534 3.0E-15 T 11-10-2018 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 Gene3D G3DSA:3.30.950.10 120 250 6.4E-53 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 7 249 3.5E-100 T 11-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 448 464 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 SUPERFAMILY SSF53790 4 259 5.89E-59 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_10400 41542f8e9dcdb175806b3977f400939f 551 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 428 526 5.5E-6 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 PIRSF PIRSF005419 1 678 1.3E-255 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 Gene3D G3DSA:1.10.490.80 577 675 1.0E-28 T 11-10-2018 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 Pfam PF00771 FHIPEP family 15 667 3.8E-271 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 Gene3D G3DSA:3.40.30.60 342 485 3.2E-53 T 11-10-2018 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 7.5E-273 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 11-10-2018 IPR025505 FHIPEP conserved site UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 Gene3D G3DSA:1.10.8.540 486 575 6.7E-30 T 11-10-2018 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 8.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 8.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 8.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 8.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 8.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_07870 19114cdeb4ea5db2d11296bcd84db1fe 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 8.1E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 UP17_02490 ade14db959380aac727bc345d058b269 120 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 3.2E-32 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 UP17_02490 ade14db959380aac727bc345d058b269 120 SUPERFAMILY SSF54913 6 118 5.72E-33 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta UP17_02490 ade14db959380aac727bc345d058b269 120 SMART SM00938 8 109 3.5E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 UP17_02490 ade14db959380aac727bc345d058b269 120 Gene3D G3DSA:3.30.70.120 1 116 1.5E-38 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_02490 ade14db959380aac727bc345d058b269 120 PRINTS PR00340 P-II protein signature 6 21 5.2E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 UP17_02490 ade14db959380aac727bc345d058b269 120 PRINTS PR00340 P-II protein signature 87 107 5.2E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 UP17_02490 ade14db959380aac727bc345d058b269 120 PRINTS PR00340 P-II protein signature 27 45 5.2E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 UP17_02490 ade14db959380aac727bc345d058b269 120 PRINTS PR00340 P-II protein signature 56 79 5.2E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 UP17_02490 ade14db959380aac727bc345d058b269 120 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 UP17_21000 55ae012dc38ab37bfabe5bc86aa02fc8 257 Pfam PF12706 Beta-lactamase superfamily domain 20 168 1.4E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_21000 55ae012dc38ab37bfabe5bc86aa02fc8 257 SUPERFAMILY SSF56281 1 253 7.86E-20 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_21000 55ae012dc38ab37bfabe5bc86aa02fc8 257 Gene3D G3DSA:3.60.15.10 1 253 2.0E-65 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_16940 801595dc8dab2dff62fd969c43b78ab8 229 Pfam PF07423 Protein of unknown function (DUF1510) 3 223 3.0E-63 T 11-10-2018 IPR009988 Protein of unknown function DUF1510 UP17_00270 796955464057811abd37fb300fcff576 289 SUPERFAMILY SSF55060 161 281 3.6E-31 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily UP17_00270 796955464057811abd37fb300fcff576 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 35.774 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 UP17_00270 796955464057811abd37fb300fcff576 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 286 1.4E-106 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 UP17_00270 796955464057811abd37fb300fcff576 289 Gene3D G3DSA:3.30.230.10 1 158 5.4E-61 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_00270 796955464057811abd37fb300fcff576 289 SUPERFAMILY SSF54211 5 158 1.21E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_00270 796955464057811abd37fb300fcff576 289 Gene3D G3DSA:3.30.70.890 162 284 3.3E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily UP17_00270 796955464057811abd37fb300fcff576 289 Pfam PF08544 GHMP kinases C terminal 197 270 2.9E-9 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain UP17_00270 796955464057811abd37fb300fcff576 289 PIRSF PIRSF010376 2 288 3.4E-98 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 UP17_00270 796955464057811abd37fb300fcff576 289 Pfam PF00288 GHMP kinases N terminal domain 87 144 2.0E-13 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 UP17_25845 6018fb8f258096910428d4b46878ce12 67 Gene3D G3DSA:1.10.8.910 8 67 7.2E-32 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily UP17_25845 6018fb8f258096910428d4b46878ce12 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_25845 6018fb8f258096910428d4b46878ce12 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_25845 6018fb8f258096910428d4b46878ce12 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 4.0E-23 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 UP17_25465 d9c2e9b2b9a707ca2330d1e019b727ad 482 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_25465 d9c2e9b2b9a707ca2330d1e019b727ad 482 PIRSF PIRSF006060 2 478 1.1E-88 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_25465 d9c2e9b2b9a707ca2330d1e019b727ad 482 Pfam PF00324 Amino acid permease 20 476 2.6E-141 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_25465 d9c2e9b2b9a707ca2330d1e019b727ad 482 Gene3D G3DSA:1.20.1740.10 10 479 1.6E-62 T 11-10-2018 UP17_11130 9bed6348d55c482eb6b24999e5e7e071 183 Gene3D G3DSA:3.40.50.850 3 183 6.4E-50 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_11130 9bed6348d55c482eb6b24999e5e7e071 183 Pfam PF00857 Isochorismatase family 5 179 6.6E-35 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 UP17_11130 9bed6348d55c482eb6b24999e5e7e071 183 SUPERFAMILY SSF52499 2 181 7.2E-49 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_04965 d3f6deae1ff0faded09de1dc5b0a6a0c 170 Gene3D G3DSA:2.160.10.10 1 169 2.1E-63 T 11-10-2018 UP17_04965 d3f6deae1ff0faded09de1dc5b0a6a0c 170 SUPERFAMILY SSF51161 4 167 1.25E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_04965 d3f6deae1ff0faded09de1dc5b0a6a0c 170 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 56 85 0.073 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_04965 d3f6deae1ff0faded09de1dc5b0a6a0c 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 2.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_04965 d3f6deae1ff0faded09de1dc5b0a6a0c 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 44 3.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_03120 d96838f2dabb5274ae8bc6703cb62f71 250 SMART SM00849 34 235 7.4E-26 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_03120 d96838f2dabb5274ae8bc6703cb62f71 250 SUPERFAMILY SSF56281 24 236 1.57E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_03120 d96838f2dabb5274ae8bc6703cb62f71 250 Gene3D G3DSA:3.60.15.10 1 241 5.3E-98 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_03120 d96838f2dabb5274ae8bc6703cb62f71 250 Pfam PF00753 Metallo-beta-lactamase superfamily 33 235 2.5E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_15840 b8613ced6ad5933b99d51e4f92ccd7fe 110 Pfam PF08863 YolD-like protein 14 107 3.4E-27 T 11-10-2018 IPR014962 YolD-like protein UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Gene3D G3DSA:1.10.486.10 633 795 1.2E-63 T 11-10-2018 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 14 1243 0.0 T 11-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Gene3D G3DSA:3.40.50.300 352 500 9.8E-36 T 11-10-2018 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 SUPERFAMILY SSF52540 12 903 1.36E-115 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 12 1244 19.776 T 11-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Gene3D G3DSA:3.90.320.10 1002 1244 3.2E-83 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Pfam PF13361 UvrD-like helicase C-terminal domain 478 899 1.7E-33 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1064 1223 1.5E-9 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Gene3D G3DSA:3.40.50.300 10 190 2.0E-38 T 11-10-2018 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Gene3D G3DSA:1.10.274.50 801 861 5.3E-8 T 11-10-2018 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 467 1.4E-85 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 UP17_05705 fa3d5d940d0c480819a90aa98403b474 1244 SUPERFAMILY SSF52980 1025 1237 1.02E-39 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 UP17_17910 979756a7593bb36d46aa08d2c57f7205 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 544 1.8E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_17910 979756a7593bb36d46aa08d2c57f7205 565 SUPERFAMILY SSF56801 14 556 1.27E-159 T 11-10-2018 UP17_17910 979756a7593bb36d46aa08d2c57f7205 565 Pfam PF00501 AMP-binding enzyme 30 459 1.7E-114 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_17910 979756a7593bb36d46aa08d2c57f7205 565 Gene3D G3DSA:3.40.50.12780 14 451 7.5E-132 T 11-10-2018 UP17_17910 979756a7593bb36d46aa08d2c57f7205 565 Gene3D G3DSA:3.30.300.310 456 560 1.0E-33 T 11-10-2018 UP17_17910 979756a7593bb36d46aa08d2c57f7205 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_13390 98f52c8121fde161f779a948c7addda6 485 Hamap MF_01916 Cardiolipin synthase. 11 485 46.74 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 UP17_13390 98f52c8121fde161f779a948c7addda6 485 SMART SM00155 220 247 4.1E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_13390 98f52c8121fde161f779a948c7addda6 485 SMART SM00155 398 425 1.2E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_13390 98f52c8121fde161f779a948c7addda6 485 Pfam PF13091 PLD-like domain 138 280 3.9E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_13390 98f52c8121fde161f779a948c7addda6 485 Pfam PF13091 PLD-like domain 326 451 1.3E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_13390 98f52c8121fde161f779a948c7addda6 485 Gene3D G3DSA:3.30.870.10 314 457 1.8E-25 T 11-10-2018 UP17_13390 98f52c8121fde161f779a948c7addda6 485 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 485 8.2E-201 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 UP17_13390 98f52c8121fde161f779a948c7addda6 485 SUPERFAMILY SSF56024 90 315 8.3E-57 T 11-10-2018 UP17_13390 98f52c8121fde161f779a948c7addda6 485 PIRSF PIRSF000850 100 294 0.015 T 11-10-2018 UP17_13390 98f52c8121fde161f779a948c7addda6 485 PIRSF PIRSF000850 378 483 0.097 T 11-10-2018 UP17_13390 98f52c8121fde161f779a948c7addda6 485 PIRSF PIRSF000850 309 379 0.5 T 11-10-2018 UP17_13390 98f52c8121fde161f779a948c7addda6 485 Gene3D G3DSA:3.30.870.10 116 304 1.4E-47 T 11-10-2018 UP17_13390 98f52c8121fde161f779a948c7addda6 485 Pfam PF13396 Phospholipase_D-nuclease N-terminal 16 58 9.0E-12 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal UP17_13390 98f52c8121fde161f779a948c7addda6 485 SUPERFAMILY SSF56024 272 472 2.2E-51 T 11-10-2018 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 1.6E-24 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 369 3.7E-48 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 376 37.751 T 11-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 8.7E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 PRINTS PR00084 Mannitol dehydrogenase signature 116 129 8.7E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 PRINTS PR00084 Mannitol dehydrogenase signature 152 165 8.7E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 8.7E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 SUPERFAMILY SSF48179 202 380 2.96E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 Gene3D G3DSA:1.10.1040.10 204 380 2.0E-62 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 Gene3D G3DSA:3.40.50.720 2 202 3.4E-69 T 11-10-2018 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 152 164 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 UP17_19155 cbfa4817f964940b3eaf77a28cd95aa9 381 SUPERFAMILY SSF51735 4 190 1.23E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 Gene3D G3DSA:1.10.490.70 1 147 2.6E-43 T 11-10-2018 IPR038284 Histidine kinase, N-terminal domain superfamily UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 Pfam PF09385 Histidine kinase N terminal 4 131 2.5E-44 T 11-10-2018 IPR018984 Histidine kinase, N-terminal UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 Pfam PF00512 His Kinase A (phospho-acceptor) domain 156 215 2.9E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 Gene3D G3DSA:1.10.287.130 148 215 2.4E-9 T 11-10-2018 UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 262 366 1.6E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 SUPERFAMILY SSF55874 209 365 9.95E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 SUPERFAMILY SSF47384 147 215 6.47E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 SMART SM00388 155 217 6.9E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 318 328 7.3E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 7.3E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 314 7.3E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 SMART SM00387 260 368 1.4E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_13265 c23698fc49ef211f25c313f9e75281aa 368 Gene3D G3DSA:3.30.565.10 217 367 9.4E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01880 31017661af308041ce29ba947ec97183 280 SUPERFAMILY SSF63520 58 170 7.19E-26 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 UP17_01880 31017661af308041ce29ba947ec97183 280 ProSitePatterns PS00654 PRD domain signature. 101 113 - T 11-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 UP17_01880 31017661af308041ce29ba947ec97183 280 Pfam PF03123 CAT RNA binding domain 5 60 4.4E-20 T 11-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 UP17_01880 31017661af308041ce29ba947ec97183 280 Pfam PF00874 PRD domain 81 166 4.7E-21 T 11-10-2018 IPR011608 PRD domain GO:0006355 UP17_01880 31017661af308041ce29ba947ec97183 280 Pfam PF00874 PRD domain 185 274 6.3E-20 T 11-10-2018 IPR011608 PRD domain GO:0006355 UP17_01880 31017661af308041ce29ba947ec97183 280 SUPERFAMILY SSF63520 178 276 4.97E-24 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 UP17_01880 31017661af308041ce29ba947ec97183 280 Gene3D G3DSA:1.20.890.100 169 223 4.6E-22 T 11-10-2018 UP17_01880 31017661af308041ce29ba947ec97183 280 SUPERFAMILY SSF50151 4 55 1.44E-13 T 11-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 UP17_01880 31017661af308041ce29ba947ec97183 280 Gene3D G3DSA:2.30.24.10 1 69 1.1E-21 T 11-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 UP17_01880 31017661af308041ce29ba947ec97183 280 SMART SM01061 4 62 3.7E-22 T 11-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 UP17_01880 31017661af308041ce29ba947ec97183 280 Gene3D G3DSA:1.20.58.1950 225 277 4.4E-25 T 11-10-2018 UP17_01880 31017661af308041ce29ba947ec97183 280 Gene3D G3DSA:1.10.1790.10 70 168 1.3E-26 T 11-10-2018 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 Gene3D G3DSA:1.20.120.140 6 307 1.9E-130 T 11-10-2018 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 Gene3D G3DSA:1.10.260.30 328 444 4.1E-43 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 SUPERFAMILY SSF47446 328 430 5.56E-38 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 Gene3D G3DSA:3.40.50.300 91 286 1.9E-130 T 11-10-2018 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.1E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 2.5E-80 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 SMART SM00382 100 275 9.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 SMART SM00963 2 87 6.4E-34 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 446 35.69 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 5.2E-192 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 SUPERFAMILY SSF52540 43 355 1.9E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 SMART SM00962 101 297 2.8E-122 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07635 e3c6a40f1a3e49ec59efb119b49376e8 446 Pfam PF02978 Signal peptide binding domain 328 427 1.2E-33 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 UP17_06350 a8eb21c980d961633d62c188fc976de5 292 SUPERFAMILY SSF161098 21 273 4.19E-52 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06350 a8eb21c980d961633d62c188fc976de5 292 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 20 278 1.8E-94 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 UP17_06350 a8eb21c980d961633d62c188fc976de5 292 Gene3D G3DSA:1.10.3720.10 23 281 5.4E-60 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06350 a8eb21c980d961633d62c188fc976de5 292 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 22 280 4.1E-123 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 UP17_06350 a8eb21c980d961633d62c188fc976de5 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 275 4.3E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_20180 311aba8d35d0b634f5f28f32dfa5cacb 483 Pfam PF02554 Carbon starvation protein CstA 4 205 1.5E-33 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 UP17_20180 311aba8d35d0b634f5f28f32dfa5cacb 483 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 317 427 2.6E-20 T 11-10-2018 IPR025299 CstA, C-terminal domain UP17_01330 d30014d00cfd320971050820cfc45c81 360 Pfam PF07478 D-ala D-ala ligase C-terminus 140 343 1.5E-79 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01330 d30014d00cfd320971050820cfc45c81 360 Gene3D G3DSA:3.30.1490.20 147 219 5.0E-31 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_01330 d30014d00cfd320971050820cfc45c81 360 Pfam PF01820 D-ala D-ala ligase N-terminus 4 121 8.5E-31 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01330 d30014d00cfd320971050820cfc45c81 360 PIRSF PIRSF039102 1 355 6.6E-117 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01330 d30014d00cfd320971050820cfc45c81 360 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 289 317 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01330 d30014d00cfd320971050820cfc45c81 360 Gene3D G3DSA:3.40.50.20 1 142 2.0E-36 T 11-10-2018 UP17_01330 d30014d00cfd320971050820cfc45c81 360 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 99 110 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01330 d30014d00cfd320971050820cfc45c81 360 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 347 42.144 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_01330 d30014d00cfd320971050820cfc45c81 360 Gene3D G3DSA:3.30.470.20 220 360 5.3E-51 T 11-10-2018 UP17_01330 d30014d00cfd320971050820cfc45c81 360 SUPERFAMILY SSF52440 1 131 2.59E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_01330 d30014d00cfd320971050820cfc45c81 360 SUPERFAMILY SSF56059 132 351 1.48E-62 T 11-10-2018 UP17_01330 d30014d00cfd320971050820cfc45c81 360 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 346 9.2E-116 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_08865 f4738505d12e45b6521a4e4b92dac45a 369 Gene3D G3DSA:3.30.390.10 1 356 5.3E-139 T 11-10-2018 IPR029017 Enolase-like, N-terminal UP17_08865 f4738505d12e45b6521a4e4b92dac45a 369 SUPERFAMILY SSF51604 112 362 3.28E-64 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_08865 f4738505d12e45b6521a4e4b92dac45a 369 SUPERFAMILY SSF54826 1 125 8.4E-36 T 11-10-2018 UP17_08865 f4738505d12e45b6521a4e4b92dac45a 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 124 2.4E-24 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain UP17_08865 f4738505d12e45b6521a4e4b92dac45a 369 Gene3D G3DSA:3.20.20.120 116 350 5.3E-139 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_08865 f4738505d12e45b6521a4e4b92dac45a 369 Pfam PF13378 Enolase C-terminal domain-like 145 356 2.5E-46 T 11-10-2018 IPR029065 Enolase C-terminal domain-like UP17_08865 f4738505d12e45b6521a4e4b92dac45a 369 SMART SM00922 142 239 3.1E-24 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal UP17_06055 bd3017009979095575987a9a890bf70f 264 Hamap MF_00361 NAD kinase [nadK]. 1 263 23.924 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 UP17_06055 bd3017009979095575987a9a890bf70f 264 Pfam PF01513 ATP-NAD kinase 29 183 2.0E-22 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 UP17_06055 bd3017009979095575987a9a890bf70f 264 SUPERFAMILY SSF111331 15 261 4.71E-63 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily UP17_06055 bd3017009979095575987a9a890bf70f 264 Gene3D G3DSA:2.60.200.30 102 240 1.1E-97 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 UP17_06055 bd3017009979095575987a9a890bf70f 264 Gene3D G3DSA:3.40.50.10330 16 262 1.1E-97 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Gene3D G3DSA:2.20.25.90 261 316 8.8E-19 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Gene3D G3DSA:3.30.70.20 130 212 1.6E-19 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Gene3D G3DSA:3.40.50.740 323 779 3.4E-162 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 SMART SM00929 85 126 6.0E-13 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 262 315 6.3E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 87 124 3.0E-11 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 SMART SM00926 261 315 1.4E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Gene3D G3DSA:3.10.20.740 6 126 1.6E-30 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Pfam PF01568 Molydopterin dinucleotide binding domain 824 931 2.1E-19 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Gene3D G3DSA:2.40.40.20 815 942 1.0E-26 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 SUPERFAMILY SSF54862 135 218 1.34E-16 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Gene3D G3DSA:3.40.228.10 396 595 3.4E-162 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 PIRSF PIRSF036643 1 968 0.0 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 SUPERFAMILY SSF53706 255 785 1.7E-191 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 266 934 3.5E-247 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 76 3.0E-14 T 11-10-2018 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Pfam PF00384 Molybdopterin oxidoreductase 318 741 1.4E-88 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 SUPERFAMILY SSF54292 6 128 6.29E-31 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 Pfam PF12838 4Fe-4S dicluster domain 150 208 9.4E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_23400 1f6a9b527e70175eb8104a5662da4c93 979 SUPERFAMILY SSF50692 789 936 8.36E-34 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 10 430 2.1E-158 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 Gene3D G3DSA:2.40.37.10 17 427 1.1E-155 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 SUPERFAMILY SSF51419 30 299 1.11E-76 T 11-10-2018 IPR029066 PLP-binding barrel UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 296 1.6E-71 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 3.0E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 2.9E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 2.9E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 2.9E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 2.9E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 2.9E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 Gene3D G3DSA:3.20.20.10 38 297 1.1E-155 T 11-10-2018 IPR029066 PLP-binding barrel UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 41.216 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 234 250 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 SUPERFAMILY SSF50621 281 431 1.65E-52 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 UP17_15710 ce900acbb6eea8628d999c944f6bf8c9 442 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 33 388 1.9E-16 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 UP17_16455 8c7c2043c3905f254cf2b87094754090 323 Gene3D G3DSA:3.30.420.40 8 316 3.6E-108 T 11-10-2018 UP17_16455 8c7c2043c3905f254cf2b87094754090 323 Gene3D G3DSA:3.30.420.40 130 303 3.6E-108 T 11-10-2018 UP17_16455 8c7c2043c3905f254cf2b87094754090 323 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 320 2.3E-119 T 11-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 UP17_16455 8c7c2043c3905f254cf2b87094754090 323 ProSitePatterns PS01125 ROK family signature. 139 166 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 UP17_16455 8c7c2043c3905f254cf2b87094754090 323 SUPERFAMILY SSF53067 5 320 5.71E-70 T 11-10-2018 UP17_16455 8c7c2043c3905f254cf2b87094754090 323 Pfam PF00480 ROK family 7 319 9.8E-73 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 UP17_08485 55e7344f39cdbdcb58d054b3e8e378f0 259 SMART SM00382 32 219 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_08485 55e7344f39cdbdcb58d054b3e8e378f0 259 Pfam PF00005 ABC transporter 23 171 2.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_08485 55e7344f39cdbdcb58d054b3e8e378f0 259 Gene3D G3DSA:3.40.50.300 1 256 1.8E-66 T 11-10-2018 UP17_08485 55e7344f39cdbdcb58d054b3e8e378f0 259 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_08485 55e7344f39cdbdcb58d054b3e8e378f0 259 SUPERFAMILY SSF52540 3 230 4.31E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_22690 b7acb30ab5ced7515e9b6a15e272a6b2 152 SUPERFAMILY SSF109854 3 136 4.58E-26 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_22690 b7acb30ab5ced7515e9b6a15e272a6b2 152 Gene3D G3DSA:1.20.120.450 1 152 4.4E-39 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_22690 b7acb30ab5ced7515e9b6a15e272a6b2 152 Pfam PF05163 DinB family 3 145 1.2E-26 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 Pfam PF12419 SNF2 Helicase protein 294 422 6.4E-36 T 11-10-2018 IPR022138 Helicase SWF/SNF-related UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 SMART SM00490 851 934 1.0E-23 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 Pfam PF00176 SNF2 family N-terminal domain 491 803 1.9E-60 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 SUPERFAMILY SSF52540 458 733 8.09E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 SUPERFAMILY SSF52540 737 987 2.4E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 Gene3D G3DSA:3.40.50.10810 548 734 2.2E-49 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 Gene3D G3DSA:3.40.50.10810 478 546 1.5E-13 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 SMART SM00487 473 705 9.8E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 Pfam PF00271 Helicase conserved C-terminal domain 822 934 6.3E-21 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 Gene3D G3DSA:3.40.50.300 743 948 6.4E-88 T 11-10-2018 UP17_23955 afaa351647b6f8433b48750f0fc67e54 990 Gene3D G3DSA:1.20.120.850 757 983 6.4E-88 T 11-10-2018 UP17_01655 534a9a5640bf26c09a968d9aae1025b0 169 SUPERFAMILY SSF109854 2 166 1.68E-45 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_01655 534a9a5640bf26c09a968d9aae1025b0 169 Gene3D G3DSA:1.20.120.450 1 168 5.0E-46 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_01655 534a9a5640bf26c09a968d9aae1025b0 169 Pfam PF12867 DinB superfamily 34 163 1.3E-15 T 11-10-2018 IPR024775 DinB-like domain UP17_23020 54bc68c17750e051ca1105eab5655a85 78 SUPERFAMILY SSF117916 4 77 3.11E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily UP17_23020 54bc68c17750e051ca1105eab5655a85 78 Pfam PF01106 NifU-like domain 10 75 4.5E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 UP17_23020 54bc68c17750e051ca1105eab5655a85 78 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 65 8.0E-23 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 UP17_23020 54bc68c17750e051ca1105eab5655a85 78 Gene3D G3DSA:3.30.300.130 1 78 1.2E-32 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily UP17_04170 f718cb4d4e8a0ac505c233ea0495e8c9 160 Pfam PF00583 Acetyltransferase (GNAT) family 34 138 5.1E-9 T 11-10-2018 IPR000182 GNAT domain UP17_04170 f718cb4d4e8a0ac505c233ea0495e8c9 160 Gene3D G3DSA:3.40.630.30 3 157 3.1E-16 T 11-10-2018 UP17_04170 f718cb4d4e8a0ac505c233ea0495e8c9 160 SUPERFAMILY SSF55729 5 147 7.46E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_07355 9cbbc322e63fc5777fcaa4fe4b02cdf6 308 PIRSF PIRSF018571 1 301 7.2E-79 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 UP17_07355 9cbbc322e63fc5777fcaa4fe4b02cdf6 308 Pfam PF03419 Sporulation factor SpoIIGA 2 298 4.7E-78 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 UP17_07355 9cbbc322e63fc5777fcaa4fe4b02cdf6 308 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 299 7.8E-81 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 UP17_14275 d7f613b899f4763b81b6d5104be74076 423 SUPERFAMILY SSF55031 203 310 3.14E-13 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_14275 d7f613b899f4763b81b6d5104be74076 423 Pfam PF01546 Peptidase family M20/M25/M40 97 414 4.6E-37 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_14275 d7f613b899f4763b81b6d5104be74076 423 Pfam PF07687 Peptidase dimerisation domain 202 311 7.6E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_14275 d7f613b899f4763b81b6d5104be74076 423 Gene3D G3DSA:3.30.70.360 204 330 2.8E-137 T 11-10-2018 UP17_14275 d7f613b899f4763b81b6d5104be74076 423 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 1.9E-113 T 11-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase UP17_14275 d7f613b899f4763b81b6d5104be74076 423 SUPERFAMILY SSF53187 6 419 5.14E-58 T 11-10-2018 UP17_14275 d7f613b899f4763b81b6d5104be74076 423 Gene3D G3DSA:3.40.630.10 27 419 2.8E-137 T 11-10-2018 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 ProSitePatterns PS00321 recA signature. 212 220 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 SUPERFAMILY SSF52540 3 266 4.22E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 323 1.3E-175 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 Pfam PF00154 recA bacterial DNA recombination protein 7 267 7.4E-147 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 SUPERFAMILY SSF54752 267 325 1.44E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 Gene3D G3DSA:3.30.250.10 267 342 3.2E-27 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 Hamap MF_00268 Protein RecA [recA]. 4 328 53.253 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 PRINTS PR00142 RecA protein signature 242 271 1.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 PRINTS PR00142 RecA protein signature 209 237 1.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 PRINTS PR00142 RecA protein signature 164 193 1.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 PRINTS PR00142 RecA protein signature 296 313 1.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 PRINTS PR00142 RecA protein signature 92 121 1.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 PRINTS PR00142 RecA protein signature 126 155 1.8E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 SMART SM00382 56 227 5.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_08170 b1815f143d53f9c7271ad509b1287d5f 348 Gene3D G3DSA:3.40.50.300 25 266 4.9E-83 T 11-10-2018 UP17_15510 e92b62370155ca1597996796d2ce4400 61 Pfam PF17313 Family of unknown function (DUF5359) 1 56 1.3E-21 T 11-10-2018 IPR035281 Protein of unknown function DUF5359 UP17_24520 7e7a076833acfc5c0990d7669c3f9c12 158 Gene3D G3DSA:3.90.960.10 2 158 3.2E-50 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 UP17_24520 7e7a076833acfc5c0990d7669c3f9c12 158 SUPERFAMILY SSF55826 6 154 2.75E-38 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 UP17_24520 7e7a076833acfc5c0990d7669c3f9c12 158 PIRSF PIRSF006181 1 158 1.0E-58 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC UP17_24520 7e7a076833acfc5c0990d7669c3f9c12 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 155 1.5E-56 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC UP17_24520 7e7a076833acfc5c0990d7669c3f9c12 158 Pfam PF04073 Aminoacyl-tRNA editing domain 35 146 9.7E-24 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 UP17_24565 bb5b21cde4028b48ce6bc301d883de40 191 PIRSF PIRSF006135 5 188 2.2E-38 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 UP17_24565 bb5b21cde4028b48ce6bc301d883de40 191 Gene3D G3DSA:3.40.50.300 6 186 1.2E-40 T 11-10-2018 UP17_24565 bb5b21cde4028b48ce6bc301d883de40 191 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 8 184 5.9E-36 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 UP17_24565 bb5b21cde4028b48ce6bc301d883de40 191 SUPERFAMILY SSF52540 7 186 1.72E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23535 c051088c5d94728dbe154954a366e9e4 500 Gene3D G3DSA:1.25.40.10 7 136 3.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 SMART SM00028 152 185 64.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 SMART SM00028 289 322 220.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 SMART SM00028 89 122 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 SMART SM00028 20 53 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 SMART SM00028 186 219 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 SUPERFAMILY SSF48452 22 121 1.64E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 Pfam PF13432 Tetratricopeptide repeat 158 219 2.2E-6 T 11-10-2018 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 Gene3D G3DSA:1.25.40.10 141 326 1.9E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_23535 c051088c5d94728dbe154954a366e9e4 500 SUPERFAMILY SSF48452 157 321 6.83E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_10045 d15730b939481e24073d0a3cb498b293 664 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 137 572 4.8E-96 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit UP17_10045 d15730b939481e24073d0a3cb498b293 664 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 37 642 3.9E-227 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ UP17_06500 0ae55b3a49c356644c1a8d2f206044e3 341 SMART SM00382 34 233 9.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_06500 0ae55b3a49c356644c1a8d2f206044e3 341 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 292 3.9E-15 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_06500 0ae55b3a49c356644c1a8d2f206044e3 341 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 1.8E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_06500 0ae55b3a49c356644c1a8d2f206044e3 341 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_06500 0ae55b3a49c356644c1a8d2f206044e3 341 Pfam PF00005 ABC transporter 26 183 5.5E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_06500 0ae55b3a49c356644c1a8d2f206044e3 341 Gene3D G3DSA:3.40.50.300 3 335 5.1E-96 T 11-10-2018 UP17_06500 0ae55b3a49c356644c1a8d2f206044e3 341 SUPERFAMILY SSF52540 5 255 6.17E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01645 9af03a04912735afce9e4a147d78c46a 215 Gene3D G3DSA:3.30.559.10 2 208 5.6E-62 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_01645 9af03a04912735afce9e4a147d78c46a 215 PIRSF PIRSF000440 1 214 2.5E-80 T 11-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 UP17_01645 9af03a04912735afce9e4a147d78c46a 215 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 186 196 - T 11-10-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 UP17_01645 9af03a04912735afce9e4a147d78c46a 215 Pfam PF00302 Chloramphenicol acetyltransferase 3 205 2.4E-77 T 11-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 UP17_01645 9af03a04912735afce9e4a147d78c46a 215 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 13 198 2.0E-83 T 11-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 UP17_01645 9af03a04912735afce9e4a147d78c46a 215 SUPERFAMILY SSF52777 1 210 2.72E-69 T 11-10-2018 UP17_01645 9af03a04912735afce9e4a147d78c46a 215 SMART SM01059 1 205 1.8E-98 T 11-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 UP17_11725 0ed461ffffa319e2838b225fa3726acc 360 SMART SM00922 141 239 7.0E-24 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal UP17_11725 0ed461ffffa319e2838b225fa3726acc 360 Gene3D G3DSA:3.30.390.10 1 353 7.2E-114 T 11-10-2018 IPR029017 Enolase-like, N-terminal UP17_11725 0ed461ffffa319e2838b225fa3726acc 360 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 124 5.0E-20 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain UP17_11725 0ed461ffffa319e2838b225fa3726acc 360 Pfam PF13378 Enolase C-terminal domain-like 145 353 5.5E-53 T 11-10-2018 IPR029065 Enolase C-terminal domain-like UP17_11725 0ed461ffffa319e2838b225fa3726acc 360 SUPERFAMILY SSF54826 1 125 3.93E-29 T 11-10-2018 UP17_11725 0ed461ffffa319e2838b225fa3726acc 360 SUPERFAMILY SSF51604 113 355 7.47E-68 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_11725 0ed461ffffa319e2838b225fa3726acc 360 Gene3D G3DSA:3.20.20.120 116 351 7.2E-114 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 SUPERFAMILY SSF54106 25 70 1.44E-9 T 11-10-2018 UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 84 207 1.0E-57 T 11-10-2018 IPR014258 CAP domain, YkwD-like UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 Gene3D G3DSA:3.40.33.10 80 208 2.5E-48 T 11-10-2018 IPR035940 CAP superfamily UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 Pfam PF01476 LysM domain 26 70 1.4E-10 T 11-10-2018 IPR018392 LysM domain UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 Pfam PF00188 Cysteine-rich secretory protein family 89 205 5.8E-24 T 11-10-2018 IPR014044 CAP domain UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 Gene3D G3DSA:3.10.350.10 13 79 1.3E-13 T 11-10-2018 IPR036779 LysM domain superfamily UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 SMART SM00257 25 70 2.0E-13 T 11-10-2018 IPR018392 LysM domain UP17_13215 b9adfa4a3a2a1b20f975d3b5a69aac24 208 SUPERFAMILY SSF55797 82 205 3.79E-28 T 11-10-2018 IPR035940 CAP superfamily UP17_22925 7e3cfee6eac43f11825530b8437017a4 187 Gene3D G3DSA:3.40.50.1000 1 169 9.6E-26 T 11-10-2018 IPR023214 HAD superfamily UP17_22925 7e3cfee6eac43f11825530b8437017a4 187 PIRSF PIRSF021362 1 187 8.7E-53 T 11-10-2018 IPR009206 Nucleotidase, putative UP17_22925 7e3cfee6eac43f11825530b8437017a4 187 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 4 185 2.2E-10 T 11-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 UP17_22925 7e3cfee6eac43f11825530b8437017a4 187 SUPERFAMILY SSF56784 1 169 2.76E-19 T 11-10-2018 IPR036412 HAD-like superfamily UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 Gene3D G3DSA:4.10.320.10 135 187 4.7E-19 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 Gene3D G3DSA:2.40.50.100 2 81 1.4E-28 T 11-10-2018 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 SUPERFAMILY SSF52777 218 450 1.25E-87 T 11-10-2018 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 Gene3D G3DSA:3.30.559.10 206 448 2.8E-89 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 SUPERFAMILY SSF51230 3 88 4.32E-27 T 11-10-2018 IPR011053 Single hybrid motif UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 SUPERFAMILY SSF47005 140 185 6.41E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 Pfam PF02817 e3 binding domain 146 180 3.3E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 222 450 1.2E-88 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 UP17_06965 160a68a981e049a5b6f86e8c5b269e0d 452 Pfam PF00364 Biotin-requiring enzyme 4 75 4.5E-26 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_24190 69d917fb2dbf678e2fb7819c7bc309c7 380 Gene3D G3DSA:3.40.50.2000 191 351 2.1E-151 T 11-10-2018 UP17_24190 69d917fb2dbf678e2fb7819c7bc309c7 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 367 5.5E-162 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 UP17_24190 69d917fb2dbf678e2fb7819c7bc309c7 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 364 2.0E-117 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 UP17_24190 69d917fb2dbf678e2fb7819c7bc309c7 380 Gene3D G3DSA:3.40.50.2000 7 362 2.1E-151 T 11-10-2018 UP17_24190 69d917fb2dbf678e2fb7819c7bc309c7 380 SUPERFAMILY SSF53756 4 375 4.22E-134 T 11-10-2018 UP17_20275 3d916cb1fa3c0938b5bd9d7b6d7ed039 129 Gene3D G3DSA:1.10.10.810 4 117 2.2E-33 T 11-10-2018 UP17_20275 3d916cb1fa3c0938b5bd9d7b6d7ed039 129 SUPERFAMILY SSF159888 7 119 1.57E-37 T 11-10-2018 UP17_20275 3d916cb1fa3c0938b5bd9d7b6d7ed039 129 Pfam PF08818 Domain of unknown function (DU1801) 22 111 3.5E-14 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 UP17_11760 6454e5165b14f7249ee9f8726c88e97c 137 Gene3D G3DSA:3.10.180.10 7 137 3.8E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_11760 6454e5165b14f7249ee9f8726c88e97c 137 SUPERFAMILY SSF54593 4 135 4.95E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_11760 6454e5165b14f7249ee9f8726c88e97c 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 132 7.2E-14 T 11-10-2018 IPR028973 PhnB-like UP17_22810 700a179335314ed9d2d5fb9aeb458789 166 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 49 1.3E-6 T 11-10-2018 UP17_22810 700a179335314ed9d2d5fb9aeb458789 166 Gene3D G3DSA:3.30.70.920 56 153 3.3E-22 T 11-10-2018 UP17_22810 700a179335314ed9d2d5fb9aeb458789 166 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 1.7E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain UP17_22810 700a179335314ed9d2d5fb9aeb458789 166 SUPERFAMILY SSF46785 3 61 1.22E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_22810 700a179335314ed9d2d5fb9aeb458789 166 SUPERFAMILY SSF54909 66 147 6.57E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_22810 700a179335314ed9d2d5fb9aeb458789 166 Gene3D G3DSA:1.10.10.10 1 55 2.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_22810 700a179335314ed9d2d5fb9aeb458789 166 SMART SM00344 3 114 4.7E-6 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_21995 31acc0eeca467e590da039d0d1768107 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 803 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 SUPERFAMILY SSF47323 617 803 1.07E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Gene3D G3DSA:3.40.50.620 32 570 1.4E-273 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_21995 31acc0eeca467e590da039d0d1768107 804 Gene3D G3DSA:2.30.210.10 571 587 1.4E-273 T 11-10-2018 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 5.7E-68 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Gene3D G3DSA:1.10.730.10 617 721 3.8E-13 T 11-10-2018 UP17_21995 31acc0eeca467e590da039d0d1768107 804 SUPERFAMILY SSF50677 224 410 2.83E-54 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Gene3D G3DSA:3.90.740.10 226 410 1.4E-273 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 UP17_21995 31acc0eeca467e590da039d0d1768107 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 767 3.7E-21 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Gene3D G3DSA:3.10.20.590 744 803 8.6E-21 T 11-10-2018 UP17_21995 31acc0eeca467e590da039d0d1768107 804 SUPERFAMILY SSF52374 3 623 1.04E-141 T 11-10-2018 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 407 602 6.5E-21 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 803 23.201 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 Pfam PF09334 tRNA synthetases class I (M) 39 170 1.9E-17 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_21995 31acc0eeca467e590da039d0d1768107 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_21995 31acc0eeca467e590da039d0d1768107 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 UP17_07855 50dec148d9ff802d5ffaae9184da6509 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 3 87 3.3E-32 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 UP17_07855 50dec148d9ff802d5ffaae9184da6509 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UP17_07855 50dec148d9ff802d5ffaae9184da6509 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UP17_07855 50dec148d9ff802d5ffaae9184da6509 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UP17_07855 50dec148d9ff802d5ffaae9184da6509 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.4E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UP17_07855 50dec148d9ff802d5ffaae9184da6509 89 PIRSF PIRSF004669 1 89 5.6E-34 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 UP17_11660 07af6ee5ac040d3758adbc2852b099e7 478 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_11660 07af6ee5ac040d3758adbc2852b099e7 478 Gene3D G3DSA:1.20.1740.10 9 476 1.9E-66 T 11-10-2018 UP17_11660 07af6ee5ac040d3758adbc2852b099e7 478 PIRSF PIRSF006060 1 474 3.4E-84 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_11660 07af6ee5ac040d3758adbc2852b099e7 478 Pfam PF00324 Amino acid permease 19 460 1.4E-122 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 SMART SM00382 199 345 2.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 SMART SM00382 601 754 3.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 8.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 8.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 8.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 8.8E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Gene3D G3DSA:3.40.50.300 349 548 2.4E-71 T 11-10-2018 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Gene3D G3DSA:1.10.1780.10 1 151 1.9E-29 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Gene3D G3DSA:3.40.50.300 158 348 6.0E-74 T 11-10-2018 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 SUPERFAMILY SSF52540 158 549 8.0E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 146 1.8E-8 T 11-10-2018 IPR004176 Clp, N-terminal UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 52 1.7E-6 T 11-10-2018 IPR004176 Clp, N-terminal UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 862 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 336 2.5E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 SUPERFAMILY SSF52540 550 843 6.23E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 SUPERFAMILY SSF81923 4 157 4.51E-37 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Gene3D G3DSA:3.40.50.300 554 770 7.6E-86 T 11-10-2018 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 766 2.3E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 845 1.0E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 SMART SM01086 772 862 1.9E-32 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_05925 79ed44d46bee90f8526eb8f99b211fe5 863 Gene3D G3DSA:1.10.8.60 772 863 9.4E-27 T 11-10-2018 UP17_08750 61203bdd061f93851e64362857ee1d2b 201 Gene3D G3DSA:3.40.50.1820 1 200 5.2E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_08750 61203bdd061f93851e64362857ee1d2b 201 SUPERFAMILY SSF53474 2 200 4.71E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_08750 61203bdd061f93851e64362857ee1d2b 201 Pfam PF01738 Dienelactone hydrolase family 87 188 1.9E-7 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SMART SM00091 370 437 0.34 T 11-10-2018 IPR000014 PAS domain UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SMART SM00091 244 309 0.17 T 11-10-2018 IPR000014 PAS domain UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Pfam PF13426 PAS domain 382 483 5.3E-14 T 11-10-2018 IPR000014 PAS domain UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Pfam PF13426 PAS domain 255 354 1.2E-12 T 11-10-2018 IPR000014 PAS domain UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Gene3D G3DSA:3.30.450.20 381 488 1.0E-28 T 11-10-2018 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 249 363 8.5E-17 T 11-10-2018 IPR000014 PAS domain UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 370 491 1.9E-19 T 11-10-2018 IPR000014 PAS domain UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Gene3D G3DSA:3.30.565.10 566 714 2.8E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SMART SM00388 499 564 4.5E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 671 7.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 709 7.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 690 7.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 657 7.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SUPERFAMILY SSF47384 493 562 6.87E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SMART SM00387 606 712 4.7E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SMART SM00086 315 356 6.4E-6 T 11-10-2018 IPR001610 PAC motif UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SMART SM00086 442 484 8.7E-10 T 11-10-2018 IPR001610 PAC motif UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Pfam PF00512 His Kinase A (phospho-acceptor) domain 500 562 1.7E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SUPERFAMILY SSF55785 382 484 1.74E-26 T 11-10-2018 IPR035965 PAS domain superfamily UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Gene3D G3DSA:3.30.450.20 247 380 8.1E-32 T 11-10-2018 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Gene3D G3DSA:1.10.287.130 489 563 3.3E-22 T 11-10-2018 UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 607 711 1.7E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SUPERFAMILY SSF55874 554 710 5.5E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_13570 51e59eb5ec49ab9dbcf67d15fc632021 715 SUPERFAMILY SSF55785 254 353 3.32E-27 T 11-10-2018 IPR035965 PAS domain superfamily UP17_19015 e02a563fff56dc68d75997060c422f0f 113 Pfam PF00893 Small Multidrug Resistance protein 4 92 1.6E-21 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 UP17_19015 e02a563fff56dc68d75997060c422f0f 113 Gene3D G3DSA:1.10.3730.20 3 107 1.9E-23 T 11-10-2018 UP17_19015 e02a563fff56dc68d75997060c422f0f 113 SUPERFAMILY SSF103481 8 101 1.96E-14 T 11-10-2018 UP17_19245 8207f6cfef52cfdf1c76401cbbea3843 245 Gene3D G3DSA:1.10.1660.10 1 139 8.7E-52 T 11-10-2018 UP17_19245 8207f6cfef52cfdf1c76401cbbea3843 245 SMART SM00422 3 72 3.9E-26 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_19245 8207f6cfef52cfdf1c76401cbbea3843 245 SUPERFAMILY SSF46955 3 113 3.04E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_19245 8207f6cfef52cfdf1c76401cbbea3843 245 Gene3D G3DSA:1.10.490.50 141 244 1.4E-21 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain UP17_19245 8207f6cfef52cfdf1c76401cbbea3843 245 SUPERFAMILY SSF89082 157 243 2.09E-28 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain UP17_19245 8207f6cfef52cfdf1c76401cbbea3843 245 Pfam PF13411 MerR HTH family regulatory protein 3 71 5.2E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_19245 8207f6cfef52cfdf1c76401cbbea3843 245 Pfam PF07739 TipAS antibiotic-recognition domain 130 238 3.1E-32 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 Gene3D G3DSA:1.25.40.10 2 291 8.9E-64 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 SMART SM00028 156 189 1.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 Pfam PF13424 Tetratricopeptide repeat 131 187 3.8E-7 T 11-10-2018 UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 SUPERFAMILY SSF48452 153 269 2.11E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 SUPERFAMILY SSF48452 66 191 1.87E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 SMART SM00530 8 62 6.6E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 Pfam PF01381 Helix-turn-helix 10 62 2.6E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_13220 aebf4505d2a4b8cf1183c627f5cd5d27 293 SUPERFAMILY SSF47413 4 64 1.3E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 PRINTS PR00046 Major sigma-70 factor signature 192 200 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 PRINTS PR00046 Major sigma-70 factor signature 316 328 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 PRINTS PR00046 Major sigma-70 factor signature 352 363 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 PRINTS PR00046 Major sigma-70 factor signature 168 181 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 PRINTS PR00046 Major sigma-70 factor signature 337 352 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 140 376 4.0E-125 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Gene3D G3DSA:1.10.601.10 139 216 5.1E-51 T 11-10-2018 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Gene3D G3DSA:1.10.601.10 104 138 4.5E-11 T 11-10-2018 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Pfam PF03979 Sigma-70 factor, region 1.1 18 90 3.9E-14 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Pfam PF04542 Sigma-70 region 2 144 213 3.8E-22 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Gene3D G3DSA:1.10.220.120 15 80 3.6E-7 T 11-10-2018 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Pfam PF04545 Sigma-70, region 4 312 365 5.2E-20 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 SUPERFAMILY SSF88659 274 375 3.36E-30 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Pfam PF04539 Sigma-70 region 3 223 299 6.6E-33 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 140 365 1.9E-39 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Gene3D G3DSA:1.10.10.10 217 292 8.7E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 337 363 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Gene3D G3DSA:1.10.10.10 305 377 2.8E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 SUPERFAMILY SSF88659 217 290 2.8E-23 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 SUPERFAMILY SSF88946 105 214 1.96E-54 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Pfam PF00140 Sigma-70 factor, region 1.2 106 139 7.6E-18 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 377 34.508 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 UP17_16635 d66b2c25f0ccf48b9ea60fd13059c477 377 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 168 181 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_23345 98ad0219c0ebb4be5aa192e5ece2e53d 373 Gene3D G3DSA:3.30.565.10 243 369 4.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23345 98ad0219c0ebb4be5aa192e5ece2e53d 373 Pfam PF07730 Histidine kinase 179 244 2.0E-21 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 UP17_23345 98ad0219c0ebb4be5aa192e5ece2e53d 373 SUPERFAMILY SSF55874 248 367 1.78E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 SUPERFAMILY SSF53223 16 194 2.02E-65 T 11-10-2018 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 Gene3D G3DSA:3.40.50.720 199 352 1.6E-142 T 11-10-2018 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 SMART SM00839 194 423 5.4E-96 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 192 423 1.6E-78 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 225 245 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 183 205 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 351 362 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 103 117 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 48 174 7.3E-54 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 111 124 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 Gene3D G3DSA:1.10.8.1210 379 425 1.2E-16 T 11-10-2018 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 PIRSF PIRSF000185 11 425 2.1E-172 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 SUPERFAMILY SSF51735 192 424 1.18E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 Gene3D G3DSA:1.10.8.1210 19 353 1.6E-142 T 11-10-2018 UP17_15540 8148d4285859cca315d24fb4432cc5e2 425 Gene3D G3DSA:3.40.50.10860 44 198 1.6E-142 T 11-10-2018 UP17_00190 2fca2000f10ac411dde3174976e1e7a3 146 Gene3D G3DSA:1.20.120.490 25 146 5.2E-38 T 11-10-2018 IPR024042 TM1646-like domain superfamily UP17_00190 2fca2000f10ac411dde3174976e1e7a3 146 SUPERFAMILY SSF158397 28 146 2.75E-33 T 11-10-2018 IPR024042 TM1646-like domain superfamily UP17_00190 2fca2000f10ac411dde3174976e1e7a3 146 Pfam PF03885 Protein of unknown function (DUF327) 12 145 3.2E-38 T 11-10-2018 IPR005585 Protein of unknown function DUF327 UP17_11990 5806dff02699101d92075e8fe5e8dd35 289 SUPERFAMILY SSF103481 198 286 1.7E-10 T 11-10-2018 UP17_11990 5806dff02699101d92075e8fe5e8dd35 289 SUPERFAMILY SSF103481 36 142 2.88E-8 T 11-10-2018 UP17_11990 5806dff02699101d92075e8fe5e8dd35 289 Pfam PF00892 EamA-like transporter family 151 284 2.6E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_11990 5806dff02699101d92075e8fe5e8dd35 289 Pfam PF00892 EamA-like transporter family 2 139 1.8E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_08035 9b7abe71a1c6d569ad6cf49da89a02e0 319 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 46 313 7.4E-123 T 11-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY UP17_08035 9b7abe71a1c6d569ad6cf49da89a02e0 319 Gene3D G3DSA:3.20.20.370 84 317 2.0E-57 T 11-10-2018 UP17_08035 9b7abe71a1c6d569ad6cf49da89a02e0 319 Pfam PF01522 Polysaccharide deacetylase 142 246 2.7E-29 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 UP17_08035 9b7abe71a1c6d569ad6cf49da89a02e0 319 SUPERFAMILY SSF88713 111 312 9.1E-58 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_03460 6c58a5d169512d990ddd9470da23a7a6 181 Gene3D G3DSA:1.20.1270.400 88 180 4.5E-9 T 11-10-2018 UP17_03460 6c58a5d169512d990ddd9470da23a7a6 181 Pfam PF12840 Helix-turn-helix domain 5 64 1.9E-10 T 11-10-2018 UP17_03460 6c58a5d169512d990ddd9470da23a7a6 181 SUPERFAMILY SSF46785 5 112 1.17E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03460 6c58a5d169512d990ddd9470da23a7a6 181 Gene3D G3DSA:1.10.10.10 1 82 2.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01195 3c5ebff42f108d05259eace4db388934 233 SUPERFAMILY SSF52266 1 224 3.66E-35 T 11-10-2018 UP17_01195 3c5ebff42f108d05259eace4db388934 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 211 2.0E-19 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain UP17_01195 3c5ebff42f108d05259eace4db388934 233 Gene3D G3DSA:3.40.50.1110 1 225 9.4E-40 T 11-10-2018 IPR036514 SGNH hydrolase superfamily UP17_19445 d2fdf0f99054473e36b234375e3915d4 187 Pfam PF01471 Putative peptidoglycan binding domain 59 110 1.2E-13 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_19445 d2fdf0f99054473e36b234375e3915d4 187 SUPERFAMILY SSF47090 46 112 6.02E-19 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_19445 d2fdf0f99054473e36b234375e3915d4 187 Gene3D G3DSA:1.10.101.10 40 120 3.9E-24 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_25515 81847dc54c545960077d97d4838edd88 298 Pfam PF00892 EamA-like transporter family 156 284 8.1E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_25515 81847dc54c545960077d97d4838edd88 298 Pfam PF00892 EamA-like transporter family 7 145 3.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_25515 81847dc54c545960077d97d4838edd88 298 SUPERFAMILY SSF103481 50 148 3.79E-6 T 11-10-2018 UP17_25515 81847dc54c545960077d97d4838edd88 298 SUPERFAMILY SSF103481 189 285 4.32E-12 T 11-10-2018 UP17_07230 b8d31024afce4df8d84cb9df38be9889 173 Pfam PF02620 Uncharacterized ACR, COG1399 56 166 3.1E-24 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD UP17_01525 ded8cda3e89d97a763a9aa2986a092bd 150 Pfam PF00583 Acetyltransferase (GNAT) family 17 125 1.0E-19 T 11-10-2018 IPR000182 GNAT domain UP17_01525 ded8cda3e89d97a763a9aa2986a092bd 150 Gene3D G3DSA:3.40.630.30 6 150 1.4E-45 T 11-10-2018 UP17_01525 ded8cda3e89d97a763a9aa2986a092bd 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 145 1.1E-45 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 UP17_01525 ded8cda3e89d97a763a9aa2986a092bd 150 SUPERFAMILY SSF55729 1 137 6.99E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_16730 b73ad8c409773cd0625565a2ebd9d6c5 147 Gene3D G3DSA:1.10.1510.10 1 90 1.1E-29 T 11-10-2018 UP17_16730 b73ad8c409773cd0625565a2ebd9d6c5 147 Pfam PF09424 Yqey-like protein 5 146 4.0E-55 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 UP17_16730 b73ad8c409773cd0625565a2ebd9d6c5 147 SUPERFAMILY SSF89095 1 146 1.15E-43 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 UP17_16730 b73ad8c409773cd0625565a2ebd9d6c5 147 Gene3D G3DSA:1.10.10.410 91 147 6.2E-27 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 SMART SM00271 4 61 2.8E-30 T 11-10-2018 IPR001623 DnaJ domain UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 SUPERFAMILY SSF57938 128 209 1.24E-18 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Gene3D G3DSA:2.60.260.20 111 247 1.9E-36 T 11-10-2018 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-10-2018 IPR018253 DnaJ domain, conserved site UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Pfam PF00684 DnaJ central domain 141 205 9.0E-14 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Gene3D G3DSA:1.10.287.110 1 106 6.0E-38 T 11-10-2018 IPR036869 Chaperone J-domain superfamily UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Gene3D G3DSA:2.10.230.10 141 205 1.9E-36 T 11-10-2018 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 SUPERFAMILY SSF49493 108 254 2.75E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 SUPERFAMILY SSF46565 1 100 3.27E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 SUPERFAMILY SSF49493 256 342 3.92E-26 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 PRINTS PR00625 DnaJ domain signature 41 61 6.1E-30 T 11-10-2018 IPR001623 DnaJ domain UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 PRINTS PR00625 DnaJ domain signature 25 40 6.1E-30 T 11-10-2018 IPR001623 DnaJ domain UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 PRINTS PR00625 DnaJ domain signature 7 25 6.1E-30 T 11-10-2018 IPR001623 DnaJ domain UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 PRINTS PR00625 DnaJ domain signature 61 80 6.1E-30 T 11-10-2018 IPR001623 DnaJ domain UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 367 41.38 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.1E-141 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Gene3D G3DSA:2.60.260.20 252 359 1.4E-30 T 11-10-2018 UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Pfam PF01556 DnaJ C terminal domain 114 331 4.5E-45 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal UP17_16765 892611adde2d402cf8676f29b83d4d0d 371 Pfam PF00226 DnaJ domain 5 66 8.1E-26 T 11-10-2018 IPR001623 DnaJ domain UP17_20290 c924ffe00442811513b65ae980209f49 216 Pfam PF08795 Putative papain-like cysteine peptidase (DUF1796) 13 171 1.8E-24 T 11-10-2018 IPR014903 Protein of unknown function DUF1796 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 Gene3D G3DSA:3.60.70.12 7 196 1.5E-67 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 37 410 2.0E-134 T 11-10-2018 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 15 410 2.3E-154 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 Pfam PF01960 ArgJ family 26 410 2.9E-145 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 SUPERFAMILY SSF56266 20 406 3.49E-134 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 Gene3D G3DSA:3.30.2330.10 197 281 3.4E-31 T 11-10-2018 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 Gene3D G3DSA:3.10.20.340 282 410 6.2E-47 T 11-10-2018 UP17_05865 c74adafa01b83c14a298b58b6e598bd2 410 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 410 139.629 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Pfam PF13193 AMP-binding enzyme C-terminal domain 874 945 3.1E-12 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Gene3D G3DSA:3.30.559.30 195 444 4.6E-43 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 479 890 9.9E-146 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 SUPERFAMILY SSF52777 1243 1488 4.22E-39 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 SUPERFAMILY SSF56801 414 984 2.09E-173 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 SUPERFAMILY SSF52777 188 426 1.22E-33 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 SUPERFAMILY SSF52777 10 182 1.78E-26 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Gene3D G3DSA:3.30.559.10 1041 1222 1.9E-58 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Gene3D G3DSA:3.30.559.10 2 194 2.8E-27 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Pfam PF00550 Phosphopantetheine attachment site 973 1034 8.9E-13 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 ProSitePatterns PS00012 Phosphopantetheine attachment site. 995 1010 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 SUPERFAMILY SSF47336 964 1035 2.09E-18 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Gene3D G3DSA:1.10.1200.10 958 1040 1.3E-23 T 11-10-2018 IPR036736 ACP-like superfamily UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Gene3D G3DSA:3.30.300.30 861 957 2.7E-36 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Gene3D G3DSA:3.40.50.12780 445 860 2.2E-150 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Pfam PF00501 AMP-binding enzyme 458 866 1.4E-112 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1364 1509 1.1E-31 T 11-10-2018 IPR010060 Non-ribosomal peptide synthase UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Pfam PF00668 Condensation domain 1051 1489 1.6E-87 T 11-10-2018 IPR001242 Condensation domain UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Pfam PF00668 Condensation domain 4 436 7.4E-88 T 11-10-2018 IPR001242 Condensation domain UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 Gene3D G3DSA:3.30.559.30 1223 1488 8.5E-70 T 11-10-2018 UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 ProSitePatterns PS00455 Putative AMP-binding domain signature. 601 612 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11010 0c8e9006d17d0a5f5a478ecdab7562a6 1520 SUPERFAMILY SSF52777 1047 1227 1.89E-38 T 11-10-2018 UP17_00740 122908b1b7b532148ebd5217e79b892c 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.744 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UP17_00740 122908b1b7b532148ebd5217e79b892c 122 SMART SM01374 1 122 6.9E-86 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UP17_00740 122908b1b7b532148ebd5217e79b892c 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.2E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 UP17_00740 122908b1b7b532148ebd5217e79b892c 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.6E-58 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 UP17_00740 122908b1b7b532148ebd5217e79b892c 122 SUPERFAMILY SSF50193 1 122 2.22E-50 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00740 122908b1b7b532148ebd5217e79b892c 122 Gene3D G3DSA:2.40.150.20 1 122 1.4E-53 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00740 122908b1b7b532148ebd5217e79b892c 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 182 223 3.4E-11 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 SMART SM00863 182 224 2.4E-12 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 Gene3D G3DSA:2.40.30.130 1 85 4.6E-23 T 11-10-2018 UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 SUPERFAMILY SSF50447 1 77 1.24E-15 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 SUPERFAMILY SSF55186 89 231 3.27E-36 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 Pfam PF01411 tRNA synthetases class II (A) 15 75 1.9E-7 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 Gene3D G3DSA:3.30.980.10 86 238 1.5E-45 T 11-10-2018 UP17_13625 9f87e096dcbe72aabcf5a3bc9811e17b 396 Gene3D G3DSA:3.10.310.40 291 395 6.1E-7 T 11-10-2018 UP17_02565 ebb890452089c514826ab0119729843a 498 Gene3D G3DSA:3.40.710.10 38 104 5.5E-6 T 11-10-2018 UP17_02565 ebb890452089c514826ab0119729843a 498 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 65 469 1.7E-121 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_02565 ebb890452089c514826ab0119729843a 498 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 37 489 1.7E-132 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_02565 ebb890452089c514826ab0119729843a 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 364 378 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_02565 ebb890452089c514826ab0119729843a 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 76 95 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_02565 ebb890452089c514826ab0119729843a 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 307 329 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_02565 ebb890452089c514826ab0119729843a 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 379 393 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_02565 ebb890452089c514826ab0119729843a 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 446 459 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 UP17_02565 ebb890452089c514826ab0119729843a 498 Gene3D G3DSA:3.40.710.10 279 490 1.7E-60 T 11-10-2018 UP17_02565 ebb890452089c514826ab0119729843a 498 SUPERFAMILY SSF56601 36 490 6.96E-93 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_02565 ebb890452089c514826ab0119729843a 498 Gene3D G3DSA:3.50.80.20 105 187 5.0E-20 T 11-10-2018 UP17_01000 2d5d2176d1fd5618d1e9e3e0d2a9b839 123 Gene3D G3DSA:1.10.10.810 1 115 1.4E-54 T 11-10-2018 UP17_01000 2d5d2176d1fd5618d1e9e3e0d2a9b839 123 SUPERFAMILY SSF159888 1 123 5.1E-41 T 11-10-2018 UP17_01000 2d5d2176d1fd5618d1e9e3e0d2a9b839 123 Pfam PF08818 Domain of unknown function (DU1801) 17 110 1.5E-12 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 UP17_13010 1ad9fcccf943857674ce4c11a3f30b3f 340 SUPERFAMILY SSF51679 14 335 5.06E-89 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 UP17_13010 1ad9fcccf943857674ce4c11a3f30b3f 340 Gene3D G3DSA:3.20.20.30 10 340 2.1E-103 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 UP17_13010 1ad9fcccf943857674ce4c11a3f30b3f 340 Pfam PF00296 Luciferase-like monooxygenase 30 311 5.2E-43 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 UP17_13010 1ad9fcccf943857674ce4c11a3f30b3f 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 15 335 4.3E-136 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 UP17_17515 9a4b73722397235435ad827d503cb287 96 PRINTS PR00063 Ribosomal protein L27 signature 37 61 1.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17515 9a4b73722397235435ad827d503cb287 96 PRINTS PR00063 Ribosomal protein L27 signature 12 36 1.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17515 9a4b73722397235435ad827d503cb287 96 PRINTS PR00063 Ribosomal protein L27 signature 62 86 1.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17515 9a4b73722397235435ad827d503cb287 96 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_17515 9a4b73722397235435ad827d503cb287 96 SUPERFAMILY SSF110324 10 91 2.76E-32 T 11-10-2018 UP17_17515 9a4b73722397235435ad827d503cb287 96 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.056 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17515 9a4b73722397235435ad827d503cb287 96 Pfam PF01016 Ribosomal L27 protein 10 89 8.3E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17515 9a4b73722397235435ad827d503cb287 96 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 1.6E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_17515 9a4b73722397235435ad827d503cb287 96 Gene3D G3DSA:2.40.50.100 28 93 1.3E-26 T 11-10-2018 UP17_17515 9a4b73722397235435ad827d503cb287 96 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 5.0E-17 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_06520 990166af26e548c9fcde820cfd7a52f8 587 SUPERFAMILY SSF53850 58 582 1.72E-109 T 11-10-2018 UP17_06520 990166af26e548c9fcde820cfd7a52f8 587 Gene3D G3DSA:3.10.105.10 319 554 1.1E-79 T 11-10-2018 UP17_06520 990166af26e548c9fcde820cfd7a52f8 587 Gene3D G3DSA:3.40.190.10 22 318 6.0E-49 T 11-10-2018 UP17_06520 990166af26e548c9fcde820cfd7a52f8 587 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 501 2.4E-80 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain UP17_06520 990166af26e548c9fcde820cfd7a52f8 587 PIRSF PIRSF002741 2 585 4.8E-86 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 UP17_06520 990166af26e548c9fcde820cfd7a52f8 587 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 113 135 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site UP17_12625 cb0e007f0aa81227381e06515a3d9080 447 Pfam PF02036 SCP-2 sterol transfer family 356 445 1.8E-11 T 11-10-2018 IPR003033 SCP2 sterol-binding domain UP17_12625 cb0e007f0aa81227381e06515a3d9080 447 Gene3D G3DSA:3.30.1050.10 336 447 2.1E-16 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily UP17_12625 cb0e007f0aa81227381e06515a3d9080 447 SUPERFAMILY SSF46548 153 306 4.03E-11 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_12625 cb0e007f0aa81227381e06515a3d9080 447 Gene3D G3DSA:3.30.70.20 189 325 1.7E-6 T 11-10-2018 UP17_12625 cb0e007f0aa81227381e06515a3d9080 447 Pfam PF00037 4Fe-4S binding domain 190 210 1.5E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_12625 cb0e007f0aa81227381e06515a3d9080 447 SUPERFAMILY SSF55718 341 446 5.18E-17 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily UP17_12625 cb0e007f0aa81227381e06515a3d9080 447 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 210 449 1.1E-62 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 Gene3D G3DSA:3.40.50.920 467 581 2.1E-28 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 174 3.9E-40 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 SUPERFAMILY SSF53323 1 221 1.44E-44 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 SUPERFAMILY SSF52518 196 458 1.68E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 477 571 4.9E-12 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 Gene3D G3DSA:3.40.920.10 1 184 3.0E-27 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 Gene3D G3DSA:3.40.50.970 185 386 1.5E-76 T 11-10-2018 UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 575 3.9E-213 T 11-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 UP17_08195 2ab726a34ae0c4709b3ce9d752e08e3f 585 SUPERFAMILY SSF52922 470 580 5.0E-23 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 PIRSF PIRSF020623 1 285 9.1E-106 T 11-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 1 282 2.2E-103 T 11-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 Gene3D G3DSA:1.20.58.1460 191 265 4.1E-5 T 11-10-2018 UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 Gene3D G3DSA:1.10.10.10 1 78 5.7E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 Gene3D G3DSA:3.30.70.2650 80 168 4.2E-6 T 11-10-2018 UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 SUPERFAMILY SSF46785 9 83 3.13E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 Pfam PF07848 PaaX-like protein 1 66 1.1E-28 T 11-10-2018 IPR012906 PaaX-like, N-terminal UP17_04960 18665c5ddaf66419fcab9dbe83e652e5 286 Pfam PF08223 PaaX-like protein C-terminal domain 161 260 3.6E-33 T 11-10-2018 IPR013225 PaaX-like, C-terminal UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 Gene3D G3DSA:3.40.50.2300 2 136 6.7E-12 T 11-10-2018 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 Pfam PF00072 Response regulator receiver domain 5 114 3.7E-6 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 SUPERFAMILY SSF46689 446 495 7.17E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 447 489 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 Pfam PF12833 Helix-turn-helix domain 417 495 4.4E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 462 477 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 477 493 1.6E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 SUPERFAMILY SSF46689 393 443 1.43E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 Gene3D G3DSA:1.10.10.60 443 497 1.6E-17 T 11-10-2018 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 Gene3D G3DSA:1.10.10.60 390 442 1.7E-14 T 11-10-2018 UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 SUPERFAMILY SSF52172 1 135 5.13E-14 T 11-10-2018 IPR011006 CheY-like superfamily UP17_03255 f844d91b1562ccdbbd0bd4d9a81f28a1 498 SMART SM00342 410 493 4.6E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 UP17_06315 d89b3a40a1170d6e9bb126d22cb84cb7 504 Gene3D G3DSA:3.40.50.1820 2 498 6.0E-147 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_06315 d89b3a40a1170d6e9bb126d22cb84cb7 504 Pfam PF00135 Carboxylesterase family 5 483 2.0E-112 T 11-10-2018 IPR002018 Carboxylesterase, type B UP17_06315 d89b3a40a1170d6e9bb126d22cb84cb7 504 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 180 195 - T 11-10-2018 IPR019826 Carboxylesterase type B, active site UP17_06315 d89b3a40a1170d6e9bb126d22cb84cb7 504 SUPERFAMILY SSF53474 5 480 3.11E-121 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_06315 d89b3a40a1170d6e9bb126d22cb84cb7 504 PRINTS PR00878 Cholinesterase signature 410 422 6.3E-7 T 11-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 UP17_06315 d89b3a40a1170d6e9bb126d22cb84cb7 504 PRINTS PR00878 Cholinesterase signature 105 134 6.3E-7 T 11-10-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 UP17_06315 d89b3a40a1170d6e9bb126d22cb84cb7 504 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 81 91 - T 11-10-2018 IPR019819 Carboxylesterase type B, conserved site UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 SMART SM00893 5 190 4.7E-45 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 Gene3D G3DSA:3.40.50.1220 195 325 8.5E-57 T 11-10-2018 UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 Pfam PF01012 Electron transfer flavoprotein domain 6 179 9.6E-45 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 SUPERFAMILY SSF52467 198 317 3.27E-48 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 4.8E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 PIRSF PIRSF000089 1 323 1.2E-112 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 SUPERFAMILY SSF52402 4 190 1.4E-49 T 11-10-2018 UP17_17890 1d820bbcbcdc8ae95326d694d32e5851 325 Gene3D G3DSA:3.40.50.620 2 194 2.4E-53 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 Gene3D G3DSA:3.40.309.10 290 480 1.2E-188 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 SUPERFAMILY SSF53720 4 511 2.23E-155 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 69.717 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 Gene3D G3DSA:3.40.605.10 10 504 1.2E-188 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 514 7.3E-252 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 UP17_19115 3e59998a0b1f08edff0d98957df9fb09 515 Pfam PF00171 Aldehyde dehydrogenase family 50 509 8.7E-155 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_06645 1119db432967f64a9f25ecc2a62195f2 520 Gene3D G3DSA:3.40.309.10 243 435 6.3E-147 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_06645 1119db432967f64a9f25ecc2a62195f2 520 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 236 243 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_06645 1119db432967f64a9f25ecc2a62195f2 520 Pfam PF00171 Aldehyde dehydrogenase family 6 462 7.5E-137 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_06645 1119db432967f64a9f25ecc2a62195f2 520 Gene3D G3DSA:3.40.605.10 8 463 6.3E-147 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_06645 1119db432967f64a9f25ecc2a62195f2 520 SUPERFAMILY SSF53720 7 465 4.19E-141 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_06645 1119db432967f64a9f25ecc2a62195f2 520 PIRSF PIRSF036492 15 507 3.7E-120 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 SUPERFAMILY SSF53738 3 180 5.49E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Gene3D G3DSA:3.30.310.50 370 448 9.3E-29 T 11-10-2018 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 2.0E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 2.0E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 2.0E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 2.9E-14 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Gene3D G3DSA:3.40.120.10 174 362 1.7E-72 T 11-10-2018 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Gene3D G3DSA:3.40.120.10 256 339 1.7E-72 T 11-10-2018 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 SUPERFAMILY SSF55957 357 446 8.5E-27 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 SUPERFAMILY SSF53738 257 365 2.9E-34 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 SUPERFAMILY SSF53738 158 256 2.12E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 7.7E-18 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 132 6.1E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 369 2.7E-37 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Gene3D G3DSA:3.40.120.10 3 155 2.8E-56 T 11-10-2018 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.139 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_00990 5a247b08c48dc537ab4557b8243ac8d4 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 5.3E-185 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_02625 2733b6b48b3ff705b13bb905fbcfdb46 391 Gene3D G3DSA:3.40.640.10 4 257 1.9E-92 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_02625 2733b6b48b3ff705b13bb905fbcfdb46 391 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 391 1.4E-143 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_02625 2733b6b48b3ff705b13bb905fbcfdb46 391 PIRSF PIRSF001434 1 391 1.6E-145 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_02625 2733b6b48b3ff705b13bb905fbcfdb46 391 SUPERFAMILY SSF53383 26 391 1.73E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_02625 2733b6b48b3ff705b13bb905fbcfdb46 391 Gene3D G3DSA:3.90.1150.10 261 391 4.7E-52 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_02625 2733b6b48b3ff705b13bb905fbcfdb46 391 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_02625 2733b6b48b3ff705b13bb905fbcfdb46 391 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 7 390 1.6E-183 T 11-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.5E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.5E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 6.3E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 SUPERFAMILY SSF64288 62 239 2.2E-39 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 SUPERFAMILY SSF46785 6 83 7.09E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 SMART SM00866 95 233 1.2E-22 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 Gene3D G3DSA:3.40.1410.10 78 239 1.3E-32 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 Gene3D G3DSA:1.10.10.10 2 77 1.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 SMART SM00345 14 73 2.0E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_08100 88a32f7464bd949d2baf8c6e4c38d6e8 241 Pfam PF07702 UTRA domain 96 232 3.3E-29 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 PIRSF PIRSF000729 4 365 8.1E-132 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 SUPERFAMILY SSF53633 9 261 6.15E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_12420 f86647f85248807d1777a9b10f8fd013 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 351 3.5E-119 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 Pfam PF00696 Amino acid kinase family 9 236 1.5E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 Pfam PF01472 PUA domain 283 344 9.4E-10 T 11-10-2018 IPR002478 PUA domain GO:0003723 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 Gene3D G3DSA:2.30.130.10 272 360 3.7E-16 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 SUPERFAMILY SSF88697 283 342 4.59E-10 T 11-10-2018 IPR015947 PUA-like superfamily UP17_12420 f86647f85248807d1777a9b10f8fd013 371 Gene3D G3DSA:3.40.1160.10 3 267 1.2E-86 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_12420 f86647f85248807d1777a9b10f8fd013 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 263 37.651 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 3.3E-52 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 3.3E-52 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 3.3E-52 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 3.3E-52 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 3.3E-52 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 SMART SM00359 283 361 1.2E-4 T 11-10-2018 IPR002478 PUA domain GO:0003723 UP17_12420 f86647f85248807d1777a9b10f8fd013 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_14575 adc008cd992e7e33502c80503d1b9be2 541 Gene3D G3DSA:3.10.310.70 80 200 4.9E-149 T 11-10-2018 UP17_14575 adc008cd992e7e33502c80503d1b9be2 541 SUPERFAMILY SSF51556 61 491 1.05E-36 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_14575 adc008cd992e7e33502c80503d1b9be2 541 SUPERFAMILY SSF51338 2 531 2.31E-24 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_14575 adc008cd992e7e33502c80503d1b9be2 541 Gene3D G3DSA:2.30.40.10 8 506 4.9E-149 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_14575 adc008cd992e7e33502c80503d1b9be2 541 Pfam PF07969 Amidohydrolase family 51 531 1.7E-101 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_14575 adc008cd992e7e33502c80503d1b9be2 541 Gene3D G3DSA:3.20.20.140 62 490 4.9E-149 T 11-10-2018 UP17_22390 79e2a4e0d0310191f9d69c7b9ea586df 489 Gene3D G3DSA:1.20.1730.10 21 488 1.4E-100 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_22390 79e2a4e0d0310191f9d69c7b9ea586df 489 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 413 433 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_22390 79e2a4e0d0310191f9d69c7b9ea586df 489 Pfam PF00474 Sodium:solute symporter family 33 431 2.5E-107 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_22390 79e2a4e0d0310191f9d69c7b9ea586df 489 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_22390 79e2a4e0d0310191f9d69c7b9ea586df 489 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 485 4.8E-221 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 UP17_22390 79e2a4e0d0310191f9d69c7b9ea586df 489 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 431 1.6E-99 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_14930 9143b43299f91750e14538a1363d8778 448 PIRSF PIRSF006060 1 447 1.9E-78 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_14930 9143b43299f91750e14538a1363d8778 448 Pfam PF00324 Amino acid permease 16 408 1.0E-41 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_14930 9143b43299f91750e14538a1363d8778 448 Gene3D G3DSA:1.20.1740.10 6 443 2.5E-74 T 11-10-2018 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 9.4E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 Gene3D G3DSA:1.20.150.20 372 499 1.0E-50 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 SUPERFAMILY SSF47917 372 500 8.37E-47 T 11-10-2018 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 PIRSF PIRSF039088 1 501 3.5E-243 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 50.986 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.9E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 Gene3D G3DSA:2.40.30.20 1 93 5.0E-36 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 SUPERFAMILY SSF50615 10 94 8.37E-30 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 493 1.9E-45 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 3.2E-254 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 Gene3D G3DSA:3.40.50.300 94 371 1.8E-125 T 11-10-2018 UP17_24155 5b8695ac9345e3a07c4bd9a9bae44f10 502 SUPERFAMILY SSF52540 95 370 5.58E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07090 7de565b71b53b640b1dfa16f3aec10f5 443 Gene3D G3DSA:3.40.50.1010 1 151 1.2E-22 T 11-10-2018 UP17_07090 7de565b71b53b640b1dfa16f3aec10f5 443 Gene3D G3DSA:3.40.50.300 232 442 5.0E-69 T 11-10-2018 UP17_07090 7de565b71b53b640b1dfa16f3aec10f5 443 SUPERFAMILY SSF52540 24 421 5.31E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07090 7de565b71b53b640b1dfa16f3aec10f5 443 Pfam PF13638 PIN domain 6 148 1.5E-33 T 11-10-2018 IPR002716 PIN domain UP17_07090 7de565b71b53b640b1dfa16f3aec10f5 443 SMART SM00670 4 136 9.8E-25 T 11-10-2018 IPR002716 PIN domain UP17_07090 7de565b71b53b640b1dfa16f3aec10f5 443 Pfam PF02562 PhoH-like protein 234 436 1.8E-54 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 Gene3D G3DSA:3.40.50.300 9 183 4.0E-65 T 11-10-2018 UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 1.7E-69 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 Pfam PF00625 Guanylate kinase 7 183 5.2E-51 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 Gene3D G3DSA:3.30.63.10 37 96 4.0E-65 T 11-10-2018 UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 SMART SM00072 4 187 2.1E-72 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 SUPERFAMILY SSF52540 4 193 4.37E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07490 9ba17d976d391c70b047222c02eb36fd 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 35.735 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 UP17_02935 5d09a53ada9ff5193b0d670051b49126 419 SUPERFAMILY SSF103473 20 416 1.44E-52 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_02935 5d09a53ada9ff5193b0d670051b49126 419 Gene3D G3DSA:1.20.1250.20 28 408 5.6E-43 T 11-10-2018 UP17_02935 5d09a53ada9ff5193b0d670051b49126 419 Pfam PF07690 Major Facilitator Superfamily 38 256 6.8E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_17510 55d10eb296a2b4770050cd1e402b2ca0 181 Gene3D G3DSA:1.10.287.130 1 57 8.4E-22 T 11-10-2018 UP17_17510 55d10eb296a2b4770050cd1e402b2ca0 181 Gene3D G3DSA:3.30.565.30 58 178 2.8E-17 T 11-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily UP17_17510 55d10eb296a2b4770050cd1e402b2ca0 181 SUPERFAMILY SSF55890 1 169 7.19E-35 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 UP17_17510 55d10eb296a2b4770050cd1e402b2ca0 181 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 6 57 7.1E-18 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain UP17_17510 55d10eb296a2b4770050cd1e402b2ca0 181 SMART SM01317 59 175 8.7E-4 T 11-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal UP17_17510 55d10eb296a2b4770050cd1e402b2ca0 181 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 60 173 3.0E-17 T 11-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal UP17_02260 4081c69feea70f4a7f87679a3113e78d 225 Gene3D G3DSA:3.40.50.300 5 225 3.7E-67 T 11-10-2018 UP17_02260 4081c69feea70f4a7f87679a3113e78d 225 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_02260 4081c69feea70f4a7f87679a3113e78d 225 SMART SM00382 34 221 1.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_02260 4081c69feea70f4a7f87679a3113e78d 225 Pfam PF00005 ABC transporter 25 174 3.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_02260 4081c69feea70f4a7f87679a3113e78d 225 SUPERFAMILY SSF52540 8 224 2.78E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 SUPERFAMILY SSF56808 6 226 9.55E-85 T 11-10-2018 IPR023674 Ribosomal protein L1-like UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 Gene3D G3DSA:3.40.50.790 68 159 2.2E-85 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 PIRSF PIRSF002155 1 227 1.8E-82 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 Gene3D G3DSA:3.30.190.20 21 225 2.2E-85 T 11-10-2018 UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.873 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 3.4E-57 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 5.2E-107 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 UP17_00630 9d4f13ad8e3fdc51b5b850536e657515 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 566 9.8E-223 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 863 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 SUPERFAMILY SSF46589 816 880 6.54E-17 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Gene3D G3DSA:3.90.740.10 181 347 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Gene3D G3DSA:3.40.50.620 28 528 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 816 881 7.3E-24 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Gene3D G3DSA:1.10.730.10 8 744 0.0 T 11-10-2018 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 SUPERFAMILY SSF50677 197 347 4.84E-65 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 SUPERFAMILY SSF47323 579 831 1.21E-77 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 SUPERFAMILY SSF52374 6 577 4.51E-143 T 11-10-2018 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Pfam PF08264 Anticodon-binding domain of tRNA 610 755 1.2E-42 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Gene3D G3DSA:1.10.287.380 809 881 1.0E-23 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 881 16.237 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 PRINTS PR00986 Valyl-tRNA synthetase signature 447 468 1.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 1.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 1.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 UP17_17625 fd6a0a5ebdf94886fac2f81d851a5143 883 PRINTS PR00986 Valyl-tRNA synthetase signature 479 497 1.4E-38 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 UP17_24830 660c808e16d7c8856465085dd7cdafdf 503 SUPERFAMILY SSF53383 47 494 1.24E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_24830 660c808e16d7c8856465085dd7cdafdf 503 Gene3D G3DSA:3.40.640.10 121 373 2.5E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_24830 660c808e16d7c8856465085dd7cdafdf 503 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 68 430 2.3E-64 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 UP17_24830 660c808e16d7c8856465085dd7cdafdf 503 Gene3D G3DSA:3.90.1150.170 67 492 2.5E-138 T 11-10-2018 UP17_08610 48753561792a6eecb1dc87cc77cb9e0f 257 Pfam PF05857 TraX protein 3 253 1.1E-35 T 11-10-2018 IPR008875 TraX UP17_13500 c8b27a67b9d6cea3719bc27dee0c13bd 312 Gene3D G3DSA:1.20.58.340 256 312 5.1E-12 T 11-10-2018 UP17_13500 c8b27a67b9d6cea3719bc27dee0c13bd 312 Pfam PF01544 CorA-like Mg2+ transporter protein 23 307 8.3E-66 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 UP17_13500 c8b27a67b9d6cea3719bc27dee0c13bd 312 SUPERFAMILY SSF143865 1 247 1.83E-54 T 11-10-2018 UP17_13500 c8b27a67b9d6cea3719bc27dee0c13bd 312 SUPERFAMILY SSF144083 248 310 1.96E-15 T 11-10-2018 UP17_13500 c8b27a67b9d6cea3719bc27dee0c13bd 312 Gene3D G3DSA:1.20.58.340 134 254 2.6E-28 T 11-10-2018 UP17_13500 c8b27a67b9d6cea3719bc27dee0c13bd 312 Gene3D G3DSA:3.30.460.20 2 133 1.2E-25 T 11-10-2018 UP17_06850 2d711b025b06f00a5ca72b9b4b21d794 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 119 17.113 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UP17_06850 2d711b025b06f00a5ca72b9b4b21d794 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 114 2.6E-21 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 UP17_08285 840698fd787a00ca4a4ac5115a834feb 449 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 436 5.8E-110 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 UP17_08285 840698fd787a00ca4a4ac5115a834feb 449 PIRSF PIRSF006351 1 446 1.3E-121 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 UP17_08285 840698fd787a00ca4a4ac5115a834feb 449 Pfam PF02378 Phosphotransferase system, EIIC 26 364 2.3E-48 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_19185 d861918125642db911e9deef6c90d29a 526 SMART SM00387 417 526 8.8E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_19185 d861918125642db911e9deef6c90d29a 526 SUPERFAMILY SSF103190 37 168 1.06E-37 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_19185 d861918125642db911e9deef6c90d29a 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 484 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_19185 d861918125642db911e9deef6c90d29a 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 470 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_19185 d861918125642db911e9deef6c90d29a 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_19185 d861918125642db911e9deef6c90d29a 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 510 523 1.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_19185 d861918125642db911e9deef6c90d29a 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 421 525 3.7E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_19185 d861918125642db911e9deef6c90d29a 526 Gene3D G3DSA:3.30.450.20 199 312 5.2E-23 T 11-10-2018 UP17_19185 d861918125642db911e9deef6c90d29a 526 SUPERFAMILY SSF55874 411 523 5.5E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_19185 d861918125642db911e9deef6c90d29a 526 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 323 371 1.3E-9 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain UP17_19185 d861918125642db911e9deef6c90d29a 526 SUPERFAMILY SSF55890 328 374 1.83E-10 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 UP17_19185 d861918125642db911e9deef6c90d29a 526 Gene3D G3DSA:3.30.565.10 371 523 9.0E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_19185 d861918125642db911e9deef6c90d29a 526 SUPERFAMILY SSF55785 217 310 1.21E-6 T 11-10-2018 IPR035965 PAS domain superfamily UP17_19185 d861918125642db911e9deef6c90d29a 526 Pfam PF17203 Single cache domain 3 36 167 3.5E-24 T 11-10-2018 IPR033463 Single cache domain 3 UP17_19185 d861918125642db911e9deef6c90d29a 526 Gene3D G3DSA:3.30.450.20 31 164 5.8E-44 T 11-10-2018 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 Pfam PF00696 Amino acid kinase family 4 233 1.2E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 Pfam PF01472 PUA domain 277 345 5.2E-16 T 11-10-2018 IPR002478 PUA domain GO:0003723 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 SUPERFAMILY SSF53633 4 255 4.58E-68 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 SUPERFAMILY SSF88697 277 360 7.18E-16 T 11-10-2018 IPR015947 PUA-like superfamily UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 PIRSF PIRSF000729 1 361 2.1E-129 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 Gene3D G3DSA:3.40.1160.10 1 258 3.2E-82 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 360 6.6E-133 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 265 36.14 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 SMART SM00359 277 355 2.3E-13 T 11-10-2018 IPR002478 PUA domain GO:0003723 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 Gene3D G3DSA:2.30.130.10 266 361 3.6E-23 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 3.3E-49 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 3.3E-49 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 3.3E-49 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 3.3E-49 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_14995 02420fe940ee32b1cdda5c0f8a7be795 362 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 3.3E-49 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 243 1.9E-80 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 Pfam PF02565 Recombination protein O C terminal 82 237 6.3E-44 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 Pfam PF11967 Recombination protein O N terminal 1 77 3.1E-22 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 Gene3D G3DSA:2.40.50.140 1 81 4.0E-13 T 11-10-2018 UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 SUPERFAMILY SSF50249 1 77 1.4E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 30.015 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 Gene3D G3DSA:3.30.60.100 146 185 4.5E-20 T 11-10-2018 UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 Gene3D G3DSA:1.20.1440.120 88 225 4.5E-20 T 11-10-2018 UP17_16670 78e1bbcf48019d38e771abe9d47ea6e6 250 SUPERFAMILY SSF57863 81 232 1.18E-48 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger UP17_08050 15d8514487074f9224cfb415641547ad 300 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 4 288 6.5E-136 T 11-10-2018 IPR014215 Dipicolinic acid synthetase subunit A UP17_08050 15d8514487074f9224cfb415641547ad 300 SUPERFAMILY SSF51735 130 262 5.18E-18 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_08050 15d8514487074f9224cfb415641547ad 300 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 122 3.9E-29 T 11-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal UP17_08050 15d8514487074f9224cfb415641547ad 300 Gene3D G3DSA:3.40.50.720 126 272 2.5E-105 T 11-10-2018 UP17_08050 15d8514487074f9224cfb415641547ad 300 Gene3D G3DSA:3.40.50.720 7 284 2.5E-105 T 11-10-2018 UP17_08050 15d8514487074f9224cfb415641547ad 300 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 151 288 2.3E-8 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain UP17_17410 1037dc9f12dc64a6f0c3aa45ba462d30 219 Pfam PF04239 Protein of unknown function (DUF421) 89 193 1.2E-35 T 11-10-2018 IPR007353 Protein of unknown function DUF421 UP17_17410 1037dc9f12dc64a6f0c3aa45ba462d30 219 Gene3D G3DSA:3.30.240.20 81 154 1.1E-24 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_17410 1037dc9f12dc64a6f0c3aa45ba462d30 219 Gene3D G3DSA:3.30.240.20 160 218 1.4E-13 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_15350 7f949614116ddbd6e6ff8c8aa6b66ad6 183 Pfam PF08858 IDEAL domain 140 176 4.4E-12 T 11-10-2018 IPR014957 IDEAL domain UP17_15350 7f949614116ddbd6e6ff8c8aa6b66ad6 183 Hamap MF_00760 UPF0302 protein . 3 179 33.074 T 11-10-2018 IPR011188 Uncharacterised protein family UPF0302 UP17_15350 7f949614116ddbd6e6ff8c8aa6b66ad6 183 Gene3D G3DSA:1.20.1440.290 1 124 2.0E-56 T 11-10-2018 IPR038091 UPF0302, N-terminal domain superfamily UP17_15350 7f949614116ddbd6e6ff8c8aa6b66ad6 183 Gene3D G3DSA:4.10.810.10 125 181 1.3E-19 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 UP17_15350 7f949614116ddbd6e6ff8c8aa6b66ad6 183 SMART SM00914 140 176 1.5E-8 T 11-10-2018 IPR014957 IDEAL domain UP17_15350 7f949614116ddbd6e6ff8c8aa6b66ad6 183 Pfam PF08864 UPF0302 domain 10 113 1.8E-48 T 11-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal UP17_15350 7f949614116ddbd6e6ff8c8aa6b66ad6 183 PIRSF PIRSF007165 2 182 1.7E-81 T 11-10-2018 IPR011188 Uncharacterised protein family UPF0302 UP17_24495 77c9411d6c46cf53226dcae30c1a1f29 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_24495 77c9411d6c46cf53226dcae30c1a1f29 401 Gene3D G3DSA:1.20.1250.20 7 380 1.2E-58 T 11-10-2018 UP17_24495 77c9411d6c46cf53226dcae30c1a1f29 401 SUPERFAMILY SSF103473 1 387 3.66E-66 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_24495 77c9411d6c46cf53226dcae30c1a1f29 401 Pfam PF07690 Major Facilitator Superfamily 17 341 2.3E-48 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 SUPERFAMILY SSF46689 3 85 5.08E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 Gene3D G3DSA:1.10.357.10 2 196 2.8E-54 T 11-10-2018 UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 5.9E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 SUPERFAMILY SSF48498 81 193 9.35E-24 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 8.6E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 8.6E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_12630 196846fbff6d61e57be7fff5d9aa3f0a 198 Pfam PF16925 Bacterial transcriptional repressor C-terminal 83 189 1.9E-7 T 11-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal UP17_04045 eec5ab2700f4f251615d81618a9d93e3 190 Pfam PF00589 Phage integrase family 30 169 4.2E-22 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_04045 eec5ab2700f4f251615d81618a9d93e3 190 Gene3D G3DSA:1.10.443.10 12 188 2.6E-28 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_04045 eec5ab2700f4f251615d81618a9d93e3 190 SUPERFAMILY SSF56349 6 175 4.12E-33 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_10605 ff1a0d6a8ef7472163d27ebec60bfff0 67 SUPERFAMILY SSF54285 3 66 2.76E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp UP17_10605 ff1a0d6a8ef7472163d27ebec60bfff0 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 2.1E-19 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis UP17_10605 ff1a0d6a8ef7472163d27ebec60bfff0 67 Pfam PF02597 ThiS family 7 67 8.9E-13 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 UP17_10605 ff1a0d6a8ef7472163d27ebec60bfff0 67 Gene3D G3DSA:3.10.20.30 3 67 4.5E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_02865 48473e321fcef12d6c3c3dfca6c2f79e 98 TIGRFAM TIGR04104 cxxc_20_cxxc: cxxc_20_cxxc protein 2 93 1.3E-23 T 11-10-2018 IPR026369 CxxC-20-CxxC protein UP17_13140 1c9edad35c29160b311391e91a43223a 204 SUPERFAMILY SSF55811 27 196 1.15E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_13140 1c9edad35c29160b311391e91a43223a 204 Gene3D G3DSA:3.90.79.10 1 202 9.4E-47 T 11-10-2018 UP17_13140 1c9edad35c29160b311391e91a43223a 204 Pfam PF00293 NUDIX domain 27 134 9.4E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_25835 a3b9e4d0d241d11ceef5376e67d8c07d 279 SUPERFAMILY SSF56349 3 274 1.18E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_25835 a3b9e4d0d241d11ceef5376e67d8c07d 279 Gene3D G3DSA:1.10.443.10 102 278 2.9E-50 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_25835 a3b9e4d0d241d11ceef5376e67d8c07d 279 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 14 84 1.6E-6 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 UP17_25835 a3b9e4d0d241d11ceef5376e67d8c07d 279 Pfam PF00589 Phage integrase family 106 264 1.5E-39 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_25835 a3b9e4d0d241d11ceef5376e67d8c07d 279 Gene3D G3DSA:1.10.150.130 3 101 2.6E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_12550 41627e8cf72d8b696c8cf34314c9e04a 507 SUPERFAMILY SSF53720 7 490 1.28E-140 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_12550 41627e8cf72d8b696c8cf34314c9e04a 507 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 12 489 8.3E-185 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 UP17_12550 41627e8cf72d8b696c8cf34314c9e04a 507 Pfam PF00171 Aldehyde dehydrogenase family 25 485 5.2E-132 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_12550 41627e8cf72d8b696c8cf34314c9e04a 507 Gene3D G3DSA:3.40.605.10 30 466 3.6E-144 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_12550 41627e8cf72d8b696c8cf34314c9e04a 507 Gene3D G3DSA:3.40.309.10 256 458 3.6E-144 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_23770 17945860c11a943a0db5383f636d934a 162 Gene3D G3DSA:1.20.58.300 2 135 6.1E-7 T 11-10-2018 UP17_23770 17945860c11a943a0db5383f636d934a 162 SUPERFAMILY SSF140566 2 135 2.62E-14 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 UP17_23770 17945860c11a943a0db5383f636d934a 162 Pfam PF05130 FlgN protein 1 146 1.1E-21 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 SMART SM00448 3 114 5.7E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 SMART SM00862 152 227 2.2E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 SUPERFAMILY SSF52172 2 126 2.56E-38 T 11-10-2018 IPR011006 CheY-like superfamily UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 Pfam PF00072 Response regulator receiver domain 5 115 2.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 SUPERFAMILY SSF46894 129 228 2.66E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 4.6E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 Gene3D G3DSA:1.10.10.10 130 231 2.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_23330 15f1d137772b7bd981b0288b1ef7ceeb 231 Gene3D G3DSA:3.40.50.2300 1 122 7.1E-38 T 11-10-2018 UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 SMART SM00418 35 114 8.5E-27 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 85 100 8.4E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 8.4E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 68 8.4E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 8.4E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 Gene3D G3DSA:1.10.10.10 3 123 3.9E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 SUPERFAMILY SSF46785 19 115 6.56E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 59 77 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 UP17_01050 98f7b16d4fb17ce300d06ebfc248d6d7 123 Pfam PF01022 Bacterial regulatory protein, arsR family 42 88 7.3E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_09475 92eda4d009b39cce1f7fa442dc449eb0 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 129 8.6E-14 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 UP17_09475 92eda4d009b39cce1f7fa442dc449eb0 138 Pfam PF03061 Thioesterase superfamily 53 128 5.4E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_09475 92eda4d009b39cce1f7fa442dc449eb0 138 SUPERFAMILY SSF54637 24 137 1.35E-22 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_09475 92eda4d009b39cce1f7fa442dc449eb0 138 Gene3D G3DSA:3.10.129.10 7 138 2.2E-23 T 11-10-2018 UP17_20285 4071d3397fdcd4cc233f6fac545c5980 263 ProSitePatterns PS00337 Beta-lactamase class-D active site. 70 80 - T 11-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 UP17_20285 4071d3397fdcd4cc233f6fac545c5980 263 Gene3D G3DSA:3.40.710.10 27 263 2.4E-93 T 11-10-2018 UP17_20285 4071d3397fdcd4cc233f6fac545c5980 263 SUPERFAMILY SSF56601 37 255 1.94E-32 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_20285 4071d3397fdcd4cc233f6fac545c5980 263 Pfam PF00905 Penicillin binding protein transpeptidase domain 48 246 2.8E-34 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 Pfam PF00704 Glycosyl hydrolases family 18 152 408 1.3E-26 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 Gene3D G3DSA:3.10.50.10 323 381 4.8E-104 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 SMART SM00257 52 96 7.0E-11 T 11-10-2018 IPR018392 LysM domain UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 SMART SM00257 3 47 4.0E-13 T 11-10-2018 IPR018392 LysM domain UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 SUPERFAMILY SSF54106 52 96 5.36E-10 T 11-10-2018 UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 Pfam PF01476 LysM domain 53 96 2.1E-9 T 11-10-2018 IPR018392 LysM domain UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 Pfam PF01476 LysM domain 4 47 1.8E-11 T 11-10-2018 IPR018392 LysM domain UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 SMART SM00636 103 410 1.0E-26 T 11-10-2018 IPR011583 Chitinase II GO:0008061 UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 Gene3D G3DSA:3.10.350.10 2 50 1.0E-13 T 11-10-2018 IPR036779 LysM domain superfamily UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 Gene3D G3DSA:3.10.350.10 51 106 1.1E-12 T 11-10-2018 IPR036779 LysM domain superfamily UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 Gene3D G3DSA:3.20.20.80 130 415 4.8E-104 T 11-10-2018 UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 SUPERFAMILY SSF51445 127 420 1.76E-45 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_22760 71d7ff11eb89778878cc083c0d9307c5 428 SUPERFAMILY SSF54106 2 47 7.32E-11 T 11-10-2018 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 ProSitePatterns PS00506 Beta-amylase active site 1. 106 114 - T 11-10-2018 IPR018238 Glycoside hydrolase, family 14, conserved site GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 SMART SM01065 444 536 1.4E-18 T 11-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 ProSitePatterns PS00679 Beta-amylase active site 2. 184 194 - T 11-10-2018 IPR018238 Glycoside hydrolase, family 14, conserved site GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 Pfam PF01373 Glycosyl hydrolase family 14 34 432 1.3E-162 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 SUPERFAMILY SSF49452 442 538 6.62E-18 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 Pfam PF00686 Starch binding domain 445 533 1.1E-16 T 11-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00841 Bacterial beta-amylase signature 125 144 8.9E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00841 Bacterial beta-amylase signature 221 236 8.9E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00841 Bacterial beta-amylase signature 237 254 8.9E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00841 Bacterial beta-amylase signature 407 428 8.9E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 59 73 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 80 98 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 331 354 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 369 391 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 184 206 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 319 330 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 263 282 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 102 123 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 300 316 5.2E-62 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 Gene3D G3DSA:2.60.40.10 446 538 2.3E-17 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 SUPERFAMILY SSF51445 28 476 2.11E-123 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_12125 a0883669f195cfe7d3cb23dec6a3900d 538 Gene3D G3DSA:3.20.20.80 26 445 2.1E-150 T 11-10-2018 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SUPERFAMILY SSF55785 319 425 2.27E-7 T 11-10-2018 IPR035965 PAS domain superfamily UP17_12090 991e22cf061965efec859ba6fc9784c8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 638 651 2.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 613 2.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 599 2.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 632 2.3E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 245 4.4E-40 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SMART SM00387 545 654 3.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Gene3D G3DSA:3.30.450.20 301 426 8.0E-10 T 11-10-2018 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Gene3D G3DSA:3.40.190.10 33 244 4.6E-41 T 11-10-2018 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 548 653 3.9E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Pfam PF00512 His Kinase A (phospho-acceptor) domain 439 501 3.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SUPERFAMILY SSF55874 496 652 1.15E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Gene3D G3DSA:1.10.287.130 427 503 3.1E-20 T 11-10-2018 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SMART SM00091 314 380 0.0037 T 11-10-2018 IPR000014 PAS domain UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Gene3D G3DSA:3.40.190.10 112 206 4.6E-41 T 11-10-2018 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SMART SM00388 439 505 7.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SUPERFAMILY SSF53850 34 246 1.86E-42 T 11-10-2018 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 Gene3D G3DSA:3.30.565.10 513 654 2.3E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SUPERFAMILY SSF47384 434 503 1.06E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_12090 991e22cf061965efec859ba6fc9784c8 655 SMART SM00062 27 247 4.4E-37 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_15995 544e6eb370869276727bc5b266290931 428 Pfam PF02817 e3 binding domain 119 153 2.0E-12 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 UP17_15995 544e6eb370869276727bc5b266290931 428 SUPERFAMILY SSF52777 188 420 3.25E-83 T 11-10-2018 UP17_15995 544e6eb370869276727bc5b266290931 428 Pfam PF00364 Biotin-requiring enzyme 6 77 1.2E-22 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_15995 544e6eb370869276727bc5b266290931 428 SUPERFAMILY SSF47005 112 157 2.22E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_15995 544e6eb370869276727bc5b266290931 428 Gene3D G3DSA:4.10.320.10 110 167 5.4E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_15995 544e6eb370869276727bc5b266290931 428 SUPERFAMILY SSF51230 3 86 3.14E-25 T 11-10-2018 IPR011053 Single hybrid motif UP17_15995 544e6eb370869276727bc5b266290931 428 Gene3D G3DSA:3.30.559.10 182 428 1.6E-100 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_15995 544e6eb370869276727bc5b266290931 428 Gene3D G3DSA:2.40.50.100 2 100 1.6E-25 T 11-10-2018 UP17_15995 544e6eb370869276727bc5b266290931 428 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 UP17_15995 544e6eb370869276727bc5b266290931 428 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 198 421 1.1E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 UP17_21235 e3203ac7547378dc04a322f20382966b 738 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 7 169 5.6E-57 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal UP17_21235 e3203ac7547378dc04a322f20382966b 738 Gene3D G3DSA:1.10.287.950 140 281 5.5E-6 T 11-10-2018 UP17_21235 e3203ac7547378dc04a322f20382966b 738 Pfam PF12698 ABC-2 family transporter protein 20 178 1.2E-14 T 11-10-2018 UP17_21235 e3203ac7547378dc04a322f20382966b 738 Pfam PF12698 ABC-2 family transporter protein 360 719 1.4E-15 T 11-10-2018 UP17_21235 e3203ac7547378dc04a322f20382966b 738 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 525 725 5.1E-59 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal UP17_23130 680801ce208cd264f9820326265a1fd6 142 SUPERFAMILY SSF82649 2 141 5.23E-52 T 11-10-2018 UP17_23130 680801ce208cd264f9820326265a1fd6 142 Gene3D G3DSA:3.90.1010.10 2 142 1.5E-59 T 11-10-2018 UP17_23130 680801ce208cd264f9820326265a1fd6 142 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 140 1.3E-58 T 11-10-2018 UP17_23130 680801ce208cd264f9820326265a1fd6 142 Pfam PF01592 NifU-like N terminal domain 10 128 6.3E-35 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 6.5E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 6.5E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 6.5E-8 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 Gene3D G3DSA:3.40.250.10 108 216 9.5E-23 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 SMART SM00418 17 91 1.0E-19 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 Pfam PF00581 Rhodanese-like domain 123 213 1.7E-14 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 Gene3D G3DSA:1.10.10.10 3 107 5.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 SUPERFAMILY SSF46785 7 95 1.22E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 SUPERFAMILY SSF52821 112 215 9.5E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 Pfam PF01022 Bacterial regulatory protein, arsR family 24 69 2.0E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_03305 b6ae1f4bd6245aac4c6dec8fdb712ea1 217 SMART SM00450 121 217 1.0E-17 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_25490 44349a542584996a795f3100933466b5 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 UP17_25490 44349a542584996a795f3100933466b5 184 Pfam PF12464 Maltose acetyltransferase 6 57 1.8E-11 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 UP17_25490 44349a542584996a795f3100933466b5 184 SUPERFAMILY SSF51161 3 183 1.66E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_25490 44349a542584996a795f3100933466b5 184 Gene3D G3DSA:2.160.10.10 1 184 4.7E-64 T 11-10-2018 UP17_25490 44349a542584996a795f3100933466b5 184 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.1E-6 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_25490 44349a542584996a795f3100933466b5 184 SMART SM01266 4 58 1.4E-11 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 UP17_24210 5a84c09e3c9a494d2040c86b752912fe 148 SUPERFAMILY SSF89623 1 144 4.97E-59 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 UP17_24210 5a84c09e3c9a494d2040c86b752912fe 148 Pfam PF02502 Ribose/Galactose Isomerase 3 140 5.0E-57 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 UP17_24210 5a84c09e3c9a494d2040c86b752912fe 148 Gene3D G3DSA:3.40.1400.10 1 148 1.2E-60 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 UP17_24210 5a84c09e3c9a494d2040c86b752912fe 148 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 4.0E-55 T 11-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 UP17_24210 5a84c09e3c9a494d2040c86b752912fe 148 PIRSF PIRSF005384 1 147 8.1E-60 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 UP17_24210 5a84c09e3c9a494d2040c86b752912fe 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 9.0E-62 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 UP17_19645 715863b791d8aa8228b14f605eac0a6b 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 8 212 6.9E-95 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 UP17_19645 715863b791d8aa8228b14f605eac0a6b 220 SMART SM00882 9 205 7.7E-62 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19645 715863b791d8aa8228b14f605eac0a6b 220 Gene3D G3DSA:3.40.1080.10 4 217 7.0E-91 T 11-10-2018 UP17_19645 715863b791d8aa8228b14f605eac0a6b 220 SUPERFAMILY SSF100950 6 216 3.49E-68 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_19645 715863b791d8aa8228b14f605eac0a6b 220 Pfam PF01144 Coenzyme A transferase 10 204 9.1E-38 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_24700 612da15197c910022f37842f4947f078 246 PIRSF PIRSF039085 3 246 2.2E-118 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 UP17_24700 612da15197c910022f37842f4947f078 246 Pfam PF00005 ABC transporter 22 170 4.9E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_24700 612da15197c910022f37842f4947f078 246 Gene3D G3DSA:3.40.50.300 2 245 8.0E-82 T 11-10-2018 UP17_24700 612da15197c910022f37842f4947f078 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_24700 612da15197c910022f37842f4947f078 246 SMART SM00382 31 218 1.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_24700 612da15197c910022f37842f4947f078 246 SUPERFAMILY SSF52540 6 240 3.22E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 Gene3D G3DSA:3.40.630.10 18 321 1.2E-56 T 11-10-2018 UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 Pfam PF00246 Zinc carboxypeptidase 43 305 2.7E-35 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 67 89 - T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 SUPERFAMILY SSF53187 23 316 7.28E-46 T 11-10-2018 UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 67 81 4.5E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 48 60 4.5E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 164 172 4.5E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_04695 e1d1c74c2230d9f85a39107af4e32634 322 SMART SM00631 25 300 2.8E-10 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 SUPERFAMILY SSF52540 1 350 3.19E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 372 104.582 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 366 1.4E-134 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 344 6.1E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 Gene3D G3DSA:3.40.50.300 6 344 3.5E-110 T 11-10-2018 UP17_00020 0bb1c6d0114ecaf48d3c3455f51d910c 372 Gene3D G3DSA:1.20.1050.90 119 311 3.5E-110 T 11-10-2018 UP17_11755 4f552b8a18fb670c8c2693531f319cb3 183 Pfam PF04167 Protein of unknown function (DUF402) 68 133 1.1E-11 T 11-10-2018 IPR007295 Domain of unknown function DUF402 UP17_11755 4f552b8a18fb670c8c2693531f319cb3 183 SUPERFAMILY SSF159234 33 135 1.57E-22 T 11-10-2018 IPR035930 FomD-like superfamily UP17_11755 4f552b8a18fb670c8c2693531f319cb3 183 Gene3D G3DSA:2.40.380.10 34 157 1.1E-5 T 11-10-2018 IPR035930 FomD-like superfamily UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 PIRSF PIRSF005962 1 389 3.7E-139 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 Gene3D G3DSA:3.30.70.360 180 294 1.2E-141 T 11-10-2018 UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 SUPERFAMILY SSF55031 181 290 7.98E-31 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 373 4.1E-118 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 Gene3D G3DSA:3.40.630.10 14 371 1.2E-141 T 11-10-2018 UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 Pfam PF01546 Peptidase family M20/M25/M40 71 381 2.8E-35 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 Pfam PF07687 Peptidase dimerisation domain 181 276 8.6E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_20445 35357add0aa32e226c03d5abec72b7d9 390 SUPERFAMILY SSF53187 2 386 5.39E-84 T 11-10-2018 UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 41 97 3.4E-14 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 Gene3D G3DSA:3.40.50.12780 65 523 6.4E-65 T 11-10-2018 UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 616 1.5E-6 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 8 653 2.2E-258 T 11-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 SUPERFAMILY SSF56801 40 632 1.15E-125 T 11-10-2018 UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 271 282 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 Pfam PF00501 AMP-binding enzyme 101 529 9.3E-51 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11835 2ce1ef3e4adb93fb660c8f0fcd4342c4 662 Gene3D G3DSA:3.30.300.30 526 643 2.1E-12 T 11-10-2018 UP17_09955 01effd6bea2c029ab94e049807158f3e 501 SMART SM00086 454 496 0.0036 T 11-10-2018 IPR001610 PAC motif UP17_09955 01effd6bea2c029ab94e049807158f3e 501 Gene3D G3DSA:3.30.450.20 383 501 2.0E-35 T 11-10-2018 UP17_09955 01effd6bea2c029ab94e049807158f3e 501 Pfam PF07690 Major Facilitator Superfamily 14 339 1.1E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_09955 01effd6bea2c029ab94e049807158f3e 501 Pfam PF13426 PAS domain 393 494 2.5E-17 T 11-10-2018 IPR000014 PAS domain UP17_09955 01effd6bea2c029ab94e049807158f3e 501 SUPERFAMILY SSF55785 393 493 1.48E-27 T 11-10-2018 IPR035965 PAS domain superfamily UP17_09955 01effd6bea2c029ab94e049807158f3e 501 SUPERFAMILY SSF103473 5 376 1.02E-57 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_09955 01effd6bea2c029ab94e049807158f3e 501 Gene3D G3DSA:1.20.1250.20 185 382 2.6E-48 T 11-10-2018 UP17_09955 01effd6bea2c029ab94e049807158f3e 501 SMART SM00091 382 448 1.5E-8 T 11-10-2018 IPR000014 PAS domain UP17_09955 01effd6bea2c029ab94e049807158f3e 501 Gene3D G3DSA:1.20.1250.20 2 177 3.3E-36 T 11-10-2018 UP17_09955 01effd6bea2c029ab94e049807158f3e 501 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 386 497 3.0E-17 T 11-10-2018 IPR000014 PAS domain UP17_22400 21dda3969cfda409677227d131716888 140 SUPERFAMILY SSF46785 2 135 5.27E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_22400 21dda3969cfda409677227d131716888 140 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 48 66 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site UP17_22400 21dda3969cfda409677227d131716888 140 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 133 7.5E-37 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_22400 21dda3969cfda409677227d131716888 140 Gene3D G3DSA:1.10.10.10 1 139 1.7E-42 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_22400 21dda3969cfda409677227d131716888 140 Pfam PF02082 Transcriptional regulator 1 81 2.1E-24 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_12190 4c9023115148b05893efb3dce300a798 372 Pfam PF01266 FAD dependent oxidoreductase 3 351 9.7E-52 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UP17_12190 4c9023115148b05893efb3dce300a798 372 Gene3D G3DSA:3.30.9.10 88 311 5.4E-80 T 11-10-2018 UP17_12190 4c9023115148b05893efb3dce300a798 372 Gene3D G3DSA:3.50.50.60 5 351 5.4E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_12190 4c9023115148b05893efb3dce300a798 372 SUPERFAMILY SSF54373 224 312 3.01E-12 T 11-10-2018 UP17_12190 4c9023115148b05893efb3dce300a798 372 SUPERFAMILY SSF51905 2 367 1.94E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 SUPERFAMILY SSF48179 176 469 8.75E-134 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 7.1E-137 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 Gene3D G3DSA:1.10.1040.10 180 435 5.3E-111 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 PIRSF PIRSF000109 1 470 1.1E-244 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 Gene3D G3DSA:1.20.5.320 436 469 2.4E-22 T 11-10-2018 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 1.3E-229 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 Gene3D G3DSA:3.40.50.720 1 179 7.1E-58 T 11-10-2018 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 173 8.5E-53 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 SMART SM01350 178 468 3.7E-230 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15920 a1f78f3640247d4b36879d1b39efa10e 470 SUPERFAMILY SSF51735 4 176 1.63E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 4.1E-6 T 11-10-2018 UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 SUPERFAMILY SSF51735 4 247 9.49E-97 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 Gene3D G3DSA:3.40.50.720 2 247 1.4E-94 T 11-10-2018 UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 1.3E-110 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.2E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07605 19aac6f36e0a413d2cbae9fd22c3dcb9 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 5.1E-75 T 11-10-2018 UP17_20425 e119d797c4f96ad922b339102792a3db 329 SUPERFAMILY SSF50129 4 147 4.26E-31 T 11-10-2018 IPR011032 GroES-like superfamily UP17_20425 e119d797c4f96ad922b339102792a3db 329 SMART SM00829 12 327 2.1E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_20425 e119d797c4f96ad922b339102792a3db 329 SUPERFAMILY SSF51735 117 291 2.14E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_20425 e119d797c4f96ad922b339102792a3db 329 Gene3D G3DSA:3.90.180.10 11 315 1.5E-100 T 11-10-2018 UP17_20425 e119d797c4f96ad922b339102792a3db 329 Gene3D G3DSA:3.40.50.720 138 263 1.5E-100 T 11-10-2018 UP17_20425 e119d797c4f96ad922b339102792a3db 329 Pfam PF00107 Zinc-binding dehydrogenase 155 268 1.2E-13 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_20425 e119d797c4f96ad922b339102792a3db 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 2.1E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_06870 48fa08444b3958d00b3bfebf5ac923ca 401 Pfam PF00563 EAL domain 11 232 1.4E-29 T 11-10-2018 IPR001633 EAL domain UP17_06870 48fa08444b3958d00b3bfebf5ac923ca 401 SUPERFAMILY SSF141868 11 242 9.42E-39 T 11-10-2018 IPR035919 EAL domain superfamily UP17_06870 48fa08444b3958d00b3bfebf5ac923ca 401 Gene3D G3DSA:3.20.20.450 1 225 4.7E-54 T 11-10-2018 IPR035919 EAL domain superfamily UP17_06870 48fa08444b3958d00b3bfebf5ac923ca 401 SUPERFAMILY SSF103190 259 397 4.94E-41 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_06870 48fa08444b3958d00b3bfebf5ac923ca 401 Gene3D G3DSA:3.30.450.20 286 401 5.9E-48 T 11-10-2018 UP17_06870 48fa08444b3958d00b3bfebf5ac923ca 401 Pfam PF10388 EAL-domain associated signalling protein domain 236 401 3.8E-70 T 11-10-2018 IPR018842 YkuI, C-terminal UP17_06870 48fa08444b3958d00b3bfebf5ac923ca 401 SMART SM00052 1 237 8.8E-13 T 11-10-2018 IPR001633 EAL domain UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 SUPERFAMILY SSF55785 81 192 1.66E-15 T 11-10-2018 IPR035965 PAS domain superfamily UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 Gene3D G3DSA:3.30.565.10 279 423 9.5E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 421 6.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 SUPERFAMILY SSF47384 201 273 2.75E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 402 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 421 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 1.3E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 272 4.8E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 Pfam PF00989 PAS fold 80 185 3.3E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 SUPERFAMILY SSF55874 265 426 8.38E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 Gene3D G3DSA:3.30.450.20 76 204 9.0E-18 T 11-10-2018 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 Gene3D G3DSA:1.10.287.130 216 273 8.0E-16 T 11-10-2018 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 79 197 3.6E-12 T 11-10-2018 IPR000014 PAS domain UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 SMART SM00388 213 276 1.8E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_06675 325cfff93efdf83ba3ee65a41c19eeea 442 SMART SM00387 318 424 4.3E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_06510 cac01603106dde010e45baa2aadd83d4 321 SUPERFAMILY SSF161098 94 302 4.71E-18 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06510 cac01603106dde010e45baa2aadd83d4 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 319 2.4E-40 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_06510 cac01603106dde010e45baa2aadd83d4 321 Gene3D G3DSA:1.10.3720.10 86 315 1.5E-20 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03905 63ff06e374ba3c17b75cd440ed4abc08 156 Pfam PF00578 AhpC/TSA family 5 132 8.4E-43 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_03905 63ff06e374ba3c17b75cd440ed4abc08 156 Gene3D G3DSA:3.40.30.10 1 154 6.1E-56 T 11-10-2018 UP17_03905 63ff06e374ba3c17b75cd440ed4abc08 156 PIRSF PIRSF000239 1 156 2.7E-30 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_03905 63ff06e374ba3c17b75cd440ed4abc08 156 SUPERFAMILY SSF52833 3 154 9.91E-58 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_25180 715f844de23d9ce1078dca297162d4f8 113 Pfam PF03551 Transcriptional regulator PadR-like family 16 90 3.6E-21 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_25180 715f844de23d9ce1078dca297162d4f8 113 Gene3D G3DSA:1.10.10.10 1 112 1.7E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_25180 715f844de23d9ce1078dca297162d4f8 113 SUPERFAMILY SSF46785 5 109 1.91E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_12140 a4f51d5652e72b179676438255332594 117 Gene3D G3DSA:3.40.1390.10 2 98 4.5E-27 T 11-10-2018 UP17_12140 a4f51d5652e72b179676438255332594 117 Pfam PF01225 Mur ligase family, catalytic domain 24 96 3.6E-11 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UP17_12140 a4f51d5652e72b179676438255332594 117 SUPERFAMILY SSF63418 8 99 1.96E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal UP17_09585 f052047a6f39a7c5cf720f262392b1f4 218 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 7 195 2.4E-11 T 11-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 UP17_03610 ff6a4edfb0222b479d07d3c1b706ca9c 136 SUPERFAMILY SSF55729 10 126 2.83E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_03610 ff6a4edfb0222b479d07d3c1b706ca9c 136 Pfam PF13673 Acetyltransferase (GNAT) domain 25 122 3.3E-9 T 11-10-2018 IPR000182 GNAT domain UP17_03610 ff6a4edfb0222b479d07d3c1b706ca9c 136 Gene3D G3DSA:3.40.630.30 5 129 2.2E-17 T 11-10-2018 UP17_07955 465c215418e9dc6564d98f46be94830a 386 PIRSF PIRSF006205 1 386 3.3E-161 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 UP17_07955 465c215418e9dc6564d98f46be94830a 386 SUPERFAMILY SSF69055 292 384 3.14E-31 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 UP17_07955 465c215418e9dc6564d98f46be94830a 386 Gene3D G3DSA:3.40.50.720 1 149 4.7E-49 T 11-10-2018 UP17_07955 465c215418e9dc6564d98f46be94830a 386 SUPERFAMILY SSF51735 2 149 9.86E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_07955 465c215418e9dc6564d98f46be94830a 386 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 228 7.6E-42 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 UP17_07955 465c215418e9dc6564d98f46be94830a 386 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 131 5.4E-42 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 UP17_07955 465c215418e9dc6564d98f46be94830a 386 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 382 47.352 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 UP17_07955 465c215418e9dc6564d98f46be94830a 386 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 379 2.7E-168 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 UP17_07955 465c215418e9dc6564d98f46be94830a 386 Gene3D G3DSA:1.10.1740.10 303 386 2.3E-27 T 11-10-2018 UP17_07955 465c215418e9dc6564d98f46be94830a 386 Pfam PF13288 DXP reductoisomerase C-terminal domain 260 377 3.5E-41 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 UP17_07955 465c215418e9dc6564d98f46be94830a 386 SUPERFAMILY SSF55347 125 263 1.01E-60 T 11-10-2018 UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 Pfam PF00106 short chain dehydrogenase 4 195 1.0E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 SUPERFAMILY SSF51735 3 228 9.01E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 Gene3D G3DSA:3.40.50.720 1 237 2.1E-42 T 11-10-2018 UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_02980 a1e5f4cc7542c502ecf224e6da6e2d5f 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_14120 46d208ebb103fee13f028cc29d048326 228 SMART SM00448 4 114 4.4E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_14120 46d208ebb103fee13f028cc29d048326 228 Gene3D G3DSA:1.10.10.10 131 228 4.4E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_14120 46d208ebb103fee13f028cc29d048326 228 Gene3D G3DSA:3.40.50.2300 1 130 4.3E-42 T 11-10-2018 UP17_14120 46d208ebb103fee13f028cc29d048326 228 SUPERFAMILY SSF52172 4 184 3.98E-45 T 11-10-2018 IPR011006 CheY-like superfamily UP17_14120 46d208ebb103fee13f028cc29d048326 228 SMART SM00862 152 224 2.3E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_14120 46d208ebb103fee13f028cc29d048326 228 Pfam PF00072 Response regulator receiver domain 6 115 6.7E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_14120 46d208ebb103fee13f028cc29d048326 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 9.1E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 1.2E-69 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Pfam PF03764 Elongation factor G, domain IV 477 595 1.3E-45 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Gene3D G3DSA:3.40.50.300 1 291 8.6E-112 T 11-10-2018 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Pfam PF14492 Elongation Factor G, domain II 402 475 1.3E-35 T 11-10-2018 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 113.277 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 SMART SM00838 598 685 1.4E-59 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like UP17_00675 919e90a3df727ab01839938c9cb8d067 692 SUPERFAMILY SSF50447 247 400 3.79E-36 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_00675 919e90a3df727ab01839938c9cb8d067 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 5.8E-43 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Gene3D G3DSA:2.40.30.10 292 403 1.4E-47 T 11-10-2018 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Gene3D G3DSA:3.30.70.870 404 481 1.3E-33 T 11-10-2018 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site UP17_00675 919e90a3df727ab01839938c9cb8d067 692 SUPERFAMILY SSF54211 477 597 3.79E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 2.0E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Gene3D G3DSA:3.30.70.240 602 672 2.1E-94 T 11-10-2018 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Pfam PF00679 Elongation factor G C-terminus 598 684 1.2E-32 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like UP17_00675 919e90a3df727ab01839938c9cb8d067 692 Gene3D G3DSA:3.30.230.10 482 685 2.1E-94 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_00675 919e90a3df727ab01839938c9cb8d067 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 SUPERFAMILY SSF54980 402 479 3.53E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_00675 919e90a3df727ab01839938c9cb8d067 692 SUPERFAMILY SSF54980 601 688 1.06E-31 T 11-10-2018 IPR035647 EF-G domain III/V-like UP17_00675 919e90a3df727ab01839938c9cb8d067 692 SMART SM00889 478 596 2.9E-73 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00675 919e90a3df727ab01839938c9cb8d067 692 SUPERFAMILY SSF52540 6 280 1.31E-109 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10410 67b9b90cf66b0370ea81afe60fcf9012 256 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 249 8.2E-77 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 UP17_10410 67b9b90cf66b0370ea81afe60fcf9012 256 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 244 2.8E-60 T 11-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 UP17_16580 6cddd30ff41eebf03e1627bce84cdc68 277 SUPERFAMILY SSF81345 6 268 1.31E-37 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_16580 6cddd30ff41eebf03e1627bce84cdc68 277 Pfam PF00950 ABC 3 transport family 7 271 2.0E-66 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 UP17_16580 6cddd30ff41eebf03e1627bce84cdc68 277 Gene3D G3DSA:1.10.3470.10 62 275 2.0E-9 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_22965 df78f5da917d6d48c53831664e16d023 231 Pfam PF06725 3D domain 128 189 2.3E-18 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 UP17_22965 df78f5da917d6d48c53831664e16d023 231 SUPERFAMILY SSF50685 128 169 3.17E-7 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_12955 ecc1b90952dee084a031b81d3bcc75c7 199 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 197 39.234 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_12955 ecc1b90952dee084a031b81d3bcc75c7 199 Gene3D G3DSA:3.40.50.300 3 199 7.3E-84 T 11-10-2018 UP17_12955 ecc1b90952dee084a031b81d3bcc75c7 199 SUPERFAMILY SSF52540 23 194 9.1E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12955 ecc1b90952dee084a031b81d3bcc75c7 199 Pfam PF01583 Adenylylsulphate kinase 27 179 1.5E-72 T 11-10-2018 UP17_12955 ecc1b90952dee084a031b81d3bcc75c7 199 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 9 193 1.9E-88 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 261 283 8.6E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 411 433 8.6E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 8.6E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 117 1.6E-16 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 615 5.1E-197 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 Pfam PF00361 Proton-conducting membrane transporter 130 419 2.9E-87 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 6.2E-59 T 11-10-2018 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 6.2E-59 T 11-10-2018 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 6.2E-59 T 11-10-2018 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 6.2E-59 T 11-10-2018 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 6.2E-59 T 11-10-2018 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 412 431 6.2E-59 T 11-10-2018 UP17_24095 f39d60ff9742eca3d5f805023c766d08 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 6.2E-59 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 2.6E-175 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 UP17_16010 d684188ec54d834e40e35b72019730a7 473 Gene3D G3DSA:3.50.50.60 163 285 4.3E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 1.9E-68 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 SUPERFAMILY SSF51905 3 377 2.29E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_16010 d684188ec54d834e40e35b72019730a7 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 UP17_16010 d684188ec54d834e40e35b72019730a7 473 Gene3D G3DSA:3.50.50.60 5 339 4.3E-113 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 3.7E-36 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 3.7E-36 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 3.7E-36 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 3.7E-36 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 3.7E-36 T 11-10-2018 UP17_16010 d684188ec54d834e40e35b72019730a7 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 3.5E-62 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_16010 d684188ec54d834e40e35b72019730a7 473 PIRSF PIRSF000350 2 468 5.6E-83 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 UP17_16010 d684188ec54d834e40e35b72019730a7 473 Gene3D G3DSA:3.30.390.30 353 473 4.5E-45 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_16010 d684188ec54d834e40e35b72019730a7 473 SUPERFAMILY SSF55424 350 472 6.53E-40 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_16010 d684188ec54d834e40e35b72019730a7 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 1.3E-36 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 Pfam PF01546 Peptidase family M20/M25/M40 69 367 6.2E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 Gene3D G3DSA:3.30.70.360 169 281 4.9E-80 T 11-10-2018 UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 PIRSF PIRSF005962 2 374 9.1E-95 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 Gene3D G3DSA:3.40.630.10 13 356 4.9E-80 T 11-10-2018 UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 359 1.5E-86 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 SUPERFAMILY SSF53187 5 367 2.07E-58 T 11-10-2018 UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 SUPERFAMILY SSF55031 174 278 2.49E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_04715 c26f9ed46da7fa2a0582bda0b0e2d7d9 382 Pfam PF07687 Peptidase dimerisation domain 177 266 1.3E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_07680 28a849f3ecee7bdc9ba369896a550f8a 261 Hamap MF_00052_B Ribonuclease HII [rnhB]. 74 252 36.086 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 UP17_07680 28a849f3ecee7bdc9ba369896a550f8a 261 Gene3D G3DSA:3.30.420.10 51 261 6.8E-77 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_07680 28a849f3ecee7bdc9ba369896a550f8a 261 SUPERFAMILY SSF53098 63 256 3.34E-68 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_07680 28a849f3ecee7bdc9ba369896a550f8a 261 Pfam PF01351 Ribonuclease HII 76 251 9.9E-32 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain UP17_23825 f4f048c507217eb9833352b0ebd14fed 367 Pfam PF13439 Glycosyltransferase Family 4 55 170 1.8E-16 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 UP17_23825 f4f048c507217eb9833352b0ebd14fed 367 SUPERFAMILY SSF53756 3 364 2.76E-74 T 11-10-2018 UP17_23825 f4f048c507217eb9833352b0ebd14fed 367 Gene3D G3DSA:3.40.50.2000 167 349 7.6E-69 T 11-10-2018 UP17_23825 f4f048c507217eb9833352b0ebd14fed 367 Gene3D G3DSA:3.40.50.2000 51 358 7.6E-69 T 11-10-2018 UP17_23825 f4f048c507217eb9833352b0ebd14fed 367 Pfam PF00534 Glycosyl transferases group 1 177 329 2.7E-32 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_04355 55131b9e8a0ac106763f54402a3bb0e6 485 Pfam PF00324 Amino acid permease 22 473 3.0E-132 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_04355 55131b9e8a0ac106763f54402a3bb0e6 485 PIRSF PIRSF006060 2 478 2.7E-85 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_04355 55131b9e8a0ac106763f54402a3bb0e6 485 Gene3D G3DSA:1.20.1740.10 13 477 3.5E-59 T 11-10-2018 UP17_04355 55131b9e8a0ac106763f54402a3bb0e6 485 ProSitePatterns PS00218 Amino acid permeases signature. 47 78 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 SUPERFAMILY SSF47781 132 210 1.67E-29 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 146 209 6.2E-24 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 Gene3D G3DSA:1.10.150.310 158 211 2.6E-15 T 11-10-2018 UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 Pfam PF10531 SLBB domain 64 118 4.6E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 SMART SM00278 188 207 7.5 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 SMART SM00278 158 177 0.086 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 Pfam PF12836 Helix-hairpin-helix motif 147 208 2.9E-23 T 11-10-2018 UP17_16835 cb956e15da91321c8e36fe373e1cdd23 211 Gene3D G3DSA:3.10.560.10 51 157 1.4E-7 T 11-10-2018 UP17_16145 99c508806092a8a9baf504206c5a5eea 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 2.9E-62 T 11-10-2018 IPR014198 Stage III sporulation protein AB UP17_16145 99c508806092a8a9baf504206c5a5eea 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 1.5E-53 T 11-10-2018 IPR014198 Stage III sporulation protein AB UP17_16145 99c508806092a8a9baf504206c5a5eea 171 PIRSF PIRSF021435 1 171 1.6E-62 T 11-10-2018 IPR014198 Stage III sporulation protein AB UP17_18345 faf739a9bebda796a205afe679d9a154 246 SMART SM00382 28 204 4.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_18345 faf739a9bebda796a205afe679d9a154 246 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_18345 faf739a9bebda796a205afe679d9a154 246 Gene3D G3DSA:3.40.50.300 1 215 6.6E-61 T 11-10-2018 UP17_18345 faf739a9bebda796a205afe679d9a154 246 SUPERFAMILY SSF52540 2 222 5.19E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_18345 faf739a9bebda796a205afe679d9a154 246 Pfam PF00005 ABC transporter 19 155 1.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_10565 bf01dd7b6224761214927f310151d53c 261 SUPERFAMILY SSF51735 3 255 1.27E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.3E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.1E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 PIRSF PIRSF000126 1 260 1.2E-72 T 11-10-2018 UP17_10565 bf01dd7b6224761214927f310151d53c 261 Pfam PF00106 short chain dehydrogenase 3 191 6.8E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10565 bf01dd7b6224761214927f310151d53c 261 Gene3D G3DSA:3.40.50.720 1 259 1.2E-57 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 SUPERFAMILY SSF81660 331 534 9.16E-58 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 2.5E-40 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 541 2.5E-40 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 2.5E-40 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 2.5E-40 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 2.5E-40 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 2.5E-40 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 181 1.3E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 428 576 2.5E-19 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 598 722 3.6E-38 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 212 345 8.4E-30 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 SMART SM00831 2 76 2.8E-23 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Pfam PF00689 Cation transporting ATPase, C-terminus 716 881 6.8E-51 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Pfam PF00122 E1-E2 ATPase 111 304 1.9E-55 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 54 882 1.1E-214 T 11-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 SUPERFAMILY SSF56784 322 736 1.8E-64 T 11-10-2018 IPR036412 HAD-like superfamily UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 646 2.3E-26 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Gene3D G3DSA:2.70.150.10 15 227 0.0 T 11-10-2018 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Gene3D G3DSA:3.40.50.1000 321 677 0.0 T 11-10-2018 IPR023214 HAD superfamily UP17_07475 271243a3ba8a7087a01675756e424c5f 892 SUPERFAMILY SSF81653 114 223 1.7E-30 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Pfam PF00690 Cation transporter/ATPase, N-terminus 8 71 3.9E-17 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 Gene3D G3DSA:3.40.1110.10 334 537 0.0 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 4.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 4.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 4.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 689 4.5E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_07475 271243a3ba8a7087a01675756e424c5f 892 SUPERFAMILY SSF81665 3 881 1.44E-135 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 UP17_04675 04da271492874d1192f9816ac7799e5c 515 Gene3D G3DSA:3.60.110.10 226 513 2.4E-56 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily UP17_04675 04da271492874d1192f9816ac7799e5c 515 SUPERFAMILY SSF55729 13 143 4.29E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_04675 04da271492874d1192f9816ac7799e5c 515 Gene3D G3DSA:3.40.630.30 8 225 2.5E-60 T 11-10-2018 UP17_04675 04da271492874d1192f9816ac7799e5c 515 Pfam PF00795 Carbon-nitrogen hydrolase 241 484 2.0E-27 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 UP17_04675 04da271492874d1192f9816ac7799e5c 515 Pfam PF00583 Acetyltransferase (GNAT) family 24 143 1.1E-10 T 11-10-2018 IPR000182 GNAT domain UP17_04675 04da271492874d1192f9816ac7799e5c 515 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 374 394 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site UP17_04675 04da271492874d1192f9816ac7799e5c 515 SUPERFAMILY SSF56317 224 494 3.66E-57 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily UP17_21425 32fe132742ac0786822177836e65756a 180 SUPERFAMILY SSF109854 10 167 1.83E-24 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_21425 32fe132742ac0786822177836e65756a 180 Pfam PF05163 DinB family 27 169 7.8E-11 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB UP17_21425 32fe132742ac0786822177836e65756a 180 Gene3D G3DSA:1.20.120.450 3 172 6.4E-30 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_02095 332713c4dca32510b5e3e6638dce533e 286 Pfam PF07870 Protein of unknown function (DUF1657) 238 280 5.5E-16 T 11-10-2018 IPR012452 Protein of unknown function DUF1657 UP17_02095 332713c4dca32510b5e3e6638dce533e 286 Gene3D G3DSA:3.30.240.20 170 229 1.1E-14 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_02095 332713c4dca32510b5e3e6638dce533e 286 Pfam PF04239 Protein of unknown function (DUF421) 89 204 1.0E-31 T 11-10-2018 IPR007353 Protein of unknown function DUF421 UP17_02095 332713c4dca32510b5e3e6638dce533e 286 Gene3D G3DSA:3.30.240.20 80 154 4.5E-22 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 SUPERFAMILY SSF81653 109 204 2.48E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 338 1.3E-31 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 371 601 1.2E-47 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 SUPERFAMILY SSF56784 290 556 4.47E-42 T 11-10-2018 IPR036412 HAD-like superfamily UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 9.7E-26 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 460 470 9.7E-26 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 9.7E-26 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 548 9.7E-26 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 532 9.7E-26 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 438 449 9.7E-26 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 8 673 0.0 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 Gene3D G3DSA:3.40.1110.10 317 448 4.2E-46 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 677 40.693 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 Gene3D G3DSA:2.70.150.20 102 209 7.5E-26 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 SUPERFAMILY SSF81665 32 296 1.19E-10 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 Pfam PF00122 E1-E2 ATPase 103 279 7.1E-35 T 11-10-2018 UP17_14510 27125f3dc6ddeea8e9ec8bb97cf4fe69 679 Pfam PF00702 haloacid dehalogenase-like hydrolase 298 527 4.4E-37 T 11-10-2018 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 SUPERFAMILY SSF55486 226 540 6.23E-107 T 11-10-2018 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 Gene3D G3DSA:3.10.170.10 229 378 2.4E-62 T 11-10-2018 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 Pfam PF03413 Peptidase propeptide and YPEB domain 149 218 1.4E-10 T 11-10-2018 IPR025711 PepSY domain UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 83 132 2.3E-13 T 11-10-2018 IPR011096 FTP domain UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 377 540 1.3E-64 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 Gene3D G3DSA:1.10.390.10 379 540 4.0E-70 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 231 374 5.2E-53 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 329 349 2.5E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 455 471 2.5E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 386 397 2.5E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_22480 99fbee18534de51dfcd3a42286cff0f9 541 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 365 381 2.5E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 UP17_10785 7cb8005dc772e68d800c9948f6a91ba3 315 Gene3D G3DSA:3.40.190.80 180 299 8.1E-13 T 11-10-2018 UP17_10785 7cb8005dc772e68d800c9948f6a91ba3 315 Gene3D G3DSA:3.30.540.10 2 137 3.0E-15 T 11-10-2018 UP17_10785 7cb8005dc772e68d800c9948f6a91ba3 315 SUPERFAMILY SSF56655 33 303 6.94E-24 T 11-10-2018 UP17_10785 7cb8005dc772e68d800c9948f6a91ba3 315 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 1.8E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_10785 7cb8005dc772e68d800c9948f6a91ba3 315 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.8E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_10785 7cb8005dc772e68d800c9948f6a91ba3 315 PRINTS PR00377 Inositol monophosphatase superfamily signature 241 265 1.8E-8 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_10785 7cb8005dc772e68d800c9948f6a91ba3 315 Pfam PF00459 Inositol monophosphatase family 30 300 1.8E-15 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 UP17_05020 cda3d8365e5edc7eb9315e0b846f2742 71 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 6 66 1.4E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05020 cda3d8365e5edc7eb9315e0b846f2742 71 PRINTS PR00344 Bacterial sensor protein C-terminal signature 13 23 1.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05020 cda3d8365e5edc7eb9315e0b846f2742 71 PRINTS PR00344 Bacterial sensor protein C-terminal signature 29 47 1.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05020 cda3d8365e5edc7eb9315e0b846f2742 71 PRINTS PR00344 Bacterial sensor protein C-terminal signature 53 66 1.1E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05020 cda3d8365e5edc7eb9315e0b846f2742 71 SUPERFAMILY SSF55874 6 65 3.31E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_05020 cda3d8365e5edc7eb9315e0b846f2742 71 Gene3D G3DSA:3.30.565.10 3 70 2.1E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23650 a95e52344e3e7555c973c0d805d64079 351 Pfam PF01032 FecCD transport family 34 347 7.3E-92 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 UP17_23650 a95e52344e3e7555c973c0d805d64079 351 SUPERFAMILY SSF81345 15 347 1.44E-81 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_23650 a95e52344e3e7555c973c0d805d64079 351 Gene3D G3DSA:1.10.3470.10 19 351 3.2E-96 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_11820 721fc68bcb4461829110bce29d0eabbb 415 SUPERFAMILY SSF52540 33 197 8.41E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_11820 721fc68bcb4461829110bce29d0eabbb 415 Pfam PF01926 50S ribosome-binding GTPase 50 179 5.1E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_11820 721fc68bcb4461829110bce29d0eabbb 415 Gene3D G3DSA:3.40.50.300 7 282 6.2E-27 T 11-10-2018 UP17_21855 25ac23854213713663403a56e59b3c08 171 Gene3D G3DSA:1.10.10.10 98 162 1.1E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21855 25ac23854213713663403a56e59b3c08 171 Pfam PF08281 Sigma-70, region 4 104 155 1.7E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_21855 25ac23854213713663403a56e59b3c08 171 SUPERFAMILY SSF88946 13 92 8.24E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_21855 25ac23854213713663403a56e59b3c08 171 SUPERFAMILY SSF88659 103 157 4.11E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_21855 25ac23854213713663403a56e59b3c08 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 156 2.5E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_21855 25ac23854213713663403a56e59b3c08 171 Gene3D G3DSA:1.10.1740.10 2 81 2.5E-17 T 11-10-2018 UP17_21855 25ac23854213713663403a56e59b3c08 171 Pfam PF04542 Sigma-70 region 2 18 79 1.8E-9 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_21045 4b50a5b8549910d2c68d67f6e3458107 422 Gene3D G3DSA:2.30.40.10 337 400 1.9E-47 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_21045 4b50a5b8549910d2c68d67f6e3458107 422 Gene3D G3DSA:2.30.40.10 17 48 5.5E-21 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_21045 4b50a5b8549910d2c68d67f6e3458107 422 SUPERFAMILY SSF51556 48 331 6.09E-54 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_21045 4b50a5b8549910d2c68d67f6e3458107 422 SUPERFAMILY SSF51338 2 410 2.65E-19 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_21045 4b50a5b8549910d2c68d67f6e3458107 422 Gene3D G3DSA:3.20.20.140 192 324 1.9E-47 T 11-10-2018 UP17_21045 4b50a5b8549910d2c68d67f6e3458107 422 Pfam PF01979 Amidohydrolase family 46 385 8.6E-39 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_21045 4b50a5b8549910d2c68d67f6e3458107 422 Gene3D G3DSA:3.20.20.140 49 153 5.5E-21 T 11-10-2018 UP17_10345 4d371c89e955f1b7ac6951643a2a32c6 80 Pfam PF01527 Transposase 4 69 1.8E-8 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_10345 4d371c89e955f1b7ac6951643a2a32c6 80 SUPERFAMILY SSF46689 6 80 2.87E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13755 df589a08bde18d0239a2fb565cc3c7a1 209 SUPERFAMILY SSF51735 1 199 3.16E-25 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13755 df589a08bde18d0239a2fb565cc3c7a1 209 Pfam PF13460 NAD(P)H-binding 12 185 1.1E-25 T 11-10-2018 IPR016040 NAD(P)-binding domain UP17_13755 df589a08bde18d0239a2fb565cc3c7a1 209 Gene3D G3DSA:3.40.50.720 1 209 2.0E-36 T 11-10-2018 UP17_11145 8ae291fd13fdb966bccac7c8bdce9c5c 343 SUPERFAMILY SSF56601 8 338 6.26E-74 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_11145 8ae291fd13fdb966bccac7c8bdce9c5c 343 Gene3D G3DSA:3.40.710.10 8 342 5.7E-110 T 11-10-2018 UP17_11145 8ae291fd13fdb966bccac7c8bdce9c5c 343 Pfam PF00144 Beta-lactamase 10 329 9.1E-46 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 Pfam PF00072 Response regulator receiver domain 6 119 9.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 153 256 2.8E-45 T 11-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 Gene3D G3DSA:1.10.10.10 144 263 1.9E-55 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 SUPERFAMILY SSF52172 2 136 5.55E-33 T 11-10-2018 IPR011006 CheY-like superfamily UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 SMART SM00448 4 119 3.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 152 262 2.0E-58 T 11-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 2 263 1.2E-132 T 11-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 PIRSF PIRSF002937 1 263 7.1E-132 T 11-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 SUPERFAMILY SSF46894 147 261 1.36E-48 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_16045 3d8a06004b2a2754fb4e653be48cf8c1 263 Gene3D G3DSA:3.40.50.2300 1 143 2.8E-32 T 11-10-2018 UP17_03440 924203d903f3418469f19412290cf819 449 Pfam PF08031 Berberine and berberine like 400 443 4.2E-19 T 11-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 UP17_03440 924203d903f3418469f19412290cf819 449 Gene3D G3DSA:3.30.43.10 8 86 2.2E-22 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 UP17_03440 924203d903f3418469f19412290cf819 449 Gene3D G3DSA:3.30.465.50 93 443 1.6E-96 T 11-10-2018 UP17_03440 924203d903f3418469f19412290cf819 449 Pfam PF01565 FAD binding domain 33 163 2.3E-26 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UP17_03440 924203d903f3418469f19412290cf819 449 Gene3D G3DSA:3.40.462.20 206 397 1.6E-96 T 11-10-2018 UP17_03440 924203d903f3418469f19412290cf819 449 SUPERFAMILY SSF56176 6 204 8.88E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_21300 db40579d4f2b2582fef2e9932cca82f3 192 Pfam PF01569 PAP2 superfamily 59 170 1.5E-19 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_21300 db40579d4f2b2582fef2e9932cca82f3 192 SUPERFAMILY SSF48317 3 171 1.16E-37 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily UP17_21300 db40579d4f2b2582fef2e9932cca82f3 192 Gene3D G3DSA:1.20.144.10 86 176 9.0E-19 T 11-10-2018 UP17_21300 db40579d4f2b2582fef2e9932cca82f3 192 SMART SM00014 56 165 4.4E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_23780 a9826a0fc06ede95defaf29c38b69002 139 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 3 138 4.6E-45 T 11-10-2018 IPR022258 Flagellar operon protein YvyF UP17_05210 4b881316cbef4d60de72617c44e4cd6d 362 SUPERFAMILY SSF52518 4 353 9.33E-105 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_05210 4b881316cbef4d60de72617c44e4cd6d 362 Gene3D G3DSA:3.40.50.970 1 352 4.0E-123 T 11-10-2018 UP17_05210 4b881316cbef4d60de72617c44e4cd6d 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 11 352 5.2E-140 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 UP17_05210 4b881316cbef4d60de72617c44e4cd6d 362 Pfam PF00676 Dehydrogenase E1 component 40 330 3.1E-93 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 Gene3D G3DSA:3.50.50.60 319 441 2.7E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 337 357 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 209 484 3.5E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 509 3.7E-241 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 SUPERFAMILY SSF51905 204 505 1.17E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 Gene3D G3DSA:3.50.50.60 209 499 2.7E-109 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 367 1.9E-40 T 11-10-2018 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 449 1.9E-40 T 11-10-2018 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 230 1.9E-40 T 11-10-2018 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 1.9E-40 T 11-10-2018 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 481 1.9E-40 T 11-10-2018 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 413 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 345 369 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 257 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 272 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 342 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 435 456 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 469 487 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 232 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 308 316 2.4E-66 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 SUPERFAMILY SSF52833 3 100 7.23E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 SUPERFAMILY SSF52833 103 194 1.23E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 PIRSF PIRSF000238 2 509 2.3E-257 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 Gene3D G3DSA:3.40.30.80 2 199 1.8E-58 T 11-10-2018 UP17_25455 7adab8e9e6a0a1c791f7fbd8cb56ae6c 509 Pfam PF13192 Thioredoxin domain 125 194 2.2E-8 T 11-10-2018 IPR012336 Thioredoxin-like fold UP17_05610 abea39cc0a06c92471acfc2463e13836 403 Pfam PF07687 Peptidase dimerisation domain 187 279 1.2E-8 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_05610 abea39cc0a06c92471acfc2463e13836 403 Pfam PF01546 Peptidase family M20/M25/M40 75 382 2.8E-28 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_05610 abea39cc0a06c92471acfc2463e13836 403 Gene3D G3DSA:3.40.630.10 16 373 5.5E-143 T 11-10-2018 UP17_05610 abea39cc0a06c92471acfc2463e13836 403 SUPERFAMILY SSF53187 3 390 7.78E-84 T 11-10-2018 UP17_05610 abea39cc0a06c92471acfc2463e13836 403 Gene3D G3DSA:3.30.70.360 183 297 5.5E-143 T 11-10-2018 UP17_05610 abea39cc0a06c92471acfc2463e13836 403 SUPERFAMILY SSF55031 183 302 4.19E-31 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_05610 abea39cc0a06c92471acfc2463e13836 403 PIRSF PIRSF005962 1 392 3.0E-130 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_05610 abea39cc0a06c92471acfc2463e13836 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 376 5.3E-120 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_23485 ae3e89ab0131d265ec432b4f6d21c353 83 Gene3D G3DSA:3.40.30.10 3 81 1.6E-17 T 11-10-2018 UP17_23485 ae3e89ab0131d265ec432b4f6d21c353 83 SUPERFAMILY SSF52833 6 82 2.59E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_23485 ae3e89ab0131d265ec432b4f6d21c353 83 Pfam PF05768 Glutaredoxin-like domain (DUF836) 10 64 1.9E-15 T 11-10-2018 IPR008554 Glutaredoxin-like UP17_05635 b5e6d124c8baade6668bccbd74884534 191 Gene3D G3DSA:1.10.10.60 2 48 3.9E-16 T 11-10-2018 UP17_05635 b5e6d124c8baade6668bccbd74884534 191 SUPERFAMILY SSF46689 4 79 1.33E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_05635 b5e6d124c8baade6668bccbd74884534 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_05635 b5e6d124c8baade6668bccbd74884534 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_05635 b5e6d124c8baade6668bccbd74884534 191 Gene3D G3DSA:1.10.357.10 49 191 9.7E-21 T 11-10-2018 UP17_05635 b5e6d124c8baade6668bccbd74884534 191 SUPERFAMILY SSF48498 76 189 1.21E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_05635 b5e6d124c8baade6668bccbd74884534 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.0E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_20495 75180cd534402d72f2e658c08c6fb814 128 SMART SM00347 19 116 2.9E-19 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20495 75180cd534402d72f2e658c08c6fb814 128 PRINTS PR00598 Bacterial regulatory protein MarR family signature 60 75 5.2E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20495 75180cd534402d72f2e658c08c6fb814 128 PRINTS PR00598 Bacterial regulatory protein MarR family signature 43 59 5.2E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20495 75180cd534402d72f2e658c08c6fb814 128 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 126 5.2E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_20495 75180cd534402d72f2e658c08c6fb814 128 Gene3D G3DSA:1.10.10.10 1 128 1.6E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20495 75180cd534402d72f2e658c08c6fb814 128 SUPERFAMILY SSF46785 2 126 1.37E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20495 75180cd534402d72f2e658c08c6fb814 128 Pfam PF01047 MarR family 26 76 2.9E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 Pfam PF13361 UvrD-like helicase C-terminal domain 280 619 1.7E-76 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 Gene3D G3DSA:3.40.50.300 283 637 3.6E-132 T 11-10-2018 UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 Gene3D G3DSA:3.40.50.300 12 277 2.8E-110 T 11-10-2018 UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 Gene3D G3DSA:1.10.10.160 116 190 2.8E-110 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 746 0.0 T 11-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 7.6E-87 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 Gene3D G3DSA:1.10.486.10 386 551 3.6E-132 T 11-10-2018 UP17_02035 a2a339dbd932715ec50804e7de4e6a68 748 SUPERFAMILY SSF52540 1 647 1.87E-192 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_21800 1ae7797c643c0161da6a2fc9d422fb0e 308 Gene3D G3DSA:1.10.1660.10 4 55 2.2E-8 T 11-10-2018 UP17_21800 1ae7797c643c0161da6a2fc9d422fb0e 308 Pfam PF12727 PBP superfamily domain 94 273 1.1E-56 T 11-10-2018 IPR024370 PBP domain UP17_21800 1ae7797c643c0161da6a2fc9d422fb0e 308 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 53 1.3E-15 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 UP17_21800 1ae7797c643c0161da6a2fc9d422fb0e 308 SUPERFAMILY SSF53850 83 293 1.02E-13 T 11-10-2018 UP17_21800 1ae7797c643c0161da6a2fc9d422fb0e 308 Pfam PF12728 Helix-turn-helix domain 7 53 3.6E-14 T 11-10-2018 UP17_21800 1ae7797c643c0161da6a2fc9d422fb0e 308 SUPERFAMILY SSF46955 7 53 5.86E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_16830 49af1b809aeb6d2f641a98842988eb77 186 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 106 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 UP17_16830 49af1b809aeb6d2f641a98842988eb77 186 PIRSF PIRSF006019 1 150 3.3E-60 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 UP17_16830 49af1b809aeb6d2f641a98842988eb77 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 1.9E-28 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain UP17_16830 49af1b809aeb6d2f641a98842988eb77 186 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 142 2.6E-85 T 11-10-2018 IPR013404 Competence operon E, ComEB UP17_16830 49af1b809aeb6d2f641a98842988eb77 186 SUPERFAMILY SSF53927 7 140 6.21E-41 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 UP17_16830 49af1b809aeb6d2f641a98842988eb77 186 Gene3D G3DSA:3.40.140.10 2 148 5.3E-47 T 11-10-2018 UP17_04580 20ff522a70a050d4e8870f392c44116f 273 SMART SM00257 84 129 6.6E-15 T 11-10-2018 IPR018392 LysM domain UP17_04580 20ff522a70a050d4e8870f392c44116f 273 SMART SM00257 26 69 2.7E-13 T 11-10-2018 IPR018392 LysM domain UP17_04580 20ff522a70a050d4e8870f392c44116f 273 Gene3D G3DSA:3.10.350.10 75 142 3.6E-17 T 11-10-2018 IPR036779 LysM domain superfamily UP17_04580 20ff522a70a050d4e8870f392c44116f 273 SUPERFAMILY SSF54001 146 272 5.89E-39 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_04580 20ff522a70a050d4e8870f392c44116f 273 Gene3D G3DSA:3.90.1720.10 143 273 2.9E-39 T 11-10-2018 UP17_04580 20ff522a70a050d4e8870f392c44116f 273 Gene3D G3DSA:3.10.350.10 22 74 1.2E-16 T 11-10-2018 IPR036779 LysM domain superfamily UP17_04580 20ff522a70a050d4e8870f392c44116f 273 Pfam PF01476 LysM domain 27 68 4.8E-12 T 11-10-2018 IPR018392 LysM domain UP17_04580 20ff522a70a050d4e8870f392c44116f 273 Pfam PF01476 LysM domain 85 128 1.4E-13 T 11-10-2018 IPR018392 LysM domain UP17_04580 20ff522a70a050d4e8870f392c44116f 273 Pfam PF00877 NlpC/P60 family 163 270 3.2E-29 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_04580 20ff522a70a050d4e8870f392c44116f 273 SUPERFAMILY SSF54106 25 68 1.31E-10 T 11-10-2018 UP17_04580 20ff522a70a050d4e8870f392c44116f 273 SUPERFAMILY SSF54106 84 128 1.7E-9 T 11-10-2018 UP17_16015 82042a94be2f02d1b977559434c63210 365 SUPERFAMILY SSF53223 4 143 1.54E-48 T 11-10-2018 UP17_16015 82042a94be2f02d1b977559434c63210 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 SUPERFAMILY SSF51735 141 348 3.41E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_16015 82042a94be2f02d1b977559434c63210 365 Gene3D G3DSA:3.40.50.10860 10 343 1.9E-154 T 11-10-2018 UP17_16015 82042a94be2f02d1b977559434c63210 365 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 130 3.4E-27 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 Gene3D G3DSA:3.40.50.720 134 336 1.9E-154 T 11-10-2018 UP17_16015 82042a94be2f02d1b977559434c63210 365 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 1.5E-6 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 348 1.4E-12 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 PIRSF PIRSF000188 1 353 2.8E-169 T 11-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 UP17_16015 82042a94be2f02d1b977559434c63210 365 SMART SM00839 144 351 6.5E-76 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_16015 82042a94be2f02d1b977559434c63210 365 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 Gene3D G3DSA:3.30.930.10 101 430 9.0E-119 T 11-10-2018 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 Gene3D G3DSA:2.40.50.140 2 99 4.8E-23 T 11-10-2018 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 429 1.1E-167 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 SUPERFAMILY SSF50249 9 102 9.71E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_15175 9c8499ddfef739109f8c558e240c5355 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 1.9E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 42.243 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 SUPERFAMILY SSF55681 110 424 9.12E-98 T 11-10-2018 UP17_15175 9c8499ddfef739109f8c558e240c5355 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 5.9E-87 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_05540 de32607741330cbd66032203732c82ad 27 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 4 27 6.1E-14 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like UP17_05540 de32607741330cbd66032203732c82ad 27 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 4 27 1.2E-11 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like UP17_09365 78b5a0274dc5e381dfcb22888b3bb62a 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 340 1.1E-86 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 UP17_09365 78b5a0274dc5e381dfcb22888b3bb62a 374 Gene3D G3DSA:3.20.20.70 3 369 3.0E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_09365 78b5a0274dc5e381dfcb22888b3bb62a 374 SUPERFAMILY SSF51395 1 345 2.93E-100 T 11-10-2018 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 Gene3D G3DSA:3.40.50.300 8 180 7.3E-44 T 11-10-2018 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 SUPERFAMILY SSF52540 13 171 2.86E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01925 c03f1f286da3be36daba513ac3489afd 185 Pfam PF01202 Shikimate kinase 19 174 2.2E-42 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 Hamap MF_00109 Shikimate kinase [aroK]. 10 175 23.617 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 ProSitePatterns PS01128 Shikimate kinase signature. 66 91 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 PRINTS PR01100 Shikimate kinase family signature 65 73 4.2E-15 T 11-10-2018 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 PRINTS PR01100 Shikimate kinase family signature 83 92 4.2E-15 T 11-10-2018 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 PRINTS PR01100 Shikimate kinase family signature 37 50 4.2E-15 T 11-10-2018 UP17_01925 c03f1f286da3be36daba513ac3489afd 185 PRINTS PR01100 Shikimate kinase family signature 13 28 4.2E-15 T 11-10-2018 UP17_16505 01f9b4088afc257d14066c5af2465c74 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 6 211 1.7E-59 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 UP17_16505 01f9b4088afc257d14066c5af2465c74 217 Gene3D G3DSA:1.20.58.220 3 217 1.7E-69 T 11-10-2018 IPR038078 PhoU-like domain superfamily UP17_16505 01f9b4088afc257d14066c5af2465c74 217 PIRSF PIRSF003107 1 217 1.4E-57 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 UP17_16505 01f9b4088afc257d14066c5af2465c74 217 Pfam PF01895 PhoU domain 121 203 2.0E-20 T 11-10-2018 IPR026022 PhoU domain UP17_16505 01f9b4088afc257d14066c5af2465c74 217 Pfam PF01895 PhoU domain 19 105 4.0E-19 T 11-10-2018 IPR026022 PhoU domain UP17_16505 01f9b4088afc257d14066c5af2465c74 217 SUPERFAMILY SSF109755 4 214 1.47E-61 T 11-10-2018 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 Pfam PF00202 Aminotransferase class-III 77 451 5.0E-105 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 Gene3D G3DSA:3.90.1150.10 40 450 1.6E-181 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 21 451 3.5E-199 T 11-10-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 SUPERFAMILY SSF53383 78 451 1.09E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 PIRSF PIRSF000521 60 173 1.0E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 PIRSF PIRSF000521 217 454 8.7E-43 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 PIRSF PIRSF000521 169 207 0.072 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 Gene3D G3DSA:3.40.640.10 105 355 1.6E-181 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_15450 a8ba4dc2acd0b0aa4a71c3162784c32b 456 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 270 307 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_22200 2d372d75234cb6d758fab1cc52b1c98f 306 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 22 298 4.1E-36 T 11-10-2018 UP17_22200 2d372d75234cb6d758fab1cc52b1c98f 306 Pfam PF01040 UbiA prenyltransferase family 30 263 3.8E-36 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 UP17_22200 2d372d75234cb6d758fab1cc52b1c98f 306 Gene3D G3DSA:1.20.120.1780 197 306 6.7E-5 T 11-10-2018 UP17_22200 2d372d75234cb6d758fab1cc52b1c98f 306 PIRSF PIRSF005355 10 305 1.6E-88 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 UP17_22200 2d372d75234cb6d758fab1cc52b1c98f 306 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 13 300 19.7 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 UP17_11560 5ee155f60093e6ab9eee328cefcf8e74 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 2.1E-9 T 11-10-2018 UP17_11560 5ee155f60093e6ab9eee328cefcf8e74 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 2.1E-9 T 11-10-2018 UP17_11560 5ee155f60093e6ab9eee328cefcf8e74 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 2.1E-9 T 11-10-2018 UP17_11560 5ee155f60093e6ab9eee328cefcf8e74 68 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 66 16.678 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_11560 5ee155f60093e6ab9eee328cefcf8e74 68 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 1.5E-17 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_11560 5ee155f60093e6ab9eee328cefcf8e74 68 Pfam PF02416 mttA/Hcf106 family 5 55 3.1E-19 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 UP17_05180 282850951b62ea98e86250a77da53074 193 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 9 186 1.7E-59 T 11-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 UP17_05180 282850951b62ea98e86250a77da53074 193 Gene3D G3DSA:1.10.1760.20 3 191 2.9E-56 T 11-10-2018 UP17_05180 282850951b62ea98e86250a77da53074 193 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 190 9.8E-55 T 11-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 SMART SM00382 363 550 1.0E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 Gene3D G3DSA:3.40.50.300 325 576 1.2E-89 T 11-10-2018 UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 SUPERFAMILY SSF90123 15 325 3.79E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 SUPERFAMILY SSF52540 329 574 1.93E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 Pfam PF00664 ABC transporter transmembrane region 28 295 1.3E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 Gene3D G3DSA:1.20.1560.10 1 324 1.9E-85 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_01025 8b4e9e7a5a46d15534d14a4687bbe680 581 Pfam PF00005 ABC transporter 354 504 1.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_17565 825c52a658467a57f8258f25550a8db4 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 159 2.6E-26 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 UP17_17565 825c52a658467a57f8258f25550a8db4 172 Pfam PF04093 rod shape-determining protein MreD 4 163 4.0E-24 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Pfam PF00204 DNA gyrase B 228 397 1.6E-64 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Gene3D G3DSA:3.30.230.10 227 405 2.3E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 SUPERFAMILY SSF56719 401 632 1.62E-92 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 178 7.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 SUPERFAMILY SSF55874 11 223 3.67E-73 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Pfam PF01751 Toprim domain 426 537 1.6E-18 T 11-10-2018 IPR006171 TOPRIM domain UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Gene3D G3DSA:3.40.50.670 406 641 2.3E-109 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 SMART SM00433 40 634 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 641 98.256 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 630 1.2E-31 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 367 381 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 11 21 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 610 626 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 186 201 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 227 249 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 201 214 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 477 486 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 594 606 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 319 335 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR01159 DNA gyrase subunit B signature 381 401 1.3E-78 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 Gene3D G3DSA:3.30.565.10 7 226 7.6E-92 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 275 288 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 427 441 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 118 132 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 40 55 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 493 509 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 573 589 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 75 88 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 511 528 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 PRINTS PR00418 DNA topoisomerase II family signature 531 543 3.3E-72 T 11-10-2018 UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 SUPERFAMILY SSF54211 228 398 1.21E-62 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 SMART SM00387 36 180 6.4E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_00030 665ea0de09c6cdd7b48ff62f1c8c6dac 641 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 641 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UP17_20680 431a7d3bb8603c224f898eed8fb57585 485 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 10 455 4.0E-123 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 UP17_20680 431a7d3bb8603c224f898eed8fb57585 485 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 472 45.959 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 Gene3D G3DSA:3.90.640.10 181 254 7.2E-124 T 11-10-2018 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 5 331 1.0E-136 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 SUPERFAMILY SSF53067 144 329 4.2E-49 T 11-10-2018 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 SUPERFAMILY SSF53067 6 143 2.13E-41 T 11-10-2018 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 Pfam PF06723 MreB/Mbl protein 5 331 5.0E-143 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 9.7E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 9.7E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 9.7E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 9.7E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 9.7E-55 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 Gene3D G3DSA:3.30.420.40 7 319 7.2E-124 T 11-10-2018 UP17_02680 ac76691922a5d70c1523ec14c247f673 335 Gene3D G3DSA:3.30.420.40 149 312 7.2E-124 T 11-10-2018 UP17_13180 2c850dbe662d2441f45c54ed55e596b4 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 321 3.3E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_13180 2c850dbe662d2441f45c54ed55e596b4 337 SMART SM00382 33 242 3.3E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13180 2c850dbe662d2441f45c54ed55e596b4 337 SUPERFAMILY SSF52540 4 255 4.11E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13180 2c850dbe662d2441f45c54ed55e596b4 337 Gene3D G3DSA:3.40.50.300 1 334 5.6E-103 T 11-10-2018 UP17_13180 2c850dbe662d2441f45c54ed55e596b4 337 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_13180 2c850dbe662d2441f45c54ed55e596b4 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 1.0E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_13180 2c850dbe662d2441f45c54ed55e596b4 337 Pfam PF00005 ABC transporter 25 184 1.0E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_18920 ccd54c9f3917d45130834e9156993c29 221 PIRSF PIRSF006293 3 221 2.7E-81 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 UP17_18920 ccd54c9f3917d45130834e9156993c29 221 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 219 51.857 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 UP17_18920 ccd54c9f3917d45130834e9156993c29 221 Gene3D G3DSA:3.40.50.620 3 220 2.0E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_18920 ccd54c9f3917d45130834e9156993c29 221 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 206 1.2E-84 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 UP17_18920 ccd54c9f3917d45130834e9156993c29 221 SUPERFAMILY SSF52402 4 213 2.05E-69 T 11-10-2018 UP17_18920 ccd54c9f3917d45130834e9156993c29 221 Pfam PF06508 Queuosine biosynthesis protein QueC 6 213 9.0E-87 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 UP17_19995 8f4e19816170ad58b05bf631ad88c97d 690 Gene3D G3DSA:3.40.50.300 347 530 5.7E-21 T 11-10-2018 UP17_19995 8f4e19816170ad58b05bf631ad88c97d 690 Pfam PF07728 AAA domain (dynein-related subfamily) 364 515 1.1E-7 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 UP17_19995 8f4e19816170ad58b05bf631ad88c97d 690 SUPERFAMILY SSF52540 345 529 3.23E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10940 f3f1875b6d5bbb8f6bdb61fe795e1005 171 SUPERFAMILY SSF54427 8 171 2.07E-38 T 11-10-2018 IPR032710 NTF2-like domain superfamily UP17_10940 f3f1875b6d5bbb8f6bdb61fe795e1005 171 Pfam PF00866 Ring hydroxylating beta subunit 21 163 1.1E-35 T 11-10-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0006725|GO:0055114 UP17_10940 f3f1875b6d5bbb8f6bdb61fe795e1005 171 Gene3D G3DSA:3.10.450.50 2 171 1.8E-50 T 11-10-2018 UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 436 3.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 SUPERFAMILY SSF47384 222 289 7.46E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 SUPERFAMILY SSF55874 310 434 2.36E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 Gene3D G3DSA:1.10.287.130 207 292 8.0E-8 T 11-10-2018 UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 SMART SM00387 331 438 1.8E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 8.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 370 384 8.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 8.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_01575 2d9ea1a0cc475b511818353045ffa3ce 441 Gene3D G3DSA:3.30.565.10 296 439 2.9E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 Gene3D G3DSA:3.10.50.10 321 375 3.5E-74 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 Gene3D G3DSA:3.20.20.80 130 410 3.5E-74 T 11-10-2018 UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 SUPERFAMILY SSF54106 54 98 7.46E-6 T 11-10-2018 UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 Pfam PF01476 LysM domain 5 46 5.7E-10 T 11-10-2018 IPR018392 LysM domain UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 Pfam PF01476 LysM domain 55 98 1.4E-7 T 11-10-2018 IPR018392 LysM domain UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 Gene3D G3DSA:3.10.350.10 52 98 7.7E-11 T 11-10-2018 IPR036779 LysM domain superfamily UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 SMART SM00257 54 98 6.8E-8 T 11-10-2018 IPR018392 LysM domain UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 SMART SM00257 3 46 9.1E-10 T 11-10-2018 IPR018392 LysM domain UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 SUPERFAMILY SSF51445 118 412 1.03E-34 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 SUPERFAMILY SSF54106 2 46 2.09E-8 T 11-10-2018 UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 Pfam PF00704 Glycosyl hydrolases family 18 185 402 2.7E-21 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 Gene3D G3DSA:3.10.350.10 2 47 2.4E-10 T 11-10-2018 IPR036779 LysM domain superfamily UP17_13380 a35eb1a57cee0b38bac75219e56f393c 420 SMART SM00636 133 404 2.0E-7 T 11-10-2018 IPR011583 Chitinase II GO:0008061 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 PIRSF PIRSF006294 1 527 1.3E-242 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 Gene3D G3DSA:2.170.8.10 38 330 1.2E-224 T 11-10-2018 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 Gene3D G3DSA:3.40.449.10 28 213 1.2E-224 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 SUPERFAMILY SSF68923 13 212 8.2E-81 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 481 5.5E-227 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 SUPERFAMILY SSF53795 213 523 2.98E-135 T 11-10-2018 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 1 526 2.1E-249 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 527 55.648 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 UP17_22040 8e3c5b877da0be5a4fdc80a5e540945e 528 Gene3D G3DSA:3.90.228.20 214 513 1.2E-224 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 UP17_19400 1069a6a0401e7380ea5b7b1a09ab79d4 427 SUPERFAMILY SSF53383 8 413 8.21E-84 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_19400 1069a6a0401e7380ea5b7b1a09ab79d4 427 Gene3D G3DSA:3.40.640.10 46 315 1.6E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_19400 1069a6a0401e7380ea5b7b1a09ab79d4 427 TIGRFAM TIGR01814 kynureninase: kynureninase 12 411 8.6E-121 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 UP17_19400 1069a6a0401e7380ea5b7b1a09ab79d4 427 PIRSF PIRSF038800 4 419 5.2E-158 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 UP17_19400 1069a6a0401e7380ea5b7b1a09ab79d4 427 Hamap MF_01970 Kynureninase [kynU]. 4 411 40.338 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 UP17_19400 1069a6a0401e7380ea5b7b1a09ab79d4 427 Pfam PF00266 Aminotransferase class-V 63 376 3.6E-26 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_19400 1069a6a0401e7380ea5b7b1a09ab79d4 427 Gene3D G3DSA:3.90.1150.10 15 411 1.6E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_06890 7ccb1a646f3fb6db8cfdd516759fe86d 319 Gene3D G3DSA:3.60.15.10 10 279 3.3E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06890 7ccb1a646f3fb6db8cfdd516759fe86d 319 SMART SM00849 24 228 1.4E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_06890 7ccb1a646f3fb6db8cfdd516759fe86d 319 SUPERFAMILY SSF56281 22 275 2.75E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06890 7ccb1a646f3fb6db8cfdd516759fe86d 319 Pfam PF00753 Metallo-beta-lactamase superfamily 28 228 1.8E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_25555 ac3ff1dc1db80d5a3d75559ed4f959a4 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 313 6.1E-151 T 11-10-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 UP17_25555 ac3ff1dc1db80d5a3d75559ed4f959a4 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 2.3E-39 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_25555 ac3ff1dc1db80d5a3d75559ed4f959a4 314 SUPERFAMILY SSF161098 92 290 1.78E-16 T 11-10-2018 IPR035906 MetI-like superfamily UP17_25555 ac3ff1dc1db80d5a3d75559ed4f959a4 314 Gene3D G3DSA:1.10.3720.10 81 309 1.5E-21 T 11-10-2018 IPR035906 MetI-like superfamily UP17_14455 07229ca4c2630bae3dba321952432ce1 231 Gene3D G3DSA:3.60.160.10 12 227 1.8E-30 T 11-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily UP17_14455 07229ca4c2630bae3dba321952432ce1 231 SUPERFAMILY SSF51219 28 226 1.83E-54 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily UP17_14455 07229ca4c2630bae3dba321952432ce1 231 Pfam PF01987 Mitochondrial biogenesis AIM24 27 220 3.6E-37 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 UP17_17005 778c22c95469a59ff8e64c6c66201c49 141 Gene3D G3DSA:3.30.420.140 1 141 6.9E-53 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 UP17_17005 778c22c95469a59ff8e64c6c66201c49 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 28.482 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 UP17_17005 778c22c95469a59ff8e64c6c66201c49 141 Pfam PF03652 Holliday junction resolvase 1 135 2.8E-46 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 UP17_17005 778c22c95469a59ff8e64c6c66201c49 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 9.7E-54 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 UP17_17005 778c22c95469a59ff8e64c6c66201c49 141 SUPERFAMILY SSF53098 1 137 3.19E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_17005 778c22c95469a59ff8e64c6c66201c49 141 SMART SM00732 1 103 4.9E-40 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 UP17_08440 81d69e72417ea90f2c3dde69906eaf46 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 41 402 6.9E-111 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_08440 81d69e72417ea90f2c3dde69906eaf46 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 1.0E-44 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_08440 81d69e72417ea90f2c3dde69906eaf46 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.4E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_08440 81d69e72417ea90f2c3dde69906eaf46 442 SUPERFAMILY SSF56672 38 401 1.86E-53 T 11-10-2018 UP17_06575 d8999df66f14fa60a58d38a642c06ddf 138 Pfam PF02566 OsmC-like protein 41 135 1.9E-18 T 11-10-2018 IPR003718 OsmC/Ohr family UP17_06575 d8999df66f14fa60a58d38a642c06ddf 138 SUPERFAMILY SSF82784 4 137 5.76E-41 T 11-10-2018 IPR036102 OsmC/Ohr superfamily UP17_06575 d8999df66f14fa60a58d38a642c06ddf 138 Gene3D G3DSA:3.30.300.20 45 137 1.2E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_06575 d8999df66f14fa60a58d38a642c06ddf 138 Gene3D G3DSA:2.20.25.10 1 44 1.9E-19 T 11-10-2018 UP17_06575 d8999df66f14fa60a58d38a642c06ddf 138 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 135 2.1E-54 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 SUPERFAMILY SSF81799 113 214 1.07E-36 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 1.5E-129 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 Pfam PF01795 MraW methylase family 2 309 1.4E-135 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 Gene3D G3DSA:3.40.50.150 4 306 2.0E-105 T 11-10-2018 UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 PIRSF PIRSF004486 1 310 3.7E-110 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 SUPERFAMILY SSF53335 4 309 1.67E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.238 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 UP17_07275 b6f5cdf339e280a630be51d97c3ee9f3 310 Gene3D G3DSA:1.10.150.170 111 216 2.0E-105 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 UP17_16625 8681eaf6729e02501202c7c1123b3012 121 PIRSF PIRSF000025 1 121 5.3E-35 T 11-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 UP17_16625 8681eaf6729e02501202c7c1123b3012 121 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 51 117 1.4E-14 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_16625 8681eaf6729e02501202c7c1123b3012 121 Gene3D G3DSA:1.10.760.10 52 121 2.8E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 UP17_16625 8681eaf6729e02501202c7c1123b3012 121 SUPERFAMILY SSF46626 1 120 1.07E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 Gene3D G3DSA:3.50.50.60 120 248 2.0E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 Pfam PF13192 Thioredoxin domain 472 547 1.1E-17 T 11-10-2018 IPR012336 Thioredoxin-like fold UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 7.6E-35 T 11-10-2018 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 7.6E-35 T 11-10-2018 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 7.6E-35 T 11-10-2018 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 7.6E-35 T 11-10-2018 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 7.6E-35 T 11-10-2018 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 297 8.0E-47 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 SUPERFAMILY SSF52833 341 453 1.35E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 2.9E-64 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 SUPERFAMILY SSF51905 1 306 1.77E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 SUPERFAMILY SSF52833 457 547 3.53E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 Gene3D G3DSA:3.40.30.80 341 548 2.5E-63 T 11-10-2018 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 Gene3D G3DSA:3.50.50.60 8 307 2.0E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PIRSF PIRSF000238 1 313 9.8E-64 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 PIRSF PIRSF000238 341 548 7.0E-35 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 UP17_15660 7092f0fba3bd523c5096cc9b20011ceb 548 TIGRFAM TIGR03143 AhpF_homolog: putative alkyl hydroperoxide reductase F subunit 1 545 1.4E-247 T 11-10-2018 IPR017561 Alkyl hydroperoxide reductase F subunit homogue, putative UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 8 239 1.0E-135 T 11-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 SUPERFAMILY SSF88946 26 131 2.22E-35 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 SUPERFAMILY SSF88659 143 237 4.67E-22 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 Gene3D G3DSA:1.20.120.1810 30 131 1.6E-25 T 11-10-2018 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 Pfam PF04545 Sigma-70, region 4 180 233 8.5E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 3.0E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 PIRSF PIRSF000770 3 239 4.9E-79 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_07360 50d068a8e0bfdb0b86ded3f97ab5142d 239 Gene3D G3DSA:1.10.10.10 168 239 5.3E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_23740 968a365ca2fd036f454fb5483d85c688 415 Gene3D G3DSA:1.10.8.410 365 415 2.0E-26 T 11-10-2018 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 Gene3D G3DSA:3.30.70.2120 175 313 5.6E-72 T 11-10-2018 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 Gene3D G3DSA:1.20.1330.10 42 364 5.6E-72 T 11-10-2018 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 5.7E-45 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 SUPERFAMILY SSF64518 1 415 7.19E-98 T 11-10-2018 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 Pfam PF00700 Bacterial flagellin C-terminal helical region 329 414 2.8E-27 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 PRINTS PR00207 Flagellin signature 35 52 1.0E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 PRINTS PR00207 Flagellin signature 109 132 1.0E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UP17_23740 968a365ca2fd036f454fb5483d85c688 415 PRINTS PR00207 Flagellin signature 74 93 1.0E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 Pfam PF04055 Radical SAM superfamily 59 213 2.3E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 Gene3D G3DSA:3.20.20.70 11 319 2.0E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 TIGRFAM TIGR00433 bioB: biotin synthase 23 315 8.3E-120 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 SMART SM00729 50 255 1.8E-34 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 PIRSF PIRSF001619 1 321 8.0E-128 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 SMART SM00876 226 316 1.7E-32 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 226 315 2.7E-14 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 SUPERFAMILY SSF102114 10 317 2.94E-71 T 11-10-2018 UP17_21805 e321ee02d5ee5fae4f495e80c07f1be8 321 Hamap MF_01694 Biotin synthase [bioB]. 10 317 40.249 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 UP17_13130 d8c35bbc0dee635c7595806d2a1a589f 352 Pfam PF10282 Lactonase, 7-bladed beta-propeller 12 351 3.1E-127 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller UP17_13130 d8c35bbc0dee635c7595806d2a1a589f 352 SUPERFAMILY SSF51004 16 351 6.8E-43 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily UP17_13130 d8c35bbc0dee635c7595806d2a1a589f 352 Gene3D G3DSA:2.130.10.10 10 352 5.1E-121 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 UP17_06615 c2432e9a27e9dff0eec280f8bd6c43a3 235 SUPERFAMILY SSF52172 1 136 5.83E-37 T 11-10-2018 IPR011006 CheY-like superfamily UP17_06615 c2432e9a27e9dff0eec280f8bd6c43a3 235 PIRSF PIRSF006171 1 227 2.8E-79 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 UP17_06615 c2432e9a27e9dff0eec280f8bd6c43a3 235 Pfam PF00072 Response regulator receiver domain 4 115 1.3E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_06615 c2432e9a27e9dff0eec280f8bd6c43a3 235 SMART SM00448 2 115 1.3E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_06615 c2432e9a27e9dff0eec280f8bd6c43a3 235 Gene3D G3DSA:3.40.50.12740 2 204 6.9E-34 T 11-10-2018 UP17_07370 7da5eca66ae682b27e2413386b9ea07d 89 Gene3D G3DSA:2.30.30.240 2 77 2.1E-12 T 11-10-2018 UP17_07370 7da5eca66ae682b27e2413386b9ea07d 89 SUPERFAMILY SSF50346 3 75 2.01E-13 T 11-10-2018 IPR011033 PRC-barrel-like superfamily UP17_07370 7da5eca66ae682b27e2413386b9ea07d 89 Pfam PF05239 PRC-barrel domain 3 75 1.8E-12 T 11-10-2018 IPR027275 PRC-barrel domain UP17_07370 7da5eca66ae682b27e2413386b9ea07d 89 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 75 4.6E-28 T 11-10-2018 IPR014238 Sporulation protein YlmC/YmxH UP17_19270 1aed28ccfaa828488583cadfb6f6c2f5 170 Pfam PF13302 Acetyltransferase (GNAT) domain 5 145 9.7E-18 T 11-10-2018 IPR000182 GNAT domain UP17_19270 1aed28ccfaa828488583cadfb6f6c2f5 170 SUPERFAMILY SSF55729 3 167 3.09E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_19270 1aed28ccfaa828488583cadfb6f6c2f5 170 Gene3D G3DSA:3.40.630.30 1 168 4.2E-27 T 11-10-2018 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 4.0E-146 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 Gene3D G3DSA:3.30.930.10 1 204 1.1E-106 T 11-10-2018 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 SUPERFAMILY SSF55681 1 280 1.89E-130 T 11-10-2018 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 288 2.1E-164 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 5.8E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 5.8E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 5.8E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 5.8E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 5.8E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 5.8E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 Gene3D G3DSA:1.20.58.180 205 285 9.5E-36 T 11-10-2018 UP17_16665 6bdbb864b1588c054a7b52eb0778ae5e 298 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 57.58 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_08045 f10644265ea455517f7aadae8ab2a898 89 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 75 2.7E-28 T 11-10-2018 IPR014238 Sporulation protein YlmC/YmxH UP17_08045 f10644265ea455517f7aadae8ab2a898 89 Gene3D G3DSA:2.30.30.240 2 78 3.4E-8 T 11-10-2018 UP17_08045 f10644265ea455517f7aadae8ab2a898 89 Pfam PF05239 PRC-barrel domain 2 78 6.4E-14 T 11-10-2018 IPR027275 PRC-barrel domain UP17_08045 f10644265ea455517f7aadae8ab2a898 89 SUPERFAMILY SSF50346 2 74 3.06E-11 T 11-10-2018 IPR011033 PRC-barrel-like superfamily UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 Gene3D G3DSA:3.40.50.720 2 181 5.7E-48 T 11-10-2018 UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 Pfam PF01842 ACT domain 298 350 2.1E-6 T 11-10-2018 IPR002912 ACT domain UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 SUPERFAMILY SSF55021 291 347 5.0E-7 T 11-10-2018 UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 Gene3D G3DSA:3.30.70.260 300 359 8.2E-6 T 11-10-2018 UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 Pfam PF02153 Prephenate dehydrogenase 17 274 8.5E-75 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 SUPERFAMILY SSF48179 175 284 9.07E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 SUPERFAMILY SSF51735 4 171 5.81E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15365 bab60dbaccb0539dde4c1fd1704db8c5 367 Gene3D G3DSA:1.10.3660.10 182 296 2.0E-36 T 11-10-2018 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Gene3D G3DSA:1.10.10.10 333 508 2.0E-47 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Pfam PF09382 RQC domain 401 508 3.1E-31 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Pfam PF00270 DEAD/DEAH box helicase 20 180 6.2E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 583 2.9E-240 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Gene3D G3DSA:1.10.150.80 509 591 5.0E-23 T 11-10-2018 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 1.8E-147 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Pfam PF00570 HRDC domain 517 580 5.6E-21 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 SMART SM00487 13 210 9.9E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_13590 645e58cd442026d2ca3609198315a7d0 706 SUPERFAMILY SSF52540 57 344 1.51E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13590 645e58cd442026d2ca3609198315a7d0 706 SMART SM00341 512 592 2.6E-17 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Pfam PF16124 RecQ zinc-binding 334 396 1.8E-16 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain UP17_13590 645e58cd442026d2ca3609198315a7d0 706 SUPERFAMILY SSF46785 395 537 2.45E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Pfam PF00271 Helicase conserved C-terminal domain 219 322 3.9E-19 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Pfam PF14493 Helix-turn-helix domain 610 698 1.7E-22 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Gene3D G3DSA:3.40.50.300 201 332 2.7E-41 T 11-10-2018 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 Gene3D G3DSA:3.40.50.300 1 200 8.6E-76 T 11-10-2018 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 SUPERFAMILY SSF47819 513 589 1.85E-24 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 UP17_13590 645e58cd442026d2ca3609198315a7d0 706 SMART SM00490 242 323 7.7E-28 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_13590 645e58cd442026d2ca3609198315a7d0 706 SMART SM00956 404 507 1.1E-39 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 UP17_23090 c60872d8f97856e1aef9982a7390ed88 335 SUPERFAMILY SSF51261 126 322 9.94E-35 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_23090 c60872d8f97856e1aef9982a7390ed88 335 Gene3D G3DSA:2.70.70.10 127 334 3.5E-56 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_23090 c60872d8f97856e1aef9982a7390ed88 335 Pfam PF01551 Peptidase family M23 211 309 5.6E-19 T 11-10-2018 IPR016047 Peptidase M23 UP17_18095 27aea537c140d829886c42570ca79a15 126 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 1.2E-36 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 UP17_18095 27aea537c140d829886c42570ca79a15 126 SUPERFAMILY SSF56276 2 113 1.82E-39 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 UP17_18095 27aea537c140d829886c42570ca79a15 126 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 31.754 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 UP17_18095 27aea537c140d829886c42570ca79a15 126 Gene3D G3DSA:3.30.360.110 1 62 9.1E-26 T 11-10-2018 UP17_18095 27aea537c140d829886c42570ca79a15 126 Gene3D G3DSA:3.30.160.750 63 124 5.8E-18 T 11-10-2018 UP17_18095 27aea537c140d829886c42570ca79a15 126 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 9.9E-41 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 UP17_02690 712f1dcc2c35b4b5ca425655134929b9 365 PIRSF PIRSF038991 3 361 1.7E-85 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 UP17_02690 712f1dcc2c35b4b5ca425655134929b9 365 Pfam PF05145 Transition state regulatory protein AbrB 36 352 2.6E-79 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 UP17_02690 712f1dcc2c35b4b5ca425655134929b9 365 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 15 168 2.9E-37 T 11-10-2018 IPR017516 AbrB duplication UP17_02690 712f1dcc2c35b4b5ca425655134929b9 365 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 198 352 4.9E-32 T 11-10-2018 IPR017516 AbrB duplication UP17_19510 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_08565 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13735 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19130 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_17380 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_11230 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_10140 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13820 85d8afc03f6c53692b2a003c861d5d3d 141 SUPERFAMILY SSF46689 29 133 1.79E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_13530 25686e464c6041115120c9af3d85c5f0 657 Pfam PF00326 Prolyl oligopeptidase family 449 657 1.1E-52 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 UP17_13530 25686e464c6041115120c9af3d85c5f0 657 Gene3D G3DSA:2.120.10.30 1 152 9.8E-26 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like UP17_13530 25686e464c6041115120c9af3d85c5f0 657 SUPERFAMILY SSF53474 402 657 1.09E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_13530 25686e464c6041115120c9af3d85c5f0 657 Pfam PF07676 WD40-like Beta Propeller Repeat 58 91 1.6E-10 T 11-10-2018 IPR011659 WD40-like Beta Propeller UP17_13530 25686e464c6041115120c9af3d85c5f0 657 Pfam PF07676 WD40-like Beta Propeller Repeat 194 207 0.038 T 11-10-2018 IPR011659 WD40-like Beta Propeller UP17_13530 25686e464c6041115120c9af3d85c5f0 657 Gene3D G3DSA:3.40.50.1820 407 657 5.0E-72 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_13530 25686e464c6041115120c9af3d85c5f0 657 Gene3D G3DSA:2.120.10.30 163 406 2.5E-18 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like UP17_13530 25686e464c6041115120c9af3d85c5f0 657 SUPERFAMILY SSF82171 13 394 5.23E-42 T 11-10-2018 UP17_23080 5a05fb51ffd6c4899696cedc13aaac8c 219 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 14 182 9.1E-24 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like UP17_24205 ff441ed1149252c7d6bd56435d2bfb83 198 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 22 187 5.0E-64 T 11-10-2018 IPR006340 Protein of unknown function DUF436 UP17_24205 ff441ed1149252c7d6bd56435d2bfb83 198 PIRSF PIRSF007510 9 190 8.9E-79 T 11-10-2018 IPR006340 Protein of unknown function DUF436 UP17_24205 ff441ed1149252c7d6bd56435d2bfb83 198 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 17 187 3.1E-75 T 11-10-2018 IPR006340 Protein of unknown function DUF436 UP17_24205 ff441ed1149252c7d6bd56435d2bfb83 198 Gene3D G3DSA:3.40.50.10360 11 197 2.4E-79 T 11-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like UP17_24205 ff441ed1149252c7d6bd56435d2bfb83 198 Hamap MF_00800 UPF0340 protein . 1 198 88.873 T 11-10-2018 IPR006340 Protein of unknown function DUF436 UP17_24205 ff441ed1149252c7d6bd56435d2bfb83 198 Pfam PF04260 Protein of unknown function (DUF436) 18 187 4.0E-77 T 11-10-2018 IPR006340 Protein of unknown function DUF436 UP17_24205 ff441ed1149252c7d6bd56435d2bfb83 198 SUPERFAMILY SSF110710 14 189 3.4E-75 T 11-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like UP17_07210 4474f038e90b22ce3c61a12b19fd35c6 265 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 11-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 UP17_07210 4474f038e90b22ce3c61a12b19fd35c6 265 Gene3D G3DSA:3.40.1090.10 97 217 3.4E-22 T 11-10-2018 UP17_07210 4474f038e90b22ce3c61a12b19fd35c6 265 Gene3D G3DSA:3.40.1090.10 1 96 1.2E-27 T 11-10-2018 UP17_07210 4474f038e90b22ce3c61a12b19fd35c6 265 SUPERFAMILY SSF52151 1 255 8.2E-60 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase UP17_07210 4474f038e90b22ce3c61a12b19fd35c6 265 Pfam PF01734 Patatin-like phospholipase 8 164 1.7E-22 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 UP17_10635 653e0ffd6de482cc36f4aabc6223c626 177 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 UP17_10635 653e0ffd6de482cc36f4aabc6223c626 177 Pfam PF00578 AhpC/TSA family 41 158 1.2E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_10635 653e0ffd6de482cc36f4aabc6223c626 177 Gene3D G3DSA:3.40.30.10 17 177 4.2E-48 T 11-10-2018 UP17_10635 653e0ffd6de482cc36f4aabc6223c626 177 SUPERFAMILY SSF52833 38 176 3.21E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Pfam PF00378 Enoyl-CoA hydratase/isomerase 487 624 3.1E-9 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Gene3D G3DSA:3.40.50.720 2 208 2.9E-66 T 11-10-2018 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 SUPERFAMILY SSF48179 206 325 1.45E-21 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 SUPERFAMILY SSF52096 482 791 9.95E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 SUPERFAMILY SSF48179 357 448 2.13E-17 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Gene3D G3DSA:1.10.1040.10 209 333 1.9E-18 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Gene3D G3DSA:1.10.1040.10 359 478 1.9E-7 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 SUPERFAMILY SSF51735 4 206 1.12E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 205 6.7E-45 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Gene3D G3DSA:3.90.226.10 483 673 6.0E-28 T 11-10-2018 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 363 416 1.0E-4 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_23200 ed89e33c4e7e098b87cde69942c2dd30 794 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 208 305 8.2E-10 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 Gene3D G3DSA:3.40.50.720 11 317 5.3E-124 T 11-10-2018 UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 155 182 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 232 248 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 SUPERFAMILY SSF51735 107 294 1.21E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 SUPERFAMILY SSF52283 7 141 3.59E-35 T 11-10-2018 UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 Gene3D G3DSA:3.40.50.720 105 292 5.3E-124 T 11-10-2018 UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 293 1.5E-64 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UP17_06270 677cbcea97c519a7cd1da27f9474b228 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 324 3.3E-29 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 UP17_06265 c0dc84bf86e074c55e785f88b75ca7ad 318 SUPERFAMILY SSF56281 5 305 1.44E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06265 c0dc84bf86e074c55e785f88b75ca7ad 318 Gene3D G3DSA:3.60.15.10 3 260 2.5E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06265 c0dc84bf86e074c55e785f88b75ca7ad 318 Pfam PF00753 Metallo-beta-lactamase superfamily 19 232 1.0E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_06265 c0dc84bf86e074c55e785f88b75ca7ad 318 SMART SM00849 19 232 7.2E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_10895 057c44587cf40aaa970ad13e38a71806 268 Gene3D G3DSA:3.40.50.1820 3 267 4.4E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 206 220 2.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 Pfam PF08386 TAP-like protein 203 264 5.7E-5 T 11-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal UP17_10895 057c44587cf40aaa970ad13e38a71806 268 Pfam PF00561 alpha/beta hydrolase fold 21 119 2.1E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 SUPERFAMILY SSF53474 6 262 2.01E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00412 Epoxide hydrolase signature 104 117 8.8E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00412 Epoxide hydrolase signature 26 44 8.8E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00412 Epoxide hydrolase signature 90 103 8.8E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_10895 057c44587cf40aaa970ad13e38a71806 268 PRINTS PR00412 Epoxide hydrolase signature 237 259 8.8E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_10195 7656f6804ca383891784c5cc122b5f41 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10195 7656f6804ca383891784c5cc122b5f41 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10195 7656f6804ca383891784c5cc122b5f41 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10195 7656f6804ca383891784c5cc122b5f41 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.6E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10195 7656f6804ca383891784c5cc122b5f41 301 Gene3D G3DSA:3.40.190.290 92 300 8.9E-21 T 11-10-2018 UP17_10195 7656f6804ca383891784c5cc122b5f41 301 Pfam PF03466 LysR substrate binding domain 90 296 2.1E-20 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_10195 7656f6804ca383891784c5cc122b5f41 301 SUPERFAMILY SSF53850 91 298 1.54E-23 T 11-10-2018 UP17_10195 7656f6804ca383891784c5cc122b5f41 301 SUPERFAMILY SSF46785 1 104 6.6E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10195 7656f6804ca383891784c5cc122b5f41 301 Gene3D G3DSA:1.10.10.10 1 83 2.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_25630 331adac67bcdf21f91cbf14d2228d4f9 476 SUPERFAMILY SSF53098 30 470 8.34E-66 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_25630 331adac67bcdf21f91cbf14d2228d4f9 476 Pfam PF01609 Transposase DDE domain 120 382 3.1E-44 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 Pfam PF07497 Rho termination factor, RNA-binding domain 53 126 4.3E-31 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 413 3.2E-203 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 SMART SM00357 54 119 3.8E-20 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 361 2.0E-18 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 Pfam PF07498 Rho termination factor, N-terminal domain 8 49 3.0E-16 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 Gene3D G3DSA:1.10.720.10 1 47 2.2E-20 T 11-10-2018 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 415 221.299 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 Gene3D G3DSA:3.40.50.300 131 413 3.5E-121 T 11-10-2018 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 SMART SM00959 7 49 8.3E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 SMART SM00382 168 353 8.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 SUPERFAMILY SSF52540 91 369 3.24E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 Gene3D G3DSA:2.40.50.140 48 124 5.5E-29 T 11-10-2018 UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 SUPERFAMILY SSF50249 51 126 6.0E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_24265 56da5ddfab501194f9cedd5ee862b70c 429 SUPERFAMILY SSF68912 4 49 3.61E-11 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily UP17_00405 d86ac9a0cd749f575180cfafcdf9f33b 259 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 249 1.1E-82 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 UP17_00405 d86ac9a0cd749f575180cfafcdf9f33b 259 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 37.459 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 UP17_00405 d86ac9a0cd749f575180cfafcdf9f33b 259 SUPERFAMILY SSF53067 124 253 3.02E-40 T 11-10-2018 UP17_00405 d86ac9a0cd749f575180cfafcdf9f33b 259 SUPERFAMILY SSF53067 1 122 2.12E-38 T 11-10-2018 UP17_00405 d86ac9a0cd749f575180cfafcdf9f33b 259 Pfam PF03309 Type III pantothenate kinase 3 206 2.9E-74 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 UP17_00405 d86ac9a0cd749f575180cfafcdf9f33b 259 Gene3D G3DSA:3.30.420.40 1 88 1.3E-34 T 11-10-2018 UP17_00405 d86ac9a0cd749f575180cfafcdf9f33b 259 Gene3D G3DSA:3.30.420.40 89 259 4.2E-62 T 11-10-2018 UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 SMART SM00966 8 52 1.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 2.1E-88 T 11-10-2018 IPR014213 Sporulation stage V, protein T UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 PIRSF PIRSF026579 1 178 6.2E-93 T 11-10-2018 IPR014213 Sporulation stage V, protein T UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 Gene3D G3DSA:3.30.450.40 56 178 4.6E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 1.2E-45 T 11-10-2018 IPR039472 Sporulation stage V protein T, GAF domain UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily UP17_00325 2b6a00de62a5dee04517cc64332224b0 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 11-10-2018 UP17_10280 d2dbb0ff4870fa6a28166c628147eda1 513 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 45 498 4.4E-178 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_10280 d2dbb0ff4870fa6a28166c628147eda1 513 PIRSF PIRSF005690 31 513 8.5E-178 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 3.1E-117 T 11-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 46.197 T 11-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 Gene3D G3DSA:2.160.10.10 85 236 7.3E-52 T 11-10-2018 UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 200 2.0E-10 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 SUPERFAMILY SSF51161 89 225 5.13E-50 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 7.9E-35 T 11-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 1.6E-9 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 6.4E-4 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_06915 3d992980f29d31fa5a6c9cc41446e015 236 Gene3D G3DSA:3.30.70.250 1 84 5.0E-34 T 11-10-2018 UP17_12460 c4d901b322d3af784a7f6996eec62306 697 Gene3D G3DSA:3.40.50.280 557 696 2.8E-38 T 11-10-2018 UP17_12460 c4d901b322d3af784a7f6996eec62306 697 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 39 496 1.7E-99 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_12460 c4d901b322d3af784a7f6996eec62306 697 SUPERFAMILY SSF52242 531 694 7.2E-37 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_12460 c4d901b322d3af784a7f6996eec62306 697 Gene3D G3DSA:3.20.20.240 4 549 8.1E-166 T 11-10-2018 UP17_12460 c4d901b322d3af784a7f6996eec62306 697 Pfam PF01642 Methylmalonyl-CoA mutase 39 577 6.9E-156 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_12460 c4d901b322d3af784a7f6996eec62306 697 SUPERFAMILY SSF51703 6 527 5.49E-151 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 214 1.6E-26 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 Gene3D G3DSA:3.30.950.10 123 237 7.3E-41 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 Gene3D G3DSA:3.40.1010.10 2 122 4.5E-45 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 SUPERFAMILY SSF53790 14 231 1.7E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 PIRSF PIRSF005917 3 292 1.6E-101 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 36.415 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 UP17_00220 16d1acea18143274cf49f0c5fd7c0081 293 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 289 5.7E-79 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 UP17_07325 dde91b4f5fee46a7cf176f593836ba48 260 Gene3D G3DSA:3.40.50.10960 117 233 1.9E-40 T 11-10-2018 UP17_07325 dde91b4f5fee46a7cf176f593836ba48 260 Gene3D G3DSA:3.10.20.310 50 116 4.2E-5 T 11-10-2018 UP17_07325 dde91b4f5fee46a7cf176f593836ba48 260 Pfam PF08478 POTRA domain, FtsQ-type 52 118 1.8E-18 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type UP17_07325 dde91b4f5fee46a7cf176f593836ba48 260 Hamap MF_00912 Cell division protein DivIB [divIB]. 9 252 29.493 T 11-10-2018 IPR026580 Cell division protein DivIB UP17_07325 dde91b4f5fee46a7cf176f593836ba48 260 Pfam PF03799 Cell division protein FtsQ 122 238 7.7E-10 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 SUPERFAMILY SSF54631 250 373 2.01E-25 T 11-10-2018 UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 Gene3D G3DSA:3.40.50.300 1 251 2.7E-75 T 11-10-2018 UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 Gene3D G3DSA:3.10.580.10 252 372 1.6E-36 T 11-10-2018 UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 SMART SM00116 258 306 1.3E-6 T 11-10-2018 IPR000644 CBS domain UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 SMART SM00116 318 366 6.4E-7 T 11-10-2018 IPR000644 CBS domain UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 SUPERFAMILY SSF52540 2 240 3.13E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 Pfam PF00571 CBS domain 251 303 4.1E-10 T 11-10-2018 IPR000644 CBS domain UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 Pfam PF00571 CBS domain 312 363 2.7E-7 T 11-10-2018 IPR000644 CBS domain UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 Pfam PF00005 ABC transporter 18 163 5.7E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 SMART SM00382 27 221 2.9E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12360 0bc6f4c787ac126cbc417a84b34de43e 381 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 13 371 1.3E-165 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 UP17_24135 542f7e14e024a16b5a3ec2c6dc8488bc 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.475 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 UP17_24135 542f7e14e024a16b5a3ec2c6dc8488bc 124 Gene3D G3DSA:1.20.58.1610 3 124 5.8E-43 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24135 542f7e14e024a16b5a3ec2c6dc8488bc 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 2.0E-37 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 468 479 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 Pfam PF00920 Dehydratase family 36 556 3.2E-228 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 SUPERFAMILY SSF52016 379 560 2.35E-60 T 11-10-2018 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 560 47.815 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 SUPERFAMILY SSF143975 4 378 8.11E-143 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 Gene3D G3DSA:3.50.30.80 379 531 2.0E-54 T 11-10-2018 UP17_14415 d3d13b6d2b3a1892a6b903e3270068e8 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 19 560 1.7E-259 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 UP17_05105 a2c9699efadf6962924665821063fec4 333 SUPERFAMILY SSF51412 1 331 2.44E-63 T 11-10-2018 UP17_05105 a2c9699efadf6962924665821063fec4 333 Pfam PF03060 Nitronate monooxygenase 3 330 1.9E-100 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 UP17_05105 a2c9699efadf6962924665821063fec4 333 Gene3D G3DSA:3.20.20.70 1 333 8.0E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_17055 6e723a05f727ffdd8c0432c71ee44f37 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 358 41.74 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 UP17_17055 6e723a05f727ffdd8c0432c71ee44f37 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 357 7.1E-143 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 UP17_17055 6e723a05f727ffdd8c0432c71ee44f37 371 Gene3D G3DSA:3.40.50.620 1 213 3.8E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_17055 6e723a05f727ffdd8c0432c71ee44f37 371 Gene3D G3DSA:2.30.30.280 214 278 5.8E-27 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 UP17_17055 6e723a05f727ffdd8c0432c71ee44f37 371 Gene3D G3DSA:2.40.30.10 279 370 1.1E-29 T 11-10-2018 UP17_17055 6e723a05f727ffdd8c0432c71ee44f37 371 SUPERFAMILY SSF52402 7 244 3.31E-61 T 11-10-2018 UP17_17055 6e723a05f727ffdd8c0432c71ee44f37 371 Pfam PF03054 tRNA methyl transferase 9 357 1.5E-150 T 11-10-2018 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 2.9E-164 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 Gene3D G3DSA:1.10.580.10 25 351 4.1E-129 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 2.6E-130 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 Gene3D G3DSA:1.10.230.10 220 318 4.1E-129 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 PRINTS PR00143 Citrate synthase signature 172 187 4.4E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 PRINTS PR00143 Citrate synthase signature 247 267 4.4E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 PRINTS PR00143 Citrate synthase signature 324 338 4.4E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 PRINTS PR00143 Citrate synthase signature 123 136 4.4E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 PRINTS PR00143 Citrate synthase signature 194 222 4.4E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 PRINTS PR00143 Citrate synthase signature 304 320 4.4E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 SUPERFAMILY SSF48256 2 371 4.97E-135 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 PIRSF PIRSF001369 1 371 1.3E-155 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type UP17_18160 306bc7ed3d7ef0d0be9f1cb8e0bec2ee 371 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 Gene3D G3DSA:3.90.780.10 279 459 4.7E-14 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 PRINTS PR01607 Apyrase family signature 188 211 7.0E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 PRINTS PR01607 Apyrase family signature 169 186 7.0E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 PRINTS PR01607 Apyrase family signature 328 351 7.0E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 PRINTS PR01607 Apyrase family signature 408 427 7.0E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 PRINTS PR01607 Apyrase family signature 3 21 7.0E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 PRINTS PR01607 Apyrase family signature 216 236 7.0E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 SUPERFAMILY SSF56300 5 287 5.89E-60 T 11-10-2018 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 Pfam PF00149 Calcineurin-like phosphoesterase 7 205 1.4E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 Gene3D G3DSA:3.60.21.10 2 274 1.3E-52 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 Pfam PF02872 5'-nucleotidase, C-terminal domain 291 421 1.7E-12 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 SUPERFAMILY SSF55816 284 457 1.1E-25 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_23110 9962b0aeeb294ccf5a09d3a0f9b330e8 461 PIRSF PIRSF036361 1 459 6.5E-172 T 11-10-2018 IPR011240 Phosphoesterase-related protein YunD UP17_13640 9c3cfa453e769256b79c6c4466bd683b 173 Pfam PF08445 FR47-like protein 85 146 4.2E-14 T 11-10-2018 IPR013653 FR47-like GO:0016747 UP17_13640 9c3cfa453e769256b79c6c4466bd683b 173 Gene3D G3DSA:3.40.630.30 1 168 1.3E-36 T 11-10-2018 UP17_13640 9c3cfa453e769256b79c6c4466bd683b 173 SUPERFAMILY SSF55729 1 153 7.38E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 Pfam PF00176 SNF2 family N-terminal domain 79 296 2.0E-34 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 Gene3D G3DSA:3.40.50.10810 57 294 1.4E-58 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 SUPERFAMILY SSF52540 12 238 2.21E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 Gene3D G3DSA:3.40.50.300 343 547 4.6E-46 T 11-10-2018 UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 SUPERFAMILY SSF52540 168 518 1.09E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 SMART SM00490 386 466 1.6E-19 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 Pfam PF00271 Helicase conserved C-terminal domain 360 466 8.7E-21 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_16230 c49af36ee18c0c6f917365502e3eb077 562 SMART SM00487 56 235 2.0E-29 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_24130 9ae8fd590e46118e64729ef726441d8e 170 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 9 160 42.869 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24130 9ae8fd590e46118e64729ef726441d8e 170 SUPERFAMILY SSF56770 19 163 3.4E-66 T 11-10-2018 UP17_24130 9ae8fd590e46118e64729ef726441d8e 170 Gene3D G3DSA:3.40.50.12280 3 169 6.1E-77 T 11-10-2018 UP17_24130 9ae8fd590e46118e64729ef726441d8e 170 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 46 155 4.8E-26 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24130 9ae8fd590e46118e64729ef726441d8e 170 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 20 161 1.6E-72 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 4 339 1.4E-154 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 Pfam PF01706 FliG C-terminal domain 222 329 2.2E-42 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 Gene3D G3DSA:1.10.220.30 108 199 2.3E-35 T 11-10-2018 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 Gene3D G3DSA:1.10.220.30 200 339 8.5E-50 T 11-10-2018 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 Pfam PF14841 FliG middle domain 120 194 4.5E-33 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 SUPERFAMILY SSF48029 119 330 1.57E-71 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 SUPERFAMILY SSF48029 11 104 5.23E-21 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PIRSF PIRSF003161 4 339 1.7E-126 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 Pfam PF14842 FliG N-terminal domain 10 112 7.5E-37 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 231 251 7.0E-78 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 200 225 7.0E-78 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 10 26 7.0E-78 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 277 303 7.0E-78 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 39 65 7.0E-78 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 253 273 7.0E-78 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 PRINTS PR00954 Flagellar motor switch protein FliG signature 119 142 7.0E-78 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 UP17_07775 b4188c546eaa16d63b189adb87044c5b 339 Gene3D G3DSA:1.10.220.30 4 90 1.1E-20 T 11-10-2018 UP17_22360 7bca3520f5ba87f2585e614ab60e2a6a 123 Gene3D G3DSA:3.90.1150.30 1 122 8.5E-8 T 11-10-2018 IPR038056 YjbR-like superfamily UP17_22360 7bca3520f5ba87f2585e614ab60e2a6a 123 Pfam PF04237 YjbR 18 105 1.5E-11 T 11-10-2018 IPR007351 Uncharacterised protein YjbR UP17_22360 7bca3520f5ba87f2585e614ab60e2a6a 123 SUPERFAMILY SSF142906 11 120 1.57E-18 T 11-10-2018 IPR038056 YjbR-like superfamily UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 SUPERFAMILY SSF54919 1 148 1.31E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 SMART SM00562 1 138 1.0E-90 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.165 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 Gene3D G3DSA:3.30.70.141 1 148 1.1E-63 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 1.3E-58 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_15395 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 SUPERFAMILY SSF48179 175 466 4.56E-120 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 177 466 3.1E-123 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 Gene3D G3DSA:1.20.5.320 435 467 2.0E-17 T 11-10-2018 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 172 1.7E-52 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 Gene3D G3DSA:1.10.1040.10 179 434 1.5E-101 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 SMART SM01350 177 467 4.0E-192 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 SUPERFAMILY SSF51735 4 175 7.43E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 Gene3D G3DSA:3.40.50.720 1 178 1.5E-57 T 11-10-2018 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 PIRSF PIRSF000109 1 467 5.3E-227 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 166 194 1.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 65 94 1.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 118 143 1.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.1E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 4.7E-225 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_01610 5383225df80b618229ec3224c7e1d7fe 467 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 UP17_15520 47742dd6765a443992c64decd530fd47 282 Gene3D G3DSA:1.10.101.10 27 108 3.1E-20 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_15520 47742dd6765a443992c64decd530fd47 282 Pfam PF01471 Putative peptidoglycan binding domain 43 98 1.6E-16 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_15520 47742dd6765a443992c64decd530fd47 282 Gene3D G3DSA:2.40.10.420 247 282 9.0E-21 T 11-10-2018 UP17_15520 47742dd6765a443992c64decd530fd47 282 Pfam PF07486 Cell Wall Hydrolase 183 281 4.4E-28 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 UP17_15520 47742dd6765a443992c64decd530fd47 282 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 31 282 1.9E-96 T 11-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 UP17_15520 47742dd6765a443992c64decd530fd47 282 Gene3D G3DSA:1.10.10.2520 167 246 8.0E-33 T 11-10-2018 UP17_15520 47742dd6765a443992c64decd530fd47 282 SUPERFAMILY SSF47090 33 99 2.94E-19 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_15875 32a20ca6609eaca7b38b30c2377b5927 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 126 8.3E-16 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_15875 32a20ca6609eaca7b38b30c2377b5927 143 SUPERFAMILY SSF54593 2 136 3.85E-29 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_15875 32a20ca6609eaca7b38b30c2377b5927 143 Gene3D G3DSA:3.10.180.10 1 143 3.4E-49 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_03620 2d2412226d2ab68174ad896528e36986 391 Gene3D G3DSA:3.90.1150.10 21 382 9.2E-117 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_03620 2d2412226d2ab68174ad896528e36986 391 Pfam PF00155 Aminotransferase class I and II 33 382 3.5E-52 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_03620 2d2412226d2ab68174ad896528e36986 391 Gene3D G3DSA:3.40.640.10 44 284 9.2E-117 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_03620 2d2412226d2ab68174ad896528e36986 391 SUPERFAMILY SSF53383 5 389 7.01E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_03620 2d2412226d2ab68174ad896528e36986 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 UP17_23520 a0a065ccd103bde3dbda99feff75ac6c 299 SUPERFAMILY SSF52540 12 160 4.89E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23520 a0a065ccd103bde3dbda99feff75ac6c 299 PIRSF PIRSF005052 9 294 1.9E-108 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 UP17_23520 a0a065ccd103bde3dbda99feff75ac6c 299 Pfam PF03668 P-loop ATPase protein family 10 291 3.5E-123 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 UP17_23520 a0a065ccd103bde3dbda99feff75ac6c 299 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 291 42.184 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 Gene3D G3DSA:1.10.8.60 225 314 2.7E-18 T 11-10-2018 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 Gene3D G3DSA:3.40.50.300 33 224 1.4E-56 T 11-10-2018 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 52 66 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 130 144 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 195 212 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 92 107 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 174 186 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 272 284 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 212 231 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 PRINTS PR00819 CbxX/CfqX superfamily signature 144 163 9.2E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 SUPERFAMILY SSF52540 47 309 9.41E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 50 310 6.2E-134 T 11-10-2018 IPR014232 Sporulation stage V, protein K UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 220 7.9E-19 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_08365 fcdc7c1d85a5bb665baf61c76a677d94 318 SMART SM00382 89 227 3.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_15330 c8d1581688ae78bfb76d5487acbeffa4 255 PIRSF PIRSF036636 1 255 1.4E-141 T 11-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 UP17_15330 c8d1581688ae78bfb76d5487acbeffa4 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 159 1.9E-10 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 UP17_15330 c8d1581688ae78bfb76d5487acbeffa4 255 SUPERFAMILY SSF81648 18 156 1.57E-29 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 UP17_15330 c8d1581688ae78bfb76d5487acbeffa4 255 Gene3D G3DSA:1.10.760.10 182 251 1.8E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 UP17_15330 c8d1581688ae78bfb76d5487acbeffa4 255 Gene3D G3DSA:1.20.810.10 13 171 3.7E-26 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 UP17_15330 c8d1581688ae78bfb76d5487acbeffa4 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 182 249 3.3E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_15330 c8d1581688ae78bfb76d5487acbeffa4 255 SUPERFAMILY SSF46626 136 253 5.38E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 Gene3D G3DSA:1.10.150.470 1 85 1.2E-25 T 11-10-2018 UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 Gene3D G3DSA:3.40.50.150 87 328 4.7E-56 T 11-10-2018 UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 SUPERFAMILY SSF53335 23 309 1.52E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 Pfam PF02384 N-6 DNA Methylase 95 310 1.2E-16 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 PIRSF PIRSF026567 1 328 2.7E-137 T 11-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 6.6E-9 T 11-10-2018 UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 93 109 6.6E-9 T 11-10-2018 UP17_18305 d6a0de11b8635ab98559cd8b9d3de1de 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 241 6.6E-9 T 11-10-2018 UP17_12355 a105c46cb92ba9a0a5760ec74d7b8dac 217 Gene3D G3DSA:1.10.3720.10 10 207 1.2E-34 T 11-10-2018 IPR035906 MetI-like superfamily UP17_12355 a105c46cb92ba9a0a5760ec74d7b8dac 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 207 1.7E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_12355 a105c46cb92ba9a0a5760ec74d7b8dac 217 SUPERFAMILY SSF161098 12 197 1.18E-40 T 11-10-2018 IPR035906 MetI-like superfamily UP17_01585 778583aaffdc0d9f368861e2136408c5 443 Pfam PF00854 POT family 95 203 4.0E-25 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 UP17_01585 778583aaffdc0d9f368861e2136408c5 443 Pfam PF00854 POT family 230 409 1.3E-35 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 UP17_01585 778583aaffdc0d9f368861e2136408c5 443 SUPERFAMILY SSF103473 9 437 1.44E-41 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_01585 778583aaffdc0d9f368861e2136408c5 443 Gene3D G3DSA:1.20.1250.20 7 222 8.3E-69 T 11-10-2018 UP17_01585 778583aaffdc0d9f368861e2136408c5 443 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 156 168 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 UP17_01585 778583aaffdc0d9f368861e2136408c5 443 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 223 1.0E-60 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 UP17_01585 778583aaffdc0d9f368861e2136408c5 443 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 228 442 2.0E-49 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 UP17_01585 778583aaffdc0d9f368861e2136408c5 443 Gene3D G3DSA:1.20.1250.20 223 443 2.5E-56 T 11-10-2018 UP17_01300 74f76687557a707115da6e9f88bb2d55 284 Gene3D G3DSA:1.10.357.10 1 170 4.4E-33 T 11-10-2018 UP17_01300 74f76687557a707115da6e9f88bb2d55 284 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site UP17_01300 74f76687557a707115da6e9f88bb2d55 284 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.3E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_01300 74f76687557a707115da6e9f88bb2d55 284 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.3E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_01300 74f76687557a707115da6e9f88bb2d55 284 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 3.5E-20 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_01300 74f76687557a707115da6e9f88bb2d55 284 SUPERFAMILY SSF46689 3 68 2.54E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_10640 48dfabf7bff17d9d298e8059c4b89f8d 47 Pfam PF08177 Small acid-soluble spore protein N family 1 46 6.9E-23 T 11-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 UP17_10640 48dfabf7bff17d9d298e8059c4b89f8d 47 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 1 47 17.874 T 11-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 279 3.3E-61 T 11-10-2018 IPR000150 Cof family GO:0016787 UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 11-10-2018 UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 279 2.8E-66 T 11-10-2018 UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 Gene3D G3DSA:3.30.1240.10 81 208 6.7E-86 T 11-10-2018 UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 252 2.0E-23 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 ProSitePatterns PS01229 Hypothetical cof family signature 2. 233 255 - T 11-10-2018 UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 SUPERFAMILY SSF56784 3 283 4.61E-66 T 11-10-2018 IPR036412 HAD-like superfamily UP17_10080 9a6809a1ae56103bb1017fdb10cde4af 290 Gene3D G3DSA:3.40.50.1000 4 276 6.7E-86 T 11-10-2018 IPR023214 HAD superfamily UP17_03145 4efb335aefd7b76c85dee07817540593 280 Pfam PF13276 HTH-like domain 35 88 2.4E-12 T 11-10-2018 IPR025948 HTH-like domain UP17_03145 4efb335aefd7b76c85dee07817540593 280 SUPERFAMILY SSF53098 110 272 3.95E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_03145 4efb335aefd7b76c85dee07817540593 280 Pfam PF00665 Integrase core domain 117 233 1.0E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_03145 4efb335aefd7b76c85dee07817540593 280 Gene3D G3DSA:3.30.420.10 112 274 5.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_08320 4efb335aefd7b76c85dee07817540593 280 Pfam PF13276 HTH-like domain 35 88 2.4E-12 T 11-10-2018 IPR025948 HTH-like domain UP17_08320 4efb335aefd7b76c85dee07817540593 280 SUPERFAMILY SSF53098 110 272 3.95E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_08320 4efb335aefd7b76c85dee07817540593 280 Pfam PF00665 Integrase core domain 117 233 1.0E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_08320 4efb335aefd7b76c85dee07817540593 280 Gene3D G3DSA:3.30.420.10 112 274 5.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_11340 4efb335aefd7b76c85dee07817540593 280 Pfam PF13276 HTH-like domain 35 88 2.4E-12 T 11-10-2018 IPR025948 HTH-like domain UP17_11340 4efb335aefd7b76c85dee07817540593 280 SUPERFAMILY SSF53098 110 272 3.95E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_11340 4efb335aefd7b76c85dee07817540593 280 Pfam PF00665 Integrase core domain 117 233 1.0E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_11340 4efb335aefd7b76c85dee07817540593 280 Gene3D G3DSA:3.30.420.10 112 274 5.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_08975 4efb335aefd7b76c85dee07817540593 280 Pfam PF13276 HTH-like domain 35 88 2.4E-12 T 11-10-2018 IPR025948 HTH-like domain UP17_08975 4efb335aefd7b76c85dee07817540593 280 SUPERFAMILY SSF53098 110 272 3.95E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_08975 4efb335aefd7b76c85dee07817540593 280 Pfam PF00665 Integrase core domain 117 233 1.0E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_08975 4efb335aefd7b76c85dee07817540593 280 Gene3D G3DSA:3.30.420.10 112 274 5.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 Pfam PF01642 Methylmalonyl-CoA mutase 41 553 6.2E-238 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 Gene3D G3DSA:3.20.20.240 40 555 5.5E-240 T 11-10-2018 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 592 721 4.5E-60 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 Pfam PF02310 B12 binding domain 595 705 2.2E-13 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 SUPERFAMILY SSF51703 13 555 3.4E-222 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 SUPERFAMILY SSF52242 559 722 5.49E-57 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 Gene3D G3DSA:3.40.50.280 559 722 5.5E-53 T 11-10-2018 UP17_12455 91ad125f5b1a016a6ece70d84be2d767 730 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 41 558 2.9E-270 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_24610 0ad3568439834023aafda722e22394ab 158 SUPERFAMILY SSF55729 42 146 3.9E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_24610 0ad3568439834023aafda722e22394ab 158 Gene3D G3DSA:3.40.630.30 4 158 2.5E-20 T 11-10-2018 UP17_24610 0ad3568439834023aafda722e22394ab 158 Pfam PF00583 Acetyltransferase (GNAT) family 39 137 1.6E-11 T 11-10-2018 IPR000182 GNAT domain UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Gene3D G3DSA:2.60.40.1710 663 814 5.6E-35 T 11-10-2018 UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 PRINTS PR00723 Subtilisin serine protease family (S8) signature 580 596 1.7E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 202 1.7E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 PRINTS PR00723 Subtilisin serine protease family (S8) signature 254 267 1.7E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 SUPERFAMILY SSF52025 422 603 1.23E-25 T 11-10-2018 UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Gene3D G3DSA:3.40.50.200 182 654 2.9E-162 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Pfam PF02225 PA domain 432 513 5.1E-16 T 11-10-2018 IPR003137 PA domain UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Pfam PF00082 Subtilase family 183 650 1.4E-57 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 581 591 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 258 268 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Pfam PF05922 Peptidase inhibitor I9 61 149 1.0E-6 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Gene3D G3DSA:2.60.40.10 1056 1148 5.9E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 188 199 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Pfam PF06280 Fn3-like domain 674 805 9.4E-29 T 11-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 SUPERFAMILY SSF52743 168 660 3.01E-64 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_23975 7c061370af5010f17e18124e515fc6e8 1243 Gene3D G3DSA:3.50.30.30 397 581 2.9E-162 T 11-10-2018 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 177 185 7.1E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 79 91 7.1E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 100 114 7.1E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 100 122 - T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 Pfam PF00246 Zinc carboxypeptidase 66 219 1.6E-19 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 SUPERFAMILY SSF53187 49 300 1.36E-35 T 11-10-2018 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 SMART SM00631 54 320 4.8E-8 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_14940 ee4081a6e8bb1a48b7aef4391978802a 361 Gene3D G3DSA:3.40.630.10 46 302 1.1E-33 T 11-10-2018 UP17_13305 379ae2fb0f258bd307731665e15f8978 198 Pfam PF01583 Adenylylsulphate kinase 27 179 6.4E-70 T 11-10-2018 UP17_13305 379ae2fb0f258bd307731665e15f8978 198 SUPERFAMILY SSF52540 18 195 1.81E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13305 379ae2fb0f258bd307731665e15f8978 198 Gene3D G3DSA:3.40.50.300 4 198 1.7E-77 T 11-10-2018 UP17_13305 379ae2fb0f258bd307731665e15f8978 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 197 38.821 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_13305 379ae2fb0f258bd307731665e15f8978 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 4.1E-82 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Gene3D G3DSA:1.10.8.60 618 707 1.6E-20 T 11-10-2018 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 526 544 1.0E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 497 515 1.0E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 559 573 1.0E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 452 470 1.0E-36 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Gene3D G3DSA:3.40.50.300 74 263 1.6E-65 T 11-10-2018 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 SUPERFAMILY SSF52540 397 687 1.33E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 126 254 2.6E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 618 689 6.0E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 SMART SM00382 121 264 1.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 SMART SM00382 448 619 1.7E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Gene3D G3DSA:4.10.860.10 327 378 1.2E-37 T 11-10-2018 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 482 500 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Pfam PF07724 AAA domain (Cdc48 subfamily) 447 612 2.1E-51 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 216 228 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 SUPERFAMILY SSF52540 83 349 1.1E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Gene3D G3DSA:3.40.50.300 401 616 1.7E-83 T 11-10-2018 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Pfam PF02151 UvrB/uvrC motif 335 369 5.6E-5 T 11-10-2018 IPR001943 UVR domain GO:0005515 UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 SMART SM01086 618 705 2.2E-22 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_12305 299ff0aaa054f4b32e9af00895d73238 709 Gene3D G3DSA:1.10.8.60 266 392 1.2E-37 T 11-10-2018 UP17_03265 6e9f1e43d41eceb5a27ced5a4e5bae94 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 7 506 2.6E-179 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_03265 6e9f1e43d41eceb5a27ced5a4e5bae94 511 SUPERFAMILY SSF48557 4 502 4.16E-163 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 UP17_03265 6e9f1e43d41eceb5a27ced5a4e5bae94 511 Pfam PF00221 Aromatic amino acid lyase 16 471 3.0E-168 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 UP17_03265 6e9f1e43d41eceb5a27ced5a4e5bae94 511 Gene3D G3DSA:1.20.200.10 198 508 1.9E-109 T 11-10-2018 UP17_03265 6e9f1e43d41eceb5a27ced5a4e5bae94 511 Gene3D G3DSA:1.10.275.10 1 197 1.4E-58 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal UP17_18685 1985c46f6f7f57a01eda4daee48dd075 367 SUPERFAMILY SSF53474 51 365 1.08E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_18685 1985c46f6f7f57a01eda4daee48dd075 367 Gene3D G3DSA:1.10.10.800 199 293 8.1E-112 T 11-10-2018 UP17_18685 1985c46f6f7f57a01eda4daee48dd075 367 Pfam PF01738 Dienelactone hydrolase family 84 203 3.4E-8 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 UP17_18685 1985c46f6f7f57a01eda4daee48dd075 367 Gene3D G3DSA:3.40.50.1820 64 348 8.1E-112 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_14845 11294eec9b41187f7bc52604ea1ac59e 471 PIRSF PIRSF006060 5 470 3.3E-80 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_14845 11294eec9b41187f7bc52604ea1ac59e 471 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_14845 11294eec9b41187f7bc52604ea1ac59e 471 Gene3D G3DSA:1.20.1740.10 9 470 8.2E-63 T 11-10-2018 UP17_14845 11294eec9b41187f7bc52604ea1ac59e 471 Pfam PF00324 Amino acid permease 19 440 3.2E-116 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_07500 c2ed5abaf1973cd75139f2d1c4c19b1d 402 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 370 1.8E-73 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 UP17_07500 c2ed5abaf1973cd75139f2d1c4c19b1d 402 Gene3D G3DSA:3.40.50.10300 189 402 6.1E-86 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 UP17_07500 c2ed5abaf1973cd75139f2d1c4c19b1d 402 SUPERFAMILY SSF102645 187 400 1.12E-77 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 UP17_07500 c2ed5abaf1973cd75139f2d1c4c19b1d 402 SUPERFAMILY SSF52507 3 180 1.31E-62 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 UP17_07500 c2ed5abaf1973cd75139f2d1c4c19b1d 402 Pfam PF02441 Flavoprotein 5 176 1.7E-48 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 UP17_07500 c2ed5abaf1973cd75139f2d1c4c19b1d 402 Gene3D G3DSA:3.40.50.1950 1 188 2.7E-62 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 UP17_07500 c2ed5abaf1973cd75139f2d1c4c19b1d 402 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 396 3.8E-153 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 UP17_02010 a7863559692704e4f5b833c77f7a4a62 88 Pfam PF11127 Protein of unknown function (DUF2892) 4 65 5.9E-9 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 UP17_19530 d12170b9c6613b640437d453efc85892 441 SUPERFAMILY SSF103473 6 439 1.44E-82 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_19530 d12170b9c6613b640437d453efc85892 441 PIRSF PIRSF002808 2 441 7.7E-42 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 UP17_19530 d12170b9c6613b640437d453efc85892 441 Gene3D G3DSA:1.20.1250.20 238 438 4.3E-34 T 11-10-2018 UP17_19530 d12170b9c6613b640437d453efc85892 441 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 21 431 1.3E-146 T 11-10-2018 UP17_19530 d12170b9c6613b640437d453efc85892 441 Gene3D G3DSA:1.20.1250.20 5 207 7.9E-47 T 11-10-2018 UP17_19530 d12170b9c6613b640437d453efc85892 441 Pfam PF07690 Major Facilitator Superfamily 19 396 7.4E-55 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_12250 3d67cc5de5c5e82f64899624652dce00 183 Gene3D G3DSA:1.10.443.10 6 181 2.5E-32 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_12250 3d67cc5de5c5e82f64899624652dce00 183 Pfam PF00589 Phage integrase family 18 168 4.4E-23 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_12250 3d67cc5de5c5e82f64899624652dce00 183 SUPERFAMILY SSF56349 4 177 1.47E-38 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_04700 589686cc8e24b14cbd24a2c2e29daade 106 Pfam PF13028 Protein of unknown function (DUF3889) 10 102 4.5E-22 T 11-10-2018 IPR024987 Protein of unknown function DUF3889 UP17_04700 589686cc8e24b14cbd24a2c2e29daade 106 Gene3D G3DSA:3.10.450.390 19 105 5.8E-13 T 11-10-2018 UP17_22075 f1dc3c9800027dc35fbf3e3b45fdee0d 192 Gene3D G3DSA:1.10.10.60 1 50 1.9E-16 T 11-10-2018 UP17_22075 f1dc3c9800027dc35fbf3e3b45fdee0d 192 Gene3D G3DSA:1.10.357.10 51 189 2.7E-12 T 11-10-2018 UP17_22075 f1dc3c9800027dc35fbf3e3b45fdee0d 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 51 9.0E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_22075 f1dc3c9800027dc35fbf3e3b45fdee0d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 7.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_22075 f1dc3c9800027dc35fbf3e3b45fdee0d 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 7.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_22075 f1dc3c9800027dc35fbf3e3b45fdee0d 192 SUPERFAMILY SSF46689 4 66 1.44E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_22075 f1dc3c9800027dc35fbf3e3b45fdee0d 192 SUPERFAMILY SSF48498 75 191 3.71E-7 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_04955 0b27789a71c32d653b3de877ad55cc66 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 UP17_04955 0b27789a71c32d653b3de877ad55cc66 258 Gene3D G3DSA:3.90.226.10 1 198 6.5E-68 T 11-10-2018 UP17_04955 0b27789a71c32d653b3de877ad55cc66 258 SUPERFAMILY SSF52096 2 257 5.98E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_04955 0b27789a71c32d653b3de877ad55cc66 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 257 2.7E-61 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_04955 0b27789a71c32d653b3de877ad55cc66 258 Gene3D G3DSA:1.10.12.10 199 258 2.9E-22 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal UP17_06995 94d28b93df46e717b3b86769dc5ef15d 319 Pfam PF03060 Nitronate monooxygenase 5 307 6.2E-59 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 UP17_06995 94d28b93df46e717b3b86769dc5ef15d 319 Gene3D G3DSA:3.20.20.70 2 318 3.6E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_06995 94d28b93df46e717b3b86769dc5ef15d 319 SUPERFAMILY SSF51412 3 314 1.53E-63 T 11-10-2018 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 SMART SM01086 361 455 3.7E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_07745 8df5a95e968cabc7c9884b7574450950 469 SUPERFAMILY SSF52540 7 467 8.74E-91 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07745 8df5a95e968cabc7c9884b7574450950 469 SMART SM00382 52 362 2.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Pfam PF07724 AAA domain (Cdc48 subfamily) 213 355 3.1E-41 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 469 2.4E-215 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 4 469 44.069 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Gene3D G3DSA:1.10.8.60 361 466 2.2E-40 T 11-10-2018 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Gene3D G3DSA:1.10.8.10 252 272 5.7E-25 T 11-10-2018 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 156 6.2E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Gene3D G3DSA:3.40.50.300 4 161 1.5E-34 T 11-10-2018 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Gene3D G3DSA:3.40.50.300 236 336 5.7E-25 T 11-10-2018 UP17_07745 8df5a95e968cabc7c9884b7574450950 469 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 361 432 9.5E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal UP17_15800 c6b5ce29c9e91849368a8de4230be7fb 392 SUPERFAMILY SSF47781 313 368 4.82E-5 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_15800 c6b5ce29c9e91849368a8de4230be7fb 392 Gene3D G3DSA:3.20.20.140 1 250 1.5E-17 T 11-10-2018 UP17_15800 c6b5ce29c9e91849368a8de4230be7fb 392 Pfam PF13263 PHP-associated 205 244 6.4E-5 T 11-10-2018 UP17_15800 c6b5ce29c9e91849368a8de4230be7fb 392 SUPERFAMILY SSF89550 2 247 1.04E-16 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 UP17_12750 10f82676000c41f8ad4f1cd5a76285fe 257 Gene3D G3DSA:3.30.420.10 92 246 3.3E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_12750 10f82676000c41f8ad4f1cd5a76285fe 257 Pfam PF00665 Integrase core domain 96 209 3.9E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_12750 10f82676000c41f8ad4f1cd5a76285fe 257 SUPERFAMILY SSF53098 90 253 2.73E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_12750 10f82676000c41f8ad4f1cd5a76285fe 257 Pfam PF13276 HTH-like domain 12 73 9.0E-13 T 11-10-2018 IPR025948 HTH-like domain UP17_11840 b4c650f36834051975778ef7a588e449 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 380 1.1E-99 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_11840 b4c650f36834051975778ef7a588e449 395 Gene3D G3DSA:3.40.630.10 16 377 1.0E-131 T 11-10-2018 UP17_11840 b4c650f36834051975778ef7a588e449 395 SUPERFAMILY SSF55031 188 299 4.97E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_11840 b4c650f36834051975778ef7a588e449 395 PIRSF PIRSF005962 1 393 3.0E-111 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_11840 b4c650f36834051975778ef7a588e449 395 SUPERFAMILY SSF53187 4 391 1.52E-78 T 11-10-2018 UP17_11840 b4c650f36834051975778ef7a588e449 395 Pfam PF07687 Peptidase dimerisation domain 185 281 1.1E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_11840 b4c650f36834051975778ef7a588e449 395 Gene3D G3DSA:3.30.70.360 184 298 1.0E-131 T 11-10-2018 UP17_11840 b4c650f36834051975778ef7a588e449 395 Pfam PF01546 Peptidase family M20/M25/M40 76 384 6.5E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_23300 e8d0dc8157d357ca6520cfdcc2cc747e 89 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 17 85 1.0E-5 T 11-10-2018 UP17_23300 e8d0dc8157d357ca6520cfdcc2cc747e 89 Pfam PF07293 Protein of unknown function (DUF1450) 15 88 3.3E-14 T 11-10-2018 IPR009910 Protein of unknown function DUF1450 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 276 4.8E-48 T 11-10-2018 IPR000150 Cof family GO:0016787 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 Gene3D G3DSA:3.40.50.1000 4 271 4.1E-55 T 11-10-2018 IPR023214 HAD superfamily UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 252 264 5.2E-5 T 11-10-2018 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 229 248 5.2E-5 T 11-10-2018 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 57 71 5.2E-5 T 11-10-2018 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 Gene3D G3DSA:3.30.1240.10 82 204 4.1E-55 T 11-10-2018 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 248 7.3E-25 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 276 4.3E-49 T 11-10-2018 UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 SUPERFAMILY SSF56784 1 280 3.78E-52 T 11-10-2018 IPR036412 HAD-like superfamily UP17_20460 6d81b68152014ac4c90416bb5b925ea4 281 ProSitePatterns PS01229 Hypothetical cof family signature 2. 229 251 - T 11-10-2018 UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 Pfam PF14306 PUA-like domain 6 154 9.9E-46 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 Pfam PF01747 ATP-sulfurylase 165 373 8.4E-94 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 Gene3D G3DSA:3.40.50.620 165 375 2.1E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 Gene3D G3DSA:3.10.400.10 22 158 4.6E-44 T 11-10-2018 UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 SUPERFAMILY SSF88697 5 159 6.76E-45 T 11-10-2018 IPR015947 PUA-like superfamily UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 6 373 6.1E-135 T 11-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 SUPERFAMILY SSF52374 162 373 1.03E-86 T 11-10-2018 UP17_12960 623194d5e9c8ef2c7da58c5c71356af6 382 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 21 377 49.912 T 11-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 UP17_09110 b6ca55b452183838f0cce1904bd65223 542 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_09110 b6ca55b452183838f0cce1904bd65223 542 SUPERFAMILY SSF52540 287 471 1.59E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09110 b6ca55b452183838f0cce1904bd65223 542 Gene3D G3DSA:3.40.50.300 2 79 1.1E-15 T 11-10-2018 UP17_09110 b6ca55b452183838f0cce1904bd65223 542 Pfam PF00005 ABC transporter 313 428 2.8E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_09110 b6ca55b452183838f0cce1904bd65223 542 Pfam PF00005 ABC transporter 91 125 1.9E-5 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_09110 b6ca55b452183838f0cce1904bd65223 542 SMART SM00382 312 473 2.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_09110 b6ca55b452183838f0cce1904bd65223 542 SMART SM00382 28 170 4.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_09110 b6ca55b452183838f0cce1904bd65223 542 SUPERFAMILY SSF52540 4 190 4.81E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09110 b6ca55b452183838f0cce1904bd65223 542 Gene3D G3DSA:3.40.50.300 251 499 1.7E-43 T 11-10-2018 UP17_09110 b6ca55b452183838f0cce1904bd65223 542 Gene3D G3DSA:3.40.50.300 80 207 5.6E-29 T 11-10-2018 UP17_09110 b6ca55b452183838f0cce1904bd65223 542 Pfam PF00005 ABC transporter 23 73 3.8E-8 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03755 ff41700a60dc928eb60ad50c08d999aa 61 Pfam PF14151 YfhD-like protein 1 59 9.9E-29 T 11-10-2018 IPR025435 YfhD-like protein UP17_03755 ff41700a60dc928eb60ad50c08d999aa 61 ProDom PD053407 YFHD 1 46 7.0E-11 T 11-10-2018 UP17_18400 1b596a46c25979b56d30e9d4794f66dc 382 Pfam PF00266 Aminotransferase class-V 2 362 1.7E-79 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_18400 1b596a46c25979b56d30e9d4794f66dc 382 Gene3D G3DSA:3.90.1150.10 2 370 3.8E-131 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_18400 1b596a46c25979b56d30e9d4794f66dc 382 Gene3D G3DSA:3.40.640.10 13 255 3.8E-131 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_18400 1b596a46c25979b56d30e9d4794f66dc 382 PIRSF PIRSF005572 1 378 1.3E-114 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 UP17_18400 1b596a46c25979b56d30e9d4794f66dc 382 SUPERFAMILY SSF53383 1 372 1.46E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_22750 fd72dbbed202e69e5e92b4e595f4bf20 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 11 237 1.4E-41 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 UP17_22750 fd72dbbed202e69e5e92b4e595f4bf20 249 SUPERFAMILY SSF51695 5 242 5.49E-72 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_22750 fd72dbbed202e69e5e92b4e595f4bf20 249 Gene3D G3DSA:3.20.20.190 1 245 4.7E-82 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_13155 3986965657f30b7158413aa488f85e5e 183 Gene3D G3DSA:3.40.630.30 11 180 6.8E-48 T 11-10-2018 UP17_13155 3986965657f30b7158413aa488f85e5e 183 SUPERFAMILY SSF55729 10 182 2.61E-50 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_13155 3986965657f30b7158413aa488f85e5e 183 Pfam PF13302 Acetyltransferase (GNAT) domain 17 156 4.7E-30 T 11-10-2018 IPR000182 GNAT domain UP17_25475 8b9c30b64c02736cc27dc74f17f8feac 496 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 225 239 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 UP17_25475 8b9c30b64c02736cc27dc74f17f8feac 496 SUPERFAMILY SSF53383 10 390 7.24E-94 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_25475 8b9c30b64c02736cc27dc74f17f8feac 496 Gene3D G3DSA:3.90.100.10 406 495 7.9E-17 T 11-10-2018 UP17_25475 8b9c30b64c02736cc27dc74f17f8feac 496 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 10 374 2.9E-91 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 UP17_25475 8b9c30b64c02736cc27dc74f17f8feac 496 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 414 474 5.9E-12 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 UP17_25475 8b9c30b64c02736cc27dc74f17f8feac 496 Gene3D G3DSA:3.40.640.10 10 287 2.8E-89 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_25475 8b9c30b64c02736cc27dc74f17f8feac 496 Gene3D G3DSA:3.90.1150.10 325 405 1.4E-5 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_22420 639b6d8d839797d8da48f8cf87487c05 234 Pfam PF00753 Metallo-beta-lactamase superfamily 18 210 1.7E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_22420 639b6d8d839797d8da48f8cf87487c05 234 Gene3D G3DSA:3.60.15.10 4 233 2.5E-34 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_22420 639b6d8d839797d8da48f8cf87487c05 234 SUPERFAMILY SSF56281 14 223 4.59E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_22420 639b6d8d839797d8da48f8cf87487c05 234 SMART SM00849 20 210 7.0E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_19095 547d764ac74a99e162eaca53c297b434 225 Pfam PF06161 Protein of unknown function (DUF975) 1 133 6.3E-12 T 11-10-2018 IPR010380 Protein of unknown function DUF975 UP17_19095 547d764ac74a99e162eaca53c297b434 225 Pfam PF06161 Protein of unknown function (DUF975) 125 211 1.2E-26 T 11-10-2018 IPR010380 Protein of unknown function DUF975 UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 SMART SM00924 32 135 2.1E-26 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 Pfam PF01769 Divalent cation transporter 319 440 7.3E-30 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 SUPERFAMILY SSF54631 134 264 4.93E-31 T 11-10-2018 UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 Gene3D G3DSA:1.25.60.10 3 130 1.7E-22 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 SMART SM00116 206 254 8.5E-8 T 11-10-2018 IPR000644 CBS domain UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 SMART SM00116 142 195 0.074 T 11-10-2018 IPR000644 CBS domain UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 SUPERFAMILY SSF158791 10 132 2.88E-27 T 11-10-2018 UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 Gene3D G3DSA:1.10.357.20 272 447 2.4E-59 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 SUPERFAMILY SSF161093 280 447 1.44E-52 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 Pfam PF00571 CBS domain 135 191 5.9E-7 T 11-10-2018 IPR000644 CBS domain UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 Pfam PF00571 CBS domain 199 253 1.0E-8 T 11-10-2018 IPR000644 CBS domain UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 Pfam PF03448 MgtE intracellular N domain 32 133 2.7E-21 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 5 448 1.2E-163 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 UP17_04375 2d82afe14f3f8e7ff0b3c9a9308e61a3 451 Gene3D G3DSA:3.10.580.10 132 258 3.6E-43 T 11-10-2018 UP17_03180 d769a83370f4481bc28827d5626e5a4e 216 SUPERFAMILY SSF46689 27 92 7.18E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_03180 d769a83370f4481bc28827d5626e5a4e 216 Pfam PF13305 WHG domain 106 191 3.6E-11 T 11-10-2018 IPR025996 WHG domain UP17_03180 d769a83370f4481bc28827d5626e5a4e 216 Gene3D G3DSA:1.10.357.10 20 212 2.2E-32 T 11-10-2018 UP17_03180 d769a83370f4481bc28827d5626e5a4e 216 SUPERFAMILY SSF48498 102 208 5.72E-17 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_03180 d769a83370f4481bc28827d5626e5a4e 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 78 2.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_19845 f97c3808cba99335b283754b8c021d63 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 69 264 3.4E-54 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 UP17_19845 f97c3808cba99335b283754b8c021d63 265 Gene3D G3DSA:3.90.850.10 35 265 4.6E-71 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_19845 f97c3808cba99335b283754b8c021d63 265 SUPERFAMILY SSF56529 61 264 1.16E-66 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_19845 f97c3808cba99335b283754b8c021d63 265 Pfam PF10370 Domain of unknown function (DUF2437) 9 62 1.3E-4 T 11-10-2018 IPR018833 Domain of unknown function DUF2437 UP17_10625 f0daa02e32496111137326965bca03b0 50 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 1 50 1.6E-23 T 11-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 UP17_10625 f0daa02e32496111137326965bca03b0 50 Pfam PF08175 Small acid-soluble spore protein O family 2 50 5.3E-24 T 11-10-2018 UP17_10625 f0daa02e32496111137326965bca03b0 50 Hamap MF_00665 Small, acid-soluble spore protein O [sspO]. 1 50 19.345 T 11-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 UP17_10625 f0daa02e32496111137326965bca03b0 50 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 3 33 2.0E-8 T 11-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 UP17_12930 f64c0191ce004c359a1606709ba62be7 204 SUPERFAMILY SSF75615 105 182 2.22E-14 T 11-10-2018 UP17_12930 f64c0191ce004c359a1606709ba62be7 204 Pfam PF13241 Putative NAD(P)-binding 4 112 9.0E-24 T 11-10-2018 UP17_12930 f64c0191ce004c359a1606709ba62be7 204 Gene3D G3DSA:3.40.50.720 1 127 1.1E-37 T 11-10-2018 UP17_12930 f64c0191ce004c359a1606709ba62be7 204 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 185 9.5E-32 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_12930 f64c0191ce004c359a1606709ba62be7 204 Pfam PF14824 Sirohaem biosynthesis protein central 116 140 6.9E-10 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_12930 f64c0191ce004c359a1606709ba62be7 204 SUPERFAMILY SSF51735 1 108 1.97E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_12930 f64c0191ce004c359a1606709ba62be7 204 Gene3D G3DSA:1.10.8.610 128 200 2.6E-22 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 SUPERFAMILY SSF54211 259 461 5.69E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 PRINTS PR01874 DNA repair protein radA signature 326 349 9.4E-94 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 PRINTS PR01874 DNA repair protein radA signature 86 114 9.4E-94 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 PRINTS PR01874 DNA repair protein radA signature 178 202 9.4E-94 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 PRINTS PR01874 DNA repair protein radA signature 128 145 9.4E-94 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 PRINTS PR01874 DNA repair protein radA signature 252 278 9.4E-94 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 PRINTS PR01874 DNA repair protein radA signature 217 245 9.4E-94 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 PRINTS PR01874 DNA repair protein radA signature 11 35 9.4E-94 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 Gene3D G3DSA:3.30.230.10 294 462 1.7E-21 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 Hamap MF_01498 DNA repair protein RadA [radA]. 22 460 44.982 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 Gene3D G3DSA:3.40.50.300 66 293 2.1E-45 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 SUPERFAMILY SSF52540 71 296 4.08E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 SMART SM00382 94 248 6.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 4 456 1.5E-215 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 370 434 3.7E-9 T 11-10-2018 UP17_00550 706c60dc9dd77280945d8d91782b62a7 462 Pfam PF13481 AAA domain 77 226 2.1E-18 T 11-10-2018 UP17_05955 10c7d5ae2a83de97ab478c8c1d151d9e 311 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 309 1.1E-135 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_05955 10c7d5ae2a83de97ab478c8c1d151d9e 311 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 309 73.08 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_05955 10c7d5ae2a83de97ab478c8c1d151d9e 311 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 1.6E-31 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_05955 10c7d5ae2a83de97ab478c8c1d151d9e 311 Gene3D G3DSA:3.40.47.10 1 311 9.6E-136 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_05955 10c7d5ae2a83de97ab478c8c1d151d9e 311 SUPERFAMILY SSF53901 3 309 2.81E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_05955 10c7d5ae2a83de97ab478c8c1d151d9e 311 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 220 309 2.0E-36 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 SUPERFAMILY SSF52833 1 158 1.26E-61 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 PIRSF PIRSF000303 1 158 7.4E-68 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 Pfam PF00255 Glutathione peroxidase 3 109 3.1E-42 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 1.6E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.6E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.6E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 UP17_14440 2d13ba8401e370a9524c35d2af4cc81a 158 Gene3D G3DSA:3.40.30.10 1 158 1.7E-69 T 11-10-2018 UP17_10555 f359f6475602f9b457b5f1ea6dd1890c 278 Gene3D G3DSA:3.40.50.1820 5 277 8.3E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_10555 f359f6475602f9b457b5f1ea6dd1890c 278 SUPERFAMILY SSF53474 7 277 2.45E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_10555 f359f6475602f9b457b5f1ea6dd1890c 278 Pfam PF00561 alpha/beta hydrolase fold 44 262 2.9E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10555 f359f6475602f9b457b5f1ea6dd1890c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 222 236 9.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10555 f359f6475602f9b457b5f1ea6dd1890c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 9.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10555 f359f6475602f9b457b5f1ea6dd1890c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 114 127 9.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_10555 f359f6475602f9b457b5f1ea6dd1890c 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 9.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_05560 e30992f0b06fdf1562b6b7841f73cbee 108 ProDom PD073069 YHAI 3D-STRUCTURE 11 101 2.0E-11 T 11-10-2018 IPR015058 Protein of unknown function DUF1878 UP17_05560 e30992f0b06fdf1562b6b7841f73cbee 108 Pfam PF08963 Protein of unknown function (DUF1878) 1 106 2.5E-26 T 11-10-2018 IPR015058 Protein of unknown function DUF1878 UP17_05560 e30992f0b06fdf1562b6b7841f73cbee 108 Gene3D G3DSA:1.10.3750.10 1 108 6.5E-35 T 11-10-2018 IPR035945 YhaI-like superfamily UP17_05560 e30992f0b06fdf1562b6b7841f73cbee 108 SUPERFAMILY SSF109915 3 105 2.48E-23 T 11-10-2018 IPR035945 YhaI-like superfamily UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 Gene3D G3DSA:3.40.50.280 10 136 8.4E-12 T 11-10-2018 UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 SUPERFAMILY SSF102114 173 379 6.41E-37 T 11-10-2018 UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 SUPERFAMILY SSF52242 42 124 2.82E-6 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 Pfam PF13311 Protein of unknown function (DUF4080) 372 559 1.3E-46 T 11-10-2018 IPR025288 Domain of unknown function DUF4080 UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 Gene3D G3DSA:3.80.30.20 174 372 1.7E-18 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 Pfam PF04055 Radical SAM superfamily 180 344 1.3E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 SMART SM00729 176 379 7.7E-21 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_06710 f5caa3eba88a8985c37783669ffb30f6 586 Pfam PF02310 B12 binding domain 9 122 6.0E-19 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_07115 332fabc0d118e90a9c2ff4c88d194c56 312 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 28 311 18.359 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 UP17_07115 332fabc0d118e90a9c2ff4c88d194c56 312 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 30 309 5.1E-96 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 UP17_07115 332fabc0d118e90a9c2ff4c88d194c56 312 Gene3D G3DSA:1.10.357.140 40 197 5.5E-18 T 11-10-2018 UP17_07115 332fabc0d118e90a9c2ff4c88d194c56 312 Pfam PF01040 UbiA prenyltransferase family 46 295 4.2E-60 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 UP17_07115 332fabc0d118e90a9c2ff4c88d194c56 312 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 88 110 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site UP17_18925 3867ad31533f6e2425263c4b3a19a500 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 518 2.5E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 UP17_18925 3867ad31533f6e2425263c4b3a19a500 565 Pfam PF00672 HAMP domain 209 257 5.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_18925 3867ad31533f6e2425263c4b3a19a500 565 Gene3D G3DSA:1.10.287.950 245 564 1.7E-69 T 11-10-2018 UP17_18925 3867ad31533f6e2425263c4b3a19a500 565 SMART SM00283 289 564 5.0E-79 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 UP17_18925 3867ad31533f6e2425263c4b3a19a500 565 SMART SM00304 207 260 3.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_18925 3867ad31533f6e2425263c4b3a19a500 565 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 162 1.1E-6 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain UP17_18925 3867ad31533f6e2425263c4b3a19a500 565 SUPERFAMILY SSF58104 233 563 8.89E-67 T 11-10-2018 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 PIRSF PIRSF001491 6 395 1.0E-167 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 SUPERFAMILY SSF53649 7 392 1.57E-79 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 TIGRFAM TIGR01696 deoB: phosphopentomutase 9 388 2.9E-197 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 Gene3D G3DSA:3.40.720.10 8 391 1.1E-175 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 Hamap MF_00740 Phosphopentomutase [deoB]. 7 391 55.43 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 Gene3D G3DSA:3.30.70.1250 102 220 1.1E-175 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 SUPERFAMILY SSF143856 104 220 2.35E-50 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 UP17_15770 1ad08b931f6abba95e6406cc83f40db5 395 Pfam PF01676 Metalloenzyme superfamily 8 382 5.2E-46 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 UP17_21205 3c8ac1f6c161c47b69623335a7cbdc2f 246 Gene3D G3DSA:3.60.15.10 6 246 1.0E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_21205 3c8ac1f6c161c47b69623335a7cbdc2f 246 SMART SM00849 22 227 2.6E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_21205 3c8ac1f6c161c47b69623335a7cbdc2f 246 SUPERFAMILY SSF56281 20 246 4.46E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_21205 3c8ac1f6c161c47b69623335a7cbdc2f 246 Pfam PF00753 Metallo-beta-lactamase superfamily 26 217 5.3E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_14865 623ce508da4336ffc34d6966a5edfdb8 537 SUPERFAMILY SSF53187 10 524 1.94E-24 T 11-10-2018 UP17_14865 623ce508da4336ffc34d6966a5edfdb8 537 Pfam PF01546 Peptidase family M20/M25/M40 82 330 2.7E-10 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_14865 623ce508da4336ffc34d6966a5edfdb8 537 PIRSF PIRSF010386 1 535 4.6E-193 T 11-10-2018 IPR012166 Uncharacterised protein family RocB UP17_14865 623ce508da4336ffc34d6966a5edfdb8 537 Gene3D G3DSA:3.40.630.10 9 237 5.0E-28 T 11-10-2018 UP17_21820 3969ae67ab4862c0e251c765c96d457d 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 209 24.139 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 UP17_21820 3969ae67ab4862c0e251c765c96d457d 235 PIRSF PIRSF006755 1 228 1.2E-49 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 UP17_21820 3969ae67ab4862c0e251c765c96d457d 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 174 2.9E-35 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 UP17_21820 3969ae67ab4862c0e251c765c96d457d 235 SUPERFAMILY SSF52540 1 221 1.47E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_21820 3969ae67ab4862c0e251c765c96d457d 235 Pfam PF13500 AAA domain 3 209 1.0E-34 T 11-10-2018 UP17_21820 3969ae67ab4862c0e251c765c96d457d 235 Gene3D G3DSA:3.40.50.300 3 217 1.4E-51 T 11-10-2018 UP17_07945 55610e8747f31cff345904626fe8b87f 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 201 218 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 UP17_07945 55610e8747f31cff345904626fe8b87f 257 SUPERFAMILY SSF64005 27 250 7.06E-88 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 UP17_07945 55610e8747f31cff345904626fe8b87f 257 Gene3D G3DSA:3.40.1180.10 11 257 1.8E-100 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 UP17_07945 55610e8747f31cff345904626fe8b87f 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 29 256 40.145 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 UP17_07945 55610e8747f31cff345904626fe8b87f 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 36 255 1.6E-85 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 UP17_07945 55610e8747f31cff345904626fe8b87f 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 29 255 2.4E-88 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 UP17_12760 02b0d0d32023e6b202660c19939a44d0 157 SUPERFAMILY SSF55811 18 148 1.9E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_12760 02b0d0d32023e6b202660c19939a44d0 157 Pfam PF00293 NUDIX domain 19 143 1.6E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_12760 02b0d0d32023e6b202660c19939a44d0 157 Gene3D G3DSA:3.90.79.10 1 146 7.9E-30 T 11-10-2018 UP17_12760 02b0d0d32023e6b202660c19939a44d0 157 PRINTS PR00502 NUDIX hydrolase family signature 55 70 3.1E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_12760 02b0d0d32023e6b202660c19939a44d0 157 PRINTS PR00502 NUDIX hydrolase family signature 41 55 3.1E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 9.3E-62 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 PIRSF PIRSF000447 1 411 1.2E-174 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 SUPERFAMILY SSF53901 213 410 6.64E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 367 1.6E-35 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 Gene3D G3DSA:3.40.47.10 255 399 6.5E-50 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 SMART SM00825 Beta-ketoacyl synthase 4 411 1.6E-14 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 408 1.6E-179 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 Gene3D G3DSA:3.40.47.10 1 253 7.9E-92 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19760 fd6a7e6da6203315833bf2c1c43d1351 411 SUPERFAMILY SSF53901 1 249 2.39E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_16210 f6c8f197d09709cf4e75a1ae8b251ecb 127 Gene3D G3DSA:3.40.250.10 27 126 4.8E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_16210 f6c8f197d09709cf4e75a1ae8b251ecb 127 Pfam PF00581 Rhodanese-like domain 38 120 8.3E-16 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_16210 f6c8f197d09709cf4e75a1ae8b251ecb 127 SMART SM00450 30 125 2.1E-21 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_16210 f6c8f197d09709cf4e75a1ae8b251ecb 127 SUPERFAMILY SSF52821 9 120 1.44E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_03230 f337aa42408bd216dfb8e7ffbabbb7d0 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 4.9E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_03230 f337aa42408bd216dfb8e7ffbabbb7d0 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_03230 f337aa42408bd216dfb8e7ffbabbb7d0 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 3.4E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_03230 f337aa42408bd216dfb8e7ffbabbb7d0 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 3.4E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_03230 f337aa42408bd216dfb8e7ffbabbb7d0 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 3.4E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_03230 f337aa42408bd216dfb8e7ffbabbb7d0 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 1.6E-128 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_03230 f337aa42408bd216dfb8e7ffbabbb7d0 420 SUPERFAMILY SSF56672 5 347 2.57E-56 T 11-10-2018 UP17_23880 3b3ea5f9191fcf0f0fc83abdfa8e179c 387 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 24 387 1.7E-81 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 UP17_23880 3b3ea5f9191fcf0f0fc83abdfa8e179c 387 Gene3D G3DSA:3.40.50.11820 34 379 3.6E-71 T 11-10-2018 UP17_23880 3b3ea5f9191fcf0f0fc83abdfa8e179c 387 SUPERFAMILY SSF53756 44 385 5.81E-20 T 11-10-2018 UP17_23880 3b3ea5f9191fcf0f0fc83abdfa8e179c 387 Gene3D G3DSA:3.40.50.12580 199 373 3.6E-71 T 11-10-2018 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 Pfam PF01175 Urocanase Rossmann-like domain 137 345 8.8E-90 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 550 6.2E-299 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 Hamap MF_00577 Urocanate hydratase [hutU]. 5 552 50.671 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 SUPERFAMILY SSF111326 7 552 3.53E-259 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 Pfam PF17392 Urocanase C-terminal domain 348 542 4.0E-95 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 Gene3D G3DSA:3.40.50.10730 138 345 2.2E-257 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 Gene3D G3DSA:3.40.1770.10 16 538 2.2E-257 T 11-10-2018 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 Pfam PF17391 Urocanase N-terminal domain 11 134 1.2E-61 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_09870 11e64371b78a1f85ffdc989aa705255a 558 PIRSF PIRSF001423 1 557 2.7E-296 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_04770 76fc1da5041580f3e73c8d45d93451f7 401 Pfam PF00149 Calcineurin-like phosphoesterase 60 317 2.2E-18 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_04770 76fc1da5041580f3e73c8d45d93451f7 401 SUPERFAMILY SSF56300 57 365 2.42E-39 T 11-10-2018 UP17_04770 76fc1da5041580f3e73c8d45d93451f7 401 Gene3D G3DSA:3.60.21.10 58 368 2.1E-16 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_16985 a5c5a6be4f7f166ebbe4f6d908e3d03d 226 Gene3D G3DSA:3.40.50.150 4 226 2.0E-67 T 11-10-2018 UP17_16985 a5c5a6be4f7f166ebbe4f6d908e3d03d 226 Pfam PF01596 O-methyltransferase 16 217 1.6E-33 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 UP17_16985 a5c5a6be4f7f166ebbe4f6d908e3d03d 226 SUPERFAMILY SSF53335 9 219 4.41E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_02115 e0d359c2988a716c3c9c5e3c9a482a09 159 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 14 153 1.0E-61 T 11-10-2018 IPR014203 Sporulation stage V, protein AC UP17_02115 e0d359c2988a716c3c9c5e3c9a482a09 159 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 32 149 2.1E-38 T 11-10-2018 IPR005562 SpoVA UP17_10885 15cda36143bfbdeb6363671eec3a6c59 60 Pfam PF14178 YppF-like protein 2 57 1.3E-14 T 11-10-2018 IPR025553 YppF-like protein UP17_01415 50409e7dd66e1e4d102cdc8b474979ab 157 Gene3D G3DSA:3.30.565.10 6 154 1.4E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01415 50409e7dd66e1e4d102cdc8b474979ab 157 Pfam PF13581 Histidine kinase-like ATPase domain 12 141 1.5E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_01415 50409e7dd66e1e4d102cdc8b474979ab 157 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 157 39.394 T 11-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 UP17_01415 50409e7dd66e1e4d102cdc8b474979ab 157 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 153 2.7E-70 T 11-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 UP17_01415 50409e7dd66e1e4d102cdc8b474979ab 157 SUPERFAMILY SSF55874 34 136 2.41E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_16690 2766eee494114155f0f6eb603a988d1c 158 Gene3D G3DSA:3.40.390.30 1 157 2.7E-46 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 UP17_16690 2766eee494114155f0f6eb603a988d1c 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 156 24.176 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 UP17_16690 2766eee494114155f0f6eb603a988d1c 158 SUPERFAMILY SSF55486 3 156 1.22E-44 T 11-10-2018 UP17_16690 2766eee494114155f0f6eb603a988d1c 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 153 2.8E-42 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 UP17_16690 2766eee494114155f0f6eb603a988d1c 158 Pfam PF02130 Uncharacterized protein family UPF0054 13 152 2.1E-48 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 UP17_16690 2766eee494114155f0f6eb603a988d1c 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site UP17_22575 626fd5928a6c58b713a97de8553f53c5 49 Gene3D G3DSA:2.20.28.120 1 49 1.6E-25 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_22575 626fd5928a6c58b713a97de8553f53c5 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.849 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_22575 626fd5928a6c58b713a97de8553f53c5 49 Pfam PF00471 Ribosomal protein L33 3 49 3.1E-24 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_22575 626fd5928a6c58b713a97de8553f53c5 49 SUPERFAMILY SSF57829 1 49 5.01E-20 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 UP17_22575 626fd5928a6c58b713a97de8553f53c5 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_22575 626fd5928a6c58b713a97de8553f53c5 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 3.1E-21 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_21595 d2fb6361b7af9474548b30619bae31af 136 Gene3D G3DSA:1.20.1550.10 2 108 6.2E-10 T 11-10-2018 IPR023380 DsbB-like superfamily UP17_21595 d2fb6361b7af9474548b30619bae31af 136 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 2 134 21.307 T 11-10-2018 IPR012187 Disulphide bond formation protein BdbC UP17_21595 d2fb6361b7af9474548b30619bae31af 136 SUPERFAMILY SSF158442 5 129 3.53E-29 T 11-10-2018 IPR023380 DsbB-like superfamily UP17_21595 d2fb6361b7af9474548b30619bae31af 136 Pfam PF02600 Disulfide bond formation protein DsbB 5 126 6.3E-11 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 UP17_21595 d2fb6361b7af9474548b30619bae31af 136 PIRSF PIRSF036659 1 135 2.7E-51 T 11-10-2018 IPR012187 Disulphide bond formation protein BdbC UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 Pfam PF00072 Response regulator receiver domain 6 116 9.6E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 SMART SM00862 154 229 5.4E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 Gene3D G3DSA:1.10.10.10 132 233 1.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 SUPERFAMILY SSF52172 2 128 2.99E-41 T 11-10-2018 IPR011006 CheY-like superfamily UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 SUPERFAMILY SSF46894 130 229 3.4E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 SMART SM00448 4 115 2.3E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 Gene3D G3DSA:3.40.50.2300 1 124 3.0E-37 T 11-10-2018 UP17_20315 256dc001ff4b964f787c00e7ff6b5670 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 2.6E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_23105 c4bd39119d3851a9edf311e78fd38ad0 100 SUPERFAMILY SSF102891 1 99 7.85E-31 T 11-10-2018 IPR036493 Hypothetical protein YunC superfamily UP17_23105 c4bd39119d3851a9edf311e78fd38ad0 100 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 1.9E-22 T 11-10-2018 IPR014931 Protein of unknown function DUF1805 UP17_23105 c4bd39119d3851a9edf311e78fd38ad0 100 Gene3D G3DSA:3.30.1980.10 1 100 2.6E-23 T 11-10-2018 IPR036493 Hypothetical protein YunC superfamily UP17_22010 5091720b0b2fc64934e5f243269e17ef 322 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 313 1.4E-133 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 UP17_22010 5091720b0b2fc64934e5f243269e17ef 322 Pfam PF16199 Radical_SAM C-terminal domain 220 303 4.3E-24 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 UP17_22010 5091720b0b2fc64934e5f243269e17ef 322 SMART SM00729 32 259 1.0E-42 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_22010 5091720b0b2fc64934e5f243269e17ef 322 Pfam PF04055 Radical SAM superfamily 52 214 9.4E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_22010 5091720b0b2fc64934e5f243269e17ef 322 Gene3D G3DSA:3.80.30.20 50 246 1.2E-13 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe UP17_22010 5091720b0b2fc64934e5f243269e17ef 322 SUPERFAMILY SSF102114 7 314 3.14E-55 T 11-10-2018 UP17_04915 957c4d9d0f72e274380026e5a94b41b8 266 PIRSF PIRSF037834 1 266 1.2E-84 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UP17_04915 957c4d9d0f72e274380026e5a94b41b8 266 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 18 266 1.6E-67 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UP17_04915 957c4d9d0f72e274380026e5a94b41b8 266 Pfam PF05138 Phenylacetic acid catabolic protein 10 266 9.2E-62 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UP17_04915 957c4d9d0f72e274380026e5a94b41b8 266 SUPERFAMILY SSF47240 12 259 6.08E-54 T 11-10-2018 IPR009078 Ferritin-like superfamily UP17_04915 957c4d9d0f72e274380026e5a94b41b8 266 Gene3D G3DSA:1.20.1260.10 2 266 3.0E-81 T 11-10-2018 IPR012347 Ferritin-like UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 345 4.4E-135 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 339 42.632 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 Gene3D G3DSA:3.30.360.10 146 313 3.2E-124 T 11-10-2018 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 143 159 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 140 3.4E-30 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 SUPERFAMILY SSF51735 2 168 1.98E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 SUPERFAMILY SSF55347 148 313 1.37E-53 T 11-10-2018 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 SMART SM00859 2 140 3.4E-46 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 157 316 1.1E-27 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_05860 daaf41b76ae1caa8667bc2af7fa937fe 345 Gene3D G3DSA:3.40.50.720 3 331 3.2E-124 T 11-10-2018 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 Gene3D G3DSA:3.40.50.720 10 95 4.4E-32 T 11-10-2018 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 Pfam PF08245 Mur ligase middle domain 117 291 1.9E-31 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 378 7.2E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 447 2.1E-131 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 Gene3D G3DSA:3.40.1190.10 102 308 1.1E-63 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 SUPERFAMILY SSF51984 10 100 5.89E-18 T 11-10-2018 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 SUPERFAMILY SSF53244 310 449 2.11E-41 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 Gene3D G3DSA:3.90.190.20 315 448 5.9E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 449 35.966 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_07310 721ce835c67b96dc7b78a8da9da3f77f 450 SUPERFAMILY SSF53623 103 308 6.67E-50 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 Gene3D G3DSA:3.40.50.720 1 254 1.0E-71 T 11-10-2018 UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 Pfam PF00106 short chain dehydrogenase 7 204 4.7E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 7.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 7.0E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 SUPERFAMILY SSF51735 4 250 1.35E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 5.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 5.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03735 e73fa4e4e5d11f59c79781de10f1d9f3 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 5.9E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_07865 1e690d7960de0a316af13ce3ae286645 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 353 9.3E-134 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UP17_07865 1e690d7960de0a316af13ce3ae286645 360 SUPERFAMILY SSF160544 250 357 1.44E-40 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal UP17_07865 1e690d7960de0a316af13ce3ae286645 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 308 329 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UP17_07865 1e690d7960de0a316af13ce3ae286645 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 234 251 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UP17_07865 1e690d7960de0a316af13ce3ae286645 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 16 38 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UP17_07865 1e690d7960de0a316af13ce3ae286645 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 214 232 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UP17_07865 1e690d7960de0a316af13ce3ae286645 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 278 293 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UP17_07865 1e690d7960de0a316af13ce3ae286645 360 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 14 359 7.8E-134 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 UP17_07865 1e690d7960de0a316af13ce3ae286645 360 Gene3D G3DSA:3.40.1690.10 224 360 1.0E-56 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal UP17_24510 7831b3044e797fd7d6fc20fe3b306aaa 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 252 3.5E-24 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_24510 7831b3044e797fd7d6fc20fe3b306aaa 288 Gene3D G3DSA:3.30.1240.10 82 208 2.9E-80 T 11-10-2018 UP17_24510 7831b3044e797fd7d6fc20fe3b306aaa 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 279 5.6E-57 T 11-10-2018 IPR000150 Cof family GO:0016787 UP17_24510 7831b3044e797fd7d6fc20fe3b306aaa 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 279 3.7E-63 T 11-10-2018 UP17_24510 7831b3044e797fd7d6fc20fe3b306aaa 288 Gene3D G3DSA:3.40.50.1000 3 276 2.9E-80 T 11-10-2018 IPR023214 HAD superfamily UP17_24510 7831b3044e797fd7d6fc20fe3b306aaa 288 SUPERFAMILY SSF56784 2 283 2.89E-60 T 11-10-2018 IPR036412 HAD-like superfamily UP17_24510 7831b3044e797fd7d6fc20fe3b306aaa 288 ProSitePatterns PS01229 Hypothetical cof family signature 2. 233 255 - T 11-10-2018 UP17_17315 55be952c9e6d59baca1100b051e91498 392 SUPERFAMILY SSF53822 38 386 7.07E-94 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_17315 55be952c9e6d59baca1100b051e91498 392 Gene3D G3DSA:3.40.50.2300 40 366 3.2E-106 T 11-10-2018 UP17_17315 55be952c9e6d59baca1100b051e91498 392 Gene3D G3DSA:3.40.50.2300 160 290 3.2E-106 T 11-10-2018 UP17_17315 55be952c9e6d59baca1100b051e91498 392 Pfam PF13458 Periplasmic binding protein 38 382 1.3E-66 T 11-10-2018 IPR028081 Leucine-binding protein domain UP17_01830 e1b9cd9faa58c303dc3619df369bfa16 79 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 3 78 2.1E-8 T 11-10-2018 IPR024962 YukD-like UP17_01830 e1b9cd9faa58c303dc3619df369bfa16 79 Gene3D G3DSA:3.10.20.90 1 79 3.3E-32 T 11-10-2018 UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 SMART SM00862 148 223 1.2E-13 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 Pfam PF00072 Response regulator receiver domain 5 113 7.2E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 SMART SM00448 2 112 5.9E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 Gene3D G3DSA:3.40.50.2300 2 125 2.3E-28 T 11-10-2018 UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 Gene3D G3DSA:1.10.10.10 126 229 4.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 SUPERFAMILY SSF46894 132 222 4.25E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 SUPERFAMILY SSF52172 3 125 2.85E-33 T 11-10-2018 IPR011006 CheY-like superfamily UP17_18735 4ae9c5de1a8377e6422ebecb43b0d23a 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 5.1E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_10060 de152a66618b5cf37f600ab60750b2d1 318 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 314 1.6E-92 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 UP17_10060 de152a66618b5cf37f600ab60750b2d1 318 Gene3D G3DSA:3.40.800.10 3 318 2.5E-102 T 11-10-2018 UP17_10060 de152a66618b5cf37f600ab60750b2d1 318 SUPERFAMILY SSF52768 9 316 6.84E-75 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_10060 de152a66618b5cf37f600ab60750b2d1 318 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 315 38.945 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 UP17_10060 de152a66618b5cf37f600ab60750b2d1 318 Pfam PF00491 Arginase family 47 314 1.7E-58 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_10060 de152a66618b5cf37f600ab60750b2d1 318 PIRSF PIRSF036979 20 318 8.8E-40 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_24420 b6b02f8d4d0d8ff1271255f6b800a436 328 Gene3D G3DSA:3.40.50.10950 18 319 2.4E-127 T 11-10-2018 UP17_24420 b6b02f8d4d0d8ff1271255f6b800a436 328 Gene3D G3DSA:3.40.50.10750 142 295 2.4E-127 T 11-10-2018 UP17_24420 b6b02f8d4d0d8ff1271255f6b800a436 328 Pfam PF01515 Phosphate acetyl/butaryl transferase 7 319 2.3E-120 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 UP17_24420 b6b02f8d4d0d8ff1271255f6b800a436 328 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 5.5E-119 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 UP17_24420 b6b02f8d4d0d8ff1271255f6b800a436 328 SUPERFAMILY SSF53659 6 321 1.27E-89 T 11-10-2018 UP17_24420 b6b02f8d4d0d8ff1271255f6b800a436 328 PIRSF PIRSF000428 1 323 3.0E-104 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 UP17_07595 b884ce6dadb903e05b1c961c49478fee 329 Gene3D G3DSA:3.40.718.10 1 329 6.2E-138 T 11-10-2018 UP17_07595 b884ce6dadb903e05b1c961c49478fee 329 PIRSF PIRSF002465 1 329 1.3E-128 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UP17_07595 b884ce6dadb903e05b1c961c49478fee 329 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 329 152.087 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UP17_07595 b884ce6dadb903e05b1c961c49478fee 329 Pfam PF02504 Fatty acid synthesis protein 1 319 3.0E-121 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UP17_07595 b884ce6dadb903e05b1c961c49478fee 329 SUPERFAMILY SSF53659 1 325 7.81E-107 T 11-10-2018 UP17_07595 b884ce6dadb903e05b1c961c49478fee 329 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 328 1.3E-131 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UP17_20360 3818dac0d8b9bd02a576caf64d40711e 204 SUPERFAMILY SSF48317 3 174 6.15E-33 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily UP17_20360 3818dac0d8b9bd02a576caf64d40711e 204 Gene3D G3DSA:1.20.144.10 75 179 1.3E-20 T 11-10-2018 UP17_20360 3818dac0d8b9bd02a576caf64d40711e 204 SMART SM00014 60 166 7.7E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_20360 3818dac0d8b9bd02a576caf64d40711e 204 Pfam PF01569 PAP2 superfamily 90 171 3.8E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_18730 f2a7e778fd0fb0b7b42bf5bee8ba4b9d 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 1.1E-50 T 11-10-2018 IPR004624 PhnA protein UP17_18730 f2a7e778fd0fb0b7b42bf5bee8ba4b9d 112 Pfam PF03831 PhnA domain 45 112 3.1E-34 T 11-10-2018 IPR013988 PhnA protein, C-terminal UP17_18730 f2a7e778fd0fb0b7b42bf5bee8ba4b9d 112 Gene3D G3DSA:2.20.25.10 1 42 2.6E-18 T 11-10-2018 UP17_18730 f2a7e778fd0fb0b7b42bf5bee8ba4b9d 112 SUPERFAMILY SSF57783 3 37 1.87E-13 T 11-10-2018 UP17_18730 f2a7e778fd0fb0b7b42bf5bee8ba4b9d 112 SUPERFAMILY SSF82057 40 112 2.15E-29 T 11-10-2018 UP17_18730 f2a7e778fd0fb0b7b42bf5bee8ba4b9d 112 Gene3D G3DSA:2.30.30.40 43 112 1.1E-35 T 11-10-2018 UP17_18730 f2a7e778fd0fb0b7b42bf5bee8ba4b9d 112 Pfam PF08274 PhnA Zinc-Ribbon 4 32 1.9E-15 T 11-10-2018 IPR013987 PhnA protein, N-terminal UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 Gene3D G3DSA:3.90.226.10 2 256 1.4E-89 T 11-10-2018 UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 145 4.4E-5 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 192 203 4.4E-5 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 93 107 4.4E-5 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 SUPERFAMILY SSF52096 269 516 1.07E-86 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 SUPERFAMILY SSF52096 3 254 1.24E-74 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 Gene3D G3DSA:3.90.226.10 262 516 5.9E-90 T 11-10-2018 UP17_10235 ab52425700428a0c6b7874d2daa00abd 516 Pfam PF01039 Carboxyl transferase domain 29 514 6.0E-187 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 UP17_06295 74bbbaea945922630916fda5a0737ce5 373 SUPERFAMILY SSF51395 5 340 9.29E-99 T 11-10-2018 UP17_06295 74bbbaea945922630916fda5a0737ce5 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 337 4.1E-80 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 UP17_06295 74bbbaea945922630916fda5a0737ce5 373 Gene3D G3DSA:3.20.20.70 3 371 4.8E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_00770 0699dcc6f0596262811af47c159c22c3 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.547 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00770 0699dcc6f0596262811af47c159c22c3 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 1.6E-46 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00770 0699dcc6f0596262811af47c159c22c3 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 5.5E-51 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00770 0699dcc6f0596262811af47c159c22c3 120 SUPERFAMILY SSF53137 7 118 2.62E-54 T 11-10-2018 UP17_00770 0699dcc6f0596262811af47c159c22c3 120 Gene3D G3DSA:3.30.420.100 5 120 1.1E-46 T 11-10-2018 UP17_02015 128f1833f9952caac818e3bcf5566948 581 SUPERFAMILY SSF51338 23 369 1.3E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_02015 128f1833f9952caac818e3bcf5566948 581 Pfam PF13382 Adenine deaminase C-terminal domain 411 572 1.0E-37 T 11-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 UP17_02015 128f1833f9952caac818e3bcf5566948 581 SUPERFAMILY SSF51556 82 326 1.96E-10 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_02015 128f1833f9952caac818e3bcf5566948 581 Gene3D G3DSA:3.20.20.140 82 325 1.3E-79 T 11-10-2018 UP17_02015 128f1833f9952caac818e3bcf5566948 581 Pfam PF01979 Amidohydrolase family 78 362 2.7E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_02015 128f1833f9952caac818e3bcf5566948 581 Gene3D G3DSA:2.30.40.10 21 362 1.3E-79 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_17300 d2e920f69bc9279908874e238e257bbf 259 Pfam PF00005 ABC transporter 24 183 1.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_17300 d2e920f69bc9279908874e238e257bbf 259 Gene3D G3DSA:3.40.50.300 2 257 1.4E-64 T 11-10-2018 UP17_17300 d2e920f69bc9279908874e238e257bbf 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 255 1.9E-12 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal UP17_17300 d2e920f69bc9279908874e238e257bbf 259 SMART SM00382 32 232 1.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17300 d2e920f69bc9279908874e238e257bbf 259 SUPERFAMILY SSF52540 6 256 3.18E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07295 7df820f65fd6592055468c29893f4b57 640 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 556 8.0E-89 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_07295 7df820f65fd6592055468c29893f4b57 640 Gene3D G3DSA:3.90.1310.30 49 219 5.6E-49 T 11-10-2018 UP17_07295 7df820f65fd6592055468c29893f4b57 640 SUPERFAMILY SSF56601 170 568 5.29E-101 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_07295 7df820f65fd6592055468c29893f4b57 640 Gene3D G3DSA:3.30.450.330 221 560 1.1E-113 T 11-10-2018 UP17_07295 7df820f65fd6592055468c29893f4b57 640 Gene3D G3DSA:3.40.710.10 282 477 1.1E-113 T 11-10-2018 UP17_07295 7df820f65fd6592055468c29893f4b57 640 Pfam PF03793 PASTA domain 583 636 4.5E-9 T 11-10-2018 IPR005543 PASTA domain UP17_07295 7df820f65fd6592055468c29893f4b57 640 SUPERFAMILY SSF54184 583 636 3.14E-10 T 11-10-2018 UP17_07295 7df820f65fd6592055468c29893f4b57 640 Gene3D G3DSA:3.30.10.20 583 637 6.7E-7 T 11-10-2018 UP17_07295 7df820f65fd6592055468c29893f4b57 640 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 203 4.9E-24 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UP17_07295 7df820f65fd6592055468c29893f4b57 640 SMART SM00740 579 637 6.2E-12 T 11-10-2018 IPR005543 PASTA domain UP17_07295 7df820f65fd6592055468c29893f4b57 640 SUPERFAMILY SSF56519 51 219 9.16E-47 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 UP17_07295 7df820f65fd6592055468c29893f4b57 640 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 14 637 6.7E-265 T 11-10-2018 IPR011927 Stage V sporulation protein D UP17_14755 4ebc607e158c3f5332ec0d58d7d0e45a 361 Gene3D G3DSA:2.40.100.10 242 359 1.6E-41 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_14755 4ebc607e158c3f5332ec0d58d7d0e45a 361 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 358 8.5E-145 T 11-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic UP17_14755 4ebc607e158c3f5332ec0d58d7d0e45a 361 SUPERFAMILY SSF50891 245 358 4.93E-39 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_14755 4ebc607e158c3f5332ec0d58d7d0e45a 361 SUPERFAMILY SSF51445 1 242 2.42E-94 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_14755 4ebc607e158c3f5332ec0d58d7d0e45a 361 Gene3D G3DSA:3.20.20.70 2 241 4.3E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_01100 348eb923ee894795f797e62dc57f2150 677 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 6 513 3.2E-101 T 11-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 UP17_01100 348eb923ee894795f797e62dc57f2150 677 Pfam PF00999 Sodium/hydrogen exchanger family 6 412 4.3E-60 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 Gene3D G3DSA:3.40.50.620 1 174 1.4E-66 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 Pfam PF00764 Arginosuccinate synthase 8 392 1.3E-179 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 394 3.9E-175 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 SUPERFAMILY SSF52402 2 168 1.46E-47 T 11-10-2018 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 Gene3D G3DSA:3.90.1260.10 175 402 2.4E-92 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 397 54.446 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 SUPERFAMILY SSF69864 172 398 3.01E-93 T 11-10-2018 UP17_18280 f09449ecc65adb5eeb9814b874de0743 402 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 UP17_19740 83799b05ff191186a949b584dfaf8b99 315 Gene3D G3DSA:1.10.1040.10 189 312 5.4E-37 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_19740 83799b05ff191186a949b584dfaf8b99 315 Gene3D G3DSA:3.40.50.720 1 187 9.2E-62 T 11-10-2018 UP17_19740 83799b05ff191186a949b584dfaf8b99 315 SUPERFAMILY SSF51735 1 184 1.05E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_19740 83799b05ff191186a949b584dfaf8b99 315 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 182 4.3E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_19740 83799b05ff191186a949b584dfaf8b99 315 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 184 208 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_19740 83799b05ff191186a949b584dfaf8b99 315 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 285 1.5E-21 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 UP17_19740 83799b05ff191186a949b584dfaf8b99 315 SUPERFAMILY SSF48179 187 286 1.11E-23 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_19740 83799b05ff191186a949b584dfaf8b99 315 PIRSF PIRSF000105 1 314 4.2E-87 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 UP17_05680 414f726cced979ff3cfcf07f72c5be56 188 Pfam PF06338 ComK protein 10 158 3.2E-56 T 11-10-2018 IPR010461 Competence protein ComK GO:0030420 UP17_05680 414f726cced979ff3cfcf07f72c5be56 188 PIRSF PIRSF011560 5 186 2.4E-59 T 11-10-2018 IPR010461 Competence protein ComK GO:0030420 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 282 5.1E-99 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 Gene3D G3DSA:3.20.20.150 1 297 5.9E-102 T 11-10-2018 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 Pfam PF01261 Xylose isomerase-like TIM barrel 22 237 5.5E-36 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 SMART SM00518 3 285 5.3E-124 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 285 41.923 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 UP17_16595 0b9e97ac3c6a5008201181db3d326026 298 SUPERFAMILY SSF51658 2 293 5.89E-99 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Pfam PF11638 DnaA N-terminal domain 6 65 7.6E-17 T 11-10-2018 IPR024633 DnaA N-terminal domain UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 SUPERFAMILY SSF48295 344 447 1.57E-36 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 SMART SM00382 145 273 3.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Gene3D G3DSA:3.40.50.300 94 277 6.0E-55 T 11-10-2018 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Gene3D G3DSA:1.10.1750.10 348 448 1.0E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 448 34.929 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 146 166 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 178 192 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 271 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 407 426 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 210 224 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Gene3D G3DSA:1.10.8.60 279 347 3.3E-30 T 11-10-2018 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Gene3D G3DSA:3.30.300.180 1 81 3.6E-30 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 360 426 2.2E-30 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 SMART SM00760 357 426 1.9E-41 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 SUPERFAMILY SSF52540 114 325 4.93E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 447 3.6E-187 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 ProSitePatterns PS01008 DnaA protein signature. 407 426 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 UP17_00005 ad9610fb770bf9f69ab861ec50c8649e 449 Pfam PF00308 Bacterial dnaA protein 113 329 1.2E-106 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA UP17_17150 a5261472f3f28c323b7266744dd81b47 645 SUPERFAMILY SSF56235 1 226 4.63E-27 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_17150 a5261472f3f28c323b7266744dd81b47 645 Gene3D G3DSA:3.40.50.620 471 593 1.3E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_17150 a5261472f3f28c323b7266744dd81b47 645 SUPERFAMILY SSF52402 236 573 3.56E-25 T 11-10-2018 UP17_17150 a5261472f3f28c323b7266744dd81b47 645 Gene3D G3DSA:3.60.20.10 2 225 6.6E-32 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_17150 a5261472f3f28c323b7266744dd81b47 645 Gene3D G3DSA:3.40.50.620 231 422 2.4E-19 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_17150 a5261472f3f28c323b7266744dd81b47 645 Pfam PF00733 Asparagine synthase 245 565 2.1E-22 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 UP17_17150 a5261472f3f28c323b7266744dd81b47 645 Pfam PF13537 Glutamine amidotransferase domain 58 166 4.4E-20 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain UP17_17150 a5261472f3f28c323b7266744dd81b47 645 PIRSF PIRSF001589 1 382 3.1E-40 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 UP17_17150 a5261472f3f28c323b7266744dd81b47 645 PIRSF PIRSF001589 449 597 0.0044 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 UP17_05500 5778d57094a3bccc72ca296540524fb5 403 SUPERFAMILY SSF56300 5 277 2.53E-55 T 11-10-2018 UP17_05500 5778d57094a3bccc72ca296540524fb5 403 Gene3D G3DSA:3.60.21.10 3 251 1.3E-62 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_05500 5778d57094a3bccc72ca296540524fb5 403 PIRSF PIRSF033091 2 403 8.2E-129 T 11-10-2018 IPR014576 Predicted phosphoesterase, YhaO type UP17_05500 5778d57094a3bccc72ca296540524fb5 403 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 1.4E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 SUPERFAMILY SSF52540 151 465 2.62E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 Pfam PF03308 ArgK protein 168 424 1.5E-45 T 11-10-2018 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 Gene3D G3DSA:3.40.50.300 201 409 1.5E-60 T 11-10-2018 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 SUPERFAMILY SSF51703 505 1084 2.88E-150 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 12 125 5.1E-17 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 711 1087 8.7E-92 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 Pfam PF01642 Methylmalonyl-CoA mutase 564 1082 5.4E-141 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 Gene3D G3DSA:3.40.50.280 8 150 7.2E-61 T 11-10-2018 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 Gene3D G3DSA:3.20.20.240 489 1088 2.5E-185 T 11-10-2018 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 SUPERFAMILY SSF52242 6 145 1.96E-42 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 Pfam PF02310 B12 binding domain 14 116 3.8E-12 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_24310 402c4b8a6ef0215f3493d1328a5b1fdb 1088 Hamap MF_02050 Fused isobutyryl-CoA mutase [icmF]. 12 1088 17.0 T 11-10-2018 IPR033669 Fused isobutyryl-CoA mutase GO:0003924|GO:0005525|GO:0006637|GO:0031419|GO:0034784|GO:0047727 UP17_10935 cfc2471f25a37482cf0039841b472388 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 28 53 1.8E-42 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 58 73 1.8E-42 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 79 99 1.8E-42 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 100 120 1.8E-42 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 182 204 1.8E-42 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 143 169 1.8E-42 T 11-10-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0044237|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 Gene3D G3DSA:2.102.10.10 43 167 1.2E-142 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 Pfam PF00355 Rieske [2Fe-2S] domain 43 127 7.7E-22 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 163 422 5.3E-21 T 11-10-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0044237|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 SUPERFAMILY SSF50022 12 159 9.17E-45 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_10935 cfc2471f25a37482cf0039841b472388 423 SUPERFAMILY SSF55961 160 422 1.02E-54 T 11-10-2018 UP17_10935 cfc2471f25a37482cf0039841b472388 423 Gene3D G3DSA:3.90.380.10 26 421 1.2E-142 T 11-10-2018 UP17_10935 cfc2471f25a37482cf0039841b472388 423 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 86 109 - T 11-10-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0051537|GO:0055114 UP17_04560 9f750c176aa36ff7646c9875cfa13b36 348 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 345 1.7E-133 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 UP17_04560 9f750c176aa36ff7646c9875cfa13b36 348 Gene3D G3DSA:1.10.1610.10 10 337 2.5E-129 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 UP17_04560 9f750c176aa36ff7646c9875cfa13b36 348 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 347 36.19 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 UP17_04560 9f750c176aa36ff7646c9875cfa13b36 348 SUPERFAMILY SSF52733 8 347 1.06E-114 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 UP17_04560 9f750c176aa36ff7646c9875cfa13b36 348 Gene3D G3DSA:3.40.50.10210 56 328 2.5E-129 T 11-10-2018 UP17_04560 9f750c176aa36ff7646c9875cfa13b36 348 Pfam PF02277 Phosphoribosyltransferase 10 345 9.2E-131 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 UP17_17665 1ff9cf2b675a84d1cd4c89a9f5bb8fce 276 Pfam PF01578 Cytochrome C assembly protein 68 269 5.6E-28 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 UP17_21315 9271626297bca3c6ee85e6d40c792d5d 166 Gene3D G3DSA:1.20.120.450 1 164 3.2E-44 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_21315 9271626297bca3c6ee85e6d40c792d5d 166 SUPERFAMILY SSF109854 3 150 2.93E-31 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_21315 9271626297bca3c6ee85e6d40c792d5d 166 Pfam PF05163 DinB family 1 164 5.6E-39 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB UP17_20505 590626c334f1cddd467007a51db6a913 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_20505 590626c334f1cddd467007a51db6a913 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.0E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_20505 590626c334f1cddd467007a51db6a913 186 Gene3D G3DSA:1.10.357.10 1 185 2.3E-48 T 11-10-2018 UP17_20505 590626c334f1cddd467007a51db6a913 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 54 4.1E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_20505 590626c334f1cddd467007a51db6a913 186 SUPERFAMILY SSF48498 77 183 2.03E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_20505 590626c334f1cddd467007a51db6a913 186 SUPERFAMILY SSF46689 2 69 1.8E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_08470 99ea8ac4b6914affb6f9dc7289e72d3e 244 Pfam PF00005 ABC transporter 24 167 8.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_08470 99ea8ac4b6914affb6f9dc7289e72d3e 244 SUPERFAMILY SSF52540 4 233 2.83E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08470 99ea8ac4b6914affb6f9dc7289e72d3e 244 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_08470 99ea8ac4b6914affb6f9dc7289e72d3e 244 Gene3D G3DSA:3.40.50.300 1 244 6.0E-61 T 11-10-2018 UP17_08470 99ea8ac4b6914affb6f9dc7289e72d3e 244 SMART SM00382 31 215 4.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_09660 03bbfc18e1cbe0e9a651bc7577c78e2f 115 Gene3D G3DSA:1.20.58.1000 11 114 6.7E-30 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily UP17_09660 03bbfc18e1cbe0e9a651bc7577c78e2f 115 Pfam PF02583 Metal-sensitive transcriptional repressor 33 111 5.0E-27 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 UP17_07270 6dea85ee74eb489a168e749d501a99f1 143 SUPERFAMILY SSF89447 1 136 9.0E-51 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily UP17_07270 6dea85ee74eb489a168e749d501a99f1 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 3.9E-57 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 UP17_07270 6dea85ee74eb489a168e749d501a99f1 143 Gene3D G3DSA:2.40.330.20 1 141 2.2E-52 T 11-10-2018 IPR038619 MraZ superfamily UP17_07270 6dea85ee74eb489a168e749d501a99f1 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 9.0E-44 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 UP17_07270 6dea85ee74eb489a168e749d501a99f1 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 56.859 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 UP17_07270 6dea85ee74eb489a168e749d501a99f1 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 7.0E-22 T 11-10-2018 IPR020603 MraZ domain UP17_07270 6dea85ee74eb489a168e749d501a99f1 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 2.8E-22 T 11-10-2018 IPR020603 MraZ domain UP17_15950 1733e14aae682acb270bc9901179dbbd 329 Pfam PF06081 Aromatic acid exporter family member 1 2 142 1.7E-52 T 11-10-2018 IPR010343 Aromatic acid exporter family member 1 UP17_15950 1733e14aae682acb270bc9901179dbbd 329 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 309 1.8E-55 T 11-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal UP17_15950 1733e14aae682acb270bc9901179dbbd 329 Gene3D G3DSA:1.20.120.940 141 314 7.1E-55 T 11-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily UP17_19890 b06a8a69c5a7146dd5eed4ab80009e2e 65 Pfam PF01381 Helix-turn-helix 6 60 2.7E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19890 b06a8a69c5a7146dd5eed4ab80009e2e 65 Gene3D G3DSA:1.10.260.40 3 65 8.7E-24 T 11-10-2018 UP17_19890 b06a8a69c5a7146dd5eed4ab80009e2e 65 SMART SM00530 5 60 2.5E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19890 b06a8a69c5a7146dd5eed4ab80009e2e 65 SUPERFAMILY SSF47413 5 64 2.33E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_18890 a4016e73fcc1c7cc944c95594d220536 146 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 134 2.9E-13 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_18890 a4016e73fcc1c7cc944c95594d220536 146 Gene3D G3DSA:3.30.530.20 3 145 1.9E-30 T 11-10-2018 IPR023393 START-like domain superfamily UP17_18890 a4016e73fcc1c7cc944c95594d220536 146 SUPERFAMILY SSF55961 4 134 1.77E-21 T 11-10-2018 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 Gene3D G3DSA:3.40.50.150 6 178 8.5E-38 T 11-10-2018 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 SUPERFAMILY SSF53335 7 145 1.41E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 SUPERFAMILY SSF53335 355 580 1.83E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 Gene3D G3DSA:3.90.120.10 374 568 5.7E-37 T 11-10-2018 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 Pfam PF00145 C-5 cytosine-specific DNA methylase 8 146 3.3E-25 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 Pfam PF00145 C-5 cytosine-specific DNA methylase 360 580 2.3E-29 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 Gene3D G3DSA:3.40.50.150 360 573 5.7E-37 T 11-10-2018 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 9 25 3.1E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 128 142 3.1E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_20045 27eaec04b0dda808b99504d6ec82a405 604 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 561 579 - T 11-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 UP17_01365 b0aedbbe7fb75c31f9acf5d56c7c0f39 118 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 117 9.0E-31 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 UP17_01365 b0aedbbe7fb75c31f9acf5d56c7c0f39 118 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 24.792 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 UP17_01365 b0aedbbe7fb75c31f9acf5d56c7c0f39 118 Gene3D G3DSA:3.90.470.20 1 117 5.0E-38 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 UP17_01365 b0aedbbe7fb75c31f9acf5d56c7c0f39 118 SUPERFAMILY SSF56214 2 115 2.75E-34 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 UP17_01365 b0aedbbe7fb75c31f9acf5d56c7c0f39 118 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 116 5.4E-30 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 UP17_01365 b0aedbbe7fb75c31f9acf5d56c7c0f39 118 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 116 2.5E-37 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 UP17_01365 b0aedbbe7fb75c31f9acf5d56c7c0f39 118 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 111 2.7E-23 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 UP17_25360 d15ab58b6a15ae5af3977f75d92dd484 435 Pfam PF00145 C-5 cytosine-specific DNA methylase 7 413 1.3E-36 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_25360 d15ab58b6a15ae5af3977f75d92dd484 435 SUPERFAMILY SSF53335 6 414 8.86E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_25360 d15ab58b6a15ae5af3977f75d92dd484 435 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 3.5E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_25360 d15ab58b6a15ae5af3977f75d92dd484 435 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 175 188 3.5E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_25360 d15ab58b6a15ae5af3977f75d92dd484 435 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 123 137 3.5E-7 T 11-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 SMART SM00155 414 441 5.9E-7 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 SMART SM00155 237 264 2.1E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 SUPERFAMILY SSF56024 118 331 1.48E-49 T 11-10-2018 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 Gene3D G3DSA:3.30.870.10 334 477 9.6E-25 T 11-10-2018 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 SUPERFAMILY SSF56024 289 476 3.81E-42 T 11-10-2018 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 Pfam PF13091 PLD-like domain 343 467 1.2E-23 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 Pfam PF13091 PLD-like domain 154 277 2.0E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 Pfam PF13396 Phospholipase_D-nuclease N-terminal 40 82 3.5E-6 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 Hamap MF_01916 Cardiolipin synthase. 34 501 38.728 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 32 501 3.0E-143 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 UP17_12860 83c0ee45937e58c9ccdc8d791f55d21e 501 Gene3D G3DSA:3.30.870.10 132 333 2.7E-42 T 11-10-2018 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 458 6.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 SUPERFAMILY SSF158472 185 234 2.09E-12 T 11-10-2018 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 SMART SM00388 238 304 8.4E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 Pfam PF00672 HAMP domain 185 234 1.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 303 6.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 SMART SM00304 185 237 5.7E-14 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 SMART SM00387 348 459 6.8E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 SUPERFAMILY SSF47384 221 303 2.16E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 Gene3D G3DSA:1.10.8.500 184 233 1.7E-12 T 11-10-2018 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 7.6E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 7.6E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 7.6E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 7.6E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 Gene3D G3DSA:3.30.565.10 302 458 3.1E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 Gene3D G3DSA:1.10.287.130 234 301 2.0E-19 T 11-10-2018 UP17_02250 2704be331793bfcbbd9a47768b81b43f 459 SUPERFAMILY SSF55874 294 458 1.09E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_08445 902460e06f1d2a36a74532c4eb796a72 334 Pfam PF13222 Protein of unknown function (DUF4030) 217 330 5.3E-12 T 11-10-2018 IPR025108 Protein of unknown function DUF4030 UP17_22515 eacf2c2d79fd90271a7ede3790e42636 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_22515 eacf2c2d79fd90271a7ede3790e42636 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_22515 eacf2c2d79fd90271a7ede3790e42636 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 1.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_22515 eacf2c2d79fd90271a7ede3790e42636 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 1.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_22515 eacf2c2d79fd90271a7ede3790e42636 312 Gene3D G3DSA:3.40.50.720 1 305 2.0E-77 T 11-10-2018 UP17_22515 eacf2c2d79fd90271a7ede3790e42636 312 Pfam PF00106 short chain dehydrogenase 16 216 6.7E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_22515 eacf2c2d79fd90271a7ede3790e42636 312 SUPERFAMILY SSF51735 10 269 6.71E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 9.0E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 9.0E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 9.0E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 9.0E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 9.0E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 9.0E-66 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 4.0E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 4.0E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 4.0E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 4.0E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 4.0E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 4.0E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 Pfam PF00813 FliP family 25 217 6.5E-81 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 UP17_07850 e100ef02f4c0711ac9dc9a18b503025a 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 1.7E-90 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 UP17_23230 f02962f16dd2b3dc9ecd3f227f20ca57 483 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_23230 f02962f16dd2b3dc9ecd3f227f20ca57 483 Pfam PF00324 Amino acid permease 21 471 9.6E-139 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_23230 f02962f16dd2b3dc9ecd3f227f20ca57 483 Gene3D G3DSA:1.20.1740.10 12 478 6.8E-59 T 11-10-2018 UP17_23230 f02962f16dd2b3dc9ecd3f227f20ca57 483 PIRSF PIRSF006060 3 476 8.4E-86 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_12280 f7a643dfed628674aee31ee8d2c6cf16 300 Gene3D G3DSA:3.40.50.300 1 226 2.1E-37 T 11-10-2018 UP17_12280 f7a643dfed628674aee31ee8d2c6cf16 300 SMART SM00382 28 215 6.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12280 f7a643dfed628674aee31ee8d2c6cf16 300 Pfam PF00005 ABC transporter 19 156 2.6E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_12280 f7a643dfed628674aee31ee8d2c6cf16 300 SUPERFAMILY SSF52540 3 218 5.93E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 SUPERFAMILY SSF64288 73 233 1.22E-41 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 Pfam PF07702 UTRA domain 91 228 1.7E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 SMART SM00345 8 67 7.0E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 8.5E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 9.0E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 9.0E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 SMART SM00866 89 228 1.1E-28 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 Gene3D G3DSA:3.40.1410.10 76 231 6.9E-32 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 Gene3D G3DSA:1.10.10.10 3 69 7.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 3.9E-89 T 11-10-2018 IPR012770 Trehalose operon transcriptional repressor UP17_09225 8c604d85f2e776189b288a1ddaa937ca 237 SUPERFAMILY SSF46785 3 71 2.41E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03750 08da5e8ee2ee9f0a2ac3bf5ccadeed51 526 Pfam PF00501 AMP-binding enzyme 9 418 1.7E-100 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_03750 08da5e8ee2ee9f0a2ac3bf5ccadeed51 526 SUPERFAMILY SSF56801 4 515 5.36E-147 T 11-10-2018 UP17_03750 08da5e8ee2ee9f0a2ac3bf5ccadeed51 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 503 1.0E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_03750 08da5e8ee2ee9f0a2ac3bf5ccadeed51 526 Gene3D G3DSA:3.30.300.310 414 519 1.5E-32 T 11-10-2018 UP17_03750 08da5e8ee2ee9f0a2ac3bf5ccadeed51 526 Gene3D G3DSA:3.40.50.12780 1 411 1.1E-111 T 11-10-2018 UP17_03750 08da5e8ee2ee9f0a2ac3bf5ccadeed51 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_04865 356e85ae01f154e6ce06a14979e39b6e 420 PIRSF PIRSF000524 4 410 2.3E-131 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 UP17_04865 356e85ae01f154e6ce06a14979e39b6e 420 SUPERFAMILY SSF53383 9 388 2.48E-95 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_04865 356e85ae01f154e6ce06a14979e39b6e 420 Pfam PF00266 Aminotransferase class-V 36 357 5.6E-30 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_04865 356e85ae01f154e6ce06a14979e39b6e 420 Gene3D G3DSA:3.90.1150.10 9 386 1.7E-143 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_04865 356e85ae01f154e6ce06a14979e39b6e 420 Gene3D G3DSA:3.40.640.10 22 284 1.7E-143 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_01230 470eeb88dc5ebba9d6202a5a3b4a055e 123 Pfam PF13411 MerR HTH family regulatory protein 2 60 1.3E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_01230 470eeb88dc5ebba9d6202a5a3b4a055e 123 Gene3D G3DSA:1.10.1660.10 1 118 9.0E-20 T 11-10-2018 UP17_01230 470eeb88dc5ebba9d6202a5a3b4a055e 123 SUPERFAMILY SSF46955 2 94 5.86E-16 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_01230 470eeb88dc5ebba9d6202a5a3b4a055e 123 SMART SM00422 1 61 1.3E-9 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_15115 78d871488981b3eda164afc73fd75870 759 Gene3D G3DSA:3.40.50.300 26 250 1.7E-47 T 11-10-2018 UP17_15115 78d871488981b3eda164afc73fd75870 759 Pfam PF09369 Domain of unknown function (DUF1998) 654 733 1.8E-20 T 11-10-2018 IPR018973 DEAD/DEAH-box helicase, putative UP17_15115 78d871488981b3eda164afc73fd75870 759 Pfam PF00270 DEAD/DEAH box helicase 63 234 5.7E-27 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_15115 78d871488981b3eda164afc73fd75870 759 SMART SM00487 56 260 8.3E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_15115 78d871488981b3eda164afc73fd75870 759 SUPERFAMILY SSF52540 70 400 2.58E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15115 78d871488981b3eda164afc73fd75870 759 Gene3D G3DSA:3.40.50.300 271 426 5.1E-20 T 11-10-2018 UP17_15115 78d871488981b3eda164afc73fd75870 759 SMART SM00490 307 394 2.9E-13 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_15115 78d871488981b3eda164afc73fd75870 759 Pfam PF00271 Helicase conserved C-terminal domain 289 393 1.2E-12 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_13425 46165e55c84b624cdce8e55b310e6914 164 Pfam PF12867 DinB superfamily 24 148 4.8E-9 T 11-10-2018 IPR024775 DinB-like domain UP17_13425 46165e55c84b624cdce8e55b310e6914 164 Gene3D G3DSA:1.20.120.450 11 156 1.0E-14 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_13425 46165e55c84b624cdce8e55b310e6914 164 SUPERFAMILY SSF109854 1 158 1.1E-22 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 490 84.586 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 PIRSF PIRSF000110 1 492 6.3E-184 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 SUPERFAMILY SSF51735 8 192 9.05E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 Gene3D G3DSA:3.40.50.720 5 177 4.8E-57 T 11-10-2018 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 Gene3D G3DSA:3.30.360.10 178 491 1.1E-121 T 11-10-2018 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 2.8E-193 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 192 488 1.0E-112 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 189 3.9E-59 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 SUPERFAMILY SSF55347 184 489 3.6E-112 T 11-10-2018 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_15910 6231e68ee042fee6c9ed3be98e44538e 499 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 UP17_17460 b4b7a9eb642540c7716379363eeffcd5 318 SUPERFAMILY SSF56112 32 259 5.65E-18 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_17460 b4b7a9eb642540c7716379363eeffcd5 318 Gene3D G3DSA:3.90.1200.10 103 317 1.4E-11 T 11-10-2018 UP17_17460 b4b7a9eb642540c7716379363eeffcd5 318 Pfam PF01636 Phosphotransferase enzyme family 170 234 1.5E-6 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase UP17_15380 4567800f0ebcf5fc6efc39ae2442f135 359 Gene3D G3DSA:1.20.1090.10 174 359 4.1E-51 T 11-10-2018 UP17_15380 4567800f0ebcf5fc6efc39ae2442f135 359 SUPERFAMILY SSF56796 5 351 9.81E-99 T 11-10-2018 UP17_15380 4567800f0ebcf5fc6efc39ae2442f135 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 356 63.729 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 UP17_15380 4567800f0ebcf5fc6efc39ae2442f135 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 1.4E-115 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 UP17_15380 4567800f0ebcf5fc6efc39ae2442f135 359 Pfam PF01761 3-dehydroquinate synthase 69 325 9.2E-96 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 UP17_15380 4567800f0ebcf5fc6efc39ae2442f135 359 Gene3D G3DSA:3.40.50.1970 1 173 7.2E-64 T 11-10-2018 UP17_15380 4567800f0ebcf5fc6efc39ae2442f135 359 PIRSF PIRSF001455 3 358 3.2E-104 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 UP17_11275 1ff6eb1732e07aef6fd51e349e3d26c2 176 Pfam PF06866 Protein of unknown function (DUF1256) 19 164 2.1E-55 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 UP17_11275 1ff6eb1732e07aef6fd51e349e3d26c2 176 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 28 165 1.4E-49 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 UP17_11275 1ff6eb1732e07aef6fd51e349e3d26c2 176 SUPERFAMILY SSF53163 24 166 1.44E-36 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily UP17_11325 7a231c718c8c9a6e13359b72f3a34b19 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 2.0E-46 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_11325 7a231c718c8c9a6e13359b72f3a34b19 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 3.0E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_11325 7a231c718c8c9a6e13359b72f3a34b19 420 SUPERFAMILY SSF56672 5 347 3.61E-57 T 11-10-2018 UP17_11325 7a231c718c8c9a6e13359b72f3a34b19 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 2.1E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_11325 7a231c718c8c9a6e13359b72f3a34b19 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_11325 7a231c718c8c9a6e13359b72f3a34b19 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_11325 7a231c718c8c9a6e13359b72f3a34b19 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 PIRSF PIRSF001438 1 310 1.8E-120 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 292 2.6E-17 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.291 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 SUPERFAMILY SSF54782 221 308 7.19E-20 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 Gene3D G3DSA:3.30.160.40 220 304 9.6E-26 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 SUPERFAMILY SSF53850 2 216 8.69E-81 T 11-10-2018 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 Gene3D G3DSA:3.40.190.10 4 209 4.1E-85 T 11-10-2018 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 Gene3D G3DSA:3.40.190.10 101 201 4.1E-85 T 11-10-2018 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 3.5E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 3.5E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 3.5E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 3.5E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 3.5E-49 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 5.4E-109 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17660 a5724ebbed939613c603544bfe82a1a1 310 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 3.2E-80 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_11300 3ef85169d43beb6a592fcd0afd2dc76d 331 Gene3D G3DSA:3.20.20.140 2 315 2.0E-90 T 11-10-2018 UP17_11300 3ef85169d43beb6a592fcd0afd2dc76d 331 SUPERFAMILY SSF51556 1 314 9.6E-64 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_11300 3ef85169d43beb6a592fcd0afd2dc76d 331 Pfam PF02126 Phosphotriesterase family 12 314 4.1E-59 T 11-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 UP17_23165 a08e53e186369c1c550e36908e292ad6 431 Gene3D G3DSA:3.40.640.10 1 282 2.9E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_23165 a08e53e186369c1c550e36908e292ad6 431 PIRSF PIRSF001434 1 421 4.7E-123 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_23165 a08e53e186369c1c550e36908e292ad6 431 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 418 1.6E-135 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_23165 a08e53e186369c1c550e36908e292ad6 431 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 418 4.4E-190 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 UP17_23165 a08e53e186369c1c550e36908e292ad6 431 SUPERFAMILY SSF53383 2 418 1.45E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_23165 a08e53e186369c1c550e36908e292ad6 431 Gene3D G3DSA:3.90.1150.10 286 430 3.0E-46 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 Pfam PF01514 Secretory protein of YscJ/FliF family 30 219 4.1E-57 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 Pfam PF08345 Flagellar M-ring protein C-terminal 255 396 8.9E-21 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 Gene3D G3DSA:3.30.300.30 130 219 5.2E-9 T 11-10-2018 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 PRINTS PR01009 Flagellar M-ring protein signature 153 167 2.4E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 PRINTS PR01009 Flagellar M-ring protein signature 268 286 2.4E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 PRINTS PR01009 Flagellar M-ring protein signature 346 370 2.4E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 PRINTS PR01009 Flagellar M-ring protein signature 197 215 2.4E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 PRINTS PR01009 Flagellar M-ring protein signature 121 139 2.4E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 3 529 5.0E-121 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UP17_07770 4b967f55d5d1e51a512758fb7fd79f78 529 PIRSF PIRSF004862 1 529 9.3E-100 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 UP17_24935 64e18aaa6a4fc0526607f80df53731f8 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 1.0E-119 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 UP17_24935 64e18aaa6a4fc0526607f80df53731f8 454 Gene3D G3DSA:1.10.860.10 1 166 2.5E-66 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal UP17_24935 64e18aaa6a4fc0526607f80df53731f8 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 9.2E-36 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 UP17_24935 64e18aaa6a4fc0526607f80df53731f8 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 442 6.4E-188 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 UP17_24935 64e18aaa6a4fc0526607f80df53731f8 454 SUPERFAMILY SSF48024 8 119 1.7E-37 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 UP17_24935 64e18aaa6a4fc0526607f80df53731f8 454 Gene3D G3DSA:3.40.50.300 167 454 4.9E-120 T 11-10-2018 UP17_24935 64e18aaa6a4fc0526607f80df53731f8 454 SUPERFAMILY SSF52540 183 433 1.36E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05565 2c526a3bd52d2982caa985d37adf5820 192 Pfam PF01047 MarR family 42 99 5.1E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_05565 2c526a3bd52d2982caa985d37adf5820 192 Gene3D G3DSA:1.10.10.10 1 165 6.1E-45 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_05565 2c526a3bd52d2982caa985d37adf5820 192 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site UP17_05565 2c526a3bd52d2982caa985d37adf5820 192 SMART SM00347 35 135 7.4E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_05565 2c526a3bd52d2982caa985d37adf5820 192 SUPERFAMILY SSF46785 6 158 4.92E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_05565 2c526a3bd52d2982caa985d37adf5820 192 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 1 183 47.892 T 11-10-2018 IPR023488 HTH-type transcriptional regulator Hpr UP17_12285 7bb7ab8091a2ddfbdc4416a5b341345e 125 Gene3D G3DSA:1.10.10.10 6 125 2.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12285 7bb7ab8091a2ddfbdc4416a5b341345e 125 SUPERFAMILY SSF46785 2 77 3.68E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_12285 7bb7ab8091a2ddfbdc4416a5b341345e 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 5.4E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12285 7bb7ab8091a2ddfbdc4416a5b341345e 125 SMART SM00345 14 73 1.8E-4 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 TIGRFAM TIGR01229 rocF_arginase: arginase 7 300 5.0E-104 T 11-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 Pfam PF00491 Arginase family 5 295 6.7E-81 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 Gene3D G3DSA:3.40.800.10 3 300 3.7E-115 T 11-10-2018 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 SUPERFAMILY SSF52768 5 297 1.26E-95 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 PIRSF PIRSF036979 2 296 5.6E-38 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 PRINTS PR00116 Arginase signature 257 271 2.7E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 PRINTS PR00116 Arginase signature 173 191 2.7E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 PRINTS PR00116 Arginase signature 96 111 2.7E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 PRINTS PR00116 Arginase signature 119 146 2.7E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_00960 f9fb2ef8f7b0839fe04124ae811eccea 300 PRINTS PR00116 Arginase signature 222 251 2.7E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_23790 1e5e8f93a6d23d117ed8f8711bba716b 466 Gene3D G3DSA:3.40.50.300 300 435 1.0E-17 T 11-10-2018 UP17_23790 1e5e8f93a6d23d117ed8f8711bba716b 466 SMART SM00490 340 421 0.006 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_23790 1e5e8f93a6d23d117ed8f8711bba716b 466 Gene3D G3DSA:3.40.50.300 119 289 2.1E-16 T 11-10-2018 UP17_23790 1e5e8f93a6d23d117ed8f8711bba716b 466 SUPERFAMILY SSF52540 132 431 3.23E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23790 1e5e8f93a6d23d117ed8f8711bba716b 466 Pfam PF00271 Helicase conserved C-terminal domain 328 419 3.8E-5 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_23790 1e5e8f93a6d23d117ed8f8711bba716b 466 SMART SM00487 114 296 2.2E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_23790 1e5e8f93a6d23d117ed8f8711bba716b 466 Pfam PF04851 Type III restriction enzyme, res subunit 118 265 1.7E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 UP17_22370 585f949bc35f7abfb76b0dd9d0264ddd 76 Gene3D G3DSA:1.10.260.40 9 65 4.3E-7 T 11-10-2018 UP17_22370 585f949bc35f7abfb76b0dd9d0264ddd 76 Pfam PF01381 Helix-turn-helix 18 60 1.5E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_22370 585f949bc35f7abfb76b0dd9d0264ddd 76 SUPERFAMILY SSF47413 17 61 2.75E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_09670 747aae7055a54cb20148b98293814488 804 Pfam PF00702 haloacid dehalogenase-like hydrolase 494 711 1.5E-45 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 Pfam PF00403 Heavy-metal-associated domain 11 69 3.3E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UP17_09670 747aae7055a54cb20148b98293814488 804 Pfam PF00403 Heavy-metal-associated domain 78 137 2.9E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 UP17_09670 747aae7055a54cb20148b98293814488 804 SUPERFAMILY SSF56784 496 797 2.03E-62 T 11-10-2018 IPR036412 HAD-like superfamily UP17_09670 747aae7055a54cb20148b98293814488 804 Gene3D G3DSA:3.40.1110.10 509 629 3.2E-94 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 Gene3D G3DSA:3.30.70.100 75 149 5.7E-22 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 SUPERFAMILY SSF81653 300 396 9.81E-30 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 SUPERFAMILY SSF55008 3 72 2.62E-18 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 UP17_09670 747aae7055a54cb20148b98293814488 804 SUPERFAMILY SSF55008 75 143 1.44E-20 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 UP17_09670 747aae7055a54cb20148b98293814488 804 ProSitePatterns PS01047 Heavy-metal-associated domain. 80 109 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 UP17_09670 747aae7055a54cb20148b98293814488 804 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 210 800 9.6E-187 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 212 237 8.2E-15 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 7 32 8.2E-15 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 33 56 8.2E-15 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 Gene3D G3DSA:3.40.50.1000 479 749 3.2E-94 T 11-10-2018 IPR023214 HAD superfamily UP17_09670 747aae7055a54cb20148b98293814488 804 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 229 799 5.0E-199 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 71 4.6E-13 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 75 138 5.2E-12 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 UP17_09670 747aae7055a54cb20148b98293814488 804 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 269 781 3.8E-93 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 Pfam PF00122 E1-E2 ATPase 297 477 2.5E-57 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 SUPERFAMILY SSF81665 249 779 1.02E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 UP17_09670 747aae7055a54cb20148b98293814488 804 Gene3D G3DSA:3.30.70.100 2 74 8.0E-20 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 2.8E-27 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 2.8E-27 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 2.8E-27 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 2.8E-27 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 2.8E-27 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 2.8E-27 T 11-10-2018 UP17_09670 747aae7055a54cb20148b98293814488 804 Gene3D G3DSA:2.70.150.20 289 401 8.1E-44 T 11-10-2018 UP17_11740 fd93f087b74960f1ed69c3cb5a5afab0 226 SUPERFAMILY SSF56436 10 225 5.18E-52 T 11-10-2018 IPR016187 C-type lectin fold UP17_11740 fd93f087b74960f1ed69c3cb5a5afab0 226 Pfam PF03781 Sulfatase-modifying factor enzyme 1 13 224 2.6E-37 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 UP17_11740 fd93f087b74960f1ed69c3cb5a5afab0 226 Gene3D G3DSA:3.90.1580.10 5 225 1.2E-65 T 11-10-2018 UP17_13320 2a9f2291f933421114d45c2e74ce7eac 359 SUPERFAMILY SSF53756 5 354 1.17E-41 T 11-10-2018 UP17_13320 2a9f2291f933421114d45c2e74ce7eac 359 Gene3D G3DSA:3.40.50.2000 12 346 3.4E-36 T 11-10-2018 UP17_13320 2a9f2291f933421114d45c2e74ce7eac 359 Gene3D G3DSA:3.40.50.2000 153 338 3.4E-36 T 11-10-2018 UP17_13320 2a9f2291f933421114d45c2e74ce7eac 359 Pfam PF00534 Glycosyl transferases group 1 164 332 3.5E-25 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_13830 ea0eade4c38b464197d51c473c727d3d 359 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 200 351 8.0E-18 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_13830 ea0eade4c38b464197d51c473c727d3d 359 Gene3D G3DSA:3.30.300.210 216 354 1.0E-9 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_13830 ea0eade4c38b464197d51c473c727d3d 359 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 8 353 6.0E-63 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_10330 1f448cc62505a229c0f8f7c919980633 109 SUPERFAMILY SSF103481 5 104 1.57E-20 T 11-10-2018 UP17_10330 1f448cc62505a229c0f8f7c919980633 109 Gene3D G3DSA:1.10.3730.20 1 108 2.2E-32 T 11-10-2018 UP17_10330 1f448cc62505a229c0f8f7c919980633 109 Pfam PF00893 Small Multidrug Resistance protein 1 92 9.3E-30 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 UP17_17585 bdff7bc674af284d946316c8c05bac3c 224 SUPERFAMILY SSF102712 153 191 7.98E-5 T 11-10-2018 UP17_17585 bdff7bc674af284d946316c8c05bac3c 224 Gene3D G3DSA:1.10.150.20 43 92 1.6E-6 T 11-10-2018 UP17_17585 bdff7bc674af284d946316c8c05bac3c 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.8E-85 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 UP17_17585 bdff7bc674af284d946316c8c05bac3c 224 SUPERFAMILY SSF47781 16 90 1.08E-7 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_17585 bdff7bc674af284d946316c8c05bac3c 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site UP17_17585 bdff7bc674af284d946316c8c05bac3c 224 Pfam PF04002 RadC-like JAB domain 103 222 1.4E-48 T 11-10-2018 IPR025657 RadC-like JAB domain UP17_17585 bdff7bc674af284d946316c8c05bac3c 224 Gene3D G3DSA:3.40.140.10 100 224 5.0E-49 T 11-10-2018 UP17_13090 2f3278680a527349a85b53fb516dff9c 248 SUPERFAMILY SSF141523 28 151 3.66E-32 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like UP17_13090 2f3278680a527349a85b53fb516dff9c 248 Pfam PF03734 L,D-transpeptidase catalytic domain 28 151 8.7E-24 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UP17_13090 2f3278680a527349a85b53fb516dff9c 248 Gene3D G3DSA:2.40.440.10 18 178 1.3E-39 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like UP17_13090 2f3278680a527349a85b53fb516dff9c 248 SUPERFAMILY SSF47090 179 246 2.49E-20 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_13090 2f3278680a527349a85b53fb516dff9c 248 Gene3D G3DSA:1.10.101.10 179 248 1.2E-24 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_13090 2f3278680a527349a85b53fb516dff9c 248 Pfam PF01471 Putative peptidoglycan binding domain 189 245 5.3E-17 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_07485 9f9a1584f80d2c650b57f0c1503c4b96 87 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 77 3.0E-32 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A UP17_07485 9f9a1584f80d2c650b57f0c1503c4b96 87 Pfam PF04025 Domain of unknown function (DUF370) 5 77 2.7E-37 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A UP17_07485 9f9a1584f80d2c650b57f0c1503c4b96 87 Hamap MF_01503 UPF0296 protein . 3 86 29.551 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A UP17_22065 2865237747deca5e97810b9cd986bc5c 485 PRINTS PR00723 Subtilisin serine protease family (S8) signature 204 217 2.0E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_22065 2865237747deca5e97810b9cd986bc5c 485 PRINTS PR00723 Subtilisin serine protease family (S8) signature 157 176 2.0E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_22065 2865237747deca5e97810b9cd986bc5c 485 PRINTS PR00723 Subtilisin serine protease family (S8) signature 421 437 2.0E-17 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_22065 2865237747deca5e97810b9cd986bc5c 485 Pfam PF00082 Subtilase family 159 472 4.7E-48 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_22065 2865237747deca5e97810b9cd986bc5c 485 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 162 173 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site UP17_22065 2865237747deca5e97810b9cd986bc5c 485 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 208 218 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site UP17_22065 2865237747deca5e97810b9cd986bc5c 485 SUPERFAMILY SSF52743 159 483 6.68E-70 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_22065 2865237747deca5e97810b9cd986bc5c 485 Gene3D G3DSA:3.40.50.200 113 484 2.7E-82 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_22065 2865237747deca5e97810b9cd986bc5c 485 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 422 432 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_02515 69b6a027bcd4b86c1a8a33e6bb5eb5f1 472 Gene3D G3DSA:3.40.605.10 18 463 9.7E-182 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_02515 69b6a027bcd4b86c1a8a33e6bb5eb5f1 472 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_02515 69b6a027bcd4b86c1a8a33e6bb5eb5f1 472 Gene3D G3DSA:3.40.309.10 253 440 9.7E-182 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_02515 69b6a027bcd4b86c1a8a33e6bb5eb5f1 472 PIRSF PIRSF036492 24 469 4.1E-84 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 UP17_02515 69b6a027bcd4b86c1a8a33e6bb5eb5f1 472 SUPERFAMILY SSF53720 2 469 6.81E-168 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_02515 69b6a027bcd4b86c1a8a33e6bb5eb5f1 472 Pfam PF00171 Aldehyde dehydrogenase family 18 467 8.0E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_02515 69b6a027bcd4b86c1a8a33e6bb5eb5f1 472 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 22 466 1.4E-198 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 UP17_13645 3115fd7b2a9228e54738af3266af351e 752 Gene3D G3DSA:3.40.50.300 587 752 3.8E-37 T 11-10-2018 UP17_13645 3115fd7b2a9228e54738af3266af351e 752 Gene3D G3DSA:1.10.10.160 426 499 2.1E-7 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily UP17_13645 3115fd7b2a9228e54738af3266af351e 752 Gene3D G3DSA:3.40.50.300 187 370 5.1E-13 T 11-10-2018 UP17_13645 3115fd7b2a9228e54738af3266af351e 752 SUPERFAMILY SSF52540 191 746 1.22E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13645 3115fd7b2a9228e54738af3266af351e 752 Pfam PF13538 UvrD-like helicase C-terminal domain 694 739 2.7E-7 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain UP17_13645 3115fd7b2a9228e54738af3266af351e 752 Gene3D G3DSA:3.40.50.300 425 566 2.1E-7 T 11-10-2018 UP17_13645 3115fd7b2a9228e54738af3266af351e 752 Pfam PF13245 AAA domain 202 563 1.7E-11 T 11-10-2018 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 Gene3D G3DSA:3.30.499.20 4 285 6.1E-99 T 11-10-2018 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 461 9.4E-239 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 285 299 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 396 409 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 118 131 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 194 207 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 208 221 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 81 94 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 340 351 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 132 147 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 PRINTS PR00415 Aconitase family signature 107 115 3.5E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 ProSitePatterns PS00450 Aconitase family signature 1. 336 352 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 Gene3D G3DSA:3.30.499.10 326 469 2.1E-49 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 463 58.384 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 SUPERFAMILY SSF53732 1 463 9.16E-161 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 UP17_17715 ecbbaaa97f7f9413af1df0f3b0c04799 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 454 5.3E-155 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_09750 49accad6c7eecac34e51ce6ddac041c9 249 SUPERFAMILY SSF102588 5 212 8.63E-50 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_09750 49accad6c7eecac34e51ce6ddac041c9 249 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 135 3.6E-30 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 UP17_09750 49accad6c7eecac34e51ce6ddac041c9 249 Gene3D G3DSA:3.40.50.10320 1 229 1.1E-51 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_21195 f853e22f875320df1dca662a86f12086 253 SUPERFAMILY SSF81606 20 238 4.84E-12 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_21195 f853e22f875320df1dca662a86f12086 253 Gene3D G3DSA:3.60.40.10 6 243 1.5E-9 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_21195 f853e22f875320df1dca662a86f12086 253 Pfam PF13672 Protein phosphatase 2C 21 218 1.2E-11 T 11-10-2018 UP17_12765 064a22df549df8c28c2e9853156c3d48 363 Gene3D G3DSA:3.40.50.2000 156 340 2.4E-58 T 11-10-2018 UP17_12765 064a22df549df8c28c2e9853156c3d48 363 Gene3D G3DSA:3.40.50.2000 50 346 2.4E-58 T 11-10-2018 UP17_12765 064a22df549df8c28c2e9853156c3d48 363 Pfam PF00534 Glycosyl transferases group 1 167 333 7.6E-35 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_12765 064a22df549df8c28c2e9853156c3d48 363 SUPERFAMILY SSF53756 27 353 3.87E-61 T 11-10-2018 UP17_12765 064a22df549df8c28c2e9853156c3d48 363 Pfam PF13439 Glycosyltransferase Family 4 38 159 5.9E-10 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 UP17_08400 a29d8695d9a138dc66fbf7685aa688c2 279 Gene3D G3DSA:1.10.443.10 102 278 5.8E-50 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_08400 a29d8695d9a138dc66fbf7685aa688c2 279 Gene3D G3DSA:1.10.150.130 1 101 2.3E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_08400 a29d8695d9a138dc66fbf7685aa688c2 279 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 84 1.2E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 UP17_08400 a29d8695d9a138dc66fbf7685aa688c2 279 SUPERFAMILY SSF56349 3 274 3.83E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_08400 a29d8695d9a138dc66fbf7685aa688c2 279 Pfam PF00589 Phage integrase family 106 264 3.5E-40 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_23850 afb083c183ff3ecd1144d31f85a0635b 265 SMART SM00382 49 235 2.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_23850 afb083c183ff3ecd1144d31f85a0635b 265 Gene3D G3DSA:3.40.50.300 28 264 5.5E-46 T 11-10-2018 UP17_23850 afb083c183ff3ecd1144d31f85a0635b 265 SUPERFAMILY SSF52540 31 235 1.03E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23850 afb083c183ff3ecd1144d31f85a0635b 265 Pfam PF00005 ABC transporter 40 171 3.6E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_23850 afb083c183ff3ecd1144d31f85a0635b 265 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 SUPERFAMILY SSF63380 4 104 6.81E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 Pfam PF00175 Oxidoreductase NAD-binding domain 119 207 8.9E-8 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 Gene3D G3DSA:3.10.20.30 226 321 7.8E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 7.7E-26 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 7.7E-26 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 7.7E-26 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 7.7E-26 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 7.7E-26 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 7.7E-26 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 Gene3D G3DSA:2.40.30.10 3 105 4.1E-23 T 11-10-2018 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 SUPERFAMILY SSF54292 216 319 5.51E-28 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 SUPERFAMILY SSF52343 112 227 1.27E-25 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 242 312 1.1E-16 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 UP17_14805 00fda578e640ea9944e65b38efe5ad67 321 Gene3D G3DSA:3.40.50.80 106 225 9.2E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain UP17_24810 0a68171b8902cef097f2e2180e1a7832 603 Gene3D G3DSA:1.10.274.90 3 131 7.8E-23 T 11-10-2018 UP17_24810 0a68171b8902cef097f2e2180e1a7832 603 Gene3D G3DSA:1.10.510.40 383 582 2.7E-58 T 11-10-2018 UP17_24810 0a68171b8902cef097f2e2180e1a7832 603 Pfam PF04183 IucA / IucC family 145 394 2.9E-71 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 UP17_24810 0a68171b8902cef097f2e2180e1a7832 603 Pfam PF06276 Ferric iron reductase FhuF-like transporter 415 575 5.1E-39 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Gene3D G3DSA:3.30.230.10 590 773 1.8E-86 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 SUPERFAMILY SSF88697 8 198 1.24E-44 T 11-10-2018 IPR015947 PUA-like superfamily UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 349 486 1.7E-23 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 SUPERFAMILY SSF54211 592 767 1.9E-57 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 TIGRFAM TIGR00763 lon: endopeptidase La 9 768 1.1E-304 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Gene3D G3DSA:1.20.58.1480 118 242 1.2E-42 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 567 769 4.0E-98 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Gene3D G3DSA:2.30.130.40 3 114 1.2E-26 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 670 689 3.4E-53 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 723 741 3.4E-53 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 353 372 3.4E-53 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 700 719 3.4E-53 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 592 608 3.4E-53 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 SUPERFAMILY SSF52540 310 585 3.97E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Hamap MF_01973 Lon protease [lon]. 8 769 71.851 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Gene3D G3DSA:1.10.8.60 489 581 1.0E-33 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Gene3D G3DSA:3.40.50.300 310 488 5.0E-68 T 11-10-2018 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 PIRSF PIRSF001174 1 772 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 SMART SM00382 345 490 5.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 SMART SM00464 7 199 1.3E-66 T 11-10-2018 IPR003111 Lon, substrate-binding domain UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 673 681 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 UP17_17685 9fa73c9b1c4901d926e3e08cbd89e93e 773 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 8 198 2.7E-40 T 11-10-2018 IPR003111 Lon, substrate-binding domain UP17_15665 3e76f5c75da265255b89b46a75036fb3 187 Pfam PF00578 AhpC/TSA family 4 133 1.5E-37 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_15665 3e76f5c75da265255b89b46a75036fb3 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 1.0E-6 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_15665 3e76f5c75da265255b89b46a75036fb3 187 Gene3D G3DSA:3.40.30.10 1 186 3.1E-68 T 11-10-2018 UP17_15665 3e76f5c75da265255b89b46a75036fb3 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 6.2E-95 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 UP17_15665 3e76f5c75da265255b89b46a75036fb3 187 SUPERFAMILY SSF52833 1 186 1.91E-59 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_15665 3e76f5c75da265255b89b46a75036fb3 187 PIRSF PIRSF000239 1 187 1.7E-58 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 SUPERFAMILY SSF53901 3 251 3.4E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 Gene3D G3DSA:3.40.47.10 256 400 2.6E-56 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 1.2E-39 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 SUPERFAMILY SSF53901 214 411 6.67E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 PIRSF PIRSF000447 1 412 1.2E-187 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 1.8E-200 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 Gene3D G3DSA:3.40.47.10 1 254 6.2E-103 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 1.9E-59 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal UP17_05960 14c19f41da5c6e8b9c5defb55624cb0e 412 SMART SM00825 Beta-ketoacyl synthase 6 412 9.6E-17 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 Gene3D G3DSA:3.10.580.10 198 349 6.3E-48 T 11-10-2018 UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 SMART SM01091 355 432 3.0E-22 T 11-10-2018 IPR005170 Transporter-associated domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 Pfam PF03471 Transporter associated domain 356 431 1.3E-17 T 11-10-2018 IPR005170 Transporter-associated domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 Pfam PF00571 CBS domain 290 339 3.5E-5 T 11-10-2018 IPR000644 CBS domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 Pfam PF00571 CBS domain 223 270 3.6E-5 T 11-10-2018 IPR000644 CBS domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 SMART SM00116 291 339 2.8 T 11-10-2018 IPR000644 CBS domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 SMART SM00116 226 275 0.019 T 11-10-2018 IPR000644 CBS domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 Gene3D G3DSA:3.30.465.10 350 430 5.6E-17 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 Pfam PF01595 Domain of unknown function DUF21 9 202 5.2E-48 T 11-10-2018 IPR002550 CNNM, transmembrane domain UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 SUPERFAMILY SSF56176 350 430 3.82E-17 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_01235 312ee39a5d83574aacb7c26ec60a9557 432 SUPERFAMILY SSF54631 205 342 1.52E-30 T 11-10-2018 UP17_20860 3c416d049fdc0044812db42bb7b06956 334 Gene3D G3DSA:3.30.200.20 3 98 3.6E-5 T 11-10-2018 UP17_20860 3c416d049fdc0044812db42bb7b06956 334 Pfam PF01636 Phosphotransferase enzyme family 32 243 1.2E-22 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase UP17_20860 3c416d049fdc0044812db42bb7b06956 334 SUPERFAMILY SSF56112 11 321 5.91E-49 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_20860 3c416d049fdc0044812db42bb7b06956 334 Gene3D G3DSA:3.90.1200.10 121 324 2.3E-21 T 11-10-2018 UP17_05345 6eea41d948f68c9284608578706ede96 370 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 361 1.0E-130 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_05345 6eea41d948f68c9284608578706ede96 370 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_05345 6eea41d948f68c9284608578706ede96 370 Gene3D G3DSA:3.40.640.10 3 245 4.3E-86 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_05345 6eea41d948f68c9284608578706ede96 370 Gene3D G3DSA:3.90.1150.10 246 278 3.8E-6 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_05345 6eea41d948f68c9284608578706ede96 370 Gene3D G3DSA:3.90.1150.10 279 362 1.3E-24 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_05345 6eea41d948f68c9284608578706ede96 370 SUPERFAMILY SSF53383 14 363 9.58E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05345 6eea41d948f68c9284608578706ede96 370 PIRSF PIRSF001434 1 365 2.2E-120 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_05100 868a562dec894d3f6480eb86187d60ad 321 SMART SM00450 116 217 2.0E-17 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_05100 868a562dec894d3f6480eb86187d60ad 321 Pfam PF00581 Rhodanese-like domain 117 211 3.6E-10 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_05100 868a562dec894d3f6480eb86187d60ad 321 SUPERFAMILY SSF52821 89 247 7.41E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_05100 868a562dec894d3f6480eb86187d60ad 321 Gene3D G3DSA:3.30.70.100 1 98 4.5E-30 T 11-10-2018 UP17_05100 868a562dec894d3f6480eb86187d60ad 321 Pfam PF12368 Rhodanase C-terminal 223 289 8.0E-15 T 11-10-2018 IPR022111 Rhodanase, C-terminal UP17_05100 868a562dec894d3f6480eb86187d60ad 321 Gene3D G3DSA:3.40.250.10 103 250 5.3E-44 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_05100 868a562dec894d3f6480eb86187d60ad 321 Hamap MF_00469 UPF0176 protein YceA [yceA]. 4 268 39.399 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 UP17_05490 9228f2e211c9ac10e0a505e6e9638322 307 SUPERFAMILY SSF53686 4 305 6.55E-100 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_05490 9228f2e211c9ac10e0a505e6e9638322 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 35 53 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 UP17_05490 9228f2e211c9ac10e0a505e6e9638322 307 Gene3D G3DSA:3.40.50.1100 47 146 8.9E-119 T 11-10-2018 UP17_05490 9228f2e211c9ac10e0a505e6e9638322 307 Gene3D G3DSA:3.40.50.1100 8 302 8.9E-119 T 11-10-2018 UP17_05490 9228f2e211c9ac10e0a505e6e9638322 307 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 306 1.2E-125 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 UP17_05490 9228f2e211c9ac10e0a505e6e9638322 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 294 6.1E-69 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_05490 9228f2e211c9ac10e0a505e6e9638322 307 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 306 9.1E-133 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 UP17_17385 7df847bc9c1a0141be49ff34bec96e86 170 Gene3D G3DSA:3.40.50.2020 1 170 1.6E-58 T 11-10-2018 UP17_17385 7df847bc9c1a0141be49ff34bec96e86 170 SUPERFAMILY SSF53271 2 163 6.25E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_17385 7df847bc9c1a0141be49ff34bec96e86 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.352 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 UP17_17385 7df847bc9c1a0141be49ff34bec96e86 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 169 1.4E-70 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 UP17_17385 7df847bc9c1a0141be49ff34bec96e86 170 Pfam PF00156 Phosphoribosyl transferase domain 26 149 1.5E-15 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_12145 e68cb711160be519225b4710ea9671e0 409 Gene3D G3DSA:1.20.1250.20 7 204 1.9E-18 T 11-10-2018 UP17_12145 e68cb711160be519225b4710ea9671e0 409 SUPERFAMILY SSF103473 6 400 1.57E-46 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_12145 e68cb711160be519225b4710ea9671e0 409 Pfam PF07690 Major Facilitator Superfamily 18 242 5.3E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_12145 e68cb711160be519225b4710ea9671e0 409 Gene3D G3DSA:1.20.1250.20 217 406 2.9E-14 T 11-10-2018 UP17_10500 f0bb144125d7faf84d38d276a0a3faf7 330 Gene3D G3DSA:3.20.20.140 1 330 5.4E-102 T 11-10-2018 UP17_10500 f0bb144125d7faf84d38d276a0a3faf7 330 SUPERFAMILY SSF51556 1 328 3.71E-89 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_10500 f0bb144125d7faf84d38d276a0a3faf7 330 Pfam PF04909 Amidohydrolase 3 328 4.8E-52 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_22845 3cb87d0e5a239d1d464b6cb75558444e 158 Gene3D G3DSA:3.40.630.30 23 158 1.9E-20 T 11-10-2018 UP17_22845 3cb87d0e5a239d1d464b6cb75558444e 158 Pfam PF00583 Acetyltransferase (GNAT) family 12 118 2.0E-11 T 11-10-2018 IPR000182 GNAT domain UP17_22845 3cb87d0e5a239d1d464b6cb75558444e 158 SUPERFAMILY SSF55729 22 126 8.89E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_09935 f8766243dcbb7e9d767c2bb1dab5b803 175 Gene3D G3DSA:2.102.10.10 63 174 6.2E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_09935 f8766243dcbb7e9d767c2bb1dab5b803 175 SUPERFAMILY SSF50022 27 167 2.62E-29 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_09935 f8766243dcbb7e9d767c2bb1dab5b803 175 Pfam PF00355 Rieske [2Fe-2S] domain 76 156 5.4E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 UP17_03380 f4b004e8a8d1d4bd724fc349422e5179 390 SUPERFAMILY SSF46785 1 59 1.39E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03380 f4b004e8a8d1d4bd724fc349422e5179 390 Gene3D G3DSA:3.30.420.40 73 371 7.2E-83 T 11-10-2018 UP17_03380 f4b004e8a8d1d4bd724fc349422e5179 390 Gene3D G3DSA:3.30.420.40 190 362 7.2E-83 T 11-10-2018 UP17_03380 f4b004e8a8d1d4bd724fc349422e5179 390 Gene3D G3DSA:1.10.10.10 1 62 2.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03380 f4b004e8a8d1d4bd724fc349422e5179 390 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 40 2.5E-5 T 11-10-2018 UP17_03380 f4b004e8a8d1d4bd724fc349422e5179 390 SUPERFAMILY SSF53067 67 380 4.6E-60 T 11-10-2018 UP17_03380 f4b004e8a8d1d4bd724fc349422e5179 390 Pfam PF00480 ROK family 69 377 1.5E-56 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 SUPERFAMILY SSF55874 423 592 6.16E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 Gene3D G3DSA:3.30.565.10 437 595 2.6E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 590 9.9E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 SMART SM00387 480 593 5.9E-41 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 SMART SM00304 196 248 8.1E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 SMART SM00388 367 434 1.8E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 Pfam PF00672 HAMP domain 197 243 5.7E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 434 1.2E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 590 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 546 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 571 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 532 2.0E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 Gene3D G3DSA:1.10.287.130 361 436 3.1E-25 T 11-10-2018 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 SUPERFAMILY SSF55785 243 358 1.51E-8 T 11-10-2018 IPR035965 PAS domain superfamily UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 Gene3D G3DSA:3.30.450.20 257 360 2.4E-8 T 11-10-2018 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 SUPERFAMILY SSF158472 197 244 7.45E-10 T 11-10-2018 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 SUPERFAMILY SSF47384 351 436 1.2E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_15615 fbff3430af0c2ab31fc94dad85702f2e 597 Gene3D G3DSA:1.20.1480.50 158 254 2.0E-19 T 11-10-2018 UP17_24195 54b00ee2036701e6932ca9b08e0886f9 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 3.2E-92 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 UP17_24195 54b00ee2036701e6932ca9b08e0886f9 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.1E-72 T 11-10-2018 UP17_24195 54b00ee2036701e6932ca9b08e0886f9 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.097 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 UP17_24195 54b00ee2036701e6932ca9b08e0886f9 209 SUPERFAMILY SSF53271 4 207 1.19E-71 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_24195 54b00ee2036701e6932ca9b08e0886f9 209 Gene3D G3DSA:3.40.50.2020 2 209 8.3E-81 T 11-10-2018 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 Gene3D G3DSA:3.30.420.40 150 313 7.3E-130 T 11-10-2018 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 Pfam PF06723 MreB/Mbl protein 7 330 2.9E-151 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 Gene3D G3DSA:3.90.640.10 182 255 7.3E-130 T 11-10-2018 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 Gene3D G3DSA:3.30.420.40 9 323 7.3E-130 T 11-10-2018 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 SUPERFAMILY SSF53067 8 142 6.33E-38 T 11-10-2018 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 332 7.6E-158 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 UP17_17580 41bebda1370c4a1b8893da4fe0b90d19 339 SUPERFAMILY SSF53067 146 328 7.47E-50 T 11-10-2018 UP17_18235 e6711a166c04b32443c7a28a95954a1c 312 Pfam PF02272 DHHA1 domain 182 307 1.6E-15 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 UP17_18235 e6711a166c04b32443c7a28a95954a1c 312 Gene3D G3DSA:3.90.1640.10 1 197 9.6E-58 T 11-10-2018 UP17_18235 e6711a166c04b32443c7a28a95954a1c 312 Pfam PF01368 DHH family 15 153 6.7E-12 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_18235 e6711a166c04b32443c7a28a95954a1c 312 SUPERFAMILY SSF64182 12 301 2.22E-72 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily UP17_18235 e6711a166c04b32443c7a28a95954a1c 312 Gene3D G3DSA:3.10.310.30 199 312 1.6E-35 T 11-10-2018 UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 SMART SM00257 73 116 1.6E-15 T 11-10-2018 IPR018392 LysM domain UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 SMART SM00257 26 69 4.5E-12 T 11-10-2018 IPR018392 LysM domain UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 Gene3D G3DSA:3.10.350.10 72 123 1.0E-19 T 11-10-2018 IPR036779 LysM domain superfamily UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 Gene3D G3DSA:3.10.350.10 25 71 1.9E-16 T 11-10-2018 IPR036779 LysM domain superfamily UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 Pfam PF06725 3D domain 241 301 1.2E-20 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 SUPERFAMILY SSF54106 73 115 1.01E-11 T 11-10-2018 UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 Pfam PF01476 LysM domain 28 68 1.3E-12 T 11-10-2018 IPR018392 LysM domain UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 Pfam PF01476 LysM domain 74 115 1.6E-15 T 11-10-2018 IPR018392 LysM domain UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 Gene3D G3DSA:2.40.40.10 146 290 3.5E-6 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 SUPERFAMILY SSF50685 242 282 8.72E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_13595 4d3f2701c5be235a738598ec1f8b17d8 301 SUPERFAMILY SSF54106 28 68 2.09E-10 T 11-10-2018 UP17_02765 4c5e9b0db796ca6eff91acfc967a9087 270 Pfam PF14167 YfkD-like protein 39 270 4.3E-118 T 11-10-2018 IPR025548 YfkD-like protein UP17_13750 82fd9968bcdc037cf6703dc27a8d5c52 538 Gene3D G3DSA:3.20.20.70 123 522 5.6E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_13750 82fd9968bcdc037cf6703dc27a8d5c52 538 PIRSF PIRSF006429 1 538 2.7E-160 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein UP17_13750 82fd9968bcdc037cf6703dc27a8d5c52 538 PIRSF PIRSF500060 5 538 1.4E-210 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria UP17_13750 82fd9968bcdc037cf6703dc27a8d5c52 538 Pfam PF01645 Conserved region in glutamate synthase 123 494 2.6E-105 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 UP17_13750 82fd9968bcdc037cf6703dc27a8d5c52 538 SUPERFAMILY SSF51395 22 524 9.52E-109 T 11-10-2018 UP17_10180 33ddf88c04672cdcdcd49c300a813581 351 Gene3D G3DSA:3.60.130.10 59 317 5.0E-45 T 11-10-2018 UP17_10180 33ddf88c04672cdcdcd49c300a813581 351 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 53 307 2.5E-32 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 UP17_10180 33ddf88c04672cdcdcd49c300a813581 351 SUPERFAMILY SSF51197 31 314 3.21E-51 T 11-10-2018 UP17_20640 cfe68ca40fa20344585309ac2a103d1a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 303 3.5E-42 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_20640 cfe68ca40fa20344585309ac2a103d1a 306 SUPERFAMILY SSF161098 91 292 7.33E-23 T 11-10-2018 IPR035906 MetI-like superfamily UP17_20640 cfe68ca40fa20344585309ac2a103d1a 306 Gene3D G3DSA:1.10.3720.10 87 302 7.1E-26 T 11-10-2018 IPR035906 MetI-like superfamily UP17_23750 fa932e5aef8424d9b5c27376e391ae33 147 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 24.599 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 UP17_23750 fa932e5aef8424d9b5c27376e391ae33 147 Gene3D G3DSA:2.30.290.10 1 146 1.1E-49 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily UP17_23750 fa932e5aef8424d9b5c27376e391ae33 147 Pfam PF02623 FliW protein 20 137 2.7E-37 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 UP17_23750 fa932e5aef8424d9b5c27376e391ae33 147 SUPERFAMILY SSF141457 1 139 1.96E-44 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily UP17_22570 2e44479629d22dcc286a5934d2fa689c 389 SUPERFAMILY SSF51905 188 385 5.93E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22570 2e44479629d22dcc286a5934d2fa689c 389 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 319 9.4E-14 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase UP17_22570 2e44479629d22dcc286a5934d2fa689c 389 SUPERFAMILY SSF51905 4 239 5.9E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22570 2e44479629d22dcc286a5934d2fa689c 389 Gene3D G3DSA:3.50.50.60 1 389 3.5E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_00985 330b9bd61cc7a58739419c4d13ed4260 450 Pfam PF07949 YbbR-like protein 237 314 8.3E-10 T 11-10-2018 IPR012505 YbbR-like UP17_00985 330b9bd61cc7a58739419c4d13ed4260 450 Pfam PF07949 YbbR-like protein 53 135 3.5E-10 T 11-10-2018 IPR012505 YbbR-like UP17_00985 330b9bd61cc7a58739419c4d13ed4260 450 Pfam PF07949 YbbR-like protein 143 227 6.2E-12 T 11-10-2018 IPR012505 YbbR-like UP17_00985 330b9bd61cc7a58739419c4d13ed4260 450 Gene3D G3DSA:2.170.120.30 359 450 1.3E-15 T 11-10-2018 UP17_00985 330b9bd61cc7a58739419c4d13ed4260 450 Gene3D G3DSA:2.170.120.40 144 231 2.9E-9 T 11-10-2018 UP17_00985 330b9bd61cc7a58739419c4d13ed4260 450 Gene3D G3DSA:2.170.120.40 234 334 5.2E-16 T 11-10-2018 UP17_00985 330b9bd61cc7a58739419c4d13ed4260 450 Gene3D G3DSA:2.170.120.30 40 143 2.4E-27 T 11-10-2018 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 72 16.344 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 72 6.8E-24 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.1E-21 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.1E-21 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.1E-21 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 Pfam PF00137 ATP synthase subunit C 8 70 3.5E-14 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 SUPERFAMILY SSF81333 4 73 2.35E-20 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily UP17_24170 f4338bcb4fca53fe53238a1916a96783 74 Gene3D G3DSA:1.20.20.10 4 74 8.0E-30 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_04550 f85a7359044fdd6655c5709dbdd381f8 216 Pfam PF00881 Nitroreductase family 19 194 5.5E-36 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_04550 f85a7359044fdd6655c5709dbdd381f8 216 Gene3D G3DSA:3.40.109.10 7 214 1.7E-57 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_04550 f85a7359044fdd6655c5709dbdd381f8 216 SUPERFAMILY SSF55469 13 213 9.82E-55 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_00830 b9a1abfac25750be35620f2c56f8f378 279 Gene3D G3DSA:3.40.50.300 2 277 1.5E-80 T 11-10-2018 UP17_00830 b9a1abfac25750be35620f2c56f8f378 279 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_00830 b9a1abfac25750be35620f2c56f8f378 279 SUPERFAMILY SSF52540 5 229 8.37E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00830 b9a1abfac25750be35620f2c56f8f378 279 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 273 2.4E-120 T 11-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 UP17_00830 b9a1abfac25750be35620f2c56f8f378 279 SMART SM00382 32 217 9.4E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_00830 b9a1abfac25750be35620f2c56f8f378 279 Pfam PF00005 ABC transporter 23 169 1.8E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_18855 e3263b12dace48ab5b6bfd62c3567bca 397 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 395 2.1E-48 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 UP17_18855 e3263b12dace48ab5b6bfd62c3567bca 397 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 1.8E-17 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 Gene3D G3DSA:3.40.50.720 92 286 1.9E-73 T 11-10-2018 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 39 314 6.2E-20 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 Gene3D G3DSA:3.40.50.720 39 311 1.9E-73 T 11-10-2018 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 282 1.1E-40 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 SUPERFAMILY SSF52283 35 112 5.67E-21 T 11-10-2018 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 SUPERFAMILY SSF55021 317 399 1.17E-10 T 11-10-2018 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 Gene3D G3DSA:3.30.70.260 316 399 8.7E-15 T 11-10-2018 UP17_20245 f3a9fd3eed5c82e39d09a803a71522d3 399 SUPERFAMILY SSF51735 94 283 1.14E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_18635 b73ae42be145c94067d22f7063e04e4a 271 SUPERFAMILY SSF69618 6 267 4.84E-48 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_18635 b73ae42be145c94067d22f7063e04e4a 271 Pfam PF02602 Uroporphyrinogen-III synthase HemD 19 256 5.4E-36 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_18635 b73ae42be145c94067d22f7063e04e4a 271 Gene3D G3DSA:3.40.50.10090 13 256 5.8E-68 T 11-10-2018 UP17_18635 b73ae42be145c94067d22f7063e04e4a 271 Gene3D G3DSA:3.40.50.10090 37 173 5.8E-68 T 11-10-2018 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Pfam PF00512 His Kinase A (phospho-acceptor) domain 363 429 1.7E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Gene3D G3DSA:3.30.450.20 245 356 4.5E-10 T 11-10-2018 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 SMART SM00304 188 240 0.0094 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 SUPERFAMILY SSF55785 235 355 3.43E-9 T 11-10-2018 IPR035965 PAS domain superfamily UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 SMART SM00387 476 588 9.9E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 SUPERFAMILY SSF47384 350 430 2.94E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 SUPERFAMILY SSF55874 420 584 4.45E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Gene3D G3DSA:3.30.565.10 437 589 2.2E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 SUPERFAMILY SSF158472 190 237 1.03E-6 T 11-10-2018 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 566 2.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 2.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 2.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 585 2.3E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Gene3D G3DSA:1.20.1480.50 149 244 5.0E-9 T 11-10-2018 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Pfam PF16736 Single Cache-like 33 149 2.8E-15 T 11-10-2018 IPR031967 PhoR, single Cache-like domain UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 SMART SM00388 363 430 5.1E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 585 5.1E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Gene3D G3DSA:1.10.287.130 357 434 2.4E-27 T 11-10-2018 UP17_18140 b0dda08f78edba691449e41bf7c5f215 592 Pfam PF00989 PAS fold 248 354 5.6E-7 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_11140 d60956e92d447f8c1cbc9e0deb43a1fd 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 28 276 3.1E-70 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 UP17_11140 d60956e92d447f8c1cbc9e0deb43a1fd 276 Pfam PF02540 NAD synthase 25 266 5.7E-66 T 11-10-2018 IPR022310 NAD/GMP synthase UP17_11140 d60956e92d447f8c1cbc9e0deb43a1fd 276 Gene3D G3DSA:3.40.50.620 3 276 2.7E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_11140 d60956e92d447f8c1cbc9e0deb43a1fd 276 SUPERFAMILY SSF52402 4 275 5.24E-79 T 11-10-2018 UP17_11140 d60956e92d447f8c1cbc9e0deb43a1fd 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 19 270 45.766 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 UP17_12100 921009e9973cefa8759fdc4653ee9f2f 130 Gene3D G3DSA:3.30.530.20 3 129 7.1E-33 T 11-10-2018 IPR023393 START-like domain superfamily UP17_12100 921009e9973cefa8759fdc4653ee9f2f 130 SUPERFAMILY SSF55961 6 128 2.29E-30 T 11-10-2018 UP17_12100 921009e9973cefa8759fdc4653ee9f2f 130 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 128 4.6E-22 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 17 283 7.0E-107 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 Gene3D G3DSA:1.10.1670.10 20 222 1.9E-89 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 Pfam PF14815 NUDIX domain 245 363 9.7E-18 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 Gene3D G3DSA:3.90.79.10 239 370 2.2E-23 T 11-10-2018 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 Gene3D G3DSA:1.10.340.30 31 142 1.9E-89 T 11-10-2018 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 SUPERFAMILY SSF48150 14 232 5.97E-75 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 SUPERFAMILY SSF55811 230 366 2.19E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 Pfam PF00633 Helix-hairpin-helix motif 109 138 1.9E-10 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 SMART SM00478 49 200 8.9E-52 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 SMART SM00525 201 221 0.0031 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 UP17_03790 c8f807be4b1c3821e8f4bb4285cd8d12 372 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 176 3.0E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_10595 c880576dba2e14c70732fdc07697e6bb 203 Pfam PF02581 Thiamine monophosphate synthase 17 182 2.3E-38 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_10595 c880576dba2e14c70732fdc07697e6bb 203 SUPERFAMILY SSF51391 25 196 2.35E-45 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_10595 c880576dba2e14c70732fdc07697e6bb 203 Gene3D G3DSA:3.20.20.70 4 202 7.0E-54 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_09315 fe3e27c1f1d4a277d6d23d5c36475f27 146 Pfam PF10747 Sporulation inhibitor of replication protein SirA 2 141 5.1E-41 T 11-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA UP17_09315 fe3e27c1f1d4a277d6d23d5c36475f27 146 Gene3D G3DSA:3.30.310.250 1 146 4.3E-50 T 11-10-2018 IPR038449 SirA superfamily UP17_15715 097e9ba28f91aebdc934af37a084c067 494 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 29 480 1.7E-146 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_15715 097e9ba28f91aebdc934af37a084c067 494 PIRSF PIRSF005690 8 494 2.3E-128 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_15975 5a2b7400268f6407ce9fe2594b10e7b1 375 Gene3D G3DSA:1.10.287.130 306 370 3.7E-15 T 11-10-2018 UP17_15975 5a2b7400268f6407ce9fe2594b10e7b1 375 Gene3D G3DSA:3.40.50.300 94 304 7.3E-77 T 11-10-2018 UP17_15975 5a2b7400268f6407ce9fe2594b10e7b1 375 Pfam PF03308 ArgK protein 65 335 1.3E-99 T 11-10-2018 UP17_15975 5a2b7400268f6407ce9fe2594b10e7b1 375 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 60 365 5.2E-98 T 11-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_15975 5a2b7400268f6407ce9fe2594b10e7b1 375 Gene3D G3DSA:1.20.5.170 49 93 4.6E-13 T 11-10-2018 UP17_15975 5a2b7400268f6407ce9fe2594b10e7b1 375 SUPERFAMILY SSF52540 51 368 1.67E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 SUPERFAMILY SSF51735 1 251 1.22E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 Gene3D G3DSA:3.40.50.720 1 253 9.1E-79 T 11-10-2018 UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13475 9a81c6054fbbe10ce3fee124ec3e2fd0 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 1.5E-59 T 11-10-2018 UP17_12385 b93dcb8e01ba1dacfa8461fbe147611f 168 Pfam PF04205 FMN-binding domain 96 163 7.7E-13 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 UP17_12385 b93dcb8e01ba1dacfa8461fbe147611f 168 SMART SM00900 91 165 6.1E-11 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 UP17_12385 b93dcb8e01ba1dacfa8461fbe147611f 168 Gene3D G3DSA:3.90.1010.20 116 168 4.0E-7 T 11-10-2018 UP17_08180 4ae086a40d1adeb07fb31f1bb37c06c5 265 SUPERFAMILY SSF56300 1 257 3.16E-87 T 11-10-2018 UP17_08180 4ae086a40d1adeb07fb31f1bb37c06c5 265 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 263 4.0E-112 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like UP17_08180 4ae086a40d1adeb07fb31f1bb37c06c5 265 Pfam PF13277 YmdB-like protein 4 255 1.2E-110 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like UP17_08180 4ae086a40d1adeb07fb31f1bb37c06c5 265 Gene3D G3DSA:3.60.21.10 1 265 6.9E-116 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_08180 4ae086a40d1adeb07fb31f1bb37c06c5 265 PIRSF PIRSF004789 1 263 3.0E-105 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like UP17_01425 61497551e7b2e32081bbc1b3eb01ee2f 203 SMART SM00331 10 200 1.0E-18 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01425 61497551e7b2e32081bbc1b3eb01ee2f 203 SUPERFAMILY SSF81606 25 160 2.35E-11 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01425 61497551e7b2e32081bbc1b3eb01ee2f 203 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 38 160 2.9E-6 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01425 61497551e7b2e32081bbc1b3eb01ee2f 203 Gene3D G3DSA:3.60.40.10 3 200 5.6E-31 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_18210 36214b03d92c58e31fa91853b28004ab 189 SUPERFAMILY SSF46785 1 57 3.47E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_18210 36214b03d92c58e31fa91853b28004ab 189 SMART SM00345 1 53 4.1E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18210 36214b03d92c58e31fa91853b28004ab 189 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 13 27 1.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18210 36214b03d92c58e31fa91853b28004ab 189 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 43 1.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18210 36214b03d92c58e31fa91853b28004ab 189 Pfam PF00392 Bacterial regulatory proteins, gntR family 1 53 3.8E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18210 36214b03d92c58e31fa91853b28004ab 189 SUPERFAMILY SSF48008 77 182 7.85E-7 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_18210 36214b03d92c58e31fa91853b28004ab 189 Gene3D G3DSA:1.10.10.10 1 114 5.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15360 3d1792c70095ee5fa4689273859ae581 428 SUPERFAMILY SSF55205 7 426 3.27E-141 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 PIRSF PIRSF000505 1 428 5.4E-121 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 427 3.3E-136 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 Gene3D G3DSA:3.65.10.10 15 422 3.1E-158 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 Gene3D G3DSA:3.65.10.10 23 231 3.1E-158 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 428 33.601 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 423 1.8E-130 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 UP17_15360 3d1792c70095ee5fa4689273859ae581 428 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 UP17_07040 4e16249454f58bdec6f428646754bba3 206 Hamap MF_01851 UPF0637 protein . 5 205 38.568 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 UP17_07040 4e16249454f58bdec6f428646754bba3 206 Gene3D G3DSA:3.30.930.20 2 206 6.0E-88 T 11-10-2018 UP17_07040 4e16249454f58bdec6f428646754bba3 206 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 2.3E-85 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 UP17_07040 4e16249454f58bdec6f428646754bba3 206 SUPERFAMILY SSF142913 5 205 1.65E-82 T 11-10-2018 UP17_07040 4e16249454f58bdec6f428646754bba3 206 PIRSF PIRSF021332 1 206 2.1E-85 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 UP17_20385 a419829c830b2773e12348cede281f56 290 PIRSF PIRSF002854 1 271 2.0E-95 T 11-10-2018 IPR004872 Lipoprotein NlpA family UP17_20385 a419829c830b2773e12348cede281f56 290 Gene3D G3DSA:3.40.190.10 113 221 1.6E-89 T 11-10-2018 UP17_20385 a419829c830b2773e12348cede281f56 290 Pfam PF03180 NLPA lipoprotein 36 269 2.9E-87 T 11-10-2018 IPR004872 Lipoprotein NlpA family UP17_20385 a419829c830b2773e12348cede281f56 290 SUPERFAMILY SSF53850 35 276 8.15E-81 T 11-10-2018 UP17_20385 a419829c830b2773e12348cede281f56 290 Gene3D G3DSA:3.40.190.10 37 261 1.6E-89 T 11-10-2018 UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 446 2.7E-163 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 PIRSF PIRSF000521 22 449 9.4E-42 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 Pfam PF00202 Aminotransferase class-III 29 446 1.3E-121 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 Gene3D G3DSA:3.40.640.10 64 344 3.9E-167 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 SUPERFAMILY SSF53383 9 448 1.11E-131 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 449 52.018 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_21825 bb7d3dc88c561390829fcf82a5c5a598 460 Gene3D G3DSA:3.90.1150.10 10 446 3.9E-167 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_08545 310a0e8465507b79505968540dfbe476 168 Pfam PF00210 Ferritin-like domain 7 141 8.1E-32 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 UP17_08545 310a0e8465507b79505968540dfbe476 168 SUPERFAMILY SSF47240 1 159 1.82E-42 T 11-10-2018 IPR009078 Ferritin-like superfamily UP17_08545 310a0e8465507b79505968540dfbe476 168 Gene3D G3DSA:1.20.1260.10 1 166 1.7E-39 T 11-10-2018 IPR012347 Ferritin-like UP17_05935 e01bda01337b753a66479478d492e794 240 Gene3D G3DSA:3.40.50.1820 14 216 7.3E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_05935 e01bda01337b753a66479478d492e794 240 SUPERFAMILY SSF53474 49 143 1.74E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_06770 ae0fa9d3ebeb39b5205e24291bfc2972 164 Gene3D G3DSA:1.10.10.10 26 162 2.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_06770 ae0fa9d3ebeb39b5205e24291bfc2972 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 159 2.2E-22 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_06770 ae0fa9d3ebeb39b5205e24291bfc2972 164 SUPERFAMILY SSF88946 5 72 1.35E-10 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_06770 ae0fa9d3ebeb39b5205e24291bfc2972 164 SUPERFAMILY SSF88659 108 157 5.61E-9 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_06770 ae0fa9d3ebeb39b5205e24291bfc2972 164 Pfam PF04542 Sigma-70 region 2 11 72 1.4E-8 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_04425 a4827881c5e14e15a5595246c9e759ff 249 PIRSF PIRSF005426 1 249 2.8E-85 T 11-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 UP17_04425 a4827881c5e14e15a5595246c9e759ff 249 SUPERFAMILY SSF55469 2 247 1.31E-67 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_04425 a4827881c5e14e15a5595246c9e759ff 249 Gene3D G3DSA:3.40.109.10 1 249 2.3E-75 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_04425 a4827881c5e14e15a5595246c9e759ff 249 Pfam PF00881 Nitroreductase family 8 165 6.1E-22 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_16865 5e8d16a404fb4e3fc10074b470bbb4f5 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 2.0E-38 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 UP17_16865 5e8d16a404fb4e3fc10074b470bbb4f5 96 SMART SM01103 2 85 8.2E-41 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 UP17_16865 5e8d16a404fb4e3fc10074b470bbb4f5 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 8.8E-22 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 UP17_16865 5e8d16a404fb4e3fc10074b470bbb4f5 96 Gene3D G3DSA:3.30.110.60 1 96 3.4E-37 T 11-10-2018 IPR035920 YhbY-like superfamily UP17_16865 5e8d16a404fb4e3fc10074b470bbb4f5 96 SUPERFAMILY SSF75471 1 94 4.32E-31 T 11-10-2018 IPR035920 YhbY-like superfamily UP17_16865 5e8d16a404fb4e3fc10074b470bbb4f5 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 1.0E-40 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 Gene3D G3DSA:2.60.200.20 3 120 6.2E-20 T 11-10-2018 UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 SUPERFAMILY SSF49879 20 111 1.4E-21 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 SMART SM00240 28 81 2.3E-9 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 Gene3D G3DSA:1.10.10.10 124 224 2.9E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 SUPERFAMILY SSF46894 135 218 1.96E-9 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 Pfam PF00498 FHA domain 30 97 1.7E-13 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 217 7.9E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_20690 a3b84c75925a0eafdda38c654b4d361d 229 SMART SM00862 141 218 5.0E-6 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_25085 caa5962941d472e125d706d592e7a5ec 424 Pfam PF02371 Transposase IS116/IS110/IS902 family 291 375 6.0E-18 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 UP17_25085 caa5962941d472e125d706d592e7a5ec 424 Pfam PF01548 Transposase 23 183 5.3E-35 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 UP17_03280 caa5962941d472e125d706d592e7a5ec 424 Pfam PF02371 Transposase IS116/IS110/IS902 family 291 375 6.0E-18 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 UP17_03280 caa5962941d472e125d706d592e7a5ec 424 Pfam PF01548 Transposase 23 183 5.3E-35 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 UP17_13225 646335d2944714110aa4216261ec2ce4 199 Pfam PF00929 Exonuclease 7 166 2.0E-13 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_13225 646335d2944714110aa4216261ec2ce4 199 Gene3D G3DSA:3.30.420.10 2 170 9.0E-25 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_13225 646335d2944714110aa4216261ec2ce4 199 SMART SM00479 7 176 1.3E-14 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_13225 646335d2944714110aa4216261ec2ce4 199 SUPERFAMILY SSF53098 7 172 1.01E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_13020 146ed05edbe7599fcf556ad5a8068a11 748 Gene3D G3DSA:3.40.50.300 105 392 2.1E-42 T 11-10-2018 UP17_13020 146ed05edbe7599fcf556ad5a8068a11 748 Gene3D G3DSA:3.40.50.300 409 621 7.7E-33 T 11-10-2018 UP17_13020 146ed05edbe7599fcf556ad5a8068a11 748 Pfam PF13087 AAA domain 399 584 2.0E-26 T 11-10-2018 UP17_13020 146ed05edbe7599fcf556ad5a8068a11 748 SMART SM00382 158 388 0.0014 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13020 146ed05edbe7599fcf556ad5a8068a11 748 SUPERFAMILY SSF52540 157 645 7.47E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13020 146ed05edbe7599fcf556ad5a8068a11 748 Pfam PF13086 AAA domain 147 366 1.3E-25 T 11-10-2018 UP17_02665 370cc03eedb6bc63dee8803f663f0eb2 408 Gene3D G3DSA:1.20.1530.20 2 385 4.0E-66 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily UP17_02665 370cc03eedb6bc63dee8803f663f0eb2 408 Pfam PF00999 Sodium/hydrogen exchanger family 13 377 2.2E-61 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 UP17_09180 68dd2ef99739c204991e6cb149ff7d45 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 138 1.9E-29 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 1.6E-14 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Gene3D G3DSA:1.10.132.30 657 794 6.2E-60 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1192 18.557 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Gene3D G3DSA:1.10.1790.20 950 1128 8.3E-63 T 11-10-2018 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Gene3D G3DSA:2.40.50.100 966 1029 8.3E-63 T 11-10-2018 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 SMART SM00663 224 503 1.9E-185 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 474 4.0E-38 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Gene3D G3DSA:1.10.150.390 1130 1189 3.7E-28 T 11-10-2018 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 2.2E-35 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Gene3D G3DSA:1.10.40.90 363 405 4.2E-23 T 11-10-2018 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 SUPERFAMILY SSF64484 5 1181 0.0 T 11-10-2018 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Gene3D G3DSA:1.10.274.100 479 656 5.2E-46 T 11-10-2018 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 9.0E-91 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1129 6.3E-67 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_00655 005c81457f4fc6486088bf35bf8b97ec 1199 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_23575 3e22cf5eb355e41909d116c9839f7920 395 Gene3D G3DSA:3.40.50.12590 329 395 3.3E-15 T 11-10-2018 UP17_23575 3e22cf5eb355e41909d116c9839f7920 395 SUPERFAMILY SSF55681 7 324 3.68E-66 T 11-10-2018 UP17_23575 3e22cf5eb355e41909d116c9839f7920 395 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 374 31.921 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UP17_23575 3e22cf5eb355e41909d116c9839f7920 395 Gene3D G3DSA:3.30.930.10 1 325 2.4E-106 T 11-10-2018 UP17_23575 3e22cf5eb355e41909d116c9839f7920 395 PIRSF PIRSF001549 3 380 8.7E-88 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 UP17_23575 3e22cf5eb355e41909d116c9839f7920 395 Pfam PF13393 Histidyl-tRNA synthetase 12 320 1.6E-76 T 11-10-2018 UP17_23575 3e22cf5eb355e41909d116c9839f7920 395 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 324 4.4E-98 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UP17_18695 b5b2c3fa5618ab4b4b44e500d244309d 254 Pfam PF09323 Domain of unknown function (DUF1980) 9 120 3.1E-20 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 UP17_18695 b5b2c3fa5618ab4b4b44e500d244309d 254 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 26 245 7.0E-50 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 SMART SM00357 3 66 1.1E-32 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 SUPERFAMILY SSF50249 1 64 1.44E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 PIRSF PIRSF002599 1 66 2.5E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.2E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 PRINTS PR00050 Cold shock protein signature 24 33 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 PRINTS PR00050 Cold shock protein signature 39 57 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 PRINTS PR00050 Cold shock protein signature 4 19 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_01040 47401ae6451d5ea01ab6e85d742dfc1d 66 Gene3D G3DSA:2.40.50.140 1 66 1.4E-30 T 11-10-2018 UP17_20410 c8dc429312e9a3283c23b2887d6ab473 122 Gene3D G3DSA:3.10.450.50 3 117 2.2E-12 T 11-10-2018 UP17_20410 c8dc429312e9a3283c23b2887d6ab473 122 Pfam PF14534 Domain of unknown function (DUF4440) 12 110 1.4E-10 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 UP17_20410 c8dc429312e9a3283c23b2887d6ab473 122 SUPERFAMILY SSF54427 7 117 4.76E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily UP17_03595 19b353543da8418d118d46d7c3fb5e77 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 123 4.2E-29 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 UP17_03595 19b353543da8418d118d46d7c3fb5e77 234 Gene3D G3DSA:1.10.3720.10 21 231 1.5E-52 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03595 19b353543da8418d118d46d7c3fb5e77 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 229 1.8E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_03595 19b353543da8418d118d46d7c3fb5e77 234 SUPERFAMILY SSF161098 28 214 3.92E-45 T 11-10-2018 IPR035906 MetI-like superfamily UP17_10855 9400121d961bf40f949121888063ea7f 367 Pfam PF01979 Amidohydrolase family 50 363 4.2E-8 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_10855 9400121d961bf40f949121888063ea7f 367 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 5 365 1.3E-156 T 11-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 UP17_10855 9400121d961bf40f949121888063ea7f 367 Gene3D G3DSA:2.30.40.10 6 363 3.7E-107 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_10855 9400121d961bf40f949121888063ea7f 367 Gene3D G3DSA:3.20.20.140 53 317 3.7E-107 T 11-10-2018 UP17_10855 9400121d961bf40f949121888063ea7f 367 SUPERFAMILY SSF51556 53 317 2.98E-63 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_10855 9400121d961bf40f949121888063ea7f 367 PIRSF PIRSF039004 1 367 2.1E-124 T 11-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 UP17_10855 9400121d961bf40f949121888063ea7f 367 SUPERFAMILY SSF51338 4 365 3.39E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_12870 14b816684a3c509a152cd103d7d8fe9b 368 SUPERFAMILY SSF51161 287 350 9.42E-10 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_12870 14b816684a3c509a152cd103d7d8fe9b 368 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 3 367 2.5E-119 T 11-10-2018 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 UP17_12870 14b816684a3c509a152cd103d7d8fe9b 368 Pfam PF00483 Nucleotidyl transferase 17 148 4.3E-11 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 UP17_12870 14b816684a3c509a152cd103d7d8fe9b 368 Gene3D G3DSA:3.90.550.10 1 269 1.3E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_12870 14b816684a3c509a152cd103d7d8fe9b 368 SUPERFAMILY SSF53448 17 317 1.46E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_12870 14b816684a3c509a152cd103d7d8fe9b 368 Gene3D G3DSA:2.160.10.10 270 367 5.8E-23 T 11-10-2018 UP17_12970 89bb56be0a587cf21a7d98ff38c2db1c 177 SUPERFAMILY SSF52218 4 173 4.81E-29 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_12970 89bb56be0a587cf21a7d98ff38c2db1c 177 Pfam PF03358 NADPH-dependent FMN reductase 3 139 6.4E-29 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 UP17_12970 89bb56be0a587cf21a7d98ff38c2db1c 177 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 4 171 2.7E-56 T 11-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 UP17_12970 89bb56be0a587cf21a7d98ff38c2db1c 177 Gene3D G3DSA:3.40.50.360 2 177 2.8E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_14300 ae6975678c68cdd4a61feacb719dbb0f 324 PIRSF PIRSF028757 1 324 8.6E-84 T 11-10-2018 IPR003507 Peptidase family S66 UP17_14300 ae6975678c68cdd4a61feacb719dbb0f 324 SUPERFAMILY SSF141986 165 316 2.62E-37 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily UP17_14300 ae6975678c68cdd4a61feacb719dbb0f 324 Pfam PF02016 LD-carboxypeptidase 12 310 3.6E-76 T 11-10-2018 IPR003507 Peptidase family S66 UP17_14300 ae6975678c68cdd4a61feacb719dbb0f 324 SUPERFAMILY SSF52317 1 162 1.42E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_14300 ae6975678c68cdd4a61feacb719dbb0f 324 Gene3D G3DSA:3.40.50.10740 1 158 9.9E-59 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal UP17_14300 ae6975678c68cdd4a61feacb719dbb0f 324 Gene3D G3DSA:3.50.30.60 159 323 1.5E-53 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily UP17_12925 1d377db894d45854d3517e28339abf2c 300 Pfam PF01925 Sulfite exporter TauE/SafE 7 249 1.5E-40 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 SUPERFAMILY SSF143800 2 80 1.37E-22 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 26.535 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 Gene3D G3DSA:2.30.170.50 1 82 1.4E-23 T 11-10-2018 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 TIGRFAM TIGR00105 L31: ribosomal protein bL31 2 81 3.5E-19 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 Pfam PF01197 Ribosomal protein L31 2 79 1.1E-26 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.0E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.0E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_05335 8ad89ef96176855be3746a4f2e51861f 82 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.0E-18 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_05745 7f60061da74f6f8f0aa21365d4b8a0cd 73 Pfam PF10676 Spore germination protein gerPA/gerPF 2 72 1.4E-27 T 11-10-2018 IPR019618 Spore germination protein GerPA/GerPF UP17_03550 8718ba84b037aa555feecac2ef9da1fd 354 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 104 311 3.0E-63 T 11-10-2018 IPR005079 Peptidase C45 UP17_03550 8718ba84b037aa555feecac2ef9da1fd 354 Gene3D G3DSA:3.60.60.10 97 308 1.1E-29 T 11-10-2018 UP17_03550 8718ba84b037aa555feecac2ef9da1fd 354 SUPERFAMILY SSF56235 109 228 6.02E-11 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 SMART SM00487 21 218 1.9E-65 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 SUPERFAMILY SSF52540 70 353 6.75E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 Pfam PF00271 Helicase conserved C-terminal domain 227 335 1.8E-29 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 Gene3D G3DSA:3.40.50.300 210 439 1.1E-53 T 11-10-2018 UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 Pfam PF00270 DEAD/DEAH box helicase 27 191 2.4E-48 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 2 498 44.954 T 11-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 Gene3D G3DSA:3.40.50.300 1 207 9.5E-76 T 11-10-2018 UP17_01345 42fee94a21aa98e3d8c0450f02aa8cec 499 SMART SM00490 254 335 1.1E-35 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_11780 2c40fa660b7df91d1f25476cb7a54978 208 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 82 198 6.2E-38 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal UP17_11780 2c40fa660b7df91d1f25476cb7a54978 208 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 5 72 8.1E-21 T 11-10-2018 IPR019457 Uncharacterised domain YojJ, N-terminal UP17_11780 2c40fa660b7df91d1f25476cb7a54978 208 Hamap MF_00838 Diadenylate cyclase [dacB]. 17 204 32.267 T 11-10-2018 IPR034693 Diadenylate cyclase CdaS GO:0004016|GO:0006171 UP17_11780 2c40fa660b7df91d1f25476cb7a54978 208 SUPERFAMILY SSF143597 42 201 7.85E-48 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily UP17_11780 2c40fa660b7df91d1f25476cb7a54978 208 Gene3D G3DSA:3.40.1700.10 73 204 6.5E-47 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily UP17_11780 2c40fa660b7df91d1f25476cb7a54978 208 Gene3D G3DSA:1.10.287.770 9 72 3.7E-8 T 11-10-2018 UP17_17500 8bfc81dce755366e28b33c3dc5901691 149 Gene3D G3DSA:3.30.70.260 70 147 5.6E-7 T 11-10-2018 UP17_17500 8bfc81dce755366e28b33c3dc5901691 149 SUPERFAMILY SSF55021 72 145 4.01E-11 T 11-10-2018 UP17_17500 8bfc81dce755366e28b33c3dc5901691 149 Hamap MF_00707 UPF0735 ACT domain-containing protein . 4 148 32.598 T 11-10-2018 IPR008310 UPF0735 ACT domain-containing protein UP17_17500 8bfc81dce755366e28b33c3dc5901691 149 PIRSF PIRSF025624 1 148 9.9E-60 T 11-10-2018 IPR008310 UPF0735 ACT domain-containing protein UP17_07175 479b2a54d580d8a5714409cf608e17b2 149 SUPERFAMILY SSF158622 4 126 1.01E-31 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily UP17_07175 479b2a54d580d8a5714409cf608e17b2 149 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 10 115 2.8E-19 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA UP17_07175 479b2a54d580d8a5714409cf608e17b2 149 Gene3D G3DSA:1.20.1500.10 4 126 2.8E-27 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily UP17_24220 5e06052b1d028a1438b78c86aeebd15e 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 141 6.1E-27 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I UP17_24220 5e06052b1d028a1438b78c86aeebd15e 147 Gene3D G3DSA:3.40.50.2300 1 147 2.0E-49 T 11-10-2018 UP17_24220 5e06052b1d028a1438b78c86aeebd15e 147 SUPERFAMILY SSF52788 1 142 4.19E-35 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily UP17_24220 5e06052b1d028a1438b78c86aeebd15e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 1.4E-9 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 UP17_24220 5e06052b1d028a1438b78c86aeebd15e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 1.4E-9 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 UP17_24220 5e06052b1d028a1438b78c86aeebd15e 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.4E-9 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 UP17_24220 5e06052b1d028a1438b78c86aeebd15e 147 SMART SM00226 2 144 1.5E-29 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I UP17_21850 22212c8f4c0465b0a2bdc5e2a609984a 289 Pfam PF11738 Protein of unknown function (DUF3298) 194 275 4.9E-21 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 UP17_21850 22212c8f4c0465b0a2bdc5e2a609984a 289 Gene3D G3DSA:3.90.640.20 191 289 5.4E-40 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily UP17_21850 22212c8f4c0465b0a2bdc5e2a609984a 289 Gene3D G3DSA:3.30.565.40 77 190 5.2E-27 T 11-10-2018 UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 Gene3D G3DSA:3.40.50.1220 193 348 1.8E-45 T 11-10-2018 UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 SUPERFAMILY SSF52518 11 182 7.85E-39 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 Gene3D G3DSA:3.40.50.970 3 187 8.1E-65 T 11-10-2018 UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 PIRSF PIRSF036565 7 562 1.6E-179 T 11-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 204 322 3.0E-26 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 536 9.4E-24 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 Gene3D G3DSA:3.40.50.970 357 553 4.6E-58 T 11-10-2018 UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 SUPERFAMILY SSF52467 199 339 5.84E-32 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 SUPERFAMILY SSF52518 362 542 6.97E-45 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_04570 8fc17e67cedd98c7ebdef070d6111197 563 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 182 1.4E-36 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 PIRSF PIRSF000429 1 383 2.0E-127 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 SUPERFAMILY SSF53901 3 259 1.92E-80 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 SUPERFAMILY SSF53901 260 381 4.22E-40 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 380 1.4E-133 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 ProSitePatterns PS00737 Thiolases signature 2. 328 344 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 Gene3D G3DSA:3.40.47.10 6 265 1.9E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 Gene3D G3DSA:3.40.47.10 127 379 1.9E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 Pfam PF02803 Thiolase, C-terminal domain 260 381 9.5E-42 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 UP17_03745 1bb2d2281235e9b8355f38d079516949 383 Pfam PF00108 Thiolase, N-terminal domain 4 252 1.5E-76 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 UP17_18505 c0be13e8994c019fdfbacdac57b2f152 268 Hamap MF_01548 UPF0354 protein . 3 267 46.845 T 11-10-2018 IPR010838 Protein of unknown unction DUF1444 UP17_18505 c0be13e8994c019fdfbacdac57b2f152 268 PIRSF PIRSF012562 1 267 2.0E-131 T 11-10-2018 IPR010838 Protein of unknown unction DUF1444 UP17_18505 c0be13e8994c019fdfbacdac57b2f152 268 Pfam PF07285 Protein of unknown function (DUF1444) 3 265 1.0E-128 T 11-10-2018 IPR010838 Protein of unknown unction DUF1444 UP17_04370 1633fdbcadc7ba4ce8bdc3ef0464dbe7 445 SUPERFAMILY SSF53474 148 435 6.99E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_04370 1633fdbcadc7ba4ce8bdc3ef0464dbe7 445 Pfam PF12146 Serine aminopeptidase, S33 197 398 5.5E-17 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 UP17_04370 1633fdbcadc7ba4ce8bdc3ef0464dbe7 445 Gene3D G3DSA:3.40.50.1820 151 418 3.9E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_04890 765fcf5535f0db8119f41c7ac04e23b8 442 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 435 5.2E-25 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal UP17_04890 765fcf5535f0db8119f41c7ac04e23b8 442 Pfam PF00501 AMP-binding enzyme 89 333 1.7E-10 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_04890 765fcf5535f0db8119f41c7ac04e23b8 442 Gene3D G3DSA:3.40.50.12780 2 325 2.5E-131 T 11-10-2018 UP17_04890 765fcf5535f0db8119f41c7ac04e23b8 442 SUPERFAMILY SSF56801 25 399 4.06E-57 T 11-10-2018 UP17_04890 765fcf5535f0db8119f41c7ac04e23b8 442 PIRSF PIRSF006444 1 437 4.7E-194 T 11-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 UP17_04890 765fcf5535f0db8119f41c7ac04e23b8 442 Gene3D G3DSA:3.30.300.30 326 437 4.6E-29 T 11-10-2018 UP17_11005 0c0a9a9e3694c4fd9f6ed3d640c3a9fb 409 SUPERFAMILY SSF103473 13 401 5.1E-47 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_11005 0c0a9a9e3694c4fd9f6ed3d640c3a9fb 409 Pfam PF07690 Major Facilitator Superfamily 19 366 2.7E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_11005 0c0a9a9e3694c4fd9f6ed3d640c3a9fb 409 Gene3D G3DSA:1.20.1250.20 12 399 3.4E-44 T 11-10-2018 UP17_03075 9cbda82243a5159b867a56e42e690c01 618 Pfam PF12697 Alpha/beta hydrolase family 382 608 3.8E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_03075 9cbda82243a5159b867a56e42e690c01 618 Pfam PF07993 Male sterility protein 6 239 3.3E-39 T 11-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 UP17_03075 9cbda82243a5159b867a56e42e690c01 618 SUPERFAMILY SSF51735 1 294 3.5E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03075 9cbda82243a5159b867a56e42e690c01 618 Gene3D G3DSA:3.40.50.1820 351 615 4.9E-22 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_03075 9cbda82243a5159b867a56e42e690c01 618 Gene3D G3DSA:3.40.50.720 1 324 4.0E-41 T 11-10-2018 UP17_03075 9cbda82243a5159b867a56e42e690c01 618 SUPERFAMILY SSF53474 370 611 3.11E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_01140 030f579498e1c7986a446565bd3bd234 298 Gene3D G3DSA:3.10.50.40 159 250 3.7E-50 T 11-10-2018 UP17_01140 030f579498e1c7986a446565bd3bd234 298 Gene3D G3DSA:1.10.4030.30 32 274 3.7E-50 T 11-10-2018 UP17_01140 030f579498e1c7986a446565bd3bd234 298 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 187 208 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 UP17_01140 030f579498e1c7986a446565bd3bd234 298 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 76 126 6.9E-7 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 UP17_01140 030f579498e1c7986a446565bd3bd234 298 SUPERFAMILY SSF54534 141 247 1.18E-31 T 11-10-2018 UP17_01140 030f579498e1c7986a446565bd3bd234 298 SUPERFAMILY SSF109998 34 188 1.96E-28 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily UP17_01140 030f579498e1c7986a446565bd3bd234 298 Pfam PF13616 PPIC-type PPIASE domain 157 250 1.5E-26 T 11-10-2018 UP17_18840 772537e0856460642b651ba68e73b905 123 Gene3D G3DSA:1.10.10.10 1 109 3.2E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18840 772537e0856460642b651ba68e73b905 123 Pfam PF01638 HxlR-like helix-turn-helix 16 104 3.2E-39 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type UP17_18840 772537e0856460642b651ba68e73b905 123 SUPERFAMILY SSF46785 10 102 6.25E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_00375 13400fd07b190acb1b7f4c08d0a6bd70 824 SMART SM00332 585 802 0.0012 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_00375 13400fd07b190acb1b7f4c08d0a6bd70 824 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 621 803 2.5E-32 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_00375 13400fd07b190acb1b7f4c08d0a6bd70 824 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 47 804 2.8E-261 T 11-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_00375 13400fd07b190acb1b7f4c08d0a6bd70 824 SUPERFAMILY SSF81606 598 801 1.19E-17 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_00375 13400fd07b190acb1b7f4c08d0a6bd70 824 Gene3D G3DSA:3.60.40.10 587 824 1.8E-49 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_00375 13400fd07b190acb1b7f4c08d0a6bd70 824 SMART SM00331 593 804 4.1E-47 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_22995 3311746890aa4d23a1449230a5808e0d 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 105 2.7E-20 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 UP17_22995 3311746890aa4d23a1449230a5808e0d 120 Gene3D G3DSA:2.60.300.12 4 113 6.8E-35 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_22995 3311746890aa4d23a1449230a5808e0d 120 SUPERFAMILY SSF89360 4 98 3.14E-28 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_22995 3311746890aa4d23a1449230a5808e0d 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 109 1.4E-36 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 UP17_22995 3311746890aa4d23a1449230a5808e0d 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 UP17_20015 08d45a3d0f51c31805ba96e8c98e7ead 907 SUPERFAMILY SSF52540 160 362 1.43E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20015 08d45a3d0f51c31805ba96e8c98e7ead 907 Pfam PF10593 Z1 domain 432 657 3.5E-69 T 11-10-2018 IPR018310 Putative endonuclease, Z1 domain UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 Pfam PF02602 Uroporphyrinogen-III synthase HemD 373 477 3.0E-9 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 Gene3D G3DSA:3.40.50.10090 368 479 5.2E-12 T 11-10-2018 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 214 2.0E-42 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 SUPERFAMILY SSF53790 2 253 7.46E-73 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 PIRSF PIRSF036426 1 253 1.3E-92 T 11-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 Gene3D G3DSA:3.40.50.10090 245 367 3.7E-11 T 11-10-2018 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 Gene3D G3DSA:3.30.950.10 120 244 1.8E-39 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 Gene3D G3DSA:3.40.1010.10 2 119 6.2E-42 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 237 7.9E-89 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_18630 ba1d83c4d7e0b425a06f438c11382633 481 SUPERFAMILY SSF69618 251 477 3.01E-21 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_14905 23cc21ed011cc043d0eb94e02ffbfa78 526 Pfam PF03609 PTS system sorbose-specific iic component 4 234 1.5E-74 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 UP17_14905 23cc21ed011cc043d0eb94e02ffbfa78 526 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 263 526 9.7E-92 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 UP17_18535 31dd30c9b7a830d1a3cdff9158c14420 357 PIRSF PIRSF001123 2 356 4.5E-150 T 11-10-2018 IPR008007 Peptidase M42 UP17_18535 31dd30c9b7a830d1a3cdff9158c14420 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 2.8E-111 T 11-10-2018 IPR008007 Peptidase M42 UP17_18535 31dd30c9b7a830d1a3cdff9158c14420 357 Gene3D G3DSA:3.40.630.10 10 338 4.1E-117 T 11-10-2018 UP17_18535 31dd30c9b7a830d1a3cdff9158c14420 357 SUPERFAMILY SSF101821 71 180 1.83E-31 T 11-10-2018 UP17_18535 31dd30c9b7a830d1a3cdff9158c14420 357 Gene3D G3DSA:2.40.30.40 75 162 4.1E-117 T 11-10-2018 IPR023367 Peptidase M42, domain 2 UP17_18535 31dd30c9b7a830d1a3cdff9158c14420 357 SUPERFAMILY SSF53187 4 351 1.4E-70 T 11-10-2018 UP17_11985 a3c56a222782b1cb2340ccc3d1ffdee3 87 SUPERFAMILY SSF56281 31 79 1.15E-5 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_18955 513b01651060d5368a792d9287eecf86 207 Pfam PF05908 Poly-gamma-glutamate hydrolase 4 195 1.8E-59 T 11-10-2018 IPR008585 Poly-gamma-glutamate hydrolase UP17_18955 513b01651060d5368a792d9287eecf86 207 Gene3D G3DSA:3.40.630.100 1 207 6.4E-67 T 11-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 Pfam PF02607 B12 binding domain 97 164 1.1E-10 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 Gene3D G3DSA:3.40.50.280 177 291 2.4E-15 T 11-10-2018 UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 Gene3D G3DSA:1.10.1660.10 1 73 8.9E-23 T 11-10-2018 UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 SUPERFAMILY SSF46955 6 103 7.33E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 SUPERFAMILY SSF52242 178 276 2.35E-12 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 Gene3D G3DSA:1.10.1240.10 94 170 3.9E-21 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 Pfam PF13411 MerR HTH family regulatory protein 6 74 1.4E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 Pfam PF02310 B12 binding domain 179 276 1.6E-8 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_15550 eeb182807e13cd6610b42244c40ca9fb 297 SMART SM00422 6 75 2.3E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 SUPERFAMILY SSF51735 6 251 3.64E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 Gene3D G3DSA:3.40.50.720 1 261 1.2E-88 T 11-10-2018 UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_04525 73b86d34b341ff24501ca7b4540fe02f 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 7.2E-66 T 11-10-2018 UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 SUPERFAMILY SSF46894 129 230 4.54E-32 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 Gene3D G3DSA:1.10.10.10 130 235 1.1E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-40 T 11-10-2018 UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 Pfam PF00072 Response regulator receiver domain 5 114 3.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 SMART SM00862 153 229 1.2E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 SMART SM00448 3 113 2.5E-48 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 SUPERFAMILY SSF52172 2 124 6.4E-44 T 11-10-2018 IPR011006 CheY-like superfamily UP17_24900 52a47a46c3c5a17f5bcfaf2f9a9c9185 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 2.2E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_10515 024d26b06e2da11bfbb8bbffca004582 260 SUPERFAMILY SSF56529 5 259 1.57E-67 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_10515 024d26b06e2da11bfbb8bbffca004582 260 Gene3D G3DSA:3.90.850.10 3 259 7.0E-74 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_10515 024d26b06e2da11bfbb8bbffca004582 260 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 100 255 4.8E-9 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 UP17_14375 206449ab4e13eeb4fa7f6702cf70a56a 243 Gene3D G3DSA:3.40.390.10 138 243 1.4E-15 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 UP17_14375 206449ab4e13eeb4fa7f6702cf70a56a 243 SUPERFAMILY SSF55486 84 242 1.35E-29 T 11-10-2018 UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 SUPERFAMILY SSF48557 3 458 1.57E-149 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 Pfam PF00206 Lyase 11 340 1.4E-113 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 87.61 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 Gene3D G3DSA:1.10.275.10 4 136 4.2E-55 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 Gene3D G3DSA:1.10.40.30 406 460 7.9E-27 T 11-10-2018 UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 Pfam PF10415 Fumarase C C-terminus 406 459 1.5E-24 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 Gene3D G3DSA:1.20.200.10 137 404 2.0E-110 T 11-10-2018 UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 UP17_05350 104242bdb75edef3b69505e0a050dbd6 460 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 2.1E-232 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_20000 794fa4acee1383e6e6a32b2ee544e938 147 Pfam PF04480 Protein of unknown function (DUF559) 90 132 9.8E-5 T 11-10-2018 IPR007569 Protein of unknown function DUF559 UP17_20000 794fa4acee1383e6e6a32b2ee544e938 147 PIRSF PIRSF018267 1 144 6.1E-49 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 UP17_20000 794fa4acee1383e6e6a32b2ee544e938 147 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 116 1.8E-39 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 UP17_20000 794fa4acee1383e6e6a32b2ee544e938 147 Pfam PF03852 DNA mismatch endonuclease Vsr 2 68 1.9E-23 T 11-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 UP17_20000 794fa4acee1383e6e6a32b2ee544e938 147 Gene3D G3DSA:3.40.960.10 21 147 8.4E-41 T 11-10-2018 UP17_20000 794fa4acee1383e6e6a32b2ee544e938 147 SUPERFAMILY SSF52980 3 137 1.97E-44 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 UP17_24010 2670a76903eb6ab86338c16e048df210 120 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 33.244 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 UP17_24010 2670a76903eb6ab86338c16e048df210 120 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 108 8.1E-39 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 UP17_24010 2670a76903eb6ab86338c16e048df210 120 PIRSF PIRSF002070 1 117 1.6E-35 T 11-10-2018 UP17_24010 2670a76903eb6ab86338c16e048df210 120 Gene3D G3DSA:2.40.50.140 1 111 1.3E-45 T 11-10-2018 UP17_24010 2670a76903eb6ab86338c16e048df210 120 SUPERFAMILY SSF50249 1 108 9.14E-43 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_24010 2670a76903eb6ab86338c16e048df210 120 Pfam PF00436 Single-strand binding protein family 2 103 8.9E-36 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 UP17_04420 d04d91727c1a37966af482a7b8a73596 162 Pfam PF00588 SpoU rRNA Methylase family 3 145 9.5E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 UP17_04420 d04d91727c1a37966af482a7b8a73596 162 SUPERFAMILY SSF75217 3 155 1.05E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases UP17_04420 d04d91727c1a37966af482a7b8a73596 162 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 3 156 1.6E-67 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 UP17_04420 d04d91727c1a37966af482a7b8a73596 162 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 154 34.887 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 UP17_04420 d04d91727c1a37966af482a7b8a73596 162 PIRSF PIRSF029256 2 157 1.6E-67 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 UP17_04420 d04d91727c1a37966af482a7b8a73596 162 Gene3D G3DSA:3.40.1280.10 1 161 3.7E-69 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UP17_25780 74aba6f712292ddf307dd4aa35e67ed5 202 SUPERFAMILY SSF53448 1 194 6.76E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_25780 74aba6f712292ddf307dd4aa35e67ed5 202 Gene3D G3DSA:3.90.550.10 1 194 1.6E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_25780 74aba6f712292ddf307dd4aa35e67ed5 202 Pfam PF12804 MobA-like NTP transferase domain 3 164 2.0E-22 T 11-10-2018 IPR025877 MobA-like NTP transferase UP17_19165 8e37666c73914c646b2d5a2725a60536 647 Gene3D G3DSA:3.40.930.10 504 644 2.6E-42 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_19165 8e37666c73914c646b2d5a2725a60536 647 Gene3D G3DSA:3.40.50.2300 369 469 2.0E-37 T 11-10-2018 UP17_19165 8e37666c73914c646b2d5a2725a60536 647 SUPERFAMILY SSF55804 506 642 8.76E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_19165 8e37666c73914c646b2d5a2725a60536 647 SUPERFAMILY SSF52794 379 467 1.44E-25 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_19165 8e37666c73914c646b2d5a2725a60536 647 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 10 347 6.3E-165 T 11-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 UP17_19165 8e37666c73914c646b2d5a2725a60536 647 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 643 3.7E-33 T 11-10-2018 IPR002178 PTS EIIA type-2 domain UP17_19165 8e37666c73914c646b2d5a2725a60536 647 Pfam PF02378 Phosphotransferase system, EIIC 19 278 2.6E-16 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_19165 8e37666c73914c646b2d5a2725a60536 647 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 464 3.0E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 UP17_19165 8e37666c73914c646b2d5a2725a60536 647 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 551 567 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain UP17_23025 c04d2a93225cd5795e1fc257af988339 314 Pfam PF00288 GHMP kinases N terminal domain 84 144 1.2E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 SUPERFAMILY SSF54211 6 153 1.82E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_23025 c04d2a93225cd5795e1fc257af988339 314 Pfam PF08544 GHMP kinases C terminal 205 282 2.0E-7 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain UP17_23025 c04d2a93225cd5795e1fc257af988339 314 SUPERFAMILY SSF55060 165 288 1.83E-33 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily UP17_23025 c04d2a93225cd5795e1fc257af988339 314 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 PRINTS PR00958 Homoserine kinase signature 249 264 1.2E-38 T 11-10-2018 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 PRINTS PR00958 Homoserine kinase signature 97 112 1.2E-38 T 11-10-2018 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 PRINTS PR00958 Homoserine kinase signature 169 186 1.2E-38 T 11-10-2018 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 PRINTS PR00958 Homoserine kinase signature 131 144 1.2E-38 T 11-10-2018 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 PRINTS PR00958 Homoserine kinase signature 15 30 1.2E-38 T 11-10-2018 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 Gene3D G3DSA:3.30.230.10 6 165 6.8E-40 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_23025 c04d2a93225cd5795e1fc257af988339 314 PIRSF PIRSF000676 5 300 2.7E-84 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 Hamap MF_00384 Homoserine kinase [thrB]. 10 299 28.503 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 TIGRFAM TIGR00191 thrB: homoserine kinase 8 297 9.3E-80 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 UP17_23025 c04d2a93225cd5795e1fc257af988339 314 Gene3D G3DSA:3.30.70.890 166 291 1.7E-35 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily UP17_17280 c6db5a63d22ef4aa3a718bd169bfcdd0 391 SUPERFAMILY SSF103473 17 390 4.45E-60 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_17280 c6db5a63d22ef4aa3a718bd169bfcdd0 391 Gene3D G3DSA:1.20.1250.20 14 387 1.0E-53 T 11-10-2018 UP17_17280 c6db5a63d22ef4aa3a718bd169bfcdd0 391 Pfam PF07690 Major Facilitator Superfamily 24 337 8.7E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_04520 c8a8166e6eec7c4d0a628d81051e694b 284 SUPERFAMILY SSF103481 195 272 1.44E-7 T 11-10-2018 UP17_04520 c8a8166e6eec7c4d0a628d81051e694b 284 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 1 283 1.4E-113 T 11-10-2018 UP17_04520 c8a8166e6eec7c4d0a628d81051e694b 284 SUPERFAMILY SSF103481 37 138 4.84E-8 T 11-10-2018 UP17_04520 c8a8166e6eec7c4d0a628d81051e694b 284 Pfam PF06800 Sugar transport protein 4 281 1.5E-110 T 11-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 UP17_12150 1df53e6635dca1cc5f9009c31cd303cc 293 Gene3D G3DSA:2.30.30.60 121 170 1.2E-16 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily UP17_12150 1df53e6635dca1cc5f9009c31cd303cc 293 SUPERFAMILY SSF50182 106 169 9.48E-10 T 11-10-2018 IPR010920 LSM domain superfamily UP17_12150 1df53e6635dca1cc5f9009c31cd303cc 293 Pfam PF00924 Mechanosensitive ion channel 68 272 4.6E-32 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 UP17_12150 1df53e6635dca1cc5f9009c31cd303cc 293 SUPERFAMILY SSF82689 171 279 2.75E-6 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 UP17_12150 1df53e6635dca1cc5f9009c31cd303cc 293 Gene3D G3DSA:3.30.70.100 171 278 5.1E-6 T 11-10-2018 UP17_12150 1df53e6635dca1cc5f9009c31cd303cc 293 SUPERFAMILY SSF82861 21 104 2.88E-9 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 UP17_19700 791f4d87b2e5d23cb0be763c8da89db2 282 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 20 275 6.4E-24 T 11-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal UP17_19700 791f4d87b2e5d23cb0be763c8da89db2 282 SUPERFAMILY SSF56784 18 280 1.28E-29 T 11-10-2018 IPR036412 HAD-like superfamily UP17_19700 791f4d87b2e5d23cb0be763c8da89db2 282 Gene3D G3DSA:3.40.50.1000 182 282 5.0E-21 T 11-10-2018 IPR023214 HAD superfamily UP17_19700 791f4d87b2e5d23cb0be763c8da89db2 282 Gene3D G3DSA:3.40.50.1000 1 146 4.6E-35 T 11-10-2018 IPR023214 HAD superfamily UP17_19700 791f4d87b2e5d23cb0be763c8da89db2 282 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 249 1.6E-19 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_15185 3a84858e86b251b2da4fd4eec29ad280 262 Gene3D G3DSA:3.90.850.10 37 249 1.2E-74 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_15185 3a84858e86b251b2da4fd4eec29ad280 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 243 2.3E-60 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 UP17_15185 3a84858e86b251b2da4fd4eec29ad280 262 SUPERFAMILY SSF56529 36 245 2.49E-71 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_15185 3a84858e86b251b2da4fd4eec29ad280 262 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 1.8E-118 T 11-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 UP17_11775 e9a6d98c0dd53647036cd380c76c5ae6 106 SUPERFAMILY SSF54292 10 90 3.53E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 UP17_11775 e9a6d98c0dd53647036cd380c76c5ae6 106 Gene3D G3DSA:3.10.20.30 4 92 1.1E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_11775 e9a6d98c0dd53647036cd380c76c5ae6 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 81 1.6E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 UP17_11975 baea817ccea18304ac9cf5ae43d5f1d5 163 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UP17_11975 baea817ccea18304ac9cf5ae43d5f1d5 163 Gene3D G3DSA:1.20.120.1760 4 121 3.2E-11 T 11-10-2018 UP17_11975 baea817ccea18304ac9cf5ae43d5f1d5 163 Pfam PF01066 CDP-alcohol phosphatidyltransferase 9 72 7.3E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UP17_11975 baea817ccea18304ac9cf5ae43d5f1d5 163 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 14 159 1.8E-36 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 UP17_12030 85354ad4809f90213e5d31a93c854b94 185 Pfam PF12804 MobA-like NTP transferase domain 1 150 1.6E-20 T 11-10-2018 IPR025877 MobA-like NTP transferase UP17_12030 85354ad4809f90213e5d31a93c854b94 185 SUPERFAMILY SSF53448 1 175 6.31E-18 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_12030 85354ad4809f90213e5d31a93c854b94 185 Gene3D G3DSA:3.90.550.10 1 182 2.5E-31 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_10690 a1de8a4d00835b88b3496ea3ac109843 302 Gene3D G3DSA:1.10.8.1080 221 298 2.3E-27 T 11-10-2018 UP17_10690 a1de8a4d00835b88b3496ea3ac109843 302 SUPERFAMILY SSF53697 8 249 8.01E-70 T 11-10-2018 UP17_10690 a1de8a4d00835b88b3496ea3ac109843 302 Pfam PF01380 SIS domain 131 210 1.1E-9 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_10690 a1de8a4d00835b88b3496ea3ac109843 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.913 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 UP17_10690 a1de8a4d00835b88b3496ea3ac109843 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 1.9E-129 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 UP17_10690 a1de8a4d00835b88b3496ea3ac109843 302 Gene3D G3DSA:3.40.50.10490 2 220 1.9E-79 T 11-10-2018 UP17_10690 a1de8a4d00835b88b3496ea3ac109843 302 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 UP17_15060 5545b019b269150d38d6bd994f32db5c 176 Gene3D G3DSA:1.20.120.1630 1 171 7.7E-19 T 11-10-2018 UP17_15060 5545b019b269150d38d6bd994f32db5c 176 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 73 164 1.8E-29 T 11-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 UP17_18660 f40df389509cb77b4daba159ac09e0b1 236 Pfam PF01323 DSBA-like thioredoxin domain 2 204 1.7E-47 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 UP17_18660 f40df389509cb77b4daba159ac09e0b1 236 SUPERFAMILY SSF52833 1 211 2.33E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_18660 f40df389509cb77b4daba159ac09e0b1 236 Gene3D G3DSA:3.40.30.10 1 208 1.5E-78 T 11-10-2018 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 SUPERFAMILY SSF53474 12 274 7.58E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 Pfam PF12697 Alpha/beta hydrolase family 31 268 1.3E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 5.0E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 Gene3D G3DSA:3.40.50.1820 7 278 1.2E-61 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 PRINTS PR00412 Epoxide hydrolase signature 35 53 8.8E-8 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 PRINTS PR00412 Epoxide hydrolase signature 251 273 8.8E-8 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_22815 7b6042604daf9b9dc39eabd2c724c5d5 280 PRINTS PR00412 Epoxide hydrolase signature 99 112 8.8E-8 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 Gene3D G3DSA:3.50.50.60 146 266 4.2E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 Gene3D G3DSA:3.30.390.30 340 460 2.0E-38 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 Gene3D G3DSA:3.50.50.60 6 326 4.2E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 459 7.1E-166 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 337 358 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 146 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 302 309 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 4.0E-65 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PIRSF PIRSF000350 1 454 2.8E-83 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 36 46 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 SUPERFAMILY SSF55424 337 459 9.62E-36 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 322 3.1E-68 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.2E-36 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.2E-36 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 1.2E-36 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 134 152 1.2E-36 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 1.2E-36 T 11-10-2018 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 449 3.5E-31 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 UP17_11940 a5b7e97d77245764c60f6dc0ae61f613 460 SUPERFAMILY SSF51905 4 316 4.58E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_18260 61599fbf0c48833230d8f871baa0372e 365 Gene3D G3DSA:3.90.230.10 139 364 3.2E-83 T 11-10-2018 UP17_18260 61599fbf0c48833230d8f871baa0372e 365 Gene3D G3DSA:3.40.350.10 1 138 5.4E-39 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal UP17_18260 61599fbf0c48833230d8f871baa0372e 365 Pfam PF00557 Metallopeptidase family M24 146 348 1.2E-65 T 11-10-2018 IPR000994 Peptidase M24 UP17_18260 61599fbf0c48833230d8f871baa0372e 365 SUPERFAMILY SSF53092 1 136 4.36E-33 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal UP17_18260 61599fbf0c48833230d8f871baa0372e 365 SUPERFAMILY SSF55920 137 364 2.88E-81 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like UP17_18260 61599fbf0c48833230d8f871baa0372e 365 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 294 306 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site UP17_18260 61599fbf0c48833230d8f871baa0372e 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 316 328 4.9E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_18260 61599fbf0c48833230d8f871baa0372e 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 209 4.9E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_18260 61599fbf0c48833230d8f871baa0372e 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 218 234 4.9E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_18260 61599fbf0c48833230d8f871baa0372e 365 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 138 1.1E-26 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 UP17_24390 e7a1479024021576ccd79ddcc731203e 61 SUPERFAMILY SSF55331 2 60 1.7E-18 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily UP17_24390 e7a1479024021576ccd79ddcc731203e 61 Gene3D G3DSA:3.30.429.10 1 60 3.2E-25 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily UP17_24390 e7a1479024021576ccd79ddcc731203e 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 59 1.5E-24 T 11-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 UP17_24390 e7a1479024021576ccd79ddcc731203e 61 Pfam PF01361 Tautomerase enzyme 2 60 2.3E-21 T 11-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 UP17_22195 2a64e33102197256e28f1d0388f53975 469 Hamap MF_01935 Isochorismate synthase MenF [menF]. 5 465 28.53 T 11-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 UP17_22195 2a64e33102197256e28f1d0388f53975 469 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 113 463 1.2E-105 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 UP17_22195 2a64e33102197256e28f1d0388f53975 469 Gene3D G3DSA:3.60.120.10 6 466 9.6E-109 T 11-10-2018 IPR005801 ADC synthase GO:0009058 UP17_22195 2a64e33102197256e28f1d0388f53975 469 SUPERFAMILY SSF56322 49 464 5.61E-98 T 11-10-2018 IPR005801 ADC synthase GO:0009058 UP17_22195 2a64e33102197256e28f1d0388f53975 469 Pfam PF00425 chorismate binding enzyme 203 455 4.5E-74 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal UP17_22195 2a64e33102197256e28f1d0388f53975 469 PRINTS PR00095 Anthranilate synthase component I signature 412 426 2.1E-5 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_22195 2a64e33102197256e28f1d0388f53975 469 PRINTS PR00095 Anthranilate synthase component I signature 397 411 2.1E-5 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_22195 2a64e33102197256e28f1d0388f53975 469 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.1E-5 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_19375 c4a6d1a2f8dd4ad6f46189b8f141219b 348 Gene3D G3DSA:3.30.565.10 210 342 2.8E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_19375 c4a6d1a2f8dd4ad6f46189b8f141219b 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 339 7.4E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_19375 c4a6d1a2f8dd4ad6f46189b8f141219b 348 SMART SM00387 248 341 5.7E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_19375 c4a6d1a2f8dd4ad6f46189b8f141219b 348 SUPERFAMILY SSF55874 221 339 5.24E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_19375 c4a6d1a2f8dd4ad6f46189b8f141219b 348 PIRSF PIRSF037431 1 347 1.9E-121 T 11-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 UP17_19375 c4a6d1a2f8dd4ad6f46189b8f141219b 348 Pfam PF07730 Histidine kinase 145 212 6.3E-15 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 UP17_06205 627d18253729662cd530dd9454ed6cce 700 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 12 171 1.1E-42 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal UP17_06205 627d18253729662cd530dd9454ed6cce 700 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 482 681 2.9E-49 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal UP17_06205 627d18253729662cd530dd9454ed6cce 700 Pfam PF12698 ABC-2 family transporter protein 19 160 5.6E-9 T 11-10-2018 UP17_06205 627d18253729662cd530dd9454ed6cce 700 Pfam PF12698 ABC-2 family transporter protein 348 677 3.8E-13 T 11-10-2018 UP17_22790 bc350b9ad281c1d223519b751cc668b1 134 Gene3D G3DSA:2.40.50.140 2 88 1.0E-31 T 11-10-2018 UP17_22790 bc350b9ad281c1d223519b751cc668b1 134 SUPERFAMILY SSF50249 5 88 2.01E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_22790 bc350b9ad281c1d223519b751cc668b1 134 SMART SM00316 6 77 2.0E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_22790 bc350b9ad281c1d223519b751cc668b1 134 Pfam PF00575 S1 RNA binding domain 4 77 3.7E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_04995 35f6c0febace3e5410a8fb534992ddba 229 Gene3D G3DSA:1.10.10.10 120 228 1.4E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04995 35f6c0febace3e5410a8fb534992ddba 229 SUPERFAMILY SSF52172 1 180 2.13E-40 T 11-10-2018 IPR011006 CheY-like superfamily UP17_04995 35f6c0febace3e5410a8fb534992ddba 229 Gene3D G3DSA:3.40.50.2300 1 119 9.5E-36 T 11-10-2018 UP17_04995 35f6c0febace3e5410a8fb534992ddba 229 SMART SM00448 2 112 2.7E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_04995 35f6c0febace3e5410a8fb534992ddba 229 SMART SM00862 148 224 1.8E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_04995 35f6c0febace3e5410a8fb534992ddba 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 5.1E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_04995 35f6c0febace3e5410a8fb534992ddba 229 Pfam PF00072 Response regulator receiver domain 4 112 9.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 Gene3D G3DSA:3.40.640.10 47 286 4.8E-134 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 Pfam PF00202 Aminotransferase class-III 13 377 4.8E-117 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 Gene3D G3DSA:3.90.1150.10 15 370 4.8E-134 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 204 241 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 377 6.5E-147 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 380 65.37 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 SUPERFAMILY SSF53383 4 377 8.43E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 PIRSF PIRSF000521 150 380 1.4E-41 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 PIRSF PIRSF000521 10 114 6.8E-6 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_05875 54f26d2a3c8469abdfdab08139d3a1db 383 PIRSF PIRSF000521 106 147 0.017 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 350 4.4E-129 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 SMART SM00729 102 318 0.0087 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 Gene3D G3DSA:3.20.20.70 67 335 7.5E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 Pfam PF04055 Radical SAM superfamily 106 277 1.8E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 SUPERFAMILY SSF102114 97 312 2.88E-15 T 11-10-2018 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 Gene3D G3DSA:1.10.150.530 3 64 1.9E-18 T 11-10-2018 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 PIRSF PIRSF006004 1 355 5.3E-131 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 350 69.601 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 UP17_24865 b290dfe91a4574f83ef47766e37652c0 355 Pfam PF13394 4Fe-4S single cluster domain 111 215 3.8E-8 T 11-10-2018 UP17_17895 18cb00898da89277f8d4f034171a22bf 257 Pfam PF01012 Electron transfer flavoprotein domain 23 206 3.0E-47 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 UP17_17895 18cb00898da89277f8d4f034171a22bf 257 SUPERFAMILY SSF52402 1 244 3.6E-75 T 11-10-2018 UP17_17895 18cb00898da89277f8d4f034171a22bf 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 UP17_17895 18cb00898da89277f8d4f034171a22bf 257 Gene3D G3DSA:3.40.50.620 1 256 4.4E-81 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_17895 18cb00898da89277f8d4f034171a22bf 257 SMART SM00893 21 211 6.1E-56 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 UP17_17895 18cb00898da89277f8d4f034171a22bf 257 PIRSF PIRSF000090 1 257 3.6E-76 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 SUPERFAMILY SSF51905 6 348 1.4E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 Pfam PF01494 FAD binding domain 5 315 3.6E-41 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 Gene3D G3DSA:3.30.9.50 75 271 3.6E-56 T 11-10-2018 UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 Gene3D G3DSA:3.50.50.60 6 318 3.6E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 5.4E-22 T 11-10-2018 UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 5.4E-22 T 11-10-2018 UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.4E-22 T 11-10-2018 UP17_22930 65aa0fd7d7f87243698eadd147b4f116 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 5.4E-22 T 11-10-2018 UP17_16170 8e928132604eba51ed125042da462873 169 Pfam PF11085 Conserved membrane protein YqhR 10 162 4.0E-52 T 11-10-2018 IPR024563 Uncharacterised protein family YqhR UP17_16170 8e928132604eba51ed125042da462873 169 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 1 158 2.0E-33 T 11-10-2018 IPR024563 Uncharacterised protein family YqhR UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 52.99 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 Pfam PF00406 Adenylate kinase 5 190 6.0E-61 T 11-10-2018 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 210 3.8E-80 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 2.9E-17 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 PRINTS PR00094 Adenylate kinase signature 160 175 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 PRINTS PR00094 Adenylate kinase signature 32 46 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 PRINTS PR00094 Adenylate kinase signature 4 17 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 PRINTS PR00094 Adenylate kinase signature 177 191 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 PRINTS PR00094 Adenylate kinase signature 81 97 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 Gene3D G3DSA:3.40.50.300 1 211 6.0E-84 T 11-10-2018 UP17_00795 1c0ea26277d74a713bc718d8c3545049 217 SUPERFAMILY SSF52540 4 212 2.77E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08190 c1a47da9969e7d276ec54e7e246a5a14 311 SUPERFAMILY SSF51556 3 308 4.42E-67 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_08190 c1a47da9969e7d276ec54e7e246a5a14 311 Gene3D G3DSA:3.20.20.140 1 305 4.2E-99 T 11-10-2018 UP17_08190 c1a47da9969e7d276ec54e7e246a5a14 311 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 303 4.8E-89 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 UP17_08370 809a9c856071074505a2edbed0aeafe7 202 Pfam PF03458 UPF0126 domain 92 160 2.7E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 UP17_08370 809a9c856071074505a2edbed0aeafe7 202 Pfam PF03458 UPF0126 domain 5 78 1.8E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 UP17_16815 836bfcba6fe8b9c3b98205b199b61d99 337 Gene3D G3DSA:1.10.8.60 148 215 2.4E-12 T 11-10-2018 UP17_16815 836bfcba6fe8b9c3b98205b199b61d99 337 Gene3D G3DSA:3.40.50.300 1 143 1.5E-41 T 11-10-2018 UP17_16815 836bfcba6fe8b9c3b98205b199b61d99 337 Pfam PF06144 DNA polymerase III, delta subunit 18 193 5.2E-50 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 UP17_16815 836bfcba6fe8b9c3b98205b199b61d99 337 SUPERFAMILY SSF52540 7 213 4.06E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16815 836bfcba6fe8b9c3b98205b199b61d99 337 SUPERFAMILY SSF48019 217 336 1.5E-25 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 UP17_16815 836bfcba6fe8b9c3b98205b199b61d99 337 Gene3D G3DSA:1.20.272.10 216 337 1.6E-40 T 11-10-2018 UP17_16815 836bfcba6fe8b9c3b98205b199b61d99 337 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 336 9.1E-88 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 UP17_21505 204b0135aab969c4bf67667e7cd4b32a 241 Pfam PF00005 ABC transporter 21 161 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_21505 204b0135aab969c4bf67667e7cd4b32a 241 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_21505 204b0135aab969c4bf67667e7cd4b32a 241 Gene3D G3DSA:3.40.50.300 1 238 2.2E-64 T 11-10-2018 UP17_21505 204b0135aab969c4bf67667e7cd4b32a 241 SUPERFAMILY SSF52540 4 224 4.44E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_21505 204b0135aab969c4bf67667e7cd4b32a 241 SMART SM00382 29 209 1.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_00235 6251f57459785a07b0dd1874de9a8636 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 UP17_00235 6251f57459785a07b0dd1874de9a8636 255 Gene3D G3DSA:3.20.20.140 1 255 4.1E-112 T 11-10-2018 UP17_00235 6251f57459785a07b0dd1874de9a8636 255 PIRSF PIRSF005902 1 255 1.6E-91 T 11-10-2018 IPR001130 TatD family GO:0016788 UP17_00235 6251f57459785a07b0dd1874de9a8636 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 UP17_00235 6251f57459785a07b0dd1874de9a8636 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 8.7E-101 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 UP17_00235 6251f57459785a07b0dd1874de9a8636 255 SUPERFAMILY SSF51556 1 254 1.87E-98 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_00235 6251f57459785a07b0dd1874de9a8636 255 Pfam PF01026 TatD related DNase 3 252 3.9E-91 T 11-10-2018 IPR001130 TatD family GO:0016788 UP17_09155 124e63d03f834daf220041474f08e18c 153 SUPERFAMILY SSF54593 1 135 2.11E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_09155 124e63d03f834daf220041474f08e18c 153 Gene3D G3DSA:3.10.180.10 5 148 1.2E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_09155 124e63d03f834daf220041474f08e18c 153 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 127 4.8E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_06225 f67dad1fbe52dadec43e966dc2b2b5f3 312 SUPERFAMILY SSF64182 15 307 3.79E-67 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily UP17_06225 f67dad1fbe52dadec43e966dc2b2b5f3 312 Gene3D G3DSA:3.90.1640.10 2 199 2.4E-58 T 11-10-2018 UP17_06225 f67dad1fbe52dadec43e966dc2b2b5f3 312 Pfam PF01368 DHH family 18 155 3.9E-12 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_06225 f67dad1fbe52dadec43e966dc2b2b5f3 312 Pfam PF02272 DHHA1 domain 178 310 4.7E-13 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 UP17_06225 f67dad1fbe52dadec43e966dc2b2b5f3 312 Gene3D G3DSA:3.10.310.30 202 311 4.9E-32 T 11-10-2018 UP17_14780 1b4114fabbc2ccd93dcce4fee36d9cc5 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 1.6E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 UP17_14780 1b4114fabbc2ccd93dcce4fee36d9cc5 101 SUPERFAMILY SSF52794 1 100 7.32E-25 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_14780 1b4114fabbc2ccd93dcce4fee36d9cc5 101 Gene3D G3DSA:3.40.50.2300 1 101 1.1E-25 T 11-10-2018 UP17_11765 0a2f153cfabb2198bb794cea4f89c871 154 SUPERFAMILY SSF109854 5 152 8.24E-26 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_11765 0a2f153cfabb2198bb794cea4f89c871 154 Pfam PF05163 DinB family 7 151 2.4E-15 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB UP17_11765 0a2f153cfabb2198bb794cea4f89c871 154 Gene3D G3DSA:1.20.120.450 1 152 8.8E-29 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_16220 44a9c065e8c0c586f264abbf9bb0ae89 448 PIRSF PIRSF006815 3 447 7.3E-191 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 UP17_16220 44a9c065e8c0c586f264abbf9bb0ae89 448 SUPERFAMILY SSF53383 3 443 3.07E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_16220 44a9c065e8c0c586f264abbf9bb0ae89 448 Pfam PF02347 Glycine cleavage system P-protein 3 442 1.3E-160 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 UP17_16220 44a9c065e8c0c586f264abbf9bb0ae89 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 50.047 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 UP17_16220 44a9c065e8c0c586f264abbf9bb0ae89 448 Gene3D G3DSA:3.40.640.10 84 349 8.5E-165 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_16220 44a9c065e8c0c586f264abbf9bb0ae89 448 Gene3D G3DSA:3.90.1150.10 73 443 8.5E-165 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_19415 8a1b37c3b4805da0356ef2d2df1c1f30 208 SUPERFAMILY SSF102198 2 204 3.14E-57 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 UP17_19415 8a1b37c3b4805da0356ef2d2df1c1f30 208 Hamap MF_01969 Kynurenine formamidase [kynB]. 3 207 41.936 T 11-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 UP17_19415 8a1b37c3b4805da0356ef2d2df1c1f30 208 Pfam PF04199 Putative cyclase 5 150 6.1E-19 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 UP17_19415 8a1b37c3b4805da0356ef2d2df1c1f30 208 Gene3D G3DSA:3.50.30.50 1 207 6.3E-73 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 UP17_19415 8a1b37c3b4805da0356ef2d2df1c1f30 208 TIGRFAM TIGR03035 trp_arylform: arylformamidase 3 207 9.4E-85 T 11-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 UP17_19255 02cc05bd5e6355ffd1dc89a75af4e39c 172 Gene3D G3DSA:1.20.5.190 103 149 3.2E-9 T 11-10-2018 UP17_19255 02cc05bd5e6355ffd1dc89a75af4e39c 172 Gene3D G3DSA:1.20.5.190 6 50 1.4E-5 T 11-10-2018 UP17_19255 02cc05bd5e6355ffd1dc89a75af4e39c 172 Gene3D G3DSA:1.20.5.190 51 100 1.0E-12 T 11-10-2018 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 Pfam PF01817 Chorismate mutase type II 10 87 1.2E-17 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 SUPERFAMILY SSF51569 31 354 7.33E-102 T 11-10-2018 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 Pfam PF00793 DAHP synthetase I family 111 352 6.0E-82 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 101 4.9E-38 T 11-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 Gene3D G3DSA:1.20.59.10 8 92 2.0E-25 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 SMART SM00830 10 89 2.6E-20 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 Gene3D G3DSA:3.20.20.70 93 357 9.6E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_18465 8cc76a3cda39cc95a621b11b95dae218 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 1.3E-119 T 11-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 UP17_09910 6a731018c2423ef8623c06a25426b1ca 251 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 16 234 7.9E-78 T 11-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 UP17_09910 6a731018c2423ef8623c06a25426b1ca 251 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 13 226 1.9E-72 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D UP17_09910 6a731018c2423ef8623c06a25426b1ca 251 SMART SM00796 11 226 8.5E-91 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D UP17_09910 6a731018c2423ef8623c06a25426b1ca 251 Gene3D G3DSA:3.30.1360.40 8 109 1.9E-26 T 11-10-2018 UP17_09910 6a731018c2423ef8623c06a25426b1ca 251 Gene3D G3DSA:2.40.100.10 111 249 3.4E-58 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_09910 6a731018c2423ef8623c06a25426b1ca 251 SUPERFAMILY SSF160467 14 117 4.45E-16 T 11-10-2018 UP17_09910 6a731018c2423ef8623c06a25426b1ca 251 SUPERFAMILY SSF50891 113 242 1.59E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_18290 8dc74364501fa8e85536e6998718f1d5 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 UP17_18290 8dc74364501fa8e85536e6998718f1d5 170 SUPERFAMILY SSF53218 12 167 5.89E-44 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily UP17_18290 8dc74364501fa8e85536e6998718f1d5 170 PIRSF PIRSF006443 1 170 4.8E-67 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UP17_18290 8dc74364501fa8e85536e6998718f1d5 170 Gene3D G3DSA:3.40.980.10 1 169 9.9E-52 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily UP17_18290 8dc74364501fa8e85536e6998718f1d5 170 Pfam PF00994 Probable molybdopterin binding domain 18 161 2.1E-36 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_18290 8dc74364501fa8e85536e6998718f1d5 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 14 157 6.7E-39 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_18290 8dc74364501fa8e85536e6998718f1d5 170 SMART SM00852 17 162 1.4E-30 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_15135 4765caf603bcaf9bd9cc511d214a83b9 122 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 10 117 2.9E-32 T 11-10-2018 IPR014913 Protein of unknown function DUF1798 UP17_15135 4765caf603bcaf9bd9cc511d214a83b9 122 Gene3D G3DSA:1.20.120.440 2 121 9.1E-41 T 11-10-2018 IPR023351 YppE-like superfamily UP17_15135 4765caf603bcaf9bd9cc511d214a83b9 122 SUPERFAMILY SSF140415 5 119 1.31E-33 T 11-10-2018 IPR023351 YppE-like superfamily UP17_01565 37da32901fb4e8903914adff8b1490da 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 42.467 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_01565 37da32901fb4e8903914adff8b1490da 545 Gene3D G3DSA:1.10.560.10 7 518 2.6E-234 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily UP17_01565 37da32901fb4e8903914adff8b1490da 545 SUPERFAMILY SSF54849 136 204 6.41E-27 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily UP17_01565 37da32901fb4e8903914adff8b1490da 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_01565 37da32901fb4e8903914adff8b1490da 545 SUPERFAMILY SSF48592 5 518 1.33E-79 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily UP17_01565 37da32901fb4e8903914adff8b1490da 545 Gene3D G3DSA:3.30.260.10 135 408 2.6E-234 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily UP17_01565 37da32901fb4e8903914adff8b1490da 545 Gene3D G3DSA:3.50.7.10 190 370 2.6E-234 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily UP17_01565 37da32901fb4e8903914adff8b1490da 545 PRINTS PR00298 60kDa chaperonin signature 82 109 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_01565 37da32901fb4e8903914adff8b1490da 545 PRINTS PR00298 60kDa chaperonin signature 396 417 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_01565 37da32901fb4e8903914adff8b1490da 545 PRINTS PR00298 60kDa chaperonin signature 26 52 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_01565 37da32901fb4e8903914adff8b1490da 545 PRINTS PR00298 60kDa chaperonin signature 348 373 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_01565 37da32901fb4e8903914adff8b1490da 545 PRINTS PR00298 60kDa chaperonin signature 266 289 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_01565 37da32901fb4e8903914adff8b1490da 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 2.2E-101 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 UP17_01565 37da32901fb4e8903914adff8b1490da 545 SUPERFAMILY SSF52029 183 374 3.44E-84 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily UP17_01565 37da32901fb4e8903914adff8b1490da 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 1.8E-257 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 UP17_22985 0e0d5982ce37baca7b9ddc11fcd2dee0 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 2.7E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_22985 0e0d5982ce37baca7b9ddc11fcd2dee0 405 Gene3D G3DSA:3.50.50.100 1 405 4.2E-139 T 11-10-2018 UP17_22985 0e0d5982ce37baca7b9ddc11fcd2dee0 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.4E-5 T 11-10-2018 UP17_22985 0e0d5982ce37baca7b9ddc11fcd2dee0 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.4E-5 T 11-10-2018 UP17_22985 0e0d5982ce37baca7b9ddc11fcd2dee0 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 3.4E-5 T 11-10-2018 UP17_22985 0e0d5982ce37baca7b9ddc11fcd2dee0 405 SUPERFAMILY SSF51905 6 341 1.34E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_18000 67d427731a1e5106524ca241c9695354 563 Pfam PF02652 L-lactate permease 16 554 6.9E-201 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 UP17_18000 67d427731a1e5106524ca241c9695354 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 15 554 5.7E-184 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 181 203 1.7E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 223 243 1.7E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 349 360 1.7E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 101 115 1.7E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 109 122 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 45 172 2.0E-54 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 190 421 1.8E-75 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 Gene3D G3DSA:3.40.50.10860 46 189 6.5E-63 T 11-10-2018 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 Gene3D G3DSA:3.40.50.720 190 423 1.2E-83 T 11-10-2018 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 PIRSF PIRSF000185 7 423 6.6E-167 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 SUPERFAMILY SSF51735 190 422 3.05E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 SMART SM00839 192 421 1.7E-90 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 UP17_19105 c40ec0f430ae4416ab046316b7cee178 423 SUPERFAMILY SSF53223 14 192 1.57E-66 T 11-10-2018 UP17_06485 11e3a50f6d1bdd7c24515913131eacb9 179 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 90 161 8.0E-18 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 UP17_06485 11e3a50f6d1bdd7c24515913131eacb9 179 Gene3D G3DSA:3.30.1380.10 30 161 3.3E-38 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 UP17_06485 11e3a50f6d1bdd7c24515913131eacb9 179 SUPERFAMILY SSF55166 39 161 1.31E-26 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 UP17_23515 7cb76a44caf61e503ec81c502fa19413 328 Pfam PF01933 Uncharacterised protein family UPF0052 10 294 1.8E-110 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 UP17_23515 7cb76a44caf61e503ec81c502fa19413 328 Hamap MF_00973 Gluconeogenesis factor. 6 320 36.146 T 11-10-2018 IPR010119 Gluconeogenesis factor UP17_23515 7cb76a44caf61e503ec81c502fa19413 328 Gene3D G3DSA:3.40.50.12300 4 325 1.6E-133 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily UP17_23515 7cb76a44caf61e503ec81c502fa19413 328 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 10 318 1.5E-130 T 11-10-2018 IPR010119 Gluconeogenesis factor UP17_23515 7cb76a44caf61e503ec81c502fa19413 328 SUPERFAMILY SSF142338 7 315 4.71E-108 T 11-10-2018 UP17_22030 0ff94ea8cab1336b33a329b7cc547f22 172 SUPERFAMILY SSF51161 3 167 2.63E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_22030 0ff94ea8cab1336b33a329b7cc547f22 172 Gene3D G3DSA:2.160.10.10 1 172 8.6E-74 T 11-10-2018 UP17_22030 0ff94ea8cab1336b33a329b7cc547f22 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 9.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_22030 0ff94ea8cab1336b33a329b7cc547f22 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 6.7E-6 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_13970 416488b25509c7c2e16828868a5eeb69 630 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain UP17_13970 416488b25509c7c2e16828868a5eeb69 630 Pfam PF02378 Phosphotransferase system, EIIC 302 563 7.1E-11 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 291 626 1.4E-132 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 177 256 4.6E-30 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 SUPERFAMILY SSF55804 1 148 1.7E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 177 266 9.2E-19 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 Gene3D G3DSA:3.40.50.2300 163 276 1.8E-42 T 11-10-2018 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 3.8E-38 T 11-10-2018 IPR002178 PTS EIIA type-2 domain UP17_13970 416488b25509c7c2e16828868a5eeb69 630 Gene3D G3DSA:3.40.930.10 1 151 2.7E-46 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 9.5E-39 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 UP17_13970 416488b25509c7c2e16828868a5eeb69 630 SUPERFAMILY SSF52794 174 276 2.96E-37 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_01205 7b96c3fd002fdd58ae183afd23643a2e 157 Pfam PF01047 MarR family 48 97 5.6E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_01205 7b96c3fd002fdd58ae183afd23643a2e 157 Gene3D G3DSA:1.10.10.10 4 154 9.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01205 7b96c3fd002fdd58ae183afd23643a2e 157 SMART SM00347 32 132 1.7E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_01205 7b96c3fd002fdd58ae183afd23643a2e 157 SUPERFAMILY SSF46785 14 152 9.22E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 Pfam PF02222 ATP-grasp domain 116 286 3.4E-55 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 SUPERFAMILY SSF56059 105 307 1.77E-56 T 11-10-2018 UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 6 383 7.1E-183 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 SUPERFAMILY SSF52440 4 104 3.6E-30 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 SUPERFAMILY SSF51246 311 383 8.0E-12 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 Gene3D G3DSA:3.40.50.20 1 115 2.0E-48 T 11-10-2018 UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 Gene3D G3DSA:3.30.1490.20 116 188 2.9E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 Gene3D G3DSA:3.30.470.20 189 385 2.5E-55 T 11-10-2018 UP17_22610 7c7af2b016ba885286c2fbe0e470aaf2 385 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 1 384 51.007 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UP17_20610 515fb6eea4cc2ae65d866a9eec962e4c 418 SUPERFAMILY SSF51556 72 377 1.13E-67 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_20610 515fb6eea4cc2ae65d866a9eec962e4c 418 Pfam PF07969 Amidohydrolase family 149 406 3.7E-16 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_20610 515fb6eea4cc2ae65d866a9eec962e4c 418 Gene3D G3DSA:3.20.20.140 72 366 8.8E-102 T 11-10-2018 UP17_20610 515fb6eea4cc2ae65d866a9eec962e4c 418 Gene3D G3DSA:2.30.40.10 34 406 8.8E-102 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 SUPERFAMILY SSF56801 4 540 2.88E-153 T 11-10-2018 UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 Gene3D G3DSA:3.30.300.30 436 538 1.0E-31 T 11-10-2018 UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 526 1.4E-16 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 Gene3D G3DSA:3.40.50.980 31 351 1.8E-119 T 11-10-2018 UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 Pfam PF00501 AMP-binding enzyme 10 442 3.0E-108 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 Gene3D G3DSA:3.40.50.980 34 208 1.8E-119 T 11-10-2018 UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_11095 d39bab2efe739cd90cfee2bb13029393 545 Gene3D G3DSA:2.30.38.10 352 435 1.8E-119 T 11-10-2018 UP17_23525 3240fe03ed4ac384ca4c55d2f7eee7be 152 Gene3D G3DSA:3.90.79.10 1 152 1.0E-41 T 11-10-2018 UP17_23525 3240fe03ed4ac384ca4c55d2f7eee7be 152 Pfam PF00293 NUDIX domain 4 123 1.6E-19 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_23525 3240fe03ed4ac384ca4c55d2f7eee7be 152 SUPERFAMILY SSF55811 4 129 2.71E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_23525 3240fe03ed4ac384ca4c55d2f7eee7be 152 PRINTS PR00502 NUDIX hydrolase family signature 26 40 4.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_23525 3240fe03ed4ac384ca4c55d2f7eee7be 152 PRINTS PR00502 NUDIX hydrolase family signature 40 55 4.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_03875 31edd67c6925b6d27aa3742a5881726b 335 Gene3D G3DSA:3.40.50.300 4 273 8.6E-61 T 11-10-2018 UP17_03875 31edd67c6925b6d27aa3742a5881726b 335 Pfam PF00005 ABC transporter 42 185 2.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03875 31edd67c6925b6d27aa3742a5881726b 335 SUPERFAMILY SSF52540 34 251 3.52E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03875 31edd67c6925b6d27aa3742a5881726b 335 SMART SM00382 50 234 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_07085 8914631bff1ffb0fbaf950ad51311aee 198 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 24 153 3.2E-15 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like UP17_07085 8914631bff1ffb0fbaf950ad51311aee 198 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 4 155 2.8E-39 T 11-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 UP17_02105 c76f048262788b5f21bbfbadade6e858 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 111 1.2E-39 T 11-10-2018 IPR005562 SpoVA UP17_02105 c76f048262788b5f21bbfbadade6e858 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 5.5E-51 T 11-10-2018 IPR014204 Sporulation stage V, protein AE UP17_15490 ce87dc9cbe6acf423e3a60ac27091b51 348 Pfam PF01070 FMN-dependent dehydrogenase 166 325 3.9E-15 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 UP17_15490 ce87dc9cbe6acf423e3a60ac27091b51 348 SUPERFAMILY SSF51395 23 344 4.13E-82 T 11-10-2018 UP17_15490 ce87dc9cbe6acf423e3a60ac27091b51 348 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 1.9E-116 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 UP17_15490 ce87dc9cbe6acf423e3a60ac27091b51 348 PIRSF PIRSF003314 1 340 4.6E-120 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 UP17_15490 ce87dc9cbe6acf423e3a60ac27091b51 348 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 37.902 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 UP17_15490 ce87dc9cbe6acf423e3a60ac27091b51 348 Gene3D G3DSA:3.20.20.70 2 348 3.6E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_01950 c098ea700b8d954bda25a4a376dbe4a3 162 Pfam PF00731 AIR carboxylase 4 152 2.1E-65 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 UP17_01950 c098ea700b8d954bda25a4a376dbe4a3 162 SMART SM01001 3 154 2.6E-104 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 UP17_01950 c098ea700b8d954bda25a4a376dbe4a3 162 Gene3D G3DSA:3.40.50.7700 1 162 1.7E-73 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 UP17_01950 c098ea700b8d954bda25a4a376dbe4a3 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 161 6.4E-68 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 UP17_01950 c098ea700b8d954bda25a4a376dbe4a3 162 SUPERFAMILY SSF52255 4 161 7.59E-69 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 UP17_01950 c098ea700b8d954bda25a4a376dbe4a3 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 33.427 T 11-10-2018 IPR033747 Class I PurE UP17_01950 c098ea700b8d954bda25a4a376dbe4a3 162 PIRSF PIRSF001338 1 162 6.0E-71 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 UP17_22455 831724ce456d5625db6fb43f8bf505d2 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 15 363 2.2E-15 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 UP17_22455 831724ce456d5625db6fb43f8bf505d2 367 SUPERFAMILY SSF51726 12 367 1.96E-81 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_22455 831724ce456d5625db6fb43f8bf505d2 367 Gene3D G3DSA:3.20.20.210 5 367 7.8E-122 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 UP17_14625 558f438d7b04299a02cac35ec2dfa210 454 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 36 424 1.1E-119 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 UP17_14625 558f438d7b04299a02cac35ec2dfa210 454 Pfam PF02386 Cation transport protein 37 441 1.0E-67 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 UP17_17470 7125f6ced457e78b2d2e1c7147c6b1e3 368 Gene3D G3DSA:3.40.50.10800 31 348 6.7E-81 T 11-10-2018 UP17_17470 7125f6ced457e78b2d2e1c7147c6b1e3 368 Hamap MF_00569 Quinolinate synthase A [nadA]. 22 367 55.275 T 11-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 UP17_17470 7125f6ced457e78b2d2e1c7147c6b1e3 368 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 21 366 2.2E-114 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 UP17_17470 7125f6ced457e78b2d2e1c7147c6b1e3 368 Pfam PF02445 Quinolinate synthetase A protein 29 366 1.2E-105 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 UP17_17470 7125f6ced457e78b2d2e1c7147c6b1e3 368 Gene3D G3DSA:3.40.50.10800 230 317 6.7E-81 T 11-10-2018 UP17_17470 7125f6ced457e78b2d2e1c7147c6b1e3 368 SUPERFAMILY SSF142754 35 366 5.62E-96 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 UP17_17470 7125f6ced457e78b2d2e1c7147c6b1e3 368 Gene3D G3DSA:3.40.50.10800 112 366 6.7E-81 T 11-10-2018 UP17_20175 27724e080af783b73a6b9430dd5c4cd6 89 SMART SM00894 33 88 2.9E-4 T 11-10-2018 IPR008613 Excalibur calcium-binding domain UP17_20175 27724e080af783b73a6b9430dd5c4cd6 89 Pfam PF05901 Excalibur calcium-binding domain 34 88 2.5E-13 T 11-10-2018 IPR008613 Excalibur calcium-binding domain UP17_04975 b42c7c41f41f3d22dfb07d054dc06c78 208 Pfam PF09335 SNARE associated Golgi protein 29 155 7.8E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 SMART SM00316 148 210 4.4 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 SMART SM00316 3 60 6.1 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 SMART SM00316 65 131 8.3 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 PIRSF PIRSF012524 2 281 5.9E-110 T 11-10-2018 IPR014464 Conserved virulence factor B UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 Gene3D G3DSA:1.10.10.10 218 278 1.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 Pfam PF13509 S1 domain 4 60 3.5E-19 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 Gene3D G3DSA:2.40.50.140 150 216 8.3E-17 T 11-10-2018 UP17_13615 65df7dc91e9bcb3257c875dcd5be68bc 283 Gene3D G3DSA:2.40.50.140 69 145 1.6E-31 T 11-10-2018 UP17_09815 f21c4416053baeaac13a57ff364e5608 325 SUPERFAMILY SSF54593 2 304 7.87E-49 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_09815 f21c4416053baeaac13a57ff364e5608 325 Gene3D G3DSA:3.10.180.10 66 217 7.0E-109 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_09815 f21c4416053baeaac13a57ff364e5608 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 126 4.4E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_09815 f21c4416053baeaac13a57ff364e5608 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 159 265 8.2E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_09815 f21c4416053baeaac13a57ff364e5608 325 Gene3D G3DSA:3.10.180.10 5 309 7.0E-109 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_02595 13d2ad73be39cd40d143b3f4b19a2bd2 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_02595 13d2ad73be39cd40d143b3f4b19a2bd2 486 Pfam PF00171 Aldehyde dehydrogenase family 7 471 1.2E-189 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_02595 13d2ad73be39cd40d143b3f4b19a2bd2 486 SUPERFAMILY SSF53720 1 472 2.49E-180 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_02595 13d2ad73be39cd40d143b3f4b19a2bd2 486 Gene3D G3DSA:3.40.309.10 248 441 4.3E-195 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_02595 13d2ad73be39cd40d143b3f4b19a2bd2 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_02595 13d2ad73be39cd40d143b3f4b19a2bd2 486 Gene3D G3DSA:3.40.605.10 6 466 4.3E-195 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 273 35.9 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 SUPERFAMILY SSF51735 102 275 1.55E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 Gene3D G3DSA:3.40.50.720 101 241 6.6E-98 T 11-10-2018 UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 111 194 1.4E-14 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 SUPERFAMILY SSF53223 2 101 3.34E-34 T 11-10-2018 UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 275 3.8E-94 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 Gene3D G3DSA:3.40.50.10860 5 262 6.6E-98 T 11-10-2018 UP17_16870 c054cac92f2552d3b3f7e083996a05b7 280 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 5.5E-31 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 Gene3D G3DSA:3.40.190.290 90 295 1.6E-36 T 11-10-2018 UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 6.2E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 6.2E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 6.2E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 Gene3D G3DSA:1.10.10.10 2 89 3.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 SUPERFAMILY SSF46785 4 86 3.49E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 Pfam PF03466 LysR substrate binding domain 86 290 3.4E-39 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.4E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10135 ccc7f1a700d783c584b9973023f9aaf2 298 SUPERFAMILY SSF53850 87 295 6.79E-37 T 11-10-2018 UP17_23560 e90405b7701ddefc309857b9d0878384 195 Gene3D G3DSA:3.30.230.40 1 90 2.0E-34 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 UP17_23560 e90405b7701ddefc309857b9d0878384 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 UP17_23560 e90405b7701ddefc309857b9d0878384 195 SUPERFAMILY SSF54211 88 180 2.4E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_23560 e90405b7701ddefc309857b9d0878384 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 UP17_23560 e90405b7701ddefc309857b9d0878384 195 Gene3D G3DSA:3.30.230.40 91 195 4.1E-41 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 UP17_23560 e90405b7701ddefc309857b9d0878384 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 9.5E-64 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 UP17_23560 e90405b7701ddefc309857b9d0878384 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 42.162 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 UP17_23560 e90405b7701ddefc309857b9d0878384 195 SUPERFAMILY SSF54211 3 87 3.67E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_18385 d74823604b7939ca403dab6cfce5abd2 527 Pfam PF00501 AMP-binding enzyme 20 423 2.3E-84 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_18385 d74823604b7939ca403dab6cfce5abd2 527 Gene3D G3DSA:3.40.50.12780 6 419 3.7E-113 T 11-10-2018 UP17_18385 d74823604b7939ca403dab6cfce5abd2 527 Gene3D G3DSA:3.30.300.310 420 525 7.9E-29 T 11-10-2018 UP17_18385 d74823604b7939ca403dab6cfce5abd2 527 SUPERFAMILY SSF56801 19 524 2.22E-143 T 11-10-2018 UP17_18385 d74823604b7939ca403dab6cfce5abd2 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 511 6.3E-24 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_18385 d74823604b7939ca403dab6cfce5abd2 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_22585 4e0cbf1489e41602b48519dc0da250c8 124 PIRSF PIRSF026568 1 124 7.3E-62 T 11-10-2018 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein UP17_22585 4e0cbf1489e41602b48519dc0da250c8 124 SUPERFAMILY SSF82771 43 120 1.7E-13 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_22585 4e0cbf1489e41602b48519dc0da250c8 124 Pfam PF01541 GIY-YIG catalytic domain 44 117 1.0E-8 T 11-10-2018 IPR000305 GIY-YIG endonuclease UP17_22585 4e0cbf1489e41602b48519dc0da250c8 124 SMART SM00465 43 122 7.2E-13 T 11-10-2018 IPR000305 GIY-YIG endonuclease UP17_22585 4e0cbf1489e41602b48519dc0da250c8 124 Gene3D G3DSA:3.40.1440.10 36 122 4.8E-15 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_15725 9a0733f939f8f565a449bfecef74b1f6 140 Pfam PF13782 Stage V sporulation protein AB 27 135 1.3E-35 T 11-10-2018 IPR020144 Stage V sporulation protein AB UP17_15725 9a0733f939f8f565a449bfecef74b1f6 140 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 29 137 6.0E-33 T 11-10-2018 IPR020144 Stage V sporulation protein AB UP17_24875 cce3a91c744f351072a339844c74eeab 403 Gene3D G3DSA:2.30.42.10 303 402 5.1E-23 T 11-10-2018 UP17_24875 cce3a91c744f351072a339844c74eeab 403 Gene3D G3DSA:2.40.10.10 61 180 3.8E-27 T 11-10-2018 UP17_24875 cce3a91c744f351072a339844c74eeab 403 SUPERFAMILY SSF50156 299 398 8.94E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_24875 cce3a91c744f351072a339844c74eeab 403 Pfam PF13180 PDZ domain 300 398 2.1E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_24875 cce3a91c744f351072a339844c74eeab 403 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 8.1E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_24875 cce3a91c744f351072a339844c74eeab 403 PRINTS PR00834 HtrA/DegQ protease family signature 255 272 8.1E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_24875 cce3a91c744f351072a339844c74eeab 403 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 8.1E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_24875 cce3a91c744f351072a339844c74eeab 403 PRINTS PR00834 HtrA/DegQ protease family signature 346 358 8.1E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_24875 cce3a91c744f351072a339844c74eeab 403 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 8.1E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_24875 cce3a91c744f351072a339844c74eeab 403 PRINTS PR00834 HtrA/DegQ protease family signature 233 250 8.1E-37 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 UP17_24875 cce3a91c744f351072a339844c74eeab 403 Pfam PF13365 Trypsin-like peptidase domain 115 262 1.3E-31 T 11-10-2018 UP17_24875 cce3a91c744f351072a339844c74eeab 403 SUPERFAMILY SSF50494 74 296 1.12E-57 T 11-10-2018 IPR009003 Peptidase S1, PA clan UP17_24875 cce3a91c744f351072a339844c74eeab 403 SMART SM00228 300 389 3.1E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_24875 cce3a91c744f351072a339844c74eeab 403 Gene3D G3DSA:2.40.10.10 181 302 1.6E-38 T 11-10-2018 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 Gene3D G3DSA:2.40.180.10 13 514 2.8E-215 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 PRINTS PR00067 Catalase signature 30 53 4.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 PRINTS PR00067 Catalase signature 119 136 4.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 PRINTS PR00067 Catalase signature 335 361 4.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 PRINTS PR00067 Catalase signature 98 116 4.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 PRINTS PR00067 Catalase signature 303 330 4.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 PRINTS PR00067 Catalase signature 138 156 4.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 PIRSF PIRSF038928 4 499 8.0E-176 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 Pfam PF00199 Catalase 17 405 1.8E-171 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 SUPERFAMILY SSF56634 9 494 9.03E-193 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 348 356 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 ProSitePatterns PS00438 Catalase proximal active site signature. 53 69 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 Pfam PF06628 Catalase-related immune-responsive 432 493 1.7E-13 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_23635 0d832b00fb55c44f1c644aec37be038c 525 SMART SM01060 17 409 1.7E-249 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 UP17_11745 26c9b28b801eb1ba768feb9cefae8086 265 SUPERFAMILY SSF158430 125 258 1.44E-41 T 11-10-2018 UP17_11745 26c9b28b801eb1ba768feb9cefae8086 265 Gene3D G3DSA:1.20.1260.120 1 264 4.0E-94 T 11-10-2018 UP17_11745 26c9b28b801eb1ba768feb9cefae8086 265 SUPERFAMILY SSF158430 8 123 1.11E-32 T 11-10-2018 UP17_11745 26c9b28b801eb1ba768feb9cefae8086 265 Pfam PF11155 Domain of unknown function (DUF2935) 127 245 6.3E-29 T 11-10-2018 IPR021328 Protein of unknown function DUF2935 UP17_11745 26c9b28b801eb1ba768feb9cefae8086 265 Pfam PF11155 Domain of unknown function (DUF2935) 11 115 5.4E-23 T 11-10-2018 IPR021328 Protein of unknown function DUF2935 UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 Gene3D G3DSA:1.10.260.40 1 60 1.3E-21 T 11-10-2018 UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 Gene3D G3DSA:3.40.50.2300 77 328 2.7E-71 T 11-10-2018 UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 SMART SM00354 2 72 4.6E-24 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 Gene3D G3DSA:3.40.50.2300 166 334 2.7E-71 T 11-10-2018 UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 9.0E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 SUPERFAMILY SSF53822 74 335 2.78E-63 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 Pfam PF13377 Periplasmic binding protein-like domain 178 335 9.8E-33 T 11-10-2018 UP17_02305 ff955b467b430c77d178ee4cc25c13b1 344 SUPERFAMILY SSF47413 2 60 6.65E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_09450 0768517b6e73335a862b24009f2b815c 214 Pfam PF07729 FCD domain 80 202 1.7E-14 T 11-10-2018 IPR011711 GntR, C-terminal UP17_09450 0768517b6e73335a862b24009f2b815c 214 Gene3D G3DSA:1.20.120.530 76 209 5.4E-16 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_09450 0768517b6e73335a862b24009f2b815c 214 SUPERFAMILY SSF46785 6 95 5.72E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09450 0768517b6e73335a862b24009f2b815c 214 Gene3D G3DSA:1.10.10.10 4 72 5.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09450 0768517b6e73335a862b24009f2b815c 214 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 2.8E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09450 0768517b6e73335a862b24009f2b815c 214 SUPERFAMILY SSF48008 78 202 5.49E-12 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_09450 0768517b6e73335a862b24009f2b815c 214 SMART SM00345 12 70 1.8E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_02270 55331906389acb9c30283973e1bb14b3 247 Pfam PF12146 Serine aminopeptidase, S33 57 226 1.9E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 UP17_02270 55331906389acb9c30283973e1bb14b3 247 Gene3D G3DSA:3.40.50.1820 2 245 7.8E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_02270 55331906389acb9c30283973e1bb14b3 247 SUPERFAMILY SSF53474 3 242 3.27E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_18005 39652bb7e3293613b1741aa97251862c 243 SUPERFAMILY SSF46785 4 84 9.26E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_18005 39652bb7e3293613b1741aa97251862c 243 Pfam PF07729 FCD domain 100 225 1.8E-20 T 11-10-2018 IPR011711 GntR, C-terminal UP17_18005 39652bb7e3293613b1741aa97251862c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.3E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18005 39652bb7e3293613b1741aa97251862c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.3E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18005 39652bb7e3293613b1741aa97251862c 243 SMART SM00345 15 74 5.2E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18005 39652bb7e3293613b1741aa97251862c 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 4.7E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_18005 39652bb7e3293613b1741aa97251862c 243 Gene3D G3DSA:1.20.120.530 94 243 7.3E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_18005 39652bb7e3293613b1741aa97251862c 243 Gene3D G3DSA:1.10.10.10 1 74 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18005 39652bb7e3293613b1741aa97251862c 243 SUPERFAMILY SSF48008 95 232 7.32E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_18005 39652bb7e3293613b1741aa97251862c 243 SMART SM00895 99 226 3.5E-19 T 11-10-2018 IPR011711 GntR, C-terminal UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 SUPERFAMILY SSF56784 10 263 1.5E-59 T 11-10-2018 IPR036412 HAD-like superfamily UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 Gene3D G3DSA:1.10.150.240 28 105 6.6E-107 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 276 104.806 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 105 202 2.6E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 208 1.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 10 261 2.4E-103 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 208 6.2E-13 T 11-10-2018 UP17_09735 527d8ead5323fa0c1462b9e39da7baeb 276 Gene3D G3DSA:3.40.50.1000 10 260 6.6E-107 T 11-10-2018 IPR023214 HAD superfamily UP17_22840 1cf49a8bb9e170e4ed01b17ba2ae009a 204 Gene3D G3DSA:1.10.287.210 116 204 1.1E-30 T 11-10-2018 UP17_22840 1cf49a8bb9e170e4ed01b17ba2ae009a 204 SUPERFAMILY SSF50729 14 203 5.53E-65 T 11-10-2018 UP17_22840 1cf49a8bb9e170e4ed01b17ba2ae009a 204 Gene3D G3DSA:2.30.29.50 12 115 5.9E-45 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily UP17_22840 1cf49a8bb9e170e4ed01b17ba2ae009a 204 Pfam PF11724 YvbH-like oligomerisation region 144 204 6.5E-25 T 11-10-2018 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain UP17_22840 1cf49a8bb9e170e4ed01b17ba2ae009a 204 Pfam PF08000 Bacterial PH domain 10 132 1.3E-33 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain UP17_21915 28ba6c02909788cc7de6100092e10a84 638 SMART SM00327 443 634 6.8E-10 T 11-10-2018 IPR002035 von Willebrand factor, type A UP17_21915 28ba6c02909788cc7de6100092e10a84 638 Gene3D G3DSA:3.40.50.410 444 632 5.5E-8 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily UP17_21915 28ba6c02909788cc7de6100092e10a84 638 SUPERFAMILY SSF53300 447 632 9.76E-14 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily UP17_15795 b5d90e6ed2d1e6bb99e26df3bb54e10d 187 SUPERFAMILY SSF55729 9 184 1.14E-40 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_15795 b5d90e6ed2d1e6bb99e26df3bb54e10d 187 Gene3D G3DSA:3.40.630.30 5 185 7.5E-43 T 11-10-2018 UP17_15795 b5d90e6ed2d1e6bb99e26df3bb54e10d 187 Pfam PF13302 Acetyltransferase (GNAT) domain 16 159 1.6E-24 T 11-10-2018 IPR000182 GNAT domain UP17_10055 e26282b4ce4579856442ab0a29188f25 299 Pfam PF03466 LysR substrate binding domain 90 290 4.1E-36 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_10055 e26282b4ce4579856442ab0a29188f25 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10055 e26282b4ce4579856442ab0a29188f25 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10055 e26282b4ce4579856442ab0a29188f25 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10055 e26282b4ce4579856442ab0a29188f25 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.9E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10055 e26282b4ce4579856442ab0a29188f25 299 Gene3D G3DSA:1.10.10.10 1 91 2.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10055 e26282b4ce4579856442ab0a29188f25 299 SUPERFAMILY SSF46785 1 85 2.72E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10055 e26282b4ce4579856442ab0a29188f25 299 SUPERFAMILY SSF53850 90 294 2.29E-32 T 11-10-2018 UP17_10055 e26282b4ce4579856442ab0a29188f25 299 Gene3D G3DSA:3.40.190.290 92 294 2.3E-43 T 11-10-2018 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 686 2.6E-247 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 686 26.881 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 553 4.4E-209 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 SUPERFAMILY SSF109604 335 490 2.93E-16 T 11-10-2018 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 1.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_16660 1599bf074c43cdb2941aca54d1bb4566 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 1.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 UP17_05120 350f5d0800bc14e19e7cf7dbad77a1dd 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 5.3E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_05120 350f5d0800bc14e19e7cf7dbad77a1dd 463 Gene3D G3DSA:3.40.640.10 94 456 8.2E-119 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_05120 350f5d0800bc14e19e7cf7dbad77a1dd 463 Pfam PF00155 Aminotransferase class I and II 124 453 2.2E-15 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_05120 350f5d0800bc14e19e7cf7dbad77a1dd 463 SUPERFAMILY SSF46785 9 88 1.54E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_05120 350f5d0800bc14e19e7cf7dbad77a1dd 463 SUPERFAMILY SSF53383 74 462 3.96E-78 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05120 350f5d0800bc14e19e7cf7dbad77a1dd 463 SMART SM00345 20 79 7.6E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_05120 350f5d0800bc14e19e7cf7dbad77a1dd 463 Gene3D G3DSA:1.10.10.10 2 87 1.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09630 568dee56f450485fd40c8712bdac6b6d 253 SUPERFAMILY SSF142695 82 225 1.02E-44 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 UP17_09630 568dee56f450485fd40c8712bdac6b6d 253 Pfam PF00925 GTP cyclohydrolase II 79 223 1.5E-46 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 UP17_09630 568dee56f450485fd40c8712bdac6b6d 253 Gene3D G3DSA:3.40.50.10990 68 225 8.6E-54 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 UP17_09135 73a620b796e486863d3e127650445ab8 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_09135 73a620b796e486863d3e127650445ab8 485 Pfam PF00171 Aldehyde dehydrogenase family 7 471 1.2E-179 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_09135 73a620b796e486863d3e127650445ab8 485 Gene3D G3DSA:3.40.309.10 248 441 1.7E-185 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_09135 73a620b796e486863d3e127650445ab8 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_09135 73a620b796e486863d3e127650445ab8 485 Gene3D G3DSA:3.40.605.10 6 465 1.7E-185 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_09135 73a620b796e486863d3e127650445ab8 485 SUPERFAMILY SSF53720 1 474 3.01E-171 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_17195 bf69458dba7ed58b079e0c5e48ad3a01 417 Pfam PF04932 O-Antigen ligase 200 332 6.7E-10 T 11-10-2018 IPR007016 O-antigen ligase-related UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 431 8.1E-35 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 Gene3D G3DSA:3.40.50.300 171 352 1.0E-53 T 11-10-2018 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 Hamap MF_00195 GTPase Der [der]. 3 436 41.096 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 SUPERFAMILY SSF52540 138 435 1.78E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 Gene3D G3DSA:3.40.50.300 1 163 3.4E-46 T 11-10-2018 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 SUPERFAMILY SSF52540 5 167 1.1E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 2.5E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 2.5E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 430 1.3E-177 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 Pfam PF01926 50S ribosome-binding GTPase 179 295 2.7E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 2.6E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 PIRSF PIRSF006485 2 436 2.2E-171 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 Gene3D G3DSA:3.30.300.20 353 436 3.8E-36 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 149 7.0E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_15480 4c2aba93160755fdb2d1fda74f9326db 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 340 1.8E-27 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_16980 83f0afcad2fb9ab5297f1ea6e301689f 309 Pfam PF01136 Peptidase family U32 75 306 2.0E-67 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 UP17_16980 83f0afcad2fb9ab5297f1ea6e301689f 309 SUPERFAMILY SSF102114 14 94 1.96E-6 T 11-10-2018 UP17_20390 1c85089238d4daa86c2c1e4588b7f1e4 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 202 3.2E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_20390 1c85089238d4daa86c2c1e4588b7f1e4 216 SUPERFAMILY SSF161098 8 200 1.44E-44 T 11-10-2018 IPR035906 MetI-like superfamily UP17_20390 1c85089238d4daa86c2c1e4588b7f1e4 216 Gene3D G3DSA:1.10.3720.10 3 216 1.8E-46 T 11-10-2018 IPR035906 MetI-like superfamily UP17_19965 21c382e98bf263145d65631e7ca84d19 110 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 105 2.5E-24 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD UP17_19965 21c382e98bf263145d65631e7ca84d19 110 PIRSF PIRSF003203 1 110 5.6E-43 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 190 379 2.1E-31 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 SUPERFAMILY SSF81606 177 378 5.23E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 SMART SM00331 163 379 1.8E-22 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 Pfam PF00072 Response regulator receiver domain 3 123 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 SMART SM00448 1 122 3.6E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 Gene3D G3DSA:3.60.40.10 135 379 1.1E-46 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 Gene3D G3DSA:3.40.50.2300 1 128 9.1E-35 T 11-10-2018 UP17_01250 51a5b8f91e1594e20ddaf531a259a764 380 SUPERFAMILY SSF52172 1 133 1.99E-33 T 11-10-2018 IPR011006 CheY-like superfamily UP17_08715 db05689a7d4f474f091d28b6d03d0f0d 197 Pfam PF03992 Antibiotic biosynthesis monooxygenase 22 90 1.2E-6 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain UP17_08715 db05689a7d4f474f091d28b6d03d0f0d 197 Gene3D G3DSA:3.30.70.100 21 116 2.1E-8 T 11-10-2018 UP17_08715 db05689a7d4f474f091d28b6d03d0f0d 197 SUPERFAMILY SSF54909 22 107 1.82E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_04870 ed1bf1246ac0075dfd661ea0989c2366 459 TIGRFAM TIGR03178 allantoinase: allantoinase 5 448 1.1E-166 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 UP17_04870 ed1bf1246ac0075dfd661ea0989c2366 459 Hamap MF_01645 Allantoinase [allB]. 3 450 48.719 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 UP17_04870 ed1bf1246ac0075dfd661ea0989c2366 459 SUPERFAMILY SSF51556 56 379 2.73E-89 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_04870 ed1bf1246ac0075dfd661ea0989c2366 459 Pfam PF01979 Amidohydrolase family 53 433 5.8E-23 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 UP17_04870 ed1bf1246ac0075dfd661ea0989c2366 459 Gene3D G3DSA:2.30.40.10 6 434 6.3E-138 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_04870 ed1bf1246ac0075dfd661ea0989c2366 459 SUPERFAMILY SSF51338 4 438 1.04E-26 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_04870 ed1bf1246ac0075dfd661ea0989c2366 459 Gene3D G3DSA:3.20.20.140 55 419 6.3E-138 T 11-10-2018 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 138 5.7E-33 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 SUPERFAMILY SSF51735 146 301 1.2E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 Gene3D G3DSA:3.40.50.720 157 291 3.8E-117 T 11-10-2018 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 7 345 7.3E-156 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 SMART SM00829 16 344 1.8E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 Gene3D G3DSA:3.90.180.10 22 336 3.8E-117 T 11-10-2018 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 Pfam PF00107 Zinc-binding dehydrogenase 178 306 6.0E-28 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_08210 11cf3e03215a6ae324016a371db24ef4 346 SUPERFAMILY SSF50129 4 177 4.11E-49 T 11-10-2018 IPR011032 GroES-like superfamily UP17_20935 7b63dd5d3a5eac66ae3b44b985000934 416 Gene3D G3DSA:1.20.1250.20 203 400 2.6E-23 T 11-10-2018 UP17_20935 7b63dd5d3a5eac66ae3b44b985000934 416 SUPERFAMILY SSF103473 3 395 9.81E-61 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_20935 7b63dd5d3a5eac66ae3b44b985000934 416 Gene3D G3DSA:1.20.1250.20 2 192 1.1E-30 T 11-10-2018 UP17_20935 7b63dd5d3a5eac66ae3b44b985000934 416 Pfam PF07690 Major Facilitator Superfamily 16 358 2.7E-40 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_21145 53fd995e6661e409ab01608e6cbbe099 585 Gene3D G3DSA:3.30.300.30 460 585 6.9E-45 T 11-10-2018 UP17_21145 53fd995e6661e409ab01608e6cbbe099 585 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_21145 53fd995e6661e409ab01608e6cbbe099 585 SUPERFAMILY SSF56801 12 577 4.32E-107 T 11-10-2018 UP17_21145 53fd995e6661e409ab01608e6cbbe099 585 Gene3D G3DSA:3.40.50.12780 3 459 4.5E-151 T 11-10-2018 UP17_21145 53fd995e6661e409ab01608e6cbbe099 585 Pfam PF00501 AMP-binding enzyme 21 465 3.2E-86 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_04750 a07d23966732a4410a2cf2971666d188 139 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 134 8.3E-23 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I UP17_04750 a07d23966732a4410a2cf2971666d188 139 SUPERFAMILY SSF52788 4 135 2.49E-44 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily UP17_04750 a07d23966732a4410a2cf2971666d188 139 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 6 134 1.7E-70 T 11-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 UP17_04750 a07d23966732a4410a2cf2971666d188 139 Hamap MF_01624 Arsenate reductase [arsC]. 1 137 45.337 T 11-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 UP17_04750 a07d23966732a4410a2cf2971666d188 139 SMART SM00226 4 137 5.4E-57 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I UP17_04750 a07d23966732a4410a2cf2971666d188 139 Gene3D G3DSA:3.40.50.2300 1 139 1.1E-56 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Pfam PF00873 AcrB/AcrD/AcrF family 6 989 9.0E-190 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 SUPERFAMILY SSF82693 149 303 5.23E-7 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:1.20.1640.10 493 986 4.1E-237 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 SUPERFAMILY SSF82866 285 480 4.84E-39 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:3.30.70.1430 538 635 4.1E-237 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:3.30.70.1320 133 318 4.1E-237 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 SUPERFAMILY SSF82866 807 993 9.16E-44 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 PRINTS PR00702 Acriflavin resistance protein family signature 322 345 2.7E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 2.7E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 PRINTS PR00702 Acriflavin resistance protein family signature 377 401 2.7E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 PRINTS PR00702 Acriflavin resistance protein family signature 349 370 2.7E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.7E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.7E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 PRINTS PR00702 Acriflavin resistance protein family signature 430 453 2.7E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 SUPERFAMILY SSF82693 42 132 1.52E-17 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 SUPERFAMILY SSF82714 183 257 2.22E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:1.20.1640.10 11 492 4.1E-237 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:3.30.70.1430 41 774 4.1E-237 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:3.30.2090.10 177 262 4.1E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:3.30.70.1440 636 829 4.1E-237 T 11-10-2018 UP17_19460 2d9df3d2ac8a661f8e0d1a05f95f399f 1011 Gene3D G3DSA:3.30.2090.10 685 766 4.1E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains UP17_02545 9be9f0fc8aa9e584885746ff19ccf721 73 Gene3D G3DSA:1.10.287.950 1 70 3.4E-7 T 11-10-2018 UP17_02545 9be9f0fc8aa9e584885746ff19ccf721 73 SUPERFAMILY SSF58104 5 64 3.66E-7 T 11-10-2018 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 SUPERFAMILY SSF52540 197 367 4.07E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.9E-31 T 11-10-2018 IPR032305 GTP-binding protein, middle domain UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 Gene3D G3DSA:3.40.50.300 199 361 6.2E-34 T 11-10-2018 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 Hamap MF_00900 GTPase HflX [hflX]. 27 385 46.934 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 Pfam PF01926 50S ribosome-binding GTPase 199 308 5.7E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 Pfam PF13167 GTP-binding GTPase N-terminal 24 112 2.2E-34 T 11-10-2018 IPR025121 GTPase HflX, N-terminal UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 PIRSF PIRSF006809 1 413 2.2E-151 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 Gene3D G3DSA:3.40.50.11060 17 138 1.9E-43 T 11-10-2018 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 9 355 2.9E-146 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_08375 1d684ca28a678fe139df6fa49e2d49db 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_19940 ab95dfd871b270335d9c455f43e9d7f8 389 Pfam PF00144 Beta-lactamase 64 374 4.8E-67 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_19940 ab95dfd871b270335d9c455f43e9d7f8 389 SUPERFAMILY SSF56601 56 376 1.45E-79 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_19940 ab95dfd871b270335d9c455f43e9d7f8 389 Gene3D G3DSA:3.40.710.10 47 389 5.7E-137 T 11-10-2018 UP17_09830 9e40c531b4c3b1b8ce8fc54ec03ea1bc 447 Pfam PF00155 Aminotransferase class I and II 97 432 1.2E-25 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_09830 9e40c531b4c3b1b8ce8fc54ec03ea1bc 447 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.0E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09830 9e40c531b4c3b1b8ce8fc54ec03ea1bc 447 Gene3D G3DSA:3.40.640.10 69 433 2.2E-81 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_09830 9e40c531b4c3b1b8ce8fc54ec03ea1bc 447 SMART SM00345 7 66 2.5E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_09830 9e40c531b4c3b1b8ce8fc54ec03ea1bc 447 SUPERFAMILY SSF46785 3 76 7.28E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09830 9e40c531b4c3b1b8ce8fc54ec03ea1bc 447 Gene3D G3DSA:1.10.10.10 1 68 3.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09830 9e40c531b4c3b1b8ce8fc54ec03ea1bc 447 SUPERFAMILY SSF53383 58 439 3.39E-68 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_17555 720c6431a90031cf319e8babd23ce82b 267 PIRSF PIRSF003092 1 267 1.7E-85 T 11-10-2018 IPR025501 ATP binding protein MinD UP17_17555 720c6431a90031cf319e8babd23ce82b 267 Gene3D G3DSA:3.40.50.300 3 248 3.4E-68 T 11-10-2018 UP17_17555 720c6431a90031cf319e8babd23ce82b 267 SUPERFAMILY SSF52540 5 264 2.81E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17555 720c6431a90031cf319e8babd23ce82b 267 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 264 3.9E-115 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 UP17_17555 720c6431a90031cf319e8babd23ce82b 267 Pfam PF13614 AAA domain 4 162 5.1E-26 T 11-10-2018 IPR025669 AAA domain UP17_21615 8e80434b7cce35bd2f69625e7b8a9534 201 Gene3D G3DSA:1.10.510.10 26 168 1.2E-7 T 11-10-2018 UP17_21615 8e80434b7cce35bd2f69625e7b8a9534 201 SUPERFAMILY SSF56112 28 160 3.13E-14 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_08525 f1550172f149a5596815847fc0eb8299 490 SUPERFAMILY SSF49899 338 484 8.7E-33 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily UP17_08525 f1550172f149a5596815847fc0eb8299 490 Gene3D G3DSA:2.115.10.20 3 353 5.0E-112 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily UP17_08525 f1550172f149a5596815847fc0eb8299 490 SMART SM00640 37 454 1.3E-161 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 UP17_08525 f1550172f149a5596815847fc0eb8299 490 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 22 464 1.4E-187 T 11-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 UP17_08525 f1550172f149a5596815847fc0eb8299 490 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 37 50 - T 11-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 UP17_08525 f1550172f149a5596815847fc0eb8299 490 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 37 338 2.4E-103 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal UP17_08525 f1550172f149a5596815847fc0eb8299 490 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 341 484 2.2E-29 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal UP17_08525 f1550172f149a5596815847fc0eb8299 490 SUPERFAMILY SSF75005 30 339 7.69E-110 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily UP17_08525 f1550172f149a5596815847fc0eb8299 490 Gene3D G3DSA:2.60.120.560 354 488 2.0E-30 T 11-10-2018 UP17_02050 59e57427fcf231d3d87dfb63db3b4205 96 Gene3D G3DSA:1.10.20.60 1 94 7.7E-31 T 11-10-2018 UP17_02050 59e57427fcf231d3d87dfb63db3b4205 96 SUPERFAMILY SSF141000 4 94 6.41E-32 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 UP17_02050 59e57427fcf231d3d87dfb63db3b4205 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 4.1E-21 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 UP17_02050 59e57427fcf231d3d87dfb63db3b4205 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 25.075 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 UP17_02050 59e57427fcf231d3d87dfb63db3b4205 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 2.0E-33 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 UP17_05065 b8ac549ef2e7a1bf6cd7cad16a2967a2 309 Gene3D G3DSA:3.90.1640.10 1 188 9.1E-81 T 11-10-2018 UP17_05065 b8ac549ef2e7a1bf6cd7cad16a2967a2 309 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 46.026 T 11-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_05065 b8ac549ef2e7a1bf6cd7cad16a2967a2 309 Pfam PF02833 DHHA2 domain 183 305 4.7E-20 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_05065 b8ac549ef2e7a1bf6cd7cad16a2967a2 309 Gene3D G3DSA:3.10.310.20 190 309 2.1E-36 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_05065 b8ac549ef2e7a1bf6cd7cad16a2967a2 309 SUPERFAMILY SSF64182 2 306 1.14E-81 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily UP17_05065 b8ac549ef2e7a1bf6cd7cad16a2967a2 309 SMART SM01131 181 307 3.1E-50 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_05065 b8ac549ef2e7a1bf6cd7cad16a2967a2 309 Pfam PF01368 DHH family 3 146 1.0E-30 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Gene3D G3DSA:3.40.930.10 545 681 1.6E-11 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Pfam PF00874 PRD domain 216 287 5.6E-6 T 11-10-2018 IPR011608 PRD domain GO:0006355 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Pfam PF00874 PRD domain 310 398 1.1E-18 T 11-10-2018 IPR011608 PRD domain GO:0006355 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Gene3D G3DSA:1.10.1790.10 197 290 1.0E-5 T 11-10-2018 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Gene3D G3DSA:1.10.1790.10 304 400 3.5E-16 T 11-10-2018 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 SUPERFAMILY SSF55804 533 677 1.57E-13 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Pfam PF05043 Mga helix-turn-helix domain 91 165 1.2E-7 T 11-10-2018 IPR007737 Mga helix-turn-helix domain UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 410 495 1.3E-8 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 SUPERFAMILY SSF63520 306 399 1.44E-18 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 548 675 5.7E-10 T 11-10-2018 IPR002178 PTS EIIA type-2 domain UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Pfam PF08279 HTH domain 6 58 1.5E-8 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Gene3D G3DSA:1.10.10.10 3 86 3.8E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 SUPERFAMILY SSF52794 408 487 2.46E-10 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 SUPERFAMILY SSF63520 189 287 5.23E-7 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 UP17_19160 aeab99ead46e9f79dfbd0752e48109f1 694 Gene3D G3DSA:3.40.50.2300 408 495 8.6E-12 T 11-10-2018 UP17_04840 594d9a2960ee86852970c14ee757875e 451 Gene3D G3DSA:1.20.1740.10 5 441 1.0E-74 T 11-10-2018 UP17_04840 594d9a2960ee86852970c14ee757875e 451 Pfam PF00324 Amino acid permease 16 401 7.0E-34 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_04840 594d9a2960ee86852970c14ee757875e 451 PIRSF PIRSF006060 1 450 2.6E-71 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 ProSitePatterns PS00217 Sugar transport proteins signature 2. 324 349 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 Gene3D G3DSA:1.20.1250.20 5 403 2.6E-64 T 11-10-2018 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 SUPERFAMILY SSF103473 14 406 1.44E-61 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 Pfam PF07690 Major Facilitator Superfamily 25 320 1.0E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 85 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 PRINTS PR01035 Tetracycline resistance protein signature 290 311 3.2E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 PRINTS PR01035 Tetracycline resistance protein signature 25 41 3.2E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 PRINTS PR01035 Tetracycline resistance protein signature 175 195 3.2E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_19595 34e192cf323bf2fa1d6a5e6ce7525d9f 410 PRINTS PR01035 Tetracycline resistance protein signature 147 169 3.2E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_12340 b75572a84c2908750149d7a088636a50 278 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 8 267 6.8E-137 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 UP17_12340 b75572a84c2908750149d7a088636a50 278 SUPERFAMILY SSF56276 48 179 2.9E-23 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 UP17_12340 b75572a84c2908750149d7a088636a50 278 Pfam PF02675 S-adenosylmethionine decarboxylase 40 175 8.3E-29 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 UP17_12340 b75572a84c2908750149d7a088636a50 278 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 277 156.908 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 UP17_12340 b75572a84c2908750149d7a088636a50 278 PIRSF PIRSF001356 3 269 4.3E-136 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 UP17_12340 b75572a84c2908750149d7a088636a50 278 Gene3D G3DSA:3.60.90.10 110 186 8.0E-7 T 11-10-2018 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 473 39.014 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 472 2.0E-181 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 SUPERFAMILY SSF55931 4 293 1.24E-120 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 Pfam PF02934 GatB/GatE catalytic domain 5 284 1.6E-111 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 Gene3D G3DSA:1.10.150.380 297 410 1.1E-38 T 11-10-2018 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 Pfam PF02637 GatB domain 325 472 5.6E-57 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 SMART SM00845 325 472 1.2E-82 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 Gene3D G3DSA:1.10.10.410 412 475 2.1E-27 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 SUPERFAMILY SSF89095 294 399 4.54E-37 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 UP17_02060 3bfbfad1c1b619514b8c9d66396672ba 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 UP17_21745 53b968ce775a479b58f82be6b114c331 594 SUPERFAMILY SSF46894 526 591 1.53E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_21745 53b968ce775a479b58f82be6b114c331 594 ProSitePatterns PS00622 LuxR-type HTH domain signature. 546 573 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_21745 53b968ce775a479b58f82be6b114c331 594 Gene3D G3DSA:3.40.50.12740 380 591 1.8E-58 T 11-10-2018 UP17_21745 53b968ce775a479b58f82be6b114c331 594 Pfam PF00196 Bacterial regulatory proteins, luxR family 532 586 2.3E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_21745 53b968ce775a479b58f82be6b114c331 594 SMART SM00448 380 493 2.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_21745 53b968ce775a479b58f82be6b114c331 594 Pfam PF07730 Histidine kinase 181 244 4.6E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 UP17_21745 53b968ce775a479b58f82be6b114c331 594 SUPERFAMILY SSF52172 380 509 2.56E-31 T 11-10-2018 IPR011006 CheY-like superfamily UP17_21745 53b968ce775a479b58f82be6b114c331 594 Gene3D G3DSA:3.30.565.10 246 371 5.9E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_21745 53b968ce775a479b58f82be6b114c331 594 Pfam PF00072 Response regulator receiver domain 383 493 2.4E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_21745 53b968ce775a479b58f82be6b114c331 594 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 546 562 4.0E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_21745 53b968ce775a479b58f82be6b114c331 594 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 562 574 4.0E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_21745 53b968ce775a479b58f82be6b114c331 594 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 532 546 4.0E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_21745 53b968ce775a479b58f82be6b114c331 594 SMART SM00387 283 373 2.0E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_21745 53b968ce775a479b58f82be6b114c331 594 SMART SM00421 529 586 2.6E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_21745 53b968ce775a479b58f82be6b114c331 594 SUPERFAMILY SSF55874 249 370 2.46E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 SUPERFAMILY SSF56784 4 212 1.58E-56 T 11-10-2018 IPR036412 HAD-like superfamily UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 Gene3D G3DSA:1.10.150.240 19 82 3.2E-53 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.9E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 2.9E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 2.9E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 2.9E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 95 177 1.2E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 Gene3D G3DSA:3.40.50.1000 8 203 3.2E-53 T 11-10-2018 IPR023214 HAD superfamily UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 3 216 44.119 T 11-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 UP17_23595 0e228c45b46480ccb771e9e4a3641381 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 4.1E-53 T 11-10-2018 UP17_05770 f72e4d8c63c6dc71ecd24fe5bcdbd6e2 188 Pfam PF10949 Protein of unknown function (DUF2777) 4 183 3.8E-63 T 11-10-2018 IPR024488 Protein of unknown function DUF2777 UP17_05770 f72e4d8c63c6dc71ecd24fe5bcdbd6e2 188 ProDom PD106196 YISN IG BH1722 5 178 7.0E-31 T 11-10-2018 IPR024488 Protein of unknown function DUF2777 UP17_11580 9b79de53941031f6e5728628d8d107e5 317 Pfam PF00892 EamA-like transporter family 8 139 2.2E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_11580 9b79de53941031f6e5728628d8d107e5 317 Pfam PF00892 EamA-like transporter family 151 294 1.6E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_11580 9b79de53941031f6e5728628d8d107e5 317 SUPERFAMILY SSF103481 42 142 8.37E-12 T 11-10-2018 UP17_11580 9b79de53941031f6e5728628d8d107e5 317 SUPERFAMILY SSF103481 212 298 7.19E-11 T 11-10-2018 UP17_12895 e213df4d86fbeb3975a9c091f2f47d27 246 Pfam PF03591 AzlC protein 31 171 9.1E-39 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease UP17_14460 e333ab95c648c9c58e90dc2dfddfef99 231 Gene3D G3DSA:3.40.50.150 26 231 1.3E-51 T 11-10-2018 UP17_14460 e333ab95c648c9c58e90dc2dfddfef99 231 Pfam PF08241 Methyltransferase domain 53 146 1.1E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 UP17_14460 e333ab95c648c9c58e90dc2dfddfef99 231 SUPERFAMILY SSF53335 8 194 1.41E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_04875 ccb70bfac961d3365c4091296ab7d511 148 Gene3D G3DSA:3.10.129.10 10 147 3.3E-37 T 11-10-2018 UP17_04875 ccb70bfac961d3365c4091296ab7d511 148 Pfam PF03061 Thioesterase superfamily 56 127 3.8E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_04875 ccb70bfac961d3365c4091296ab7d511 148 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 26 128 1.1E-18 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 UP17_04875 ccb70bfac961d3365c4091296ab7d511 148 SUPERFAMILY SSF54637 22 138 8.7E-29 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_03395 b6ec7e92585aecedcc54839ae8dfaf67 562 SUPERFAMILY SSF161098 5 281 2.62E-56 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03395 b6ec7e92585aecedcc54839ae8dfaf67 562 SUPERFAMILY SSF161098 291 554 1.02E-56 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03395 b6ec7e92585aecedcc54839ae8dfaf67 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 277 5.6E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_03395 b6ec7e92585aecedcc54839ae8dfaf67 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 370 550 1.0E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_03395 b6ec7e92585aecedcc54839ae8dfaf67 562 Gene3D G3DSA:1.10.3720.10 294 559 2.6E-57 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03395 b6ec7e92585aecedcc54839ae8dfaf67 562 Gene3D G3DSA:1.10.3720.10 8 280 1.9E-65 T 11-10-2018 IPR035906 MetI-like superfamily UP17_04305 09258ec68274399073cfe85d07067a1a 329 Gene3D G3DSA:3.40.50.720 51 321 6.6E-93 T 11-10-2018 UP17_04305 09258ec68274399073cfe85d07067a1a 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 115 292 6.4E-56 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 UP17_04305 09258ec68274399073cfe85d07067a1a 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 23 323 2.4E-10 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 UP17_04305 09258ec68274399073cfe85d07067a1a 329 SUPERFAMILY SSF52283 12 139 2.43E-11 T 11-10-2018 UP17_04305 09258ec68274399073cfe85d07067a1a 329 Gene3D G3DSA:3.40.50.720 108 298 6.6E-93 T 11-10-2018 UP17_04305 09258ec68274399073cfe85d07067a1a 329 SUPERFAMILY SSF51735 109 293 3.45E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_20100 cdd51fd13c9b8e1c6bc3d1f37fc3398e 573 Pfam PF04740 LXG domain of WXG superfamily 4 196 4.9E-40 T 11-10-2018 IPR006829 LXG domain UP17_20100 cdd51fd13c9b8e1c6bc3d1f37fc3398e 573 Pfam PF14436 Bacterial EndoU nuclease 459 570 2.9E-21 T 11-10-2018 IPR029501 Bacterial EndoU nuclease UP17_05235 ead796065f64f90443c5b14659e97551 458 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_05235 ead796065f64f90443c5b14659e97551 458 PIRSF PIRSF006060 1 457 6.8E-75 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_05235 ead796065f64f90443c5b14659e97551 458 Pfam PF00324 Amino acid permease 16 417 7.1E-89 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_05235 ead796065f64f90443c5b14659e97551 458 Gene3D G3DSA:1.20.1740.10 8 456 1.0E-58 T 11-10-2018 UP17_02820 6f1a16c1d3e2d350a28ec5eb0029fe06 422 Gene3D G3DSA:3.30.360.30 186 368 2.1E-5 T 11-10-2018 IPR023181 Homospermidine synthase-like, C-terminal KEGG: 00960+2.5.1.44 UP17_02820 6f1a16c1d3e2d350a28ec5eb0029fe06 422 Gene3D G3DSA:3.40.50.720 2 178 1.9E-11 T 11-10-2018 UP17_10560 d1f0ffd0a7cf433c0a6e609b7d7f698a 413 Gene3D G3DSA:3.20.20.70 1 365 6.5E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_10560 d1f0ffd0a7cf433c0a6e609b7d7f698a 413 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 18 345 3.4E-58 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 UP17_10560 d1f0ffd0a7cf433c0a6e609b7d7f698a 413 SUPERFAMILY SSF51395 4 345 1.86E-101 T 11-10-2018 UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 Gene3D G3DSA:1.10.10.10 9 76 7.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 Pfam PF07729 FCD domain 85 205 2.7E-15 T 11-10-2018 IPR011711 GntR, C-terminal UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 SMART SM00345 17 75 1.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 SUPERFAMILY SSF48008 81 214 1.15E-18 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.3E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 SUPERFAMILY SSF46785 10 90 7.66E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 SMART SM00895 85 206 1.4E-14 T 11-10-2018 IPR011711 GntR, C-terminal UP17_12225 8f2138d383cb74b7a25fdba8709c2922 224 Gene3D G3DSA:1.20.120.530 79 217 7.2E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_12825 f43aed7a848526065f9ad75582fdb812 138 Gene3D G3DSA:1.10.10.10 14 81 2.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12825 f43aed7a848526065f9ad75582fdb812 138 PIRSF PIRSF019455 14 138 1.1E-22 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 UP17_12825 f43aed7a848526065f9ad75582fdb812 138 Pfam PF03965 Penicillinase repressor 18 131 3.4E-25 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 UP17_12825 f43aed7a848526065f9ad75582fdb812 138 SUPERFAMILY SSF46785 18 134 6.42E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 SUPERFAMILY SSF46894 133 230 5.39E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 SMART SM00862 153 229 1.4E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 Gene3D G3DSA:3.40.50.2300 1 129 2.5E-30 T 11-10-2018 UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 SUPERFAMILY SSF52172 3 128 1.27E-34 T 11-10-2018 IPR011006 CheY-like superfamily UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 Gene3D G3DSA:1.10.10.10 130 233 1.1E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 Pfam PF00072 Response regulator receiver domain 7 116 1.4E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 3.9E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_03580 4737c2afb45afbc916a6a4bee961deb3 233 SMART SM00448 5 116 1.5E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 SUPERFAMILY SSF81606 130 333 5.89E-9 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 2.0E-22 T 11-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 Gene3D G3DSA:1.10.1240.30 1 84 3.1E-28 T 11-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 9 83 5.2E-27 T 11-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 146 333 4.7E-51 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 SUPERFAMILY SSF101215 2 84 7.85E-25 T 11-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 SMART SM00331 119 334 6.2E-61 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01405 73787e0c14e3cedeb04e2d6ed9c48148 336 Gene3D G3DSA:3.60.40.10 86 334 4.9E-57 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_10360 d236a98102b0eea8249b403b2057bc14 292 SUPERFAMILY SSF53850 93 292 3.5E-40 T 11-10-2018 UP17_10360 d236a98102b0eea8249b403b2057bc14 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10360 d236a98102b0eea8249b403b2057bc14 292 Gene3D G3DSA:1.10.10.10 1 90 2.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10360 d236a98102b0eea8249b403b2057bc14 292 Gene3D G3DSA:3.40.190.10 93 276 1.1E-42 T 11-10-2018 UP17_10360 d236a98102b0eea8249b403b2057bc14 292 SUPERFAMILY SSF46785 2 83 2.01E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10360 d236a98102b0eea8249b403b2057bc14 292 Pfam PF03466 LysR substrate binding domain 93 291 2.3E-43 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_10360 d236a98102b0eea8249b403b2057bc14 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10360 d236a98102b0eea8249b403b2057bc14 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10360 d236a98102b0eea8249b403b2057bc14 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10360 d236a98102b0eea8249b403b2057bc14 292 Gene3D G3DSA:3.40.190.10 164 269 1.1E-42 T 11-10-2018 UP17_11125 78c128246ca6199f50701d02f588e3ca 254 Gene3D G3DSA:3.90.79.10 10 176 5.3E-51 T 11-10-2018 UP17_11125 78c128246ca6199f50701d02f588e3ca 254 SUPERFAMILY SSF46785 174 250 2.72E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_11125 78c128246ca6199f50701d02f588e3ca 254 Pfam PF00293 NUDIX domain 40 155 1.8E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_11125 78c128246ca6199f50701d02f588e3ca 254 Gene3D G3DSA:1.10.10.10 177 251 3.6E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_11125 78c128246ca6199f50701d02f588e3ca 254 SUPERFAMILY SSF55811 40 171 1.76E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_11125 78c128246ca6199f50701d02f588e3ca 254 PRINTS PR00502 NUDIX hydrolase family signature 76 91 8.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_11125 78c128246ca6199f50701d02f588e3ca 254 PRINTS PR00502 NUDIX hydrolase family signature 62 76 8.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_11125 78c128246ca6199f50701d02f588e3ca 254 ProSitePatterns PS00893 Nudix box signature. 67 88 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 UP17_25230 43aa922b19cd32994637589e33b96ffa 271 Hamap MF_02077 Lipid II flippase Amj [amj]. 5 268 26.908 T 11-10-2018 IPR021260 Lipid II flippase Amj UP17_25230 43aa922b19cd32994637589e33b96ffa 271 Pfam PF10997 Alternate to MurJ 14 267 4.9E-99 T 11-10-2018 IPR021260 Lipid II flippase Amj UP17_04365 7a2281da1f6edea28877772e445fb42f 331 Gene3D G3DSA:3.40.50.1100 15 323 1.7E-108 T 11-10-2018 UP17_04365 7a2281da1f6edea28877772e445fb42f 331 SUPERFAMILY SSF53686 4 324 3.02E-87 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_04365 7a2281da1f6edea28877772e445fb42f 331 PIRSF PIRSF006278 1 330 8.0E-92 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase UP17_04365 7a2281da1f6edea28877772e445fb42f 331 Gene3D G3DSA:3.40.50.1100 48 156 1.7E-108 T 11-10-2018 UP17_04365 7a2281da1f6edea28877772e445fb42f 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 318 3.0E-56 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_04365 7a2281da1f6edea28877772e445fb42f 331 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 13 326 2.3E-98 T 11-10-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 PIRSF PIRSF016578 126 362 5.6E-10 T 11-10-2018 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 PIRSF PIRSF016578 5 97 0.003 T 11-10-2018 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 SUPERFAMILY SSF56645 1 242 1.57E-85 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 2.9E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 1.8E-24 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 SUPERFAMILY SSF47203 227 382 1.3E-49 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 Gene3D G3DSA:2.40.110.10 121 234 1.7E-41 T 11-10-2018 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 Gene3D G3DSA:1.20.140.10 235 382 2.3E-46 T 11-10-2018 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 Gene3D G3DSA:1.10.540.10 1 120 2.1E-40 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_06235 927996688ea6a226c2218f1ba5fa8cfe 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 370 6.5E-44 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_08265 859162c7daa9deffaa9687150dd9407f 202 SUPERFAMILY SSF53335 21 139 3.23E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_08265 859162c7daa9deffaa9687150dd9407f 202 Pfam PF13679 Methyltransferase domain 48 101 1.3E-7 T 11-10-2018 IPR025714 Methyltransferase domain UP17_08265 859162c7daa9deffaa9687150dd9407f 202 Gene3D G3DSA:3.40.50.150 24 163 9.0E-17 T 11-10-2018 UP17_16075 7db397a2c161f98d2c856350d0233c50 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 99 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site UP17_16075 7db397a2c161f98d2c856350d0233c50 297 Pfam PF00348 Polyprenyl synthetase 33 269 2.8E-59 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 UP17_16075 7db397a2c161f98d2c856350d0233c50 297 SUPERFAMILY SSF48576 11 276 2.16E-87 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily UP17_16075 7db397a2c161f98d2c856350d0233c50 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 216 228 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site UP17_16075 7db397a2c161f98d2c856350d0233c50 297 Gene3D G3DSA:1.10.600.10 3 297 1.2E-107 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily UP17_15960 b31c90784a4b763ae0ba26a9c09aaba4 219 Gene3D G3DSA:1.10.3720.10 1 219 4.3E-58 T 11-10-2018 IPR035906 MetI-like superfamily UP17_15960 b31c90784a4b763ae0ba26a9c09aaba4 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 2.1E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_15960 b31c90784a4b763ae0ba26a9c09aaba4 219 SUPERFAMILY SSF161098 13 217 9.68E-45 T 11-10-2018 IPR035906 MetI-like superfamily UP17_15960 b31c90784a4b763ae0ba26a9c09aaba4 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 2.8E-30 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 SUPERFAMILY SSF55307 204 316 6.18E-44 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 332 4.8E-139 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 Gene3D G3DSA:3.30.1330.20 221 325 7.0E-42 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 SMART SM00864 13 205 7.6E-117 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 Gene3D G3DSA:3.40.50.1440 4 220 1.3E-83 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 SMART SM00865 207 324 1.6E-55 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 7.6E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 372 39.485 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 SUPERFAMILY SSF52490 12 208 3.92E-72 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 UP17_07350 64b6df2790ca5588402077ebc92be78b 385 Pfam PF12327 FtsZ family, C-terminal domain 222 315 4.1E-33 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal UP17_07350 64b6df2790ca5588402077ebc92be78b 385 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 UP17_22510 3b9311531c7dec3f18ac6a4ac6108967 256 Pfam PF01925 Sulfite exporter TauE/SafE 13 246 2.4E-43 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Gene3D G3DSA:3.40.50.12780 4 402 3.0E-112 T 11-10-2018 UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 SUPERFAMILY SSF56801 7 501 2.22E-122 T 11-10-2018 UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 39 432 3.0E-113 T 11-10-2018 IPR010071 Amino acid adenylation domain UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Gene3D G3DSA:3.30.300.30 403 509 4.5E-26 T 11-10-2018 UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 SUPERFAMILY SSF47336 518 582 8.06E-11 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Gene3D G3DSA:1.10.1200.10 516 588 2.1E-12 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Pfam PF07993 Male sterility protein 624 852 9.2E-57 T 11-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 SUPERFAMILY SSF51735 620 878 1.68E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Gene3D G3DSA:3.40.50.720 594 968 6.9E-74 T 11-10-2018 UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Pfam PF13193 AMP-binding enzyme C-terminal domain 430 491 1.2E-6 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Pfam PF00550 Phosphopantetheine attachment site 519 581 4.7E-6 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 PRINTS PR00154 AMP-binding signature 164 172 8.9E-5 T 11-10-2018 IPR020459 AMP-binding UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 PRINTS PR00154 AMP-binding signature 152 163 8.9E-5 T 11-10-2018 IPR020459 AMP-binding UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 Pfam PF00501 AMP-binding enzyme 21 408 1.1E-87 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_03525 d80c815d0eb7db820bf36e2b2cacf77d 968 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 622 961 9.4E-80 T 11-10-2018 IPR010080 Thioester reductase-like domain UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 SMART SM00475 6 269 3.0E-117 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 10 159 2.4E-51 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 Gene3D G3DSA:1.10.150.20 182 254 1.1E-86 T 11-10-2018 UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 179 269 3.4E-30 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 SMART SM00279 181 216 1.8E-15 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 SUPERFAMILY SSF47807 179 289 6.13E-31 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 Gene3D G3DSA:3.40.50.1010 11 284 1.1E-86 T 11-10-2018 UP17_15040 a1ace01d447190e6d666b09a6f2e8e09 291 SUPERFAMILY SSF88723 9 161 3.92E-46 T 11-10-2018 IPR029060 PIN-like domain superfamily UP17_20255 01175ef9dd896b97bf50e43b4452918a 259 Gene3D G3DSA:3.10.180.10 6 225 7.9E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_20255 01175ef9dd896b97bf50e43b4452918a 259 SUPERFAMILY SSF54593 9 121 8.82E-9 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_22800 c12b8f40f8f0dc8a5c9befe7d31fed59 118 SUPERFAMILY SSF47413 2 66 1.31E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_22800 c12b8f40f8f0dc8a5c9befe7d31fed59 118 SMART SM00530 7 62 3.0E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_22800 c12b8f40f8f0dc8a5c9befe7d31fed59 118 Pfam PF01381 Helix-turn-helix 8 62 7.2E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_22800 c12b8f40f8f0dc8a5c9befe7d31fed59 118 Gene3D G3DSA:1.10.260.40 4 116 1.3E-17 T 11-10-2018 UP17_09470 1d7cd8ae2e14ad35ce79181e9df5c8df 478 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_09470 1d7cd8ae2e14ad35ce79181e9df5c8df 478 PIRSF PIRSF006060 3 474 1.5E-78 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_09470 1d7cd8ae2e14ad35ce79181e9df5c8df 478 Gene3D G3DSA:1.20.1740.10 10 474 6.8E-65 T 11-10-2018 UP17_09470 1d7cd8ae2e14ad35ce79181e9df5c8df 478 Pfam PF00324 Amino acid permease 20 463 4.1E-124 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 Pfam PF13181 Tetratricopeptide repeat 104 136 0.0014 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 Pfam PF13414 TPR repeat 41 80 3.2E-11 T 11-10-2018 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 Gene3D G3DSA:1.25.40.10 2 99 2.2E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 Pfam PF13432 Tetratricopeptide repeat 164 204 6.5E-5 T 11-10-2018 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 SMART SM00028 34 67 3.2E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 SMART SM00028 171 205 0.33 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 SMART SM00028 103 136 0.027 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 SMART SM00028 4 33 5.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 SMART SM00028 68 102 20.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 Gene3D G3DSA:1.25.40.10 100 221 3.0E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 Pfam PF07719 Tetratricopeptide repeat 5 32 3.5E-6 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 UP17_17050 8d89fff8493a21f5eae30154ba231494 221 SUPERFAMILY SSF48452 5 208 4.17E-40 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 Gene3D G3DSA:3.40.50.300 142 320 1.0E-58 T 11-10-2018 UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 Gene3D G3DSA:1.20.58.760 403 575 2.4E-40 T 11-10-2018 UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 SMART SM00382 185 321 2.4E-23 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 SUPERFAMILY SSF140990 405 567 4.19E-37 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 Gene3D G3DSA:1.10.8.60 321 399 5.6E-20 T 11-10-2018 UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 SUPERFAMILY SSF52540 147 396 1.42E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 318 8.3E-41 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_01185 53a76b3700d6c7425a90ebb358813b65 577 Pfam PF01434 Peptidase family M41 382 518 3.1E-29 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 UP17_16615 210e24e9dd6871104407d4bc3eadf781 372 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 350 4.3E-81 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 UP17_16615 210e24e9dd6871104407d4bc3eadf781 372 SUPERFAMILY SSF102705 5 371 3.79E-131 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily UP17_16615 210e24e9dd6871104407d4bc3eadf781 372 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 368 9.6E-91 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 UP17_16615 210e24e9dd6871104407d4bc3eadf781 372 PIRSF PIRSF037489 2 372 2.2E-156 T 11-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria UP17_16615 210e24e9dd6871104407d4bc3eadf781 372 Gene3D G3DSA:3.40.1390.30 1 125 9.0E-39 T 11-10-2018 UP17_16615 210e24e9dd6871104407d4bc3eadf781 372 Gene3D G3DSA:3.30.70.120 132 241 2.0E-43 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_09675 f47aec8234fdf1d5d24830de56427914 167 Gene3D G3DSA:1.20.120.450 1 167 1.9E-42 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_09675 f47aec8234fdf1d5d24830de56427914 167 SUPERFAMILY SSF109854 8 164 2.2E-24 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_09675 f47aec8234fdf1d5d24830de56427914 167 Pfam PF05163 DinB family 4 164 1.7E-29 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB UP17_18915 a26d9ac471417b6ffa5a319a086e58e7 156 Gene3D G3DSA:3.30.479.10 101 155 3.2E-9 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 UP17_18915 a26d9ac471417b6ffa5a319a086e58e7 156 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 31 151 3.1E-36 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 UP17_18915 a26d9ac471417b6ffa5a319a086e58e7 156 Gene3D G3DSA:3.30.479.10 25 100 4.3E-23 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 UP17_18915 a26d9ac471417b6ffa5a319a086e58e7 156 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 31 120 1.2E-30 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 UP17_18915 a26d9ac471417b6ffa5a319a086e58e7 156 PIRSF PIRSF006113 26 151 2.0E-27 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 UP17_18915 a26d9ac471417b6ffa5a319a086e58e7 156 SUPERFAMILY SSF55620 27 151 6.12E-38 T 11-10-2018 UP17_17725 59ef86860505385f6385aa62c723c011 511 Gene3D G3DSA:3.20.20.70 1 275 1.2E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_17725 59ef86860505385f6385aa62c723c011 511 SUPERFAMILY SSF51569 2 290 4.76E-94 T 11-10-2018 UP17_17725 59ef86860505385f6385aa62c723c011 511 Gene3D G3DSA:1.10.238.260 279 392 1.2E-39 T 11-10-2018 UP17_17725 59ef86860505385f6385aa62c723c011 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.3E-36 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 UP17_17725 59ef86860505385f6385aa62c723c011 511 Gene3D G3DSA:3.30.160.270 393 499 5.5E-12 T 11-10-2018 UP17_17725 59ef86860505385f6385aa62c723c011 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 496 1.7E-225 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 UP17_17725 59ef86860505385f6385aa62c723c011 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 UP17_17725 59ef86860505385f6385aa62c723c011 511 SUPERFAMILY SSF110921 392 498 1.44E-22 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 UP17_17725 59ef86860505385f6385aa62c723c011 511 Pfam PF00682 HMGL-like 3 272 4.0E-91 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 UP17_17725 59ef86860505385f6385aa62c723c011 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 UP17_17725 59ef86860505385f6385aa62c723c011 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 508 42.919 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 UP17_17725 59ef86860505385f6385aa62c723c011 511 SMART SM00917 368 499 2.2E-36 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 UP17_23715 328abf86343c360aaad20ba06b1b594c 185 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 94 1.0E-29 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 UP17_23715 328abf86343c360aaad20ba06b1b594c 185 Gene3D G3DSA:3.30.505.50 139 185 7.3E-27 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily UP17_23715 328abf86343c360aaad20ba06b1b594c 185 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 185 25.464 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid UP17_23715 328abf86343c360aaad20ba06b1b594c 185 SUPERFAMILY SSF69754 1 103 5.23E-35 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like UP17_23715 328abf86343c360aaad20ba06b1b594c 185 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 127 181 2.6E-28 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal UP17_23715 328abf86343c360aaad20ba06b1b594c 185 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 2.1E-34 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 UP17_23715 328abf86343c360aaad20ba06b1b594c 185 Gene3D G3DSA:3.30.160.100 1 97 1.8E-34 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like UP17_09245 f11fddc92208a0d92b670add8d312485 306 SUPERFAMILY SSF56112 18 269 1.4E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_09245 f11fddc92208a0d92b670add8d312485 306 Gene3D G3DSA:3.90.1200.10 110 275 6.9E-19 T 11-10-2018 UP17_09245 f11fddc92208a0d92b670add8d312485 306 Pfam PF01636 Phosphotransferase enzyme family 46 230 1.9E-27 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase UP17_09075 98fb871b5992b83f34f1be99b0b2a5f4 108 SUPERFAMILY SSF54909 1 106 3.99E-29 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_09075 98fb871b5992b83f34f1be99b0b2a5f4 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 36 85 5.0E-5 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain UP17_09075 98fb871b5992b83f34f1be99b0b2a5f4 108 Gene3D G3DSA:3.30.70.100 9 102 1.7E-36 T 11-10-2018 UP17_01970 e8c78a90c201a916d7697e6d6fcc73db 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.325 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01970 e8c78a90c201a916d7697e6d6fcc73db 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 3.0E-28 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01970 e8c78a90c201a916d7697e6d6fcc73db 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 3.2E-32 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01970 e8c78a90c201a916d7697e6d6fcc73db 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 2.1E-35 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 UP17_01970 e8c78a90c201a916d7697e6d6fcc73db 84 Gene3D G3DSA:3.30.1280.10 1 84 8.8E-37 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_01970 e8c78a90c201a916d7697e6d6fcc73db 84 SUPERFAMILY SSF82697 1 80 4.19E-29 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 SUPERFAMILY SSF52172 2 127 1.15E-40 T 11-10-2018 IPR011006 CheY-like superfamily UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 Gene3D G3DSA:3.40.50.2300 1 123 3.3E-37 T 11-10-2018 UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 3.5E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 SMART SM00862 153 229 5.2E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 Gene3D G3DSA:1.10.10.10 130 232 3.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 SUPERFAMILY SSF46894 130 230 5.95E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 SMART SM00448 3 114 2.0E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_21780 5a56930bcbca342701a484b8dbf2c5a7 232 Pfam PF00072 Response regulator receiver domain 5 115 2.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_15945 d6295dfb5b1607189f20ca113370c07a 171 Gene3D G3DSA:2.40.440.10 12 170 2.0E-40 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like UP17_15945 d6295dfb5b1607189f20ca113370c07a 171 Pfam PF03734 L,D-transpeptidase catalytic domain 30 153 2.4E-21 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UP17_15945 d6295dfb5b1607189f20ca113370c07a 171 SUPERFAMILY SSF141523 27 153 1.44E-31 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like UP17_10165 769761619ecbeb2c942ac2087e701e14 332 Gene3D G3DSA:3.60.130.10 32 317 8.0E-47 T 11-10-2018 UP17_10165 769761619ecbeb2c942ac2087e701e14 332 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 53 308 2.7E-30 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 UP17_10165 769761619ecbeb2c942ac2087e701e14 332 SUPERFAMILY SSF51197 29 309 5.04E-52 T 11-10-2018 UP17_19525 ced7f2e92bf57829cec67ea71bc3bab9 310 SUPERFAMILY SSF51569 7 296 1.15E-63 T 11-10-2018 UP17_19525 ced7f2e92bf57829cec67ea71bc3bab9 310 PIRSF PIRSF001365 5 305 2.4E-55 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_19525 ced7f2e92bf57829cec67ea71bc3bab9 310 Gene3D G3DSA:3.20.20.70 2 302 1.0E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_19525 ced7f2e92bf57829cec67ea71bc3bab9 310 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 4 297 2.6E-126 T 11-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 UP17_19525 ced7f2e92bf57829cec67ea71bc3bab9 310 SMART SM01130 7 298 3.7E-67 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_19525 ced7f2e92bf57829cec67ea71bc3bab9 310 Pfam PF00701 Dihydrodipicolinate synthetase family 8 296 7.7E-83 T 11-10-2018 IPR002220 DapA-like GO:0016829 UP17_06335 9f4482ea2136138c9b34825ce127e066 217 Gene3D G3DSA:3.40.50.620 2 217 4.0E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_06335 9f4482ea2136138c9b34825ce127e066 217 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 211 2.1E-41 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 UP17_06335 9f4482ea2136138c9b34825ce127e066 217 Pfam PF01467 Cytidylyltransferase-like 6 185 3.4E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_06335 9f4482ea2136138c9b34825ce127e066 217 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 212 20.759 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 UP17_06335 9f4482ea2136138c9b34825ce127e066 217 SUPERFAMILY SSF52374 1 214 2.52E-40 T 11-10-2018 UP17_18380 a153b75dfe0d6a8a2c4ae7feb5b74793 533 Gene3D G3DSA:3.20.20.140 61 489 4.8E-127 T 11-10-2018 UP17_18380 a153b75dfe0d6a8a2c4ae7feb5b74793 533 Pfam PF07969 Amidohydrolase family 49 530 4.4E-116 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_18380 a153b75dfe0d6a8a2c4ae7feb5b74793 533 Gene3D G3DSA:2.30.40.10 7 506 4.8E-127 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_18380 a153b75dfe0d6a8a2c4ae7feb5b74793 533 Gene3D G3DSA:3.10.310.70 79 197 4.8E-127 T 11-10-2018 UP17_18380 a153b75dfe0d6a8a2c4ae7feb5b74793 533 SUPERFAMILY SSF51338 3 531 4.32E-13 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_18380 a153b75dfe0d6a8a2c4ae7feb5b74793 533 SUPERFAMILY SSF51556 60 489 3.36E-36 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Gene3D G3DSA:3.30.1360.40 237 333 5.6E-218 T 11-10-2018 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Gene3D G3DSA:2.120.10.90 497 809 4.3E-126 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 761 806 2.1E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 9.1E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 705 1.9E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 545 3.6E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 656 2.6E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 709 756 3.4E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 SUPERFAMILY SSF56719 31 487 1.1E-181 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 1.4E-159 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Gene3D G3DSA:3.90.199.10 33 486 5.6E-218 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 811 25.009 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 SUPERFAMILY SSF101904 500 818 5.49E-111 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 807 0.0 T 11-10-2018 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 Gene3D G3DSA:1.10.268.10 370 459 5.6E-218 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 UP17_00035 4b0f84dda1fef09adfc0b3ab537e4fc7 848 SMART SM00434 12 465 9.9E-296 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 UP17_22805 61f0140f659cf6183f73a37306f9811d 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 UP17_22805 61f0140f659cf6183f73a37306f9811d 389 Pfam PF00155 Aminotransferase class I and II 32 379 5.5E-69 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_22805 61f0140f659cf6183f73a37306f9811d 389 Gene3D G3DSA:3.90.1150.10 31 379 3.3E-132 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_22805 61f0140f659cf6183f73a37306f9811d 389 SUPERFAMILY SSF53383 6 386 6.12E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_22805 61f0140f659cf6183f73a37306f9811d 389 Gene3D G3DSA:3.40.640.10 62 283 3.3E-132 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_25850 9b2cefdf5539abf6ec80162b8efdd7c4 236 SMART SM00448 2 116 1.1E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_25850 9b2cefdf5539abf6ec80162b8efdd7c4 236 SUPERFAMILY SSF52172 1 132 1.07E-23 T 11-10-2018 IPR011006 CheY-like superfamily UP17_25850 9b2cefdf5539abf6ec80162b8efdd7c4 236 Pfam PF04397 LytTr DNA-binding domain 142 232 6.4E-11 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_25850 9b2cefdf5539abf6ec80162b8efdd7c4 236 SMART SM00850 139 235 1.4E-8 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_25850 9b2cefdf5539abf6ec80162b8efdd7c4 236 Gene3D G3DSA:2.40.50.1020 131 225 2.9E-12 T 11-10-2018 UP17_25850 9b2cefdf5539abf6ec80162b8efdd7c4 236 Gene3D G3DSA:3.40.50.2300 1 130 4.4E-23 T 11-10-2018 UP17_25850 9b2cefdf5539abf6ec80162b8efdd7c4 236 Pfam PF00072 Response regulator receiver domain 4 116 2.9E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_04435 805b9c91e7495554c8c99c3b26889b2b 315 SUPERFAMILY SSF52172 2 135 5.55E-26 T 11-10-2018 IPR011006 CheY-like superfamily UP17_04435 805b9c91e7495554c8c99c3b26889b2b 315 Pfam PF08664 YcbB domain 161 299 4.4E-49 T 11-10-2018 IPR013972 YcbB domain UP17_04435 805b9c91e7495554c8c99c3b26889b2b 315 Gene3D G3DSA:3.40.50.2300 1 131 3.6E-24 T 11-10-2018 UP17_04435 805b9c91e7495554c8c99c3b26889b2b 315 Pfam PF00072 Response regulator receiver domain 4 114 1.5E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_04435 805b9c91e7495554c8c99c3b26889b2b 315 SMART SM00448 1 114 9.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01305 6fc3333eae25aa59a654e3db124b9932 298 Gene3D G3DSA:3.40.50.10330 7 125 1.9E-80 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 UP17_01305 6fc3333eae25aa59a654e3db124b9932 298 Gene3D G3DSA:2.60.200.40 126 281 1.9E-80 T 11-10-2018 UP17_01305 6fc3333eae25aa59a654e3db124b9932 298 SMART SM00046 5 132 1.6E-12 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 UP17_01305 6fc3333eae25aa59a654e3db124b9932 298 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 127 1.4E-31 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 UP17_01305 6fc3333eae25aa59a654e3db124b9932 298 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 296 3.0E-81 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase UP17_01305 6fc3333eae25aa59a654e3db124b9932 298 SUPERFAMILY SSF111331 2 297 3.01E-71 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 SUPERFAMILY SSF48168 26 207 1.96E-46 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 128 206 3.0E-19 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 549 572 3.9E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 284 303 3.9E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 483 506 3.9E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.9E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 521 543 3.9E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 431 442 3.9E-39 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 Pfam PF02867 Ribonucleotide reductase, barrel domain 209 726 2.5E-139 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 132 729 3.3E-169 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 SUPERFAMILY SSF51998 208 731 5.8E-163 T 11-10-2018 UP17_05060 93ac34c1e44e8932a06b25507b1ad181 743 Gene3D G3DSA:3.20.70.20 75 737 4.7E-198 T 11-10-2018 UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 PIRSF PIRSF037748 1 314 6.6E-114 T 11-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 313 33.558 T 11-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 Pfam PF11858 Domain of unknown function (DUF3378) 3 77 2.3E-25 T 11-10-2018 IPR024568 Ribonuclease HIII, N-terminal UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 6 305 2.0E-93 T 11-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 Gene3D G3DSA:3.30.420.10 98 317 9.4E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 Pfam PF01351 Ribonuclease HII 101 306 2.2E-45 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 Gene3D G3DSA:3.30.310.10 1 90 1.6E-26 T 11-10-2018 IPR012295 TBP domain superfamily UP17_17945 7030763ae4a6dfd8bf1e2a039f4acea9 319 SUPERFAMILY SSF53098 99 312 2.28E-45 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_06885 32338b4a28c009a97e833760ab257d1d 77 SUPERFAMILY SSF52833 2 75 5.97E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_06885 32338b4a28c009a97e833760ab257d1d 77 Pfam PF00462 Glutaredoxin 4 63 1.7E-13 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 UP17_06885 32338b4a28c009a97e833760ab257d1d 77 Gene3D G3DSA:3.40.30.10 1 77 1.7E-23 T 11-10-2018 UP17_00285 b079a045695f8b686367789f61d03886 98 SUPERFAMILY SSF160537 1 89 6.15E-34 T 11-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 UP17_00285 b079a045695f8b686367789f61d03886 98 Pfam PF04026 SpoVG 1 81 1.7E-36 T 11-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 UP17_00285 b079a045695f8b686367789f61d03886 98 Gene3D G3DSA:3.30.1120.40 1 97 4.2E-39 T 11-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 UP17_00285 b079a045695f8b686367789f61d03886 98 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 28.558 T 11-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 UP17_10435 56653415a38386c1e18a6fdb35af9e86 258 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 76 109 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_10435 56653415a38386c1e18a6fdb35af9e86 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_10435 56653415a38386c1e18a6fdb35af9e86 258 Gene3D G3DSA:3.40.1010.10 1 110 2.0E-35 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_10435 56653415a38386c1e18a6fdb35af9e86 258 Gene3D G3DSA:3.30.950.10 111 231 3.7E-48 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 UP17_10435 56653415a38386c1e18a6fdb35af9e86 258 SUPERFAMILY SSF53790 2 234 4.97E-68 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_10435 56653415a38386c1e18a6fdb35af9e86 258 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 253 1.3E-109 T 11-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 UP17_10435 56653415a38386c1e18a6fdb35af9e86 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 207 1.9E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_20075 7876971f858bdeafae54d618ac710917 144 Pfam PF14567 SMI1-KNR4 cell-wall 7 136 1.2E-31 T 11-10-2018 UP17_20075 7876971f858bdeafae54d618ac710917 144 SUPERFAMILY SSF160631 3 140 4.45E-37 T 11-10-2018 UP17_20075 7876971f858bdeafae54d618ac710917 144 Gene3D G3DSA:3.40.1580.10 1 144 2.1E-42 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily UP17_20075 7876971f858bdeafae54d618ac710917 144 SMART SM00860 22 135 1.1E-8 T 11-10-2018 IPR018958 Knr4/Smi1-like domain UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 1.9E-38 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 Gene3D G3DSA:2.60.15.10 1 88 2.2E-32 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 129 23.463 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 SUPERFAMILY SSF46604 87 132 2.41E-8 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 SUPERFAMILY SSF51344 2 84 1.96E-24 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 2.0E-30 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 6.9E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 Gene3D G3DSA:1.20.5.440 89 133 3.1E-13 T 11-10-2018 UP17_24140 6012f18c1fd94a2cbe4990020106aabb 133 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 131 1.1E-12 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain UP17_12160 d009e82e3bd1568f557febec2f19b903 177 Pfam PF16800 IseA DL-endopeptidase inhibitor 28 175 2.2E-51 T 11-10-2018 IPR031841 DL-endopeptidase inhibitor IseA UP17_12160 d009e82e3bd1568f557febec2f19b903 177 Gene3D G3DSA:3.10.450.420 24 177 1.0E-50 T 11-10-2018 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 Gene3D G3DSA:1.10.150.530 2 78 2.1E-20 T 11-10-2018 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 Gene3D G3DSA:3.20.20.70 82 345 1.8E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 18 360 72.462 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 Pfam PF13394 4Fe-4S single cluster domain 126 232 7.2E-7 T 11-10-2018 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 SUPERFAMILY SSF102114 101 328 3.14E-15 T 11-10-2018 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 PIRSF PIRSF006004 10 364 6.9E-135 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 Pfam PF04055 Radical SAM superfamily 121 295 4.1E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_07525 aab3c973034ed59f5da6c67d94dae807 364 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 16 364 5.1E-159 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 Gene3D G3DSA:3.30.479.20 56 146 6.9E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 Pfam PF00889 Elongation factor TS 70 274 1.8E-73 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 Gene3D G3DSA:1.10.8.10 1 55 1.0E-26 T 11-10-2018 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 79.314 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 Gene3D G3DSA:1.10.286.20 199 236 1.1E-19 T 11-10-2018 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 SUPERFAMILY SSF54713 55 144 4.97E-22 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 SUPERFAMILY SSF54713 151 293 1.03E-49 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 1.1E-114 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_07930 028aeef9a96e83abd37329c6e50f2a1d 294 SUPERFAMILY SSF46934 3 54 9.57E-20 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 UP17_14020 556e6b2cfbd4903920f4746bd1922da0 280 PIRSF PIRSF006493 1 280 8.5E-104 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type UP17_14020 556e6b2cfbd4903920f4746bd1922da0 280 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 173 1.5E-38 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 UP17_14020 556e6b2cfbd4903920f4746bd1922da0 280 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 255 32.871 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type UP17_14020 556e6b2cfbd4903920f4746bd1922da0 280 SUPERFAMILY SSF100939 2 260 4.51E-54 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily UP17_14020 556e6b2cfbd4903920f4746bd1922da0 280 Gene3D G3DSA:2.40.290.10 2 174 8.8E-20 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily UP17_14020 556e6b2cfbd4903920f4746bd1922da0 280 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 257 8.5E-94 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type UP17_14020 556e6b2cfbd4903920f4746bd1922da0 280 SMART SM00559 52 181 1.2E-45 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 116 8.1E-11 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 259 281 3.7E-5 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 367 389 3.7E-5 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 3.7E-5 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 799 0.0 T 11-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 436 455 3.6E-44 T 11-10-2018 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 3.6E-44 T 11-10-2018 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 3.6E-44 T 11-10-2018 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 3.6E-44 T 11-10-2018 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 3.6E-44 T 11-10-2018 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 3.6E-44 T 11-10-2018 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 3.6E-44 T 11-10-2018 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 Pfam PF13244 Domain of unknown function (DUF4040) 635 699 3.1E-20 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 UP17_22880 b0c6a3a2c1851f5b0043e54e352bfcf1 801 Pfam PF00361 Proton-conducting membrane transporter 129 420 1.2E-67 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_16250 8b69fc25fdd5720a69355b39af9bffc6 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 39 1.6E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site UP17_16250 8b69fc25fdd5720a69355b39af9bffc6 159 Pfam PF15980 Putative Competence protein ComGF 56 142 7.0E-20 T 11-10-2018 IPR016977 Competence operon G, ComGF UP17_02650 8aec408ffd31099f26fb668dc8640c29 388 SUPERFAMILY SSF64182 4 297 1.7E-27 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily UP17_02650 8aec408ffd31099f26fb668dc8640c29 388 Gene3D G3DSA:3.10.310.30 248 301 2.9E-10 T 11-10-2018 UP17_07875 0aee2911886260150aa95e86e9068c0a 382 Gene3D G3DSA:1.20.120.1380 126 364 1.3E-83 T 11-10-2018 UP17_07875 0aee2911886260150aa95e86e9068c0a 382 SMART SM00962 183 374 2.1E-53 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_07875 0aee2911886260150aa95e86e9068c0a 382 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 270 1.7E-68 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 UP17_07875 0aee2911886260150aa95e86e9068c0a 382 SUPERFAMILY SSF52540 183 369 3.94E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07875 0aee2911886260150aa95e86e9068c0a 382 Gene3D G3DSA:3.40.50.300 178 362 1.3E-83 T 11-10-2018 UP17_07875 0aee2911886260150aa95e86e9068c0a 382 Pfam PF00448 SRP54-type protein, GTPase domain 184 371 8.3E-43 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 UP17_03420 08ba8a08a9d2d7b716e51bb9ba5e374c 66 Pfam PF11755 Protein of unknown function (DUF3311) 6 64 2.6E-21 T 11-10-2018 IPR021741 Protein of unknown function DUF3311 UP17_24035 74d2a6c5e3eb8bdf46333261c7bf7e8c 282 SUPERFAMILY SSF117143 94 243 2.62E-8 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like UP17_24035 74d2a6c5e3eb8bdf46333261c7bf7e8c 282 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 147 5.6E-23 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G UP17_24035 74d2a6c5e3eb8bdf46333261c7bf7e8c 282 Pfam PF00460 Flagella basal body rod protein 6 34 6.7E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UP17_24035 74d2a6c5e3eb8bdf46333261c7bf7e8c 282 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 221 279 9.9E-18 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UP17_10110 be0af0b3acba2096159384ef0c414f00 193 Pfam PF11579 Protein of unknown function (DUF3238) 2 191 3.3E-107 T 11-10-2018 IPR021631 Protein of unknown function DUF3238 UP17_15180 2dfe3b47593bdc78ab8d4667cd6c3eda 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 47 250 2.4E-44 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 UP17_15180 2dfe3b47593bdc78ab8d4667cd6c3eda 262 SUPERFAMILY SSF56529 45 252 4.32E-50 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_15180 2dfe3b47593bdc78ab8d4667cd6c3eda 262 Gene3D G3DSA:3.90.850.10 43 257 7.1E-52 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_15180 2dfe3b47593bdc78ab8d4667cd6c3eda 262 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 45 250 1.6E-80 T 11-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 UP17_10600 e0c9c9bc561efdae8277570baac17ec5 374 Pfam PF01266 FAD dependent oxidoreductase 6 351 2.5E-71 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UP17_10600 e0c9c9bc561efdae8277570baac17ec5 374 Gene3D G3DSA:3.30.9.10 92 311 1.6E-111 T 11-10-2018 UP17_10600 e0c9c9bc561efdae8277570baac17ec5 374 SUPERFAMILY SSF54373 226 311 9.42E-16 T 11-10-2018 UP17_10600 e0c9c9bc561efdae8277570baac17ec5 374 Gene3D G3DSA:3.50.50.60 6 352 1.6E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_10600 e0c9c9bc561efdae8277570baac17ec5 374 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 8 355 4.9E-109 T 11-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 UP17_10600 e0c9c9bc561efdae8277570baac17ec5 374 SUPERFAMILY SSF51905 5 359 7.77E-51 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 Gene3D G3DSA:3.30.420.40 1 252 4.0E-113 T 11-10-2018 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 PIRSF PIRSF000538 2 495 2.0E-183 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 SUPERFAMILY SSF53067 254 493 2.46E-88 T 11-10-2018 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 60.023 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 1.0E-65 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 Gene3D G3DSA:3.30.420.40 253 496 4.2E-94 T 11-10-2018 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 SUPERFAMILY SSF53067 3 254 1.38E-97 T 11-10-2018 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 5.8E-90 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 493 5.5E-229 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 UP17_22435 e15db2fc4bc131d413d3490c4ff3bbf1 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 SUPERFAMILY SSF52540 8 142 1.33E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 PIRSF PIRSF035805 5 199 2.5E-62 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 Gene3D G3DSA:3.30.60.20 142 200 5.3E-26 T 11-10-2018 UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 37.501 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 Gene3D G3DSA:3.40.50.300 1 141 1.8E-56 T 11-10-2018 UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 Pfam PF00265 Thymidine kinase 8 187 1.0E-56 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 UP17_24255 15a871f8d2753e4a17a62b1a62db8898 201 SUPERFAMILY SSF57716 142 195 4.04E-16 T 11-10-2018 UP17_08695 22d627624205459ecd5a6c993b54b668 871 SUPERFAMILY SSF52009 763 869 7.33E-28 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 UP17_08695 22d627624205459ecd5a6c993b54b668 871 Gene3D G3DSA:3.50.30.10 768 871 9.3E-32 T 11-10-2018 UP17_08695 22d627624205459ecd5a6c993b54b668 871 Gene3D G3DSA:3.30.1490.20 1 184 1.3E-67 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_08695 22d627624205459ecd5a6c993b54b668 871 SUPERFAMILY SSF56059 2 342 3.53E-95 T 11-10-2018 UP17_08695 22d627624205459ecd5a6c993b54b668 871 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 316 1.1E-93 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 UP17_08695 22d627624205459ecd5a6c993b54b668 871 Gene3D G3DSA:3.30.470.20 185 314 6.5E-45 T 11-10-2018 UP17_08695 22d627624205459ecd5a6c993b54b668 871 Pfam PF00391 PEP-utilising enzyme, mobile domain 795 866 3.1E-22 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 UP17_01605 458b587f69ffab0a298263431c5e24bf 448 Pfam PF02447 GntP family permease 1 446 3.5E-178 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_01605 458b587f69ffab0a298263431c5e24bf 448 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 448 3.4E-199 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_01605 458b587f69ffab0a298263431c5e24bf 448 PIRSF PIRSF002746 1 448 8.6E-177 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 SMART SM00881 80 181 6.3E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 38.644 T 11-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 Pfam PF02629 CoA binding domain 83 179 1.8E-27 T 11-10-2018 IPR003781 CoA-binding GO:0048037 UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 Gene3D G3DSA:1.10.10.10 1 81 7.1E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 SUPERFAMILY SSF46785 8 79 5.9E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 SUPERFAMILY SSF51735 83 208 5.42E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 Gene3D G3DSA:3.40.50.720 82 216 9.2E-46 T 11-10-2018 UP17_01545 7af2b6d52ee55bb0ed0b0d7d3f4b1030 219 Pfam PF06971 Putative DNA-binding protein N-terminus 6 54 8.0E-20 T 11-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 UP17_16180 92a1aec52133ed6c1186d2bcb126e175 125 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 5 125 2.0E-6 T 11-10-2018 UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 SMART SM00382 383 569 1.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 ProSitePatterns PS00211 ABC transporters family signature. 495 509 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 Pfam PF00664 ABC transporter transmembrane region 69 288 1.2E-16 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 Pfam PF00005 ABC transporter 374 523 3.7E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 SUPERFAMILY SSF52540 347 594 1.43E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 Gene3D G3DSA:3.40.50.300 346 598 5.4E-85 T 11-10-2018 UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 SUPERFAMILY SSF90123 15 316 8.89E-33 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_17125 f64af32127aeda7e053ec7f3395b7489 599 Gene3D G3DSA:1.20.1560.10 4 332 4.9E-27 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_13290 b65d79a09ff4e2ac0193fe440a1e93a4 177 Gene3D G3DSA:3.40.630.30 4 171 5.7E-47 T 11-10-2018 UP17_13290 b65d79a09ff4e2ac0193fe440a1e93a4 177 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 3.6E-31 T 11-10-2018 IPR000182 GNAT domain UP17_13290 b65d79a09ff4e2ac0193fe440a1e93a4 177 SUPERFAMILY SSF55729 1 173 3.35E-48 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_23725 5a3153024da0763fc033a2cb52165827 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 120 1.2E-45 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 UP17_23725 5a3153024da0763fc033a2cb52165827 133 Gene3D G3DSA:1.20.120.340 1 122 4.5E-44 T 11-10-2018 UP17_23725 5a3153024da0763fc033a2cb52165827 133 SUPERFAMILY SSF101116 4 123 1.83E-41 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 UP17_23725 5a3153024da0763fc033a2cb52165827 133 PIRSF PIRSF039090 1 129 1.8E-39 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 UP17_23725 5a3153024da0763fc033a2cb52165827 133 Pfam PF02561 Flagellar protein FliS 7 118 2.0E-42 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 UP17_21645 5c93692ddf3a02687f1adf370b756295 104 SUPERFAMILY SSF52833 2 103 1.85E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_21645 5c93692ddf3a02687f1adf370b756295 104 Gene3D G3DSA:3.40.30.10 1 103 6.5E-22 T 11-10-2018 UP17_21645 5c93692ddf3a02687f1adf370b756295 104 Pfam PF00085 Thioredoxin 6 101 4.2E-15 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 Gene3D G3DSA:1.10.3860.10 2 414 9.0E-122 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 8.1E-36 T 11-10-2018 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 8.1E-36 T 11-10-2018 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 PRINTS PR00173 Glutamate-aspartate symporter signature 42 62 8.1E-36 T 11-10-2018 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 PRINTS PR00173 Glutamate-aspartate symporter signature 72 97 8.1E-36 T 11-10-2018 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 PRINTS PR00173 Glutamate-aspartate symporter signature 143 165 8.1E-36 T 11-10-2018 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 8.1E-36 T 11-10-2018 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 SUPERFAMILY SSF118215 7 400 4.71E-116 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 293 316 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site UP17_02520 31b9100884cfd2e9a5a7061bb31c8165 422 Pfam PF00375 Sodium:dicarboxylate symporter family 7 398 5.2E-108 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 UP17_19430 efe6835b6a4a6af0a75d6edde2b011e9 283 SMART SM00849 21 220 2.9E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_19430 efe6835b6a4a6af0a75d6edde2b011e9 283 Pfam PF00753 Metallo-beta-lactamase superfamily 28 220 1.2E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_19430 efe6835b6a4a6af0a75d6edde2b011e9 283 Gene3D G3DSA:3.60.15.10 2 245 6.7E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_19430 efe6835b6a4a6af0a75d6edde2b011e9 283 SUPERFAMILY SSF56281 27 225 1.57E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_00755 13f92debd7fd73ab7cd5871f833292f6 61 Gene3D G3DSA:4.10.830.10 1 61 7.9E-30 T 11-10-2018 UP17_00755 13f92debd7fd73ab7cd5871f833292f6 61 SUPERFAMILY SSF57716 3 61 8.55E-22 T 11-10-2018 UP17_00755 13f92debd7fd73ab7cd5871f833292f6 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00755 13f92debd7fd73ab7cd5871f833292f6 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 7.1E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00755 13f92debd7fd73ab7cd5871f833292f6 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.822 T 11-10-2018 IPR023053 Ribosomal protein S14, type Z UP17_06115 47b0423918b21ba43fe7867e41500091 156 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 30 147 3.2E-37 T 11-10-2018 IPR005562 SpoVA UP17_06115 47b0423918b21ba43fe7867e41500091 156 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 13 150 1.6E-59 T 11-10-2018 IPR014203 Sporulation stage V, protein AC UP17_16405 83403dfe3f93890a3d5814bab7a0cc13 126 Pfam PF03960 ArsC family 20 113 8.7E-17 T 11-10-2018 IPR006660 Arsenate reductase-like UP17_16405 83403dfe3f93890a3d5814bab7a0cc13 126 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 115 2.2E-34 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR UP17_16405 83403dfe3f93890a3d5814bab7a0cc13 126 SUPERFAMILY SSF52833 4 116 6.72E-31 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_16405 83403dfe3f93890a3d5814bab7a0cc13 126 Gene3D G3DSA:3.40.30.10 4 120 5.4E-36 T 11-10-2018 UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 Gene3D G3DSA:1.10.10.10 1 55 3.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.9E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.9E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 SMART SM01134 73 231 1.2E-65 T 11-10-2018 UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 SUPERFAMILY SSF46785 4 63 1.11E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 SUPERFAMILY SSF100950 76 223 6.38E-34 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 Pfam PF00455 DeoR C terminal sensor domain 76 229 3.9E-47 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.8E-17 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_13980 4c18a9e94d2cbfc44feef53cee5804a9 250 SMART SM00420 6 58 1.5E-17 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 SUPERFAMILY SSF48008 102 229 1.1E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 1.0E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 SUPERFAMILY SSF46785 13 83 1.4E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 SMART SM00895 103 221 7.4E-17 T 11-10-2018 IPR011711 GntR, C-terminal UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 Gene3D G3DSA:1.20.120.530 99 230 4.6E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 SMART SM00345 22 81 8.4E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 Gene3D G3DSA:1.10.10.10 7 81 1.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 Pfam PF07729 FCD domain 104 220 5.6E-20 T 11-10-2018 IPR011711 GntR, C-terminal UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 5.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_19540 fbe64a6422aaf433217eaaba65c9ba11 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 5.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_25485 89c45e60a8a5d8bc863a2a1abda5a006 103 SUPERFAMILY SSF46785 8 100 7.44E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_25485 89c45e60a8a5d8bc863a2a1abda5a006 103 Gene3D G3DSA:1.10.10.10 1 103 2.1E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_25485 89c45e60a8a5d8bc863a2a1abda5a006 103 Pfam PF01638 HxlR-like helix-turn-helix 14 102 4.7E-40 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type UP17_13960 6417017efc01a2eaeb7d9f40b25e293f 134 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 95 113 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 UP17_13960 6417017efc01a2eaeb7d9f40b25e293f 134 PIRSF PIRSF004681 1 133 7.5E-38 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 UP17_13960 6417017efc01a2eaeb7d9f40b25e293f 134 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 130 4.3E-52 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 UP17_13960 6417017efc01a2eaeb7d9f40b25e293f 134 SUPERFAMILY SSF111038 3 130 2.49E-45 T 11-10-2018 IPR035917 YjbQ-like superfamily UP17_13960 6417017efc01a2eaeb7d9f40b25e293f 134 Pfam PF01894 Uncharacterised protein family UPF0047 17 129 4.6E-39 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 UP17_13960 6417017efc01a2eaeb7d9f40b25e293f 134 Gene3D G3DSA:2.60.120.460 1 133 9.0E-52 T 11-10-2018 IPR035917 YjbQ-like superfamily UP17_08295 266becd2415d083a2282be2f07bd7890 447 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 4.7E-73 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 1.6E-52 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.6E-52 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.6E-52 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.6E-52 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.6E-52 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 1.6E-52 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.6E-52 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 UP17_08295 266becd2415d083a2282be2f07bd7890 447 Gene3D G3DSA:3.90.110.10 171 444 1.0E-96 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UP17_08295 266becd2415d083a2282be2f07bd7890 447 SUPERFAMILY SSF51735 4 168 5.04E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_08295 266becd2415d083a2282be2f07bd7890 447 SUPERFAMILY SSF56327 173 437 3.02E-89 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UP17_08295 266becd2415d083a2282be2f07bd7890 447 Gene3D G3DSA:3.40.50.720 1 170 2.8E-73 T 11-10-2018 UP17_08295 266becd2415d083a2282be2f07bd7890 447 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 2.5E-47 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 UP17_08295 266becd2415d083a2282be2f07bd7890 447 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 11-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 UP17_23930 adf921ffd56b8731103b999e405e073c 669 Pfam PF03717 Penicillin-binding Protein dimerisation domain 158 320 2.1E-36 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 UP17_23930 adf921ffd56b8731103b999e405e073c 669 Gene3D G3DSA:3.30.1390.30 178 250 8.9E-52 T 11-10-2018 UP17_23930 adf921ffd56b8731103b999e405e073c 669 Gene3D G3DSA:3.10.450.100 26 145 5.5E-20 T 11-10-2018 UP17_23930 adf921ffd56b8731103b999e405e073c 669 Pfam PF00905 Penicillin binding protein transpeptidase domain 356 654 2.9E-70 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_23930 adf921ffd56b8731103b999e405e073c 669 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 27 149 1.6E-27 T 11-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 UP17_23930 adf921ffd56b8731103b999e405e073c 669 SUPERFAMILY SSF56601 339 669 1.64E-75 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_23930 adf921ffd56b8731103b999e405e073c 669 Gene3D G3DSA:3.40.710.10 338 669 3.7E-85 T 11-10-2018 UP17_23930 adf921ffd56b8731103b999e405e073c 669 SUPERFAMILY SSF56519 152 338 3.92E-40 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 UP17_23930 adf921ffd56b8731103b999e405e073c 669 Gene3D G3DSA:3.90.1310.10 158 333 8.9E-52 T 11-10-2018 UP17_23930 adf921ffd56b8731103b999e405e073c 669 SUPERFAMILY SSF54427 29 147 3.26E-30 T 11-10-2018 IPR032710 NTF2-like domain superfamily UP17_06060 ef592e25f64f74f8e49463f4de650505 304 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06060 ef592e25f64f74f8e49463f4de650505 304 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 24 297 1.3E-68 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06060 ef592e25f64f74f8e49463f4de650505 304 SUPERFAMILY SSF55120 76 297 1.76E-66 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06060 ef592e25f64f74f8e49463f4de650505 304 Gene3D G3DSA:3.30.2350.10 85 300 4.4E-63 T 11-10-2018 UP17_06060 ef592e25f64f74f8e49463f4de650505 304 Pfam PF00849 RNA pseudouridylate synthase 93 243 4.2E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_17330 4a326643f01b00a8ff63cd6ecdd9b19a 253 Gene3D G3DSA:3.40.50.720 1 253 1.5E-82 T 11-10-2018 UP17_17330 4a326643f01b00a8ff63cd6ecdd9b19a 253 Pfam PF00899 ThiF family 6 158 2.4E-38 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 UP17_17330 4a326643f01b00a8ff63cd6ecdd9b19a 253 SUPERFAMILY SSF69572 4 245 2.62E-64 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 Pfam PF02910 Fumarate reductase flavoprotein C-term 415 507 9.9E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 Pfam PF00890 FAD binding domain 6 372 1.4E-78 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 4 493 4.0E-161 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 Gene3D G3DSA:1.20.58.100 408 509 2.3E-17 T 11-10-2018 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 SUPERFAMILY SSF46977 414 507 1.07E-20 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 SUPERFAMILY SSF51905 3 388 4.33E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 SUPERFAMILY SSF56425 222 332 1.79E-27 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 335 357 2.5E-9 T 11-10-2018 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.5E-9 T 11-10-2018 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 Gene3D G3DSA:3.90.700.10 232 338 6.1E-132 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_17480 46e1dcf28fc0dfb4a2b40c7d32a3e53b 527 Gene3D G3DSA:3.50.50.60 6 384 6.1E-132 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 Gene3D G3DSA:2.40.50.140 1 66 6.7E-31 T 11-10-2018 UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 SUPERFAMILY SSF50249 1 64 1.1E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 PIRSF PIRSF002599 1 66 3.7E-26 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 PRINTS PR00050 Cold shock protein signature 24 33 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 PRINTS PR00050 Cold shock protein signature 39 57 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 PRINTS PR00050 Cold shock protein signature 4 19 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 8.2E-32 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_13165 8fa187ad6ba0d42503c2d847f1a5e74b 66 SMART SM00357 3 66 6.9E-33 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_15195 675e87233f758c4ce63856db05b7666c 490 Gene3D G3DSA:1.20.140.10 278 489 1.7E-85 T 11-10-2018 UP17_15195 675e87233f758c4ce63856db05b7666c 490 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 274 1.2E-96 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal UP17_15195 675e87233f758c4ce63856db05b7666c 490 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 3 482 2.1E-210 T 11-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 UP17_15195 675e87233f758c4ce63856db05b7666c 490 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 282 480 1.7E-71 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal UP17_15195 675e87233f758c4ce63856db05b7666c 490 Gene3D G3DSA:1.10.3140.10 3 146 7.6E-51 T 11-10-2018 UP17_15195 675e87233f758c4ce63856db05b7666c 490 SUPERFAMILY SSF47203 266 481 1.53E-64 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_15195 675e87233f758c4ce63856db05b7666c 490 PIRSF PIRSF000331 1 490 5.5E-172 T 11-10-2018 IPR004925 HpaB/PvcC/4-BUDH UP17_15195 675e87233f758c4ce63856db05b7666c 490 SUPERFAMILY SSF56645 4 276 9.16E-79 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_15195 675e87233f758c4ce63856db05b7666c 490 Gene3D G3DSA:2.40.110.10 147 277 1.5E-43 T 11-10-2018 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 126 264 1.7E-64 T 11-10-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 Gene3D G3DSA:3.30.360.10 126 270 1.2E-125 T 11-10-2018 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 114 5.9E-10 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 SUPERFAMILY SSF51735 2 150 1.15E-24 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 SUPERFAMILY SSF55347 126 264 5.89E-59 T 11-10-2018 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 293 118.223 T 11-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 288 6.1E-137 T 11-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 SMART SM00859 5 118 7.7E-5 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 Gene3D G3DSA:3.40.50.720 7 282 1.2E-125 T 11-10-2018 UP17_10520 c3cad6c5a6cbe26cc3f8a79ba12bcb0f 293 PIRSF PIRSF015689 1 292 1.2E-131 T 11-10-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 UP17_24505 b843ea50ef4e08a8d94a46504b2f0e33 363 Pfam PF07995 Glucose / Sorbosone dehydrogenase 51 341 1.3E-65 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase UP17_24505 b843ea50ef4e08a8d94a46504b2f0e33 363 SUPERFAMILY SSF50952 42 341 9.68E-40 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 UP17_24505 b843ea50ef4e08a8d94a46504b2f0e33 363 Gene3D G3DSA:2.120.10.30 21 357 3.8E-100 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like UP17_22405 b9c684c977ac61b5f4eb9ecdfbc40b2f 156 SUPERFAMILY SSF51182 3 153 9.47E-22 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_22405 b9c684c977ac61b5f4eb9ecdfbc40b2f 156 Pfam PF05995 Cysteine dioxygenase type I 35 153 4.7E-11 T 11-10-2018 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|Reactome: R-HSA-1614558 UP17_22405 b9c684c977ac61b5f4eb9ecdfbc40b2f 156 Gene3D G3DSA:2.60.120.10 1 156 2.8E-40 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_09800 5c560dc3bf7f111b2d5fa7d92310acba 331 SUPERFAMILY SSF52518 10 330 1.38E-99 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_09800 5c560dc3bf7f111b2d5fa7d92310acba 331 Pfam PF00676 Dehydrogenase E1 component 20 318 1.0E-102 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 UP17_09800 5c560dc3bf7f111b2d5fa7d92310acba 331 Gene3D G3DSA:3.40.50.970 1 331 3.6E-116 T 11-10-2018 UP17_05905 e0b1bf3b7e8755962cdf2f6496b6f5a2 315 Gene3D G3DSA:3.90.850.10 99 313 4.0E-85 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_05905 e0b1bf3b7e8755962cdf2f6496b6f5a2 315 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 104 309 3.1E-71 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 UP17_05905 e0b1bf3b7e8755962cdf2f6496b6f5a2 315 SUPERFAMILY SSF56529 92 309 1.96E-81 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 SMART SM00387 468 577 5.6E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 575 4.0E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 Pfam PF07694 5TMR of 5TMR-LYT 26 204 4.4E-56 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 SUPERFAMILY SSF55874 431 574 1.7E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 Gene3D G3DSA:3.30.565.10 429 579 8.2E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 Pfam PF06580 Histidine kinase 374 453 1.3E-26 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 SUPERFAMILY SSF55781 241 364 1.86E-6 T 11-10-2018 UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 7.9E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 574 7.9E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20190 f7a8bed71a19de90e463c3f3b25b9d7b 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 7.9E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 1.0E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Gene3D G3DSA:3.30.54.20 626 679 4.5E-52 T 11-10-2018 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Gene3D G3DSA:3.30.980.10 564 699 4.5E-52 T 11-10-2018 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Gene3D G3DSA:3.30.930.10 4 242 2.6E-94 T 11-10-2018 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Pfam PF01411 tRNA synthetases class II (A) 8 556 9.2E-214 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 184.671 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 SUPERFAMILY SSF55186 554 710 3.14E-52 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Gene3D G3DSA:3.10.310.40 765 875 4.4E-37 T 11-10-2018 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 SUPERFAMILY SSF50447 455 554 1.02E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_17015 8445c04ae15353b7de0919ad434f684a 878 SUPERFAMILY SSF101353 246 438 2.22E-70 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 SUPERFAMILY SSF55681 5 245 2.98E-88 T 11-10-2018 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 SMART SM00863 655 698 1.1E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Gene3D G3DSA:2.40.30.130 462 554 4.0E-11 T 11-10-2018 UP17_17015 8445c04ae15353b7de0919ad434f684a 878 Pfam PF02272 DHHA1 domain 737 874 2.5E-31 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 UP17_06215 c7546556d68a3fcaf79ba79304255676 252 Gene3D G3DSA:1.10.3720.10 48 246 2.0E-31 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06215 c7546556d68a3fcaf79ba79304255676 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 241 1.9E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_06215 c7546556d68a3fcaf79ba79304255676 252 SUPERFAMILY SSF161098 49 232 9.29E-33 T 11-10-2018 IPR035906 MetI-like superfamily UP17_13920 f0dc9ba98228b025c96c79e6410ead74 510 SMART SM00244 119 301 1.5E-9 T 11-10-2018 IPR001107 Band 7 domain UP17_13920 f0dc9ba98228b025c96c79e6410ead74 510 SUPERFAMILY SSF117892 68 210 2.09E-34 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily UP17_13920 f0dc9ba98228b025c96c79e6410ead74 510 Gene3D G3DSA:3.30.479.30 77 193 1.2E-37 T 11-10-2018 UP17_13920 f0dc9ba98228b025c96c79e6410ead74 510 Pfam PF15975 Flotillin 368 456 2.2E-13 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 UP17_13920 f0dc9ba98228b025c96c79e6410ead74 510 Pfam PF01145 SPFH domain / Band 7 family 30 220 4.2E-24 T 11-10-2018 IPR001107 Band 7 domain UP17_03570 f76dc74c0bfcf5f76f488894d0d1ec6a 117 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 8 117 3.7E-20 T 11-10-2018 IPR006542 Protein of unknown function DUF1093 UP17_03570 f76dc74c0bfcf5f76f488894d0d1ec6a 117 SUPERFAMILY SSF159121 28 117 4.05E-25 T 11-10-2018 IPR036166 YxeA-like superfamily UP17_03570 f76dc74c0bfcf5f76f488894d0d1ec6a 117 Pfam PF06486 Protein of unknown function (DUF1093) 29 107 3.0E-21 T 11-10-2018 IPR006542 Protein of unknown function DUF1093 UP17_03570 f76dc74c0bfcf5f76f488894d0d1ec6a 117 Gene3D G3DSA:2.40.50.480 25 117 2.7E-28 T 11-10-2018 IPR036166 YxeA-like superfamily UP17_02600 9afc17494f421b0817a320aadee1ef92 682 SMART SM00926 9 64 6.3E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Gene3D G3DSA:2.20.25.90 6 69 7.0E-16 T 11-10-2018 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Pfam PF00384 Molybdopterin oxidoreductase 67 472 4.6E-61 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Gene3D G3DSA:3.30.2070.10 433 521 6.2E-150 T 11-10-2018 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Gene3D G3DSA:3.40.50.740 78 478 6.2E-150 T 11-10-2018 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 12 63 1.2E-14 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Pfam PF01568 Molydopterin dinucleotide binding domain 565 665 1.9E-15 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 418 435 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 SUPERFAMILY SSF50692 527 679 2.49E-26 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Gene3D G3DSA:3.40.228.10 145 543 6.2E-150 T 11-10-2018 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 SUPERFAMILY SSF53706 12 557 5.89E-163 T 11-10-2018 UP17_02600 9afc17494f421b0817a320aadee1ef92 682 Gene3D G3DSA:2.40.40.20 545 682 1.2E-23 T 11-10-2018 UP17_14835 7e0956b5d857a8ca0bf07ea2785c3a99 112 SUPERFAMILY SSF54593 1 112 9.93E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_14835 7e0956b5d857a8ca0bf07ea2785c3a99 112 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 110 5.6E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_14835 7e0956b5d857a8ca0bf07ea2785c3a99 112 Gene3D G3DSA:3.10.180.10 2 112 1.6E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_21885 d1df337e63f82e0d37dfa7a31a9e7dad 468 Gene3D G3DSA:3.30.420.40 104 140 2.3E-5 T 11-10-2018 UP17_21885 d1df337e63f82e0d37dfa7a31a9e7dad 468 Gene3D G3DSA:3.30.1490.110 89 103 2.3E-5 T 11-10-2018 UP17_21885 d1df337e63f82e0d37dfa7a31a9e7dad 468 PIRSF PIRSF012293 4 468 8.7E-135 T 11-10-2018 IPR009377 Ethanolamine utilisation EutA UP17_21885 d1df337e63f82e0d37dfa7a31a9e7dad 468 Pfam PF06277 Ethanolamine utilisation protein EutA 6 467 3.2E-154 T 11-10-2018 IPR009377 Ethanolamine utilisation EutA UP17_21885 d1df337e63f82e0d37dfa7a31a9e7dad 468 Gene3D G3DSA:3.30.420.40 141 178 2.3E-5 T 11-10-2018 UP17_21885 d1df337e63f82e0d37dfa7a31a9e7dad 468 SUPERFAMILY SSF53067 11 265 1.92E-9 T 11-10-2018 UP17_19520 1633ebcd2fb61d00a2c9ea65e985a99b 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_19520 1633ebcd2fb61d00a2c9ea65e985a99b 487 SUPERFAMILY SSF53720 4 486 1.14E-159 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_19520 1633ebcd2fb61d00a2c9ea65e985a99b 487 Pfam PF00171 Aldehyde dehydrogenase family 18 484 4.2E-167 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_19520 1633ebcd2fb61d00a2c9ea65e985a99b 487 Gene3D G3DSA:3.40.309.10 259 453 1.2E-164 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_19520 1633ebcd2fb61d00a2c9ea65e985a99b 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_19520 1633ebcd2fb61d00a2c9ea65e985a99b 487 Gene3D G3DSA:3.40.605.10 14 482 1.2E-164 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_17655 41697fc6f91d8671a395258f39139172 258 SUPERFAMILY SSF69618 10 255 8.89E-64 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17655 41697fc6f91d8671a395258f39139172 258 Gene3D G3DSA:3.40.50.10090 127 257 3.1E-22 T 11-10-2018 UP17_17655 41697fc6f91d8671a395258f39139172 258 Pfam PF02602 Uroporphyrinogen-III synthase HemD 24 248 8.1E-58 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 UP17_17655 41697fc6f91d8671a395258f39139172 258 Gene3D G3DSA:3.40.50.10090 10 126 1.3E-24 T 11-10-2018 UP17_11000 ec271460642fa7057a14a28333b34ee9 100 SUPERFAMILY SSF46689 8 90 1.29E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_17965 850fc57b4040551ba9d7904c9759594f 69 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 2.7E-33 T 11-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 UP17_17965 850fc57b4040551ba9d7904c9759594f 69 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 21.948 T 11-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 UP17_17965 850fc57b4040551ba9d7904c9759594f 69 Pfam PF14098 Small, acid-soluble spore protein I 3 67 5.1E-31 T 11-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 Gene3D G3DSA:1.20.1250.20 262 493 2.2E-24 T 11-10-2018 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 1.5E-7 T 11-10-2018 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 304 328 1.5E-7 T 11-10-2018 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 1.5E-7 T 11-10-2018 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 1.5E-7 T 11-10-2018 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 Gene3D G3DSA:1.20.1720.10 16 243 2.7E-40 T 11-10-2018 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 Pfam PF07690 Major Facilitator Superfamily 21 412 1.2E-51 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 444 5.0E-122 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_08905 306c3394a7cdd108ea263f0b1c07097a 496 SUPERFAMILY SSF103473 12 481 4.45E-67 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_17200 421ec6466e4f9557d9035c2659ae0c8d 369 Gene3D G3DSA:3.40.50.2000 3 172 5.8E-7 T 11-10-2018 UP17_17200 421ec6466e4f9557d9035c2659ae0c8d 369 Gene3D G3DSA:3.40.50.2000 173 349 1.7E-41 T 11-10-2018 UP17_17200 421ec6466e4f9557d9035c2659ae0c8d 369 Pfam PF00534 Glycosyl transferases group 1 176 346 1.3E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_17200 421ec6466e4f9557d9035c2659ae0c8d 369 SUPERFAMILY SSF53756 9 366 4.93E-52 T 11-10-2018 UP17_19135 b1d19ce289caa20dfa08fe919c51f09c 228 SUPERFAMILY SSF52218 21 225 7.47E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_19135 b1d19ce289caa20dfa08fe919c51f09c 228 Gene3D G3DSA:3.40.50.360 21 228 6.6E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_19135 b1d19ce289caa20dfa08fe919c51f09c 228 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 22 225 23.169 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 UP17_19135 b1d19ce289caa20dfa08fe919c51f09c 228 Pfam PF02525 Flavodoxin-like fold 22 223 4.9E-32 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 SUPERFAMILY SSF48498 69 181 4.05E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 3.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 3.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 45 4.5E-18 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 Gene3D G3DSA:1.10.10.60 1 41 1.5E-18 T 11-10-2018 UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 Pfam PF08359 YsiA-like protein, C-terminal region 55 151 3.1E-4 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 Gene3D G3DSA:1.10.357.10 42 182 1.8E-31 T 11-10-2018 UP17_11085 498c23d4596629e0772f623d3f75dcf6 203 SUPERFAMILY SSF46689 1 62 2.87E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_12525 29ebc7140e185ddcafe54917896db3d9 762 TIGRFAM TIGR03296 M6dom_TIGR03296: M6 family metalloprotease domain 135 442 3.6E-80 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 UP17_12525 29ebc7140e185ddcafe54917896db3d9 762 Pfam PF05547 Immune inhibitor A peptidase M6 95 757 8.1E-239 T 11-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 UP17_12525 29ebc7140e185ddcafe54917896db3d9 762 SUPERFAMILY SSF55486 206 377 1.11E-17 T 11-10-2018 UP17_12525 29ebc7140e185ddcafe54917896db3d9 762 PIRSF PIRSF007519 1 762 6.4E-265 T 11-10-2018 IPR012300 Peptidase M6, InhA UP17_21335 feee8ea02b5df676fcf5eaadc80afbf8 411 Gene3D G3DSA:3.50.50.60 1 389 3.3E-67 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_21335 feee8ea02b5df676fcf5eaadc80afbf8 411 Pfam PF01494 FAD binding domain 5 331 1.7E-19 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 UP17_21335 feee8ea02b5df676fcf5eaadc80afbf8 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.6E-7 T 11-10-2018 UP17_21335 feee8ea02b5df676fcf5eaadc80afbf8 411 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 8.6E-7 T 11-10-2018 UP17_21335 feee8ea02b5df676fcf5eaadc80afbf8 411 SUPERFAMILY SSF51905 5 349 9.66E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_23760 19727dd8b32d9f0c15f5d11ca624c1c1 292 SUPERFAMILY SSF64518 1 292 1.96E-67 T 11-10-2018 UP17_23760 19727dd8b32d9f0c15f5d11ca624c1c1 292 Pfam PF00700 Bacterial flagellin C-terminal helical region 211 291 1.3E-8 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UP17_23760 19727dd8b32d9f0c15f5d11ca624c1c1 292 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 8.2E-19 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 UP17_23760 19727dd8b32d9f0c15f5d11ca624c1c1 292 Gene3D G3DSA:1.20.1330.10 40 237 1.4E-48 T 11-10-2018 UP17_23760 19727dd8b32d9f0c15f5d11ca624c1c1 292 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 184 1.1E-53 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 142 8.0E-50 T 11-10-2018 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 142 8.2E-64 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 Pfam PF01220 Dehydroquinase class II 3 140 1.3E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 PIRSF PIRSF001399 1 146 1.4E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 SUPERFAMILY SSF52304 3 145 1.7E-60 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 Gene3D G3DSA:3.40.50.9100 1 147 8.2E-67 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 UP17_16165 8ebbdb004b5c85ffb15677d7af19f8e1 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 67.832 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 UP17_25530 8c447fbf5d2ad863fb7179722f649489 554 Pfam PF00030 Beta/Gamma crystallin 471 549 6.4E-8 T 11-10-2018 IPR001064 Beta/gamma crystallin UP17_25530 8c447fbf5d2ad863fb7179722f649489 554 Gene3D G3DSA:2.60.40.150 316 448 1.5E-5 T 11-10-2018 IPR035892 C2 domain superfamily UP17_25530 8c447fbf5d2ad863fb7179722f649489 554 SMART SM00247 470 550 1.0E-4 T 11-10-2018 IPR001064 Beta/gamma crystallin UP17_25530 8c447fbf5d2ad863fb7179722f649489 554 SUPERFAMILY SSF49695 467 551 1.55E-12 T 11-10-2018 IPR011024 Gamma-crystallin-like UP17_25530 8c447fbf5d2ad863fb7179722f649489 554 SUPERFAMILY SSF49562 323 440 8.91E-6 T 11-10-2018 UP17_25530 8c447fbf5d2ad863fb7179722f649489 554 Gene3D G3DSA:2.60.20.10 466 553 7.2E-18 T 11-10-2018 UP17_25470 ff9dc842531d6b045cf1b1194158c89b 256 SUPERFAMILY SSF51197 27 230 2.47E-9 T 11-10-2018 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.1E-21 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 355 412 5.0E-4 T 11-10-2018 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 SUPERFAMILY SSF55021 348 421 2.55E-12 T 11-10-2018 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 Gene3D G3DSA:3.40.50.720 4 337 1.3E-146 T 11-10-2018 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 Gene3D G3DSA:3.30.360.10 136 343 1.3E-146 T 11-10-2018 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 SUPERFAMILY SSF55347 137 302 1.9E-52 T 11-10-2018 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 Gene3D G3DSA:3.30.70.260 344 417 1.3E-146 T 11-10-2018 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 PIRSF PIRSF000098 1 429 1.8E-167 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 SUPERFAMILY SSF51735 1 158 5.99E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 Pfam PF01842 ACT domain 351 413 3.9E-9 T 11-10-2018 IPR002912 ACT domain UP17_23035 92964e2a7933c02de97d53ef04c41e8e 432 Pfam PF00742 Homoserine dehydrogenase 137 315 7.2E-65 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 UP17_08000 d50041281691a6f00b628e8c18e64894 93 Pfam PF04456 Protein of unknown function (DUF503) 3 88 2.7E-30 T 11-10-2018 IPR007546 Protein of unknown function DUF503 UP17_08000 d50041281691a6f00b628e8c18e64894 93 Gene3D G3DSA:3.30.70.1120 1 92 1.0E-22 T 11-10-2018 IPR036746 TT1725-like superfamily UP17_08000 d50041281691a6f00b628e8c18e64894 93 SUPERFAMILY SSF103007 1 93 2.88E-30 T 11-10-2018 IPR036746 TT1725-like superfamily UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 Gene3D G3DSA:3.60.20.40 396 574 2.4E-69 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 Gene3D G3DSA:1.10.246.130 268 395 5.1E-43 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 475 492 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 451 466 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 268 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 154 173 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 282 301 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 420 438 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 61 86 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 136 154 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 396 414 1.1E-66 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 40 567 4.2E-172 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 Pfam PF01019 Gamma-glutamyltranspeptidase 54 570 1.1E-170 T 11-10-2018 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 396 420 - T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 UP17_10050 c4092a52eca5fc9e135637f55ca6bfb3 691 SUPERFAMILY SSF56235 36 574 4.63E-174 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_11105 7eaf14738d880daa2ba0dbdfcc359179 70 SUPERFAMILY SSF51230 4 70 1.28E-20 T 11-10-2018 IPR011053 Single hybrid motif UP17_11105 7eaf14738d880daa2ba0dbdfcc359179 70 Pfam PF00364 Biotin-requiring enzyme 5 69 8.6E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_11105 7eaf14738d880daa2ba0dbdfcc359179 70 Gene3D G3DSA:2.40.50.100 4 70 6.9E-24 T 11-10-2018 UP17_25540 280831744e007623faaba9b0d2f12269 273 Pfam PF00005 ABC transporter 29 179 7.6E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_25540 280831744e007623faaba9b0d2f12269 273 SMART SM00382 38 230 8.4E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_25540 280831744e007623faaba9b0d2f12269 273 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_25540 280831744e007623faaba9b0d2f12269 273 SUPERFAMILY SSF52540 16 251 3.59E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_25540 280831744e007623faaba9b0d2f12269 273 Gene3D G3DSA:3.40.50.300 1 272 8.4E-67 T 11-10-2018 UP17_25540 280831744e007623faaba9b0d2f12269 273 TIGRFAM TIGR02769 nickel_nikE: nickel import ATP-binding protein NikE 2 266 3.6E-109 T 11-10-2018 IPR014137 Nickel import ATP-binding protein NikE GO:0005886|GO:0015413|GO:0015675|GO:0016151 UP17_00350 baf75ec1c546f39c2b0c8f2a03466a65 210 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 11 87 4.9E-21 T 11-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like UP17_00350 baf75ec1c546f39c2b0c8f2a03466a65 210 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 129 2.3E-42 T 11-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ UP17_09540 54dacc41075e643efc62ddcd22d4f4ab 101 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 2.1E-39 T 11-10-2018 IPR014910 Putative monooxygenase YdhR UP17_09540 54dacc41075e643efc62ddcd22d4f4ab 101 Gene3D G3DSA:3.30.70.100 1 101 1.5E-39 T 11-10-2018 UP17_09540 54dacc41075e643efc62ddcd22d4f4ab 101 SUPERFAMILY SSF54909 3 97 1.93E-28 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_22015 52fb34bd803aa3304cb3ce0111d2de0f 190 SUPERFAMILY SSF53335 11 148 5.73E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_22015 52fb34bd803aa3304cb3ce0111d2de0f 190 Pfam PF06962 Putative rRNA methylase 48 188 3.6E-51 T 11-10-2018 IPR010719 Putative rRNA methylase UP17_22015 52fb34bd803aa3304cb3ce0111d2de0f 190 Gene3D G3DSA:3.40.50.150 1 190 6.4E-68 T 11-10-2018 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 SUPERFAMILY SSF55681 153 492 3.45E-123 T 11-10-2018 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 Gene3D G3DSA:3.30.930.10 147 491 1.7E-137 T 11-10-2018 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 SUPERFAMILY SSF50249 5 146 1.71E-44 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 PIRSF PIRSF039101 2 494 2.7E-199 T 11-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 Pfam PF00152 tRNA synthetases class II (D, K and N) 154 491 3.7E-84 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 493 1.4E-221 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 Pfam PF01336 OB-fold nucleic acid binding domain 60 135 5.4E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 494 45.496 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 UP17_00450 c3fb72e392876c0a1af5ad4a4ad9e596 494 Gene3D G3DSA:2.40.50.140 6 146 7.3E-46 T 11-10-2018 UP17_09905 3323a5abc35f3dbcb4c1b7dbe390acba 263 Hamap MF_01830 Putative hydro-lyase . 8 262 53.653 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 UP17_09905 3323a5abc35f3dbcb4c1b7dbe390acba 263 Pfam PF07286 Protein of unknown function (DUF1445) 112 254 6.4E-66 T 11-10-2018 IPR009906 D-glutamate cyclase UP17_09905 3323a5abc35f3dbcb4c1b7dbe390acba 263 SUPERFAMILY SSF160920 3 255 1.44E-114 T 11-10-2018 IPR038021 Putative hydro-lyase UP17_09905 3323a5abc35f3dbcb4c1b7dbe390acba 263 PIRSF PIRSF029755 1 263 3.3E-127 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 UP17_09905 3323a5abc35f3dbcb4c1b7dbe390acba 263 Gene3D G3DSA:3.40.1640.10 17 250 3.4E-98 T 11-10-2018 UP17_09905 3323a5abc35f3dbcb4c1b7dbe390acba 263 Gene3D G3DSA:3.30.2040.10 122 234 3.4E-98 T 11-10-2018 UP17_12675 b6ad778a48091228329ac669ae44de19 202 Pfam PF00805 Pentapeptide repeats (8 copies) 76 107 1.5E-4 T 11-10-2018 IPR001646 Pentapeptide repeat UP17_12675 b6ad778a48091228329ac669ae44de19 202 Pfam PF00805 Pentapeptide repeats (8 copies) 117 154 1.2E-7 T 11-10-2018 IPR001646 Pentapeptide repeat UP17_12675 b6ad778a48091228329ac669ae44de19 202 Gene3D G3DSA:2.160.20.100 18 180 2.3E-24 T 11-10-2018 UP17_12675 b6ad778a48091228329ac669ae44de19 202 SUPERFAMILY SSF141571 30 165 1.83E-24 T 11-10-2018 UP17_21265 a62c068f67d111f439947cd8683ed940 126 Gene3D G3DSA:1.10.10.10 2 78 8.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21265 a62c068f67d111f439947cd8683ed940 126 Gene3D G3DSA:1.10.4040.10 79 123 2.9E-18 T 11-10-2018 UP17_21265 a62c068f67d111f439947cd8683ed940 126 Pfam PF03965 Penicillinase repressor 8 121 5.0E-34 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 UP17_21265 a62c068f67d111f439947cd8683ed940 126 PIRSF PIRSF019455 1 126 1.1E-35 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 UP17_21265 a62c068f67d111f439947cd8683ed940 126 SUPERFAMILY SSF46785 6 123 2.37E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_24025 e106a53e8f9a7adab19a3438a9525b92 142 Pfam PF07977 FabA-like domain 11 134 1.4E-36 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_24025 e106a53e8f9a7adab19a3438a9525b92 142 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 4.1E-60 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_24025 e106a53e8f9a7adab19a3438a9525b92 142 SUPERFAMILY SSF54637 1 139 2.6E-49 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_24025 e106a53e8f9a7adab19a3438a9525b92 142 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 35.822 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 UP17_24025 e106a53e8f9a7adab19a3438a9525b92 142 Gene3D G3DSA:3.10.129.10 1 140 2.9E-60 T 11-10-2018 UP17_03885 166ffefa8adfa9c69d8f677020fa7336 261 Pfam PF06182 ABC-2 family transporter protein 33 260 2.2E-56 T 11-10-2018 IPR010390 Protein of unknown function DUF990 UP17_06380 0635ab5f2885281fb9b168aad4868460 325 SUPERFAMILY SSF74650 15 320 7.53E-48 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 UP17_06380 0635ab5f2885281fb9b168aad4868460 325 Pfam PF01263 Aldose 1-epimerase 16 319 2.4E-45 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 UP17_06380 0635ab5f2885281fb9b168aad4868460 325 Gene3D G3DSA:2.70.98.10 1 324 9.2E-98 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 UP17_02585 c37525df0eb585098c870faa086141cd 441 Gene3D G3DSA:3.40.640.10 70 329 3.7E-158 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_02585 c37525df0eb585098c870faa086141cd 441 Gene3D G3DSA:3.90.1150.10 15 432 3.7E-158 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_02585 c37525df0eb585098c870faa086141cd 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_02585 c37525df0eb585098c870faa086141cd 441 PIRSF PIRSF000521 175 436 7.2E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_02585 c37525df0eb585098c870faa086141cd 441 PIRSF PIRSF000521 25 183 2.7E-9 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_02585 c37525df0eb585098c870faa086141cd 441 Pfam PF00202 Aminotransferase class-III 35 432 5.1E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_02585 c37525df0eb585098c870faa086141cd 441 SUPERFAMILY SSF53383 16 434 2.23E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_02275 35e483b2f6ba49a7e5fe9899c92fe17a 386 Pfam PF00155 Aminotransferase class I and II 35 374 3.4E-65 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_02275 35e483b2f6ba49a7e5fe9899c92fe17a 386 Gene3D G3DSA:3.90.1150.10 30 372 8.3E-138 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_02275 35e483b2f6ba49a7e5fe9899c92fe17a 386 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 15 375 3.4E-141 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 UP17_02275 35e483b2f6ba49a7e5fe9899c92fe17a 386 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 230 239 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 UP17_02275 35e483b2f6ba49a7e5fe9899c92fe17a 386 SUPERFAMILY SSF53383 15 383 1.07E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_02275 35e483b2f6ba49a7e5fe9899c92fe17a 386 Gene3D G3DSA:3.40.640.10 49 283 8.3E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_11730 a4a4efd3450f494abda54a4d5ece582a 335 Gene3D G3DSA:2.30.30.40 142 209 3.0E-24 T 11-10-2018 UP17_11730 a4a4efd3450f494abda54a4d5ece582a 335 Pfam PF00877 NlpC/P60 family 225 332 2.5E-28 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_11730 a4a4efd3450f494abda54a4d5ece582a 335 Gene3D G3DSA:2.30.30.40 27 140 7.3E-40 T 11-10-2018 UP17_11730 a4a4efd3450f494abda54a4d5ece582a 335 Gene3D G3DSA:3.90.1720.10 211 335 8.3E-42 T 11-10-2018 UP17_11730 a4a4efd3450f494abda54a4d5ece582a 335 SUPERFAMILY SSF54001 211 334 5.4E-40 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_23310 20dd35fadfc150797880c33157ec2587 623 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 6 619 5.9E-137 T 11-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 UP17_23310 20dd35fadfc150797880c33157ec2587 623 ProSitePatterns PS01074 Terpene synthases signature. 475 489 - T 11-10-2018 IPR002365 Terpene synthase, conserved site GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 UP17_23310 20dd35fadfc150797880c33157ec2587 623 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 302 618 1.0E-88 T 11-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 UP17_23310 20dd35fadfc150797880c33157ec2587 623 SUPERFAMILY SSF48239 26 287 2.47E-47 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid UP17_23310 20dd35fadfc150797880c33157ec2587 623 Gene3D G3DSA:1.50.10.20 5 616 5.9E-203 T 11-10-2018 UP17_23310 20dd35fadfc150797880c33157ec2587 623 SUPERFAMILY SSF48239 291 620 1.8E-82 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid UP17_23310 20dd35fadfc150797880c33157ec2587 623 Gene3D G3DSA:1.50.10.20 22 299 5.9E-203 T 11-10-2018 UP17_23310 20dd35fadfc150797880c33157ec2587 623 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 6 288 7.1E-76 T 11-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 UP17_23310 20dd35fadfc150797880c33157ec2587 623 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 5 618 1.0E-125 T 11-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.6E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.6E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.6E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.4E-30 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 5.5E-30 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 Gene3D G3DSA:3.30.1340.10 1 84 7.4E-35 T 11-10-2018 IPR035895 HPr-like superfamily UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 SUPERFAMILY SSF55594 3 83 2.88E-27 T 11-10-2018 IPR035895 HPr-like superfamily UP17_23505 d38dbf7acbce58fef7e893fee6e28628 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site UP17_10205 d605e9814338f4455e088554387b6f69 158 SUPERFAMILY SSF51182 18 141 9.83E-28 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_10205 d605e9814338f4455e088554387b6f69 158 Gene3D G3DSA:2.60.120.10 10 158 3.5E-46 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_10205 d605e9814338f4455e088554387b6f69 158 Pfam PF12973 ChrR Cupin-like domain 25 104 2.4E-9 T 11-10-2018 IPR025979 ChrR-like cupin domain UP17_09745 071bdc2edef0dd187d1ef4766e80404a 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 287 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_09745 071bdc2edef0dd187d1ef4766e80404a 450 Pfam PF00202 Aminotransferase class-III 25 446 5.1E-103 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_09745 071bdc2edef0dd187d1ef4766e80404a 450 SUPERFAMILY SSF53383 5 448 1.65E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_09745 071bdc2edef0dd187d1ef4766e80404a 450 Gene3D G3DSA:3.40.640.10 64 339 2.1E-147 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_09745 071bdc2edef0dd187d1ef4766e80404a 450 PIRSF PIRSF000521 2 409 4.6E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_09745 071bdc2edef0dd187d1ef4766e80404a 450 Gene3D G3DSA:3.90.1150.10 12 445 2.1E-147 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_21160 3c4cc906abcaf086401a79a77d1c32fe 393 Pfam PF12051 Protein of unknown function (DUF3533) 21 363 1.0E-24 T 11-10-2018 IPR022703 Domain of unknown function DUF3533 UP17_21160 3c4cc906abcaf086401a79a77d1c32fe 393 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 4 166 8.3E-30 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal UP17_19935 6c6126543030f19d47da8c62c5ed22c3 694 SUPERFAMILY SSF56601 55 379 4.4E-73 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_19935 6c6126543030f19d47da8c62c5ed22c3 694 Pfam PF00144 Beta-lactamase 57 380 4.8E-62 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_19935 6c6126543030f19d47da8c62c5ed22c3 694 Gene3D G3DSA:3.40.710.10 35 392 4.1E-74 T 11-10-2018 UP17_07780 002c8fc8caaf21981aa1d4a83f9b0c5e 259 Pfam PF02108 Flagellar assembly protein FliH 124 242 1.3E-16 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE UP17_07780 002c8fc8caaf21981aa1d4a83f9b0c5e 259 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 256 2.7E-60 T 11-10-2018 IPR022524 Flagellar assembly FliH, Bacilli UP17_04640 dcd4fac9681643a9d74f15158910e526 332 Pfam PF01384 Phosphate transporter family 22 320 1.0E-89 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 UP17_20555 7409921c4161040da8de538dc3b4981c 280 Gene3D G3DSA:1.10.10.10 5 99 8.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20555 7409921c4161040da8de538dc3b4981c 280 Pfam PF01380 SIS domain 127 230 9.1E-21 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_20555 7409921c4161040da8de538dc3b4981c 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 76 1.4E-20 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 UP17_20555 7409921c4161040da8de538dc3b4981c 280 Gene3D G3DSA:3.40.50.10490 100 277 4.3E-43 T 11-10-2018 UP17_20555 7409921c4161040da8de538dc3b4981c 280 SUPERFAMILY SSF46689 7 77 1.79E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_20555 7409921c4161040da8de538dc3b4981c 280 SUPERFAMILY SSF53697 98 276 6.02E-38 T 11-10-2018 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 Gene3D G3DSA:2.70.50.50 32 205 1.7E-64 T 11-10-2018 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 SUPERFAMILY SSF51055 405 431 3.14E-5 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 Gene3D G3DSA:2.60.40.10 214 300 9.8E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 Gene3D G3DSA:2.60.40.10 308 399 2.9E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 SUPERFAMILY SSF49265 215 399 3.37E-29 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 37 203 2.0E-36 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 Pfam PF00041 Fibronectin type III domain 218 293 6.1E-8 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 Pfam PF00041 Fibronectin type III domain 312 388 7.4E-8 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 Gene3D G3DSA:2.10.10.20 406 451 2.7E-6 T 11-10-2018 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 SMART SM00060 216 289 4.9E-10 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 SMART SM00060 310 388 2.0E-9 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 UP17_24605 b2c5624f3cba03e439cc1638d4cdb934 452 SUPERFAMILY SSF81296 37 205 6.02E-54 T 11-10-2018 IPR014756 Immunoglobulin E-set UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 Gene3D G3DSA:1.10.246.230 245 343 2.3E-21 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 SUPERFAMILY SSF56235 41 523 8.3E-115 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 Pfam PF01019 Gamma-glutamyltranspeptidase 58 521 9.1E-100 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 Gene3D G3DSA:3.60.20.40 351 524 1.5E-55 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 120 138 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 138 157 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 229 245 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 351 369 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 65 90 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 401 416 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 258 277 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 425 442 1.0E-49 T 11-10-2018 UP17_18950 330e42ed4d7d951630c5bc78e88a5163 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 373 391 1.0E-49 T 11-10-2018 UP17_13170 b092b4e98b000324e79f0d00552097a1 285 Gene3D G3DSA:1.10.12.10 226 261 1.9E-7 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal UP17_13170 b092b4e98b000324e79f0d00552097a1 285 SUPERFAMILY SSF52096 3 261 2.95E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_13170 b092b4e98b000324e79f0d00552097a1 285 Gene3D G3DSA:3.90.226.10 3 222 1.6E-69 T 11-10-2018 UP17_13170 b092b4e98b000324e79f0d00552097a1 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 261 2.1E-56 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_06655 8df145b411b78378c557eae3122d08c6 247 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 14 243 28.543 T 11-10-2018 IPR014244 RNA polymerase sigma-I type UP17_06655 8df145b411b78378c557eae3122d08c6 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 225 8.0E-14 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_06655 8df145b411b78378c557eae3122d08c6 247 Pfam PF04542 Sigma-70 region 2 34 103 3.3E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_06655 8df145b411b78378c557eae3122d08c6 247 PIRSF PIRSF038953 5 246 2.1E-68 T 11-10-2018 IPR014244 RNA polymerase sigma-I type UP17_06655 8df145b411b78378c557eae3122d08c6 247 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 19 241 1.4E-79 T 11-10-2018 IPR014244 RNA polymerase sigma-I type UP17_06655 8df145b411b78378c557eae3122d08c6 247 Gene3D G3DSA:1.10.10.10 54 164 3.3E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_06655 8df145b411b78378c557eae3122d08c6 247 SUPERFAMILY SSF88946 21 102 2.04E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 SUPERFAMILY SSF55021 296 358 4.71E-10 T 11-10-2018 UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 SUPERFAMILY SSF55021 372 448 1.73E-20 T 11-10-2018 UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 Pfam PF00696 Amino acid kinase family 2 276 4.2E-37 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 Gene3D G3DSA:3.30.2130.10 290 448 2.0E-58 T 11-10-2018 UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 PIRSF PIRSF000726 1 448 1.1E-76 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 Pfam PF13840 ACT domain 380 444 1.2E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 SUPERFAMILY SSF53633 1 290 4.97E-64 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 8.4E-82 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 Gene3D G3DSA:3.40.1160.10 1 289 1.0E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_02440 5ce3fbb270d467bb2e9b0b6809efd7b4 448 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_22105 1bacf36061c10a80ad410c63b78bf7dc 333 Pfam PF09084 NMT1/THI5 like 46 255 3.7E-22 T 11-10-2018 IPR015168 SsuA/THI5-like UP17_22105 1bacf36061c10a80ad410c63b78bf7dc 333 Gene3D G3DSA:3.40.190.10 26 129 1.3E-14 T 11-10-2018 UP17_22105 1bacf36061c10a80ad410c63b78bf7dc 333 SUPERFAMILY SSF53850 31 256 4.27E-31 T 11-10-2018 UP17_22105 1bacf36061c10a80ad410c63b78bf7dc 333 Gene3D G3DSA:3.40.190.10 145 332 1.1E-32 T 11-10-2018 UP17_11170 34a1f0beaa798b11308be4c6ad6ba1e1 96 ProDom PD061728 YWQI YWQIA COIL COILED 4 86 4.0E-21 T 11-10-2018 IPR020299 Uncharacterised protein family YwqI UP17_11170 34a1f0beaa798b11308be4c6ad6ba1e1 96 Pfam PF17279 Family of unknown function (DUF5344) 1 87 7.6E-22 T 11-10-2018 UP17_09640 080853a7b89ccb6708c04810e8425a0a 299 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_09640 080853a7b89ccb6708c04810e8425a0a 299 SMART SM00382 27 208 1.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_09640 080853a7b89ccb6708c04810e8425a0a 299 Gene3D G3DSA:3.40.50.300 1 232 5.1E-60 T 11-10-2018 UP17_09640 080853a7b89ccb6708c04810e8425a0a 299 SUPERFAMILY SSF52540 3 222 1.52E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09640 080853a7b89ccb6708c04810e8425a0a 299 Pfam PF00005 ABC transporter 19 158 5.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_09640 080853a7b89ccb6708c04810e8425a0a 299 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 4.3E-16 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 UP17_03490 4da3573b1930547dc17fc2ae6e3ab274 94 Pfam PF01527 Transposase 5 86 6.9E-9 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_03490 4da3573b1930547dc17fc2ae6e3ab274 94 Gene3D G3DSA:1.10.10.60 6 92 9.9E-8 T 11-10-2018 UP17_03490 4da3573b1930547dc17fc2ae6e3ab274 94 SUPERFAMILY SSF46689 2 92 1.7E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_02030 5b31e61575ee03573a615b60730ac3f9 231 SUPERFAMILY SSF51395 5 220 9.52E-53 T 11-10-2018 UP17_02030 5b31e61575ee03573a615b60730ac3f9 231 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 9 223 1.8E-74 T 11-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UP17_02030 5b31e61575ee03573a615b60730ac3f9 231 Pfam PF01884 PcrB family 2 225 1.0E-83 T 11-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UP17_02030 5b31e61575ee03573a615b60730ac3f9 231 Gene3D G3DSA:3.20.20.390 1 230 3.1E-96 T 11-10-2018 IPR038597 GGGP/HepGP synthase superfamily UP17_02030 5b31e61575ee03573a615b60730ac3f9 231 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 28.838 T 11-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UP17_14565 65534f1dcd5b0293289e24d5b6d84ac3 496 Gene3D G3DSA:1.20.1730.10 22 494 2.2E-34 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_14565 65534f1dcd5b0293289e24d5b6d84ac3 496 Pfam PF00474 Sodium:solute symporter family 34 428 2.9E-23 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_09850 8757e25f25577c9dc8de8c3cfc9f498c 476 SUPERFAMILY SSF56176 27 206 4.35E-37 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_09850 8757e25f25577c9dc8de8c3cfc9f498c 476 Gene3D G3DSA:3.40.462.10 212 434 1.6E-32 T 11-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 UP17_09850 8757e25f25577c9dc8de8c3cfc9f498c 476 Gene3D G3DSA:3.30.465.10 90 211 1.6E-32 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 UP17_09850 8757e25f25577c9dc8de8c3cfc9f498c 476 Pfam PF04030 D-arabinono-1,4-lactone oxidase 341 472 1.1E-6 T 11-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 UP17_09850 8757e25f25577c9dc8de8c3cfc9f498c 476 Pfam PF01565 FAD binding domain 48 177 4.6E-26 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UP17_09850 8757e25f25577c9dc8de8c3cfc9f498c 476 SUPERFAMILY SSF55103 182 464 5.01E-21 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 UP17_09850 8757e25f25577c9dc8de8c3cfc9f498c 476 Gene3D G3DSA:3.30.43.10 31 464 1.6E-32 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 Gene3D G3DSA:1.10.10.10 1 82 3.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 SUPERFAMILY SSF46785 3 111 1.7E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 Pfam PF03466 LysR substrate binding domain 90 288 1.6E-31 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 Gene3D G3DSA:3.40.190.290 83 287 4.1E-66 T 11-10-2018 UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_06910 a9e887b226ce4b1e98a5409e6dced277 294 SUPERFAMILY SSF53850 90 291 3.5E-27 T 11-10-2018 UP17_19280 0fe7717e874c7f669cea8c8c8f96f4e8 379 Gene3D G3DSA:2.60.40.1630 75 232 8.3E-46 T 11-10-2018 UP17_19280 0fe7717e874c7f669cea8c8c8f96f4e8 379 Pfam PF13786 Domain of unknown function (DUF4179) 43 147 9.6E-17 T 11-10-2018 IPR025436 Domain of unknown function DUF4179 UP17_19280 0fe7717e874c7f669cea8c8c8f96f4e8 379 Gene3D G3DSA:2.60.40.1640 233 379 2.3E-55 T 11-10-2018 UP17_09790 4668568706fba1bf41dd4518fa05326e 574 Pfam PF00005 ABC transporter 348 495 8.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_09790 4668568706fba1bf41dd4518fa05326e 574 Gene3D G3DSA:3.40.50.300 317 572 1.3E-85 T 11-10-2018 UP17_09790 4668568706fba1bf41dd4518fa05326e 574 SUPERFAMILY SSF52540 325 567 4.78E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09790 4668568706fba1bf41dd4518fa05326e 574 SMART SM00382 357 543 1.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_09790 4668568706fba1bf41dd4518fa05326e 574 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_09790 4668568706fba1bf41dd4518fa05326e 574 Gene3D G3DSA:1.20.1560.10 1 315 2.9E-95 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_09790 4668568706fba1bf41dd4518fa05326e 574 SUPERFAMILY SSF90123 4 318 3.01E-82 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_09790 4668568706fba1bf41dd4518fa05326e 574 Pfam PF00664 ABC transporter transmembrane region 18 286 1.2E-49 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_14815 e620b2ac6268b42d23e40103cc4eb27a 329 Pfam PF11927 Protein of unknown function (DUF3445) 31 277 2.0E-42 T 11-10-2018 IPR021848 Protein of unknown function DUF3445 UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 SMART SM00347 29 129 1.4E-25 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 SUPERFAMILY SSF46785 7 140 3.87E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 Pfam PF01047 MarR family 36 93 7.6E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 Gene3D G3DSA:1.10.10.10 1 141 9.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_06745 9f5d4175eec10c58027ede78b7d33a2d 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 562 3.1E-247 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 Pfam PF03129 Anticodon binding domain 472 563 2.9E-19 T 11-10-2018 IPR004154 Anticodon-binding UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 Gene3D G3DSA:3.40.50.800 4 550 2.9E-257 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 PIRSF PIRSF001535 1 566 5.3E-266 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 Gene3D G3DSA:3.90.960.10 240 386 2.9E-257 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 1.1E-58 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 SUPERFAMILY SSF52954 460 565 1.96E-30 T 11-10-2018 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 Gene3D G3DSA:3.30.930.10 11 462 2.9E-257 T 11-10-2018 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 SUPERFAMILY SSF55681 9 475 8.36E-102 T 11-10-2018 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 Pfam PF04073 Aminoacyl-tRNA editing domain 257 373 2.7E-27 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 41.533 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 SUPERFAMILY SSF55826 218 386 9.03E-32 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 UP17_07965 ddc8d12a6ee3b65578b0310ce5503c65 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 UP17_05910 86a7dde8cd0120fbdc45e8b284602822 163 Pfam PF12867 DinB superfamily 15 151 6.8E-10 T 11-10-2018 IPR024775 DinB-like domain UP17_05910 86a7dde8cd0120fbdc45e8b284602822 163 Gene3D G3DSA:1.20.120.450 4 162 1.9E-21 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_05910 86a7dde8cd0120fbdc45e8b284602822 163 SUPERFAMILY SSF109854 10 155 2.14E-15 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_05240 b7a3ad6a536e93b7d3e1f9fe21a7e441 370 Gene3D G3DSA:3.90.1150.10 25 357 3.6E-120 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_05240 b7a3ad6a536e93b7d3e1f9fe21a7e441 370 Gene3D G3DSA:3.40.640.10 48 272 3.6E-120 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_05240 b7a3ad6a536e93b7d3e1f9fe21a7e441 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 361 1.4E-108 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 UP17_05240 b7a3ad6a536e93b7d3e1f9fe21a7e441 370 SUPERFAMILY SSF53383 9 356 7.15E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05240 b7a3ad6a536e93b7d3e1f9fe21a7e441 370 Pfam PF00155 Aminotransferase class I and II 35 360 1.6E-56 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_05240 b7a3ad6a536e93b7d3e1f9fe21a7e441 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 364 58.485 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 UP17_12345 39492fca7e0a033be2c134077b4df5c9 220 SUPERFAMILY SSF161098 18 202 3.79E-33 T 11-10-2018 IPR035906 MetI-like superfamily UP17_12345 39492fca7e0a033be2c134077b4df5c9 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 211 5.2E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_12345 39492fca7e0a033be2c134077b4df5c9 220 Gene3D G3DSA:1.10.3720.10 12 210 6.6E-29 T 11-10-2018 IPR035906 MetI-like superfamily UP17_19450 7c779a97fe33a82918c6573ba0458954 200 Gene3D G3DSA:3.40.109.10 5 200 6.4E-81 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_19450 7c779a97fe33a82918c6573ba0458954 200 SUPERFAMILY SSF55469 7 200 2.09E-65 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_19450 7c779a97fe33a82918c6573ba0458954 200 Pfam PF00881 Nitroreductase family 12 179 1.2E-22 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_22355 10c44de733e305c2e357ce15b9f5fb05 400 SUPERFAMILY SSF53383 28 394 2.16E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_22355 10c44de733e305c2e357ce15b9f5fb05 400 Gene3D G3DSA:3.90.1150.10 30 392 5.3E-113 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_22355 10c44de733e305c2e357ce15b9f5fb05 400 Gene3D G3DSA:3.40.640.10 66 287 5.3E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_22355 10c44de733e305c2e357ce15b9f5fb05 400 Pfam PF00155 Aminotransferase class I and II 50 387 1.7E-28 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_03350 8caf1859afdfdc6c0d513a4dbfbc6651 228 Gene3D G3DSA:1.10.4190.10 2 206 1.5E-70 T 11-10-2018 IPR038277 UreF domain superfamily UP17_03350 8caf1859afdfdc6c0d513a4dbfbc6651 228 PIRSF PIRSF009467 2 228 1.9E-77 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 UP17_03350 8caf1859afdfdc6c0d513a4dbfbc6651 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 4 228 27.775 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 UP17_03350 8caf1859afdfdc6c0d513a4dbfbc6651 228 Pfam PF01730 UreF 36 185 2.7E-33 T 11-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 UP17_13355 63f4ac2426d8fe0cfd5c70cfa59ecf51 328 Gene3D G3DSA:3.40.50.720 4 307 5.6E-120 T 11-10-2018 UP17_13355 63f4ac2426d8fe0cfd5c70cfa59ecf51 328 Gene3D G3DSA:3.90.25.30 165 320 5.6E-120 T 11-10-2018 UP17_13355 63f4ac2426d8fe0cfd5c70cfa59ecf51 328 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 4.9E-101 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain UP17_13355 63f4ac2426d8fe0cfd5c70cfa59ecf51 328 SUPERFAMILY SSF51735 5 260 4.5E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 6.0E-30 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 SUPERFAMILY SSF53328 3 206 1.44E-68 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 Gene3D G3DSA:3.40.50.170 1 206 1.2E-86 T 11-10-2018 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 Gene3D G3DSA:3.10.25.10 207 316 1.1E-37 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 37.245 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 SUPERFAMILY SSF50486 205 309 3.45E-32 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 Pfam PF00551 Formyl transferase 3 180 2.8E-41 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 UP17_07515 616651bc0bd942d87a1e472fb2818a91 319 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 303 5.0E-114 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 UP17_02210 92a85552be8b2133972356c912b9e305 337 Gene3D G3DSA:3.40.50.720 148 285 4.5E-134 T 11-10-2018 UP17_02210 92a85552be8b2133972356c912b9e305 337 Pfam PF00107 Zinc-binding dehydrogenase 175 300 1.6E-33 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_02210 92a85552be8b2133972356c912b9e305 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 5.7E-36 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_02210 92a85552be8b2133972356c912b9e305 337 SUPERFAMILY SSF50129 1 172 1.07E-56 T 11-10-2018 IPR011032 GroES-like superfamily UP17_02210 92a85552be8b2133972356c912b9e305 337 Gene3D G3DSA:3.90.180.10 5 327 4.5E-134 T 11-10-2018 UP17_02210 92a85552be8b2133972356c912b9e305 337 SUPERFAMILY SSF51735 138 304 1.09E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_02210 92a85552be8b2133972356c912b9e305 337 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 UP17_02210 92a85552be8b2133972356c912b9e305 337 SMART SM00829 8 334 9.3E-6 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_20440 4b74dd8fed83c3e5346d50192be16567 66 Pfam PF11755 Protein of unknown function (DUF3311) 6 64 6.6E-17 T 11-10-2018 IPR021741 Protein of unknown function DUF3311 UP17_06490 dfb939d197501073f50319e0fe49a987 180 Gene3D G3DSA:3.10.129.10 1 165 2.1E-53 T 11-10-2018 UP17_06490 dfb939d197501073f50319e0fe49a987 180 Pfam PF03061 Thioesterase superfamily 27 100 6.9E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_06490 dfb939d197501073f50319e0fe49a987 180 SUPERFAMILY SSF54637 4 155 6.43E-46 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_13915 ced372889d759ad4beb112c303a07c1d 86 Pfam PF07510 Protein of unknown function (DUF1524) 3 85 3.1E-13 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 UP17_03310 c6e9d8465326cbdc663d94481d319cb6 422 SUPERFAMILY SSF103473 19 418 4.97E-44 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_03310 c6e9d8465326cbdc663d94481d319cb6 422 Gene3D G3DSA:1.20.1250.20 19 417 8.4E-38 T 11-10-2018 UP17_03310 c6e9d8465326cbdc663d94481d319cb6 422 Pfam PF07690 Major Facilitator Superfamily 45 346 4.2E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_18165 1ee25d7b4fdae7d27f73d5f0d033c261 153 Pfam PF04284 Protein of unknown function (DUF441) 7 146 7.2E-47 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame UP17_18165 1ee25d7b4fdae7d27f73d5f0d033c261 153 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 18.25 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame UP17_18165 1ee25d7b4fdae7d27f73d5f0d033c261 153 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 131 2.0E-40 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 Gene3D G3DSA:3.40.50.2020 153 293 1.3E-125 T 11-10-2018 UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 Gene3D G3DSA:3.40.50.2020 13 305 1.3E-125 T 11-10-2018 UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 SMART SM01400 10 126 1.1E-81 T 11-10-2018 UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 5.5E-129 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 1.8E-51 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 5.7E-25 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 SUPERFAMILY SSF53271 75 308 5.7E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_00295 9403243e4b34e27cd8c71b149791fa6a 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 317 51.108 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.9E-63 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 Gene3D G3DSA:3.90.1170.10 1 144 8.0E-56 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.114 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.8E-53 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00725 32f60474daf90eb83a75ebca6196fb21 144 SUPERFAMILY SSF54686 1 137 1.31E-59 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_20965 07cb518d592cab5dd1715c9505a6f832 169 SUPERFAMILY SSF109854 11 165 1.83E-32 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_20965 07cb518d592cab5dd1715c9505a6f832 169 Pfam PF12867 DinB superfamily 29 164 5.8E-19 T 11-10-2018 IPR024775 DinB-like domain UP17_20965 07cb518d592cab5dd1715c9505a6f832 169 Gene3D G3DSA:1.20.120.450 24 167 1.4E-31 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 Gene3D G3DSA:3.40.140.20 378 511 7.8E-56 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 Pfam PF02142 MGS-like domain 14 129 1.2E-28 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 511 44.45 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 SMART SM00798 134 446 6.3E-202 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 Gene3D G3DSA:3.40.140.20 203 359 6.4E-61 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 445 1.1E-119 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 SMART SM00851 14 129 1.4E-52 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 Gene3D G3DSA:3.40.50.1380 1 197 3.9E-87 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 SUPERFAMILY SSF53927 207 511 6.02E-127 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 511 6.1E-235 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 PIRSF PIRSF000414 1 511 5.8E-213 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 UP17_02000 736cc6a7862f5509049c1c1f925d47cb 511 SUPERFAMILY SSF52335 2 193 3.27E-68 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily UP17_03815 d5b64d7da1c226a10457895e0ffcf999 176 PIRSF PIRSF028345 3 176 2.7E-77 T 11-10-2018 IPR016882 Uncharacterised protein family UPF0374 UP17_03815 d5b64d7da1c226a10457895e0ffcf999 176 Hamap MF_01568 UPF0374 protein . 2 176 49.257 T 11-10-2018 IPR016882 Uncharacterised protein family UPF0374 UP17_03815 d5b64d7da1c226a10457895e0ffcf999 176 Pfam PF04167 Protein of unknown function (DUF402) 61 125 1.1E-17 T 11-10-2018 IPR007295 Domain of unknown function DUF402 UP17_03815 d5b64d7da1c226a10457895e0ffcf999 176 Gene3D G3DSA:2.40.380.10 23 171 3.8E-12 T 11-10-2018 IPR035930 FomD-like superfamily UP17_03815 d5b64d7da1c226a10457895e0ffcf999 176 SUPERFAMILY SSF159234 5 171 1.83E-31 T 11-10-2018 IPR035930 FomD-like superfamily UP17_21555 f2f0d1020e94efb4065c63df7a593cbb 207 Gene3D G3DSA:3.40.50.150 2 197 3.7E-26 T 11-10-2018 UP17_21555 f2f0d1020e94efb4065c63df7a593cbb 207 SUPERFAMILY SSF53335 10 162 1.56E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_21555 f2f0d1020e94efb4065c63df7a593cbb 207 Pfam PF08241 Methyltransferase domain 47 138 4.4E-17 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 UP17_16035 419ede5cfea6e855528d92ac55f216c2 244 SUPERFAMILY SSF51695 1 238 5.23E-73 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_16035 419ede5cfea6e855528d92ac55f216c2 244 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 232 1.6E-48 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 UP17_16035 419ede5cfea6e855528d92ac55f216c2 244 Gene3D G3DSA:3.20.20.190 1 239 2.6E-79 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 25 550 3.2E-166 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 Gene3D G3DSA:3.60.20.40 379 556 1.2E-59 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 SUPERFAMILY SSF56235 17 557 2.32E-159 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 47 72 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 379 397 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 236 252 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 403 421 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 434 449 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 122 140 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 140 159 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 475 1.8E-64 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 Pfam PF01019 Gamma-glutamyltranspeptidase 40 552 2.1E-146 T 11-10-2018 UP17_14400 303d06d49545662da6a4458f7a1583ba 564 Gene3D G3DSA:1.10.246.130 252 378 1.8E-35 T 11-10-2018 UP17_16890 8f3d675635d91e3e868bebb6af645840 179 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 173 1.1E-37 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 UP17_16890 8f3d675635d91e3e868bebb6af645840 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UP17_16890 8f3d675635d91e3e868bebb6af645840 179 Gene3D G3DSA:1.20.120.1760 4 176 1.1E-11 T 11-10-2018 UP17_16890 8f3d675635d91e3e868bebb6af645840 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 81 2.1E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 UP17_05420 76cf047fa7d9c222eaca13b796aa554f 379 PIRSF PIRSF032178 3 379 3.4E-118 T 11-10-2018 IPR016991 Protein of unknown function UCP032178 UP17_05420 76cf047fa7d9c222eaca13b796aa554f 379 Pfam PF04286 Protein of unknown function (DUF445) 13 378 1.2E-64 T 11-10-2018 IPR007383 Protein of unknown function DUF445 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 Gene3D G3DSA:3.90.780.10 315 510 3.6E-68 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 SUPERFAMILY SSF56300 1 295 1.07E-72 T 11-10-2018 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 Pfam PF02872 5'-nucleotidase, C-terminal domain 319 471 8.5E-46 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 SUPERFAMILY SSF55816 320 510 3.53E-56 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 PRINTS PR01607 Apyrase family signature 367 390 7.9E-33 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 PRINTS PR01607 Apyrase family signature 445 464 7.9E-33 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 PRINTS PR01607 Apyrase family signature 176 193 7.9E-33 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 PRINTS PR01607 Apyrase family signature 238 258 7.9E-33 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 PRINTS PR01607 Apyrase family signature 201 224 7.9E-33 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 6.6E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_21455 e347db80c50b4c8ab6ca211a9a27f7b7 603 Gene3D G3DSA:3.60.21.10 1 299 4.1E-91 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_03215 566f0b2beeb686d444ff58b59084f394 172 SUPERFAMILY SSF55729 1 161 1.6E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_03215 566f0b2beeb686d444ff58b59084f394 172 Gene3D G3DSA:3.40.630.30 1 171 4.6E-50 T 11-10-2018 UP17_03215 566f0b2beeb686d444ff58b59084f394 172 Pfam PF00583 Acetyltransferase (GNAT) family 30 147 2.1E-17 T 11-10-2018 IPR000182 GNAT domain UP17_07545 bba4c4eed54b7c4c4efd06c943e549fa 215 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 UP17_07545 bba4c4eed54b7c4c4efd06c943e549fa 215 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 8.8E-87 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 UP17_07545 bba4c4eed54b7c4c4efd06c943e549fa 215 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 5.6E-93 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 UP17_07545 bba4c4eed54b7c4c4efd06c943e549fa 215 PIRSF PIRSF001461 1 215 5.9E-96 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 UP17_07545 bba4c4eed54b7c4c4efd06c943e549fa 215 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 UP17_07545 bba4c4eed54b7c4c4efd06c943e549fa 215 Gene3D G3DSA:3.20.20.70 1 215 5.6E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_07545 bba4c4eed54b7c4c4efd06c943e549fa 215 SUPERFAMILY SSF51366 1 213 9.42E-76 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_16880 6547ac33e4ebda8416ad26c31b1ef97c 173 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 3 164 2.4E-55 T 11-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like UP17_16880 6547ac33e4ebda8416ad26c31b1ef97c 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 28 138 5.6E-22 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 UP17_16880 6547ac33e4ebda8416ad26c31b1ef97c 173 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 60 129 5.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_16880 6547ac33e4ebda8416ad26c31b1ef97c 173 Gene3D G3DSA:3.40.50.1000 16 155 4.4E-22 T 11-10-2018 IPR023214 HAD superfamily UP17_16880 6547ac33e4ebda8416ad26c31b1ef97c 173 SUPERFAMILY SSF56784 15 150 1.04E-26 T 11-10-2018 IPR036412 HAD-like superfamily UP17_16880 6547ac33e4ebda8416ad26c31b1ef97c 173 Pfam PF13242 HAD-hyrolase-like 90 136 8.2E-11 T 11-10-2018 UP17_00815 dbaeca47b73520a7aa61fc031150e8b9 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.397 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UP17_00815 dbaeca47b73520a7aa61fc031150e8b9 129 Gene3D G3DSA:3.30.420.80 1 129 1.8E-54 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00815 dbaeca47b73520a7aa61fc031150e8b9 129 SUPERFAMILY SSF53137 14 129 4.38E-50 T 11-10-2018 UP17_00815 dbaeca47b73520a7aa61fc031150e8b9 129 PIRSF PIRSF002131 1 129 3.7E-54 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UP17_00815 dbaeca47b73520a7aa61fc031150e8b9 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site UP17_00815 dbaeca47b73520a7aa61fc031150e8b9 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 5.2E-59 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00815 dbaeca47b73520a7aa61fc031150e8b9 129 Pfam PF00411 Ribosomal protein S11 19 128 2.3E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 UP17_15675 9106a29e8321b116b908a8529915713b 162 Pfam PF13047 Protein of unknown function (DUF3907) 11 156 1.2E-61 T 11-10-2018 IPR025013 Protein of unknown function DUF3907 UP17_09125 a13b113439e3307649e2d13f3c1251ef 485 SUPERFAMILY SSF53720 1 474 7.98E-173 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_09125 a13b113439e3307649e2d13f3c1251ef 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_09125 a13b113439e3307649e2d13f3c1251ef 485 PIRSF PIRSF036492 24 482 2.2E-83 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 UP17_09125 a13b113439e3307649e2d13f3c1251ef 485 Gene3D G3DSA:3.40.309.10 248 441 3.0E-188 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_09125 a13b113439e3307649e2d13f3c1251ef 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_09125 a13b113439e3307649e2d13f3c1251ef 485 Gene3D G3DSA:3.40.605.10 3 469 3.0E-188 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_09125 a13b113439e3307649e2d13f3c1251ef 485 Pfam PF00171 Aldehyde dehydrogenase family 7 471 1.9E-180 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_08290 7f7a516322ea2256a231f4b1cc183dd2 115 SUPERFAMILY SSF46973 1 101 4.18E-36 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 UP17_08290 7f7a516322ea2256a231f4b1cc183dd2 115 Gene3D G3DSA:1.20.58.80 1 103 4.2E-37 T 11-10-2018 UP17_08290 7f7a516322ea2256a231f4b1cc183dd2 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 9 100 6.5E-36 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 UP17_08290 7f7a516322ea2256a231f4b1cc183dd2 115 PIRSF PIRSF000699 1 107 1.4E-37 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 Gene3D G3DSA:3.90.230.10 1 248 4.9E-108 T 11-10-2018 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 Pfam PF00557 Metallopeptidase family M24 12 239 6.4E-54 T 11-10-2018 IPR000994 Peptidase M24 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 SUPERFAMILY SSF55920 1 246 2.88E-86 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 39.82 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_11785 87c3562015250abb5cc0bead6ba7940d 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 4.3E-95 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 Gene3D G3DSA:3.30.300.310 406 507 5.9E-36 T 11-10-2018 UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 PRINTS PR00154 AMP-binding signature 172 180 4.6E-5 T 11-10-2018 IPR020459 AMP-binding UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 PRINTS PR00154 AMP-binding signature 160 171 4.6E-5 T 11-10-2018 IPR020459 AMP-binding UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 Gene3D G3DSA:3.40.50.12780 1 403 2.2E-133 T 11-10-2018 UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 493 7.6E-20 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 Pfam PF00501 AMP-binding enzyme 10 410 4.3E-121 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_10150 94f0ec8165a8e61508193f3e366ca295 508 SUPERFAMILY SSF56801 7 502 3.53E-165 T 11-10-2018 UP17_07530 c8c36b87a50600558e4699b645cabf7b 249 Pfam PF13672 Protein phosphatase 2C 12 210 7.4E-15 T 11-10-2018 UP17_07530 c8c36b87a50600558e4699b645cabf7b 249 Gene3D G3DSA:3.60.40.10 1 246 1.5E-72 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_07530 c8c36b87a50600558e4699b645cabf7b 249 SMART SM00331 7 242 4.4E-52 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_07530 c8c36b87a50600558e4699b645cabf7b 249 SUPERFAMILY SSF81606 2 242 6.54E-66 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_07530 c8c36b87a50600558e4699b645cabf7b 249 SMART SM00332 1 240 1.3E-28 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 283 39.126 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 Gene3D G3DSA:1.10.8.10 2 83 6.9E-19 T 11-10-2018 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 Gene3D G3DSA:3.40.50.150 84 283 6.1E-56 T 11-10-2018 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 Pfam PF05175 Methyltransferase small domain 114 197 4.3E-12 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 283 1.5E-72 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 279 1.2E-80 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 UP17_24240 295366ecf286e660d125f9e4a280e2be 284 SUPERFAMILY SSF53335 3 279 1.17E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 Gene3D G3DSA:3.40.640.10 155 374 5.7E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 SUPERFAMILY SSF53383 109 480 3.27E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 SUPERFAMILY SSF46785 8 83 1.22E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 Gene3D G3DSA:1.10.10.10 4 79 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 Gene3D G3DSA:3.90.1150.10 118 478 5.7E-97 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 SMART SM00345 19 78 4.4E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 Pfam PF00155 Aminotransferase class I and II 122 472 1.1E-28 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_23965 6ad4901fffcfbacbeb15b8db90933dae 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 2.6E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12845 229bc47afcb4beee6773c712a5f57b42 173 Hamap MF_01515 UPF0316 protein . 1 169 27.717 T 11-10-2018 IPR022930 Protein of unknown function UPF0316 UP17_12845 229bc47afcb4beee6773c712a5f57b42 173 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 109 161 8.2E-8 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 UP17_09210 c0eda473163ff17d2187e4ffbf24932c 194 Pfam PF07336 Putative stress-induced transcription regulator 12 95 3.2E-6 T 11-10-2018 IPR010852 Putative stress-induced transcription regulator UP17_09210 c0eda473163ff17d2187e4ffbf24932c 194 SUPERFAMILY SSF160904 5 189 2.88E-31 T 11-10-2018 UP17_09210 c0eda473163ff17d2187e4ffbf24932c 194 Pfam PF11706 CGNR zinc finger 150 190 9.5E-16 T 11-10-2018 IPR021005 Zinc finger, CGNR UP17_09210 c0eda473163ff17d2187e4ffbf24932c 194 Gene3D G3DSA:1.10.3300.10 4 191 2.4E-15 T 11-10-2018 IPR023286 ABATE domain superfamily UP17_19395 54b3a9340224c1771bb227508ab6548c 204 SUPERFAMILY SSF46689 9 79 1.64E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19395 54b3a9340224c1771bb227508ab6548c 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_19395 54b3a9340224c1771bb227508ab6548c 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_19395 54b3a9340224c1771bb227508ab6548c 204 SUPERFAMILY SSF48498 94 203 1.93E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_19395 54b3a9340224c1771bb227508ab6548c 204 Gene3D G3DSA:1.10.357.10 63 204 7.4E-22 T 11-10-2018 UP17_19395 54b3a9340224c1771bb227508ab6548c 204 Gene3D G3DSA:1.10.10.60 16 62 5.7E-14 T 11-10-2018 UP17_19395 54b3a9340224c1771bb227508ab6548c 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 2.0E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_17535 04bed348bf618886f93f7691ba03baba 288 Pfam PF02163 Peptidase family M50 33 103 9.8E-8 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 UP17_18470 b6f0bdf71670b07419ebcf3a5c1715d4 108 Gene3D G3DSA:3.40.30.10 1 107 1.5E-36 T 11-10-2018 UP17_18470 b6f0bdf71670b07419ebcf3a5c1715d4 108 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 5 103 1.8E-35 T 11-10-2018 IPR022551 Protein of unknown function DUF2847 UP17_18470 b6f0bdf71670b07419ebcf3a5c1715d4 108 SUPERFAMILY SSF52833 2 105 1.68E-6 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_18470 b6f0bdf71670b07419ebcf3a5c1715d4 108 Pfam PF11009 Protein of unknown function (DUF2847) 5 102 1.7E-34 T 11-10-2018 IPR022551 Protein of unknown function DUF2847 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 SUPERFAMILY SSF55979 254 377 2.25E-29 T 11-10-2018 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 SUPERFAMILY SSF55979 1 127 1.22E-23 T 11-10-2018 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 Gene3D G3DSA:3.10.150.10 1 250 5.7E-135 T 11-10-2018 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 Gene3D G3DSA:3.70.10.10 145 375 5.7E-135 T 11-10-2018 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 2.9E-34 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 SMART SM00480 17 373 6.6E-160 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 6.7E-38 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 5.5E-122 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 SUPERFAMILY SSF55979 133 251 7.18E-29 T 11-10-2018 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 2.7E-39 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 UP17_00010 a2480bd6cbd9359bbe8d9f114f0f8fb6 378 PIRSF PIRSF000804 1 378 1.9E-116 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 Gene3D G3DSA:2.40.50.140 284 345 3.1E-10 T 11-10-2018 UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 Pfam PF00005 ABC transporter 19 161 1.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 SUPERFAMILY SSF52540 4 242 3.5E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 SUPERFAMILY SSF50331 257 352 1.25E-6 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 Gene3D G3DSA:2.40.50.940 222 352 3.1E-10 T 11-10-2018 UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 Pfam PF08402 TOBE domain 278 352 2.6E-9 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 Gene3D G3DSA:3.40.50.300 4 221 5.4E-63 T 11-10-2018 UP17_20530 4a9b0e8268f45ce3a73f5b1faa91a88c 354 SMART SM00382 28 217 7.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 SMART SM00382 28 211 3.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 SUPERFAMILY SSF50331 236 360 2.51E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 Gene3D G3DSA:2.40.50.140 289 355 2.8E-5 T 11-10-2018 UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 Gene3D G3DSA:3.40.50.300 1 237 2.7E-75 T 11-10-2018 UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 Pfam PF00005 ABC transporter 20 161 1.3E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 Gene3D G3DSA:2.40.50.100 247 288 2.8E-5 T 11-10-2018 UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 Pfam PF08402 TOBE domain 286 360 1.6E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 UP17_03390 784c2829713c63da921bd7bfa6fbe9b6 370 SUPERFAMILY SSF52540 4 243 4.9E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 Pfam PF00155 Aminotransferase class I and II 117 455 1.0E-14 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 SUPERFAMILY SSF53383 94 460 2.82E-70 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 Gene3D G3DSA:3.40.640.10 92 456 3.4E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 SMART SM00345 20 79 6.8E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 Gene3D G3DSA:1.10.10.10 4 88 1.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 1.6E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 1.6E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 1.4E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12995 cad0b43f9398a32311f41403c6a0d776 464 SUPERFAMILY SSF46785 9 88 3.12E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 1.7E-8 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 284 310 2.0E-5 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 319 352 2.9E-7 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 42.435 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 Gene3D G3DSA:2.160.10.10 253 439 1.0E-55 T 11-10-2018 UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 Pfam PF00483 Nucleotidyl transferase 6 221 3.6E-25 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 SUPERFAMILY SSF53448 4 307 1.31E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 Gene3D G3DSA:3.90.550.10 1 252 1.6E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 453 1.9E-189 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 UP17_00290 70efcf7f40ecd359b7f735147ee5e1df 457 SUPERFAMILY SSF51161 249 446 1.89E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_22970 30a32f4aa9761d874c7d867badc9fa8d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 129 147 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22970 30a32f4aa9761d874c7d867badc9fa8d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 187 200 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22970 30a32f4aa9761d874c7d867badc9fa8d 420 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 61 74 2.1E-6 T 11-10-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 UP17_22970 30a32f4aa9761d874c7d867badc9fa8d 420 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 10 354 3.4E-132 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_22970 30a32f4aa9761d874c7d867badc9fa8d 420 SUPERFAMILY SSF56672 5 347 1.59E-58 T 11-10-2018 UP17_22970 30a32f4aa9761d874c7d867badc9fa8d 420 Pfam PF08388 Group II intron, maturase-specific domain 289 359 1.9E-18 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_22970 30a32f4aa9761d874c7d867badc9fa8d 420 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 66 272 9.0E-47 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_13360 254a6720a2cd2128013c64f84ef1933f 363 Gene3D G3DSA:3.40.50.2000 3 185 1.2E-106 T 11-10-2018 UP17_13360 254a6720a2cd2128013c64f84ef1933f 363 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 356 1.0E-89 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 UP17_13360 254a6720a2cd2128013c64f84ef1933f 363 Gene3D G3DSA:3.40.50.2000 186 327 1.2E-106 T 11-10-2018 UP17_13360 254a6720a2cd2128013c64f84ef1933f 363 SUPERFAMILY SSF53756 2 358 2.95E-100 T 11-10-2018 UP17_13360 254a6720a2cd2128013c64f84ef1933f 363 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 336 2.3E-88 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 UP17_07660 ce39b25ea346ce8e560bd31785dcf572 244 Gene3D G3DSA:1.10.1270.20 165 244 1.7E-31 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UP17_07660 ce39b25ea346ce8e560bd31785dcf572 244 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 244 111.65 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UP17_07660 ce39b25ea346ce8e560bd31785dcf572 244 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 230 7.1E-102 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UP17_07660 ce39b25ea346ce8e560bd31785dcf572 244 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 8.1E-71 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UP17_07660 ce39b25ea346ce8e560bd31785dcf572 244 PIRSF PIRSF000386 1 244 8.2E-103 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 UP17_07660 ce39b25ea346ce8e560bd31785dcf572 244 SUPERFAMILY SSF75217 1 243 5.76E-102 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases UP17_07660 ce39b25ea346ce8e560bd31785dcf572 244 Gene3D G3DSA:3.40.1280.10 1 164 3.0E-69 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UP17_03430 99b78e6c89dd6242a4aa3681ffcff345 462 Pfam PF00324 Amino acid permease 14 424 1.5E-101 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_03430 99b78e6c89dd6242a4aa3681ffcff345 462 PIRSF PIRSF006060 1 461 8.9E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_03430 99b78e6c89dd6242a4aa3681ffcff345 462 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_03430 99b78e6c89dd6242a4aa3681ffcff345 462 Gene3D G3DSA:1.20.1740.10 5 457 1.7E-58 T 11-10-2018 UP17_12490 44fdd5b012ee565407af2e1af6226d71 263 Pfam PF01636 Phosphotransferase enzyme family 107 175 4.9E-12 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase UP17_12490 44fdd5b012ee565407af2e1af6226d71 263 SUPERFAMILY SSF56112 3 216 1.81E-24 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_12490 44fdd5b012ee565407af2e1af6226d71 263 Gene3D G3DSA:3.90.1200.10 63 216 2.1E-10 T 11-10-2018 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.537 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 Gene3D G3DSA:1.10.1050.10 6 200 7.4E-77 T 11-10-2018 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 SMART SM00363 92 155 1.5E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 SUPERFAMILY SSF55174 2 200 3.79E-71 T 11-10-2018 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 SMART SM01390 3 91 7.1E-48 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 Pfam PF01479 S4 domain 93 139 1.4E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 1.8E-30 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 Gene3D G3DSA:3.10.290.10 91 185 7.4E-77 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_18425 dc464bafb9969e6e2317e3120e3d2078 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 1.1E-85 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 UP17_07205 d963e35a063f4bc06b87a516b6b57730 405 Pfam PF07670 Nucleoside recognition 43 141 6.3E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 UP17_07205 d963e35a063f4bc06b87a516b6b57730 405 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 9 354 3.0E-119 T 11-10-2018 IPR014226 Sporulation integral membrane protein YlbJ UP17_17000 dbb41b9be4975541c3d5b37de410bf5a 96 Pfam PF06949 Protein of unknown function (DUF1292) 13 89 7.0E-18 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 UP17_17000 dbb41b9be4975541c3d5b37de410bf5a 96 Hamap MF_01448 UPF0473 protein . 4 90 21.72 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 UP17_25680 f60a2067f6ad2f2a589ecfa24727f128 656 Gene3D G3DSA:1.10.8.730 320 460 3.7E-67 T 11-10-2018 UP17_25680 f60a2067f6ad2f2a589ecfa24727f128 656 SUPERFAMILY SSF52540 241 609 4.15E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_25680 f60a2067f6ad2f2a589ecfa24727f128 656 Pfam PF01935 Domain of unknown function DUF87 254 396 5.6E-10 T 11-10-2018 IPR002789 Helicase HerA, central domain UP17_25680 f60a2067f6ad2f2a589ecfa24727f128 656 Gene3D G3DSA:3.40.50.300 248 607 3.7E-67 T 11-10-2018 UP17_12540 ad56ada744534411ab62e68a9050a0df 318 Pfam PF01734 Patatin-like phospholipase 8 177 5.5E-13 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 UP17_12540 ad56ada744534411ab62e68a9050a0df 318 Gene3D G3DSA:3.40.1090.10 2 236 2.3E-26 T 11-10-2018 UP17_12540 ad56ada744534411ab62e68a9050a0df 318 SUPERFAMILY SSF52151 3 293 2.88E-26 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase UP17_23170 15deba90e647bbc22a51cc703a354cb5 102 Gene3D G3DSA:3.40.30.10 4 101 5.9E-13 T 11-10-2018 UP17_23170 15deba90e647bbc22a51cc703a354cb5 102 Pfam PF00085 Thioredoxin 9 85 2.4E-9 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 UP17_23170 15deba90e647bbc22a51cc703a354cb5 102 SUPERFAMILY SSF52833 6 100 5.78E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_21150 82695292e767cb5ad70f3068dd180473 110 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 104 4.7E-18 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 UP17_21150 82695292e767cb5ad70f3068dd180473 110 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 90 1.4E-14 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 UP17_21150 82695292e767cb5ad70f3068dd180473 110 Gene3D G3DSA:1.20.1290.10 4 110 3.8E-29 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 UP17_21150 82695292e767cb5ad70f3068dd180473 110 SUPERFAMILY SSF69118 12 108 9.03E-25 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 UP17_14325 60a88d7fb9fd540729631c02b40d8d8c 194 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 5 188 1.4E-61 T 11-10-2018 IPR018672 Protein of unknown function DUF2140 UP17_15700 0045d578610754ef93a44905c19061d2 114 SUPERFAMILY SSF55729 7 95 6.2E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_15700 0045d578610754ef93a44905c19061d2 114 Gene3D G3DSA:3.40.630.30 3 107 6.5E-13 T 11-10-2018 UP17_15700 0045d578610754ef93a44905c19061d2 114 Pfam PF00583 Acetyltransferase (GNAT) family 34 98 4.3E-8 T 11-10-2018 IPR000182 GNAT domain UP17_20250 d4cc78ec213200710175776495c660e3 145 Pfam PF06480 FtsH Extracellular 9 105 5.8E-6 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 ProSitePatterns PS00146 Beta-lactamase class-A active site. 90 105 - T 11-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 Gene3D G3DSA:3.40.710.10 42 310 6.3E-74 T 11-10-2018 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 PRINTS PR00118 Beta-lactamase class A signature 190 215 8.3E-63 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 PRINTS PR00118 Beta-lactamase class A signature 57 81 8.3E-63 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 PRINTS PR00118 Beta-lactamase class A signature 226 241 8.3E-63 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 PRINTS PR00118 Beta-lactamase class A signature 164 188 8.3E-63 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 PRINTS PR00118 Beta-lactamase class A signature 88 105 8.3E-63 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 PRINTS PR00118 Beta-lactamase class A signature 243 258 8.3E-63 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 PRINTS PR00118 Beta-lactamase class A signature 128 153 8.3E-63 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 Pfam PF13354 Beta-lactamase enzyme family 78 283 2.8E-33 T 11-10-2018 UP17_21255 88d0f7446c8350be7b56cccb2a3cf219 314 SUPERFAMILY SSF56601 55 309 4.36E-71 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_07495 df512a127d56ec5bda4a7256feda44c2 68 SMART SM01409 8 61 3.5E-13 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 UP17_07495 df512a127d56ec5bda4a7256feda44c2 68 SUPERFAMILY SSF63562 1 66 6.98E-21 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 UP17_07495 df512a127d56ec5bda4a7256feda44c2 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 14.053 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_07495 df512a127d56ec5bda4a7256feda44c2 68 Gene3D G3DSA:3.90.940.10 1 68 1.3E-17 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 UP17_07495 df512a127d56ec5bda4a7256feda44c2 68 Pfam PF01192 RNA polymerase Rpb6 9 61 2.8E-13 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 UP17_07495 df512a127d56ec5bda4a7256feda44c2 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.8E-20 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_16235 ebfa4055d49df22af0e0ebba89b63d49 265 ProDom PD123329 YQHG BH2818 1 259 2.0E-90 T 11-10-2018 IPR024562 Uncharacterised protein family YqhG UP17_16235 ebfa4055d49df22af0e0ebba89b63d49 265 Pfam PF11079 Bacterial protein YqhG of unknown function 1 259 1.8E-120 T 11-10-2018 IPR024562 Uncharacterised protein family YqhG UP17_16435 f00f07820fdb4a8e2c35e57ea1e22e13 451 Pfam PF13751 Transposase DDE domain 324 440 8.1E-26 T 11-10-2018 IPR025668 Transposase DDE domain UP17_16435 f00f07820fdb4a8e2c35e57ea1e22e13 451 Pfam PF05598 Transposase domain (DUF772) 52 127 3.5E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 Gene3D G3DSA:3.40.50.720 1 181 1.5E-77 T 11-10-2018 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 44.83 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 SUPERFAMILY SSF51735 3 182 1.44E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 1.8E-66 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 177 1.3E-77 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 SUPERFAMILY SSF48179 183 330 3.06E-70 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 2.1E-145 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 PIRSF PIRSF000116 1 206 7.2E-43 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 PIRSF PIRSF000116 202 332 5.0E-15 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 UP17_17730 99473b7eed509892cdb323f6a3457cd0 342 Gene3D G3DSA:1.10.3730.40 182 338 1.0E-69 T 11-10-2018 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 Gene3D G3DSA:1.20.1250.20 2 378 7.3E-82 T 11-10-2018 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 Pfam PF07690 Major Facilitator Superfamily 10 269 3.2E-51 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 PRINTS PR01035 Tetracycline resistance protein signature 73 97 3.4E-33 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 PRINTS PR01035 Tetracycline resistance protein signature 330 353 3.4E-33 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 PRINTS PR01035 Tetracycline resistance protein signature 270 291 3.4E-33 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 PRINTS PR01035 Tetracycline resistance protein signature 242 262 3.4E-33 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 PRINTS PR01035 Tetracycline resistance protein signature 16 32 3.4E-33 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 PRINTS PR01035 Tetracycline resistance protein signature 131 153 3.4E-33 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 PRINTS PR01035 Tetracycline resistance protein signature 159 179 3.4E-33 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_03585 0eab3e4b9d23cf1212d8b2fad0413134 391 SUPERFAMILY SSF103473 4 384 2.88E-74 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_11925 95d29d1808031663f626380464de2ded 330 SUPERFAMILY SSF52518 7 329 1.7E-100 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_11925 95d29d1808031663f626380464de2ded 330 Pfam PF00676 Dehydrogenase E1 component 22 318 1.7E-94 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 UP17_11925 95d29d1808031663f626380464de2ded 330 Gene3D G3DSA:3.40.50.970 2 330 5.8E-122 T 11-10-2018 UP17_01030 59b7f790ccfdd66249031076daede5be 389 Gene3D G3DSA:3.30.470.20 83 364 2.1E-30 T 11-10-2018 UP17_01030 59b7f790ccfdd66249031076daede5be 389 SUPERFAMILY SSF56059 117 291 2.05E-23 T 11-10-2018 UP17_01030 59b7f790ccfdd66249031076daede5be 389 Pfam PF13535 ATP-grasp domain 119 277 1.8E-51 T 11-10-2018 UP17_06800 587777080f5ef4645a168b06dc499d3e 261 Gene3D G3DSA:3.40.50.720 1 260 1.8E-71 T 11-10-2018 UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.6E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 257 3.5E-53 T 11-10-2018 UP17_06800 587777080f5ef4645a168b06dc499d3e 261 SUPERFAMILY SSF51735 6 257 1.77E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_06800 587777080f5ef4645a168b06dc499d3e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 SUPERFAMILY SSF53901 4 266 4.49E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 PIRSF PIRSF000429 1 394 3.1E-126 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 7.7E-51 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 Gene3D G3DSA:3.40.47.10 6 277 8.0E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 Pfam PF00108 Thiolase, N-terminal domain 4 263 2.3E-88 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 Gene3D G3DSA:3.40.47.10 127 391 8.0E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 392 4.0E-138 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_10255 cbc61d67fb9d8ec196fe8b67d6683cdc 394 SUPERFAMILY SSF53901 272 392 4.5E-46 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 1.9E-95 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 PIRSF PIRSF036692 1 220 6.7E-105 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 Pfam PF03315 Serine dehydratase beta chain 5 72 3.5E-11 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 SUPERFAMILY SSF55021 137 218 1.44E-17 T 11-10-2018 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 Gene3D G3DSA:3.30.70.260 139 217 6.7E-16 T 11-10-2018 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 Gene3D G3DSA:3.30.1330.90 13 135 1.5E-22 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 SUPERFAMILY SSF143548 19 137 1.15E-31 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_07575 1e128ad3129211157e1fdda782a489d5 220 Pfam PF01842 ACT domain 149 210 1.1E-10 T 11-10-2018 IPR002912 ACT domain UP17_09930 40f7c70ae2bc15798b021c632fb9f774 186 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 85 96 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_09930 40f7c70ae2bc15798b021c632fb9f774 186 Pfam PF13247 4Fe-4S dicluster domain 47 137 1.1E-20 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_09930 40f7c70ae2bc15798b021c632fb9f774 186 Gene3D G3DSA:3.30.70.20 28 176 7.3E-32 T 11-10-2018 UP17_09930 40f7c70ae2bc15798b021c632fb9f774 186 SUPERFAMILY SSF54862 3 156 1.78E-38 T 11-10-2018 UP17_19355 2be38dd9189e9d4aba70291b78b61806 296 Pfam PF01381 Helix-turn-helix 13 65 4.8E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19355 2be38dd9189e9d4aba70291b78b61806 296 SUPERFAMILY SSF48452 157 276 2.51E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_19355 2be38dd9189e9d4aba70291b78b61806 296 Gene3D G3DSA:1.25.40.10 7 296 2.1E-73 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_19355 2be38dd9189e9d4aba70291b78b61806 296 SMART SM00530 12 66 7.1E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19355 2be38dd9189e9d4aba70291b78b61806 296 SUPERFAMILY SSF47413 4 69 6.19E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_01200 8d63e160a4b6ecca7ef99f122b38a3e0 504 Gene3D G3DSA:1.20.1250.20 261 501 5.5E-19 T 11-10-2018 UP17_01200 8d63e160a4b6ecca7ef99f122b38a3e0 504 Gene3D G3DSA:1.20.1720.10 11 217 3.6E-55 T 11-10-2018 UP17_01200 8d63e160a4b6ecca7ef99f122b38a3e0 504 Pfam PF07690 Major Facilitator Superfamily 14 404 3.7E-54 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_01200 8d63e160a4b6ecca7ef99f122b38a3e0 504 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 486 3.3E-83 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_01200 8d63e160a4b6ecca7ef99f122b38a3e0 504 SUPERFAMILY SSF103473 4 491 1.74E-75 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_24880 ded335d246f0eea618e83ef634c8ecb6 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 1.3E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_24880 ded335d246f0eea618e83ef634c8ecb6 264 SUPERFAMILY SSF56281 3 237 7.08E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_24880 ded335d246f0eea618e83ef634c8ecb6 264 SMART SM00849 13 191 1.5E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_24880 ded335d246f0eea618e83ef634c8ecb6 264 Gene3D G3DSA:3.60.15.10 8 249 9.2E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_00800 c23e944e6946a416af836417159bb0b2 72 SMART SM00316 4 72 1.2E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_00800 c23e944e6946a416af836417159bb0b2 72 SUPERFAMILY SSF50249 1 71 1.0E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_00800 c23e944e6946a416af836417159bb0b2 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.162 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 UP17_00800 c23e944e6946a416af836417159bb0b2 72 Gene3D G3DSA:2.40.50.140 1 72 3.3E-38 T 11-10-2018 UP17_00800 c23e944e6946a416af836417159bb0b2 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.0E-39 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 UP17_00800 c23e944e6946a416af836417159bb0b2 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.6E-29 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 196 1.8E-74 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 SUPERFAMILY SSF63380 92 194 9.35E-29 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 Gene3D G3DSA:2.40.30.20 1 88 1.1E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 Gene3D G3DSA:2.40.30.20 101 200 6.7E-29 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 Pfam PF00677 Lumazine binding domain 3 86 8.2E-23 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 Pfam PF00677 Lumazine binding domain 99 183 6.0E-19 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 SUPERFAMILY SSF63380 1 89 6.63E-26 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel UP17_02635 7dc93d1799a178b9953f0a5fc4d8ee40 212 PIRSF PIRSF000498 1 205 6.0E-74 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 Gene3D G3DSA:1.10.1740.10 1 72 3.4E-25 T 11-10-2018 UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 SUPERFAMILY SSF88946 5 78 1.57E-23 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 Pfam PF08281 Sigma-70, region 4 110 161 2.2E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 165 9.7E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 SUPERFAMILY SSF88659 88 168 1.87E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 31 62 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 Gene3D G3DSA:1.10.10.10 92 169 1.4E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15610 b6897c67beb8ae778f91b1b503c76ef3 187 Pfam PF04542 Sigma-70 region 2 9 75 9.3E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_19725 f62d9dc57181e1d6f13ca934a31c72b8 461 Pfam PF02447 GntP family permease 4 315 4.7E-13 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 Gene3D G3DSA:1.10.940.10 2 144 1.5E-39 T 11-10-2018 IPR035926 NusB-like superfamily UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 430 447 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 376 392 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 243 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 258 268 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 326 338 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 325 336 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 248 446 2.8E-60 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 Gene3D G3DSA:3.40.50.150 147 447 7.2E-82 T 11-10-2018 UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 SUPERFAMILY SSF48013 4 132 2.09E-35 T 11-10-2018 IPR035926 NusB-like superfamily UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 9 448 4.3E-146 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 SUPERFAMILY SSF53335 140 448 5.68E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_07520 7a4e8a7a44cf43a7ca1e8a440fcce018 450 Pfam PF01029 NusB family 8 130 8.3E-30 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 Gene3D G3DSA:3.90.930.12 83 178 7.4E-40 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.0E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.0E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.0E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 39.538 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 SUPERFAMILY SSF56053 83 177 3.74E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 Gene3D G3DSA:3.90.930.12 1 82 9.6E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 PIRSF PIRSF002162 1 177 1.9E-50 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 Pfam PF00347 Ribosomal protein L6 11 82 1.9E-23 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 Pfam PF00347 Ribosomal protein L6 90 164 7.6E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 SUPERFAMILY SSF56053 1 82 2.47E-29 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00765 1f9121abdf47f79f345e958cfa07649b 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.8E-77 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 UP17_24825 a6631d33eea291d65f210ec4a4e00ec1 600 Pfam PF04183 IucA / IucC family 145 381 3.5E-56 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 UP17_24825 a6631d33eea291d65f210ec4a4e00ec1 600 Gene3D G3DSA:1.10.510.40 371 579 4.1E-13 T 11-10-2018 UP17_24825 a6631d33eea291d65f210ec4a4e00ec1 600 Pfam PF06276 Ferric iron reductase FhuF-like transporter 412 573 4.8E-38 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 383 408 - T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 Gene3D G3DSA:3.20.20.240 40 556 6.8E-238 T 11-10-2018 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 593 721 1.3E-59 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 Pfam PF02310 B12 binding domain 596 706 5.5E-14 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 SUPERFAMILY SSF52242 560 723 1.11E-56 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 SUPERFAMILY SSF51703 19 556 2.28E-219 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 40 561 6.9E-267 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 Pfam PF01642 Methylmalonyl-CoA mutase 41 554 1.5E-234 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_15980 c326d258fcb4fba063fa983b462b27e3 730 Gene3D G3DSA:3.40.50.280 560 723 7.1E-55 T 11-10-2018 UP17_03480 0b30a624aae845890fc767279d97182a 238 SMART SM00382 26 204 1.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_03480 0b30a624aae845890fc767279d97182a 238 SUPERFAMILY SSF52540 2 219 4.66E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03480 0b30a624aae845890fc767279d97182a 238 Gene3D G3DSA:3.40.50.300 1 232 2.7E-48 T 11-10-2018 UP17_03480 0b30a624aae845890fc767279d97182a 238 Pfam PF00005 ABC transporter 17 157 4.3E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_15200 8d25e72dd67d5016a2f752433296f215 289 Pfam PF03466 LysR substrate binding domain 87 287 3.6E-35 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_15200 8d25e72dd67d5016a2f752433296f215 289 Gene3D G3DSA:1.10.10.10 1 91 8.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15200 8d25e72dd67d5016a2f752433296f215 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.0E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_15200 8d25e72dd67d5016a2f752433296f215 289 SUPERFAMILY SSF53850 88 287 1.37E-32 T 11-10-2018 UP17_15200 8d25e72dd67d5016a2f752433296f215 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_15200 8d25e72dd67d5016a2f752433296f215 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_15200 8d25e72dd67d5016a2f752433296f215 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_15200 8d25e72dd67d5016a2f752433296f215 289 Gene3D G3DSA:3.40.190.290 92 289 1.5E-41 T 11-10-2018 UP17_15200 8d25e72dd67d5016a2f752433296f215 289 SUPERFAMILY SSF46785 1 86 1.06E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_24125 8298153d2014864fe86e11f875ff4f15 349 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 230 343 6.5E-37 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24125 8298153d2014864fe86e11f875ff4f15 349 Gene3D G3DSA:3.30.460.80 179 326 1.1E-33 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24125 8298153d2014864fe86e11f875ff4f15 349 SUPERFAMILY SSF143243 219 347 1.31E-40 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24125 8298153d2014864fe86e11f875ff4f15 349 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 229 343 9.4E-38 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24125 8298153d2014864fe86e11f875ff4f15 349 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 280 335 3.0E-15 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_20470 3a71a405eeb56573dea919599e9ec781 88 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 83 2.7E-13 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 UP17_20470 3a71a405eeb56573dea919599e9ec781 88 SUPERFAMILY SSF52794 1 84 4.45E-18 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_20470 3a71a405eeb56573dea919599e9ec781 88 Gene3D G3DSA:3.40.50.2300 1 88 5.6E-19 T 11-10-2018 UP17_20830 7364e13e9a70182ad259e706bd2b2bad 310 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_20830 7364e13e9a70182ad259e706bd2b2bad 310 Gene3D G3DSA:3.40.50.300 1 239 1.6E-58 T 11-10-2018 UP17_20830 7364e13e9a70182ad259e706bd2b2bad 310 SUPERFAMILY SSF52540 3 216 3.09E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20830 7364e13e9a70182ad259e706bd2b2bad 310 Pfam PF00005 ABC transporter 21 163 1.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_20830 7364e13e9a70182ad259e706bd2b2bad 310 SMART SM00382 30 211 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_16845 5f0fafaa69699d9709c79e508557f319 247 SUPERFAMILY SSF53335 3 247 2.39E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_16845 5f0fafaa69699d9709c79e508557f319 247 Pfam PF13649 Methyltransferase domain 40 135 1.0E-19 T 11-10-2018 UP17_16845 5f0fafaa69699d9709c79e508557f319 247 Gene3D G3DSA:3.40.50.150 5 245 9.9E-85 T 11-10-2018 UP17_16845 5f0fafaa69699d9709c79e508557f319 247 Gene3D G3DSA:2.20.25.110 143 206 9.9E-85 T 11-10-2018 UP17_03685 05295c7647456b4b864329877cb2c87d 462 Gene3D G3DSA:1.10.630.10 7 457 1.2E-130 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00385 P450 superfamily signature 389 398 1.0E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00385 P450 superfamily signature 398 409 1.0E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00385 P450 superfamily signature 314 325 1.0E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00385 P450 superfamily signature 262 279 1.0E-13 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00463 E-class P450 group I signature 38 57 1.9E-31 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00463 E-class P450 group I signature 388 398 1.9E-31 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00463 E-class P450 group I signature 353 377 1.9E-31 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00463 E-class P450 group I signature 398 421 1.9E-31 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00463 E-class P450 group I signature 271 297 1.9E-31 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 PRINTS PR00463 E-class P450 group I signature 251 268 1.9E-31 T 11-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 SUPERFAMILY SSF48264 9 452 2.1E-119 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 391 400 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 UP17_03685 05295c7647456b4b864329877cb2c87d 462 Pfam PF00067 Cytochrome P450 11 442 1.1E-96 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 UP17_24860 bde6aa9cde2c122745a13d64eaf54596 110 Gene3D G3DSA:3.30.70.100 1 107 2.0E-31 T 11-10-2018 UP17_24860 bde6aa9cde2c122745a13d64eaf54596 110 SUPERFAMILY SSF54909 1 103 6.9E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_24860 bde6aa9cde2c122745a13d64eaf54596 110 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 4.6E-11 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain UP17_14555 bc80f03b9d9896ab9a2f2354d8f86046 89 SUPERFAMILY SSF56672 22 79 6.89E-6 T 11-10-2018 UP17_14555 bc80f03b9d9896ab9a2f2354d8f86046 89 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 22 80 3.0E-8 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_00730 8d83255c25c933f6afb4339a772ab961 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.78 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00730 8d83255c25c933f6afb4339a772ab961 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00730 8d83255c25c933f6afb4339a772ab961 67 SUPERFAMILY SSF46561 1 63 2.88E-24 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00730 8d83255c25c933f6afb4339a772ab961 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 9.4E-24 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00730 8d83255c25c933f6afb4339a772ab961 67 Pfam PF00831 Ribosomal L29 protein 4 60 3.8E-26 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00730 8d83255c25c933f6afb4339a772ab961 67 Gene3D G3DSA:1.10.287.310 1 66 1.7E-30 T 11-10-2018 UP17_24445 1d87d68434886cb7e02e48935369988c 226 SUPERFAMILY SSF52141 5 222 2.4E-93 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_24445 1d87d68434886cb7e02e48935369988c 226 Gene3D G3DSA:3.40.470.10 1 226 2.3E-97 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_24445 1d87d68434886cb7e02e48935369988c 226 SMART SM00987 51 211 9.7E-36 T 11-10-2018 UP17_24445 1d87d68434886cb7e02e48935369988c 226 SMART SM00986 51 211 9.7E-36 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_24445 1d87d68434886cb7e02e48935369988c 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 7 222 40.991 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_24445 1d87d68434886cb7e02e48935369988c 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 8 215 8.3E-83 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_24445 1d87d68434886cb7e02e48935369988c 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 59 68 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_24445 1d87d68434886cb7e02e48935369988c 226 Pfam PF03167 Uracil DNA glycosylase superfamily 55 210 3.4E-23 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_20745 2361af90203d6aca051409d605211c6e 143 SMART SM00344 1 105 2.2E-33 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_20745 2361af90203d6aca051409d605211c6e 143 SUPERFAMILY SSF46785 1 59 5.54E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20745 2361af90203d6aca051409d605211c6e 143 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 1.4E-14 T 11-10-2018 UP17_20745 2361af90203d6aca051409d605211c6e 143 Pfam PF01037 Lrp/AsnC ligand binding domain 74 128 8.1E-10 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain UP17_20745 2361af90203d6aca051409d605211c6e 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 9.1E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20745 2361af90203d6aca051409d605211c6e 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 9.1E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20745 2361af90203d6aca051409d605211c6e 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 9.1E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20745 2361af90203d6aca051409d605211c6e 143 Gene3D G3DSA:3.30.70.920 53 137 1.6E-17 T 11-10-2018 UP17_20745 2361af90203d6aca051409d605211c6e 143 SUPERFAMILY SSF54909 65 132 3.49E-13 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_20745 2361af90203d6aca051409d605211c6e 143 Gene3D G3DSA:1.10.10.10 1 52 5.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04530 896b14ddd75665044c56e793af0a2c4e 181 Gene3D G3DSA:3.40.50.360 1 181 2.5E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_04530 896b14ddd75665044c56e793af0a2c4e 181 SUPERFAMILY SSF52218 1 177 4.69E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_04530 896b14ddd75665044c56e793af0a2c4e 181 Pfam PF03358 NADPH-dependent FMN reductase 1 145 3.5E-35 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 UP17_00065 6438f7332894bc7f6da24a86952dae5a 321 Pfam PF14175 YaaC-like Protein 11 311 1.4E-95 T 11-10-2018 IPR026988 YaaC-like protein UP17_18440 3ffb4cf8324ac9900139a4009ffafb2c 572 Pfam PF00501 AMP-binding enzyme 50 461 1.0E-92 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_18440 3ffb4cf8324ac9900139a4009ffafb2c 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 2.4E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_18440 3ffb4cf8324ac9900139a4009ffafb2c 572 SUPERFAMILY SSF56801 11 562 4.06E-161 T 11-10-2018 UP17_18440 3ffb4cf8324ac9900139a4009ffafb2c 572 Gene3D G3DSA:3.30.300.30 458 569 1.1E-27 T 11-10-2018 UP17_18440 3ffb4cf8324ac9900139a4009ffafb2c 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_18440 3ffb4cf8324ac9900139a4009ffafb2c 572 Gene3D G3DSA:3.40.50.12780 15 455 9.2E-119 T 11-10-2018 UP17_06000 cebb2de46d7daaeab4294b7dcb5943d4 131 Pfam PF03960 ArsC family 5 113 3.8E-24 T 11-10-2018 IPR006660 Arsenate reductase-like UP17_06000 cebb2de46d7daaeab4294b7dcb5943d4 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 8.1E-38 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR UP17_06000 cebb2de46d7daaeab4294b7dcb5943d4 131 Gene3D G3DSA:3.40.30.10 1 131 1.1E-47 T 11-10-2018 UP17_06000 cebb2de46d7daaeab4294b7dcb5943d4 131 SUPERFAMILY SSF52833 1 129 3.73E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_06000 cebb2de46d7daaeab4294b7dcb5943d4 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 38.888 T 11-10-2018 IPR023731 Regulatory protein Spx GO:0045892 UP17_02480 2f0390d9176f22a5c77f5bb41c1552d9 67 Pfam PF04328 Selenoprotein, putative 5 67 6.6E-25 T 11-10-2018 IPR007423 Selenoprotein, putative UP17_24340 fe9e688b21a9b1a519bf359f4f9f98d3 709 SUPERFAMILY SSF103501 8 238 1.31E-14 T 11-10-2018 IPR036197 NarG-like superfamily UP17_24340 fe9e688b21a9b1a519bf359f4f9f98d3 709 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_24340 fe9e688b21a9b1a519bf359f4f9f98d3 709 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 282 293 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_24340 fe9e688b21a9b1a519bf359f4f9f98d3 709 Pfam PF02754 Cysteine-rich domain 465 543 8.8E-6 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_24340 fe9e688b21a9b1a519bf359f4f9f98d3 709 Pfam PF02754 Cysteine-rich domain 587 674 5.7E-17 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_24340 fe9e688b21a9b1a519bf359f4f9f98d3 709 Pfam PF13183 4Fe-4S dicluster domain 279 389 4.6E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_24340 fe9e688b21a9b1a519bf359f4f9f98d3 709 SUPERFAMILY SSF46548 261 405 1.17E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_15805 5af3de8bac7fe528ff9e69277aab7a76 182 SUPERFAMILY SSF55811 7 178 5.28E-49 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_15805 5af3de8bac7fe528ff9e69277aab7a76 182 Gene3D G3DSA:3.90.79.10 3 181 6.8E-56 T 11-10-2018 UP17_15805 5af3de8bac7fe528ff9e69277aab7a76 182 Pfam PF00293 NUDIX domain 42 159 1.3E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_15805 5af3de8bac7fe528ff9e69277aab7a76 182 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 34 176 2.5E-23 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 1.3E-113 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 Pfam PF02040 Arsenical pump membrane protein 6 428 2.9E-228 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_04745 6cb6cb233b3cac2052c415c6e17dcfa5 432 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 5 430 8.2E-227 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_10650 87e1c3002b026c3c863e4143f1201ff4 143 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 2.9E-34 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 UP17_10650 87e1c3002b026c3c863e4143f1201ff4 143 Gene3D G3DSA:3.10.129.10 3 128 2.9E-37 T 11-10-2018 UP17_10650 87e1c3002b026c3c863e4143f1201ff4 143 Pfam PF03061 Thioesterase superfamily 18 102 1.5E-12 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_10650 87e1c3002b026c3c863e4143f1201ff4 143 PIRSF PIRSF003230 3 139 6.4E-32 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 UP17_10650 87e1c3002b026c3c863e4143f1201ff4 143 SUPERFAMILY SSF54637 2 133 4.94E-40 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_04360 71de8e9d08356542a8304e48809d9523 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 3.4E-52 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 UP17_04360 71de8e9d08356542a8304e48809d9523 125 Gene3D G3DSA:3.30.1330.40 1 125 8.9E-51 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_04360 71de8e9d08356542a8304e48809d9523 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 101 119 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 UP17_04360 71de8e9d08356542a8304e48809d9523 125 Pfam PF01042 Endoribonuclease L-PSP 9 124 1.4E-44 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 UP17_04360 71de8e9d08356542a8304e48809d9523 125 SUPERFAMILY SSF55298 1 125 4.08E-46 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_07805 3ec78a1f2636253ba4c2f1d6bbea47ec 211 Pfam PF03963 Flagellar hook capping protein - N-terminal region 14 72 1.4E-22 T 11-10-2018 IPR005648 Flagellar hook capping protein UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 SUPERFAMILY SSF56327 150 308 1.43E-51 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 4 310 1.9E-158 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 Gene3D G3DSA:3.90.110.10 149 311 2.3E-60 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 SUPERFAMILY SSF51735 3 146 1.12E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 PIRSF PIRSF000102 1 311 3.7E-103 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 Gene3D G3DSA:3.40.50.720 1 148 2.2E-59 T 11-10-2018 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 311 46.36 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 2.3E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 2.3E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 2.3E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 2.3E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 2.3E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 150 308 7.4E-28 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 UP17_18150 93b340a23d53bbcb157fa830adb021d6 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 146 2.2E-41 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_01515 e7395bb751d8b88ce21b29f6390015fc 150 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 133 2.4E-41 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 UP17_01515 e7395bb751d8b88ce21b29f6390015fc 150 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 127 9.9E-38 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 UP17_01515 e7395bb751d8b88ce21b29f6390015fc 150 Gene3D G3DSA:3.40.50.300 1 149 4.2E-41 T 11-10-2018 UP17_01515 e7395bb751d8b88ce21b29f6390015fc 150 SUPERFAMILY SSF52540 21 122 8.23E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09045 c826610bfb38515c609eb6060ec7813a 298 SUPERFAMILY SSF103481 186 289 7.32E-12 T 11-10-2018 UP17_09045 c826610bfb38515c609eb6060ec7813a 298 Pfam PF00892 EamA-like transporter family 5 139 2.9E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09045 c826610bfb38515c609eb6060ec7813a 298 Pfam PF00892 EamA-like transporter family 152 285 2.4E-24 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09045 c826610bfb38515c609eb6060ec7813a 298 SUPERFAMILY SSF103481 40 142 3.14E-13 T 11-10-2018 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 Gene3D G3DSA:1.20.1080.10 1 243 7.3E-76 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 PRINTS PR00783 Major intrinsic protein family signature 44 68 2.2E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 PRINTS PR00783 Major intrinsic protein family signature 166 188 2.2E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 PRINTS PR00783 Major intrinsic protein family signature 81 100 2.2E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.2E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 PRINTS PR00783 Major intrinsic protein family signature 213 233 2.2E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 PRINTS PR00783 Major intrinsic protein family signature 136 154 2.2E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 Pfam PF00230 Major intrinsic protein 6 230 1.9E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 5.3E-64 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 SUPERFAMILY SSF81338 2 234 3.14E-72 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 UP17_22440 298f2fad853ec4bc4d362bdcd7b32d96 274 ProSitePatterns PS00221 MIP family signature. 62 70 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 UP17_21840 1b3df6e1123d1d3f4e560abd7a7e6787 497 Gene3D G3DSA:1.20.1250.20 1 497 5.1E-152 T 11-10-2018 UP17_21840 1b3df6e1123d1d3f4e560abd7a7e6787 497 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 UP17_21840 1b3df6e1123d1d3f4e560abd7a7e6787 497 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 UP17_21840 1b3df6e1123d1d3f4e560abd7a7e6787 497 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 491 2.6E-132 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 UP17_21840 1b3df6e1123d1d3f4e560abd7a7e6787 497 Pfam PF00854 POT family 96 464 3.9E-79 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 UP17_21840 1b3df6e1123d1d3f4e560abd7a7e6787 497 SUPERFAMILY SSF103473 20 488 7.85E-31 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 SUPERFAMILY SSF51735 1 153 2.87E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 TIGRFAM TIGR03855 NAD_NadX: aspartate dehydrogenase 29 259 2.0E-70 T 11-10-2018 IPR022487 L-aspartate dehydrogenase, archaeal GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 PIRSF PIRSF005227 1 261 5.8E-81 T 11-10-2018 IPR011182 L-aspartate dehydrogenase GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 Gene3D G3DSA:3.30.360.10 124 235 2.7E-78 T 11-10-2018 UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 SUPERFAMILY SSF55347 124 230 9.15E-28 T 11-10-2018 UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 Hamap MF_01265 Probable L-aspartate dehydrogenase [nadX]. 1 260 30.614 T 11-10-2018 IPR020626 L-aspartate dehydrogenase, prokaryotic GO:0009435|GO:0033735|GO:0055114 KEGG: 00760+1.4.1.21 UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 Gene3D G3DSA:3.40.50.720 4 253 2.7E-78 T 11-10-2018 UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 Pfam PF01958 Domain of unknown function DUF108 161 248 3.3E-35 T 11-10-2018 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21 UP17_10930 3699a581d4cbda88b76f0d3dd17d5075 261 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 104 1.7E-11 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 UP17_15385 a855effd03be95813e34b4b185c56eac 390 Pfam PF01264 Chorismate synthase 1 364 9.2E-125 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.368 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 PIRSF PIRSF001456 1 384 7.7E-132 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 369 1.4E-130 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 Gene3D G3DSA:3.60.150.10 1 389 1.1E-153 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_15385 a855effd03be95813e34b4b185c56eac 390 SUPERFAMILY SSF103263 1 388 4.84E-149 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 UP17_07480 5559331a220a05bd8bb776482d49abfa 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 291 2.0E-86 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 UP17_07480 5559331a220a05bd8bb776482d49abfa 291 Pfam PF08340 Domain of unknown function (DUF1732) 207 291 5.1E-38 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 UP17_07480 5559331a220a05bd8bb776482d49abfa 291 Pfam PF03755 YicC-like family, N-terminal region 2 156 2.9E-39 T 11-10-2018 IPR013527 YicC-like, N-terminal UP17_04380 597a83fbcaf331888be41d922ecb9f17 342 SMART SM00829 20 332 7.4E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_04380 597a83fbcaf331888be41d922ecb9f17 342 SUPERFAMILY SSF51735 125 299 1.21E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_04380 597a83fbcaf331888be41d922ecb9f17 342 Pfam PF00107 Zinc-binding dehydrogenase 159 283 5.5E-21 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_04380 597a83fbcaf331888be41d922ecb9f17 342 Gene3D G3DSA:3.90.180.10 17 332 5.1E-134 T 11-10-2018 UP17_04380 597a83fbcaf331888be41d922ecb9f17 342 Gene3D G3DSA:3.40.50.720 128 304 5.1E-134 T 11-10-2018 UP17_04380 597a83fbcaf331888be41d922ecb9f17 342 Pfam PF16884 N-terminal domain of oxidoreductase 8 112 2.0E-40 T 11-10-2018 UP17_04380 597a83fbcaf331888be41d922ecb9f17 342 SUPERFAMILY SSF50129 4 144 1.79E-41 T 11-10-2018 IPR011032 GroES-like superfamily UP17_05170 f05c2f719b3b39d9c65b7999ef7b5721 295 Pfam PF01545 Cation efflux family 13 205 3.5E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_05170 f05c2f719b3b39d9c65b7999ef7b5721 295 Gene3D G3DSA:1.20.1510.10 8 205 3.7E-53 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_05170 f05c2f719b3b39d9c65b7999ef7b5721 295 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 2.7E-17 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain UP17_05170 f05c2f719b3b39d9c65b7999ef7b5721 295 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 9 286 4.0E-66 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_05170 f05c2f719b3b39d9c65b7999ef7b5721 295 SUPERFAMILY SSF160240 209 286 4.19E-17 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 UP17_05170 f05c2f719b3b39d9c65b7999ef7b5721 295 SUPERFAMILY SSF161111 9 207 6.93E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_05170 f05c2f719b3b39d9c65b7999ef7b5721 295 Gene3D G3DSA:3.30.70.1350 206 287 1.8E-14 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 UP17_20040 a4e3ef5d046c48c1cbdbb0fc1dca0d52 490 SUPERFAMILY SSF55874 23 160 3.01E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20040 a4e3ef5d046c48c1cbdbb0fc1dca0d52 490 Gene3D G3DSA:3.30.565.10 11 212 3.0E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20040 a4e3ef5d046c48c1cbdbb0fc1dca0d52 490 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 22 148 5.2E-30 T 11-10-2018 UP17_06105 4cbe2869fdf5fdfec8d1cf33f08b2c57 121 Pfam PF07098 Protein of unknown function (DUF1360) 13 114 1.9E-28 T 11-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 UP17_21120 2facfa8f55f023b4c3d6206956bf96a2 390 PIRSF PIRSF005572 3 383 5.4E-132 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 UP17_21120 2facfa8f55f023b4c3d6206956bf96a2 390 Pfam PF00266 Aminotransferase class-V 6 368 1.1E-82 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_21120 2facfa8f55f023b4c3d6206956bf96a2 390 Gene3D G3DSA:3.40.640.10 17 258 1.7E-144 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_21120 2facfa8f55f023b4c3d6206956bf96a2 390 SUPERFAMILY SSF53383 5 375 2.76E-105 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_21120 2facfa8f55f023b4c3d6206956bf96a2 390 Gene3D G3DSA:3.90.1150.10 6 375 1.7E-144 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_04400 77c822c87fa37091d1f1e06feb0bb1fc 222 SUPERFAMILY SSF56037 61 215 5.49E-27 T 11-10-2018 UP17_04400 77c822c87fa37091d1f1e06feb0bb1fc 222 SMART SM00873 62 212 3.7E-7 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 UP17_04400 77c822c87fa37091d1f1e06feb0bb1fc 222 Pfam PF03483 B3/4 domain 64 182 1.7E-15 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 UP17_04400 77c822c87fa37091d1f1e06feb0bb1fc 222 Gene3D G3DSA:3.50.40.10 68 213 3.2E-5 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 UP17_00090 51379ee00f8a0ef25e1a7ce05be19644 223 Pfam PF01712 Deoxynucleoside kinase 15 213 4.9E-65 T 11-10-2018 IPR031314 Deoxynucleoside kinase domain UP17_00090 51379ee00f8a0ef25e1a7ce05be19644 223 Gene3D G3DSA:3.40.50.300 12 217 1.9E-59 T 11-10-2018 UP17_00090 51379ee00f8a0ef25e1a7ce05be19644 223 SUPERFAMILY SSF52540 12 217 9.82E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00090 51379ee00f8a0ef25e1a7ce05be19644 223 PIRSF PIRSF000705 2 222 4.9E-67 T 11-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Gene3D G3DSA:3.30.565.10 392 536 3.4E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Gene3D G3DSA:3.30.450.20 201 312 1.6E-23 T 11-10-2018 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Gene3D G3DSA:1.10.287.130 313 378 8.4E-6 T 11-10-2018 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 SUPERFAMILY SSF103190 39 170 1.02E-31 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Gene3D G3DSA:3.30.450.20 34 172 2.5E-36 T 11-10-2018 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 2.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 487 2.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 2.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 2.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 SUPERFAMILY SSF55890 321 375 3.4E-14 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 SMART SM00091 214 279 3.0E-4 T 11-10-2018 IPR000014 PAS domain UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 SUPERFAMILY SSF55874 390 530 5.89E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Pfam PF13596 PAS domain 220 291 1.3E-5 T 11-10-2018 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Pfam PF17203 Single cache domain 3 44 170 5.8E-19 T 11-10-2018 IPR033463 Single cache domain 3 UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 527 8.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 SMART SM00387 418 529 4.2E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 375 3.6E-13 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain UP17_22160 a2be6fbb31571dd87ec44d837d015c1e 536 SUPERFAMILY SSF55785 218 290 7.33E-7 T 11-10-2018 IPR035965 PAS domain superfamily UP17_14055 6ccadf2b95f0f24d319cc9b13cd96078 106 Pfam PF09685 Domain of unknown function (DUF4870) 7 106 8.6E-32 T 11-10-2018 IPR019109 Protein of unknown function DUF4870 UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 Gene3D G3DSA:3.20.20.100 2 310 3.6E-117 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 Pfam PF00248 Aldo/keto reductase family 16 308 1.5E-78 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 SUPERFAMILY SSF51430 4 309 7.2E-95 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 142 159 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 PRINTS PR00069 Aldo-keto reductase signature 242 266 3.2E-19 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 PRINTS PR00069 Aldo-keto reductase signature 142 159 3.2E-19 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 PRINTS PR00069 Aldo-keto reductase signature 111 129 3.2E-19 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_02340 f5e1235195b35be101088fcc1f60b1ac 310 PRINTS PR00069 Aldo-keto reductase signature 45 69 3.2E-19 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 Pfam PF08245 Mur ligase middle domain 486 698 1.6E-23 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 Gene3D G3DSA:3.30.470.20 207 342 4.1E-13 T 11-10-2018 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 Pfam PF08443 RimK-like ATP-grasp domain 215 314 1.6E-8 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 SUPERFAMILY SSF53623 444 736 2.88E-41 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 Gene3D G3DSA:3.30.470.20 369 474 1.5E-15 T 11-10-2018 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 SUPERFAMILY SSF53244 723 851 1.06E-20 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 Pfam PF02875 Mur ligase family, glutamate ligase domain 723 796 6.5E-9 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 SUPERFAMILY SSF56059 215 494 2.73E-32 T 11-10-2018 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 Gene3D G3DSA:3.40.1190.10 477 717 5.0E-37 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 3 856 8.1E-293 T 11-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 UP17_06545 3e8c4e590729d6ce197563e328d6f3aa 873 Gene3D G3DSA:3.90.190.20 728 864 3.1E-20 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 UP17_07710 66ea131b8e596a861086c024179406ec 386 Gene3D G3DSA:3.40.50.261 240 386 3.5E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 UP17_07710 66ea131b8e596a861086c024179406ec 386 SUPERFAMILY SSF52210 241 385 4.06E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 UP17_07710 66ea131b8e596a861086c024179406ec 386 PIRSF PIRSF001554 1 386 1.8E-156 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_07710 66ea131b8e596a861086c024179406ec 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 5.2E-167 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_07710 66ea131b8e596a861086c024179406ec 386 Pfam PF00549 CoA-ligase 262 381 1.0E-25 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 UP17_07710 66ea131b8e596a861086c024179406ec 386 Gene3D G3DSA:3.30.1490.20 21 104 4.1E-99 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_07710 66ea131b8e596a861086c024179406ec 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.214 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_07710 66ea131b8e596a861086c024179406ec 386 Gene3D G3DSA:3.30.470.20 1 234 4.1E-99 T 11-10-2018 UP17_07710 66ea131b8e596a861086c024179406ec 386 Pfam PF08442 ATP-grasp domain 2 203 3.0E-83 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 UP17_07710 66ea131b8e596a861086c024179406ec 386 SUPERFAMILY SSF56059 1 238 1.19E-87 T 11-10-2018 UP17_18520 d90128c0aafcf8b6ae5c60a97dd8af23 149 Gene3D G3DSA:3.40.50.450 2 147 5.4E-6 T 11-10-2018 UP17_18520 d90128c0aafcf8b6ae5c60a97dd8af23 149 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 6.6E-62 T 11-10-2018 IPR019884 YtoQ family protein UP17_18520 d90128c0aafcf8b6ae5c60a97dd8af23 149 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 4.8E-65 T 11-10-2018 IPR019884 YtoQ family protein UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 22.759 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 7.9E-41 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 5.8E-29 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 Pfam PF00467 KOW motif 5 36 3.2E-10 T 11-10-2018 IPR005824 KOW UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 Gene3D G3DSA:2.30.30.30 1 100 2.8E-42 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 SUPERFAMILY SSF50104 1 99 2.11E-38 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily UP17_00745 417f892e56e6e384ebcbd39ae00f1901 103 SMART SM00739 2 29 3.6E-7 T 11-10-2018 IPR005824 KOW UP17_08350 4677905a32ae622844413728f88401f5 443 SUPERFAMILY SSF103190 37 181 9.02E-9 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily UP17_08350 4677905a32ae622844413728f88401f5 443 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 229 283 3.5E-14 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain UP17_08350 4677905a32ae622844413728f88401f5 443 SMART SM00387 324 437 6.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_08350 4677905a32ae622844413728f88401f5 443 SUPERFAMILY SSF55874 296 434 4.07E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_08350 4677905a32ae622844413728f88401f5 443 Gene3D G3DSA:3.30.565.10 279 437 1.7E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_08350 4677905a32ae622844413728f88401f5 443 Pfam PF14501 GHKL domain 325 434 4.2E-15 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain UP17_17340 d8df22bb91bee040c48c19374ffca420 323 Pfam PF08378 Nuclease-related domain 41 152 2.1E-17 T 11-10-2018 IPR011528 Nuclease-related domain, NERD UP17_08115 30f06d5f5b23c405ca352304bd59cc37 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 329 7.4E-48 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 UP17_16720 a4db6b12eeb99d774876af7290471636 335 Hamap MF_01562 UPF0365 protein . 4 324 48.693 T 11-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity UP17_16720 a4db6b12eeb99d774876af7290471636 335 Pfam PF12127 SigmaW regulon antibacterial 10 320 1.3E-160 T 11-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 Pfam PF00849 RNA pseudouridylate synthase 88 242 3.3E-39 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 SUPERFAMILY SSF55120 74 301 1.15E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 SMART SM00363 15 72 3.4E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 Pfam PF01479 S4 domain 15 61 4.0E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 SUPERFAMILY SSF55174 14 101 1.61E-14 T 11-10-2018 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 301 1.9E-105 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 Gene3D G3DSA:3.10.290.10 4 71 2.7E-17 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_07415 02eb20f4cc3b577a8e43b970077087d1 305 Gene3D G3DSA:3.30.2350.10 81 304 8.4E-78 T 11-10-2018 UP17_11310 5b6b93510dbdb69e49464c949221eb6e 126 SUPERFAMILY SSF50249 3 112 9.42E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_11310 5b6b93510dbdb69e49464c949221eb6e 126 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 51 108 2.0E-16 T 11-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal UP17_11310 5b6b93510dbdb69e49464c949221eb6e 126 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 14 44 1.6E-13 T 11-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal UP17_12310 86411e0dd15d273c83fc938cabab5130 147 SUPERFAMILY SSF54001 31 147 3.38E-37 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_12310 86411e0dd15d273c83fc938cabab5130 147 Pfam PF00877 NlpC/P60 family 43 145 3.6E-30 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_12310 86411e0dd15d273c83fc938cabab5130 147 Gene3D G3DSA:3.90.1720.10 25 147 4.6E-41 T 11-10-2018 UP17_07035 9515a0086c19bf4ca0173ca6624f6742 259 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 11 245 2.1E-70 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_07035 9515a0086c19bf4ca0173ca6624f6742 259 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_07035 9515a0086c19bf4ca0173ca6624f6742 259 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 259 31.554 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_07035 9515a0086c19bf4ca0173ca6624f6742 259 SUPERFAMILY SSF51366 1 252 1.88E-79 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_07035 9515a0086c19bf4ca0173ca6624f6742 259 Gene3D G3DSA:3.20.20.70 1 259 1.3E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_07035 9515a0086c19bf4ca0173ca6624f6742 259 Pfam PF00290 Tryptophan synthase alpha chain 10 250 2.0E-80 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_03435 cf37ef5a8e3ea94037a2836adac42a21 530 Gene3D G3DSA:1.20.1740.10 2 463 1.0E-76 T 11-10-2018 UP17_03435 cf37ef5a8e3ea94037a2836adac42a21 530 PIRSF PIRSF006060 1 525 1.3E-73 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_03435 cf37ef5a8e3ea94037a2836adac42a21 530 Pfam PF13520 Amino acid permease 9 425 7.4E-46 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 Gene3D G3DSA:4.10.640.10 3 78 5.5E-30 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 SUPERFAMILY SSF46911 4 77 6.67E-30 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 11 77 1.5E-36 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 Pfam PF01084 Ribosomal protein S18 23 73 7.2E-27 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 26 77 5.0E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24960 25bc980f70b8b49214e85679636aef2e 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 22.155 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 SUPERFAMILY SSF46785 3 78 8.65E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 Pfam PF00455 DeoR C terminal sensor domain 75 228 1.1E-48 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 Gene3D G3DSA:1.10.10.10 2 92 5.6E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.4E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.4E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 SMART SM01134 73 231 4.7E-65 T 11-10-2018 UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.6E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 SMART SM00420 6 58 6.0E-20 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_13700 2eb4d6588675434a4e03c34d455096a8 250 SUPERFAMILY SSF100950 74 227 7.64E-36 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_02315 63a97642e84e8d70003677b684bb6809 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 1.1E-33 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 UP17_02315 63a97642e84e8d70003677b684bb6809 340 SUPERFAMILY SSF55347 129 288 2.45E-35 T 11-10-2018 UP17_02315 63a97642e84e8d70003677b684bb6809 340 Gene3D G3DSA:3.30.360.10 128 334 1.0E-100 T 11-10-2018 UP17_02315 63a97642e84e8d70003677b684bb6809 340 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 251 6.3E-9 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 UP17_02315 63a97642e84e8d70003677b684bb6809 340 Gene3D G3DSA:3.40.50.720 7 314 1.0E-100 T 11-10-2018 UP17_02315 63a97642e84e8d70003677b684bb6809 340 SUPERFAMILY SSF51735 3 155 1.7E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_23045 442ee796547d3e4832a740c1cfb86554 333 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 3 314 1.8E-104 T 11-10-2018 IPR014254 Spore coat protein YutH UP17_23045 442ee796547d3e4832a740c1cfb86554 333 Gene3D G3DSA:3.90.1200.10 99 314 4.2E-22 T 11-10-2018 UP17_23045 442ee796547d3e4832a740c1cfb86554 333 SUPERFAMILY SSF56112 27 316 6.53E-8 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_17770 39ad8247c113c059ac4540ee6492ba3e 251 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 182 248 2.1E-26 T 11-10-2018 IPR018656 Domain of unknown function DUF2087 UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 Gene3D G3DSA:1.10.3710.10 333 423 7.3E-25 T 11-10-2018 UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 SUPERFAMILY SSF52540 4 233 1.12E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 124 2.7E-16 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 Gene3D G3DSA:1.20.272.10 228 332 1.5E-42 T 11-10-2018 UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 Gene3D G3DSA:3.40.50.300 1 150 6.7E-41 T 11-10-2018 UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 419 3.5E-66 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 Pfam PF16193 AAA C-terminal domain 175 253 5.2E-25 T 11-10-2018 IPR032423 AAA C-terminal domain UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 SUPERFAMILY SSF48019 239 421 4.36E-71 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 Gene3D G3DSA:1.10.8.60 151 226 3.3E-21 T 11-10-2018 UP17_17075 87774f32bd678bef8ccfa1293b3e934c 423 SMART SM00382 39 151 5.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_15390 8d67577109799f33055bd79d89cf60f8 257 Pfam PF03705 CheR methyltransferase, all-alpha domain 3 53 2.5E-13 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal UP17_15390 8d67577109799f33055bd79d89cf60f8 257 SMART SM00138 2 255 4.7E-99 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 SUPERFAMILY SSF47757 3 67 2.75E-11 T 11-10-2018 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 Pfam PF01739 CheR methyltransferase, SAM binding domain 68 248 4.6E-57 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal UP17_15390 8d67577109799f33055bd79d89cf60f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 24 37 8.1E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 196 210 8.1E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 98 118 8.1E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 61 73 8.1E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 130 146 8.1E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 PRINTS PR00996 Glutamate methyltransferase family signature 215 238 8.1E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 Gene3D G3DSA:3.40.50.150 67 257 1.3E-63 T 11-10-2018 UP17_15390 8d67577109799f33055bd79d89cf60f8 257 SUPERFAMILY SSF53335 68 249 4.7E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 Pfam PF06470 SMC proteins Flexible Hinge Domain 518 637 1.4E-28 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 SUPERFAMILY SSF75553 484 686 9.94E-55 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 Gene3D G3DSA:3.30.70.1620 578 667 5.2E-67 T 11-10-2018 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 Gene3D G3DSA:1.20.1060.20 495 679 5.2E-67 T 11-10-2018 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 SUPERFAMILY SSF52540 1 1163 2.22E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 Gene3D G3DSA:3.40.50.300 1 246 7.4E-57 T 11-10-2018 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 Gene3D G3DSA:3.40.50.300 967 1187 6.4E-55 T 11-10-2018 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1171 4.3E-68 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 SMART SM00968 518 637 5.8E-40 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1180 24.246 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 PIRSF PIRSF005719 1 1185 0.0 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein UP17_07620 543b089c041d3b61a6dd265fd96f32fa 1187 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1178 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 UP17_22120 6de0eee1cd4798e4af286aee56bb5201 153 SUPERFAMILY SSF55811 26 103 1.11E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_22120 6de0eee1cd4798e4af286aee56bb5201 153 Pfam PF00293 NUDIX domain 26 95 3.4E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 UP17_22120 6de0eee1cd4798e4af286aee56bb5201 153 Gene3D G3DSA:3.90.79.10 3 152 4.6E-34 T 11-10-2018 UP17_22120 6de0eee1cd4798e4af286aee56bb5201 153 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 UP17_22120 6de0eee1cd4798e4af286aee56bb5201 153 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 147 1.3E-48 T 11-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 UP17_22120 6de0eee1cd4798e4af286aee56bb5201 153 PRINTS PR00502 NUDIX hydrolase family signature 60 75 2.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_22120 6de0eee1cd4798e4af286aee56bb5201 153 PRINTS PR00502 NUDIX hydrolase family signature 46 60 2.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 SMART SM00866 94 233 2.3E-42 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 7.3E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 7.3E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 Pfam PF07702 UTRA domain 94 233 1.1E-40 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 SMART SM00345 14 73 2.5E-24 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.3E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 Gene3D G3DSA:3.40.1410.10 77 240 7.7E-55 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 SUPERFAMILY SSF46785 1 84 1.07E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 Gene3D G3DSA:1.10.10.10 8 76 4.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01165 396f291c0ecd105279ebc448ae9e90c9 240 SUPERFAMILY SSF64288 61 239 1.37E-55 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_23375 28722f5f034f2314dbf55a6ac4a00dcf 340 PIRSF PIRSF017082 2 340 1.8E-100 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 UP17_23375 28722f5f034f2314dbf55a6ac4a00dcf 340 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 337 4.9E-35 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 UP17_23375 28722f5f034f2314dbf55a6ac4a00dcf 340 Gene3D G3DSA:3.40.190.150 39 331 1.7E-77 T 11-10-2018 UP17_23375 28722f5f034f2314dbf55a6ac4a00dcf 340 Gene3D G3DSA:3.40.190.10 139 266 1.7E-77 T 11-10-2018 UP17_23375 28722f5f034f2314dbf55a6ac4a00dcf 340 SUPERFAMILY SSF53850 40 245 6.99E-10 T 11-10-2018 UP17_13030 c09d0ec009d343fb4a5c9437376e747c 208 SUPERFAMILY SSF52218 1 206 6.77E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_13030 c09d0ec009d343fb4a5c9437376e747c 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 205 23.984 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 UP17_13030 c09d0ec009d343fb4a5c9437376e747c 208 Pfam PF02525 Flavodoxin-like fold 3 203 2.6E-34 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_13030 c09d0ec009d343fb4a5c9437376e747c 208 Gene3D G3DSA:3.40.50.360 1 208 1.3E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_09195 33b2d1cbd25ef5fbb0511b6f84d4c0c3 237 Gene3D G3DSA:3.40.50.1000 6 223 1.9E-74 T 11-10-2018 IPR023214 HAD superfamily UP17_09195 33b2d1cbd25ef5fbb0511b6f84d4c0c3 237 Gene3D G3DSA:1.10.150.240 17 100 1.9E-74 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 UP17_09195 33b2d1cbd25ef5fbb0511b6f84d4c0c3 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 95 194 3.0E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_09195 33b2d1cbd25ef5fbb0511b6f84d4c0c3 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 199 2.2E-19 T 11-10-2018 UP17_09195 33b2d1cbd25ef5fbb0511b6f84d4c0c3 237 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 226 1.2E-77 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 UP17_09195 33b2d1cbd25ef5fbb0511b6f84d4c0c3 237 SUPERFAMILY SSF56784 4 228 3.86E-38 T 11-10-2018 IPR036412 HAD-like superfamily UP17_12350 fe57e46e1853d2eb4bcea7f1f15fdd49 301 SUPERFAMILY SSF53850 31 299 2.9E-65 T 11-10-2018 UP17_12350 fe57e46e1853d2eb4bcea7f1f15fdd49 301 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 31 296 2.1E-57 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 UP17_12350 fe57e46e1853d2eb4bcea7f1f15fdd49 301 Gene3D G3DSA:3.40.190.10 33 295 9.3E-97 T 11-10-2018 UP17_12350 fe57e46e1853d2eb4bcea7f1f15fdd49 301 Gene3D G3DSA:3.40.190.120 135 239 9.3E-97 T 11-10-2018 UP17_12025 089512f484d35e3a8178525ec47c3973 773 Gene3D G3DSA:3.90.1170.50 33 121 6.1E-91 T 11-10-2018 UP17_12025 089512f484d35e3a8178525ec47c3973 773 SUPERFAMILY SSF56003 125 769 3.93E-150 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 UP17_12025 089512f484d35e3a8178525ec47c3973 773 Gene3D G3DSA:3.30.365.10 16 285 6.1E-91 T 11-10-2018 UP17_12025 089512f484d35e3a8178525ec47c3973 773 Gene3D G3DSA:3.30.365.10 454 624 2.1E-94 T 11-10-2018 UP17_12025 089512f484d35e3a8178525ec47c3973 773 Gene3D G3DSA:3.30.365.10 122 361 6.1E-91 T 11-10-2018 UP17_12025 089512f484d35e3a8178525ec47c3973 773 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 155 706 4.7E-129 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 UP17_12025 089512f484d35e3a8178525ec47c3973 773 SUPERFAMILY SSF54665 2 142 1.11E-36 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily UP17_12025 089512f484d35e3a8178525ec47c3973 773 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 18 120 5.3E-24 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead UP17_12025 089512f484d35e3a8178525ec47c3973 773 SMART SM01008 18 121 1.4E-33 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead UP17_12025 089512f484d35e3a8178525ec47c3973 773 Gene3D G3DSA:3.30.365.10 372 762 2.1E-94 T 11-10-2018 UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 10 434 1.2E-189 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 SUPERFAMILY SSF52540 93 361 2.25E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 Gene3D G3DSA:3.40.50.12240 11 437 3.1E-147 T 11-10-2018 UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 SMART SM00382 158 339 7.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 20 434 9.6E-200 T 11-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 355 7.8E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_07785 40af67cff0d290fef0c7c0811718c74c 439 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 22 89 1.0E-7 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 UP17_18795 04eae5b553cbe6d42c009e744500f049 309 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 77 304 3.0E-59 T 11-10-2018 UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 216 235 1.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 155 1.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 204 1.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 206 5.3E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 269 289 5.3E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 86 5.3E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 155 5.3E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 254 5.3E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 235 5.3E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18795 04eae5b553cbe6d42c009e744500f049 309 Gene3D G3DSA:3.40.50.720 27 307 1.5E-83 T 11-10-2018 UP17_18795 04eae5b553cbe6d42c009e744500f049 309 SUPERFAMILY SSF51735 67 306 6.67E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_23655 d7038978b29bde0b2bed237661331195 334 Pfam PF01032 FecCD transport family 19 329 1.0E-90 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 UP17_23655 d7038978b29bde0b2bed237661331195 334 Gene3D G3DSA:1.10.3470.10 8 332 2.8E-88 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_23655 d7038978b29bde0b2bed237661331195 334 SUPERFAMILY SSF81345 5 329 6.67E-79 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_13295 76ebabd3dfd96dd78afbb03cd7c233ea 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 104 7.3E-7 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_13295 76ebabd3dfd96dd78afbb03cd7c233ea 328 Pfam PF13602 Zinc-binding dehydrogenase 196 320 6.6E-26 T 11-10-2018 UP17_13295 76ebabd3dfd96dd78afbb03cd7c233ea 328 SUPERFAMILY SSF51735 127 297 1.27E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13295 76ebabd3dfd96dd78afbb03cd7c233ea 328 Gene3D G3DSA:3.90.180.10 8 319 6.0E-93 T 11-10-2018 UP17_13295 76ebabd3dfd96dd78afbb03cd7c233ea 328 SUPERFAMILY SSF50129 1 161 2.43E-32 T 11-10-2018 IPR011032 GroES-like superfamily UP17_13295 76ebabd3dfd96dd78afbb03cd7c233ea 328 Gene3D G3DSA:3.40.50.720 138 271 6.0E-93 T 11-10-2018 UP17_13295 76ebabd3dfd96dd78afbb03cd7c233ea 328 SMART SM00829 10 320 1.8E-12 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_16820 6ae7b52296906d5186e818ae5d7c3b1b 44 Pfam PF14141 YqzM-like protein 2 43 1.2E-19 T 11-10-2018 IPR025416 YqzM-like protein UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 Pfam PF01467 Cytidylyltransferase-like 6 134 2.7E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 Gene3D G3DSA:3.40.50.620 1 163 2.6E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 67 2.0E-4 T 11-10-2018 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 63 6.0E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.8E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 SUPERFAMILY SSF52374 3 157 7.04E-44 T 11-10-2018 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.721 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 UP17_07200 4e122636731c9e1e341bc4abe3695a36 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 2.1E-61 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 UP17_08255 f247507bab3d517e107432ab5a19a733 630 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 17 591 3.0E-61 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 UP17_08255 f247507bab3d517e107432ab5a19a733 630 Pfam PF03169 OPT oligopeptide transporter protein 22 587 5.3E-98 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 UP17_08255 f247507bab3d517e107432ab5a19a733 630 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 22 589 7.2E-118 T 11-10-2018 IPR004814 Oligopeptide transporter OPT UP17_02875 1142c55077b0e13f4e45e8ce3cfc5525 121 Pfam PF01638 HxlR-like helix-turn-helix 23 109 6.0E-26 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type UP17_02875 1142c55077b0e13f4e45e8ce3cfc5525 121 Gene3D G3DSA:1.10.10.10 9 120 2.6E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_02875 1142c55077b0e13f4e45e8ce3cfc5525 121 SUPERFAMILY SSF46785 15 118 9.58E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_02350 7abde35aa906c018793227f437c964a2 915 Pfam PF01926 50S ribosome-binding GTPase 379 525 7.1E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_02350 7abde35aa906c018793227f437c964a2 915 Gene3D G3DSA:1.25.40.10 9 219 4.8E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_02350 7abde35aa906c018793227f437c964a2 915 SUPERFAMILY SSF52540 375 599 5.49E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02350 7abde35aa906c018793227f437c964a2 915 SUPERFAMILY SSF48452 44 165 2.53E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_00805 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00805 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00805 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00805 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 11-10-2018 UP17_00805 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00805 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18560 e311c01e0cc8ca76c42038bddd644c6d 260 SUPERFAMILY SSF56112 2 212 2.42E-29 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_18560 e311c01e0cc8ca76c42038bddd644c6d 260 Gene3D G3DSA:3.90.1200.10 74 256 1.7E-19 T 11-10-2018 UP17_18560 e311c01e0cc8ca76c42038bddd644c6d 260 Pfam PF01636 Phosphotransferase enzyme family 40 215 4.5E-20 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase UP17_20165 8235c83861b1cfc5a589bcf233e68bde 438 Pfam PF01566 Natural resistance-associated macrophage protein 50 411 7.5E-47 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_11215 707e47b241da013b39a130696f8592ff 107 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 4.9E-22 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_11215 707e47b241da013b39a130696f8592ff 107 Gene3D G3DSA:1.10.10.10 1 107 1.2E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_11215 707e47b241da013b39a130696f8592ff 107 SUPERFAMILY SSF46785 12 103 1.52E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_06960 5bbbe58560a772df6a27539871515d33 325 SUPERFAMILY SSF52922 188 325 6.67E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_06960 5bbbe58560a772df6a27539871515d33 325 Gene3D G3DSA:3.40.50.920 193 325 1.7E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_06960 5bbbe58560a772df6a27539871515d33 325 SMART SM00861 4 179 7.8E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_06960 5bbbe58560a772df6a27539871515d33 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 3.9E-41 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_06960 5bbbe58560a772df6a27539871515d33 325 Pfam PF02780 Transketolase, C-terminal domain 194 314 3.2E-37 T 11-10-2018 IPR033248 Transketolase, C-terminal domain UP17_06960 5bbbe58560a772df6a27539871515d33 325 Gene3D G3DSA:3.40.50.970 1 192 8.1E-82 T 11-10-2018 UP17_06960 5bbbe58560a772df6a27539871515d33 325 SUPERFAMILY SSF52518 4 193 2.83E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 Gene3D G3DSA:4.10.520.10 1 90 2.5E-40 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-36 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 SMART SM00411 1 90 6.3E-47 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_10470 b366ae4eae5eea1c35894c8595b4ac92 90 SUPERFAMILY SSF47729 1 90 1.19E-34 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 UP17_18715 5544c720690464182ca42850182e6d8c 166 SUPERFAMILY SSF109854 9 163 4.27E-24 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_18715 5544c720690464182ca42850182e6d8c 166 Gene3D G3DSA:1.20.120.450 6 165 1.2E-35 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_18715 5544c720690464182ca42850182e6d8c 166 Pfam PF12867 DinB superfamily 11 159 9.4E-18 T 11-10-2018 IPR024775 DinB-like domain UP17_18825 1bb6672e4bdb54a3419ad025c4c62841 146 SMART SM00347 27 132 9.6E-4 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_18825 1bb6672e4bdb54a3419ad025c4c62841 146 SUPERFAMILY SSF46785 9 128 5.46E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_18825 1bb6672e4bdb54a3419ad025c4c62841 146 Gene3D G3DSA:1.10.10.10 3 144 2.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_02975 b444bc8569dfd70758e44f3ed58a20f6 126 Pfam PF13411 MerR HTH family regulatory protein 2 66 1.0E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_02975 b444bc8569dfd70758e44f3ed58a20f6 126 SMART SM00422 2 70 7.3E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_02975 b444bc8569dfd70758e44f3ed58a20f6 126 SUPERFAMILY SSF46955 2 116 6.59E-31 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_02975 b444bc8569dfd70758e44f3ed58a20f6 126 Gene3D G3DSA:1.10.1660.10 1 126 7.9E-34 T 11-10-2018 UP17_02975 b444bc8569dfd70758e44f3ed58a20f6 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_02975 b444bc8569dfd70758e44f3ed58a20f6 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_02975 b444bc8569dfd70758e44f3ed58a20f6 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_25340 37c420249531b4ff42aa37a0973dbb44 104 SMART SM00530 5 58 1.4E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_25340 37c420249531b4ff42aa37a0973dbb44 104 SUPERFAMILY SSF47413 2 60 2.15E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_25340 37c420249531b4ff42aa37a0973dbb44 104 Gene3D G3DSA:1.10.260.40 1 102 3.9E-16 T 11-10-2018 UP17_25340 37c420249531b4ff42aa37a0973dbb44 104 Pfam PF01381 Helix-turn-helix 12 57 2.6E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_23660 23880e684e5d8167f97eb91e09066bb7 329 Gene3D G3DSA:3.40.50.1980 148 329 1.9E-63 T 11-10-2018 UP17_23660 23880e684e5d8167f97eb91e09066bb7 329 SUPERFAMILY SSF53807 44 322 2.36E-70 T 11-10-2018 UP17_23660 23880e684e5d8167f97eb91e09066bb7 329 Gene3D G3DSA:3.40.50.1980 42 147 5.9E-35 T 11-10-2018 UP17_23660 23880e684e5d8167f97eb91e09066bb7 329 Pfam PF01497 Periplasmic binding protein 61 301 1.5E-33 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain UP17_06310 c21111d63de6d1d0908cc233dd05817a 141 SMART SM00422 8 76 1.2E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_06310 c21111d63de6d1d0908cc233dd05817a 141 Gene3D G3DSA:1.10.1660.10 5 123 4.4E-23 T 11-10-2018 UP17_06310 c21111d63de6d1d0908cc233dd05817a 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 9.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_06310 c21111d63de6d1d0908cc233dd05817a 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 43 63 9.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_06310 c21111d63de6d1d0908cc233dd05817a 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 9.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_06310 c21111d63de6d1d0908cc233dd05817a 141 Pfam PF13411 MerR HTH family regulatory protein 8 72 8.7E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_06310 c21111d63de6d1d0908cc233dd05817a 141 SUPERFAMILY SSF46955 8 114 1.17E-21 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_15055 7872747a7b79802736aca4f9e4dc5f41 1238 SUPERFAMILY SSF52540 628 949 8.86E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15055 7872747a7b79802736aca4f9e4dc5f41 1238 SUPERFAMILY SSF52540 32 259 2.19E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15055 7872747a7b79802736aca4f9e4dc5f41 1238 Pfam PF00350 Dynamin family 49 202 7.1E-26 T 11-10-2018 IPR022812 Dynamin superfamily UP17_15055 7872747a7b79802736aca4f9e4dc5f41 1238 Pfam PF00350 Dynamin family 652 878 2.0E-40 T 11-10-2018 IPR022812 Dynamin superfamily UP17_15055 7872747a7b79802736aca4f9e4dc5f41 1238 Gene3D G3DSA:3.40.50.300 49 276 1.4E-35 T 11-10-2018 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 SUPERFAMILY SSF52172 1 134 1.57E-34 T 11-10-2018 IPR011006 CheY-like superfamily UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 Gene3D G3DSA:3.40.50.12740 2 209 1.6E-74 T 11-10-2018 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 SMART SM00448 2 115 1.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 Pfam PF00072 Response regulator receiver domain 4 115 1.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 SUPERFAMILY SSF46894 138 209 4.08E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 1.2E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_19370 12e4965f8856a1480333d2bfdfd1e8a8 213 SMART SM00421 146 203 1.3E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 Gene3D G3DSA:3.30.70.1050 1 116 2.5E-31 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 PIRSF PIRSF003095 1 430 2.7E-133 T 11-10-2018 IPR005215 Trigger factor GO:0015031 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 SUPERFAMILY SSF109998 250 428 2.75E-41 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily UP17_17700 77b0444664b72f1d6334ff7223f93435 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 1.5E-42 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 239 4.4E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain UP17_17700 77b0444664b72f1d6334ff7223f93435 430 SUPERFAMILY SSF102735 1 128 5.89E-40 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 1.3E-45 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 Gene3D G3DSA:3.10.50.40 151 248 3.2E-92 T 11-10-2018 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 SUPERFAMILY SSF54534 89 243 4.71E-38 T 11-10-2018 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 Gene3D G3DSA:1.10.3120.10 117 425 3.2E-92 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 TIGRFAM TIGR00115 tig: trigger factor 12 421 2.6E-137 T 11-10-2018 IPR005215 Trigger factor GO:0015031 UP17_17700 77b0444664b72f1d6334ff7223f93435 430 Hamap MF_00303 Trigger factor [tig]. 1 427 23.607 T 11-10-2018 IPR005215 Trigger factor GO:0015031 UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 121 4.1E-56 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 PIRSF PIRSF006614 1 140 1.0E-60 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 61 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 Gene3D G3DSA:3.40.50.1380 1 140 8.3E-55 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 Pfam PF02142 MGS-like domain 15 107 1.4E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 SMART SM00851 14 107 4.4E-22 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 33.372 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 UP17_15290 3aed2bd767d2b88415d920e54e5b8e28 141 SUPERFAMILY SSF52335 1 133 6.93E-50 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily UP17_16995 c196d43f70d11f952896df470f9b17e2 378 Pfam PF02618 YceG-like family 71 372 1.9E-80 T 11-10-2018 IPR003770 Endolytic murein transglycosylase UP17_16995 c196d43f70d11f952896df470f9b17e2 378 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 30 377 7.8E-102 T 11-10-2018 IPR003770 Endolytic murein transglycosylase UP17_16995 c196d43f70d11f952896df470f9b17e2 378 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 33 378 33.033 T 11-10-2018 IPR003770 Endolytic murein transglycosylase UP17_16995 c196d43f70d11f952896df470f9b17e2 378 Gene3D G3DSA:1.10.8.1150 66 140 1.1E-24 T 11-10-2018 UP17_04585 6fde38f84d45f4839a8f8af32ba6a9ab 278 Pfam PF09323 Domain of unknown function (DUF1980) 3 183 8.7E-53 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 UP17_04585 6fde38f84d45f4839a8f8af32ba6a9ab 278 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 20 273 1.0E-56 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 UP17_06540 4542cd51f842f85ce04b60f2060f5318 270 Pfam PF03575 Peptidase family S51 6 209 2.7E-25 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 UP17_06540 4542cd51f842f85ce04b60f2060f5318 270 Gene3D G3DSA:3.40.50.880 2 266 2.9E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_06540 4542cd51f842f85ce04b60f2060f5318 270 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 6 255 1.4E-72 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 UP17_06540 4542cd51f842f85ce04b60f2060f5318 270 SUPERFAMILY SSF52317 6 219 4.16E-23 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_06540 4542cd51f842f85ce04b60f2060f5318 270 PIRSF PIRSF032067 2 268 2.4E-56 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 UP17_16850 370ba3fbb49123e73eb50b0287fbdd7d 118 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 5.7E-26 T 11-10-2018 UP17_16850 370ba3fbb49123e73eb50b0287fbdd7d 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.008 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS UP17_16850 370ba3fbb49123e73eb50b0287fbdd7d 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 104 1.1E-35 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS UP17_16850 370ba3fbb49123e73eb50b0287fbdd7d 118 Gene3D G3DSA:3.30.460.10 1 108 1.6E-38 T 11-10-2018 UP17_16850 370ba3fbb49123e73eb50b0287fbdd7d 118 SUPERFAMILY SSF81301 1 114 9.97E-40 T 11-10-2018 UP17_25115 30c6acbb76d454edaaf2c153a8b6d2d5 141 Gene3D G3DSA:3.30.530.20 5 141 1.6E-40 T 11-10-2018 IPR023393 START-like domain superfamily UP17_25115 30c6acbb76d454edaaf2c153a8b6d2d5 141 SUPERFAMILY SSF55961 3 138 6.02E-34 T 11-10-2018 UP17_25115 30c6acbb76d454edaaf2c153a8b6d2d5 141 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 137 1.3E-23 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_25080 645f45ff736bac8f96a29fc4118f0271 320 PIRSF PIRSF000196 10 313 6.0E-94 T 11-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 UP17_25080 645f45ff736bac8f96a29fc4118f0271 320 SUPERFAMILY SSF51730 46 310 3.45E-49 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like UP17_25080 645f45ff736bac8f96a29fc4118f0271 320 Gene3D G3DSA:3.20.20.530 33 311 3.8E-62 T 11-10-2018 UP17_25080 645f45ff736bac8f96a29fc4118f0271 320 Pfam PF01619 Proline dehydrogenase 55 296 1.4E-18 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 UP17_06160 0f9a356800c0f6383b34aaed94e1b575 142 Gene3D G3DSA:3.40.630.30 1 140 1.8E-41 T 11-10-2018 UP17_06160 0f9a356800c0f6383b34aaed94e1b575 142 SUPERFAMILY SSF55729 3 140 2.44E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_06160 0f9a356800c0f6383b34aaed94e1b575 142 Pfam PF13673 Acetyltransferase (GNAT) domain 21 140 1.1E-20 T 11-10-2018 IPR000182 GNAT domain UP17_20940 fff3b5eb8aa791a7b9c7e4be1fb86161 146 Pfam PF07486 Cell Wall Hydrolase 24 133 3.9E-16 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 UP17_20940 fff3b5eb8aa791a7b9c7e4be1fb86161 146 Gene3D G3DSA:1.10.10.2520 8 96 3.4E-10 T 11-10-2018 UP17_07895 f70013e963b8ae588a6ab7402696df08 151 SMART SM00260 2 139 1.1E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 UP17_07895 f70013e963b8ae588a6ab7402696df08 151 SUPERFAMILY SSF50341 5 140 8.24E-35 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 UP17_07895 f70013e963b8ae588a6ab7402696df08 151 Gene3D G3DSA:2.30.30.40 8 133 6.7E-40 T 11-10-2018 UP17_07895 f70013e963b8ae588a6ab7402696df08 151 Gene3D G3DSA:2.40.50.180 25 134 6.7E-40 T 11-10-2018 UP17_07895 f70013e963b8ae588a6ab7402696df08 151 Pfam PF01584 CheW-like domain 7 140 4.6E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 UP17_19560 8f09085c7e50844352d28f6684ff6107 300 SUPERFAMILY SSF46785 1 85 9.99E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_19560 8f09085c7e50844352d28f6684ff6107 300 Gene3D G3DSA:3.40.190.290 93 296 1.6E-48 T 11-10-2018 UP17_19560 8f09085c7e50844352d28f6684ff6107 300 Gene3D G3DSA:1.10.10.10 1 85 4.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19560 8f09085c7e50844352d28f6684ff6107 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_19560 8f09085c7e50844352d28f6684ff6107 300 SUPERFAMILY SSF53850 90 291 1.85E-35 T 11-10-2018 UP17_19560 8f09085c7e50844352d28f6684ff6107 300 Pfam PF03466 LysR substrate binding domain 98 288 1.5E-36 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_19560 8f09085c7e50844352d28f6684ff6107 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_19560 8f09085c7e50844352d28f6684ff6107 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_19560 8f09085c7e50844352d28f6684ff6107 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_02915 3947a93043502d67e1bf970311ad6443 500 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 4 492 54.007 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 UP17_02915 3947a93043502d67e1bf970311ad6443 500 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 7 492 2.1E-239 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 UP17_02915 3947a93043502d67e1bf970311ad6443 500 SUPERFAMILY SSF51905 6 325 1.86E-21 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_02915 3947a93043502d67e1bf970311ad6443 500 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 8 490 2.7E-220 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 UP17_14245 97c8d7f88c901ebe455b6ef6ae3b958e 313 PIRSF PIRSF000292 1 309 1.7E-93 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 UP17_14245 97c8d7f88c901ebe455b6ef6ae3b958e 313 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 11 236 3.8E-78 T 11-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 UP17_14245 97c8d7f88c901ebe455b6ef6ae3b958e 313 SUPERFAMILY SSF81464 15 108 2.13E-15 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14245 97c8d7f88c901ebe455b6ef6ae3b958e 313 SUPERFAMILY SSF49503 122 266 9.56E-38 T 11-10-2018 IPR008972 Cupredoxin UP17_14245 97c8d7f88c901ebe455b6ef6ae3b958e 313 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 32 105 7.2E-5 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14245 97c8d7f88c901ebe455b6ef6ae3b958e 313 Gene3D G3DSA:2.60.40.420 111 267 3.8E-36 T 11-10-2018 IPR008972 Cupredoxin UP17_14245 97c8d7f88c901ebe455b6ef6ae3b958e 313 Gene3D G3DSA:1.10.287.90 24 110 1.1E-21 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_03810 8ed79a8146de9d257af81dabfe856679 84 Pfam PF14182 YgaB-like protein 3 78 1.1E-29 T 11-10-2018 IPR025572 YgaB-like protein UP17_09055 d81e3fc7f851d25a431acc505f4f51a3 447 Pfam PF00149 Calcineurin-like phosphoesterase 161 331 6.6E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_09055 d81e3fc7f851d25a431acc505f4f51a3 447 SUPERFAMILY SSF56300 158 408 1.73E-19 T 11-10-2018 UP17_09055 d81e3fc7f851d25a431acc505f4f51a3 447 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 26 131 1.2E-12 T 11-10-2018 UP17_09055 d81e3fc7f851d25a431acc505f4f51a3 447 Gene3D G3DSA:2.60.120.200 13 155 1.9E-13 T 11-10-2018 UP17_09055 d81e3fc7f851d25a431acc505f4f51a3 447 SUPERFAMILY SSF49899 25 131 7.39E-14 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily UP17_09055 d81e3fc7f851d25a431acc505f4f51a3 447 Gene3D G3DSA:3.60.21.10 160 403 3.8E-9 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_17885 029cb997192901f7bbed4752b89084e6 104 Pfam PF00085 Thioredoxin 4 103 1.2E-31 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 UP17_17885 029cb997192901f7bbed4752b89084e6 104 SUPERFAMILY SSF52833 3 103 5.73E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_17885 029cb997192901f7bbed4752b89084e6 104 PRINTS PR00421 Thioredoxin family signature 28 37 5.4E-9 T 11-10-2018 UP17_17885 029cb997192901f7bbed4752b89084e6 104 PRINTS PR00421 Thioredoxin family signature 20 28 5.4E-9 T 11-10-2018 UP17_17885 029cb997192901f7bbed4752b89084e6 104 PRINTS PR00421 Thioredoxin family signature 68 79 5.4E-9 T 11-10-2018 UP17_17885 029cb997192901f7bbed4752b89084e6 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 UP17_17885 029cb997192901f7bbed4752b89084e6 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 103 8.2E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 UP17_17885 029cb997192901f7bbed4752b89084e6 104 Gene3D G3DSA:3.40.30.10 1 104 3.5E-36 T 11-10-2018 UP17_17885 029cb997192901f7bbed4752b89084e6 104 PIRSF PIRSF000077 1 104 1.0E-41 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 UP17_21530 c0f3a5632da43adaf1c05a7057b84f44 218 Gene3D G3DSA:3.30.70.1450 139 216 2.0E-25 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_21530 c0f3a5632da43adaf1c05a7057b84f44 218 Gene3D G3DSA:3.40.50.720 1 138 1.2E-36 T 11-10-2018 UP17_21530 c0f3a5632da43adaf1c05a7057b84f44 218 SUPERFAMILY SSF116726 133 216 3.01E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_21530 c0f3a5632da43adaf1c05a7057b84f44 218 Pfam PF02080 TrkA-C domain 158 216 1.4E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UP17_21530 c0f3a5632da43adaf1c05a7057b84f44 218 SUPERFAMILY SSF51735 5 137 7.88E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_21530 c0f3a5632da43adaf1c05a7057b84f44 218 Pfam PF02254 TrkA-N domain 6 121 1.3E-28 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 UP17_06440 6aabf77cdb3857a6582fadad7b48a0b2 268 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 256 3.6E-108 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06440 6aabf77cdb3857a6582fadad7b48a0b2 268 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 9.0E-99 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 UP17_06440 6aabf77cdb3857a6582fadad7b48a0b2 268 Gene3D G3DSA:3.40.1190.20 1 267 1.6E-106 T 11-10-2018 IPR029056 Ribokinase-like UP17_06440 6aabf77cdb3857a6582fadad7b48a0b2 268 SUPERFAMILY SSF53613 1 259 7.64E-82 T 11-10-2018 IPR029056 Ribokinase-like UP17_02605 88e02e3a7dd60b3635db5013a57f09e1 489 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 486 2.6E-220 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 UP17_02605 88e02e3a7dd60b3635db5013a57f09e1 489 Gene3D G3DSA:1.20.1730.10 21 488 4.0E-103 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_02605 88e02e3a7dd60b3635db5013a57f09e1 489 Pfam PF00474 Sodium:solute symporter family 33 433 1.7E-115 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_02605 88e02e3a7dd60b3635db5013a57f09e1 489 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 433 2.8E-103 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_02605 88e02e3a7dd60b3635db5013a57f09e1 489 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 415 435 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_21465 2bf51e764c751dd13cd4f2af19e2d248 287 Pfam PF00892 EamA-like transporter family 7 128 1.6E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_21465 2bf51e764c751dd13cd4f2af19e2d248 287 Pfam PF00892 EamA-like transporter family 148 279 1.2E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_21465 2bf51e764c751dd13cd4f2af19e2d248 287 SUPERFAMILY SSF103481 183 282 8.5E-8 T 11-10-2018 UP17_21465 2bf51e764c751dd13cd4f2af19e2d248 287 SUPERFAMILY SSF103481 43 130 3.66E-8 T 11-10-2018 UP17_07305 bc7c3de491490f6d7de814e25c54db11 325 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 323 24.931 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_07305 bc7c3de491490f6d7de814e25c54db11 325 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_07305 bc7c3de491490f6d7de814e25c54db11 325 ProSitePatterns PS01348 MraY family signature 2. 169 180 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_07305 bc7c3de491490f6d7de814e25c54db11 325 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 324 3.3E-123 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_07305 bc7c3de491490f6d7de814e25c54db11 325 Pfam PF00953 Glycosyl transferase family 4 83 249 2.9E-41 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 UP17_24080 4bbee0cc6507885ff95c609280f0e179 80 Pfam PF06612 Protein of unknown function (DUF1146) 17 64 1.3E-20 T 11-10-2018 IPR009526 Protein of unknown function DUF1146 UP17_24080 4bbee0cc6507885ff95c609280f0e179 80 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 13 77 1.1E-22 T 11-10-2018 IPR009526 Protein of unknown function DUF1146 UP17_10530 15ed7d370e773b6baaf4eb6ae5a7a5ab 257 Gene3D G3DSA:3.90.850.10 2 255 7.0E-63 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_10530 15ed7d370e773b6baaf4eb6ae5a7a5ab 257 SUPERFAMILY SSF56529 4 255 1.96E-52 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 7 330 8.4E-142 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 Gene3D G3DSA:3.40.50.720 129 297 1.7E-120 T 11-10-2018 UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 SUPERFAMILY SSF50129 5 148 1.83E-41 T 11-10-2018 IPR011032 GroES-like superfamily UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 SMART SM00829 16 328 7.2E-7 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 2.4E-5 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 Gene3D G3DSA:3.90.180.10 20 329 1.7E-120 T 11-10-2018 UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 SUPERFAMILY SSF51735 119 296 3.81E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_22530 b6dceaae4bab7ea0530a0ce82e80485b 330 Pfam PF00107 Zinc-binding dehydrogenase 162 275 1.9E-14 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_20185 c458ea718aa38a0c7f6a808528bca402 243 Pfam PF00072 Response regulator receiver domain 8 116 4.4E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20185 c458ea718aa38a0c7f6a808528bca402 243 SUPERFAMILY SSF52172 5 126 1.12E-28 T 11-10-2018 IPR011006 CheY-like superfamily UP17_20185 c458ea718aa38a0c7f6a808528bca402 243 SMART SM00448 5 116 4.0E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20185 c458ea718aa38a0c7f6a808528bca402 243 SMART SM00850 144 242 9.2E-34 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_20185 c458ea718aa38a0c7f6a808528bca402 243 Gene3D G3DSA:3.40.50.2300 1 128 2.0E-30 T 11-10-2018 UP17_20185 c458ea718aa38a0c7f6a808528bca402 243 Gene3D G3DSA:2.40.50.40 135 204 2.0E-11 T 11-10-2018 UP17_20185 c458ea718aa38a0c7f6a808528bca402 243 Pfam PF04397 LytTr DNA-binding domain 145 241 8.9E-27 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 UP17_08090 b19374ef0f5897e89384261b66084e25 776 SMART SM00382 446 628 7.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_08090 b19374ef0f5897e89384261b66084e25 776 Gene3D G3DSA:3.40.50.300 408 693 3.3E-111 T 11-10-2018 UP17_08090 b19374ef0f5897e89384261b66084e25 776 SUPERFAMILY SSF46785 703 769 4.08E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_08090 b19374ef0f5897e89384261b66084e25 776 SMART SM00843 703 768 1.2E-38 T 11-10-2018 IPR018541 FtsK gamma domain UP17_08090 b19374ef0f5897e89384261b66084e25 776 SUPERFAMILY SSF52540 384 678 2.83E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08090 b19374ef0f5897e89384261b66084e25 776 Pfam PF01580 FtsK/SpoIIIE family 411 607 7.0E-66 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 UP17_08090 b19374ef0f5897e89384261b66084e25 776 Pfam PF09397 Ftsk gamma domain 706 766 1.1E-28 T 11-10-2018 IPR018541 FtsK gamma domain UP17_08090 b19374ef0f5897e89384261b66084e25 776 Gene3D G3DSA:1.10.10.10 707 770 7.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08090 b19374ef0f5897e89384261b66084e25 776 Gene3D G3DSA:3.30.980.40 303 406 4.7E-37 T 11-10-2018 UP17_24470 dd8e6d72f18b6342db8a30761c263280 154 Gene3D G3DSA:3.90.1170.40 1 144 9.7E-54 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 UP17_24470 dd8e6d72f18b6342db8a30761c263280 154 SUPERFAMILY SSF54690 3 136 1.96E-46 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 UP17_24470 dd8e6d72f18b6342db8a30761c263280 154 Pfam PF02391 MoaE protein 5 116 1.5E-36 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 UP17_23005 2568f5108a26ca189f162d6bb834d04c 78 Hamap MF_01542 UPF0349 protein . 1 77 28.469 T 11-10-2018 IPR022916 Protein of unknown function UPF0349 UP17_23005 2568f5108a26ca189f162d6bb834d04c 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 77 1.0E-25 T 11-10-2018 UP17_23005 2568f5108a26ca189f162d6bb834d04c 78 Pfam PF07293 Protein of unknown function (DUF1450) 1 74 6.0E-35 T 11-10-2018 IPR009910 Protein of unknown function DUF1450 UP17_03345 56aa4892aca9a72c76f57552208934d0 152 SMART SM00988 6 72 1.2E-14 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal UP17_03345 56aa4892aca9a72c76f57552208934d0 152 SUPERFAMILY SSF69287 1 76 4.05E-18 T 11-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily UP17_03345 56aa4892aca9a72c76f57552208934d0 152 Pfam PF02814 UreE urease accessory protein, N-terminal domain 17 72 2.1E-17 T 11-10-2018 IPR004029 UreE urease accessory, N-terminal UP17_03345 56aa4892aca9a72c76f57552208934d0 152 PIRSF PIRSF036402 1 152 3.4E-46 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 UP17_03345 56aa4892aca9a72c76f57552208934d0 152 Pfam PF05194 UreE urease accessory protein, C-terminal domain 80 141 6.5E-9 T 11-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 UP17_03345 56aa4892aca9a72c76f57552208934d0 152 Gene3D G3DSA:3.30.70.790 78 150 2.0E-30 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 UP17_03345 56aa4892aca9a72c76f57552208934d0 152 SUPERFAMILY SSF69737 79 145 2.49E-17 T 11-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 UP17_03345 56aa4892aca9a72c76f57552208934d0 152 Gene3D G3DSA:2.60.260.20 1 76 2.1E-21 T 11-10-2018 UP17_03345 56aa4892aca9a72c76f57552208934d0 152 Hamap MF_00822 Urease accessory protein UreE [ureE]. 1 150 22.496 T 11-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 UP17_01410 ac5ecc2b9dcbc42f18bfc29aeb076948 110 Gene3D G3DSA:3.30.750.24 2 110 1.9E-27 T 11-10-2018 IPR036513 STAS domain superfamily UP17_01410 ac5ecc2b9dcbc42f18bfc29aeb076948 110 Pfam PF01740 STAS domain 5 100 7.3E-21 T 11-10-2018 IPR002645 STAS domain UP17_01410 ac5ecc2b9dcbc42f18bfc29aeb076948 110 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 3.7E-34 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 UP17_01410 ac5ecc2b9dcbc42f18bfc29aeb076948 110 SUPERFAMILY SSF52091 4 108 3.34E-27 T 11-10-2018 IPR036513 STAS domain superfamily UP17_10085 239b82c4be5322c1410ec8b1a8b6a7d5 428 Gene3D G3DSA:1.20.1250.20 219 422 4.5E-21 T 11-10-2018 UP17_10085 239b82c4be5322c1410ec8b1a8b6a7d5 428 SUPERFAMILY SSF103473 7 418 1.7E-49 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_10085 239b82c4be5322c1410ec8b1a8b6a7d5 428 Gene3D G3DSA:1.20.1250.20 5 199 7.4E-22 T 11-10-2018 UP17_10085 239b82c4be5322c1410ec8b1a8b6a7d5 428 Pfam PF07690 Major Facilitator Superfamily 34 372 3.8E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_15990 23ffe33fefcae1e22c9734c47523d2ae 445 Pfam PF13751 Transposase DDE domain 317 434 8.0E-28 T 11-10-2018 IPR025668 Transposase DDE domain UP17_15990 23ffe33fefcae1e22c9734c47523d2ae 445 Pfam PF05598 Transposase domain (DUF772) 52 127 3.5E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.374 T 11-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 9.1E-71 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.362 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 Pfam PF01709 Transcriptional regulator 4 235 2.9E-81 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 Gene3D G3DSA:3.30.70.980 83 234 6.9E-45 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 Gene3D G3DSA:3.30.70.980 131 201 6.9E-45 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 SUPERFAMILY SSF75625 1 238 3.4E-79 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_21865 8c3b9e7157def61d5a82d0499a36df1f 239 Gene3D G3DSA:1.10.10.200 2 79 1.8E-24 T 11-10-2018 IPR017856 Integrase-like, N-terminal UP17_00335 835e6afed87239673c32aab9364a333c 490 Gene3D G3DSA:1.10.287.1080 358 489 2.0E-42 T 11-10-2018 UP17_00335 835e6afed87239673c32aab9364a333c 490 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 254 327 5.0E-27 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core UP17_00335 835e6afed87239673c32aab9364a333c 490 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 396 455 2.0E-9 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core UP17_00335 835e6afed87239673c32aab9364a333c 490 PIRSF PIRSF002845 1 489 9.1E-215 T 11-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted UP17_00335 835e6afed87239673c32aab9364a333c 490 TIGRFAM TIGR00444 mazG: MazG family protein 238 486 2.5E-99 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG UP17_00335 835e6afed87239673c32aab9364a333c 490 SUPERFAMILY SSF101386 231 332 1.45E-23 T 11-10-2018 UP17_00335 835e6afed87239673c32aab9364a333c 490 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 205 4.3E-18 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_00335 835e6afed87239673c32aab9364a333c 490 SUPERFAMILY SSF101386 366 463 8.97E-23 T 11-10-2018 UP17_00335 835e6afed87239673c32aab9364a333c 490 Gene3D G3DSA:1.10.287.1080 228 351 1.5E-41 T 11-10-2018 UP17_00335 835e6afed87239673c32aab9364a333c 490 SUPERFAMILY SSF53790 4 256 4.8E-26 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_00335 835e6afed87239673c32aab9364a333c 490 Gene3D G3DSA:3.40.1010.10 4 114 1.1E-7 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_05765 b5d7fc1050af22530c5b0c131c2e5222 114 Pfam PF07457 Protein of unknown function (DUF1516) 3 104 6.6E-32 T 11-10-2018 IPR010899 Protein of unknown function UPF0344 UP17_05765 b5d7fc1050af22530c5b0c131c2e5222 114 Hamap MF_01536 UPF0344 protein . 2 114 15.159 T 11-10-2018 IPR010899 Protein of unknown function UPF0344 UP17_05765 b5d7fc1050af22530c5b0c131c2e5222 114 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 4 114 3.0E-23 T 11-10-2018 IPR010899 Protein of unknown function UPF0344 UP17_12065 5e8b3f3b3e5581d55a7aea5eb6e4c343 314 SUPERFAMILY SSF161098 36 308 6.17E-57 T 11-10-2018 IPR035906 MetI-like superfamily UP17_12065 5e8b3f3b3e5581d55a7aea5eb6e4c343 314 Gene3D G3DSA:1.10.3720.10 35 311 3.2E-56 T 11-10-2018 IPR035906 MetI-like superfamily UP17_12065 5e8b3f3b3e5581d55a7aea5eb6e4c343 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.6E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_18065 944f1cc3d3b4776168d1ee034d477049 164 Gene3D G3DSA:3.40.630.30 1 164 7.9E-38 T 11-10-2018 UP17_18065 944f1cc3d3b4776168d1ee034d477049 164 SUPERFAMILY SSF55729 1 164 5.06E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_18065 944f1cc3d3b4776168d1ee034d477049 164 Pfam PF00583 Acetyltransferase (GNAT) family 41 138 1.0E-18 T 11-10-2018 IPR000182 GNAT domain UP17_02345 97439a56972124ea83fc74ba3f7ba604 444 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 10 415 3.8E-134 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_02345 97439a56972124ea83fc74ba3f7ba604 444 Pfam PF05525 Branched-chain amino acid transport protein 3 428 2.6E-151 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_01370 acda350ea6f8abf48c23bb90c7280c6e 334 SUPERFAMILY SSF89392 27 203 2.0E-20 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX UP17_01370 acda350ea6f8abf48c23bb90c7280c6e 334 Gene3D G3DSA:2.50.20.10 27 209 2.0E-14 T 11-10-2018 UP17_14065 0f49b34ec5282f6847becc5639a04d2a 184 Pfam PF13302 Acetyltransferase (GNAT) domain 12 132 3.4E-13 T 11-10-2018 IPR000182 GNAT domain UP17_14065 0f49b34ec5282f6847becc5639a04d2a 184 Gene3D G3DSA:3.40.630.30 1 169 6.8E-20 T 11-10-2018 UP17_14065 0f49b34ec5282f6847becc5639a04d2a 184 SUPERFAMILY SSF55729 6 132 4.88E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_10430 1492922b90d3d38710c70e79824ca054 235 SUPERFAMILY SSF53790 4 234 4.58E-43 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_10430 1492922b90d3d38710c70e79824ca054 235 Gene3D G3DSA:3.30.950.10 134 235 2.3E-13 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 UP17_10430 1492922b90d3d38710c70e79824ca054 235 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 5 235 2.4E-82 T 11-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 UP17_10430 1492922b90d3d38710c70e79824ca054 235 Gene3D G3DSA:3.40.1010.10 4 133 9.6E-35 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_10430 1492922b90d3d38710c70e79824ca054 235 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 218 2.5E-47 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_10430 1492922b90d3d38710c70e79824ca054 235 PIRSF PIRSF036427 3 235 8.5E-76 T 11-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 UP17_11335 6be97a0383623fe74b93047f4ea59f19 414 Pfam PF00144 Beta-lactamase 22 393 1.5E-59 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_11335 6be97a0383623fe74b93047f4ea59f19 414 Gene3D G3DSA:3.40.710.10 2 414 6.9E-104 T 11-10-2018 UP17_11335 6be97a0383623fe74b93047f4ea59f19 414 SUPERFAMILY SSF56601 18 409 3.65E-78 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_10355 85323af54241faaab173361d8d5bb3da 207 Pfam PF02417 Chromate transporter 9 171 3.8E-41 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 UP17_21575 dae168324a366b63bb1f5556411ff09a 323 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 1 320 1.2E-134 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 UP17_21575 dae168324a366b63bb1f5556411ff09a 323 SUPERFAMILY SSF51735 2 320 5.98E-96 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_21575 dae168324a366b63bb1f5556411ff09a 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 251 1.1E-56 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 UP17_21575 dae168324a366b63bb1f5556411ff09a 323 Gene3D G3DSA:3.90.25.10 183 318 6.0E-124 T 11-10-2018 UP17_21575 dae168324a366b63bb1f5556411ff09a 323 Gene3D G3DSA:3.40.50.720 2 263 6.0E-124 T 11-10-2018 UP17_09300 cbd41995d9b206f1c7917047011fd99a 218 Gene3D G3DSA:3.40.50.1390 1 156 3.4E-26 T 11-10-2018 UP17_09300 cbd41995d9b206f1c7917047011fd99a 218 SMART SM00857 3 149 8.7E-32 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 UP17_09300 cbd41995d9b206f1c7917047011fd99a 218 Pfam PF00239 Resolvase, N terminal domain 3 147 4.9E-24 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 UP17_09300 cbd41995d9b206f1c7917047011fd99a 218 SUPERFAMILY SSF53041 1 148 9.68E-25 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 Pfam PF03315 Serine dehydratase beta chain 5 131 3.4E-13 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 PIRSF PIRSF036692 1 220 1.3E-101 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 Gene3D G3DSA:3.30.70.260 139 217 2.5E-14 T 11-10-2018 UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 Gene3D G3DSA:3.30.1330.90 13 137 1.4E-21 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 SUPERFAMILY SSF55021 138 216 2.1E-16 T 11-10-2018 UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 SUPERFAMILY SSF143548 19 136 3.4E-32 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 Pfam PF01842 ACT domain 149 210 4.5E-9 T 11-10-2018 IPR002912 ACT domain UP17_21435 7272d6d46d471b0f37be494cc5c30876 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 1.7E-90 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 SUPERFAMILY SSF47203 227 378 4.03E-60 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 4.7E-45 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 6.7E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 376 1.9E-50 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 Gene3D G3DSA:1.10.540.10 1 120 6.0E-49 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 SUPERFAMILY SSF56645 2 242 1.96E-95 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 PIRSF PIRSF016578 2 119 5.0E-7 T 11-10-2018 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 PIRSF PIRSF016578 129 370 4.0E-10 T 11-10-2018 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 Gene3D G3DSA:2.40.110.10 121 234 4.1E-45 T 11-10-2018 UP17_24320 9b4df2480f4352e582bfdc92f4fd2379 379 Gene3D G3DSA:1.20.140.10 235 379 6.8E-57 T 11-10-2018 UP17_12210 5b96e41cd4beeac914cbfc00cbc2b3b2 312 SUPERFAMILY SSF51197 17 310 1.47E-69 T 11-10-2018 UP17_12210 5b96e41cd4beeac914cbfc00cbc2b3b2 312 Gene3D G3DSA:3.60.130.10 13 312 3.4E-101 T 11-10-2018 UP17_12210 5b96e41cd4beeac914cbfc00cbc2b3b2 312 Pfam PF08943 CsiD 18 310 1.4E-124 T 11-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 UP17_12210 5b96e41cd4beeac914cbfc00cbc2b3b2 312 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 23 310 1.0E-90 T 11-10-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 UP17_05185 4687378093385c108e26b252bb0a1e13 175 Gene3D G3DSA:3.40.50.620 2 175 3.6E-30 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_05185 4687378093385c108e26b252bb0a1e13 175 Pfam PF00582 Universal stress protein family 85 174 5.8E-17 T 11-10-2018 IPR006016 UspA UP17_05185 4687378093385c108e26b252bb0a1e13 175 Pfam PF00582 Universal stress protein family 6 46 4.2E-8 T 11-10-2018 IPR006016 UspA UP17_05185 4687378093385c108e26b252bb0a1e13 175 PRINTS PR01438 Universal stress protein signature 135 147 4.3E-14 T 11-10-2018 IPR006015 Universal stress protein A UP17_05185 4687378093385c108e26b252bb0a1e13 175 PRINTS PR01438 Universal stress protein signature 5 23 4.3E-14 T 11-10-2018 IPR006015 Universal stress protein A UP17_05185 4687378093385c108e26b252bb0a1e13 175 PRINTS PR01438 Universal stress protein signature 153 175 4.3E-14 T 11-10-2018 IPR006015 Universal stress protein A UP17_05185 4687378093385c108e26b252bb0a1e13 175 SUPERFAMILY SSF52402 6 175 2.43E-24 T 11-10-2018 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 941 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 Pfam PF02779 Transketolase, pyrimidine binding domain 597 794 2.4E-54 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 Gene3D G3DSA:3.40.50.12470 556 816 8.2E-151 T 11-10-2018 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 Pfam PF00676 Dehydrogenase E1 component 223 531 2.5E-72 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 799 941 1.3E-39 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 SMART SM00861 598 794 5.4E-43 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 PIRSF PIRSF000157 2 944 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 Gene3D G3DSA:3.40.50.11610 734 940 8.2E-151 T 11-10-2018 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 SUPERFAMILY SSF52518 581 799 1.47E-39 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 SUPERFAMILY SSF52518 153 540 1.84E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 2 944 22.516 T 11-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 UP17_13990 5cf325ffe132a8c1e918cf17544abf96 950 Gene3D G3DSA:3.40.50.970 156 538 8.9E-129 T 11-10-2018 UP17_15745 4d29a2117d396f6180cdb1f692446d8d 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 36.188 T 11-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 UP17_15745 4d29a2117d396f6180cdb1f692446d8d 146 SUPERFAMILY SSF55874 28 134 1.57E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_15745 4d29a2117d396f6180cdb1f692446d8d 146 Gene3D G3DSA:3.30.565.10 1 142 1.5E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_15745 4d29a2117d396f6180cdb1f692446d8d 146 Pfam PF13581 Histidine kinase-like ATPase domain 10 136 1.1E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_15745 4d29a2117d396f6180cdb1f692446d8d 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 2.4E-71 T 11-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 UP17_15745 4d29a2117d396f6180cdb1f692446d8d 146 SMART SM00387 35 140 7.6E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 Gene3D G3DSA:1.10.287.80 6 281 1.7E-102 T 11-10-2018 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 Gene3D G3DSA:3.40.1380.10 61 204 1.7E-102 T 11-10-2018 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 271 284 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 285 4.7E-110 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 Pfam PF00231 ATP synthase 3 285 5.1E-98 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 SUPERFAMILY SSF52943 2 285 5.62E-92 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 PRINTS PR00126 ATP synthase gamma subunit signature 232 251 6.1E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 6.1E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 PRINTS PR00126 ATP synthase gamma subunit signature 263 284 6.1E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 6.1E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24150 821de96adba96d7c7bc798407e9eb0ae 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 285 35.371 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 SMART SM00636 165 462 1.3E-11 T 11-10-2018 IPR011583 Chitinase II GO:0008061 UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 SUPERFAMILY SSF54106 93 137 2.49E-11 T 11-10-2018 UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 SMART SM00257 94 137 1.5E-15 T 11-10-2018 IPR018392 LysM domain UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 SMART SM00257 46 89 3.4E-14 T 11-10-2018 IPR018392 LysM domain UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 Gene3D G3DSA:3.10.50.10 375 433 2.4E-77 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 Gene3D G3DSA:3.20.20.80 187 467 2.4E-77 T 11-10-2018 UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 Pfam PF01476 LysM domain 47 89 1.9E-12 T 11-10-2018 IPR018392 LysM domain UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 Pfam PF01476 LysM domain 95 137 4.9E-15 T 11-10-2018 IPR018392 LysM domain UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 Gene3D G3DSA:3.10.350.10 44 91 7.6E-15 T 11-10-2018 IPR036779 LysM domain superfamily UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 SUPERFAMILY SSF54106 45 89 3.79E-10 T 11-10-2018 UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 Pfam PF00704 Glycosyl hydrolases family 18 210 460 7.8E-28 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 Gene3D G3DSA:3.10.350.10 92 141 1.7E-16 T 11-10-2018 IPR036779 LysM domain superfamily UP17_20800 c203e29622ba72298f95b1ab1c2f3b95 472 SUPERFAMILY SSF51445 167 469 5.97E-42 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_06430 60e8ca230f148c9cd4a7e3dde50f154e 210 Pfam PF02581 Thiamine monophosphate synthase 10 189 5.9E-63 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06430 60e8ca230f148c9cd4a7e3dde50f154e 210 Gene3D G3DSA:3.20.20.70 1 210 4.3E-69 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_06430 60e8ca230f148c9cd4a7e3dde50f154e 210 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 199 5.0E-65 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06430 60e8ca230f148c9cd4a7e3dde50f154e 210 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 207 27.631 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06430 60e8ca230f148c9cd4a7e3dde50f154e 210 SUPERFAMILY SSF51391 6 207 1.27E-63 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_23285 35ea46857e14b49b52591b0b0b1bbfdc 252 SUPERFAMILY SSF52540 2 226 2.03E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23285 35ea46857e14b49b52591b0b0b1bbfdc 252 Pfam PF00005 ABC transporter 18 164 1.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_23285 35ea46857e14b49b52591b0b0b1bbfdc 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23285 35ea46857e14b49b52591b0b0b1bbfdc 252 Gene3D G3DSA:3.40.50.300 1 251 6.2E-69 T 11-10-2018 UP17_23285 35ea46857e14b49b52591b0b0b1bbfdc 252 SMART SM00382 26 213 9.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Gene3D G3DSA:3.40.120.10 325 452 5.5E-37 T 11-10-2018 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 SUPERFAMILY SSF53738 304 454 2.08E-33 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Gene3D G3DSA:3.40.120.10 209 324 4.4E-23 T 11-10-2018 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 3.7E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Gene3D G3DSA:3.30.310.50 476 567 2.4E-8 T 11-10-2018 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 SUPERFAMILY SSF53738 210 316 2.04E-20 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 501 561 7.0E-10 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Gene3D G3DSA:3.40.120.10 33 190 6.4E-47 T 11-10-2018 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 SUPERFAMILY SSF55957 447 574 1.44E-14 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 SUPERFAMILY SSF53738 31 220 2.12E-46 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 444 2.4E-23 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_21585 d309747152b2650fb92ab459afc1ea0d 580 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 315 1.9E-25 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 UP17_18085 3fd53c687fa7c529bd7953f51a606d22 472 Pfam PF07261 Replication initiation and membrane attachment 328 393 8.6E-7 T 11-10-2018 IPR006343 DnaD domain UP17_18200 fa8fef970e1299650fd3d932d845773d 332 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 8.5E-64 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 Gene3D G3DSA:3.90.226.10 2 317 1.8E-122 T 11-10-2018 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 SUPERFAMILY SSF52096 6 315 1.8E-99 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_18200 fa8fef970e1299650fd3d932d845773d 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 315 5.8E-153 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18200 fa8fef970e1299650fd3d932d845773d 332 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 49.562 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 13 188 1.0E-46 T 11-10-2018 IPR023635 Peptide deformylase UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 Hamap MF_00163 Peptide deformylase [def]. 11 190 28.631 T 11-10-2018 IPR023635 Peptide deformylase UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 Gene3D G3DSA:3.90.45.10 9 191 1.1E-64 T 11-10-2018 IPR036821 Peptide deformylase superfamily UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 SUPERFAMILY SSF56420 5 187 5.36E-60 T 11-10-2018 IPR036821 Peptide deformylase superfamily UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 PIRSF PIRSF004749 3 191 1.1E-49 T 11-10-2018 IPR023635 Peptide deformylase UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 PRINTS PR01576 Peptide deformylase signature 116 127 6.0E-31 T 11-10-2018 IPR023635 Peptide deformylase UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 PRINTS PR01576 Peptide deformylase signature 55 84 6.0E-31 T 11-10-2018 IPR023635 Peptide deformylase UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 PRINTS PR01576 Peptide deformylase signature 148 177 6.0E-31 T 11-10-2018 IPR023635 Peptide deformylase UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 PRINTS PR01576 Peptide deformylase signature 129 147 6.0E-31 T 11-10-2018 IPR023635 Peptide deformylase UP17_01190 a2a1e8c44d5845dfaed85e27842e2a3e 192 Pfam PF01327 Polypeptide deformylase 12 179 1.9E-47 T 11-10-2018 IPR023635 Peptide deformylase UP17_04845 6baf25fc92536bee2f37da84213639fc 541 Gene3D G3DSA:3.10.310.70 82 201 7.4E-128 T 11-10-2018 UP17_04845 6baf25fc92536bee2f37da84213639fc 541 Gene3D G3DSA:2.30.40.10 13 509 7.4E-128 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_04845 6baf25fc92536bee2f37da84213639fc 541 Gene3D G3DSA:3.20.20.140 63 492 7.4E-128 T 11-10-2018 UP17_04845 6baf25fc92536bee2f37da84213639fc 541 SUPERFAMILY SSF51556 62 493 5.87E-33 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_04845 6baf25fc92536bee2f37da84213639fc 541 SUPERFAMILY SSF51338 4 539 6.84E-19 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_04845 6baf25fc92536bee2f37da84213639fc 541 Pfam PF07969 Amidohydrolase family 51 533 7.3E-94 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_05435 849b188e3e133cf756695f53e031edfc 84 Pfam PF11132 Transcriptional regulator protein (SplA) 6 77 1.5E-33 T 11-10-2018 IPR022608 Transcription regulator SplA UP17_05435 849b188e3e133cf756695f53e031edfc 84 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 10 79 7.0E-14 T 11-10-2018 UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 PIRSF PIRSF006230 1 283 4.6E-105 T 11-10-2018 IPR016478 GTPase, MTG1 UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 SUPERFAMILY SSF52540 9 192 5.54E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 1.6E-116 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 Gene3D G3DSA:3.40.50.300 12 179 3.7E-50 T 11-10-2018 UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 Gene3D G3DSA:1.10.1580.10 180 272 3.6E-28 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 123 143 9.0E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 169 184 9.0E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_07675 1a2ce3e65c2447a13956e85d5e7b33dd 290 Pfam PF01926 50S ribosome-binding GTPase 123 205 7.4E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 UP17_10950 29d712f1515398e84b2d4d0ec0ddcce8 319 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 178 300 5.7E-22 T 11-10-2018 UP17_10950 29d712f1515398e84b2d4d0ec0ddcce8 319 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 135 1.8E-18 T 11-10-2018 UP17_10950 29d712f1515398e84b2d4d0ec0ddcce8 319 SUPERFAMILY SSF54593 9 151 5.64E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_10950 29d712f1515398e84b2d4d0ec0ddcce8 319 SUPERFAMILY SSF54593 171 317 6.19E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_10950 29d712f1515398e84b2d4d0ec0ddcce8 319 Gene3D G3DSA:3.10.180.10 1 151 4.0E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_10950 29d712f1515398e84b2d4d0ec0ddcce8 319 Gene3D G3DSA:3.10.180.10 162 317 2.0E-37 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 Gene3D G3DSA:3.30.70.260 1 80 2.4E-32 T 11-10-2018 UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 Pfam PF01842 ACT domain 4 68 2.9E-17 T 11-10-2018 IPR002912 ACT domain UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 SUPERFAMILY SSF55021 4 77 8.56E-22 T 11-10-2018 UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 SUPERFAMILY SSF55021 80 161 4.73E-26 T 11-10-2018 UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 5.7E-64 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 9.0E-22 T 11-10-2018 UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 Gene3D G3DSA:3.30.70.1150 84 163 7.8E-29 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal UP17_17735 d8cc64b39154cb6c8e6fe780bb8c825c 170 Pfam PF10369 Small subunit of acetolactate synthase 85 158 1.7E-28 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 513 527 2.2E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 2.2E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 306 315 2.2E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 388 404 2.2E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 2.2E-27 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 Pfam PF01751 Toprim domain 5 134 2.5E-14 T 11-10-2018 IPR006171 TOPRIM domain UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 SMART SM00436 126 216 9.9E-41 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 Gene3D G3DSA:1.10.290.10 272 402 3.0E-151 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 SMART SM00437 263 550 2.4E-96 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 Gene3D G3DSA:1.10.460.10 160 594 3.0E-151 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 Pfam PF01131 DNA topoisomerase 152 584 4.2E-124 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 Gene3D G3DSA:3.40.50.140 3 154 8.2E-52 T 11-10-2018 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 639 67.28 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 SUPERFAMILY SSF56712 3 600 2.88E-178 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 728 1.1E-271 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 300 315 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 SMART SM00493 3 126 2.2E-14 T 11-10-2018 IPR006171 TOPRIM domain UP17_24620 fba4facce18605ff630adbb1dbd4d000 730 Gene3D G3DSA:2.70.20.10 210 478 3.0E-151 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 UP17_24415 349e07e0941a1d81addd2ecbfd114e65 282 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 184 5.2E-15 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 UP17_24415 349e07e0941a1d81addd2ecbfd114e65 282 Gene3D G3DSA:3.30.930.10 4 281 5.4E-79 T 11-10-2018 UP17_24415 349e07e0941a1d81addd2ecbfd114e65 282 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 278 49.534 T 11-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 UP17_24415 349e07e0941a1d81addd2ecbfd114e65 282 SUPERFAMILY SSF55681 6 262 1.33E-68 T 11-10-2018 UP17_23150 d21e7eb250bf573b13cc5d80288e4883 278 PIRSF PIRSF002854 1 278 2.4E-105 T 11-10-2018 IPR004872 Lipoprotein NlpA family UP17_23150 d21e7eb250bf573b13cc5d80288e4883 278 Pfam PF03180 NLPA lipoprotein 38 276 1.3E-89 T 11-10-2018 IPR004872 Lipoprotein NlpA family UP17_23150 d21e7eb250bf573b13cc5d80288e4883 278 SUPERFAMILY SSF53850 37 276 1.99E-80 T 11-10-2018 UP17_23150 d21e7eb250bf573b13cc5d80288e4883 278 Gene3D G3DSA:3.40.190.10 40 274 1.0E-96 T 11-10-2018 UP17_23150 d21e7eb250bf573b13cc5d80288e4883 278 Gene3D G3DSA:3.40.190.10 119 227 1.0E-96 T 11-10-2018 UP17_17445 6890343ceef89c856e369e92793c1b25 204 SUPERFAMILY SSF47781 65 136 1.41E-20 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_17445 6890343ceef89c856e369e92793c1b25 204 SUPERFAMILY SSF50249 1 62 2.51E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_17445 6890343ceef89c856e369e92793c1b25 204 Pfam PF14520 Helix-hairpin-helix domain 71 128 2.8E-14 T 11-10-2018 UP17_17445 6890343ceef89c856e369e92793c1b25 204 Pfam PF07499 RuvA, C-terminal domain 159 202 2.7E-14 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 UP17_17445 6890343ceef89c856e369e92793c1b25 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 29.745 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 UP17_17445 6890343ceef89c856e369e92793c1b25 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 4 203 4.8E-61 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 UP17_17445 6890343ceef89c856e369e92793c1b25 204 Gene3D G3DSA:1.10.8.10 156 202 6.0E-10 T 11-10-2018 UP17_17445 6890343ceef89c856e369e92793c1b25 204 Pfam PF01330 RuvA N terminal domain 2 61 4.7E-17 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 UP17_17445 6890343ceef89c856e369e92793c1b25 204 SUPERFAMILY SSF46929 158 202 1.01E-11 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily UP17_17445 6890343ceef89c856e369e92793c1b25 204 Gene3D G3DSA:2.40.50.140 1 64 8.7E-16 T 11-10-2018 UP17_17445 6890343ceef89c856e369e92793c1b25 204 Gene3D G3DSA:1.10.150.20 66 140 1.0E-24 T 11-10-2018 UP17_17445 6890343ceef89c856e369e92793c1b25 204 SMART SM00278 72 91 0.8 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_17445 6890343ceef89c856e369e92793c1b25 204 SMART SM00278 107 126 3.7 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 UP17_12070 881439ea5ad8070494623ba187599ebf 357 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 29 354 4.8E-107 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 UP17_12070 881439ea5ad8070494623ba187599ebf 357 Gene3D G3DSA:2.40.50.940 217 354 4.3E-10 T 11-10-2018 UP17_12070 881439ea5ad8070494623ba187599ebf 357 Gene3D G3DSA:2.40.50.140 285 347 4.3E-10 T 11-10-2018 UP17_12070 881439ea5ad8070494623ba187599ebf 357 SUPERFAMILY SSF52540 2 236 2.73E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12070 881439ea5ad8070494623ba187599ebf 357 SUPERFAMILY SSF50331 232 354 1.08E-13 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal UP17_12070 881439ea5ad8070494623ba187599ebf 357 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_12070 881439ea5ad8070494623ba187599ebf 357 SMART SM00382 23 206 7.8E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12070 881439ea5ad8070494623ba187599ebf 357 Pfam PF00005 ABC transporter 14 156 3.0E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_12070 881439ea5ad8070494623ba187599ebf 357 Gene3D G3DSA:3.40.50.300 2 216 3.2E-67 T 11-10-2018 UP17_12070 881439ea5ad8070494623ba187599ebf 357 Pfam PF08402 TOBE domain 280 354 4.9E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Gene3D G3DSA:3.60.20.10 22 552 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 SUPERFAMILY SSF51395 460 1204 1.06E-259 T 11-10-2018 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Pfam PF00310 Glutamine amidotransferases class-II 22 438 1.1E-183 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Gene3D G3DSA:2.160.20.60 1216 1490 3.2E-107 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Pfam PF01645 Conserved region in glutamate synthase 799 1167 1.4E-160 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Gene3D G3DSA:3.20.20.70 490 1183 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Pfam PF01493 GXGXG motif 1245 1432 3.2E-79 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Gene3D G3DSA:3.20.20.70 443 798 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 SUPERFAMILY SSF69336 1214 1479 1.7E-90 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 Pfam PF04898 Glutamate synthase central domain 464 740 2.2E-113 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UP17_21965 a6d323ebf2ac0232ed50c69543ae992d 1516 SUPERFAMILY SSF56235 22 441 1.4E-151 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_02365 717b40a5c201568779a21515f5b69a2e 334 SUPERFAMILY SSF81345 28 244 6.15E-7 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_02365 717b40a5c201568779a21515f5b69a2e 334 Gene3D G3DSA:1.10.3470.10 77 251 1.9E-5 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_02365 717b40a5c201568779a21515f5b69a2e 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 325 4.6E-43 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 UP17_06860 a8e3ab39610a0e440bcda63bd944c7d9 287 SUPERFAMILY SSF56300 57 285 3.19E-35 T 11-10-2018 UP17_06860 a8e3ab39610a0e440bcda63bd944c7d9 287 Pfam PF00149 Calcineurin-like phosphoesterase 59 224 5.3E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_06860 a8e3ab39610a0e440bcda63bd944c7d9 287 Gene3D G3DSA:3.60.21.10 57 258 5.3E-25 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_13245 1f71f5a5af1759a1e7ed6c38b71cb1a1 333 Pfam PF01545 Cation efflux family 16 224 3.9E-24 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_13245 1f71f5a5af1759a1e7ed6c38b71cb1a1 333 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 308 2.2E-34 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_13245 1f71f5a5af1759a1e7ed6c38b71cb1a1 333 Gene3D G3DSA:3.30.70.1350 228 307 1.9E-9 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 UP17_13245 1f71f5a5af1759a1e7ed6c38b71cb1a1 333 SUPERFAMILY SSF160240 233 307 1.7E-13 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 UP17_13245 1f71f5a5af1759a1e7ed6c38b71cb1a1 333 Pfam PF16916 Dimerisation domain of Zinc Transporter 235 305 2.7E-11 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain UP17_13245 1f71f5a5af1759a1e7ed6c38b71cb1a1 333 Gene3D G3DSA:1.20.1510.10 12 226 9.7E-22 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_13245 1f71f5a5af1759a1e7ed6c38b71cb1a1 333 SUPERFAMILY SSF161111 10 229 1.57E-27 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_24550 137de2221ce9a308a80ba5e3a79809cb 142 Gene3D G3DSA:3.40.50.300 31 142 4.6E-10 T 11-10-2018 UP17_24550 137de2221ce9a308a80ba5e3a79809cb 142 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 45 140 3.8E-9 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 UP17_24550 137de2221ce9a308a80ba5e3a79809cb 142 SUPERFAMILY SSF52540 1 142 5.84E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20645 ce1e4d45b48a9dbafa3346cefa3f725c 341 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 6.5E-28 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_20645 ce1e4d45b48a9dbafa3346cefa3f725c 341 SMART SM00382 37 245 7.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_20645 ce1e4d45b48a9dbafa3346cefa3f725c 341 Pfam PF00005 ABC transporter 29 187 2.4E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_20645 ce1e4d45b48a9dbafa3346cefa3f725c 341 Gene3D G3DSA:3.40.50.300 6 338 7.3E-104 T 11-10-2018 UP17_20645 ce1e4d45b48a9dbafa3346cefa3f725c 341 SUPERFAMILY SSF52540 36 321 5.55E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20645 ce1e4d45b48a9dbafa3346cefa3f725c 341 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 1.3E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_20645 ce1e4d45b48a9dbafa3346cefa3f725c 341 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_09425 43ac635e1c9d7307bc9c1f5b9cb2b039 477 Pfam PF00171 Aldehyde dehydrogenase family 14 469 2.0E-164 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_09425 43ac635e1c9d7307bc9c1f5b9cb2b039 477 Gene3D G3DSA:3.40.309.10 252 441 1.3E-161 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_09425 43ac635e1c9d7307bc9c1f5b9cb2b039 477 Gene3D G3DSA:3.40.605.10 29 459 1.3E-161 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_09425 43ac635e1c9d7307bc9c1f5b9cb2b039 477 SUPERFAMILY SSF53720 3 474 2.62E-152 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_10000 d243f2cc2a5faa2f659b11f168a1ddf3 275 SUPERFAMILY SSF56024 110 177 1.1E-6 T 11-10-2018 UP17_10000 d243f2cc2a5faa2f659b11f168a1ddf3 275 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 9 75 5.2E-19 T 11-10-2018 IPR002831 Transcription regulator TrmB, N-terminal UP17_10000 d243f2cc2a5faa2f659b11f168a1ddf3 275 Pfam PF11495 Archaeal transcriptional regulator TrmB 110 167 4.1E-9 T 11-10-2018 IPR021586 Transcription regulator TrmB, C-terminal UP17_10000 d243f2cc2a5faa2f659b11f168a1ddf3 275 Gene3D G3DSA:3.30.870.10 76 188 2.6E-6 T 11-10-2018 UP17_10000 d243f2cc2a5faa2f659b11f168a1ddf3 275 Gene3D G3DSA:1.10.10.10 1 73 5.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_00825 130e8fc4cf671c4ba0ee560e694413fe 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00825 130e8fc4cf671c4ba0ee560e694413fe 120 Pfam PF01196 Ribosomal protein L17 16 120 1.0E-38 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00825 130e8fc4cf671c4ba0ee560e694413fe 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 28.717 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00825 130e8fc4cf671c4ba0ee560e694413fe 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 120 2.1E-48 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00825 130e8fc4cf671c4ba0ee560e694413fe 120 Gene3D G3DSA:3.90.1030.10 1 120 1.5E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00825 130e8fc4cf671c4ba0ee560e694413fe 120 SUPERFAMILY SSF64263 2 120 3.14E-44 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_05085 894091f7c045404258f62923d2fd3ced 403 SUPERFAMILY SSF103473 1 396 8.63E-70 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_05085 894091f7c045404258f62923d2fd3ced 403 Pfam PF07690 Major Facilitator Superfamily 15 276 2.4E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_05085 894091f7c045404258f62923d2fd3ced 403 Gene3D G3DSA:1.20.1250.20 217 403 8.2E-27 T 11-10-2018 UP17_05085 894091f7c045404258f62923d2fd3ced 403 PRINTS PR01035 Tetracycline resistance protein signature 82 106 1.4E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_05085 894091f7c045404258f62923d2fd3ced 403 PRINTS PR01035 Tetracycline resistance protein signature 139 161 1.4E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_05085 894091f7c045404258f62923d2fd3ced 403 PRINTS PR01035 Tetracycline resistance protein signature 109 130 1.4E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_05085 894091f7c045404258f62923d2fd3ced 403 PRINTS PR01035 Tetracycline resistance protein signature 343 366 1.4E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_05085 894091f7c045404258f62923d2fd3ced 403 PRINTS PR01035 Tetracycline resistance protein signature 51 70 1.4E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_05085 894091f7c045404258f62923d2fd3ced 403 Gene3D G3DSA:1.20.1250.20 5 198 4.9E-36 T 11-10-2018 UP17_11885 ed1062430264a107e97ce95f6b8a3dd4 494 SUPERFAMILY SSF53383 11 481 2.67E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_11885 ed1062430264a107e97ce95f6b8a3dd4 494 Pfam PF02347 Glycine cleavage system P-protein 32 298 2.6E-13 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 UP17_11885 ed1062430264a107e97ce95f6b8a3dd4 494 Gene3D G3DSA:3.90.1150.10 337 468 4.4E-45 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_11885 ed1062430264a107e97ce95f6b8a3dd4 494 Gene3D G3DSA:3.40.640.10 85 314 3.7E-62 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_11885 ed1062430264a107e97ce95f6b8a3dd4 494 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 6 483 59.128 T 11-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 3.4E-33 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 SUPERFAMILY SSF54211 80 159 8.09E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 Gene3D G3DSA:3.30.160.20 1 73 9.4E-36 T 11-10-2018 UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 3.3E-30 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 SUPERFAMILY SSF54768 8 76 1.15E-25 T 11-10-2018 UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 1.4E-71 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 Gene3D G3DSA:3.30.230.10 74 166 5.5E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_00775 7524557a3cd3d8f730e8ac18232a2e39 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 36.68 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 UP17_20140 25496a2b7a542fea78c657a7d71033cc 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 1.8E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20140 25496a2b7a542fea78c657a7d71033cc 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 1.8E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20140 25496a2b7a542fea78c657a7d71033cc 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 412 1.8E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_20140 25496a2b7a542fea78c657a7d71033cc 423 SUPERFAMILY SSF55874 270 412 3.41E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20140 25496a2b7a542fea78c657a7d71033cc 423 Gene3D G3DSA:3.30.565.10 265 416 1.5E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20140 25496a2b7a542fea78c657a7d71033cc 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 312 412 1.2E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_20140 25496a2b7a542fea78c657a7d71033cc 423 SMART SM00387 305 415 2.0E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_15940 ea69f6ece616e5fa940ba9d828981943 140 SUPERFAMILY SSF54593 1 134 4.63E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_15940 ea69f6ece616e5fa940ba9d828981943 140 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 116 2.1E-21 T 11-10-2018 UP17_15940 ea69f6ece616e5fa940ba9d828981943 140 Gene3D G3DSA:3.10.180.10 1 132 5.8E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_15940 ea69f6ece616e5fa940ba9d828981943 140 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 131 9.2E-45 T 11-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 UP17_08550 8a4abb3d2726b1557445e2c59e72688b 193 Gene3D G3DSA:2.60.120.10 65 189 1.1E-42 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_08550 8a4abb3d2726b1557445e2c59e72688b 193 Pfam PF07883 Cupin domain 90 165 3.7E-13 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_08550 8a4abb3d2726b1557445e2c59e72688b 193 SUPERFAMILY SSF51182 49 171 5.18E-27 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_20540 97d6c49050d7dda73c645d5d214550b3 511 SUPERFAMILY SSF55604 437 510 1.19E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_20540 97d6c49050d7dda73c645d5d214550b3 511 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 449 466 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_20540 97d6c49050d7dda73c645d5d214550b3 511 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 414 495 1.7E-18 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 UP17_20540 97d6c49050d7dda73c645d5d214550b3 511 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 63 361 1.2E-89 T 11-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 UP17_20540 97d6c49050d7dda73c645d5d214550b3 511 Gene3D G3DSA:3.30.1360.60 431 511 3.2E-28 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_20540 97d6c49050d7dda73c645d5d214550b3 511 Pfam PF00367 phosphotransferase system, EIIB 439 470 1.1E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_20540 97d6c49050d7dda73c645d5d214550b3 511 Pfam PF02378 Phosphotransferase system, EIIC 12 350 5.2E-92 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_05670 81fe57e2f5c1dce5a1bdf6c3ef9e7367 269 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 210 264 3.1E-23 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 UP17_05670 81fe57e2f5c1dce5a1bdf6c3ef9e7367 269 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 4 204 5.9E-61 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_05670 81fe57e2f5c1dce5a1bdf6c3ef9e7367 269 PIRSF PIRSF006483 1 269 8.3E-91 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_05670 81fe57e2f5c1dce5a1bdf6c3ef9e7367 269 Gene3D G3DSA:3.30.70.120 182 257 6.0E-22 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 SUPERFAMILY SSF47781 503 589 2.07E-21 T 11-10-2018 IPR010994 RuvA domain 2-like UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 Gene3D G3DSA:3.30.420.340 365 523 1.3E-59 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 SUPERFAMILY SSF82771 14 97 2.48E-21 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 Gene3D G3DSA:3.40.1440.10 1 99 9.0E-38 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 Pfam PF02151 UvrB/uvrC motif 198 228 4.8E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 4.7E-208 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 SUPERFAMILY SSF46600 182 235 2.09E-13 T 11-10-2018 IPR036876 UVR domain superfamily UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 Gene3D G3DSA:1.10.150.20 527 588 7.7E-22 T 11-10-2018 UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 9.1E-10 T 11-10-2018 IPR000305 GIY-YIG endonuclease UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 28.295 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 376 523 3.9E-53 T 11-10-2018 IPR001162 UvrC family homology region UP17_17880 f3445f7bcc2063cb45f6d11e248e169c 590 SMART SM00465 15 95 7.2E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.91 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 Pfam PF00453 Ribosomal protein L20 3 109 7.2E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 8.0E-13 T 11-10-2018 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 Gene3D G3DSA:1.10.720.90 2 55 9.2E-26 T 11-10-2018 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 Gene3D G3DSA:1.10.1900.20 56 118 1.2E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.4E-50 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 SUPERFAMILY SSF74731 2 117 3.01E-49 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 5.5E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 5.5E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_18050 7c71ab4bd90f13e0033302d689efdc38 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 5.5E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_20515 e9bc1f6182b72b139a6d6891a0af07b1 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.6E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_20515 e9bc1f6182b72b139a6d6891a0af07b1 296 Pfam PF03466 LysR substrate binding domain 86 281 6.9E-39 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_20515 e9bc1f6182b72b139a6d6891a0af07b1 296 Gene3D G3DSA:1.10.10.10 1 88 9.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20515 e9bc1f6182b72b139a6d6891a0af07b1 296 Gene3D G3DSA:3.40.190.290 90 287 1.9E-35 T 11-10-2018 UP17_20515 e9bc1f6182b72b139a6d6891a0af07b1 296 SUPERFAMILY SSF53850 88 282 5.16E-34 T 11-10-2018 UP17_20515 e9bc1f6182b72b139a6d6891a0af07b1 296 SUPERFAMILY SSF46785 1 99 2.01E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 Gene3D G3DSA:3.90.1150.10 11 441 7.6E-140 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 12 448 1.8E-176 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 Pfam PF00202 Aminotransferase class-III 30 443 3.0E-96 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 SUPERFAMILY SSF53383 19 443 4.66E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 Gene3D G3DSA:3.40.640.10 66 334 7.6E-140 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 PIRSF PIRSF000521 7 135 9.4E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 PIRSF PIRSF000521 109 446 1.4E-36 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_24835 658fa847f75189f03ff2dbc6120aab39 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_00615 91164e728dcc76ca913a67542688ea9b 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 13.245 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00615 91164e728dcc76ca913a67542688ea9b 60 Gene3D G3DSA:1.20.5.1030 1 58 1.8E-18 T 11-10-2018 IPR038379 SecE superfamily UP17_00615 91164e728dcc76ca913a67542688ea9b 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 57 6.8E-21 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00615 91164e728dcc76ca913a67542688ea9b 60 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00615 91164e728dcc76ca913a67542688ea9b 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 4 59 1.1E-21 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 240 3.4E-60 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 PIRSF PIRSF001430 1 245 2.3E-80 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 Gene3D G3DSA:3.30.70.660 107 244 3.6E-49 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 Gene3D G3DSA:3.30.70.580 1 106 2.4E-33 T 11-10-2018 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 35.368 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 7.2E-30 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 Pfam PF01416 tRNA pseudouridine synthase 9 105 1.5E-7 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_06190 47083e13d55a3c9212c9c801cf9ab517 245 SUPERFAMILY SSF55120 1 245 6.33E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_13450 e66010c536475165999c7ae73278c8b2 315 Gene3D G3DSA:3.10.180.10 67 210 1.6E-118 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_13450 e66010c536475165999c7ae73278c8b2 315 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 266 3.0E-33 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_13450 e66010c536475165999c7ae73278c8b2 315 Gene3D G3DSA:3.10.180.10 7 303 1.6E-118 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_13450 e66010c536475165999c7ae73278c8b2 315 SUPERFAMILY SSF54593 5 293 5.72E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 TIGRFAM TIGR00836 amt: ammonium transporter 5 400 3.5E-146 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 Pfam PF00909 Ammonium Transporter Family 7 400 1.1E-134 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 SUPERFAMILY SSF111352 3 381 9.42E-129 T 11-10-2018 UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 Gene3D G3DSA:1.10.3430.10 1 404 6.7E-147 T 11-10-2018 IPR029020 Ammonium/urea transporter UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 PRINTS PR00342 Rhesus blood group protein signature 225 247 1.1E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 PRINTS PR00342 Rhesus blood group protein signature 194 212 1.1E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 PRINTS PR00342 Rhesus blood group protein signature 101 117 1.1E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 UP17_02485 03784aecf03a65fc41d18abe4368aa31 404 PRINTS PR00342 Rhesus blood group protein signature 280 298 1.1E-5 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 Hamap MF_01680 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [mtnX]. 1 215 47.232 T 11-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 Gene3D G3DSA:3.40.50.1000 5 208 4.1E-68 T 11-10-2018 IPR023214 HAD superfamily UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 185 1.2E-49 T 11-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 176 5.5E-20 T 11-10-2018 UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 SUPERFAMILY SSF56784 1 213 6.62E-51 T 11-10-2018 IPR036412 HAD-like superfamily UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 Gene3D G3DSA:3.90.1470.20 14 133 4.1E-68 T 11-10-2018 UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 177 2.2E-32 T 11-10-2018 UP17_14155 e7bd4d89b9f92516b4ccb60addb89eee 219 TIGRFAM TIGR03333 salvage_mtnX: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase 4 217 3.0E-98 T 11-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 SUPERFAMILY SSF47413 4 62 5.23E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 Gene3D G3DSA:1.10.260.40 4 61 4.7E-19 T 11-10-2018 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 SMART SM00354 4 73 2.5E-28 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 SUPERFAMILY SSF53822 60 312 2.04E-60 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_08515 a6437b14cf1823629331503ef876fb2d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 4.1E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 Gene3D G3DSA:3.40.50.2300 164 285 1.6E-64 T 11-10-2018 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 4.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 4.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 Pfam PF13377 Periplasmic binding protein-like domain 170 326 2.9E-25 T 11-10-2018 UP17_08515 a6437b14cf1823629331503ef876fb2d 334 Gene3D G3DSA:3.40.50.2300 67 308 1.6E-64 T 11-10-2018 UP17_15505 c119fa57e1f847abe9d6acbce228365a 224 Pfam PF02224 Cytidylate kinase 7 220 1.5E-75 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 UP17_15505 c119fa57e1f847abe9d6acbce228365a 224 Gene3D G3DSA:3.40.50.300 1 223 6.4E-83 T 11-10-2018 UP17_15505 c119fa57e1f847abe9d6acbce228365a 224 SUPERFAMILY SSF52540 6 220 1.28E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15505 c119fa57e1f847abe9d6acbce228365a 224 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 32.539 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 UP17_15505 c119fa57e1f847abe9d6acbce228365a 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 217 1.3E-82 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 UP17_24970 30204fd7a37496f0a6febb88ad6d56f1 94 Pfam PF01250 Ribosomal protein S6 3 91 2.2E-28 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24970 30204fd7a37496f0a6febb88ad6d56f1 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 2.5E-30 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24970 30204fd7a37496f0a6febb88ad6d56f1 94 SUPERFAMILY SSF54995 1 92 4.06E-31 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_24970 30204fd7a37496f0a6febb88ad6d56f1 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.347 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 UP17_24970 30204fd7a37496f0a6febb88ad6d56f1 94 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 UP17_24970 30204fd7a37496f0a6febb88ad6d56f1 94 Gene3D G3DSA:3.30.70.60 1 94 3.7E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 UP17_19455 803532294be484766ba565ed17ecaea9 216 Pfam PF01323 DSBA-like thioredoxin domain 5 193 2.7E-28 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 UP17_19455 803532294be484766ba565ed17ecaea9 216 Gene3D G3DSA:3.40.30.10 1 196 1.5E-42 T 11-10-2018 UP17_19455 803532294be484766ba565ed17ecaea9 216 SUPERFAMILY SSF52833 1 199 1.68E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_01865 4fc901f1b8977c04803e6d7ed3344e6b 734 SMART SM00460 481 554 1.5E-21 T 11-10-2018 IPR002931 Transglutaminase-like UP17_01865 4fc901f1b8977c04803e6d7ed3344e6b 734 Pfam PF01841 Transglutaminase-like superfamily 433 552 2.5E-26 T 11-10-2018 IPR002931 Transglutaminase-like UP17_01865 4fc901f1b8977c04803e6d7ed3344e6b 734 Gene3D G3DSA:3.10.620.30 388 562 4.6E-22 T 11-10-2018 UP17_01865 4fc901f1b8977c04803e6d7ed3344e6b 734 SUPERFAMILY SSF54001 415 576 6.59E-37 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_01865 4fc901f1b8977c04803e6d7ed3344e6b 734 Pfam PF13559 Domain of unknown function (DUF4129) 661 725 3.1E-6 T 11-10-2018 IPR025403 Domain of unknown function DUF4129 UP17_09220 73278084070766cfe2a12b43b4848fcb 556 Gene3D G3DSA:3.90.400.10 103 171 1.6E-190 T 11-10-2018 UP17_09220 73278084070766cfe2a12b43b4848fcb 556 Gene3D G3DSA:3.20.20.80 4 465 1.6E-190 T 11-10-2018 UP17_09220 73278084070766cfe2a12b43b4848fcb 556 Pfam PF00128 Alpha amylase, catalytic domain 26 370 3.6E-122 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_09220 73278084070766cfe2a12b43b4848fcb 556 SUPERFAMILY SSF51011 473 552 9.0E-17 T 11-10-2018 UP17_09220 73278084070766cfe2a12b43b4848fcb 556 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 4 550 3.0E-272 T 11-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 UP17_09220 73278084070766cfe2a12b43b4848fcb 556 Pfam PF16657 Maltogenic Amylase, C-terminal domain 473 519 3.1E-7 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal UP17_09220 73278084070766cfe2a12b43b4848fcb 556 Gene3D G3DSA:2.60.40.1180 474 555 1.9E-21 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta UP17_09220 73278084070766cfe2a12b43b4848fcb 556 SMART SM00642 11 412 1.3E-154 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_09220 73278084070766cfe2a12b43b4848fcb 556 SUPERFAMILY SSF51445 4 470 1.66E-146 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 SUPERFAMILY SSF55874 271 420 4.58E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 SUPERFAMILY SSF47384 206 269 2.94E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 271 3.2E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 SMART SM00091 83 149 1.4E-5 T 11-10-2018 IPR000014 PAS domain UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 Pfam PF08448 PAS fold 89 197 4.4E-11 T 11-10-2018 IPR013656 PAS fold-4 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 421 5.7E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 SMART SM00387 316 422 1.6E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 2.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 SMART SM00388 210 273 3.0E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 SUPERFAMILY SSF55785 70 193 1.92E-20 T 11-10-2018 IPR035965 PAS domain superfamily UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 Gene3D G3DSA:3.30.565.10 274 424 2.7E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 Gene3D G3DSA:1.10.287.130 196 272 9.3E-13 T 11-10-2018 UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 82 200 4.3E-20 T 11-10-2018 IPR000014 PAS domain UP17_02610 c2729a360b36269e1c0be8aa3234bab6 425 Gene3D G3DSA:3.30.450.20 70 193 3.8E-20 T 11-10-2018 UP17_11585 c4ff7c61dcbcdfce99095914522ca5a4 361 Gene3D G3DSA:3.60.15.10 85 355 3.6E-84 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_11585 c4ff7c61dcbcdfce99095914522ca5a4 361 PIRSF PIRSF038896 15 350 4.3E-96 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 UP17_11585 c4ff7c61dcbcdfce99095914522ca5a4 361 Pfam PF12706 Beta-lactamase superfamily domain 114 310 1.4E-47 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_11585 c4ff7c61dcbcdfce99095914522ca5a4 361 SUPERFAMILY SSF56281 97 345 8.12E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_06050 ef59798621f008c928bd0c3160ba6a59 206 Pfam PF04607 Region found in RelA / SpoT proteins 43 161 6.1E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 UP17_06050 ef59798621f008c928bd0c3160ba6a59 206 SUPERFAMILY SSF81301 4 197 3.11E-57 T 11-10-2018 UP17_06050 ef59798621f008c928bd0c3160ba6a59 206 SMART SM00954 43 164 7.8E-38 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 UP17_06050 ef59798621f008c928bd0c3160ba6a59 206 Gene3D G3DSA:3.30.460.10 1 146 5.7E-50 T 11-10-2018 UP17_06050 ef59798621f008c928bd0c3160ba6a59 206 Gene3D G3DSA:1.10.287.860 147 206 3.7E-27 T 11-10-2018 UP17_11350 c3b2795951f84cbc8abf5a5fd442feef 153 Gene3D G3DSA:3.40.630.30 5 153 2.8E-26 T 11-10-2018 UP17_11350 c3b2795951f84cbc8abf5a5fd442feef 153 SUPERFAMILY SSF55729 19 148 5.07E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_11350 c3b2795951f84cbc8abf5a5fd442feef 153 Pfam PF00583 Acetyltransferase (GNAT) family 23 142 7.1E-12 T 11-10-2018 IPR000182 GNAT domain UP17_19765 43edad42c0915689567b528792ca845e 148 SMART SM00347 31 131 2.6E-25 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_19765 43edad42c0915689567b528792ca845e 148 Pfam PF01047 MarR family 38 95 1.2E-18 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_19765 43edad42c0915689567b528792ca845e 148 SUPERFAMILY SSF46785 8 141 4.26E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_19765 43edad42c0915689567b528792ca845e 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site UP17_19765 43edad42c0915689567b528792ca845e 148 Gene3D G3DSA:1.10.10.10 1 142 1.2E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19765 43edad42c0915689567b528792ca845e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.4E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_19765 43edad42c0915689567b528792ca845e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.4E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_19765 43edad42c0915689567b528792ca845e 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.4E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_02415 94c457d02ef3cdcf875e2c18d17651d8 94 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 10 82 5.4E-10 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 UP17_02415 94c457d02ef3cdcf875e2c18d17651d8 94 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 1 93 2.6E-34 T 11-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 UP17_10955 e1a7bf9ebe3811f0a447657712db131c 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 48 1.2E-18 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_10955 e1a7bf9ebe3811f0a447657712db131c 75 Pfam PF02416 mttA/Hcf106 family 5 55 4.6E-21 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 UP17_10955 e1a7bf9ebe3811f0a447657712db131c 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 61 17.53 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_10955 e1a7bf9ebe3811f0a447657712db131c 75 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.8E-5 T 11-10-2018 UP17_10955 e1a7bf9ebe3811f0a447657712db131c 75 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.8E-5 T 11-10-2018 UP17_09000 cda4adac52f1250f9b3b221dd1e18d44 265 Gene3D G3DSA:3.90.850.10 35 265 1.1E-70 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_09000 cda4adac52f1250f9b3b221dd1e18d44 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 69 264 2.7E-54 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 UP17_09000 cda4adac52f1250f9b3b221dd1e18d44 265 Pfam PF10370 Domain of unknown function (DUF2437) 9 62 1.4E-4 T 11-10-2018 IPR018833 Domain of unknown function DUF2437 UP17_09000 cda4adac52f1250f9b3b221dd1e18d44 265 SUPERFAMILY SSF56529 61 265 8.9E-67 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_06570 d98d0a34e39411d5e7a3cce0080d0372 436 ProSitePatterns PS00217 Sugar transport proteins signature 2. 346 371 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_06570 d98d0a34e39411d5e7a3cce0080d0372 436 Gene3D G3DSA:1.20.1250.20 22 430 1.3E-37 T 11-10-2018 UP17_06570 d98d0a34e39411d5e7a3cce0080d0372 436 Pfam PF11700 Vacuole effluxer Atg22 like 23 428 2.4E-34 T 11-10-2018 IPR024671 Autophagy-related protein 22-like UP17_06570 d98d0a34e39411d5e7a3cce0080d0372 436 SUPERFAMILY SSF103473 24 429 1.44E-45 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_16860 0cfcea21290b9a209a807088e231cb68 189 Gene3D G3DSA:3.40.50.620 1 188 4.5E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_16860 0cfcea21290b9a209a807088e231cb68 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 2.6E-56 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 UP17_16860 0cfcea21290b9a209a807088e231cb68 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 31.33 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 UP17_16860 0cfcea21290b9a209a807088e231cb68 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 1.6E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_16860 0cfcea21290b9a209a807088e231cb68 189 SUPERFAMILY SSF52374 1 188 5.63E-53 T 11-10-2018 UP17_16860 0cfcea21290b9a209a807088e231cb68 189 Pfam PF01467 Cytidylyltransferase-like 6 161 1.2E-33 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_01755 c287f0d1e9b53a38449d1df451470eb2 505 Gene3D G3DSA:1.10.275.10 1 195 7.9E-70 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal UP17_01755 c287f0d1e9b53a38449d1df451470eb2 505 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 496 6.8E-220 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_01755 c287f0d1e9b53a38449d1df451470eb2 505 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 UP17_01755 c287f0d1e9b53a38449d1df451470eb2 505 Pfam PF00221 Aromatic amino acid lyase 9 467 1.1E-197 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 UP17_01755 c287f0d1e9b53a38449d1df451470eb2 505 SUPERFAMILY SSF48557 1 495 2.28E-195 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 UP17_01755 c287f0d1e9b53a38449d1df451470eb2 505 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 500 45.36 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 UP17_01755 c287f0d1e9b53a38449d1df451470eb2 505 Gene3D G3DSA:1.20.200.10 196 499 9.3E-124 T 11-10-2018 UP17_03590 2eb25a8c0b953bea14a3ed304f8deea2 245 SUPERFAMILY SSF52540 1 240 2.21E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03590 2eb25a8c0b953bea14a3ed304f8deea2 245 PIRSF PIRSF039085 1 245 3.2E-116 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 UP17_03590 2eb25a8c0b953bea14a3ed304f8deea2 245 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_03590 2eb25a8c0b953bea14a3ed304f8deea2 245 Pfam PF00005 ABC transporter 17 169 1.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03590 2eb25a8c0b953bea14a3ed304f8deea2 245 SMART SM00382 26 218 1.4E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_03590 2eb25a8c0b953bea14a3ed304f8deea2 245 Gene3D G3DSA:3.40.50.300 1 244 2.5E-75 T 11-10-2018 UP17_05370 95acdcef75474615085228700886814c 264 SMART SM00849 22 193 1.0E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_05370 95acdcef75474615085228700886814c 264 Gene3D G3DSA:3.60.15.10 1 219 6.3E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_05370 95acdcef75474615085228700886814c 264 SUPERFAMILY SSF56281 7 242 3.93E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_05370 95acdcef75474615085228700886814c 264 Pfam PF00753 Metallo-beta-lactamase superfamily 32 167 4.0E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_05515 ad77b470f740e6dc59bca39d9c47b4d0 274 Pfam PF00005 ABC transporter 21 168 5.9E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_05515 ad77b470f740e6dc59bca39d9c47b4d0 274 Gene3D G3DSA:3.40.50.300 1 249 7.2E-67 T 11-10-2018 UP17_05515 ad77b470f740e6dc59bca39d9c47b4d0 274 SUPERFAMILY SSF52540 3 230 5.11E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05515 ad77b470f740e6dc59bca39d9c47b4d0 274 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_05515 ad77b470f740e6dc59bca39d9c47b4d0 274 SMART SM00382 29 218 3.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 SUPERFAMILY SSF52540 5 235 1.98E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 Pfam PF00005 ABC transporter 20 174 2.8E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 Gene3D G3DSA:3.40.50.300 259 495 3.6E-45 T 11-10-2018 UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 SMART SM00382 29 222 7.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 SMART SM00382 282 486 5.8E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 Pfam PF00005 ABC transporter 273 428 5.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 SUPERFAMILY SSF52540 254 482 1.55E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 Gene3D G3DSA:3.40.50.300 2 257 1.6E-52 T 11-10-2018 UP17_02360 917b883046ae9a0dca3ff01c8a9aa7b9 500 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23765 04a2ddbd23c624734539633b993ef74b 519 PRINTS PR01005 Flagellar hook-associated protein signature 433 454 3.0E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UP17_23765 04a2ddbd23c624734539633b993ef74b 519 PRINTS PR01005 Flagellar hook-associated protein signature 480 504 3.0E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UP17_23765 04a2ddbd23c624734539633b993ef74b 519 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 3.0E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UP17_23765 04a2ddbd23c624734539633b993ef74b 519 Pfam PF00460 Flagella basal body rod protein 8 37 5.1E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UP17_23765 04a2ddbd23c624734539633b993ef74b 519 SUPERFAMILY SSF64518 148 512 2.62E-18 T 11-10-2018 UP17_23765 04a2ddbd23c624734539633b993ef74b 519 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 460 512 7.2E-15 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UP17_23765 04a2ddbd23c624734539633b993ef74b 519 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 512 2.2E-97 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 UP17_23765 04a2ddbd23c624734539633b993ef74b 519 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PIRSF PIRSF019574 1 356 3.0E-130 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 Gene3D G3DSA:3.40.190.10 139 330 6.8E-122 T 11-10-2018 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 Pfam PF13416 Bacterial extracellular solute-binding protein 50 320 8.0E-42 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 SUPERFAMILY SSF53850 35 353 6.85E-97 T 11-10-2018 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 Gene3D G3DSA:3.40.190.10 39 322 6.8E-122 T 11-10-2018 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_01135 6488c60825c5a8fa4c60158681d93d2a 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 1.0E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 UP17_04255 ae8270f439917f1ce23e708f09f5e9ec 156 Pfam PF03640 Secreted repeat of unknown function 106 148 5.0E-15 T 11-10-2018 IPR005297 Lipoprotein repeat UP17_04255 ae8270f439917f1ce23e708f09f5e9ec 156 Pfam PF03640 Secreted repeat of unknown function 51 89 1.9E-12 T 11-10-2018 IPR005297 Lipoprotein repeat UP17_24905 cd3edcf870b1a2da1e58583426c51a2c 472 Pfam PF01551 Peptidase family M23 372 466 1.1E-31 T 11-10-2018 IPR016047 Peptidase M23 UP17_24905 cd3edcf870b1a2da1e58583426c51a2c 472 Gene3D G3DSA:2.20.230.10 266 347 2.8E-12 T 11-10-2018 UP17_24905 cd3edcf870b1a2da1e58583426c51a2c 472 Gene3D G3DSA:2.70.70.10 360 472 1.1E-39 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_24905 cd3edcf870b1a2da1e58583426c51a2c 472 SMART SM01208 265 343 2.1E-12 T 11-10-2018 IPR011098 G5 domain UP17_24905 cd3edcf870b1a2da1e58583426c51a2c 472 SUPERFAMILY SSF51261 274 470 8.37E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_24905 cd3edcf870b1a2da1e58583426c51a2c 472 Pfam PF07501 G5 domain 268 342 6.4E-13 T 11-10-2018 IPR011098 G5 domain UP17_10395 666f8854d122f3ad1ecde9fecf61bfbe 122 SUPERFAMILY SSF52833 10 98 1.68E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_10395 666f8854d122f3ad1ecde9fecf61bfbe 122 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 10 64 3.8E-6 T 11-10-2018 UP17_10395 666f8854d122f3ad1ecde9fecf61bfbe 122 Gene3D G3DSA:3.40.30.10 9 104 5.6E-20 T 11-10-2018 UP17_24230 b6d34d969e897dc739e46a638769d0cd 349 SUPERFAMILY SSF55821 20 216 2.04E-62 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily UP17_24230 b6d34d969e897dc739e46a638769d0cd 349 PIRSF PIRSF004930 1 347 7.1E-130 T 11-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 UP17_24230 b6d34d969e897dc739e46a638769d0cd 349 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 341 1.6E-27 T 11-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain UP17_24230 b6d34d969e897dc739e46a638769d0cd 349 Pfam PF01300 Telomere recombination 27 203 2.5E-56 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 UP17_24230 b6d34d969e897dc739e46a638769d0cd 349 Gene3D G3DSA:3.40.50.11030 220 349 7.7E-39 T 11-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily UP17_24230 b6d34d969e897dc739e46a638769d0cd 349 Gene3D G3DSA:3.90.870.10 3 218 1.9E-80 T 11-10-2018 UP17_24230 b6d34d969e897dc739e46a638769d0cd 349 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 18 214 3.4E-64 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 UP17_03030 eee1767957ddb4604dc871391aceab65 113 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 107 4.4E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_03030 eee1767957ddb4604dc871391aceab65 113 Gene3D G3DSA:3.10.180.10 1 111 7.0E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_03030 eee1767957ddb4604dc871391aceab65 113 SUPERFAMILY SSF54593 9 111 1.14E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_05225 5c265441b584f09eff5aa8622babed52 474 Gene3D G3DSA:3.50.50.60 11 338 1.9E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 1.2E-36 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.2E-36 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 1.2E-36 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.2E-36 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 1.2E-36 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 2.3E-67 T 11-10-2018 UP17_05225 5c265441b584f09eff5aa8622babed52 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 UP17_05225 5c265441b584f09eff5aa8622babed52 474 SUPERFAMILY SSF55424 351 471 2.06E-38 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_05225 5c265441b584f09eff5aa8622babed52 474 PIRSF PIRSF000350 2 465 9.6E-90 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 UP17_05225 5c265441b584f09eff5aa8622babed52 474 SUPERFAMILY SSF51905 8 341 8.43E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_05225 5c265441b584f09eff5aa8622babed52 474 Gene3D G3DSA:3.50.50.60 157 279 1.9E-108 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_05225 5c265441b584f09eff5aa8622babed52 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 333 3.5E-66 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_05225 5c265441b584f09eff5aa8622babed52 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 471 1.1E-163 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 UP17_05225 5c265441b584f09eff5aa8622babed52 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 2.8E-32 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 UP17_05225 5c265441b584f09eff5aa8622babed52 474 Gene3D G3DSA:3.30.390.30 351 471 1.2E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 UP17_10830 e1073d97321ed95eb81a682c2b76fe6c 251 SUPERFAMILY SSF56281 24 237 6.73E-38 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_10830 e1073d97321ed95eb81a682c2b76fe6c 251 Gene3D G3DSA:3.60.15.10 1 242 3.9E-97 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_10830 e1073d97321ed95eb81a682c2b76fe6c 251 SMART SM00849 34 236 9.5E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_10830 e1073d97321ed95eb81a682c2b76fe6c 251 Pfam PF00753 Metallo-beta-lactamase superfamily 33 236 6.4E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_00200 cdf5071934b6912d67e0d2682301f5fe 276 Pfam PF04468 PSP1 C-terminal conserved region 61 146 1.5E-29 T 11-10-2018 IPR007557 PSP1, C-terminal UP17_04685 860682e55aec6a4e62bb5a882efff094 175 Pfam PF03358 NADPH-dependent FMN reductase 1 135 5.3E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 UP17_04685 860682e55aec6a4e62bb5a882efff094 175 Gene3D G3DSA:3.40.50.360 1 173 6.1E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_04685 860682e55aec6a4e62bb5a882efff094 175 SUPERFAMILY SSF52218 1 164 3.52E-38 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_08380 09a13a2dd450d30b819ac68ecdc8f28f 422 Gene3D G3DSA:3.90.1150.60 17 411 1.6E-183 T 11-10-2018 UP17_08380 09a13a2dd450d30b819ac68ecdc8f28f 422 SUPERFAMILY SSF53383 58 398 1.18E-49 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_08380 09a13a2dd450d30b819ac68ecdc8f28f 422 Gene3D G3DSA:3.40.640.10 58 271 1.6E-183 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_08380 09a13a2dd450d30b819ac68ecdc8f28f 422 Pfam PF06838 Methionine gamma-lyase 13 414 5.2E-211 T 11-10-2018 IPR009651 Putative methionine gamma-lyase UP17_18820 6ec9b0b594059cf82a97eb186a5125f3 342 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 328 3.2E-76 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 UP17_18820 6ec9b0b594059cf82a97eb186a5125f3 342 Gene3D G3DSA:3.20.20.70 1 340 3.3E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_18820 6ec9b0b594059cf82a97eb186a5125f3 342 SUPERFAMILY SSF51395 1 340 4.89E-107 T 11-10-2018 UP17_09495 7f149c1661da092ce9fbfebbdd36ad8b 278 SUPERFAMILY SSF55729 5 129 5.95E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_09495 7f149c1661da092ce9fbfebbdd36ad8b 278 Gene3D G3DSA:3.40.630.30 8 130 1.8E-8 T 11-10-2018 UP17_06065 f5b8f8b35e2d64d5909fb0bd92202b6d 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 196 7.6E-12 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_06065 f5b8f8b35e2d64d5909fb0bd92202b6d 247 Gene3D G3DSA:3.60.21.10 1 245 2.9E-61 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_06065 f5b8f8b35e2d64d5909fb0bd92202b6d 247 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 1.2E-5 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_06065 f5b8f8b35e2d64d5909fb0bd92202b6d 247 PRINTS PR00114 Serine/threonine phosphatase family signature 40 67 1.2E-5 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_06065 f5b8f8b35e2d64d5909fb0bd92202b6d 247 SUPERFAMILY SSF56300 1 221 2.89E-40 T 11-10-2018 UP17_10010 e156afe702e7a1d85de751df7cb0a0d1 304 Pfam PF01497 Periplasmic binding protein 43 281 3.6E-30 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain UP17_10010 e156afe702e7a1d85de751df7cb0a0d1 304 Gene3D G3DSA:3.40.50.1980 31 143 1.6E-19 T 11-10-2018 UP17_10010 e156afe702e7a1d85de751df7cb0a0d1 304 SUPERFAMILY SSF53807 42 288 1.53E-49 T 11-10-2018 UP17_10010 e156afe702e7a1d85de751df7cb0a0d1 304 Gene3D G3DSA:3.40.50.1980 144 303 8.9E-38 T 11-10-2018 UP17_20545 ff0ebba390d8f2c82930cacd13bd9987 230 Gene3D G3DSA:3.20.20.70 1 230 3.2E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_20545 ff0ebba390d8f2c82930cacd13bd9987 230 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 6 229 39.502 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 UP17_20545 ff0ebba390d8f2c82930cacd13bd9987 230 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 30 230 3.0E-64 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 UP17_20545 ff0ebba390d8f2c82930cacd13bd9987 230 SUPERFAMILY SSF51366 6 228 2.26E-54 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_17105 548c9450cce16dca2215aaed221fb9b4 309 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 85 226 7.8E-53 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_17105 548c9450cce16dca2215aaed221fb9b4 309 Gene3D G3DSA:1.10.260.150 50 309 1.7E-95 T 11-10-2018 UP17_17105 548c9450cce16dca2215aaed221fb9b4 309 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 10 308 49.675 T 11-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU UP17_17105 548c9450cce16dca2215aaed221fb9b4 309 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 84 227 1.4E-52 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 Gene3D G3DSA:1.10.3140.10 1 142 3.5E-33 T 11-10-2018 UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 289 476 3.8E-60 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 SUPERFAMILY SSF56645 4 271 1.48E-57 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 Gene3D G3DSA:1.20.140.10 279 478 9.6E-76 T 11-10-2018 UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 PIRSF PIRSF000331 1 478 1.7E-124 T 11-10-2018 IPR004925 HpaB/PvcC/4-BUDH UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 270 6.3E-74 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 SUPERFAMILY SSF47203 261 477 2.93E-57 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_22410 9b2e943eeb1da7bf04df7b48a713a05b 478 Gene3D G3DSA:2.40.110.10 143 272 9.8E-36 T 11-10-2018 UP17_24815 2ff9c0fa2b98d353811504bb559b0f32 442 SUPERFAMILY SSF51905 5 274 1.14E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_24815 2ff9c0fa2b98d353811504bb559b0f32 442 Gene3D G3DSA:3.50.50.60 1 428 7.6E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_24815 2ff9c0fa2b98d353811504bb559b0f32 442 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 7 345 1.2E-122 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 6 496 5.6E-225 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PIRSF PIRSF006615 7 502 5.2E-199 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 Gene3D G3DSA:1.10.1370.30 5 502 3.9E-211 T 11-10-2018 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 SUPERFAMILY SSF55486 11 496 2.57E-122 T 11-10-2018 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 229 245 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 380 397 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 246 265 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 149 169 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 334 353 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 448 466 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 266 285 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 403 424 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_15080 81f33be11e5d92e2de06b6546bca52b7 503 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 293 309 2.4E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 2.7E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 SUPERFAMILY SSF53901 3 267 5.01E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 SUPERFAMILY SSF53901 269 388 1.34E-41 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 Gene3D G3DSA:3.40.47.10 126 387 2.2E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 Pfam PF00108 Thiolase, N-terminal domain 4 260 1.5E-86 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 Gene3D G3DSA:3.40.47.10 6 274 2.2E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 Pfam PF02803 Thiolase, C-terminal domain 268 389 4.1E-46 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 PIRSF PIRSF000429 1 391 3.0E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 UP17_19640 a43276c55da3d5487c3632c80c356fe8 393 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 UP17_14405 bc6d396bbc5c10bb9d018bf85ed06703 259 SUPERFAMILY SSF53335 3 257 1.48E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_14405 bc6d396bbc5c10bb9d018bf85ed06703 259 Gene3D G3DSA:3.40.50.150 69 255 2.8E-39 T 11-10-2018 UP17_14405 bc6d396bbc5c10bb9d018bf85ed06703 259 Pfam PF04445 Putative SAM-dependent methyltransferase 39 230 4.1E-18 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 UP17_07580 5bb053b930fd46fda39279df96b52b56 294 Pfam PF03313 Serine dehydratase alpha chain 15 274 2.2E-74 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit UP17_07580 5bb053b930fd46fda39279df96b52b56 294 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 288 8.2E-145 T 11-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_01255 33f9562e2c92be7c64258e896a36029e 252 SUPERFAMILY SSF53474 19 244 2.3E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_01255 33f9562e2c92be7c64258e896a36029e 252 Pfam PF12146 Serine aminopeptidase, S33 22 223 2.2E-25 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 UP17_01255 33f9562e2c92be7c64258e896a36029e 252 Gene3D G3DSA:3.40.50.1820 2 245 6.7E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_01255 33f9562e2c92be7c64258e896a36029e 252 PIRSF PIRSF017388 4 246 6.9E-64 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 UP17_08875 6cb672e24a6c7f511640f73643976db4 469 TIGRFAM TIGR04383 acidic_w_LPXTA: processed acidic surface protein 160 468 1.4E-71 T 11-10-2018 IPR030832 Processed acidic surface protein UP17_08875 6cb672e24a6c7f511640f73643976db4 469 TIGRFAM TIGR04383 acidic_w_LPXTA: processed acidic surface protein 1 139 3.6E-28 T 11-10-2018 IPR030832 Processed acidic surface protein UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 78 3.0E-21 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 Pfam PF00588 SpoU rRNA Methylase family 96 236 2.8E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 242 2.3E-84 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 SUPERFAMILY SSF55315 3 76 2.47E-18 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 Gene3D G3DSA:3.30.1330.30 1 74 7.5E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 Gene3D G3DSA:3.40.1280.10 75 243 7.1E-56 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 SMART SM00967 5 79 5.4E-21 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 UP17_00600 5136f256320e2a40fbc82a8e25595cce 247 SUPERFAMILY SSF75217 67 243 8.5E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases UP17_00660 36b0d452497fc8141ceb4be2228e2dd4 82 Gene3D G3DSA:3.30.1330.30 1 80 2.2E-19 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_00660 36b0d452497fc8141ceb4be2228e2dd4 82 SUPERFAMILY SSF55315 5 81 1.94E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_00660 36b0d452497fc8141ceb4be2228e2dd4 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 81 5.2E-11 T 11-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 UP17_00660 36b0d452497fc8141ceb4be2228e2dd4 82 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 82 22.935 T 11-10-2018 IPR023460 Ribosomal protein L7Ae, putative UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 Gene3D G3DSA:3.40.50.880 1 188 1.0E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.4E-6 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.4E-6 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.6E-13 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.6E-13 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.6E-13 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 SUPERFAMILY SSF52317 1 189 6.88E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 2.9E-71 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.9E-33 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.9E-33 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.9E-33 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.9E-33 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.9E-33 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.9E-33 T 11-10-2018 UP17_07010 9db6634575b49bdeab864dcb2ada4697 201 Pfam PF00117 Glutamine amidotransferase class-I 3 186 2.0E-52 T 11-10-2018 IPR017926 Glutamine amidotransferase UP17_19535 94d54c835d553a8a35cb6c8d8dedc0dd 452 SUPERFAMILY SSF54826 14 144 1.06E-32 T 11-10-2018 UP17_19535 94d54c835d553a8a35cb6c8d8dedc0dd 452 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 14 452 4.7E-265 T 11-10-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 UP17_19535 94d54c835d553a8a35cb6c8d8dedc0dd 452 Gene3D G3DSA:3.20.20.120 146 406 1.5E-181 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_19535 94d54c835d553a8a35cb6c8d8dedc0dd 452 Gene3D G3DSA:3.30.390.10 17 420 1.5E-181 T 11-10-2018 IPR029017 Enolase-like, N-terminal UP17_19535 94d54c835d553a8a35cb6c8d8dedc0dd 452 SUPERFAMILY SSF51604 146 421 1.09E-83 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_19535 94d54c835d553a8a35cb6c8d8dedc0dd 452 Pfam PF13378 Enolase C-terminal domain-like 196 412 4.0E-36 T 11-10-2018 IPR029065 Enolase C-terminal domain-like UP17_19535 94d54c835d553a8a35cb6c8d8dedc0dd 452 SMART SM00922 192 292 2.1E-14 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal UP17_14490 17c3e9560a161363182d5247d8a023ca 507 Pfam PF02652 L-lactate permease 1 499 1.4E-65 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 UP17_22365 7ab8881461e026cf8312b6eaf704acc3 131 SUPERFAMILY SSF54593 3 126 5.37E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_22365 7ab8881461e026cf8312b6eaf704acc3 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 46 9.5E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_22365 7ab8881461e026cf8312b6eaf704acc3 131 Gene3D G3DSA:3.10.180.10 3 128 5.4E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_14900 cdc92048cec33164b8f056000a78a8aa 233 Gene3D G3DSA:3.20.20.70 1 227 1.2E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_14900 cdc92048cec33164b8f056000a78a8aa 233 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 8 228 36.958 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 UP17_14900 cdc92048cec33164b8f056000a78a8aa 233 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 32 227 3.2E-61 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 UP17_14900 cdc92048cec33164b8f056000a78a8aa 233 SUPERFAMILY SSF51366 9 225 1.73E-52 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_10095 7eee15276cef40f970f16782a7521b02 316 Gene3D G3DSA:3.20.20.150 1 240 4.7E-45 T 11-10-2018 UP17_10095 7eee15276cef40f970f16782a7521b02 316 SUPERFAMILY SSF51658 19 240 4.98E-34 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily UP17_10095 7eee15276cef40f970f16782a7521b02 316 Pfam PF01261 Xylose isomerase-like TIM barrel 26 217 8.8E-22 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain UP17_18485 7be5b84a774ae2884fe8f051690f30c3 370 SUPERFAMILY SSF144052 1 359 3.92E-113 T 11-10-2018 UP17_18485 7be5b84a774ae2884fe8f051690f30c3 370 Pfam PF02073 Thermophilic metalloprotease (M29) 3 355 2.1E-60 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_18485 7be5b84a774ae2884fe8f051690f30c3 370 Gene3D G3DSA:3.40.1830.10 2 164 3.9E-13 T 11-10-2018 IPR035097 Peptidase M29, N-terminal UP17_13190 0d6dfed19621b752b425a011d6e50428 309 SUPERFAMILY SSF161098 87 286 9.32E-20 T 11-10-2018 IPR035906 MetI-like superfamily UP17_13190 0d6dfed19621b752b425a011d6e50428 309 Gene3D G3DSA:1.10.3720.10 83 302 1.6E-21 T 11-10-2018 IPR035906 MetI-like superfamily UP17_13190 0d6dfed19621b752b425a011d6e50428 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 1.5E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 Gene3D G3DSA:3.40.50.720 1 259 3.7E-72 T 11-10-2018 UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 Pfam PF00106 short chain dehydrogenase 6 191 3.4E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 SUPERFAMILY SSF51735 4 257 5.46E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 8.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10945 b2b53a62de9d5bfbdd6212a8ceb42452 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.6E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_09705 a76afa6649b128fc0ba53f9357b39160 580 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 64 159 2.0E-32 T 11-10-2018 IPR032093 Phospholipase D, N-terminal UP17_09705 a76afa6649b128fc0ba53f9357b39160 580 Gene3D G3DSA:2.60.40.380 54 162 8.5E-42 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 UP17_09705 a76afa6649b128fc0ba53f9357b39160 580 Pfam PF09423 PhoD-like phosphatase 172 509 1.8E-121 T 11-10-2018 IPR018946 Alkaline phosphatase D-related UP17_09705 a76afa6649b128fc0ba53f9357b39160 580 SUPERFAMILY SSF56300 169 512 1.99E-41 T 11-10-2018 UP17_09705 a76afa6649b128fc0ba53f9357b39160 580 Gene3D G3DSA:3.60.21.70 163 580 1.9E-176 T 11-10-2018 IPR038607 PhoD-like superfamily UP17_02720 9c365008248f0df06eea172082958704 171 Gene3D G3DSA:3.40.50.300 7 171 5.0E-42 T 11-10-2018 UP17_02720 9c365008248f0df06eea172082958704 171 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 8 138 3.9E-27 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 UP17_02720 9c365008248f0df06eea172082958704 171 SUPERFAMILY SSF52540 6 140 4.2E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02720 9c365008248f0df06eea172082958704 171 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 8 124 9.4E-27 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 UP17_04460 ea751c604cb21467dbf666bbf94d7017 69 Gene3D G3DSA:3.30.70.100 1 69 3.5E-6 T 11-10-2018 UP17_04460 ea751c604cb21467dbf666bbf94d7017 69 SUPERFAMILY SSF55008 1 68 2.49E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 UP17_11635 747b7a6dcbf9f33d24c24acf3285c264 123 SUPERFAMILY SSF58104 14 99 1.28E-5 T 11-10-2018 UP17_11635 747b7a6dcbf9f33d24c24acf3285c264 123 Pfam PF06103 Bacterial protein of unknown function (DUF948) 11 94 9.3E-18 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 UP17_11635 747b7a6dcbf9f33d24c24acf3285c264 123 Gene3D G3DSA:1.10.287.950 5 118 3.0E-5 T 11-10-2018 UP17_11250 3c67ca124079973f1eab88df989fdae9 286 Pfam PF03466 LysR substrate binding domain 89 284 1.3E-33 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_11250 3c67ca124079973f1eab88df989fdae9 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 1.3E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11250 3c67ca124079973f1eab88df989fdae9 286 SUPERFAMILY SSF46785 1 111 1.34E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_11250 3c67ca124079973f1eab88df989fdae9 286 Gene3D G3DSA:3.40.190.290 83 283 4.2E-74 T 11-10-2018 UP17_11250 3c67ca124079973f1eab88df989fdae9 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11250 3c67ca124079973f1eab88df989fdae9 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11250 3c67ca124079973f1eab88df989fdae9 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_11250 3c67ca124079973f1eab88df989fdae9 286 Gene3D G3DSA:1.10.10.10 1 82 2.3E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_11250 3c67ca124079973f1eab88df989fdae9 286 SUPERFAMILY SSF53850 89 283 3.72E-30 T 11-10-2018 UP17_12180 bfc4eb38e323743428cd2d34355b15e2 381 Gene3D G3DSA:3.90.1510.10 42 276 8.6E-137 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 UP17_12180 bfc4eb38e323743428cd2d34355b15e2 381 SUPERFAMILY SSF110738 1 373 9.55E-131 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 UP17_12180 bfc4eb38e323743428cd2d34355b15e2 381 PIRSF PIRSF006078 1 378 7.0E-134 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 UP17_12180 bfc4eb38e323743428cd2d34355b15e2 381 Pfam PF02595 Glycerate kinase family 3 373 5.4E-144 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 UP17_12180 bfc4eb38e323743428cd2d34355b15e2 381 Gene3D G3DSA:3.40.50.10350 1 362 8.6E-137 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold UP17_12180 bfc4eb38e323743428cd2d34355b15e2 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 373 2.0E-146 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 UP17_21155 29e4add005be6f32bc688edde27257c5 202 Gene3D G3DSA:1.10.357.10 5 188 3.5E-46 T 11-10-2018 UP17_21155 29e4add005be6f32bc688edde27257c5 202 SUPERFAMILY SSF46689 7 74 3.29E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_21155 29e4add005be6f32bc688edde27257c5 202 Pfam PF14278 Transcriptional regulator C-terminal region 93 170 4.2E-15 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type UP17_21155 29e4add005be6f32bc688edde27257c5 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 60 5.7E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_21395 0470cd561c184ecedd4033a5911050af 437 SUPERFAMILY SSF56784 44 369 3.67E-27 T 11-10-2018 IPR036412 HAD-like superfamily UP17_21395 0470cd561c184ecedd4033a5911050af 437 Gene3D G3DSA:1.20.1440.320 104 261 5.3E-130 T 11-10-2018 UP17_21395 0470cd561c184ecedd4033a5911050af 437 Pfam PF12710 haloacid dehalogenase-like hydrolase 275 368 2.2E-7 T 11-10-2018 UP17_21395 0470cd561c184ecedd4033a5911050af 437 Gene3D G3DSA:3.40.50.1000 50 411 5.3E-130 T 11-10-2018 IPR023214 HAD superfamily UP17_18980 e91a0112d57945d89ad0f282fcdee0c4 81 SUPERFAMILY SSF58104 24 78 1.01E-5 T 11-10-2018 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 60.227 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 SUPERFAMILY SSF50465 303 395 3.17E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 Gene3D G3DSA:3.40.50.300 2 203 1.9E-71 T 11-10-2018 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 Gene3D G3DSA:2.40.30.10 206 335 1.7E-53 T 11-10-2018 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.0E-60 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 2.4E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 SUPERFAMILY SSF50447 203 302 1.2E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 SUPERFAMILY SSF52540 6 219 1.65E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.4E-232 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 Gene3D G3DSA:2.40.30.10 339 393 5.1E-27 T 11-10-2018 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 8.9E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 UP17_00680 aa5210d6456a3b742327ec61a699b7fd 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 6.5E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal UP17_13575 e6d870e64433fd23590e5e278adce63d 290 PIRSF PIRSF006483 1 289 6.1E-97 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_13575 e6d870e64433fd23590e5e278adce63d 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 20 222 3.0E-66 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_13575 e6d870e64433fd23590e5e278adce63d 290 Gene3D G3DSA:3.30.70.120 198 274 2.7E-24 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_13575 e6d870e64433fd23590e5e278adce63d 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 1.9E-22 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 UP17_22555 0585c385ee21e7113daa4f2f419c67f0 227 Pfam PF12207 Domain of unknown function (DUF3600) 64 223 5.5E-68 T 11-10-2018 IPR022019 Domain of unknown function DUF3600 UP17_22555 0585c385ee21e7113daa4f2f419c67f0 227 Gene3D G3DSA:1.10.3950.10 68 225 7.9E-63 T 11-10-2018 IPR038267 Putative ECF-type sigma factor negative effector UP17_01540 a1da855903e5587ac9bf86841c132784 168 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 33.963 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_01540 a1da855903e5587ac9bf86841c132784 168 Pfam PF01967 MoaC family 15 152 8.1E-54 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_01540 a1da855903e5587ac9bf86841c132784 168 SUPERFAMILY SSF55040 11 155 5.23E-55 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_01540 a1da855903e5587ac9bf86841c132784 168 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.3E-62 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_01540 a1da855903e5587ac9bf86841c132784 168 Gene3D G3DSA:3.30.70.640 1 162 3.5E-66 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_00395 01ab4e38a25a3528a03b793124892438 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 2.0E-66 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 UP17_00395 01ab4e38a25a3528a03b793124892438 179 SUPERFAMILY SSF53271 2 177 7.03E-60 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_00395 01ab4e38a25a3528a03b793124892438 179 Pfam PF00156 Phosphoribosyl transferase domain 14 159 3.2E-24 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_00395 01ab4e38a25a3528a03b793124892438 179 Gene3D G3DSA:3.40.50.2020 1 179 2.1E-65 T 11-10-2018 UP17_14430 99d8afb22b465f7942b2c17f5e89a18c 214 Pfam PF01966 HD domain 28 125 3.1E-8 T 11-10-2018 IPR006674 HD domain UP17_14430 99d8afb22b465f7942b2c17f5e89a18c 214 SMART SM00471 21 135 7.4E-8 T 11-10-2018 IPR003607 HD/PDEase domain UP17_14430 99d8afb22b465f7942b2c17f5e89a18c 214 Gene3D G3DSA:1.10.472.50 1 99 1.8E-29 T 11-10-2018 UP17_14430 99d8afb22b465f7942b2c17f5e89a18c 214 SUPERFAMILY SSF109604 2 212 2.66E-64 T 11-10-2018 UP17_14430 99d8afb22b465f7942b2c17f5e89a18c 214 Gene3D G3DSA:1.20.58.1910 101 214 3.6E-46 T 11-10-2018 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 PIRSF PIRSF001500 1 284 5.8E-66 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 Gene3D G3DSA:3.40.190.10 1 96 1.4E-26 T 11-10-2018 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 Gene3D G3DSA:3.30.70.260 194 284 5.0E-24 T 11-10-2018 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 SUPERFAMILY SSF53850 4 190 2.39E-50 T 11-10-2018 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 SUPERFAMILY SSF55021 180 280 2.36E-22 T 11-10-2018 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 Gene3D G3DSA:3.40.190.10 97 173 7.4E-21 T 11-10-2018 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 229 236 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 UP17_17495 05dd49179bb18f80f9cbaf517b3adb54 291 Pfam PF00800 Prephenate dehydratase 5 185 4.1E-52 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 Gene3D G3DSA:3.30.9.50 42 273 5.0E-69 T 11-10-2018 UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 Gene3D G3DSA:3.50.50.60 9 344 5.0E-69 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 2.6E-14 T 11-10-2018 UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.6E-14 T 11-10-2018 UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 149 164 2.6E-14 T 11-10-2018 UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 2.6E-14 T 11-10-2018 UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 SUPERFAMILY SSF51905 5 376 7.07E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_08795 a81f093a6b3e67b78094c28e202ac0c6 398 Pfam PF01494 FAD binding domain 5 320 9.6E-18 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 UP17_14315 9a211f24127b3ed0a57da5d239bcd0c7 180 Pfam PF01625 Peptide methionine sulfoxide reductase 7 158 1.0E-61 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_14315 9a211f24127b3ed0a57da5d239bcd0c7 180 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 36.555 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_14315 9a211f24127b3ed0a57da5d239bcd0c7 180 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 157 3.7E-63 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_14315 9a211f24127b3ed0a57da5d239bcd0c7 180 Gene3D G3DSA:3.30.1060.10 1 165 3.2E-66 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_14315 9a211f24127b3ed0a57da5d239bcd0c7 180 SUPERFAMILY SSF55068 4 169 3.27E-71 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_25430 0d8dfbda222a70ca1deb23b26f9dcb03 381 Gene3D G3DSA:1.10.150.130 48 166 7.1E-13 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_25430 0d8dfbda222a70ca1deb23b26f9dcb03 381 SUPERFAMILY SSF56349 66 368 8.54E-38 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_25430 0d8dfbda222a70ca1deb23b26f9dcb03 381 Gene3D G3DSA:1.10.443.10 185 368 8.6E-30 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_25430 0d8dfbda222a70ca1deb23b26f9dcb03 381 Pfam PF00589 Phage integrase family 183 360 7.1E-24 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 Gene3D G3DSA:3.40.50.1860 5 253 5.9E-96 T 11-10-2018 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 253 8.8E-85 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 SUPERFAMILY SSF53681 4 105 1.67E-36 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 Gene3D G3DSA:3.40.50.1860 94 206 5.9E-96 T 11-10-2018 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 Hamap MF_00258 Glutamate racemase [murI]. 3 255 40.527 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 SUPERFAMILY SSF53681 110 262 2.09E-39 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_17835 bcf9ddf6d6e9672ff517789682fd8617 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 214 5.9E-40 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 UP17_06275 009cf027c24e581f967b003b42ca2483 410 Gene3D G3DSA:1.20.1720.10 22 401 3.6E-100 T 11-10-2018 UP17_06275 009cf027c24e581f967b003b42ca2483 410 PRINTS PR01035 Tetracycline resistance protein signature 32 48 2.6E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_06275 009cf027c24e581f967b003b42ca2483 410 PRINTS PR01035 Tetracycline resistance protein signature 289 310 2.6E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_06275 009cf027c24e581f967b003b42ca2483 410 PRINTS PR01035 Tetracycline resistance protein signature 89 113 2.6E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_06275 009cf027c24e581f967b003b42ca2483 410 PRINTS PR01035 Tetracycline resistance protein signature 116 137 2.6E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_06275 009cf027c24e581f967b003b42ca2483 410 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 19 400 5.3E-103 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 UP17_06275 009cf027c24e581f967b003b42ca2483 410 SUPERFAMILY SSF103473 14 408 2.35E-62 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_06275 009cf027c24e581f967b003b42ca2483 410 Pfam PF07690 Major Facilitator Superfamily 31 367 2.5E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 Pfam PF04539 Sigma-70 region 3 113 181 3.0E-14 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 SUPERFAMILY SSF88946 12 103 2.09E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 PRINTS PR00046 Major sigma-70 factor signature 238 249 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 PRINTS PR00046 Major sigma-70 factor signature 223 238 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 PRINTS PR00046 Major sigma-70 factor signature 206 218 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 PRINTS PR00046 Major sigma-70 factor signature 58 71 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 Pfam PF04542 Sigma-70 region 2 35 103 3.5E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 SUPERFAMILY SSF88659 107 182 1.13E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 Pfam PF04545 Sigma-70, region 4 202 251 3.4E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 SUPERFAMILY SSF88659 180 255 3.74E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 4.0E-87 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 Gene3D G3DSA:1.10.10.10 104 156 8.3E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 252 4.9E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 1 254 9.7E-126 T 11-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 Gene3D G3DSA:1.10.10.10 190 257 1.9E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01420 674dc6adebe04e5cd0806984fb952b8a 262 Gene3D G3DSA:1.20.120.1810 1 102 2.1E-14 T 11-10-2018 UP17_04705 85ab4bf7bc16bb721469cace7f6f6d3f 293 SUPERFAMILY SSF102114 3 287 3.53E-36 T 11-10-2018 UP17_04705 85ab4bf7bc16bb721469cace7f6f6d3f 293 Pfam PF04055 Radical SAM superfamily 9 116 1.6E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_04705 85ab4bf7bc16bb721469cace7f6f6d3f 293 Pfam PF13186 Iron-sulfur cluster-binding domain 220 285 4.0E-14 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain UP17_04825 e7578c9925796f3a5fd767c8fee4f5ee 290 SUPERFAMILY SSF103481 186 288 1.26E-17 T 11-10-2018 UP17_04825 e7578c9925796f3a5fd767c8fee4f5ee 290 Pfam PF00892 EamA-like transporter family 151 287 1.2E-25 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_04825 e7578c9925796f3a5fd767c8fee4f5ee 290 Pfam PF00892 EamA-like transporter family 6 139 1.5E-23 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_04825 e7578c9925796f3a5fd767c8fee4f5ee 290 SUPERFAMILY SSF103481 40 140 2.09E-12 T 11-10-2018 UP17_24755 02c8f8d6e47c045e9854354d1ac52ef9 251 Pfam PF06738 Putative threonine/serine exporter 12 250 2.9E-77 T 11-10-2018 IPR010619 Putative threonine/serine exporter UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 SUPERFAMILY SSF81301 8 139 1.96E-42 T 11-10-2018 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 246 390 1.9E-29 T 11-10-2018 IPR032810 CCA-adding enzyme, C-terminal UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 SUPERFAMILY SSF81891 141 394 7.98E-45 T 11-10-2018 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Gene3D G3DSA:1.20.58.560 247 338 1.2E-12 T 11-10-2018 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 169 228 6.2E-13 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Pfam PF01743 Poly A polymerase head domain 22 141 4.2E-37 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Gene3D G3DSA:3.30.460.10 3 142 2.6E-52 T 11-10-2018 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Gene3D G3DSA:1.10.246.80 339 397 4.9E-22 T 11-10-2018 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Hamap MF_01263 CCA-adding enzyme [cca]. 2 395 39.392 T 11-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 UP17_15275 84b394493c4eaaaa3f67fa5445e69436 397 Gene3D G3DSA:1.10.3090.10 143 246 1.7E-28 T 11-10-2018 UP17_18985 86496c46cb0a84b6727205d84d9fa597 161 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 133 1.0E-11 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_18985 86496c46cb0a84b6727205d84d9fa597 161 SUPERFAMILY SSF55961 9 153 5.5E-30 T 11-10-2018 UP17_18985 86496c46cb0a84b6727205d84d9fa597 161 Gene3D G3DSA:3.30.530.20 1 160 2.9E-37 T 11-10-2018 IPR023393 START-like domain superfamily UP17_02075 60a5602906c3312854fded57316166cd 191 SUPERFAMILY SSF55729 1 173 3.91E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_02075 60a5602906c3312854fded57316166cd 191 Pfam PF00583 Acetyltransferase (GNAT) family 46 166 4.4E-16 T 11-10-2018 IPR000182 GNAT domain UP17_02075 60a5602906c3312854fded57316166cd 191 Gene3D G3DSA:3.40.630.30 2 189 1.0E-49 T 11-10-2018 UP17_23335 85f4b99c54ea7e9bb49e3da82b4e3b75 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 153 1.5E-59 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_23335 85f4b99c54ea7e9bb49e3da82b4e3b75 173 SUPERFAMILY SSF55068 1 165 1.27E-68 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_23335 85f4b99c54ea7e9bb49e3da82b4e3b75 173 Pfam PF01625 Peptide methionine sulfoxide reductase 3 154 1.7E-58 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_23335 85f4b99c54ea7e9bb49e3da82b4e3b75 173 Gene3D G3DSA:3.30.1060.10 1 160 4.6E-63 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_23335 85f4b99c54ea7e9bb49e3da82b4e3b75 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 160 36.183 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 UP17_22445 24d114c9da255fc136255ffde5ba4cbe 180 SUPERFAMILY SSF110391 5 178 7.06E-60 T 11-10-2018 IPR035928 GlpP-like superfamily UP17_22445 24d114c9da255fc136255ffde5ba4cbe 180 PIRSF PIRSF016897 1 180 1.2E-61 T 11-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 UP17_22445 24d114c9da255fc136255ffde5ba4cbe 180 Gene3D G3DSA:3.20.20.400 1 179 1.2E-65 T 11-10-2018 IPR035928 GlpP-like superfamily UP17_22445 24d114c9da255fc136255ffde5ba4cbe 180 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 5 177 4.9E-62 T 11-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 UP17_00870 5576b1abf0dc63ed462402f20c519981 238 Gene3D G3DSA:3.40.630.40 39 234 2.5E-55 T 11-10-2018 UP17_00870 5576b1abf0dc63ed462402f20c519981 238 SMART SM00646 115 226 2.6E-32 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 UP17_00870 5576b1abf0dc63ed462402f20c519981 238 SUPERFAMILY SSF53187 41 230 3.77E-50 T 11-10-2018 UP17_00870 5576b1abf0dc63ed462402f20c519981 238 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 43 226 2.2E-48 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 UP17_00870 5576b1abf0dc63ed462402f20c519981 238 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 41 228 3.3E-80 T 11-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 UP17_24115 7b4b6a6e38dda5e81cdac2fc0bce85b9 335 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 14 332 24.82 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24115 7b4b6a6e38dda5e81cdac2fc0bce85b9 335 Pfam PF00146 NADH dehydrogenase 23 326 3.4E-125 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24115 7b4b6a6e38dda5e81cdac2fc0bce85b9 335 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 216 229 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_11530 00961cdb090a8f50eac33288800242e5 282 Pfam PF08543 Phosphomethylpyrimidine kinase 20 261 1.8E-23 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 UP17_11530 00961cdb090a8f50eac33288800242e5 282 SUPERFAMILY SSF53613 1 278 1.43E-51 T 11-10-2018 IPR029056 Ribokinase-like UP17_11530 00961cdb090a8f50eac33288800242e5 282 Gene3D G3DSA:3.40.1190.20 1 282 3.7E-63 T 11-10-2018 IPR029056 Ribokinase-like UP17_22085 71c8231e5a80dfd614c17cf27f679ac9 257 Pfam PF01925 Sulfite exporter TauE/SafE 12 245 7.6E-42 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 UP17_04725 2da874533e3778ed12e602cfa2b88396 369 Gene3D G3DSA:3.20.20.120 118 347 2.0E-132 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_04725 2da874533e3778ed12e602cfa2b88396 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 4 125 6.2E-15 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain UP17_04725 2da874533e3778ed12e602cfa2b88396 369 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 10 333 1.9E-119 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 UP17_04725 2da874533e3778ed12e602cfa2b88396 369 SMART SM00922 143 235 1.1E-19 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal UP17_04725 2da874533e3778ed12e602cfa2b88396 369 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 360 45.758 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 UP17_04725 2da874533e3778ed12e602cfa2b88396 369 SUPERFAMILY SSF51604 114 363 4.59E-64 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily UP17_04725 2da874533e3778ed12e602cfa2b88396 369 Gene3D G3DSA:3.30.390.10 9 360 2.0E-132 T 11-10-2018 IPR029017 Enolase-like, N-terminal UP17_04725 2da874533e3778ed12e602cfa2b88396 369 Pfam PF13378 Enolase C-terminal domain-like 149 353 2.4E-46 T 11-10-2018 IPR029065 Enolase C-terminal domain-like UP17_04725 2da874533e3778ed12e602cfa2b88396 369 SUPERFAMILY SSF54826 1 126 1.77E-32 T 11-10-2018 UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 Gene3D G3DSA:3.10.28.10 1 214 1.1E-67 T 11-10-2018 IPR027434 Homing endonuclease UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 6.1E-37 T 11-10-2018 IPR039518 WhiA, LAGLIDADG-like domain UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 Gene3D G3DSA:1.10.10.10 215 309 1.1E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 103 3.1E-35 T 11-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 Pfam PF02650 WhiA C-terminal HTH domain 220 304 8.2E-34 T 11-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.578 T 11-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 1.3E-129 T 11-10-2018 IPR033981 Sporulation regulator WhiA-like UP17_23510 451e2c8f5df21f91d7d6c5e5f303dc59 317 SUPERFAMILY SSF55608 120 221 8.08E-21 T 11-10-2018 IPR027434 Homing endonuclease UP17_08280 5be76b887855348c545e0c0390509847 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 2.0E-23 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 UP17_08280 5be76b887855348c545e0c0390509847 102 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 6.6E-33 T 11-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 UP17_08280 5be76b887855348c545e0c0390509847 102 Gene3D G3DSA:3.40.50.2300 1 102 1.7E-38 T 11-10-2018 UP17_08280 5be76b887855348c545e0c0390509847 102 SUPERFAMILY SSF52794 1 100 6.8E-37 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_24085 a62866c1529462a0284384821cf848fd 508 Pfam PF00361 Proton-conducting membrane transporter 131 431 1.1E-67 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24085 a62866c1529462a0284384821cf848fd 508 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 9 491 17.328 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 UP17_24085 a62866c1529462a0284384821cf848fd 508 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 13 490 7.4E-114 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 UP17_16140 72f45d5f821ba7f835bb907424e7da95 67 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 62 1.9E-17 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family UP17_16140 72f45d5f821ba7f835bb907424e7da95 67 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 1.4E-30 T 11-10-2018 IPR009570 Stage III sporulation protein AC UP17_02800 2560e4e7f7352f018d6c8431a4435756 294 SMART SM00478 128 288 1.1E-22 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_02800 2560e4e7f7352f018d6c8431a4435756 294 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 124 272 6.8E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_02800 2560e4e7f7352f018d6c8431a4435756 294 SUPERFAMILY SSF48150 108 287 1.36E-38 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 UP17_02800 2560e4e7f7352f018d6c8431a4435756 294 Gene3D G3DSA:1.10.1670.40 236 285 3.2E-51 T 11-10-2018 UP17_02800 2560e4e7f7352f018d6c8431a4435756 294 Gene3D G3DSA:1.10.340.30 117 235 3.2E-51 T 11-10-2018 UP17_05115 2bd446d7257f2af8311c2cda44eb6558 193 SUPERFAMILY SSF55729 2 176 1.23E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_05115 2bd446d7257f2af8311c2cda44eb6558 193 Pfam PF13302 Acetyltransferase (GNAT) domain 12 149 9.4E-18 T 11-10-2018 IPR000182 GNAT domain UP17_05115 2bd446d7257f2af8311c2cda44eb6558 193 Gene3D G3DSA:3.40.630.30 2 193 1.9E-40 T 11-10-2018 UP17_12450 91b0992bf2817cbe4c69c3b79fca2d6a 378 Gene3D G3DSA:3.40.50.300 102 311 4.0E-74 T 11-10-2018 UP17_12450 91b0992bf2817cbe4c69c3b79fca2d6a 378 SUPERFAMILY SSF52540 56 374 2.85E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12450 91b0992bf2817cbe4c69c3b79fca2d6a 378 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 68 373 2.3E-98 T 11-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_12450 91b0992bf2817cbe4c69c3b79fca2d6a 378 Pfam PF03308 ArgK protein 73 341 1.3E-98 T 11-10-2018 UP17_12450 91b0992bf2817cbe4c69c3b79fca2d6a 378 Gene3D G3DSA:1.10.287.130 314 376 1.4E-17 T 11-10-2018 UP17_12450 91b0992bf2817cbe4c69c3b79fca2d6a 378 Gene3D G3DSA:1.20.5.170 51 101 5.5E-16 T 11-10-2018 UP17_02780 d5e2ecc13b524d7865131cdbd9a3cd10 522 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 341 503 1.4E-53 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 UP17_02780 d5e2ecc13b524d7865131cdbd9a3cd10 522 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 7 282 1.9E-59 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 UP17_02780 d5e2ecc13b524d7865131cdbd9a3cd10 522 Gene3D G3DSA:3.20.130.10 319 504 2.9E-67 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 UP17_02780 d5e2ecc13b524d7865131cdbd9a3cd10 522 Pfam PF05681 Fumarate hydratase (Fumerase) 8 284 5.7E-69 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 UP17_02780 d5e2ecc13b524d7865131cdbd9a3cd10 522 Pfam PF05683 Fumarase C-terminus 292 504 5.8E-63 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 UP17_02780 d5e2ecc13b524d7865131cdbd9a3cd10 522 SUPERFAMILY SSF117457 332 503 9.81E-54 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 UP17_02780 d5e2ecc13b524d7865131cdbd9a3cd10 522 PIRSF PIRSF001394 1 521 4.4E-190 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 UP17_04610 f3492dc7b40c362dd3cc41bccbdb0af9 455 Gene3D G3DSA:3.30.465.40 3 231 7.9E-73 T 11-10-2018 UP17_04610 f3492dc7b40c362dd3cc41bccbdb0af9 455 Gene3D G3DSA:3.30.70.2740 332 413 1.9E-11 T 11-10-2018 UP17_04610 f3492dc7b40c362dd3cc41bccbdb0af9 455 Pfam PF02913 FAD linked oxidases, C-terminal domain 212 452 3.2E-59 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 UP17_04610 f3492dc7b40c362dd3cc41bccbdb0af9 455 Pfam PF01565 FAD binding domain 39 176 2.1E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UP17_04610 f3492dc7b40c362dd3cc41bccbdb0af9 455 Gene3D G3DSA:1.10.45.10 414 453 1.2E-10 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 UP17_04610 f3492dc7b40c362dd3cc41bccbdb0af9 455 SUPERFAMILY SSF55103 217 454 4.25E-63 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 UP17_04610 f3492dc7b40c362dd3cc41bccbdb0af9 455 SUPERFAMILY SSF56176 2 213 1.54E-66 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_21930 04c889f448ffda89450464223eb1e6a6 188 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 UP17_21930 04c889f448ffda89450464223eb1e6a6 188 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 130 165 4.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_21930 04c889f448ffda89450464223eb1e6a6 188 SUPERFAMILY SSF51161 2 184 1.37E-54 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_21930 04c889f448ffda89450464223eb1e6a6 188 SMART SM01266 5 59 7.0E-23 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 UP17_21930 04c889f448ffda89450464223eb1e6a6 188 Pfam PF12464 Maltose acetyltransferase 7 58 2.5E-18 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 UP17_21930 04c889f448ffda89450464223eb1e6a6 188 Gene3D G3DSA:2.160.10.10 1 186 9.8E-74 T 11-10-2018 UP17_09130 863ac0cccdff597d271bf62eae228255 392 Gene3D G3DSA:1.20.1090.10 186 387 2.8E-65 T 11-10-2018 UP17_09130 863ac0cccdff597d271bf62eae228255 392 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 UP17_09130 863ac0cccdff597d271bf62eae228255 392 SUPERFAMILY SSF56796 5 385 3.66E-126 T 11-10-2018 UP17_09130 863ac0cccdff597d271bf62eae228255 392 Gene3D G3DSA:3.40.50.1970 2 185 1.5E-62 T 11-10-2018 UP17_09130 863ac0cccdff597d271bf62eae228255 392 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 1.8E-122 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 UP17_12095 44037d211c7634f74a48c2512676e8e6 197 SUPERFAMILY SSF159888 9 126 1.96E-21 T 11-10-2018 UP17_12095 44037d211c7634f74a48c2512676e8e6 197 PIRSF PIRSF021308 1 197 2.7E-100 T 11-10-2018 IPR016786 Uncharacterised protein YdeI, bacterial UP17_12095 44037d211c7634f74a48c2512676e8e6 197 Pfam PF08818 Domain of unknown function (DU1801) 20 117 2.7E-14 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 UP17_12095 44037d211c7634f74a48c2512676e8e6 197 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 133 192 4.7E-18 T 11-10-2018 UP17_07465 fff3a570c3a9c294c9def20b7415c16e 211 Gene3D G3DSA:3.40.50.2020 1 211 3.4E-67 T 11-10-2018 UP17_07465 fff3a570c3a9c294c9def20b7415c16e 211 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 211 31.001 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07465 fff3a570c3a9c294c9def20b7415c16e 211 SUPERFAMILY SSF53271 4 202 1.31E-53 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_07465 fff3a570c3a9c294c9def20b7415c16e 211 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 8 177 8.4E-52 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 UP17_07465 fff3a570c3a9c294c9def20b7415c16e 211 Pfam PF00156 Phosphoribosyl transferase domain 45 160 4.8E-20 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_02150 3175d4505165086212081651394467a0 390 ProDom PD121987 PLASMID RESISTANT TELLURIUM KLAA KLAA/KILA MAINTENANCE RESISTANCE KILA TELLURITE 108 321 0.01 T 11-10-2018 UP17_02150 3175d4505165086212081651394467a0 390 Pfam PF05816 Toxic anion resistance protein (TelA) 59 386 2.7E-125 T 11-10-2018 IPR008863 Toxic anion resistance UP17_02150 3175d4505165086212081651394467a0 390 PIRSF PIRSF026508 22 390 5.2E-119 T 11-10-2018 IPR008863 Toxic anion resistance UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 SUPERFAMILY SSF46785 1 83 6.47E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 Gene3D G3DSA:3.40.190.290 90 297 7.4E-51 T 11-10-2018 UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 Pfam PF03466 LysR substrate binding domain 89 291 1.5E-42 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 Gene3D G3DSA:1.10.10.10 1 83 3.3E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 SUPERFAMILY SSF53850 88 294 6.65E-39 T 11-10-2018 UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.7E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_21970 7f189d5df01ea5d1093e16911e00e1cb 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_16555 9c81ac473d0cd23275b3c694d2aa4c6a 110 Gene3D G3DSA:3.10.350.10 54 107 2.0E-5 T 11-10-2018 IPR036779 LysM domain superfamily UP17_16555 9c81ac473d0cd23275b3c694d2aa4c6a 110 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 1 109 6.0E-14 T 11-10-2018 IPR020506 Uncharacterised protein family YqfZ UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 SUPERFAMILY SSF51161 282 380 1.91E-19 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 7 360 4.0E-145 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 99 107 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 Gene3D G3DSA:2.160.10.10 270 384 2.5E-29 T 11-10-2018 UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 3 377 48.246 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 Gene3D G3DSA:3.90.550.10 2 268 3.2E-84 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 321 344 0.0015 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 SUPERFAMILY SSF53448 4 340 1.13E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 12 31 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 UP17_12875 27c225bc17bc9e0d9d8fa597d05194cb 388 Pfam PF00483 Nucleotidyl transferase 8 261 4.2E-70 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 UP17_09625 9c4e9715a8258a2cf34ff31e51d72839 478 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 44 141 3.7E-18 T 11-10-2018 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 UP17_09625 9c4e9715a8258a2cf34ff31e51d72839 478 Gene3D G3DSA:2.60.40.380 44 145 5.8E-7 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 UP17_09625 9c4e9715a8258a2cf34ff31e51d72839 478 SUPERFAMILY SSF56300 146 402 3.14E-37 T 11-10-2018 UP17_09625 9c4e9715a8258a2cf34ff31e51d72839 478 Pfam PF00149 Calcineurin-like phosphoesterase 170 347 1.5E-14 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 UP17_09625 9c4e9715a8258a2cf34ff31e51d72839 478 SUPERFAMILY SSF49363 45 143 1.28E-12 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 UP17_09625 9c4e9715a8258a2cf34ff31e51d72839 478 Gene3D G3DSA:3.60.21.10 146 429 6.0E-43 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_13280 40c0d3b625cd2799fe0855bf712e46af 234 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 182 4.2E-68 T 11-10-2018 IPR022301 Integral membrane protein YjbE UP17_13280 40c0d3b625cd2799fe0855bf712e46af 234 Pfam PF03741 Integral membrane protein TerC family 14 182 3.4E-43 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 UP17_16740 ca62c4cd625a701bf31883cd7d94adea 309 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 4 305 2.4E-71 T 11-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 UP17_16740 ca62c4cd625a701bf31883cd7d94adea 309 Pfam PF02690 Na+/Pi-cotransporter 13 146 4.5E-32 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 UP17_16740 ca62c4cd625a701bf31883cd7d94adea 309 Pfam PF02690 Na+/Pi-cotransporter 156 284 4.9E-14 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 UP17_05010 1fe44cc052cefe28a55ef5e31992af69 71 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 6 67 2.2E-5 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05010 1fe44cc052cefe28a55ef5e31992af69 71 PRINTS PR00344 Bacterial sensor protein C-terminal signature 13 23 5.5E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05010 1fe44cc052cefe28a55ef5e31992af69 71 PRINTS PR00344 Bacterial sensor protein C-terminal signature 53 66 5.5E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05010 1fe44cc052cefe28a55ef5e31992af69 71 PRINTS PR00344 Bacterial sensor protein C-terminal signature 29 47 5.5E-6 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05010 1fe44cc052cefe28a55ef5e31992af69 71 Gene3D G3DSA:3.30.565.10 5 70 7.0E-11 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_05010 1fe44cc052cefe28a55ef5e31992af69 71 SUPERFAMILY SSF55874 6 65 1.29E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06005 fa0694c85b282058c0741907b4479d59 222 Gene3D G3DSA:3.30.70.1950 125 222 9.4E-29 T 11-10-2018 IPR038471 MecA, C-terminal domain superfamily UP17_06005 fa0694c85b282058c0741907b4479d59 222 Hamap MF_01124 Adapter protein MecA [mecA]. 1 221 26.414 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA UP17_06005 fa0694c85b282058c0741907b4479d59 222 PIRSF PIRSF029008 1 222 2.1E-70 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA UP17_06005 fa0694c85b282058c0741907b4479d59 222 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 216 3.7E-48 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA UP17_10160 5a183cc56d7bbfa46953a0b27a4d7fc8 430 Pfam PF07690 Major Facilitator Superfamily 16 373 3.1E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_10160 5a183cc56d7bbfa46953a0b27a4d7fc8 430 SUPERFAMILY SSF103473 4 416 2.49E-69 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_10160 5a183cc56d7bbfa46953a0b27a4d7fc8 430 Gene3D G3DSA:1.20.1250.20 215 421 1.6E-27 T 11-10-2018 UP17_10160 5a183cc56d7bbfa46953a0b27a4d7fc8 430 Gene3D G3DSA:1.20.1250.20 2 203 1.9E-41 T 11-10-2018 UP17_11650 f65dfb456609dfb439ec2b680bd61c4e 443 Pfam PF01943 Polysaccharide biosynthesis protein 5 291 7.8E-19 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 UP17_11650 f65dfb456609dfb439ec2b680bd61c4e 443 PIRSF PIRSF038958 1 442 4.5E-69 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type UP17_14620 ad0e7aa66b5ce8b86fd58161c124f01b 218 Pfam PF02080 TrkA-C domain 154 214 2.0E-13 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UP17_14620 ad0e7aa66b5ce8b86fd58161c124f01b 218 Gene3D G3DSA:3.40.50.720 2 138 1.0E-38 T 11-10-2018 UP17_14620 ad0e7aa66b5ce8b86fd58161c124f01b 218 SUPERFAMILY SSF116726 133 215 4.84E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_14620 ad0e7aa66b5ce8b86fd58161c124f01b 218 SUPERFAMILY SSF51735 5 137 4.22E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_14620 ad0e7aa66b5ce8b86fd58161c124f01b 218 Pfam PF02254 TrkA-N domain 8 121 1.8E-29 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 UP17_14620 ad0e7aa66b5ce8b86fd58161c124f01b 218 Gene3D G3DSA:3.30.70.1450 139 216 1.7E-25 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 1.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 1.8E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 Pfam PF02954 Bacterial regulatory protein, Fis family 431 471 2.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 SUPERFAMILY SSF55785 9 115 7.68E-12 T 11-10-2018 IPR035965 PAS domain superfamily UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 Gene3D G3DSA:3.40.50.300 141 327 5.9E-60 T 11-10-2018 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 Gene3D G3DSA:1.10.8.60 329 400 1.7E-20 T 11-10-2018 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 SMART SM00382 177 319 2.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 Gene3D G3DSA:1.10.10.60 401 476 1.7E-16 T 11-10-2018 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 122 2.4E-7 T 11-10-2018 IPR000014 PAS domain UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 SUPERFAMILY SSF52540 156 402 4.66E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 Gene3D G3DSA:3.30.450.20 2 120 7.7E-15 T 11-10-2018 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 Pfam PF13426 PAS domain 21 121 1.3E-9 T 11-10-2018 IPR000014 PAS domain UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 242 257 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 Pfam PF00158 Sigma-54 interaction domain 157 323 3.6E-62 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 SUPERFAMILY SSF46689 369 473 1.16E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19680 4229bf401ffe5fcb8fc40d14a69096f1 485 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site UP17_04150 87b52729f785d1b96e0c183d3e5b334c 255 Pfam PF00797 N-acetyltransferase 22 253 5.9E-40 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 UP17_04150 87b52729f785d1b96e0c183d3e5b334c 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 2.4E-7 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 UP17_04150 87b52729f785d1b96e0c183d3e5b334c 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 2.4E-7 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 UP17_04150 87b52729f785d1b96e0c183d3e5b334c 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 2.4E-7 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 UP17_04150 87b52729f785d1b96e0c183d3e5b334c 255 SUPERFAMILY SSF54001 10 254 6.13E-55 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_04150 87b52729f785d1b96e0c183d3e5b334c 255 Gene3D G3DSA:3.30.2140.20 1 254 5.2E-77 T 11-10-2018 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 Pfam PF13840 ACT domain 335 398 2.8E-14 T 11-10-2018 IPR027795 CASTOR, ACT domain UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 Pfam PF00696 Amino acid kinase family 3 230 5.0E-51 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 401 6.3E-148 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 SUPERFAMILY SSF55021 327 404 3.07E-22 T 11-10-2018 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 SUPERFAMILY SSF55021 248 325 3.93E-14 T 11-10-2018 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 SUPERFAMILY SSF53633 3 242 4.06E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 Gene3D G3DSA:3.40.1160.10 1 253 1.5E-90 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 Gene3D G3DSA:3.30.70.260 260 337 4.2E-48 T 11-10-2018 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 2.2E-121 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 Gene3D G3DSA:3.30.70.260 254 402 4.2E-48 T 11-10-2018 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 PIRSF PIRSF000726 1 60 1.0E-20 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_17875 3858fbe4b1fd3968a9fa4287d993a1ae 410 PIRSF PIRSF000726 52 408 4.3E-136 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 UP17_14165 e939d633da64a2a40ea9c98f17cb8a38 390 Gene3D G3DSA:3.90.1150.10 29 384 3.5E-115 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_14165 e939d633da64a2a40ea9c98f17cb8a38 390 Pfam PF00155 Aminotransferase class I and II 34 384 2.4E-66 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_14165 e939d633da64a2a40ea9c98f17cb8a38 390 Gene3D G3DSA:3.40.640.10 45 286 3.5E-115 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_14165 e939d633da64a2a40ea9c98f17cb8a38 390 SUPERFAMILY SSF53383 7 386 1.05E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_16480 6b247dc555691931ea0a7cf1fc139cd2 190 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 181 5.5E-55 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase UP17_16480 6b247dc555691931ea0a7cf1fc139cd2 190 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 181 1.6E-45 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase UP17_16480 6b247dc555691931ea0a7cf1fc139cd2 190 Gene3D G3DSA:3.40.50.10420 1 188 1.2E-66 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily UP17_16480 6b247dc555691931ea0a7cf1fc139cd2 190 PIRSF PIRSF006806 1 184 1.2E-52 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase UP17_16480 6b247dc555691931ea0a7cf1fc139cd2 190 SUPERFAMILY SSF100950 4 187 1.95E-53 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_19630 eacda12212c58ab113a0d9bb6ee02aa9 485 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_19630 eacda12212c58ab113a0d9bb6ee02aa9 485 Pfam PF00324 Amino acid permease 19 470 1.1E-140 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_19630 eacda12212c58ab113a0d9bb6ee02aa9 485 Gene3D G3DSA:1.20.1740.10 10 478 3.8E-62 T 11-10-2018 UP17_19630 eacda12212c58ab113a0d9bb6ee02aa9 485 PIRSF PIRSF006060 5 484 1.8E-82 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_17940 a747dfb04aa67c508376af9971331d89 86 SUPERFAMILY SSF102829 10 83 1.7E-19 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily UP17_17940 a747dfb04aa67c508376af9971331d89 86 Pfam PF05164 Cell division protein ZapA 10 82 2.9E-17 T 11-10-2018 IPR007838 Cell division protein ZapA-like UP17_17940 a747dfb04aa67c508376af9971331d89 86 Gene3D G3DSA:1.10.20.30 4 47 9.5E-6 T 11-10-2018 UP17_17615 89dad46d9f2582f428a677b78306bb3a 313 Gene3D G3DSA:3.30.1490.20 131 189 8.0E-6 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 UP17_17615 89dad46d9f2582f428a677b78306bb3a 313 SUPERFAMILY SSF56059 91 296 1.59E-41 T 11-10-2018 UP17_17615 89dad46d9f2582f428a677b78306bb3a 313 Pfam PF08443 RimK-like ATP-grasp domain 100 293 8.4E-43 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 UP17_17615 89dad46d9f2582f428a677b78306bb3a 313 Gene3D G3DSA:3.40.50.20 16 115 6.8E-16 T 11-10-2018 UP17_17615 89dad46d9f2582f428a677b78306bb3a 313 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 28 293 7.7E-64 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 UP17_17615 89dad46d9f2582f428a677b78306bb3a 313 Gene3D G3DSA:3.30.470.80 190 301 8.6E-36 T 11-10-2018 UP17_20850 1f9b6c01eab7ed0882a58a4bec17c32e 166 SUPERFAMILY SSF55729 1 165 9.26E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_20850 1f9b6c01eab7ed0882a58a4bec17c32e 166 Gene3D G3DSA:3.40.630.30 1 166 7.4E-46 T 11-10-2018 UP17_20850 1f9b6c01eab7ed0882a58a4bec17c32e 166 Pfam PF00583 Acetyltransferase (GNAT) family 34 139 1.0E-18 T 11-10-2018 IPR000182 GNAT domain UP17_10890 74c8e0ed004e48cb4ea8d8edb1c21244 429 Gene3D G3DSA:1.20.1250.20 4 203 1.7E-38 T 11-10-2018 UP17_10890 74c8e0ed004e48cb4ea8d8edb1c21244 429 Gene3D G3DSA:1.20.1250.20 225 416 3.9E-25 T 11-10-2018 UP17_10890 74c8e0ed004e48cb4ea8d8edb1c21244 429 PIRSF PIRSF002808 29 421 8.2E-34 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 UP17_10890 74c8e0ed004e48cb4ea8d8edb1c21244 429 Pfam PF07690 Major Facilitator Superfamily 42 372 1.6E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_10890 74c8e0ed004e48cb4ea8d8edb1c21244 429 SUPERFAMILY SSF103473 6 412 2.09E-68 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_15780 34744c7bb46ed0bb27a104d8e6ec5b4c 75 Pfam PF14004 Protein of unknown function (DUF4227) 8 75 5.1E-29 T 11-10-2018 IPR025321 Protein of unknown function DUF4227 UP17_18815 0954f33ef15d5e4fb768064629cf674e 103 SUPERFAMILY SSF52821 3 96 7.2E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_18815 0954f33ef15d5e4fb768064629cf674e 103 Pfam PF00581 Rhodanese-like domain 8 97 1.6E-13 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_18815 0954f33ef15d5e4fb768064629cf674e 103 Gene3D G3DSA:3.40.250.10 5 100 6.3E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_18815 0954f33ef15d5e4fb768064629cf674e 103 SMART SM00450 8 102 1.9E-14 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_22385 777b60775271d5188e791b4aae8c9721 513 Gene3D G3DSA:3.40.605.10 8 507 1.3E-189 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_22385 777b60775271d5188e791b4aae8c9721 513 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 4 513 1.1E-251 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 UP17_22385 777b60775271d5188e791b4aae8c9721 513 Pfam PF00171 Aldehyde dehydrogenase family 48 508 1.7E-157 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_22385 777b60775271d5188e791b4aae8c9721 513 SUPERFAMILY SSF53720 3 509 5.24E-156 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_22385 777b60775271d5188e791b4aae8c9721 513 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 513 68.396 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 UP17_22385 777b60775271d5188e791b4aae8c9721 513 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 284 291 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_22385 777b60775271d5188e791b4aae8c9721 513 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 312 323 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_22385 777b60775271d5188e791b4aae8c9721 513 Gene3D G3DSA:3.40.309.10 289 478 1.3E-189 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_11865 766eab44cd812a15285fe8c5e44a0860 416 PIRSF PIRSF000412 1 411 2.5E-175 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_11865 766eab44cd812a15285fe8c5e44a0860 416 Pfam PF00464 Serine hydroxymethyltransferase 3 380 2.1E-176 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_11865 766eab44cd812a15285fe8c5e44a0860 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 217 233 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_11865 766eab44cd812a15285fe8c5e44a0860 416 Gene3D G3DSA:3.40.640.10 32 283 7.4E-190 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_11865 766eab44cd812a15285fe8c5e44a0860 416 SUPERFAMILY SSF53383 3 410 2.06E-182 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_11865 766eab44cd812a15285fe8c5e44a0860 416 Gene3D G3DSA:3.90.1150.10 5 390 7.4E-190 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_11865 766eab44cd812a15285fe8c5e44a0860 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 2 411 53.543 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_22780 46ae56001c3e2f492f63c0494671556d 387 SUPERFAMILY SSF56796 2 385 5.1E-118 T 11-10-2018 UP17_22780 46ae56001c3e2f492f63c0494671556d 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 UP17_22780 46ae56001c3e2f492f63c0494671556d 387 Gene3D G3DSA:1.20.1090.10 185 386 1.4E-45 T 11-10-2018 UP17_22780 46ae56001c3e2f492f63c0494671556d 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 UP17_22780 46ae56001c3e2f492f63c0494671556d 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 365 2.1E-101 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 UP17_22780 46ae56001c3e2f492f63c0494671556d 387 Gene3D G3DSA:3.40.50.1970 1 184 3.5E-57 T 11-10-2018 UP17_14335 3f2286fc4edecf3c8d04e84fe4610845 196 Gene3D G3DSA:3.40.30.10 24 194 5.2E-55 T 11-10-2018 UP17_14335 3f2286fc4edecf3c8d04e84fe4610845 196 Pfam PF02630 SCO1/SenC 8 176 6.5E-42 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_14335 3f2286fc4edecf3c8d04e84fe4610845 196 SUPERFAMILY SSF52833 34 193 1.51E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_23855 96eca58107c07e7526518021f49c884d 265 Pfam PF01061 ABC-2 type transporter 18 222 4.4E-24 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 UP17_09820 05770381ed0ed6534e12cd0ee21cac67 199 Pfam PF00881 Nitroreductase family 9 177 7.3E-19 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_09820 05770381ed0ed6534e12cd0ee21cac67 199 SUPERFAMILY SSF55469 4 198 2.49E-71 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_09820 05770381ed0ed6534e12cd0ee21cac67 199 Gene3D G3DSA:3.40.109.10 2 199 5.0E-91 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 418 1.1E-144 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 SUPERFAMILY SSF102114 124 363 1.96E-56 T 11-10-2018 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 421 1.4E-148 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 SMART SM00729 143 360 2.3E-57 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 8.9E-26 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 Pfam PF04055 Radical SAM superfamily 149 318 2.1E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 Gene3D G3DSA:3.80.30.20 140 374 1.6E-87 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe UP17_16750 c31666d0606017c5850fb5f35f6269e8 445 Gene3D G3DSA:3.40.50.12160 3 133 9.7E-24 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily UP17_02400 9deb7ee67f5041b6787ad9b9ef463cef 314 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 10 237 7.5E-86 T 11-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 UP17_02400 9deb7ee67f5041b6787ad9b9ef463cef 314 PIRSF PIRSF000292 1 310 5.3E-101 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 UP17_02400 9deb7ee67f5041b6787ad9b9ef463cef 314 Gene3D G3DSA:2.60.40.420 111 269 4.0E-38 T 11-10-2018 IPR008972 Cupredoxin UP17_02400 9deb7ee67f5041b6787ad9b9ef463cef 314 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 48 106 1.8E-6 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02400 9deb7ee67f5041b6787ad9b9ef463cef 314 SUPERFAMILY SSF49503 123 267 2.28E-39 T 11-10-2018 IPR008972 Cupredoxin UP17_02400 9deb7ee67f5041b6787ad9b9ef463cef 314 SUPERFAMILY SSF81464 14 111 3.11E-19 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02400 9deb7ee67f5041b6787ad9b9ef463cef 314 Gene3D G3DSA:1.10.287.90 26 110 1.8E-27 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_16650 c1f411647c79ea3c8afa9ef7b806cd7e 269 Pfam PF03618 Kinase/pyrophosphorylase 6 261 1.9E-97 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 UP17_16650 c1f411647c79ea3c8afa9ef7b806cd7e 269 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 266 59.593 T 11-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein UP17_16650 c1f411647c79ea3c8afa9ef7b806cd7e 269 Gene3D G3DSA:3.40.50.300 174 269 2.4E-5 T 11-10-2018 UP17_15335 a6dd408dba7807d7304ae1d09f6787bc 224 PIRSF PIRSF000032 2 224 1.5E-100 T 11-10-2018 UP17_15335 a6dd408dba7807d7304ae1d09f6787bc 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 7.2E-50 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 UP17_15335 a6dd408dba7807d7304ae1d09f6787bc 224 SUPERFAMILY SSF81342 6 224 7.85E-60 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 UP17_15335 a6dd408dba7807d7304ae1d09f6787bc 224 Gene3D G3DSA:1.20.810.10 1 224 2.9E-86 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 Pfam PF00072 Response regulator receiver domain 5 115 3.4E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 SMART SM00862 157 233 6.5E-31 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 2.1E-30 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 SUPERFAMILY SSF46894 132 234 6.8E-33 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 Gene3D G3DSA:3.40.50.2300 1 134 5.6E-41 T 11-10-2018 UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 SMART SM00448 3 114 1.1E-48 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 Gene3D G3DSA:1.10.10.10 135 239 2.3E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18145 c2a75f215d546132890aca0b555a0e6b 239 SUPERFAMILY SSF52172 2 126 1.21E-45 T 11-10-2018 IPR011006 CheY-like superfamily UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 SUPERFAMILY SSF52402 253 377 5.44E-9 T 11-10-2018 UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 Gene3D G3DSA:3.40.50.300 416 626 8.3E-95 T 11-10-2018 UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 Gene3D G3DSA:3.40.50.300 19 231 1.2E-66 T 11-10-2018 UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 418 627 3.0E-95 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 232 3.7E-68 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 Gene3D G3DSA:3.40.50.620 281 388 5.4E-7 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 Gene3D G3DSA:3.40.50.620 635 772 6.5E-6 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 SUPERFAMILY SSF52402 650 772 6.95E-9 T 11-10-2018 UP17_14500 6ff34bf918cea9e6d16c3ba9490c9d78 774 SUPERFAMILY SSF52540 424 561 1.47E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02155 26029013d985033d6d4979f25782e114 189 Gene3D G3DSA:3.40.109.10 1 186 5.2E-50 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_02155 26029013d985033d6d4979f25782e114 189 Pfam PF00881 Nitroreductase family 7 168 7.5E-31 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_02155 26029013d985033d6d4979f25782e114 189 PIRSF PIRSF000232 1 189 1.6E-54 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like UP17_02155 26029013d985033d6d4979f25782e114 189 SUPERFAMILY SSF55469 1 187 4.06E-41 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 Pfam PF00375 Sodium:dicarboxylate symporter family 6 395 6.0E-119 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 290 313 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site UP17_20900 9b520b34f236056fcb38830961d39d6b 421 SUPERFAMILY SSF118215 5 396 4.71E-114 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 70 95 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 3.0E-35 T 11-10-2018 UP17_20900 9b520b34f236056fcb38830961d39d6b 421 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 32 47 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site UP17_20900 9b520b34f236056fcb38830961d39d6b 421 Gene3D G3DSA:1.10.3860.10 1 414 1.8E-121 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_17635 833f406eccfcafdae0b1df6902fdbe0c 347 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 8 312 1.3E-109 T 11-10-2018 IPR014253 Spore coat protein YsxE UP17_17635 833f406eccfcafdae0b1df6902fdbe0c 347 Gene3D G3DSA:3.90.1200.10 93 337 2.0E-19 T 11-10-2018 UP17_17635 833f406eccfcafdae0b1df6902fdbe0c 347 Gene3D G3DSA:3.30.200.20 2 91 1.5E-13 T 11-10-2018 UP17_17635 833f406eccfcafdae0b1df6902fdbe0c 347 SUPERFAMILY SSF56112 25 293 5.27E-15 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_14255 9392a9de7b5688614b6ea80817265c39 93 Pfam PF14122 YokU-like protein, putative antitoxin 3 89 1.2E-34 T 11-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU UP17_14255 9392a9de7b5688614b6ea80817265c39 93 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 3 91 3.5E-38 T 11-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU UP17_14255 9392a9de7b5688614b6ea80817265c39 93 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 49 1.4E-10 T 11-10-2018 IPR022453 Zinc finger, MqsA-type UP17_09840 ccba34340011344b4156f1212e916942 294 SUPERFAMILY SSF103481 185 283 3.66E-14 T 11-10-2018 UP17_09840 ccba34340011344b4156f1212e916942 294 Pfam PF00892 EamA-like transporter family 151 282 2.1E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09840 ccba34340011344b4156f1212e916942 294 Pfam PF00892 EamA-like transporter family 4 136 6.8E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09840 ccba34340011344b4156f1212e916942 294 SUPERFAMILY SSF103481 40 139 2.75E-13 T 11-10-2018 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 Gene3D G3DSA:3.30.565.10 268 416 8.3E-56 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 416 3.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 Gene3D G3DSA:1.10.287.130 209 267 8.3E-56 T 11-10-2018 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 SUPERFAMILY SSF55874 260 420 2.1E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 208 265 6.6E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 Pfam PF07694 5TMR of 5TMR-LYT 44 183 1.2E-8 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 SMART SM00387 313 419 3.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 SUPERFAMILY SSF47384 201 267 9.42E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 8.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_11830 0d0af7bbdc237bf18f8efc2eae141199 423 SMART SM00388 205 270 1.9E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 Gene3D G3DSA:1.10.730.10 432 556 3.0E-176 T 11-10-2018 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 Pfam PF00750 tRNA synthetases class I (R) 107 401 6.3E-27 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 Gene3D G3DSA:3.30.1360.70 2 112 5.7E-29 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 556 1.2E-175 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 9.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 9.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 9.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 9.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 SMART SM01016 9 95 9.1E-35 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 Gene3D G3DSA:3.40.50.620 124 431 3.0E-176 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 SUPERFAMILY SSF55190 3 115 1.83E-26 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 SMART SM00836 437 556 1.3E-54 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 94 1.7E-25 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 556 28.339 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 SUPERFAMILY SSF52374 117 448 2.03E-97 T 11-10-2018 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 Pfam PF05746 DALR anticodon binding domain 438 556 4.2E-40 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 UP17_24355 c4acf65a0be1e12d6884dd2d838a9e87 556 SUPERFAMILY SSF47323 432 556 8.5E-36 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 SUPERFAMILY SSF53067 157 392 1.43E-91 T 11-10-2018 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 Gene3D G3DSA:3.30.420.40 2 193 4.2E-69 T 11-10-2018 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 PIRSF PIRSF000722 1 397 6.9E-147 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 201 218 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 Gene3D G3DSA:3.30.420.40 194 399 1.3E-82 T 11-10-2018 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 PRINTS PR00471 Acetate kinase family signature 171 184 5.9E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 PRINTS PR00471 Acetate kinase family signature 201 222 5.9E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 PRINTS PR00471 Acetate kinase family signature 298 311 5.9E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 PRINTS PR00471 Acetate kinase family signature 4 15 5.9E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 PRINTS PR00471 Acetate kinase family signature 320 336 5.9E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 PRINTS PR00471 Acetate kinase family signature 374 386 5.9E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 SUPERFAMILY SSF53067 1 193 7.12E-65 T 11-10-2018 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 Hamap MF_00020 Acetate kinase [ackA]. 1 397 187.209 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 Pfam PF00871 Acetokinase family 3 387 2.5E-161 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_18300 2767f739d152cd6c3219425a8ddb9bb4 400 TIGRFAM TIGR00016 ackA: acetate kinase 2 393 1.3E-168 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 UP17_10035 60ae072762ae835902429fa68b930864 324 SUPERFAMILY SSF53850 36 322 1.27E-77 T 11-10-2018 UP17_10035 60ae072762ae835902429fa68b930864 324 Pfam PF16868 NMT1-like family 41 321 4.0E-90 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family UP17_10035 60ae072762ae835902429fa68b930864 324 Gene3D G3DSA:3.40.190.10 41 321 1.3E-101 T 11-10-2018 UP17_10035 60ae072762ae835902429fa68b930864 324 Gene3D G3DSA:3.40.190.10 123 259 1.3E-101 T 11-10-2018 UP17_10035 60ae072762ae835902429fa68b930864 324 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 321 2.8E-107 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family UP17_01210 ddbd87bfedd7ffa305765c8b4d85fa68 281 Gene3D G3DSA:1.20.1420.20 38 280 2.9E-93 T 11-10-2018 IPR038352 Imelysin-like domain superfamily UP17_01210 ddbd87bfedd7ffa305765c8b4d85fa68 281 Pfam PF09375 Imelysin 47 274 2.4E-42 T 11-10-2018 IPR018976 Imelysin-like domain UP17_14075 6215c5fb4f32e0612ebbbd767940e1ce 227 Pfam PF04172 LrgB-like family 13 225 3.0E-65 T 11-10-2018 IPR007300 CidB/LrgB family UP17_24540 96b34b6fb5b8bc2fadd0adee9c031b70 164 Gene3D G3DSA:1.10.1760.20 1 161 4.9E-20 T 11-10-2018 UP17_24540 96b34b6fb5b8bc2fadd0adee9c031b70 164 Pfam PF12822 ECF transporter, substrate-specific component 4 145 1.4E-11 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 UP17_17060 830c6e2e4d666c2fce020a845b32ab0e 381 SUPERFAMILY SSF53383 2 377 7.8E-106 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_17060 830c6e2e4d666c2fce020a845b32ab0e 381 Pfam PF00266 Aminotransferase class-V 4 365 1.3E-84 T 11-10-2018 IPR000192 Aminotransferase class V domain UP17_17060 830c6e2e4d666c2fce020a845b32ab0e 381 Gene3D G3DSA:3.90.1150.10 4 374 1.6E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_17060 830c6e2e4d666c2fce020a845b32ab0e 381 PIRSF PIRSF005572 1 380 2.9E-128 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 UP17_17060 830c6e2e4d666c2fce020a845b32ab0e 381 Gene3D G3DSA:3.40.640.10 15 256 1.6E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_17060 830c6e2e4d666c2fce020a845b32ab0e 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site UP17_06360 69bb87533eea5fcedc2eac0a1b64e125 457 Gene3D G3DSA:1.20.5.340 24 118 2.4E-5 T 11-10-2018 UP17_06360 69bb87533eea5fcedc2eac0a1b64e125 457 SUPERFAMILY SSF54001 325 451 2.68E-32 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_06360 69bb87533eea5fcedc2eac0a1b64e125 457 Pfam PF00877 NlpC/P60 family 347 448 1.1E-26 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_06360 69bb87533eea5fcedc2eac0a1b64e125 457 SUPERFAMILY SSF57997 35 267 4.58E-5 T 11-10-2018 UP17_06360 69bb87533eea5fcedc2eac0a1b64e125 457 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 26 205 0.002 T 11-10-2018 UP17_06360 69bb87533eea5fcedc2eac0a1b64e125 457 Gene3D G3DSA:3.90.1720.10 241 454 6.9E-40 T 11-10-2018 UP17_11540 dee47535e842d63d82be742660fc65b8 77 SUPERFAMILY SSF47413 3 65 5.35E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_11540 dee47535e842d63d82be742660fc65b8 77 SMART SM00530 10 64 0.0014 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_11540 dee47535e842d63d82be742660fc65b8 77 Gene3D G3DSA:1.10.260.40 4 68 1.6E-8 T 11-10-2018 UP17_11540 dee47535e842d63d82be742660fc65b8 77 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 10 68 9.2E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 SUPERFAMILY SSF56784 3 249 2.71E-72 T 11-10-2018 IPR036412 HAD-like superfamily UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 2.3E-123 T 11-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 Gene3D G3DSA:3.40.50.1000 6 242 8.0E-87 T 11-10-2018 IPR023214 HAD superfamily UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 Pfam PF13242 HAD-hyrolase-like 179 250 9.2E-24 T 11-10-2018 UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 107 4.7E-27 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 Gene3D G3DSA:3.40.50.1000 84 179 8.0E-87 T 11-10-2018 IPR023214 HAD superfamily UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 PIRSF PIRSF000915 1 251 3.1E-59 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA UP17_23055 72090012e9f3de5bbb6388adcbbf3d5d 255 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 228 5.8E-42 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA UP17_13075 b8010e9688db606045354d0819dc0d19 422 Gene3D G3DSA:1.20.1250.20 1 412 3.1E-53 T 11-10-2018 UP17_13075 b8010e9688db606045354d0819dc0d19 422 SUPERFAMILY SSF103473 4 409 9.94E-60 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_13075 b8010e9688db606045354d0819dc0d19 422 Pfam PF07690 Major Facilitator Superfamily 14 365 3.5E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_04910 3817f87f81b526ebb187958784252f5a 119 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 9 96 1.1E-31 T 11-10-2018 IPR009359 Phenylacetic acid degradation B UP17_04910 3817f87f81b526ebb187958784252f5a 119 Gene3D G3DSA:3.10.20.520 3 67 1.4E-13 T 11-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B UP17_04910 3817f87f81b526ebb187958784252f5a 119 Pfam PF06243 Phenylacetic acid degradation B 9 95 2.5E-25 T 11-10-2018 IPR009359 Phenylacetic acid degradation B UP17_11705 4684d8200790f3dacd7f020759bb1dc7 288 Pfam PF00795 Carbon-nitrogen hydrolase 6 259 2.9E-21 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 UP17_11705 4684d8200790f3dacd7f020759bb1dc7 288 SUPERFAMILY SSF56317 3 261 1.07E-43 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily UP17_11705 4684d8200790f3dacd7f020759bb1dc7 288 Gene3D G3DSA:3.60.110.10 2 280 8.2E-47 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily UP17_04250 767491770406b61298e97d663927f84b 258 Gene3D G3DSA:3.40.190.10 115 221 9.8E-82 T 11-10-2018 UP17_04250 767491770406b61298e97d663927f84b 258 Gene3D G3DSA:3.40.190.10 37 257 9.8E-82 T 11-10-2018 UP17_04250 767491770406b61298e97d663927f84b 258 Pfam PF13531 Bacterial extracellular solute-binding protein 37 257 8.1E-30 T 11-10-2018 UP17_04250 767491770406b61298e97d663927f84b 258 SUPERFAMILY SSF53850 34 257 4.84E-37 T 11-10-2018 UP17_13085 a74190b23e2cc146feb7ce238654bdd0 150 Gene3D G3DSA:3.30.1330.30 1 132 1.1E-43 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_13085 a74190b23e2cc146feb7ce238654bdd0 150 Pfam PF07997 Protein of unknown function (DUF1694) 5 118 2.5E-38 T 11-10-2018 IPR012543 Protein of unknown function DUF1694 UP17_13085 a74190b23e2cc146feb7ce238654bdd0 150 SUPERFAMILY SSF160515 5 123 8.63E-37 T 11-10-2018 UP17_13085 a74190b23e2cc146feb7ce238654bdd0 150 PIRSF PIRSF034303 2 147 1.1E-40 T 11-10-2018 IPR012543 Protein of unknown function DUF1694 UP17_25050 8d8e4cca9c29534e76ad773f77547dac 44 Pfam PF00468 Ribosomal protein L34 1 44 6.5E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_25050 8d8e4cca9c29534e76ad773f77547dac 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 5.2E-22 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_25050 8d8e4cca9c29534e76ad773f77547dac 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 5.0E-7 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_25050 8d8e4cca9c29534e76ad773f77547dac 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.173 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_25050 8d8e4cca9c29534e76ad773f77547dac 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 SUPERFAMILY SSF47203 258 423 3.38E-44 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 32 144 1.4E-25 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 150 162 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 Gene3D G3DSA:1.10.540.10 2 146 3.3E-42 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 Gene3D G3DSA:1.20.140.10 253 423 5.0E-51 T 11-10-2018 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 379 398 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 241 4.3E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 Gene3D G3DSA:1.20.140.10 424 595 4.9E-54 T 11-10-2018 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 SUPERFAMILY SSF56645 22 264 1.96E-69 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 416 1.9E-34 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_23190 49d791de07f96f7d3824f1d1a710b339 595 Gene3D G3DSA:2.40.110.10 147 251 4.2E-34 T 11-10-2018 UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 Gene3D G3DSA:3.40.50.1220 179 350 1.6E-45 T 11-10-2018 UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 320 1.3E-35 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 SUPERFAMILY SSF52518 1 179 1.09E-52 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 Gene3D G3DSA:3.40.50.970 1 177 1.0E-63 T 11-10-2018 UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 523 3.7E-40 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 Gene3D G3DSA:3.40.50.970 351 538 8.9E-56 T 11-10-2018 UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 SUPERFAMILY SSF52467 177 360 1.94E-41 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 SUPERFAMILY SSF52518 354 540 9.83E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 168 2.9E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 UP17_09430 a2a49889bae52c9338dc1b98b15f2fd0 544 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 414 433 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 Gene3D G3DSA:2.40.340.10 338 406 2.6E-115 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 Gene3D G3DSA:2.170.190.11 50 150 2.6E-115 T 11-10-2018 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 176 4.3E-39 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 Gene3D G3DSA:3.90.105.10 26 183 2.6E-115 T 11-10-2018 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 Gene3D G3DSA:3.40.980.10 184 337 2.6E-115 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 SUPERFAMILY SSF53218 186 329 7.46E-39 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 SUPERFAMILY SSF63882 8 185 6.15E-50 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 SUPERFAMILY SSF63867 339 413 7.06E-13 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 Pfam PF03454 MoeA C-terminal region (domain IV) 341 411 4.6E-13 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 3.7E-31 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 SMART SM00852 189 327 1.3E-38 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_02725 464d66c6134582bc3ac2ff1e5881c566 421 Pfam PF00994 Probable molybdopterin binding domain 191 326 7.3E-25 T 11-10-2018 IPR001453 MoaB/Mog domain UP17_00175 0b3faf47e12020c4b8a9a5006e4ad98f 484 Gene3D G3DSA:3.90.1150.150 282 373 6.8E-112 T 11-10-2018 UP17_00175 0b3faf47e12020c4b8a9a5006e4ad98f 484 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 404 466 6.1E-11 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 UP17_00175 0b3faf47e12020c4b8a9a5006e4ad98f 484 Gene3D G3DSA:3.90.105.10 416 470 1.8E-18 T 11-10-2018 UP17_00175 0b3faf47e12020c4b8a9a5006e4ad98f 484 SUPERFAMILY SSF53383 6 357 8.29E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_00175 0b3faf47e12020c4b8a9a5006e4ad98f 484 SUPERFAMILY SSF55904 335 479 3.27E-20 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 UP17_00175 0b3faf47e12020c4b8a9a5006e4ad98f 484 Gene3D G3DSA:3.40.640.10 48 278 6.8E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_00175 0b3faf47e12020c4b8a9a5006e4ad98f 484 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 304 2.6E-75 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 PRINTS PR00173 Glutamate-aspartate symporter signature 368 387 6.7E-17 T 11-10-2018 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 6.7E-17 T 11-10-2018 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 6.7E-17 T 11-10-2018 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 PRINTS PR00173 Glutamate-aspartate symporter signature 262 281 6.7E-17 T 11-10-2018 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 PRINTS PR00173 Glutamate-aspartate symporter signature 395 415 6.7E-17 T 11-10-2018 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 6.7E-17 T 11-10-2018 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 Gene3D G3DSA:1.10.3860.10 17 458 1.5E-102 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 SUPERFAMILY SSF118215 29 440 2.22E-91 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_19285 e06e14ef404e88adeb3a6eae37ae07cf 462 Pfam PF00375 Sodium:dicarboxylate symporter family 30 440 7.1E-98 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 Hamap MF_01974 Methionine aminopeptidase [map]. 1 246 32.958 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 SUPERFAMILY SSF55920 3 245 1.7E-66 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 Gene3D G3DSA:3.90.230.10 1 246 2.0E-83 T 11-10-2018 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 Pfam PF00557 Metallopeptidase family M24 12 238 5.0E-43 T 11-10-2018 IPR000994 Peptidase M24 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 6.8E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_21310 9d80270f0eeacea26940dfe18fe63ca1 246 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 245 1.8E-83 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 UP17_16685 358a5ceb80102e0ba915734f2726df43 125 Gene3D G3DSA:1.10.3830.10 4 124 8.4E-40 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 UP17_16685 358a5ceb80102e0ba915734f2726df43 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 19 119 2.5E-35 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 UP17_16685 358a5ceb80102e0ba915734f2726df43 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 72 83 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 UP17_08305 d7eda2885bf5d52b7c8e5da4de377e5b 393 SUPERFAMILY SSF51905 2 326 1.77E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_08305 d7eda2885bf5d52b7c8e5da4de377e5b 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.5E-8 T 11-10-2018 UP17_08305 d7eda2885bf5d52b7c8e5da4de377e5b 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.5E-8 T 11-10-2018 UP17_08305 d7eda2885bf5d52b7c8e5da4de377e5b 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.5E-8 T 11-10-2018 UP17_08305 d7eda2885bf5d52b7c8e5da4de377e5b 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 9.8E-43 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_08305 d7eda2885bf5d52b7c8e5da4de377e5b 393 Gene3D G3DSA:3.50.50.100 1 392 9.4E-115 T 11-10-2018 UP17_20775 d7eda2885bf5d52b7c8e5da4de377e5b 393 SUPERFAMILY SSF51905 2 326 1.77E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_20775 d7eda2885bf5d52b7c8e5da4de377e5b 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.5E-8 T 11-10-2018 UP17_20775 d7eda2885bf5d52b7c8e5da4de377e5b 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.5E-8 T 11-10-2018 UP17_20775 d7eda2885bf5d52b7c8e5da4de377e5b 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.5E-8 T 11-10-2018 UP17_20775 d7eda2885bf5d52b7c8e5da4de377e5b 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 9.8E-43 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_20775 d7eda2885bf5d52b7c8e5da4de377e5b 393 Gene3D G3DSA:3.50.50.100 1 392 9.4E-115 T 11-10-2018 UP17_02755 47d839aa42e40cd075e5cd29c6237b7f 388 Gene3D G3DSA:1.20.1250.20 4 190 1.6E-25 T 11-10-2018 UP17_02755 47d839aa42e40cd075e5cd29c6237b7f 388 ProSitePatterns PS00216 Sugar transport proteins signature 1. 259 274 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_02755 47d839aa42e40cd075e5cd29c6237b7f 388 Pfam PF07690 Major Facilitator Superfamily 10 229 4.7E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_02755 47d839aa42e40cd075e5cd29c6237b7f 388 Pfam PF05977 Transmembrane secretion effector 240 386 2.3E-6 T 11-10-2018 IPR010290 Transmembrane secretion effector UP17_02755 47d839aa42e40cd075e5cd29c6237b7f 388 Gene3D G3DSA:1.20.1250.20 221 387 1.9E-20 T 11-10-2018 UP17_02755 47d839aa42e40cd075e5cd29c6237b7f 388 SUPERFAMILY SSF103473 4 382 1.96E-50 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_16450 b5067964b1d488aea623b96a4ceda3e8 617 SUPERFAMILY SSF53649 244 615 8.34E-70 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 UP17_16450 b5067964b1d488aea623b96a4ceda3e8 617 Pfam PF00884 Sulfatase 246 534 5.9E-37 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 UP17_16450 b5067964b1d488aea623b96a4ceda3e8 617 Gene3D G3DSA:3.40.720.10 238 544 7.0E-79 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 UP17_16450 b5067964b1d488aea623b96a4ceda3e8 617 PIRSF PIRSF005091 1 617 6.0E-193 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like UP17_06345 ec763f0d1a9daded7d152d4eb22a068a 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 274 1.8E-125 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 UP17_06345 ec763f0d1a9daded7d152d4eb22a068a 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 270 4.5E-100 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 UP17_06345 ec763f0d1a9daded7d152d4eb22a068a 279 SUPERFAMILY SSF161098 20 267 3.08E-57 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06345 ec763f0d1a9daded7d152d4eb22a068a 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 6.3E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_06345 ec763f0d1a9daded7d152d4eb22a068a 279 Gene3D G3DSA:1.10.3720.10 19 273 2.1E-68 T 11-10-2018 IPR035906 MetI-like superfamily UP17_23500 328c2487559c27dffd7bcef662a8346c 202 Pfam PF00574 Clp protease 12 192 5.3E-87 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA UP17_23500 328c2487559c27dffd7bcef662a8346c 202 SUPERFAMILY SSF52096 3 191 8.71E-73 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_23500 328c2487559c27dffd7bcef662a8346c 202 Gene3D G3DSA:3.90.226.10 1 195 9.2E-84 T 11-10-2018 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.939 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site UP17_23500 328c2487559c27dffd7bcef662a8346c 202 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 1.4E-107 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 UP17_23500 328c2487559c27dffd7bcef662a8346c 202 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-10-2018 IPR018215 ClpP, Ser active site UP17_24200 e70a17588a2ee0b29d7257f98dd6a2e4 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_24200 e70a17588a2ee0b29d7257f98dd6a2e4 413 SUPERFAMILY SSF53383 2 411 1.31E-183 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_24200 e70a17588a2ee0b29d7257f98dd6a2e4 413 Gene3D G3DSA:3.90.1150.10 6 389 4.1E-188 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_24200 e70a17588a2ee0b29d7257f98dd6a2e4 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.575 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_24200 e70a17588a2ee0b29d7257f98dd6a2e4 413 Gene3D G3DSA:3.40.640.10 33 283 4.1E-188 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_24200 e70a17588a2ee0b29d7257f98dd6a2e4 413 Pfam PF00464 Serine hydroxymethyltransferase 4 380 5.3E-182 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_24200 e70a17588a2ee0b29d7257f98dd6a2e4 413 PIRSF PIRSF000412 1 413 1.4E-173 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 UP17_07225 3e2ad3d3b1c62eed2ffdb0101bdcbcde 401 Gene3D G3DSA:3.40.50.620 1 242 4.0E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_07225 3e2ad3d3b1c62eed2ffdb0101bdcbcde 401 SUPERFAMILY SSF52374 10 236 8.34E-18 T 11-10-2018 UP17_07225 3e2ad3d3b1c62eed2ffdb0101bdcbcde 401 Pfam PF05636 HIGH Nucleotidyl Transferase 1 382 4.9E-135 T 11-10-2018 IPR008513 Uncharacterised protein family UPF0348 UP17_07225 3e2ad3d3b1c62eed2ffdb0101bdcbcde 401 Hamap MF_01539 UPF0348 protein . 2 400 39.169 T 11-10-2018 IPR008513 Uncharacterised protein family UPF0348 UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 Gene3D G3DSA:1.10.287.950 143 276 2.6E-6 T 11-10-2018 UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 454 657 1.7E-57 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 367 386 1.8E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 205 230 1.8E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 395 421 2.9E-6 T 11-10-2018 IPR023908 xxxLxxG heptad repeat UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 Pfam PF12698 ABC-2 family transporter protein 24 165 4.0E-16 T 11-10-2018 UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 Pfam PF12698 ABC-2 family transporter protein 384 649 3.5E-8 T 11-10-2018 UP17_19565 bf65d2c94ef8ede5d268b1852d996de6 667 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 10 171 1.2E-63 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal UP17_25240 af69abf178233f163ddf872fbbd9124f 227 Pfam PF04474 Protein of unknown function (DUF554) 2 219 2.8E-64 T 11-10-2018 IPR007563 Protein of unknown function DUF554 UP17_04720 6f12a83c8e631533642dfe7dab4e93bf 264 Pfam PF00583 Acetyltransferase (GNAT) family 17 112 9.7E-6 T 11-10-2018 IPR000182 GNAT domain UP17_04720 6f12a83c8e631533642dfe7dab4e93bf 264 SUPERFAMILY SSF55729 10 115 6.86E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_04720 6f12a83c8e631533642dfe7dab4e93bf 264 Gene3D G3DSA:3.40.630.30 7 123 8.4E-9 T 11-10-2018 UP17_07395 61106c1504aa5c8458f7ac0fd76e4728 257 Gene3D G3DSA:3.30.70.330 80 166 1.5E-29 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily UP17_07395 61106c1504aa5c8458f7ac0fd76e4728 257 Gene3D G3DSA:3.10.290.10 176 231 4.3E-9 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_07395 61106c1504aa5c8458f7ac0fd76e4728 257 Gene3D G3DSA:3.30.1370.160 2 79 4.8E-30 T 11-10-2018 UP17_07395 61106c1504aa5c8458f7ac0fd76e4728 257 SUPERFAMILY SSF55174 35 251 3.79E-32 T 11-10-2018 UP17_07395 61106c1504aa5c8458f7ac0fd76e4728 257 SMART SM00363 181 238 3.3E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00185 9a7bca853e3761712a4979dcdeaced09 109 Gene3D G3DSA:3.30.70.120 1 103 6.8E-45 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_00185 9a7bca853e3761712a4979dcdeaced09 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 2.0E-53 T 11-10-2018 IPR010375 Cyclic-di-AMP receptor UP17_00185 9a7bca853e3761712a4979dcdeaced09 109 SUPERFAMILY SSF54913 1 107 5.56E-13 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta UP17_04405 f020b11d662a652a880835c388a5bd0d 379 SUPERFAMILY SSF48371 266 372 3.04E-11 T 11-10-2018 IPR016024 Armadillo-type fold UP17_04405 f020b11d662a652a880835c388a5bd0d 379 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 2.1E-16 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 UP17_04405 f020b11d662a652a880835c388a5bd0d 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_04405 f020b11d662a652a880835c388a5bd0d 379 Pfam PF13484 4Fe-4S double cluster binding domain 187 250 1.2E-16 T 11-10-2018 UP17_04405 f020b11d662a652a880835c388a5bd0d 379 Pfam PF13646 HEAT repeats 300 372 1.7E-11 T 11-10-2018 UP17_04405 f020b11d662a652a880835c388a5bd0d 379 SUPERFAMILY SSF54862 164 272 6.28E-16 T 11-10-2018 UP17_04405 f020b11d662a652a880835c388a5bd0d 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 13 342 3.6E-128 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 UP17_04405 f020b11d662a652a880835c388a5bd0d 379 SMART SM00567 E-Z type HEAT repeats 330 359 6.5 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 UP17_04405 f020b11d662a652a880835c388a5bd0d 379 SMART SM00567 E-Z type HEAT repeats 298 327 2.2 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 UP17_04405 f020b11d662a652a880835c388a5bd0d 379 Gene3D G3DSA:1.25.10.10 265 375 4.7E-10 T 11-10-2018 IPR011989 Armadillo-like helical UP17_21670 7dee4cff58b15facf5882a47e12a9c6a 234 SUPERFAMILY SSF54593 4 116 9.54E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_21670 7dee4cff58b15facf5882a47e12a9c6a 234 Gene3D G3DSA:3.10.180.10 2 230 1.4E-57 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_03865 ab7e3fc09b81f2bf54c8e62aee9b7f86 429 Gene3D G3DSA:3.40.640.10 72 320 1.9E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_03865 ab7e3fc09b81f2bf54c8e62aee9b7f86 429 Gene3D G3DSA:3.90.1150.10 9 423 1.9E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_03865 ab7e3fc09b81f2bf54c8e62aee9b7f86 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 1.9E-167 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 UP17_03865 ab7e3fc09b81f2bf54c8e62aee9b7f86 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 92.846 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 UP17_03865 ab7e3fc09b81f2bf54c8e62aee9b7f86 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_03865 ab7e3fc09b81f2bf54c8e62aee9b7f86 429 SUPERFAMILY SSF53383 2 427 1.92E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_03865 ab7e3fc09b81f2bf54c8e62aee9b7f86 429 Pfam PF00202 Aminotransferase class-III 36 402 3.7E-69 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 Hamap MF_01511 GMP reductase [guaC]. 2 325 64.352 T 11-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 4 324 3.5E-202 T 11-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 311 2.1E-70 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 165 177 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 Gene3D G3DSA:3.20.20.70 1 327 1.7E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 SMART SM01240 3 327 3.3E-116 T 11-10-2018 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 SUPERFAMILY SSF51412 4 314 1.96E-92 T 11-10-2018 UP17_18720 f807e29b9a75cd4a4000e386a13dc53c 327 PIRSF PIRSF036500 1 326 1.8E-197 T 11-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 UP17_21700 01e93cd311b757cae2cc1d5e52edfb49 399 Gene3D G3DSA:1.20.1250.20 13 202 1.9E-29 T 11-10-2018 UP17_21700 01e93cd311b757cae2cc1d5e52edfb49 399 SUPERFAMILY SSF103473 5 389 2.75E-63 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_21700 01e93cd311b757cae2cc1d5e52edfb49 399 Gene3D G3DSA:1.20.1250.20 208 395 2.6E-20 T 11-10-2018 UP17_21700 01e93cd311b757cae2cc1d5e52edfb49 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_21700 01e93cd311b757cae2cc1d5e52edfb49 399 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_21700 01e93cd311b757cae2cc1d5e52edfb49 399 Pfam PF07690 Major Facilitator Superfamily 19 238 1.6E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_21700 01e93cd311b757cae2cc1d5e52edfb49 399 Pfam PF07690 Major Facilitator Superfamily 246 389 1.6E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_20260 59876a6000fc0c92145c6190780159ef 171 SUPERFAMILY SSF55729 2 150 1.66E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_20260 59876a6000fc0c92145c6190780159ef 171 Gene3D G3DSA:3.40.630.30 2 167 1.4E-36 T 11-10-2018 UP17_20260 59876a6000fc0c92145c6190780159ef 171 Pfam PF00583 Acetyltransferase (GNAT) family 43 140 9.2E-14 T 11-10-2018 IPR000182 GNAT domain UP17_22580 f59f7995fac5ddaf46a3d122e7499ce9 397 Gene3D G3DSA:3.40.50.300 3 230 2.8E-74 T 11-10-2018 UP17_22580 f59f7995fac5ddaf46a3d122e7499ce9 397 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 257 372 4.4E-27 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal UP17_22580 f59f7995fac5ddaf46a3d122e7499ce9 397 SMART SM00833 257 372 2.3E-52 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal UP17_22580 f59f7995fac5ddaf46a3d122e7499ce9 397 SUPERFAMILY SSF52540 3 301 1.95E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_22580 f59f7995fac5ddaf46a3d122e7499ce9 397 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 211 1.6E-57 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain UP17_15300 a52047a3d3b68263f6512202b96b6d96 119 Gene3D G3DSA:1.10.287.1080 3 118 2.8E-33 T 11-10-2018 UP17_15300 a52047a3d3b68263f6512202b96b6d96 119 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 26 105 1.1E-17 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core UP17_15300 a52047a3d3b68263f6512202b96b6d96 119 SUPERFAMILY SSF101386 3 105 1.26E-24 T 11-10-2018 UP17_15300 a52047a3d3b68263f6512202b96b6d96 119 PIRSF PIRSF029904 2 112 7.1E-52 T 11-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD UP17_04930 adf4278eef7d52f646a94199ae732ffd 258 Gene3D G3DSA:1.10.12.10 201 257 4.1E-27 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal UP17_04930 adf4278eef7d52f646a94199ae732ffd 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 257 3.6E-71 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_04930 adf4278eef7d52f646a94199ae732ffd 258 SUPERFAMILY SSF52096 5 257 3.69E-82 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_04930 adf4278eef7d52f646a94199ae732ffd 258 Gene3D G3DSA:3.90.226.10 2 200 1.7E-72 T 11-10-2018 UP17_21860 f266ea9caf6a9bf8423747372214082a 468 Pfam PF01522 Polysaccharide deacetylase 269 388 1.1E-35 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 UP17_21860 f266ea9caf6a9bf8423747372214082a 468 SUPERFAMILY SSF88713 263 453 1.87E-61 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_21860 f266ea9caf6a9bf8423747372214082a 468 Gene3D G3DSA:3.20.20.370 235 461 1.2E-71 T 11-10-2018 UP17_21860 f266ea9caf6a9bf8423747372214082a 468 Gene3D G3DSA:3.90.640.20 151 230 2.6E-8 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily UP17_02410 b961e0b7f2ba8ac40aad393026ada314 198 SUPERFAMILY SSF81452 17 196 4.84E-50 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02410 b961e0b7f2ba8ac40aad393026ada314 198 Gene3D G3DSA:1.20.120.80 13 198 2.4E-52 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02410 b961e0b7f2ba8ac40aad393026ada314 198 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 10 198 5.0E-80 T 11-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 UP17_02410 b961e0b7f2ba8ac40aad393026ada314 198 Pfam PF00510 Cytochrome c oxidase subunit III 21 196 5.2E-16 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_02020 9d4d729f09b5cab51597a32bd3985799 345 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 53 193 7.6E-53 T 11-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal UP17_02020 9d4d729f09b5cab51597a32bd3985799 345 SUPERFAMILY SSF159774 51 337 1.7E-96 T 11-10-2018 IPR023158 YerB-like superfamily UP17_02020 9d4d729f09b5cab51597a32bd3985799 345 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 224 330 1.1E-23 T 11-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain UP17_02020 9d4d729f09b5cab51597a32bd3985799 345 Gene3D G3DSA:3.50.90.10 38 341 2.9E-107 T 11-10-2018 IPR023158 YerB-like superfamily UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 SUPERFAMILY SSF51735 4 240 1.94E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 239 4.1E-43 T 11-10-2018 UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 4.9E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 4.9E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.9E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 4.9E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 4.9E-29 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_08135 cff1b424315fb1f1011f6b70b2b14819 241 Gene3D G3DSA:3.40.50.720 1 240 5.2E-61 T 11-10-2018 UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 Gene3D G3DSA:3.20.20.80 6 372 8.7E-160 T 11-10-2018 UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 SUPERFAMILY SSF51445 5 375 3.47E-100 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 Gene3D G3DSA:2.60.40.1180 397 483 4.4E-31 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 PIRSF PIRSF001021 1 487 9.0E-213 T 11-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 SUPERFAMILY SSF51011 395 482 3.74E-31 T 11-10-2018 UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 Pfam PF00128 Alpha amylase, catalytic domain 25 373 1.7E-32 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 Gene3D G3DSA:2.40.30.140 104 207 8.7E-160 T 11-10-2018 UP17_24840 a7e722b7da7b1f91fef1320ce31281e7 493 SMART SM00642 5 391 2.7E-59 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 Pfam PF02225 PA domain 437 518 3.7E-16 T 11-10-2018 IPR003137 PA domain UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 Gene3D G3DSA:2.60.40.4130 1210 1360 1.9E-9 T 11-10-2018 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 SUPERFAMILY SSF52025 435 499 2.22E-18 T 11-10-2018 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 592 608 1.8E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 217 236 1.8E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 PRINTS PR00723 Subtilisin serine protease family (S8) signature 274 287 1.8E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 Pfam PF00082 Subtilase family 217 643 5.6E-67 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 SUPERFAMILY SSF63446 1294 1355 1.31E-8 T 11-10-2018 IPR036439 Dockerin domain superfamily GO:0000272 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 Gene3D G3DSA:3.50.30.30 418 527 2.5E-31 T 11-10-2018 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 SUPERFAMILY SSF52743 202 653 2.62E-85 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 278 288 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 SUPERFAMILY SSF49384 1045 1149 2.21E-5 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 222 233 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 Pfam PF05922 Peptidase inhibitor I9 82 184 3.9E-6 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 593 603 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 Gene3D G3DSA:3.40.50.200 528 655 1.9E-35 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 Gene3D G3DSA:3.40.50.200 190 417 1.5E-54 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_10265 3357d813738f402a0f8cd0298a0a5ffe 1381 ProSitePatterns PS00018 EF-hand calcium-binding domain. 1297 1309 - T 11-10-2018 IPR018247 EF-Hand 1, calcium-binding site UP17_14485 fa41d007e14f7fa9f8ed645ced6634b5 645 Gene3D G3DSA:3.20.20.60 300 639 1.3E-52 T 11-10-2018 UP17_14485 fa41d007e14f7fa9f8ed645ced6634b5 645 Gene3D G3DSA:1.10.189.10 19 204 3.6E-10 T 11-10-2018 UP17_14485 fa41d007e14f7fa9f8ed645ced6634b5 645 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 309 626 5.5E-12 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 UP17_14485 fa41d007e14f7fa9f8ed645ced6634b5 645 SUPERFAMILY SSF51621 308 630 7.74E-26 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 UP17_14485 fa41d007e14f7fa9f8ed645ced6634b5 645 Gene3D G3DSA:3.50.30.10 47 195 3.6E-10 T 11-10-2018 UP17_20510 eb5815262148edbc5ce9eb9c20d28771 123 Gene3D G3DSA:3.40.50.150 1 73 7.2E-7 T 11-10-2018 UP17_12965 2bcce665681295deb358c21c19ff1157 238 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 4 237 39.918 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 UP17_12965 2bcce665681295deb358c21c19ff1157 238 Gene3D G3DSA:3.40.50.620 13 238 1.4E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_12965 2bcce665681295deb358c21c19ff1157 238 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 28 236 9.5E-89 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 UP17_12965 2bcce665681295deb358c21c19ff1157 238 SUPERFAMILY SSF52402 19 201 2.44E-49 T 11-10-2018 UP17_12965 2bcce665681295deb358c21c19ff1157 238 PIRSF PIRSF000857 6 238 6.9E-87 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 UP17_12965 2bcce665681295deb358c21c19ff1157 238 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 42 213 4.6E-48 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 UP17_12965 2bcce665681295deb358c21c19ff1157 238 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 47 235 1.6E-72 T 11-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 UP17_22740 53a85af545dbb7c0421622cafcf1df87 440 Pfam PF13520 Amino acid permease 10 420 1.2E-62 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_22740 53a85af545dbb7c0421622cafcf1df87 440 Gene3D G3DSA:1.20.1740.10 4 439 1.2E-95 T 11-10-2018 UP17_22740 53a85af545dbb7c0421622cafcf1df87 440 PIRSF PIRSF006060 1 439 1.2E-85 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_18875 c3557438f27ce65248b0a7e79789be84 106 Gene3D G3DSA:1.10.10.10 1 106 6.0E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18875 c3557438f27ce65248b0a7e79789be84 106 SUPERFAMILY SSF46785 3 93 9.75E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_18875 c3557438f27ce65248b0a7e79789be84 106 Pfam PF03551 Transcriptional regulator PadR-like family 14 86 4.5E-25 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_16190 2c5c52f538ea34f5ed94bfe78c34559c 341 SUPERFAMILY SSF102114 84 234 1.7E-5 T 11-10-2018 UP17_16190 2c5c52f538ea34f5ed94bfe78c34559c 341 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 4 341 7.4E-153 T 11-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 UP17_16190 2c5c52f538ea34f5ed94bfe78c34559c 341 Gene3D G3DSA:3.80.30.30 115 341 1.8E-90 T 11-10-2018 UP17_16190 2c5c52f538ea34f5ed94bfe78c34559c 341 Gene3D G3DSA:3.40.50.12110 2 114 1.0E-46 T 11-10-2018 UP17_04590 2c91445ca4f39c22138fe24fd2640395 292 Pfam PF03773 Predicted permease 7 285 4.9E-78 T 11-10-2018 IPR005524 Predicted permease DUF318 UP17_12260 0ef386ce9b486f7a1bd3dbf09e64eb45 391 Gene3D G3DSA:3.40.640.10 12 260 5.7E-70 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_12260 0ef386ce9b486f7a1bd3dbf09e64eb45 391 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 24 389 1.3E-109 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_12260 0ef386ce9b486f7a1bd3dbf09e64eb45 391 Gene3D G3DSA:3.90.1150.10 261 391 5.4E-39 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_12260 0ef386ce9b486f7a1bd3dbf09e64eb45 391 SUPERFAMILY SSF53383 29 390 2.55E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_12260 0ef386ce9b486f7a1bd3dbf09e64eb45 391 PIRSF PIRSF001434 2 391 1.0E-118 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_15635 bce7f63319eeef2a0e93ff1354ef99a2 176 Pfam PF00578 AhpC/TSA family 41 155 1.2E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 UP17_15635 bce7f63319eeef2a0e93ff1354ef99a2 176 Gene3D G3DSA:3.40.30.10 31 176 2.9E-45 T 11-10-2018 UP17_15635 bce7f63319eeef2a0e93ff1354ef99a2 176 SUPERFAMILY SSF52833 11 173 5.74E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_15965 7457371267d8e15caa6a37a02fa6bdca 269 SUPERFAMILY SSF53850 5 265 5.44E-68 T 11-10-2018 UP17_15965 7457371267d8e15caa6a37a02fa6bdca 269 Gene3D G3DSA:3.40.190.10 131 225 1.6E-66 T 11-10-2018 UP17_15965 7457371267d8e15caa6a37a02fa6bdca 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 264 1.5E-59 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_15965 7457371267d8e15caa6a37a02fa6bdca 269 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site UP17_15965 7457371267d8e15caa6a37a02fa6bdca 269 SMART SM00079 41 265 9.9E-5 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 UP17_15965 7457371267d8e15caa6a37a02fa6bdca 269 Gene3D G3DSA:3.40.190.10 40 258 1.6E-66 T 11-10-2018 UP17_15965 7457371267d8e15caa6a37a02fa6bdca 269 SMART SM00062 41 266 4.5E-69 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_00195 f981feb80fe4a5ddfeb3ddacfc042a72 332 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 229 329 2.8E-5 T 11-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_00195 f981feb80fe4a5ddfeb3ddacfc042a72 332 Pfam PF13177 DNA polymerase III, delta subunit 12 172 4.2E-58 T 11-10-2018 UP17_00195 f981feb80fe4a5ddfeb3ddacfc042a72 332 SUPERFAMILY SSF52540 12 199 3.31E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00195 f981feb80fe4a5ddfeb3ddacfc042a72 332 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 18 199 1.4E-64 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 UP17_00195 f981feb80fe4a5ddfeb3ddacfc042a72 332 Gene3D G3DSA:3.40.50.300 7 171 1.1E-54 T 11-10-2018 UP17_16745 673c982e7c2e41531a6f79274e224cbe 223 SUPERFAMILY SSF51569 3 217 2.09E-84 T 11-10-2018 UP17_16745 673c982e7c2e41531a6f79274e224cbe 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 218 37.616 T 11-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 UP17_16745 673c982e7c2e41531a6f79274e224cbe 223 SMART SM01133 4 216 3.2E-101 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 UP17_16745 673c982e7c2e41531a6f79274e224cbe 223 Gene3D G3DSA:3.20.20.70 1 221 1.1E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_16745 673c982e7c2e41531a6f79274e224cbe 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 214 1.5E-92 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 UP17_16745 673c982e7c2e41531a6f79274e224cbe 223 Pfam PF01791 DeoC/LacD family aldolase 8 213 8.8E-18 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 UP17_16745 673c982e7c2e41531a6f79274e224cbe 223 PIRSF PIRSF001357 1 222 1.7E-76 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 UP17_20790 86322a1daacffdb6c4c8dcd2bc3f241f 181 Pfam PF00072 Response regulator receiver domain 4 110 3.5E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20790 86322a1daacffdb6c4c8dcd2bc3f241f 181 SUPERFAMILY SSF52172 1 129 1.29E-27 T 11-10-2018 IPR011006 CheY-like superfamily UP17_20790 86322a1daacffdb6c4c8dcd2bc3f241f 181 SMART SM00448 2 113 7.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20790 86322a1daacffdb6c4c8dcd2bc3f241f 181 Gene3D G3DSA:3.40.50.12740 2 180 4.8E-42 T 11-10-2018 UP17_08800 d8cb0e4fcef632c86f3aee7cc3f7b4aa 175 Gene3D G3DSA:1.10.1740.10 6 100 1.5E-18 T 11-10-2018 UP17_08800 d8cb0e4fcef632c86f3aee7cc3f7b4aa 175 Pfam PF08281 Sigma-70, region 4 112 163 7.8E-15 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_08800 d8cb0e4fcef632c86f3aee7cc3f7b4aa 175 Pfam PF04542 Sigma-70 region 2 21 88 2.5E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_08800 d8cb0e4fcef632c86f3aee7cc3f7b4aa 175 SUPERFAMILY SSF88946 12 101 1.14E-19 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_08800 d8cb0e4fcef632c86f3aee7cc3f7b4aa 175 SUPERFAMILY SSF88659 109 170 4.67E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_08800 d8cb0e4fcef632c86f3aee7cc3f7b4aa 175 Gene3D G3DSA:1.10.10.10 109 169 1.9E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08800 d8cb0e4fcef632c86f3aee7cc3f7b4aa 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 166 4.3E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_23890 d2a0117bbb9f0eb58516c91e63d2aa59 308 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 11 308 45.03 T 11-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU UP17_23890 d2a0117bbb9f0eb58516c91e63d2aa59 308 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 84 227 3.5E-49 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_23890 d2a0117bbb9f0eb58516c91e63d2aa59 308 Gene3D G3DSA:1.10.260.150 49 308 3.6E-90 T 11-10-2018 UP17_23890 d2a0117bbb9f0eb58516c91e63d2aa59 308 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 85 226 5.0E-49 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 Pfam PF04434 SWIM zinc finger 51 89 4.8E-6 T 11-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 Pfam PF08455 Bacterial SNF2 helicase associated 241 614 9.1E-84 T 11-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 SMART SM00490 935 1017 5.1E-25 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 Gene3D G3DSA:1.20.120.850 845 1067 6.1E-83 T 11-10-2018 UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 Gene3D G3DSA:3.40.50.10810 622 824 2.0E-59 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 SUPERFAMILY SSF52540 825 1072 1.52E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 SMART SM00487 617 812 2.6E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 SUPERFAMILY SSF52540 606 823 9.26E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 Pfam PF00271 Helicase conserved C-terminal domain 906 1017 1.2E-22 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 Pfam PF00176 SNF2 family N-terminal domain 637 895 8.7E-55 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 UP17_19040 f8bdbf6e2086c8f5671d7cd501e23aba 1073 Gene3D G3DSA:3.40.50.300 830 1031 6.1E-83 T 11-10-2018 UP17_13770 cd9380cca8d221c1281bd3600950cc14 365 Pfam PF03022 Major royal jelly protein 80 340 5.6E-37 T 11-10-2018 IPR017996 Major royal jelly protein/protein yellow UP17_13770 cd9380cca8d221c1281bd3600950cc14 365 Gene3D G3DSA:2.120.10.30 10 359 8.6E-118 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like UP17_13770 cd9380cca8d221c1281bd3600950cc14 365 SUPERFAMILY SSF101898 21 328 3.92E-22 T 11-10-2018 UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 Pfam PF01782 RimM N-terminal domain 7 90 3.6E-19 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 Pfam PF05239 PRC-barrel domain 97 171 3.0E-13 T 11-10-2018 IPR027275 PRC-barrel domain UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 170 23.018 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 Gene3D G3DSA:2.40.30.60 5 93 4.6E-17 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 170 3.3E-50 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 Gene3D G3DSA:2.30.30.240 95 172 3.9E-21 T 11-10-2018 UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 SUPERFAMILY SSF50447 3 92 7.65E-20 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily UP17_07655 646cda9ec8bf3313f4aaa2e54540f365 172 SUPERFAMILY SSF50346 100 170 5.49E-20 T 11-10-2018 IPR011033 PRC-barrel-like superfamily UP17_15265 c737edcbf2c6150a66b6d19709ef7be4 278 Pfam PF02548 Ketopantoate hydroxymethyltransferase 6 258 2.2E-109 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 UP17_15265 c737edcbf2c6150a66b6d19709ef7be4 278 Gene3D G3DSA:3.20.20.60 4 274 4.0E-113 T 11-10-2018 UP17_15265 c737edcbf2c6150a66b6d19709ef7be4 278 PIRSF PIRSF000388 1 266 1.0E-108 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 UP17_15265 c737edcbf2c6150a66b6d19709ef7be4 278 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 42.134 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 UP17_15265 c737edcbf2c6150a66b6d19709ef7be4 278 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 1.2E-112 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 UP17_15265 c737edcbf2c6150a66b6d19709ef7be4 278 SUPERFAMILY SSF51621 6 263 1.26E-104 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 UP17_07730 84be05b3748f185ef7ccea64ea4b8229 435 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 434 1.7E-238 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 UP17_07730 84be05b3748f185ef7ccea64ea4b8229 435 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 UP17_07730 84be05b3748f185ef7ccea64ea4b8229 435 Pfam PF01134 Glucose inhibited division protein A 5 367 1.4E-115 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 UP17_07730 84be05b3748f185ef7ccea64ea4b8229 435 Gene3D G3DSA:3.50.50.60 3 178 2.8E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_07730 84be05b3748f185ef7ccea64ea4b8229 435 Gene3D G3DSA:3.50.50.60 290 435 4.5E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_07730 84be05b3748f185ef7ccea64ea4b8229 435 SUPERFAMILY SSF51905 2 366 1.4E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_07730 84be05b3748f185ef7ccea64ea4b8229 435 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 36.944 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 UP17_24465 be19cf1ccc88f699df679cd8e26eef51 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 5.0E-21 T 11-10-2018 UP17_24465 be19cf1ccc88f699df679cd8e26eef51 77 Pfam PF02597 ThiS family 4 77 6.9E-17 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 UP17_24465 be19cf1ccc88f699df679cd8e26eef51 77 Gene3D G3DSA:3.10.20.30 1 77 1.3E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily UP17_24465 be19cf1ccc88f699df679cd8e26eef51 77 SUPERFAMILY SSF54285 1 77 7.12E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp UP17_03360 2844c0645f771361ea8c91d622c4ad20 274 Hamap MF_01384 Urease accessory protein UreD [ureD]. 4 260 26.946 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 UP17_03360 2844c0645f771361ea8c91d622c4ad20 274 Pfam PF01774 UreD urease accessory protein 47 249 5.1E-50 T 11-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 UP17_16910 aaf8082648a9a84e3c22be895c56f7d8 88 Pfam PF14143 YrhC-like protein 12 81 2.1E-21 T 11-10-2018 IPR025418 YrhC-like protein UP17_16910 aaf8082648a9a84e3c22be895c56f7d8 88 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 12 82 1.0E-6 T 11-10-2018 IPR025418 YrhC-like protein UP17_05825 b67068822f340097ec0d83e45ef781e1 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 3.0E-20 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 UP17_05825 b67068822f340097ec0d83e45ef781e1 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 215 1.3E-61 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_05825 b67068822f340097ec0d83e45ef781e1 280 Gene3D G3DSA:3.30.70.120 191 267 1.7E-21 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_05825 b67068822f340097ec0d83e45ef781e1 280 PIRSF PIRSF006483 1 280 5.8E-96 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_00330 378f35c03b274e95155a5c8ba00db071 539 PIRSF PIRSF038958 7 528 9.3E-79 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type UP17_00330 378f35c03b274e95155a5c8ba00db071 539 Pfam PF01943 Polysaccharide biosynthesis protein 13 311 3.1E-42 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 UP17_00330 378f35c03b274e95155a5c8ba00db071 539 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 364 510 6.3E-21 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain UP17_04175 df439107bc80aab550b9602daccf6cd4 284 SUPERFAMILY SSF63825 44 244 9.16E-11 T 11-10-2018 UP17_04175 df439107bc80aab550b9602daccf6cd4 284 Pfam PF16261 Domain of unknown function (DUF4915) 66 283 7.6E-16 T 11-10-2018 IPR017481 Conserved hypothetical protein CHP03032 UP17_20295 38ad47be50a40b6f918d89c564f6c628 585 Pfam PF00916 Sulfate permease family 15 379 4.0E-91 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 UP17_20295 38ad47be50a40b6f918d89c564f6c628 585 Gene3D G3DSA:3.30.750.24 422 545 1.3E-28 T 11-10-2018 IPR036513 STAS domain superfamily UP17_20295 38ad47be50a40b6f918d89c564f6c628 585 Pfam PF01740 STAS domain 437 537 7.2E-23 T 11-10-2018 IPR002645 STAS domain UP17_20295 38ad47be50a40b6f918d89c564f6c628 585 TIGRFAM TIGR00815 sulP: sulfate permease 7 537 7.1E-117 T 11-10-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 UP17_20295 38ad47be50a40b6f918d89c564f6c628 585 SUPERFAMILY SSF52091 436 540 1.59E-21 T 11-10-2018 IPR036513 STAS domain superfamily UP17_15415 c10cc87fd54dfca8cebc2e8703d5a374 82 Gene3D G3DSA:2.60.40.50 1 77 3.2E-40 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily UP17_15415 c10cc87fd54dfca8cebc2e8703d5a374 82 Pfam PF02081 Tryptophan RNA-binding attenuator protein 8 74 1.8E-38 T 11-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain UP17_15415 c10cc87fd54dfca8cebc2e8703d5a374 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 10 27 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 UP17_15415 c10cc87fd54dfca8cebc2e8703d5a374 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 59 75 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 UP17_15415 c10cc87fd54dfca8cebc2e8703d5a374 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 43 59 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 UP17_15415 c10cc87fd54dfca8cebc2e8703d5a374 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 27 43 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 UP17_15415 c10cc87fd54dfca8cebc2e8703d5a374 82 SUPERFAMILY SSF51219 8 75 4.71E-33 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily UP17_02195 6119867cdeab516f2830ceaf81f305ba 173 Pfam PF04073 Aminoacyl-tRNA editing domain 26 140 5.7E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 UP17_02195 6119867cdeab516f2830ceaf81f305ba 173 SUPERFAMILY SSF55826 5 153 6.02E-35 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 UP17_02195 6119867cdeab516f2830ceaf81f305ba 173 Gene3D G3DSA:3.90.960.10 3 159 8.1E-38 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 UP17_09410 2c4ad75c78418f503027ee7c9332df4f 135 SUPERFAMILY SSF49764 34 134 4.19E-11 T 11-10-2018 IPR008978 HSP20-like chaperone UP17_09410 2c4ad75c78418f503027ee7c9332df4f 135 Gene3D G3DSA:2.60.40.790 33 123 2.8E-12 T 11-10-2018 IPR008978 HSP20-like chaperone UP17_09410 2c4ad75c78418f503027ee7c9332df4f 135 Pfam PF00011 Hsp20/alpha crystallin family 40 134 2.7E-4 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain UP17_18130 67e3bfe2eedd002b26044579048cbbc4 310 SUPERFAMILY SSF117892 72 212 1.05E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily UP17_18130 67e3bfe2eedd002b26044579048cbbc4 310 Gene3D G3DSA:3.30.479.30 69 208 6.3E-23 T 11-10-2018 UP17_18130 67e3bfe2eedd002b26044579048cbbc4 310 Pfam PF01145 SPFH domain / Band 7 family 44 224 3.3E-28 T 11-10-2018 IPR001107 Band 7 domain UP17_18130 67e3bfe2eedd002b26044579048cbbc4 310 SMART SM00244 40 207 4.4E-21 T 11-10-2018 IPR001107 Band 7 domain UP17_18130 67e3bfe2eedd002b26044579048cbbc4 310 PIRSF PIRSF005651 18 310 2.9E-95 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 UP17_18130 67e3bfe2eedd002b26044579048cbbc4 310 TIGRFAM TIGR01932 hflC: HflC protein 26 301 2.2E-59 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 UP17_02770 90043363cabd203aa4861c3ae1e557a7 375 Pfam PF04055 Radical SAM superfamily 39 177 2.2E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_02770 90043363cabd203aa4861c3ae1e557a7 375 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 11 372 4.5E-193 T 11-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB UP17_02770 90043363cabd203aa4861c3ae1e557a7 375 Gene3D G3DSA:3.20.20.70 28 297 9.8E-23 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_02770 90043363cabd203aa4861c3ae1e557a7 375 Pfam PF08756 YfkB-like domain 223 372 5.2E-74 T 11-10-2018 IPR014866 YfkB-like domain UP17_02770 90043363cabd203aa4861c3ae1e557a7 375 SUPERFAMILY SSF102114 36 340 7.32E-30 T 11-10-2018 UP17_02770 90043363cabd203aa4861c3ae1e557a7 375 Pfam PF13353 4Fe-4S single cluster domain 43 137 5.3E-7 T 11-10-2018 UP17_06505 23d1f1e7a46a40c1df7a049851f6d54a 308 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_06505 23d1f1e7a46a40c1df7a049851f6d54a 308 Pfam PF00005 ABC transporter 31 181 1.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_06505 23d1f1e7a46a40c1df7a049851f6d54a 308 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 270 6.0E-7 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_06505 23d1f1e7a46a40c1df7a049851f6d54a 308 Gene3D G3DSA:3.40.50.300 1 306 1.1E-87 T 11-10-2018 UP17_06505 23d1f1e7a46a40c1df7a049851f6d54a 308 SMART SM00382 39 239 2.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_06505 23d1f1e7a46a40c1df7a049851f6d54a 308 SUPERFAMILY SSF52540 3 253 1.17E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_07215 1e2b50312129c7304f0749fabd5ea125 341 Pfam PF13180 PDZ domain 128 194 8.1E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_07215 1e2b50312129c7304f0749fabd5ea125 341 SUPERFAMILY SSF50156 129 211 3.94E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_07215 1e2b50312129c7304f0749fabd5ea125 341 SUPERFAMILY SSF54211 228 333 2.28E-20 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_07215 1e2b50312129c7304f0749fabd5ea125 341 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 232 331 2.7E-9 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 UP17_07215 1e2b50312129c7304f0749fabd5ea125 341 Gene3D G3DSA:3.30.230.10 202 341 3.3E-17 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_07215 1e2b50312129c7304f0749fabd5ea125 341 Gene3D G3DSA:2.30.42.10 129 201 3.5E-23 T 11-10-2018 UP17_07215 1e2b50312129c7304f0749fabd5ea125 341 SMART SM00228 108 186 4.4E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_15735 de2a4b457fd2a73884847700e08937bb 429 Pfam PF00860 Permease family 17 389 3.6E-60 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 UP17_15735 de2a4b457fd2a73884847700e08937bb 429 PIRSF PIRSF005353 1 428 2.7E-167 T 11-10-2018 IPR026033 Purine permease PbuG-like UP17_19475 e64f52a35cf0868e42476b1d0dfb2f6c 232 SUPERFAMILY SSF88713 30 230 1.16E-50 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_19475 e64f52a35cf0868e42476b1d0dfb2f6c 232 Pfam PF01522 Polysaccharide deacetylase 42 146 3.7E-31 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 UP17_19475 e64f52a35cf0868e42476b1d0dfb2f6c 232 Gene3D G3DSA:3.20.20.370 25 232 1.3E-55 T 11-10-2018 UP17_13070 8ce5c58db84dd1a0c01e969423e7398e 362 Pfam PF01063 Amino-transferase class IV 70 312 9.1E-34 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 UP17_13070 8ce5c58db84dd1a0c01e969423e7398e 362 PIRSF PIRSF006468 1 358 2.1E-137 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 UP17_13070 8ce5c58db84dd1a0c01e969423e7398e 362 Gene3D G3DSA:3.20.10.10 171 339 8.3E-136 T 11-10-2018 UP17_13070 8ce5c58db84dd1a0c01e969423e7398e 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 1.7E-121 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 UP17_13070 8ce5c58db84dd1a0c01e969423e7398e 362 SUPERFAMILY SSF56752 11 353 1.22E-113 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 UP17_13070 8ce5c58db84dd1a0c01e969423e7398e 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 UP17_13070 8ce5c58db84dd1a0c01e969423e7398e 362 Gene3D G3DSA:3.30.470.10 25 352 8.3E-136 T 11-10-2018 UP17_01590 80aa24b74c76bcfc0e39310dedb785b4 145 SUPERFAMILY SSF54593 1 142 9.8E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_01590 80aa24b74c76bcfc0e39310dedb785b4 145 Gene3D G3DSA:3.10.180.10 1 145 7.9E-55 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_01590 80aa24b74c76bcfc0e39310dedb785b4 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 140 1.4E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_08260 0d4a24ed59fb2f2faf00e616fec0ae65 121 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 59 113 4.6E-6 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D UP17_09565 79cb550388279759c415cffe71a8afee 131 SUPERFAMILY SSF75169 3 131 1.11E-22 T 11-10-2018 IPR027396 DsrEFH-like UP17_09565 79cb550388279759c415cffe71a8afee 131 Pfam PF13686 DsrE/DsrF/DrsH-like family 2 54 7.0E-13 T 11-10-2018 IPR032836 DsrE2-like family UP17_09565 79cb550388279759c415cffe71a8afee 131 Pfam PF13686 DsrE/DsrF/DrsH-like family 65 129 7.9E-22 T 11-10-2018 IPR032836 DsrE2-like family UP17_09565 79cb550388279759c415cffe71a8afee 131 Gene3D G3DSA:3.40.1260.10 1 131 1.9E-35 T 11-10-2018 IPR027396 DsrEFH-like UP17_15370 c53edb164548dd3ef425d27898a95df8 370 SUPERFAMILY SSF53383 1 361 9.87E-76 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_15370 c53edb164548dd3ef425d27898a95df8 370 Gene3D G3DSA:3.90.1150.10 33 352 1.9E-109 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_15370 c53edb164548dd3ef425d27898a95df8 370 Gene3D G3DSA:3.40.640.10 54 266 1.9E-109 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_15370 c53edb164548dd3ef425d27898a95df8 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 357 3.1E-107 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 UP17_15370 c53edb164548dd3ef425d27898a95df8 370 Pfam PF00155 Aminotransferase class I and II 30 355 1.2E-52 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_15370 c53edb164548dd3ef425d27898a95df8 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 359 57.891 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 UP17_01730 1af217a439a6fc5abce127bea268c3ee 367 PIRSF PIRSF006060 263 364 79.0 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_01730 1af217a439a6fc5abce127bea268c3ee 367 PIRSF PIRSF006060 1 310 4.6E-15 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_01730 1af217a439a6fc5abce127bea268c3ee 367 Gene3D G3DSA:1.20.1740.10 5 366 9.2E-19 T 11-10-2018 UP17_01730 1af217a439a6fc5abce127bea268c3ee 367 Pfam PF03845 Spore germination protein 8 330 4.9E-112 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_01730 1af217a439a6fc5abce127bea268c3ee 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 361 5.8E-89 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_10540 4965166b62e9f5d6326fda65e76652dc 70 SUPERFAMILY SSF48498 2 70 1.13E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_10540 4965166b62e9f5d6326fda65e76652dc 70 Gene3D G3DSA:1.10.357.10 1 70 1.3E-9 T 11-10-2018 UP17_02760 2e0f8250d5b106b810eeabefb943cc9a 352 Pfam PF01699 Sodium/calcium exchanger protein 207 344 1.5E-20 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 UP17_02760 2e0f8250d5b106b810eeabefb943cc9a 352 Pfam PF01699 Sodium/calcium exchanger protein 27 179 2.6E-19 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 UP17_02760 2e0f8250d5b106b810eeabefb943cc9a 352 Gene3D G3DSA:1.20.58.1130 35 239 2.7E-24 T 11-10-2018 UP17_02760 2e0f8250d5b106b810eeabefb943cc9a 352 Gene3D G3DSA:1.20.1420.30 58 342 2.7E-24 T 11-10-2018 UP17_02760 2e0f8250d5b106b810eeabefb943cc9a 352 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 9 349 1.6E-116 T 11-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_02760 2e0f8250d5b106b810eeabefb943cc9a 352 TIGRFAM TIGR00378 cax: calcium/proton exchanger 12 350 1.4E-146 T 11-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 UP17_07065 188ed6cdff1ca2baf12ae47e8a8b6c17 102 Pfam PF14036 YlaH-like protein 18 93 2.4E-31 T 11-10-2018 IPR025620 YlaH-like protein UP17_23180 3f09f4c951674d1d4e9e85d43993dc1d 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 125 2.8E-55 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 UP17_23180 3f09f4c951674d1d4e9e85d43993dc1d 127 SUPERFAMILY SSF51230 4 126 2.49E-46 T 11-10-2018 IPR011053 Single hybrid motif UP17_23180 3f09f4c951674d1d4e9e85d43993dc1d 127 Gene3D G3DSA:2.40.50.100 1 126 1.0E-52 T 11-10-2018 UP17_23180 3f09f4c951674d1d4e9e85d43993dc1d 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 UP17_23180 3f09f4c951674d1d4e9e85d43993dc1d 127 Pfam PF01597 Glycine cleavage H-protein 8 125 1.6E-49 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate UP17_23180 3f09f4c951674d1d4e9e85d43993dc1d 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 40.717 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 UP17_04165 d49783b6f1716965e2ee8ea5d57fcb35 189 Gene3D G3DSA:2.30.30.1210 42 188 1.8E-68 T 11-10-2018 UP17_04165 d49783b6f1716965e2ee8ea5d57fcb35 189 Pfam PF07563 Protein of unknown function (DUF1541) 67 118 8.3E-26 T 11-10-2018 IPR011438 Domain of unknown function DUF1541 UP17_04165 d49783b6f1716965e2ee8ea5d57fcb35 189 Pfam PF07563 Protein of unknown function (DUF1541) 131 182 2.9E-27 T 11-10-2018 IPR011438 Domain of unknown function DUF1541 UP17_02580 6654c04a5ecd9fac46a4754911411079 213 Gene3D G3DSA:3.40.109.10 1 185 3.4E-57 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_02580 6654c04a5ecd9fac46a4754911411079 213 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 2 204 1.9E-74 T 11-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 UP17_02580 6654c04a5ecd9fac46a4754911411079 213 SUPERFAMILY SSF55469 10 211 3.8E-53 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_02580 6654c04a5ecd9fac46a4754911411079 213 Pfam PF00881 Nitroreductase family 14 180 2.5E-31 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_05125 51fa6ea40ed9fafc0eeaca8bfc82913e 139 Gene3D G3DSA:1.10.10.10 1 139 7.3E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_05125 51fa6ea40ed9fafc0eeaca8bfc82913e 139 SUPERFAMILY SSF46785 4 138 1.73E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_05125 51fa6ea40ed9fafc0eeaca8bfc82913e 139 SMART SM00347 24 123 3.9E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 Gene3D G3DSA:1.10.10.2830 109 223 1.4E-36 T 11-10-2018 UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 Pfam PF02195 ParB-like nuclease domain 33 121 1.3E-24 T 11-10-2018 IPR003115 ParB/Sulfiredoxin UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 SUPERFAMILY SSF109709 116 221 1.23E-33 T 11-10-2018 UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 SUPERFAMILY SSF110849 32 124 4.97E-27 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 30 283 2.3E-109 T 11-10-2018 IPR023705 Nucleoid occlusion protein UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 283 36.769 T 11-10-2018 IPR023705 Nucleoid occlusion protein UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 29 207 1.7E-58 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 Gene3D G3DSA:3.90.1530.30 45 108 1.6E-22 T 11-10-2018 UP17_25010 004652e6787b70a9ea5fd9300802f5e4 286 SMART SM00470 32 122 5.4E-34 T 11-10-2018 IPR003115 ParB/Sulfiredoxin UP17_21375 b9d8cfbdf78417b067a1cd72ed676252 70 Gene3D G3DSA:1.10.260.40 1 65 5.1E-28 T 11-10-2018 UP17_21375 b9d8cfbdf78417b067a1cd72ed676252 70 Pfam PF01381 Helix-turn-helix 6 59 4.8E-18 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_21375 b9d8cfbdf78417b067a1cd72ed676252 70 SUPERFAMILY SSF47413 2 64 3.49E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_21375 b9d8cfbdf78417b067a1cd72ed676252 70 SMART SM00530 4 59 4.7E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19360 62146a489a4f050633588a9f27f1cf6f 387 Pfam PF12832 MFS_1 like family 6 356 4.3E-53 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain UP17_19360 62146a489a4f050633588a9f27f1cf6f 387 SUPERFAMILY SSF103473 4 379 1.96E-42 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_19360 62146a489a4f050633588a9f27f1cf6f 387 Gene3D G3DSA:1.20.1250.20 184 379 1.3E-36 T 11-10-2018 UP17_19360 62146a489a4f050633588a9f27f1cf6f 387 Gene3D G3DSA:1.20.1250.20 2 181 3.0E-26 T 11-10-2018 UP17_13620 48400e6e96c0c1d2ccc6bd26008155ce 66 SUPERFAMILY SSF52172 1 59 1.57E-9 T 11-10-2018 IPR011006 CheY-like superfamily UP17_13620 48400e6e96c0c1d2ccc6bd26008155ce 66 Gene3D G3DSA:3.40.50.12740 1 63 9.8E-10 T 11-10-2018 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 PRINTS PR00125 ATP synthase delta subunit signature 6 25 2.6E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.6E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.6E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.6E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.6E-24 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 SUPERFAMILY SSF47928 3 105 1.7E-24 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 Gene3D G3DSA:1.10.520.20 5 97 1.7E-13 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 6.9E-48 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 19.18 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_24160 d2f3abcf1d216e52a666d8621bc8d451 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 2.5E-46 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 UP17_00530 80521527c6b63b31d194467347e5e422 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 150 3.3E-57 T 11-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 UP17_00530 80521527c6b63b31d194467347e5e422 153 Gene3D G3DSA:1.10.10.1240 2 72 2.4E-35 T 11-10-2018 UP17_00530 80521527c6b63b31d194467347e5e422 153 Gene3D G3DSA:1.10.1200.150 73 153 1.1E-30 T 11-10-2018 UP17_00530 80521527c6b63b31d194467347e5e422 153 PIRSF PIRSF010607 1 153 3.5E-64 T 11-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 UP17_12050 234aa59284c1b33c972c232506527cd6 468 Gene3D G3DSA:1.10.45.10 416 456 3.0E-12 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 UP17_12050 234aa59284c1b33c972c232506527cd6 468 Gene3D G3DSA:3.30.70.2740 333 415 5.2E-16 T 11-10-2018 UP17_12050 234aa59284c1b33c972c232506527cd6 468 Pfam PF02913 FAD linked oxidases, C-terminal domain 214 455 1.1E-69 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 UP17_12050 234aa59284c1b33c972c232506527cd6 468 SUPERFAMILY SSF55103 218 458 1.64E-68 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 UP17_12050 234aa59284c1b33c972c232506527cd6 468 Gene3D G3DSA:3.30.465.40 2 235 1.9E-71 T 11-10-2018 UP17_12050 234aa59284c1b33c972c232506527cd6 468 SUPERFAMILY SSF56176 4 215 1.73E-68 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_12050 234aa59284c1b33c972c232506527cd6 468 Pfam PF01565 FAD binding domain 39 178 9.5E-38 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UP17_19480 5bd18c5fbae85855ff45e8423051cef6 160 PIRSF PIRSF021320 1 149 1.7E-52 T 11-10-2018 IPR009326 Protein of unknown function DUF984 UP17_19480 5bd18c5fbae85855ff45e8423051cef6 160 Pfam PF04266 ASCH domain 27 146 3.1E-24 T 11-10-2018 IPR007374 ASCH domain UP17_19480 5bd18c5fbae85855ff45e8423051cef6 160 Gene3D G3DSA:3.10.400.10 1 158 8.4E-56 T 11-10-2018 UP17_19480 5bd18c5fbae85855ff45e8423051cef6 160 SUPERFAMILY SSF88697 3 147 3.73E-50 T 11-10-2018 IPR015947 PUA-like superfamily UP17_19480 5bd18c5fbae85855ff45e8423051cef6 160 SMART SM01022 27 147 4.0E-41 T 11-10-2018 IPR007374 ASCH domain UP17_23065 dc5592430f540365af4d3d5458bc6785 88 Pfam PF11256 Protein of unknown function (DUF3055) 7 86 7.9E-38 T 11-10-2018 IPR021415 Protein of unknown function DUF3055 UP17_19180 30d982d4cb204d9ca6f88225e38ed9fd 229 PIRSF PIRSF006171 2 229 1.4E-74 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 UP17_19180 30d982d4cb204d9ca6f88225e38ed9fd 229 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_19180 30d982d4cb204d9ca6f88225e38ed9fd 229 Gene3D G3DSA:3.40.50.12740 4 215 2.1E-29 T 11-10-2018 UP17_19180 30d982d4cb204d9ca6f88225e38ed9fd 229 SUPERFAMILY SSF52172 3 133 9.39E-29 T 11-10-2018 IPR011006 CheY-like superfamily UP17_19180 30d982d4cb204d9ca6f88225e38ed9fd 229 SMART SM00448 4 117 2.0E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_12435 ab713b8dc9dec48203cbf5eb415bddbd 453 Gene3D G3DSA:3.40.50.1100 119 241 3.4E-197 T 11-10-2018 UP17_12435 ab713b8dc9dec48203cbf5eb415bddbd 453 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 77 400 2.7E-54 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_12435 ab713b8dc9dec48203cbf5eb415bddbd 453 SUPERFAMILY SSF53686 53 441 1.29E-54 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_12435 ab713b8dc9dec48203cbf5eb415bddbd 453 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 111 125 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 UP17_12435 ab713b8dc9dec48203cbf5eb415bddbd 453 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 15 440 4.6E-219 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 UP17_12435 ab713b8dc9dec48203cbf5eb415bddbd 453 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 453 256.785 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 UP17_12435 ab713b8dc9dec48203cbf5eb415bddbd 453 Gene3D G3DSA:3.40.50.1100 27 440 3.4E-197 T 11-10-2018 UP17_10995 1b7a8c2f38965a1b017e2da5831ad1e0 288 Gene3D G3DSA:3.30.420.10 128 269 3.7E-9 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_10995 1b7a8c2f38965a1b017e2da5831ad1e0 288 Pfam PF00665 Integrase core domain 131 241 1.9E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_10995 1b7a8c2f38965a1b017e2da5831ad1e0 288 Pfam PF13276 HTH-like domain 54 106 4.4E-16 T 11-10-2018 IPR025948 HTH-like domain UP17_10995 1b7a8c2f38965a1b017e2da5831ad1e0 288 SUPERFAMILY SSF53098 121 283 2.73E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_15295 970fc9384483483b68c87c84f46ac42a 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 30.065 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 SUPERFAMILY SSF55347 129 237 2.11E-39 T 11-10-2018 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 SUPERFAMILY SSF51735 3 154 2.1E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_15295 970fc9384483483b68c87c84f46ac42a 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 128 1.2E-34 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 Gene3D G3DSA:3.40.50.720 5 263 1.7E-76 T 11-10-2018 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 PIRSF PIRSF000161 2 266 1.6E-71 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 265 2.7E-86 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 264 1.2E-32 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 Gene3D G3DSA:3.30.360.10 130 235 1.7E-76 T 11-10-2018 UP17_15295 970fc9384483483b68c87c84f46ac42a 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 UP17_00280 0a08caffe4c6a2a9690d0535a22f4b36 124 SUPERFAMILY SSF55298 2 123 2.67E-46 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_00280 0a08caffe4c6a2a9690d0535a22f4b36 124 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 UP17_00280 0a08caffe4c6a2a9690d0535a22f4b36 124 Pfam PF01042 Endoribonuclease L-PSP 7 122 3.3E-44 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 UP17_00280 0a08caffe4c6a2a9690d0535a22f4b36 124 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 7.7E-54 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 UP17_00280 0a08caffe4c6a2a9690d0535a22f4b36 124 Gene3D G3DSA:3.30.1330.40 1 124 8.7E-54 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_21660 bff148a7eaadbea3726551e115eb98b3 194 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 182 4.0E-50 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_21660 bff148a7eaadbea3726551e115eb98b3 194 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 19.858 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_21660 bff148a7eaadbea3726551e115eb98b3 194 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 191 1.7E-60 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_21660 bff148a7eaadbea3726551e115eb98b3 194 SMART SM01207 8 183 2.2E-74 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UP17_02530 1091df87de0fbb0a56b5a2804e15a938 186 Gene3D G3DSA:3.10.350.10 24 78 1.9E-21 T 11-10-2018 IPR036779 LysM domain superfamily UP17_02530 1091df87de0fbb0a56b5a2804e15a938 186 SUPERFAMILY SSF54106 27 70 6.15E-14 T 11-10-2018 UP17_02530 1091df87de0fbb0a56b5a2804e15a938 186 SMART SM00257 28 71 3.2E-18 T 11-10-2018 IPR018392 LysM domain UP17_02530 1091df87de0fbb0a56b5a2804e15a938 186 Pfam PF01476 LysM domain 29 70 4.6E-16 T 11-10-2018 IPR018392 LysM domain UP17_02530 1091df87de0fbb0a56b5a2804e15a938 186 Pfam PF06725 3D domain 126 184 6.9E-20 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 UP17_02530 1091df87de0fbb0a56b5a2804e15a938 186 SUPERFAMILY SSF50685 126 175 9.42E-8 T 11-10-2018 IPR036908 RlpA-like domain superfamily UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 SUPERFAMILY SSF51306 28 180 2.49E-48 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 Pfam PF00717 Peptidase S24-like 35 99 4.1E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 88 4.5E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 4.5E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 135 154 4.5E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 176 1.4E-49 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 ProSitePatterns PS00761 Signal peptidases I signature 3. 140 153 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 Gene3D G3DSA:2.10.109.10 55 181 2.5E-41 T 11-10-2018 UP17_04555 7f0cc904ed4e222ab3273fb2a8bb6685 182 ProSitePatterns PS00760 Signal peptidases I lysine active site. 78 90 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 UP17_10100 90b1647911d901a6f1e4382ec367c9b3 208 SUPERFAMILY SSF52218 1 208 3.55E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_10100 90b1647911d901a6f1e4382ec367c9b3 208 Pfam PF02525 Flavodoxin-like fold 3 203 9.1E-41 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_10100 90b1647911d901a6f1e4382ec367c9b3 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 28.473 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 UP17_10100 90b1647911d901a6f1e4382ec367c9b3 208 Gene3D G3DSA:3.40.50.360 1 208 2.7E-57 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_15560 64962a5a083b5e02459b2cc2d9a9ea8f 152 Pfam PF10864 Protein of unknown function (DUF2663) 19 150 6.6E-45 T 11-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane UP17_15560 64962a5a083b5e02459b2cc2d9a9ea8f 152 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 17 150 3.0E-12 T 11-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane UP17_15100 64fb2631a79d29f8136e56e08c462a4a 103 PIRSF PIRSF029938 1 103 9.8E-42 T 11-10-2018 IPR011229 Cell cycle protein GpsB UP17_15100 64fb2631a79d29f8136e56e08c462a4a 103 Pfam PF05103 DivIVA protein 8 67 4.2E-16 T 11-10-2018 IPR007793 DivIVA family UP17_15100 64fb2631a79d29f8136e56e08c462a4a 103 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 4.2E-16 T 11-10-2018 IPR019933 DivIVA domain UP17_15100 64fb2631a79d29f8136e56e08c462a4a 103 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 99 23.984 T 11-10-2018 IPR011229 Cell cycle protein GpsB UP17_11485 10d20d0f7170b63575d55cc7c8d24d1d 295 SUPERFAMILY SSF101898 11 253 3.4E-34 T 11-10-2018 UP17_11485 10d20d0f7170b63575d55cc7c8d24d1d 295 Gene3D G3DSA:2.130.10.10 2 295 6.6E-116 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 UP17_11485 10d20d0f7170b63575d55cc7c8d24d1d 295 Hamap MF_01282 Virginiamycin B lyase [vgb]. 7 294 40.895 T 11-10-2018 IPR011217 Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 UP17_11485 10d20d0f7170b63575d55cc7c8d24d1d 295 PIRSF PIRSF026412 3 295 2.8E-107 T 11-10-2018 IPR011217 Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 Gene3D G3DSA:1.10.3860.10 2 408 7.8E-84 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 Pfam PF00375 Sodium:dicarboxylate symporter family 14 403 2.4E-100 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 4.0E-20 T 11-10-2018 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 4.0E-20 T 11-10-2018 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 4.0E-20 T 11-10-2018 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 4.0E-20 T 11-10-2018 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 4.0E-20 T 11-10-2018 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 4.0E-20 T 11-10-2018 UP17_24765 efc97d56ceec47b0da834283c43b730b 422 SUPERFAMILY SSF118215 13 403 3.4E-86 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_22940 f586159452e6537138936e35ace8c968 249 Gene3D G3DSA:3.40.50.10990 62 220 2.7E-53 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 UP17_22940 f586159452e6537138936e35ace8c968 249 SUPERFAMILY SSF142695 75 219 3.53E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 UP17_22940 f586159452e6537138936e35ace8c968 249 Pfam PF00925 GTP cyclohydrolase II 75 216 2.6E-46 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 UP17_18390 4231def2f1aa63249955c90b044f32cc 68 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_18390 4231def2f1aa63249955c90b044f32cc 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_18390 4231def2f1aa63249955c90b044f32cc 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 2.7E-23 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 UP17_18390 4231def2f1aa63249955c90b044f32cc 68 Gene3D G3DSA:1.10.8.910 8 68 7.2E-32 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 PIRSF PIRSF005962 3 375 1.8E-107 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 SUPERFAMILY SSF55031 178 283 2.22E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 Pfam PF07687 Peptidase dimerisation domain 180 269 3.3E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 8 361 6.5E-87 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 Pfam PF01546 Peptidase family M20/M25/M40 67 369 2.0E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 Gene3D G3DSA:3.30.70.360 173 287 9.3E-117 T 11-10-2018 UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 Gene3D G3DSA:3.40.630.10 8 358 9.3E-117 T 11-10-2018 UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 SUPERFAMILY SSF53187 5 367 4.19E-64 T 11-10-2018 UP17_06920 46608d693dafb71256e1c3e9bcd7933e 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 3 372 62.028 T 11-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 UP17_03375 8d783bf7a08d5625a8fd01bbe6ea361d 834 SUPERFAMILY SSF52317 630 830 1.08E-11 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_03375 8d783bf7a08d5625a8fd01bbe6ea361d 834 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 394 459 8.2E-13 T 11-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain UP17_03375 8d783bf7a08d5625a8fd01bbe6ea361d 834 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 517 584 7.3E-6 T 11-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain UP17_03375 8d783bf7a08d5625a8fd01bbe6ea361d 834 Gene3D G3DSA:2.60.40.10 487 592 7.9E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_03375 8d783bf7a08d5625a8fd01bbe6ea361d 834 SUPERFAMILY SSF102588 51 254 7.98E-24 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_03375 8d783bf7a08d5625a8fd01bbe6ea361d 834 Pfam PF02585 GlcNAc-PI de-N-acetylase 51 181 7.9E-12 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 UP17_03375 8d783bf7a08d5625a8fd01bbe6ea361d 834 Gene3D G3DSA:3.40.50.10320 36 263 3.9E-32 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_22795 fc64b931bef85b938975a84e73ee8e6b 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 2.6E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UP17_22795 fc64b931bef85b938975a84e73ee8e6b 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 2.6E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UP17_22795 fc64b931bef85b938975a84e73ee8e6b 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 2.6E-11 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UP17_22795 fc64b931bef85b938975a84e73ee8e6b 447 Pfam PF00209 Sodium:neurotransmitter symporter family 147 444 7.4E-33 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UP17_22795 fc64b931bef85b938975a84e73ee8e6b 447 Pfam PF00209 Sodium:neurotransmitter symporter family 5 123 5.2E-26 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 UP17_22795 fc64b931bef85b938975a84e73ee8e6b 447 SUPERFAMILY SSF161070 5 444 3.01E-136 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 UP17_09200 56658f08acaa44fef999eabd6d2eb5a5 370 SUPERFAMILY SSF48371 41 237 1.1E-41 T 11-10-2018 IPR016024 Armadillo-type fold UP17_09200 56658f08acaa44fef999eabd6d2eb5a5 370 Gene3D G3DSA:1.25.40.290 119 237 1.3E-38 T 11-10-2018 UP17_09200 56658f08acaa44fef999eabd6d2eb5a5 370 Pfam PF08713 DNA alkylation repair enzyme 126 212 7.5E-6 T 11-10-2018 IPR014825 DNA alkylation repair enzyme UP17_11475 2813ac49f2b3c3273adc538547c0f8ed 207 Pfam PF01810 LysE type translocator 15 196 5.0E-24 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_18810 1e78abad5a5bc6109364df8ca4da060b 483 Pfam PF13751 Transposase DDE domain 355 478 9.9E-16 T 11-10-2018 IPR025668 Transposase DDE domain UP17_18810 1e78abad5a5bc6109364df8ca4da060b 483 Pfam PF05598 Transposase domain (DUF772) 52 123 1.4E-19 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_04985 27f0c550e7d428cf6d960c8e3d57691f 247 Gene3D G3DSA:3.60.21.10 1 246 3.5E-52 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_04985 27f0c550e7d428cf6d960c8e3d57691f 247 SUPERFAMILY SSF56300 1 237 6.96E-43 T 11-10-2018 UP17_04985 27f0c550e7d428cf6d960c8e3d57691f 247 PIRSF PIRSF000883 1 246 2.3E-43 T 11-10-2018 IPR011152 Phosphoesterase MJ0912 UP17_04985 27f0c550e7d428cf6d960c8e3d57691f 247 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 205 2.7E-26 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 SMART SM00382 296 490 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 SMART SM00382 38 230 1.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 Pfam PF00005 ABC transporter 287 441 1.2E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 Pfam PF00005 ABC transporter 29 182 3.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 ProSitePatterns PS00211 ABC transporters family signature. 414 428 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 SUPERFAMILY SSF52540 12 241 6.41E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 Gene3D G3DSA:3.40.50.300 258 510 2.2E-52 T 11-10-2018 UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 Gene3D G3DSA:3.40.50.300 4 251 2.2E-58 T 11-10-2018 UP17_13690 71400bb54d39593ff154007a2f4e5b70 516 SUPERFAMILY SSF52540 275 502 2.72E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12820 42550659bf947e7f77bdd891b0342e6d 284 Gene3D G3DSA:3.30.2010.10 87 173 1.1E-8 T 11-10-2018 UP17_12820 42550659bf947e7f77bdd891b0342e6d 284 Pfam PF05569 BlaR1 peptidase M56 61 246 1.2E-15 T 11-10-2018 IPR008756 Peptidase M56 UP17_00345 4a4854bcce5414ff6a59eee2a5f21865 102 Pfam PF07873 YabP family 19 84 3.3E-21 T 11-10-2018 IPR022476 Sporulation protein YabP/YqfC UP17_00345 4a4854bcce5414ff6a59eee2a5f21865 102 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 18 102 4.0E-36 T 11-10-2018 IPR012504 Sporulation protein YabP UP17_00345 4a4854bcce5414ff6a59eee2a5f21865 102 Gene3D G3DSA:2.60.40.2000 27 84 4.5E-24 T 11-10-2018 IPR038705 YabP superfamily UP17_00345 4a4854bcce5414ff6a59eee2a5f21865 102 PIRSF PIRSF011576 1 102 1.7E-52 T 11-10-2018 IPR012504 Sporulation protein YabP UP17_00345 4a4854bcce5414ff6a59eee2a5f21865 102 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 19 102 2.3E-33 T 11-10-2018 IPR012504 Sporulation protein YabP UP17_18585 9b7ba5843e174a7b5d42525bee5f8165 284 Pfam PF01063 Amino-transferase class IV 30 251 1.7E-47 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 UP17_18585 9b7ba5843e174a7b5d42525bee5f8165 284 Gene3D G3DSA:3.30.470.10 3 119 1.8E-34 T 11-10-2018 UP17_18585 9b7ba5843e174a7b5d42525bee5f8165 284 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 3 276 1.3E-118 T 11-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 UP17_18585 9b7ba5843e174a7b5d42525bee5f8165 284 Gene3D G3DSA:3.20.10.10 120 282 1.5E-58 T 11-10-2018 UP17_18585 9b7ba5843e174a7b5d42525bee5f8165 284 SUPERFAMILY SSF56752 2 274 2.49E-80 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 UP17_25830 7c67a60de216b8de7fe2c5cf72fe1abb 283 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 14 86 5.5E-12 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 UP17_25830 7c67a60de216b8de7fe2c5cf72fe1abb 283 Gene3D G3DSA:1.10.443.10 103 282 2.0E-38 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_25830 7c67a60de216b8de7fe2c5cf72fe1abb 283 Pfam PF00589 Phage integrase family 114 265 5.3E-28 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_25830 7c67a60de216b8de7fe2c5cf72fe1abb 283 SUPERFAMILY SSF56349 12 271 1.53E-43 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_25830 7c67a60de216b8de7fe2c5cf72fe1abb 283 Gene3D G3DSA:1.10.150.130 1 99 5.3E-20 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 219 6.3E-28 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 1.3E-42 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 SUPERFAMILY SSF56645 4 243 3.14E-88 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 1.7E-31 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 Gene3D G3DSA:1.10.540.10 1 120 4.1E-34 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 SUPERFAMILY SSF47203 229 379 5.48E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 Gene3D G3DSA:1.20.140.10 237 380 1.2E-44 T 11-10-2018 UP17_03740 f7633b4c74642b5e4fb52f8036649a4e 381 Gene3D G3DSA:2.40.110.10 121 236 8.4E-47 T 11-10-2018 UP17_18370 c52cc86ac287f35af71794fb61ba5a4a 275 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 246 38.301 T 11-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 UP17_18370 c52cc86ac287f35af71794fb61ba5a4a 275 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 26 244 1.0E-52 T 11-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 UP17_13765 ff424add33e5d1f6d599ca63eaba0e7d 167 Pfam PF15975 Flotillin 25 115 7.6E-15 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 UP17_01360 6ad375941fca84c58a7650eb04f1cb83 196 Pfam PF01694 Rhomboid family 54 195 1.9E-32 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 UP17_01360 6ad375941fca84c58a7650eb04f1cb83 196 Gene3D G3DSA:1.20.1540.10 9 196 5.8E-39 T 11-10-2018 IPR035952 Rhomboid-like superfamily UP17_01360 6ad375941fca84c58a7650eb04f1cb83 196 SUPERFAMILY SSF144091 15 195 4.84E-40 T 11-10-2018 UP17_03655 08adb21e7391d21610199c8e575a1fb5 183 Pfam PF08006 Protein of unknown function (DUF1700) 1 179 5.7E-52 T 11-10-2018 IPR012963 Protein of unknown function DUF1700 UP17_23615 7db1023dcc8d8b95ffada9da421de81b 366 Pfam PF13349 Putative adhesin 122 333 4.1E-18 T 11-10-2018 IPR025164 Putative adhesin UP17_23615 7db1023dcc8d8b95ffada9da421de81b 366 PIRSF PIRSF012569 1 366 1.9E-89 T 11-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 UP17_24070 85ae90e9a31a232ab39a7bf97bd90967 433 Gene3D G3DSA:3.65.10.10 6 415 2.1E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 UP17_24070 85ae90e9a31a232ab39a7bf97bd90967 433 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 6.7E-175 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_24070 85ae90e9a31a232ab39a7bf97bd90967 433 SUPERFAMILY SSF55205 2 418 1.7E-140 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 UP17_24070 85ae90e9a31a232ab39a7bf97bd90967 433 Gene3D G3DSA:3.65.10.10 20 231 2.1E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 UP17_24070 85ae90e9a31a232ab39a7bf97bd90967 433 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.082 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 UP17_24070 85ae90e9a31a232ab39a7bf97bd90967 433 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 407 4.9E-113 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 UP17_01800 a5698c930e241395092e70ba3820ceb4 401 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_01800 a5698c930e241395092e70ba3820ceb4 401 SMART SM00382 53 242 1.6E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_01800 a5698c930e241395092e70ba3820ceb4 401 Pfam PF00571 CBS domain 335 389 8.6E-8 T 11-10-2018 IPR000644 CBS domain UP17_01800 a5698c930e241395092e70ba3820ceb4 401 Pfam PF00571 CBS domain 279 329 2.3E-4 T 11-10-2018 IPR000644 CBS domain UP17_01800 a5698c930e241395092e70ba3820ceb4 401 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 392 3.6E-149 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 UP17_01800 a5698c930e241395092e70ba3820ceb4 401 SUPERFAMILY SSF52540 36 270 5.83E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01800 a5698c930e241395092e70ba3820ceb4 401 Gene3D G3DSA:3.40.50.300 5 269 1.4E-71 T 11-10-2018 UP17_01800 a5698c930e241395092e70ba3820ceb4 401 SUPERFAMILY SSF54631 274 390 4.17E-20 T 11-10-2018 UP17_01800 a5698c930e241395092e70ba3820ceb4 401 Gene3D G3DSA:3.10.580.10 278 390 5.0E-18 T 11-10-2018 UP17_01800 a5698c930e241395092e70ba3820ceb4 401 Pfam PF00005 ABC transporter 44 192 3.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_01800 a5698c930e241395092e70ba3820ceb4 401 SMART SM00116 282 330 1.2 T 11-10-2018 IPR000644 CBS domain UP17_01800 a5698c930e241395092e70ba3820ceb4 401 SMART SM00116 342 389 3.3 T 11-10-2018 IPR000644 CBS domain UP17_15590 a7ec4d95edfdca3ed9eb76f6de8ef6a2 193 Pfam PF12822 ECF transporter, substrate-specific component 7 176 2.1E-24 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 UP17_15590 a7ec4d95edfdca3ed9eb76f6de8ef6a2 193 PIRSF PIRSF037778 2 188 2.5E-43 T 11-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 UP17_15590 a7ec4d95edfdca3ed9eb76f6de8ef6a2 193 Gene3D G3DSA:1.10.1760.20 3 191 5.0E-49 T 11-10-2018 UP17_08125 631486f59f5c3e657a56225d9329fb96 426 SUPERFAMILY SSF63411 8 224 2.51E-22 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UP17_08125 631486f59f5c3e657a56225d9329fb96 426 Pfam PF05193 Peptidase M16 inactive domain 185 357 4.9E-28 T 11-10-2018 IPR007863 Peptidase M16, C-terminal UP17_08125 631486f59f5c3e657a56225d9329fb96 426 Gene3D G3DSA:3.30.830.10 240 425 1.6E-44 T 11-10-2018 UP17_08125 631486f59f5c3e657a56225d9329fb96 426 Gene3D G3DSA:3.30.830.10 5 230 3.3E-63 T 11-10-2018 UP17_08125 631486f59f5c3e657a56225d9329fb96 426 SUPERFAMILY SSF63411 248 413 6.33E-31 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 Gene3D G3DSA:3.40.50.300 1 244 3.4E-37 T 11-10-2018 UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 Pfam PF00005 ABC transporter 327 451 2.4E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 Pfam PF00005 ABC transporter 22 146 3.7E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 Gene3D G3DSA:3.40.50.300 271 492 2.5E-37 T 11-10-2018 UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 SMART SM00382 30 190 3.0E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 SMART SM00382 334 491 3.1 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 SUPERFAMILY SSF52540 299 492 3.02E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 SUPERFAMILY SSF52540 3 195 6.01E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_12520 188c5bc49ee7ab18e07bf55ebe33c737 492 ProSitePatterns PS00211 ABC transporters family signature. 423 437 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_18115 d5d50abdc62c2be41b858594f779df50 210 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 4 210 5.0E-71 T 11-10-2018 IPR014205 Sporulation protein YtaF UP17_18115 d5d50abdc62c2be41b858594f779df50 210 Pfam PF02659 Putative manganese efflux pump 125 207 1.5E-10 T 11-10-2018 IPR003810 Putative manganese efflux pump UP17_18115 d5d50abdc62c2be41b858594f779df50 210 Pfam PF02659 Putative manganese efflux pump 2 80 2.8E-10 T 11-10-2018 IPR003810 Putative manganese efflux pump UP17_14535 1320294a54057e4a1891bf4af63f274c 194 Pfam PF02525 Flavodoxin-like fold 1 187 1.3E-49 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_14535 1320294a54057e4a1891bf4af63f274c 194 SUPERFAMILY SSF52218 1 193 1.34E-56 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_14535 1320294a54057e4a1891bf4af63f274c 194 Gene3D G3DSA:3.40.50.360 1 194 1.3E-55 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_04120 4d65a48947a37f46059c80fc9b524927 210 Pfam PF07875 Coat F domain 122 184 4.3E-18 T 11-10-2018 IPR012851 Spore coat protein CotF-like UP17_11430 b5dbe806cb4be760a3a1d8b396c58aa1 126 SUPERFAMILY SSF46955 2 116 4.4E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_11430 b5dbe806cb4be760a3a1d8b396c58aa1 126 Pfam PF13411 MerR HTH family regulatory protein 2 66 7.9E-21 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_11430 b5dbe806cb4be760a3a1d8b396c58aa1 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 5.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_11430 b5dbe806cb4be760a3a1d8b396c58aa1 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 5.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_11430 b5dbe806cb4be760a3a1d8b396c58aa1 126 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 5.3E-6 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_11430 b5dbe806cb4be760a3a1d8b396c58aa1 126 SMART SM00422 2 70 4.9E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_11430 b5dbe806cb4be760a3a1d8b396c58aa1 126 Gene3D G3DSA:1.10.1660.10 1 126 1.9E-32 T 11-10-2018 UP17_16590 dbe0e50f274a2794d93d270fbe0f6c53 86 ProDom PD060869 YQFT IG BH1387 3 68 1.0E-8 T 11-10-2018 IPR020277 Protein of unknown function DUF2624 UP17_16590 dbe0e50f274a2794d93d270fbe0f6c53 86 Pfam PF11116 Protein of unknown function (DUF2624) 2 82 6.1E-23 T 11-10-2018 IPR020277 Protein of unknown function DUF2624 UP17_15440 a41398b92d8d1efc4bffbff8e8e03d9d 65 Pfam PF10966 Protein of unknown function (DUF2768) 7 63 3.7E-24 T 11-10-2018 IPR020076 Protein of unknown function DUF2768 UP17_15440 a41398b92d8d1efc4bffbff8e8e03d9d 65 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 64 5.0E-5 T 11-10-2018 IPR020076 Protein of unknown function DUF2768 UP17_09320 881dcde130af5c89cf12db66c7aa5388 71 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 39 2.0E-5 T 11-10-2018 IPR005359 Protein with unknown function UPF0154 UP17_09320 881dcde130af5c89cf12db66c7aa5388 71 Hamap MF_00363 UPF0154 protein . 1 70 19.911 T 11-10-2018 IPR005359 Protein with unknown function UPF0154 UP17_09320 881dcde130af5c89cf12db66c7aa5388 71 Pfam PF03672 Uncharacterised protein family (UPF0154) 9 67 2.2E-30 T 11-10-2018 IPR005359 Protein with unknown function UPF0154 UP17_14720 1290e72e24073b81bdf7c38cdb1d0074 231 Gene3D G3DSA:1.10.10.10 3 88 2.9E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_14720 1290e72e24073b81bdf7c38cdb1d0074 231 SMART SM00418 9 88 3.7E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_14720 1290e72e24073b81bdf7c38cdb1d0074 231 SUPERFAMILY SSF46785 9 88 4.49E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_14720 1290e72e24073b81bdf7c38cdb1d0074 231 Pfam PF12840 Helix-turn-helix domain 10 68 5.7E-8 T 11-10-2018 UP17_23585 a07af9e2207169406785a7a4b31736fc 221 Gene3D G3DSA:2.40.260.10 41 219 1.0E-42 T 11-10-2018 IPR023365 Sortase domain superfamily UP17_23585 a07af9e2207169406785a7a4b31736fc 221 TIGRFAM TIGR01076 sortase_fam: sortase 92 210 9.7E-32 T 11-10-2018 IPR005754 Sortase family UP17_23585 a07af9e2207169406785a7a4b31736fc 221 SUPERFAMILY SSF63817 82 216 2.49E-37 T 11-10-2018 IPR023365 Sortase domain superfamily UP17_23585 a07af9e2207169406785a7a4b31736fc 221 Pfam PF04203 Sortase family 94 214 2.8E-28 T 11-10-2018 IPR005754 Sortase family UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 124 22.529 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 124 5.2E-43 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 11-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 Gene3D G3DSA:1.10.1200.120 1 126 5.5E-37 T 11-10-2018 IPR036019 Gated mechanosensitive channel UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 123 2.8E-39 T 11-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 SUPERFAMILY SSF81330 11 119 5.89E-30 T 11-10-2018 IPR036019 Gated mechanosensitive channel UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.1E-10 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 1.1E-10 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 UP17_08945 b7844f9cbbaaea4eebcdae72c3742f07 132 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 1.1E-10 T 11-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 UP17_18665 0b59462dbf6bfe12cc213223f448a0bd 151 Pfam PF02082 Transcriptional regulator 14 89 7.7E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_18665 0b59462dbf6bfe12cc213223f448a0bd 151 Gene3D G3DSA:1.10.10.10 7 149 1.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18665 0b59462dbf6bfe12cc213223f448a0bd 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 17 138 6.5E-22 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_18665 0b59462dbf6bfe12cc213223f448a0bd 151 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 55 73 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site UP17_18665 0b59462dbf6bfe12cc213223f448a0bd 151 SUPERFAMILY SSF46785 14 137 8.56E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_17065 6583ccd0534afb735d211f5da98b8c48 139 Gene3D G3DSA:1.10.10.10 1 139 2.6E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_17065 6583ccd0534afb735d211f5da98b8c48 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site UP17_17065 6583ccd0534afb735d211f5da98b8c48 139 Pfam PF02082 Transcriptional regulator 1 82 7.4E-29 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_17065 6583ccd0534afb735d211f5da98b8c48 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 124 1.6E-35 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_17065 6583ccd0534afb735d211f5da98b8c48 139 SUPERFAMILY SSF46785 2 125 7.66E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_09860 a059d1d7dc53656f56653e83fda0bc0c 439 Pfam PF07690 Major Facilitator Superfamily 24 389 4.8E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_09860 a059d1d7dc53656f56653e83fda0bc0c 439 SUPERFAMILY SSF103473 7 418 6.8E-79 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_09860 a059d1d7dc53656f56653e83fda0bc0c 439 Gene3D G3DSA:1.20.1250.20 6 427 8.3E-80 T 11-10-2018 UP17_00840 03d590b9df34e61736abd24fa1c02170 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 37.968 T 11-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 UP17_00840 03d590b9df34e61736abd24fa1c02170 265 Pfam PF02361 Cobalt transport protein 15 237 1.2E-59 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component UP17_14010 f651eaf6bb3274cfeb22a0825fdd5a05 615 SUPERFAMILY SSF51730 316 601 2.16E-67 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like UP17_14010 f651eaf6bb3274cfeb22a0825fdd5a05 615 Pfam PF02219 Methylenetetrahydrofolate reductase 316 585 6.7E-28 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 UP17_14010 f651eaf6bb3274cfeb22a0825fdd5a05 615 SUPERFAMILY SSF82282 1 359 8.76E-92 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 UP17_14010 f651eaf6bb3274cfeb22a0825fdd5a05 615 Pfam PF02574 Homocysteine S-methyltransferase 12 280 9.5E-54 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 UP17_14010 f651eaf6bb3274cfeb22a0825fdd5a05 615 Gene3D G3DSA:3.20.20.220 310 600 1.4E-50 T 11-10-2018 UP17_14010 f651eaf6bb3274cfeb22a0825fdd5a05 615 Gene3D G3DSA:3.20.20.330 1 294 1.1E-82 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 UP17_16420 262b0b5c85d6ce0868f2bc941ad2cf98 365 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 62 291 4.9E-41 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 UP17_16420 262b0b5c85d6ce0868f2bc941ad2cf98 365 Gene3D G3DSA:3.40.50.12710 1 363 5.1E-89 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 UP17_16420 262b0b5c85d6ce0868f2bc941ad2cf98 365 SUPERFAMILY SSF53335 14 356 2.61E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_23060 cdde00415163ccbcffea19a0d7775e86 145 Gene3D G3DSA:1.20.120.580 1 144 2.1E-55 T 11-10-2018 IPR037038 Bsu32300-like superfamily UP17_23060 cdde00415163ccbcffea19a0d7775e86 145 Pfam PF01934 Protein of unknown function DUF86 32 126 6.7E-18 T 11-10-2018 IPR008201 Protein of unknown function DUF86 UP17_06700 71c6be1658668af763ffa77bec7f9b05 111 Pfam PF13045 Protein of unknown function (DUF3905) 7 89 2.4E-45 T 11-10-2018 IPR024999 Protein of unknown function DUF3905 UP17_01340 a5d118e4c3de66c501d8f0aea2247df0 383 SMART SM00331 162 382 1.4E-11 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01340 a5d118e4c3de66c501d8f0aea2247df0 383 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 379 9.0E-24 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_01340 a5d118e4c3de66c501d8f0aea2247df0 383 Gene3D G3DSA:3.60.40.10 130 380 1.1E-35 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 UP17_03095 75d8492a0c8e9eaf11daf2b2e7560c75 362 SUPERFAMILY SSF51735 1 78 2.98E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03095 75d8492a0c8e9eaf11daf2b2e7560c75 362 Gene3D G3DSA:3.40.50.720 1 112 5.6E-11 T 11-10-2018 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 Gene3D G3DSA:3.40.50.300 7 595 2.1E-253 T 11-10-2018 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 SUPERFAMILY SSF52540 12 569 2.37E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 922 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 Gene3D G3DSA:1.20.1580.10 691 828 4.7E-145 T 11-10-2018 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 Gene3D G3DSA:3.30.190.20 132 241 2.1E-253 T 11-10-2018 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 SMART SM00382 631 906 0.0023 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 SMART SM00382 25 564 17.0 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 Gene3D G3DSA:1.10.8.280 286 403 2.1E-253 T 11-10-2018 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.596 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 SUPERFAMILY SSF52540 613 912 2.1E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 Gene3D G3DSA:1.20.1580.10 92 492 2.1E-253 T 11-10-2018 UP17_23620 442dce9f6c58e5e141f7e77016a050f7 959 Gene3D G3DSA:3.40.50.300 612 934 4.7E-145 T 11-10-2018 UP17_25160 dd9e2f11e88b7b2f8464c0080a9f36cc 280 SUPERFAMILY SSF53098 110 272 3.95E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_25160 dd9e2f11e88b7b2f8464c0080a9f36cc 280 Pfam PF13276 HTH-like domain 35 88 1.9E-12 T 11-10-2018 IPR025948 HTH-like domain UP17_25160 dd9e2f11e88b7b2f8464c0080a9f36cc 280 Gene3D G3DSA:3.30.420.10 112 274 5.3E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_25160 dd9e2f11e88b7b2f8464c0080a9f36cc 280 Pfam PF00665 Integrase core domain 117 233 1.0E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_09115 14f4baa88e4680c984d1f4520c51286b 276 SUPERFAMILY SSF55136 124 273 1.75E-11 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily UP17_09115 14f4baa88e4680c984d1f4520c51286b 276 SUPERFAMILY SSF46955 5 111 1.76E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_09115 14f4baa88e4680c984d1f4520c51286b 276 SMART SM00422 5 75 7.2E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_09115 14f4baa88e4680c984d1f4520c51286b 276 Gene3D G3DSA:1.10.1660.10 2 144 3.5E-26 T 11-10-2018 UP17_09115 14f4baa88e4680c984d1f4520c51286b 276 Pfam PF13411 MerR HTH family regulatory protein 6 74 6.7E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 SUPERFAMILY SSF51735 3 228 4.94E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 Gene3D G3DSA:3.40.50.720 1 238 1.2E-41 T 11-10-2018 UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.8E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11435 4096df9eda9115d28865edfc0a9672fd 255 Pfam PF00106 short chain dehydrogenase 4 195 3.7E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_09710 1e0b897edf70bbddd342222933e7e137 70 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 48 7.0E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_09710 1e0b897edf70bbddd342222933e7e137 70 Pfam PF02416 mttA/Hcf106 family 5 56 4.1E-22 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 UP17_09710 1e0b897edf70bbddd342222933e7e137 70 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 69 17.757 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_09710 1e0b897edf70bbddd342222933e7e137 70 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 5.5E-5 T 11-10-2018 UP17_09710 1e0b897edf70bbddd342222933e7e137 70 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 5.5E-5 T 11-10-2018 UP17_06200 bf1ab77c00d5127e622a602fcb05658b 230 Pfam PF04239 Protein of unknown function (DUF421) 88 204 1.3E-30 T 11-10-2018 IPR007353 Protein of unknown function DUF421 UP17_06200 bf1ab77c00d5127e622a602fcb05658b 230 Gene3D G3DSA:3.30.240.20 81 155 1.9E-22 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_06200 bf1ab77c00d5127e622a602fcb05658b 230 Gene3D G3DSA:3.30.240.20 168 229 1.3E-15 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_21680 d88efcb6f34c674ad93cb686e8ec441e 211 SUPERFAMILY SSF141571 34 209 7.46E-40 T 11-10-2018 UP17_21680 d88efcb6f34c674ad93cb686e8ec441e 211 Gene3D G3DSA:2.160.20.100 1 210 2.0E-52 T 11-10-2018 UP17_21680 d88efcb6f34c674ad93cb686e8ec441e 211 Pfam PF13599 Pentapeptide repeats (9 copies) 11 83 4.8E-9 T 11-10-2018 IPR001646 Pentapeptide repeat UP17_21680 d88efcb6f34c674ad93cb686e8ec441e 211 Pfam PF13599 Pentapeptide repeats (9 copies) 88 172 3.0E-15 T 11-10-2018 IPR001646 Pentapeptide repeat UP17_23175 866aa2956514bc843a77f3774745605e 121 SUPERFAMILY SSF110455 6 111 2.62E-30 T 11-10-2018 UP17_23175 866aa2956514bc843a77f3774745605e 121 Gene3D G3DSA:3.40.1360.20 4 120 2.2E-42 T 11-10-2018 UP17_23175 866aa2956514bc843a77f3774745605e 121 SMART SM00493 7 81 5.6E-8 T 11-10-2018 IPR006171 TOPRIM domain UP17_23175 866aa2956514bc843a77f3774745605e 121 Pfam PF01751 Toprim domain 9 75 1.8E-5 T 11-10-2018 IPR006171 TOPRIM domain UP17_22775 3b2de46b0ee08461558a890186d313a1 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 SUPERFAMILY SSF53697 4 446 1.96E-144 T 11-10-2018 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 Gene3D G3DSA:3.40.50.10490 1 56 6.3E-18 T 11-10-2018 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 Pfam PF00342 Phosphoglucose isomerase 75 426 1.0E-22 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.445 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 Gene3D G3DSA:3.40.50.10490 57 226 3.2E-146 T 11-10-2018 UP17_22775 3b2de46b0ee08461558a890186d313a1 448 Gene3D G3DSA:3.40.50.10490 227 417 3.2E-146 T 11-10-2018 UP17_09535 d6a8e158328dda2bf298727afe1215a9 86 Gene3D G3DSA:1.20.58.1000 1 83 7.7E-23 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily UP17_09535 d6a8e158328dda2bf298727afe1215a9 86 Pfam PF02583 Metal-sensitive transcriptional repressor 5 82 8.7E-24 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 UP17_15110 f4a5e7f69a399f904c2415d60ff82224 420 SUPERFAMILY SSF53098 105 280 2.58E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_15110 f4a5e7f69a399f904c2415d60ff82224 420 Pfam PF13482 RNase_H superfamily 106 274 7.8E-40 T 11-10-2018 IPR038720 YprB, ribonuclease H-like domain UP17_15110 f4a5e7f69a399f904c2415d60ff82224 420 SUPERFAMILY SSF81901 283 383 8.89E-6 T 11-10-2018 UP17_15110 f4a5e7f69a399f904c2415d60ff82224 420 Gene3D G3DSA:1.25.40.10 259 415 5.1E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_15110 f4a5e7f69a399f904c2415d60ff82224 420 Gene3D G3DSA:3.30.420.10 115 254 2.3E-5 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 SUPERFAMILY SSF51735 6 254 9.33E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 2.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.4E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.0E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 1.8E-48 T 11-10-2018 UP17_10915 dc4d2defdb07e990cd45e5c0e43fac35 263 Gene3D G3DSA:3.40.50.720 3 261 9.7E-70 T 11-10-2018 UP17_12515 453989e0e1fc9f43803bfb0664cb1e94 284 SUPERFAMILY SSF69318 57 136 6.15E-5 T 11-10-2018 UP17_24985 f97211612cc875c59a832faa72424575 278 Gene3D G3DSA:3.30.70.100 183 269 4.0E-16 T 11-10-2018 UP17_24985 f97211612cc875c59a832faa72424575 278 SUPERFAMILY SSF50182 117 179 2.55E-14 T 11-10-2018 IPR010920 LSM domain superfamily UP17_24985 f97211612cc875c59a832faa72424575 278 Pfam PF00924 Mechanosensitive ion channel 74 270 9.3E-43 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 UP17_24985 f97211612cc875c59a832faa72424575 278 Gene3D G3DSA:2.30.30.60 132 180 1.1E-20 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily UP17_24985 f97211612cc875c59a832faa72424575 278 SUPERFAMILY SSF82689 186 270 5.49E-6 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 UP17_24985 f97211612cc875c59a832faa72424575 278 SUPERFAMILY SSF82861 34 115 1.96E-15 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 UP17_17900 aa4e630747880fafac6edabcda720a38 257 SUPERFAMILY SSF52096 1 257 8.56E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_17900 aa4e630747880fafac6edabcda720a38 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 UP17_17900 aa4e630747880fafac6edabcda720a38 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 256 5.1E-64 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_17900 aa4e630747880fafac6edabcda720a38 257 Gene3D G3DSA:3.90.226.10 1 257 8.3E-91 T 11-10-2018 UP17_08270 7065e9693caf980330bd94c12617822a 629 Pfam PF00733 Asparagine synthase 239 609 9.0E-105 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 UP17_08270 7065e9693caf980330bd94c12617822a 629 SUPERFAMILY SSF52402 234 604 3.87E-85 T 11-10-2018 UP17_08270 7065e9693caf980330bd94c12617822a 629 Gene3D G3DSA:3.60.20.10 5 188 5.5E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_08270 7065e9693caf980330bd94c12617822a 629 SUPERFAMILY SSF56235 1 223 2.06E-60 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_08270 7065e9693caf980330bd94c12617822a 629 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 546 2.0E-169 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 UP17_08270 7065e9693caf980330bd94c12617822a 629 Pfam PF13537 Glutamine amidotransferase domain 51 168 4.8E-46 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain UP17_08270 7065e9693caf980330bd94c12617822a 629 PIRSF PIRSF001589 1 627 1.8E-191 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 UP17_04635 f51b13db3f59c3852f2ff9e2374b036b 206 SUPERFAMILY SSF109755 78 198 5.23E-5 T 11-10-2018 UP17_04635 f51b13db3f59c3852f2ff9e2374b036b 206 Pfam PF01865 Protein of unknown function DUF47 21 203 1.5E-24 T 11-10-2018 IPR018445 Putative phosphate transport regulator UP17_04635 f51b13db3f59c3852f2ff9e2374b036b 206 Gene3D G3DSA:1.20.58.220 10 206 1.2E-53 T 11-10-2018 IPR038078 PhoU-like domain superfamily UP17_06170 3c7755c173e1fa5d3b35e8129d9f65c1 240 Pfam PF00756 Putative esterase 15 238 3.5E-50 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 UP17_06170 3c7755c173e1fa5d3b35e8129d9f65c1 240 Gene3D G3DSA:3.40.50.1820 2 240 2.7E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_06170 3c7755c173e1fa5d3b35e8129d9f65c1 240 SUPERFAMILY SSF53474 5 236 9.05E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_15285 9dd4eb1a48fd93236e523ecb8de9d123 237 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 125 5.0E-24 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 UP17_15285 9dd4eb1a48fd93236e523ecb8de9d123 237 SUPERFAMILY SSF102588 7 228 3.4E-56 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_15285 9dd4eb1a48fd93236e523ecb8de9d123 237 Gene3D G3DSA:3.40.50.10320 5 237 6.6E-88 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_15285 9dd4eb1a48fd93236e523ecb8de9d123 237 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 7 228 1.3E-96 T 11-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 UP17_00670 3af9af7a7718723f146dd23a3af34281 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.326 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 UP17_00670 3af9af7a7718723f146dd23a3af34281 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.0E-69 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 UP17_00670 3af9af7a7718723f146dd23a3af34281 156 Gene3D G3DSA:1.10.455.10 2 156 1.4E-62 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily UP17_00670 3af9af7a7718723f146dd23a3af34281 156 SUPERFAMILY SSF47973 1 149 3.92E-60 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily UP17_00670 3af9af7a7718723f146dd23a3af34281 156 PIRSF PIRSF002122 4 156 8.9E-57 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 UP17_00670 3af9af7a7718723f146dd23a3af34281 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.7E-65 T 11-10-2018 IPR023798 Ribosomal protein S7 domain UP17_04445 6fdeb284e00a4f453be6fa196014e503 336 Hamap MF_00313 Glutaminase [glsA]. 23 336 44.318 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 UP17_04445 6fdeb284e00a4f453be6fa196014e503 336 Gene3D G3DSA:1.10.1500.10 80 217 6.6E-122 T 11-10-2018 UP17_04445 6fdeb284e00a4f453be6fa196014e503 336 SUPERFAMILY SSF56601 23 336 3.85E-117 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_04445 6fdeb284e00a4f453be6fa196014e503 336 Pfam PF04960 Glutaminase 41 336 1.2E-105 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 UP17_04445 6fdeb284e00a4f453be6fa196014e503 336 Gene3D G3DSA:3.40.710.10 56 336 6.6E-122 T 11-10-2018 UP17_04445 6fdeb284e00a4f453be6fa196014e503 336 TIGRFAM TIGR03814 Gln_ase: glutaminase A 27 336 1.6E-119 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 UP17_22545 948a94ce82d657a6f7eb0140762692e7 89 Pfam PF06949 Protein of unknown function (DUF1292) 15 84 7.9E-10 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 UP17_15820 5e3536712c3a95656195919cb244535e 142 SUPERFAMILY SSF46785 5 113 2.21E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_15820 5e3536712c3a95656195919cb244535e 142 SMART SM00347 27 122 2.3E-23 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_15820 5e3536712c3a95656195919cb244535e 142 Pfam PF01047 MarR family 35 92 1.1E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_15820 5e3536712c3a95656195919cb244535e 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 3.7E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_15820 5e3536712c3a95656195919cb244535e 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 3.7E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_15820 5e3536712c3a95656195919cb244535e 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 3.7E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_15820 5e3536712c3a95656195919cb244535e 142 Gene3D G3DSA:1.10.10.10 1 141 4.5E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_02645 d02879623d6758d97beda1222f6aef2c 156 SUPERFAMILY SSF52121 5 153 1.57E-62 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_02645 d02879623d6758d97beda1222f6aef2c 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 7.2E-60 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_02645 d02879623d6758d97beda1222f6aef2c 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 5.9E-59 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_02645 d02879623d6758d97beda1222f6aef2c 156 Gene3D G3DSA:3.40.50.960 3 153 1.7E-63 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_02645 d02879623d6758d97beda1222f6aef2c 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 31.701 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 SUPERFAMILY SSF52743 439 721 1.96E-82 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 Gene3D G3DSA:2.60.120.380 25 141 7.9E-5 T 11-10-2018 UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 Gene3D G3DSA:2.60.40.10 724 790 1.4E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 Gene3D G3DSA:2.60.40.10 888 964 1.9E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 Gene3D G3DSA:2.60.40.10 804 881 3.2E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 Gene3D G3DSA:2.60.40.10 971 1047 5.7E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 Pfam PF00082 Subtilase family 440 675 1.0E-48 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 483 493 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 PRINTS PR00723 Subtilisin serine protease family (S8) signature 439 458 4.8E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 PRINTS PR00723 Subtilisin serine protease family (S8) signature 479 492 4.8E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 PRINTS PR00723 Subtilisin serine protease family (S8) signature 633 649 4.8E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 Gene3D G3DSA:3.40.50.200 399 683 1.1E-80 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 UP17_21990 6fca40d3c614be9210171102dd5687e3 1054 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 634 644 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site UP17_01355 5b2937532fd3d23a8b2d2183d0c1dd18 489 PIRSF PIRSF026631 1 489 2.1E-120 T 11-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 UP17_01355 5b2937532fd3d23a8b2d2183d0c1dd18 489 Pfam PF03703 Bacterial PH domain 64 142 3.8E-19 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_01355 5b2937532fd3d23a8b2d2183d0c1dd18 489 Pfam PF03703 Bacterial PH domain 254 330 1.4E-13 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_01355 5b2937532fd3d23a8b2d2183d0c1dd18 489 Pfam PF03703 Bacterial PH domain 400 459 2.0E-8 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_04510 8deafa2592dc1d10c206f4b076fbc475 608 Pfam PF13520 Amino acid permease 29 445 7.1E-30 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_04510 8deafa2592dc1d10c206f4b076fbc475 608 Gene3D G3DSA:1.20.1740.10 48 463 1.7E-20 T 11-10-2018 UP17_24225 5fcf63c62a35dca9bfc3e86eedfd7283 188 Pfam PF02659 Putative manganese efflux pump 34 185 3.7E-36 T 11-10-2018 IPR003810 Putative manganese efflux pump UP17_24225 5fcf63c62a35dca9bfc3e86eedfd7283 188 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 6 188 20.825 T 11-10-2018 IPR022929 Putative manganese efflux pump MntP UP17_07150 1edac06b2b238e09292e7af463782b67 120 Gene3D G3DSA:3.30.310.100 1 119 2.6E-44 T 11-10-2018 IPR036491 YugN-like superfamily UP17_07150 1edac06b2b238e09292e7af463782b67 120 Pfam PF08868 YugN-like family 8 102 3.0E-12 T 11-10-2018 IPR014967 Uncharacterised protein family, YugN-like UP17_07150 1edac06b2b238e09292e7af463782b67 120 SUPERFAMILY SSF160755 2 114 2.48E-38 T 11-10-2018 IPR036491 YugN-like superfamily UP17_14505 7230b4d5cf6a81872333600fbefe854a 185 Pfam PF02669 K+-transporting ATPase, c chain 3 183 8.9E-74 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 UP17_14505 7230b4d5cf6a81872333600fbefe854a 185 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 184 2.6E-56 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 UP17_14505 7230b4d5cf6a81872333600fbefe854a 185 PIRSF PIRSF001296 1 185 8.6E-74 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 UP17_14505 7230b4d5cf6a81872333600fbefe854a 185 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 184 32.524 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 UP17_06290 19cac8067291763f4efca8869a17606b 102 Gene3D G3DSA:2.60.300.12 1 99 1.7E-8 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_06290 19cac8067291763f4efca8869a17606b 102 SUPERFAMILY SSF89360 3 93 4.9E-9 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 SMART SM00478 39 187 9.4E-65 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 SUPERFAMILY SSF48150 1 210 6.75E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 TIGRFAM TIGR01083 nth: endonuclease III 6 196 5.3E-85 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 PIRSF PIRSF001435 1 214 3.4E-56 T 11-10-2018 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 Pfam PF00633 Helix-hairpin-helix motif 101 128 1.9E-9 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 SMART SM00525 188 208 4.4E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 Gene3D G3DSA:1.10.340.30 22 133 7.1E-81 T 11-10-2018 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 2.2E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 170 4.1E-22 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 Hamap MF_00942 Endonuclease III [nth]. 1 211 38.145 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 UP17_15165 7aeaa4e7f3aeff750b8be85b44e00a85 218 Gene3D G3DSA:1.10.1670.10 16 205 7.1E-81 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 UP17_04245 55be43b58238d1bb5b2caa3b8dbb82cd 368 Pfam PF03845 Spore germination protein 5 317 5.3E-56 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_04245 55be43b58238d1bb5b2caa3b8dbb82cd 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 359 1.8E-61 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_02445 df9014654b8aee46b5420cbebe2b4179 186 Pfam PF00881 Nitroreductase family 7 165 4.8E-29 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_02445 df9014654b8aee46b5420cbebe2b4179 186 SUPERFAMILY SSF55469 1 183 2.09E-37 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_02445 df9014654b8aee46b5420cbebe2b4179 186 Gene3D G3DSA:3.40.109.10 1 186 1.3E-46 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_02445 df9014654b8aee46b5420cbebe2b4179 186 PIRSF PIRSF000232 1 186 5.9E-46 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like UP17_05525 101b3f442b83697f94ae808b770f004b 312 Pfam PF01336 OB-fold nucleic acid binding domain 14 88 2.0E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 UP17_05525 101b3f442b83697f94ae808b770f004b 312 Pfam PF01966 HD domain 162 278 3.9E-10 T 11-10-2018 IPR006674 HD domain UP17_05525 101b3f442b83697f94ae808b770f004b 312 SUPERFAMILY SSF109604 143 279 4.4E-15 T 11-10-2018 UP17_05525 101b3f442b83697f94ae808b770f004b 312 Gene3D G3DSA:2.40.50.140 10 102 6.1E-8 T 11-10-2018 UP17_05525 101b3f442b83697f94ae808b770f004b 312 SUPERFAMILY SSF50249 31 96 4.86E-7 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_05525 101b3f442b83697f94ae808b770f004b 312 Gene3D G3DSA:1.10.3210.10 121 294 8.9E-12 T 11-10-2018 UP17_05525 101b3f442b83697f94ae808b770f004b 312 SMART SM00471 156 288 1.5E-4 T 11-10-2018 IPR003607 HD/PDEase domain UP17_12560 226323457223bd28068b43475121a3d0 451 Pfam PF02447 GntP family permease 6 380 3.7E-7 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_18775 4a4edc58842d283aa90ce775279d947f 533 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 367 514 2.2E-25 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain UP17_18775 4a4edc58842d283aa90ce775279d947f 533 PIRSF PIRSF038958 1 529 9.6E-114 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type UP17_18775 4a4edc58842d283aa90ce775279d947f 533 Pfam PF01943 Polysaccharide biosynthesis protein 5 314 3.1E-41 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 SUPERFAMILY SSF100879 258 357 4.51E-15 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 Gene3D G3DSA:1.10.150.20 191 243 5.3E-16 T 11-10-2018 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 SUPERFAMILY SSF56672 12 247 2.58E-55 T 11-10-2018 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 Gene3D G3DSA:3.30.70.270 12 169 2.2E-31 T 11-10-2018 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 Pfam PF11798 IMS family HHH motif 179 211 8.8E-9 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 365 9.7E-18 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 Pfam PF00817 impB/mucB/samB family 15 164 6.5E-28 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 Gene3D G3DSA:3.30.1490.100 258 366 1.1E-15 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 UP17_15845 062b4431d54e7b07311a18a5c6b3eac7 419 Gene3D G3DSA:2.30.40.20 31 83 2.2E-31 T 11-10-2018 UP17_04710 860a0a6625c9e4438f188718f763baf3 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 67 1.9E-13 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 UP17_04710 860a0a6625c9e4438f188718f763baf3 280 SUPERFAMILY SSF53697 95 249 4.85E-21 T 11-10-2018 UP17_04710 860a0a6625c9e4438f188718f763baf3 280 Gene3D G3DSA:3.40.50.10490 94 274 1.4E-28 T 11-10-2018 UP17_04710 860a0a6625c9e4438f188718f763baf3 280 Pfam PF01380 SIS domain 127 249 3.5E-14 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_04710 860a0a6625c9e4438f188718f763baf3 280 SUPERFAMILY SSF46689 1 74 3.58E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_04710 860a0a6625c9e4438f188718f763baf3 280 Gene3D G3DSA:1.10.10.10 1 75 8.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 Gene3D G3DSA:1.10.10.10 124 223 1.1E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 Gene3D G3DSA:3.40.50.2300 1 120 1.1E-35 T 11-10-2018 UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.9E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 SMART SM00448 1 111 7.7E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 SUPERFAMILY SSF52172 1 121 9.39E-38 T 11-10-2018 IPR011006 CheY-like superfamily UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 SMART SM00862 145 220 5.8E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 SUPERFAMILY SSF46894 127 221 3.4E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_24725 d374e537b06788f3f559f45cd93fbae7 223 Pfam PF00072 Response regulator receiver domain 3 112 1.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_08720 c1eea861ad1cff3d3ba976f7316643ab 214 Gene3D G3DSA:3.40.50.850 2 204 2.7E-46 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_08720 c1eea861ad1cff3d3ba976f7316643ab 214 SUPERFAMILY SSF52499 3 204 2.09E-49 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_08720 c1eea861ad1cff3d3ba976f7316643ab 214 Pfam PF00857 Isochorismatase family 12 163 3.7E-24 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 UP17_04880 9e991f306a421c6ab7ca832d9e8878e2 516 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 148 173 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_04880 9e991f306a421c6ab7ca832d9e8878e2 516 Gene3D G3DSA:1.20.1730.10 20 486 1.3E-65 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_04880 9e991f306a421c6ab7ca832d9e8878e2 516 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 1.8E-79 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_04880 9e991f306a421c6ab7ca832d9e8878e2 516 Pfam PF00474 Sodium:solute symporter family 33 434 5.7E-113 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_20350 daabe5789eff08eec2e0030e77e00215 193 SUPERFAMILY SSF102405 3 176 3.21E-59 T 11-10-2018 UP17_20350 daabe5789eff08eec2e0030e77e00215 193 Gene3D G3DSA:3.40.50.450 1 193 6.6E-76 T 11-10-2018 UP17_20350 daabe5789eff08eec2e0030e77e00215 193 Pfam PF03641 Possible lysine decarboxylase 46 174 9.5E-43 T 11-10-2018 IPR031100 LOG family UP17_20350 daabe5789eff08eec2e0030e77e00215 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 7.2E-60 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG UP17_25365 62f2c82f96ba353f5e2ed9dd790a9cea 66 Pfam PF08282 haloacid dehalogenase-like hydrolase 2 59 3.9E-14 T 11-10-2018 UP17_25365 62f2c82f96ba353f5e2ed9dd790a9cea 66 Gene3D G3DSA:3.40.50.1000 1 64 2.9E-14 T 11-10-2018 IPR023214 HAD superfamily UP17_25365 62f2c82f96ba353f5e2ed9dd790a9cea 66 SUPERFAMILY SSF56784 2 61 4.3E-13 T 11-10-2018 IPR036412 HAD-like superfamily UP17_06370 3979ab43e453d8bad5c329962d032a35 99 ProDom PD068665 YXCD 1 98 3.0E-28 T 11-10-2018 IPR020516 Uncharacterised protein family YxcD UP17_06370 3979ab43e453d8bad5c329962d032a35 99 Pfam PF10850 Protein of unknown function (DUF2653) 1 87 1.2E-37 T 11-10-2018 IPR020516 Uncharacterised protein family YxcD UP17_10980 ba74992526aed861971732c5a87ffb95 389 SUPERFAMILY SSF56601 51 372 7.33E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_10980 ba74992526aed861971732c5a87ffb95 389 Pfam PF00144 Beta-lactamase 62 372 1.4E-69 T 11-10-2018 IPR001466 Beta-lactamase-related UP17_10980 ba74992526aed861971732c5a87ffb95 389 Gene3D G3DSA:3.40.710.10 47 389 3.2E-138 T 11-10-2018 UP17_19275 98a69984851fa971f337aef2a901a372 188 SUPERFAMILY SSF88659 103 178 1.66E-10 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_19275 98a69984851fa971f337aef2a901a372 188 Pfam PF04542 Sigma-70 region 2 24 92 1.1E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_19275 98a69984851fa971f337aef2a901a372 188 Pfam PF08281 Sigma-70, region 4 121 174 1.2E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_19275 98a69984851fa971f337aef2a901a372 188 SUPERFAMILY SSF88946 7 110 8.11E-16 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_19275 98a69984851fa971f337aef2a901a372 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 177 1.0E-22 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_19275 98a69984851fa971f337aef2a901a372 188 Gene3D G3DSA:1.10.10.10 101 180 4.9E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19275 98a69984851fa971f337aef2a901a372 188 Gene3D G3DSA:1.10.1740.10 6 90 5.2E-15 T 11-10-2018 UP17_13565 56d335a5a7b49c751e8b46b4b7f1e26b 400 Gene3D G3DSA:1.20.1250.20 196 396 5.7E-35 T 11-10-2018 UP17_13565 56d335a5a7b49c751e8b46b4b7f1e26b 400 SUPERFAMILY SSF103473 5 388 1.31E-48 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_13565 56d335a5a7b49c751e8b46b4b7f1e26b 400 Gene3D G3DSA:1.20.1250.20 6 194 3.5E-30 T 11-10-2018 UP17_13565 56d335a5a7b49c751e8b46b4b7f1e26b 400 Pfam PF12832 MFS_1 like family 12 365 5.2E-46 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain UP17_16885 c62aff953e75bd6b01bc036151997cc7 261 Pfam PF02666 Phosphatidylserine decarboxylase 59 256 3.8E-53 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 UP17_16885 c62aff953e75bd6b01bc036151997cc7 261 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 7 259 36.457 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 UP17_16885 c62aff953e75bd6b01bc036151997cc7 261 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 50 257 4.9E-52 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 UP17_10510 e961b3f9748b7e925f1ce8c3fc0812f7 491 SUPERFAMILY SSF53720 14 490 8.64E-167 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_10510 e961b3f9748b7e925f1ce8c3fc0812f7 491 Gene3D G3DSA:3.40.605.10 20 483 7.4E-182 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_10510 e961b3f9748b7e925f1ce8c3fc0812f7 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_10510 e961b3f9748b7e925f1ce8c3fc0812f7 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 289 300 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_10510 e961b3f9748b7e925f1ce8c3fc0812f7 491 Pfam PF00171 Aldehyde dehydrogenase family 28 487 5.9E-175 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_10510 e961b3f9748b7e925f1ce8c3fc0812f7 491 Gene3D G3DSA:3.40.309.10 266 457 7.4E-182 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_23240 efdd974b63e488acd4132bcf2bde19ef 360 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 357 4.9E-26 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_23240 efdd974b63e488acd4132bcf2bde19ef 360 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 359 1.3E-74 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_23240 efdd974b63e488acd4132bcf2bde19ef 360 Gene3D G3DSA:3.30.300.210 219 360 1.2E-12 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_10880 bfae557323e1b0b9fe8b02179b9c36b8 441 PIRSF PIRSF002746 1 441 7.5E-144 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_10880 bfae557323e1b0b9fe8b02179b9c36b8 441 Pfam PF02447 GntP family permease 6 438 2.4E-145 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_10880 bfae557323e1b0b9fe8b02179b9c36b8 441 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 440 2.0E-137 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_05395 e8fd6cc0ac1c0ca0f8601fbb85c8d8d3 67 PIRSF PIRSF037692 1 67 3.5E-29 T 11-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 UP17_05395 e8fd6cc0ac1c0ca0f8601fbb85c8d8d3 67 Pfam PF17277 Family of unknown function (DUF5342) 1 67 2.3E-31 T 11-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 UP17_05395 e8fd6cc0ac1c0ca0f8601fbb85c8d8d3 67 ProDom PD056348 YHEE BH1143 1 67 2.0E-15 T 11-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 UP17_20815 c2c3ad451175e39ec0e02722ab070925 132 Pfam PF10694 Protein of unknown function (DUF2500) 21 128 4.1E-33 T 11-10-2018 IPR019635 Protein of unknown function DUF2500 UP17_20815 c2c3ad451175e39ec0e02722ab070925 132 Gene3D G3DSA:2.40.50.660 47 132 2.0E-10 T 11-10-2018 UP17_17915 708817f0dce220a125a35c022beaffe1 252 Pfam PF00583 Acetyltransferase (GNAT) family 154 238 2.8E-10 T 11-10-2018 IPR000182 GNAT domain UP17_17915 708817f0dce220a125a35c022beaffe1 252 SUPERFAMILY SSF55729 123 241 1.92E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_17915 708817f0dce220a125a35c022beaffe1 252 Gene3D G3DSA:3.40.630.30 107 251 3.4E-17 T 11-10-2018 UP17_22135 a47d86498de424c48878b08e247b366e 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 52 68 5.2E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps UP17_22135 a47d86498de424c48878b08e247b366e 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 5.2E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps UP17_22135 a47d86498de424c48878b08e247b366e 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 28 44 5.2E-14 T 11-10-2018 IPR002177 DNA-binding protein Dps UP17_22135 a47d86498de424c48878b08e247b366e 146 ProSitePatterns PS00819 Dps protein family signature 2. 54 68 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 UP17_22135 a47d86498de424c48878b08e247b366e 146 PIRSF PIRSF005900 2 146 2.6E-44 T 11-10-2018 IPR002177 DNA-binding protein Dps UP17_22135 a47d86498de424c48878b08e247b366e 146 Pfam PF00210 Ferritin-like domain 11 145 4.1E-30 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 UP17_22135 a47d86498de424c48878b08e247b366e 146 ProSitePatterns PS00818 Dps protein family signature 1. 28 44 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 UP17_22135 a47d86498de424c48878b08e247b366e 146 Gene3D G3DSA:1.20.1260.10 1 144 1.4E-51 T 11-10-2018 IPR012347 Ferritin-like UP17_22135 a47d86498de424c48878b08e247b366e 146 SUPERFAMILY SSF47240 7 146 9.57E-43 T 11-10-2018 IPR009078 Ferritin-like superfamily UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 Gene3D G3DSA:3.50.50.60 7 300 6.6E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 8.8E-38 T 11-10-2018 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 8.8E-38 T 11-10-2018 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 8.8E-38 T 11-10-2018 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 8.8E-38 T 11-10-2018 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 8.8E-38 T 11-10-2018 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 304 2.9E-119 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 Gene3D G3DSA:3.50.50.60 116 239 6.6E-115 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 293 1.5E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 SUPERFAMILY SSF51905 2 301 1.19E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_23530 137c6ce5ac37de203ef53e3ae1c28c46 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 5.0E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 SUPERFAMILY SSF102114 19 285 1.7E-64 T 11-10-2018 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 TIGRFAM TIGR00510 lipA: lipoyl synthase 6 286 3.5E-122 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 SMART SM00729 55 263 3.2E-14 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 Pfam PF04055 Radical SAM superfamily 62 222 8.6E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 PIRSF PIRSF005963 2 292 7.3E-139 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 Hamap MF_00206 Lipoyl synthase [lipA]. 1 292 145.704 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 6 43 1.9E-10 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 UP17_11890 dcab4face40df743c4664d905a9bda4f 292 Gene3D G3DSA:3.20.20.70 12 266 5.8E-26 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_06120 c9579f7cf3d4a4d971e7cf8dc23726fc 338 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 336 1.1E-152 T 11-10-2018 IPR010894 Stage V sporulation AD UP17_06120 c9579f7cf3d4a4d971e7cf8dc23726fc 338 PIRSF PIRSF011570 1 338 5.3E-152 T 11-10-2018 IPR010894 Stage V sporulation AD UP17_06120 c9579f7cf3d4a4d971e7cf8dc23726fc 338 Gene3D G3DSA:3.40.47.40 1 338 5.1E-145 T 11-10-2018 IPR038369 Stage V sporulation AD superfamily UP17_06120 c9579f7cf3d4a4d971e7cf8dc23726fc 338 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 336 1.9E-149 T 11-10-2018 IPR010894 Stage V sporulation AD UP17_06120 c9579f7cf3d4a4d971e7cf8dc23726fc 338 SUPERFAMILY SSF53901 54 313 2.57E-16 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 344 536 2.3E-31 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 444 452 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 Gene3D G3DSA:3.30.230.10 345 553 1.5E-49 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 SMART SM00382 89 267 1.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 SUPERFAMILY SSF52540 55 328 1.95E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 SUPERFAMILY SSF54211 350 535 7.97E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 266 1.5E-18 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 3.7E-31 T 11-10-2018 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 471 490 3.7E-31 T 11-10-2018 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 3.7E-31 T 11-10-2018 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 441 460 3.7E-31 T 11-10-2018 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 494 512 3.7E-31 T 11-10-2018 UP17_17690 a8e4977b12b1a1c9020d37760044df70 556 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 6 535 5.9E-272 T 11-10-2018 IPR014251 Sporulation protease LonB UP17_23050 2c9d39a7e4fe60313eeb66ffef954c3a 165 Pfam PF04608 Phosphatidylglycerophosphatase A 22 158 8.5E-20 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 UP17_23050 2c9d39a7e4fe60313eeb66ffef954c3a 165 PIRSF PIRSF019587 4 165 7.2E-75 T 11-10-2018 IPR026038 Putative phosphatidylglycerophosphatase UP17_23050 2c9d39a7e4fe60313eeb66ffef954c3a 165 Gene3D G3DSA:1.10.3760.10 2 165 4.0E-73 T 11-10-2018 UP17_23050 2c9d39a7e4fe60313eeb66ffef954c3a 165 SUPERFAMILY SSF101307 11 161 1.44E-53 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 UP17_13430 1804d2d72ca8a98639b503ea875d5d6f 320 SUPERFAMILY SSF82282 14 314 1.26E-85 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 UP17_13430 1804d2d72ca8a98639b503ea875d5d6f 320 Gene3D G3DSA:3.20.20.330 3 311 4.4E-112 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 UP17_13430 1804d2d72ca8a98639b503ea875d5d6f 320 PIRSF PIRSF037505 6 105 1.2E-4 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 UP17_13430 1804d2d72ca8a98639b503ea875d5d6f 320 PIRSF PIRSF037505 265 318 0.06 T 11-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 UP17_13430 1804d2d72ca8a98639b503ea875d5d6f 320 Pfam PF02574 Homocysteine S-methyltransferase 18 310 2.2E-79 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 SUPERFAMILY SSF103491 1 421 1.57E-131 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 Gene3D G3DSA:1.10.3370.10 1 426 2.4E-159 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 Pfam PF00344 SecY translocase 68 414 3.4E-115 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 426 2.2E-149 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 3.7E-101 T 11-10-2018 UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 430 29.46 T 11-10-2018 IPR026593 Protein translocase subunit SecY UP17_00790 7b0cb62e79a2cccf8cfbf255ab4c128b 431 PIRSF PIRSF004557 1 431 4.8E-129 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 Gene3D G3DSA:3.60.120.10 21 371 9.7E-114 T 11-10-2018 IPR005801 ADC synthase GO:0009058 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 SUPERFAMILY SSF56752 351 577 1.23E-38 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 PRINTS PR00095 Anthranilate synthase component I signature 324 338 1.1E-7 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 PRINTS PR00095 Anthranilate synthase component I signature 215 228 1.1E-7 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 PRINTS PR00095 Anthranilate synthase component I signature 309 323 1.1E-7 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 PRINTS PR00095 Anthranilate synthase component I signature 229 242 1.1E-7 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 Gene3D G3DSA:3.20.10.10 454 580 7.8E-34 T 11-10-2018 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 58 372 2.7E-110 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 Gene3D G3DSA:3.30.470.10 372 451 1.6E-17 T 11-10-2018 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 Pfam PF00425 chorismate binding enzyme 115 369 3.3E-87 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal UP17_13005 0835f65c4d10b33befcc93f08b904158 581 Pfam PF01063 Amino-transferase class IV 382 577 1.4E-34 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 UP17_13005 0835f65c4d10b33befcc93f08b904158 581 SUPERFAMILY SSF56322 25 373 1.28E-107 T 11-10-2018 IPR005801 ADC synthase GO:0009058 UP17_15260 ffc236288f2eb044e87c01369fdbb31e 282 SUPERFAMILY SSF52374 1 280 1.23E-99 T 11-10-2018 UP17_15260 ffc236288f2eb044e87c01369fdbb31e 282 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 7.1E-97 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 UP17_15260 ffc236288f2eb044e87c01369fdbb31e 282 Gene3D G3DSA:3.40.50.620 1 177 7.2E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_15260 ffc236288f2eb044e87c01369fdbb31e 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 37.423 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 UP17_15260 ffc236288f2eb044e87c01369fdbb31e 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 3.9E-107 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 UP17_15260 ffc236288f2eb044e87c01369fdbb31e 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 78 6.9E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_15260 ffc236288f2eb044e87c01369fdbb31e 282 Gene3D G3DSA:3.30.1300.10 178 277 1.3E-29 T 11-10-2018 UP17_08765 b19d97f42b13036ca165b887f4935e33 98 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 9.1E-17 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_08765 b19d97f42b13036ca165b887f4935e33 98 SUPERFAMILY SSF46785 6 96 2.06E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_08765 b19d97f42b13036ca165b887f4935e33 98 Gene3D G3DSA:1.10.10.10 1 98 1.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18030 2c2da19d8a2c52b5df5453d6b4c020e2 162 Gene3D G3DSA:1.10.4010.10 1 162 1.4E-12 T 11-10-2018 UP17_18030 2c2da19d8a2c52b5df5453d6b4c020e2 162 Pfam PF08761 dUTPase 3 162 6.8E-48 T 11-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 UP17_18030 2c2da19d8a2c52b5df5453d6b4c020e2 162 PIRSF PIRSF030140 1 162 8.8E-52 T 11-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 UP17_18030 2c2da19d8a2c52b5df5453d6b4c020e2 162 SUPERFAMILY SSF101386 1 162 5.89E-39 T 11-10-2018 UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 Pfam PF16403 Domain of unknown function (DUF5011) 345 401 2.9E-11 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 Pfam PF16403 Domain of unknown function (DUF5011) 424 476 4.4E-12 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 Pfam PF16403 Domain of unknown function (DUF5011) 264 319 2.0E-12 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 Gene3D G3DSA:2.60.120.200 15 241 5.2E-46 T 11-10-2018 UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 SUPERFAMILY SSF49899 24 248 2.26E-18 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 Gene3D G3DSA:2.60.40.10 405 487 6.8E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 Gene3D G3DSA:2.60.40.10 325 404 8.3E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_25580 c35996436dbeaa082979b734d0c2c42f 632 Gene3D G3DSA:2.60.40.10 243 324 1.5E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold UP17_10375 708f08b26d8f63df1761ab403cac4549 281 SUPERFAMILY SSF52540 5 232 2.13E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10375 708f08b26d8f63df1761ab403cac4549 281 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_10375 708f08b26d8f63df1761ab403cac4549 281 Gene3D G3DSA:3.40.50.300 5 279 1.1E-68 T 11-10-2018 UP17_10375 708f08b26d8f63df1761ab403cac4549 281 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 15 204 1.3E-75 T 11-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 UP17_10375 708f08b26d8f63df1761ab403cac4549 281 Pfam PF00005 ABC transporter 23 170 7.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_10375 708f08b26d8f63df1761ab403cac4549 281 SMART SM00382 31 218 9.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_15340 4d3f3e876b446cfcec9e8d6a506cc4aa 168 SUPERFAMILY SSF50022 3 159 2.88E-28 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_15340 4d3f3e876b446cfcec9e8d6a506cc4aa 168 Gene3D G3DSA:2.102.10.10 39 165 1.8E-23 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 UP17_15340 4d3f3e876b446cfcec9e8d6a506cc4aa 168 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 7 38 2.0E-6 T 11-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 UP17_15340 4d3f3e876b446cfcec9e8d6a506cc4aa 168 Pfam PF00355 Rieske [2Fe-2S] domain 84 148 2.1E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 UP17_18010 8327977ad7c11199603d2e3f3187450d 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 62.232 T 11-10-2018 IPR022822 Lactate utilization protein A GO:0006089 UP17_18010 8327977ad7c11199603d2e3f3187450d 238 Pfam PF02754 Cysteine-rich domain 3 84 6.5E-18 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_18010 8327977ad7c11199603d2e3f3187450d 238 Pfam PF02754 Cysteine-rich domain 132 215 2.7E-15 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_09215 6773793c4f509358b5fe3b2acf67e9db 483 Gene3D G3DSA:3.30.1360.60 1 77 8.5E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_09215 6773793c4f509358b5fe3b2acf67e9db 483 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_09215 6773793c4f509358b5fe3b2acf67e9db 483 Pfam PF02378 Phosphotransferase system, EIIC 111 408 1.8E-38 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_09215 6773793c4f509358b5fe3b2acf67e9db 483 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 110 6.6E-16 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 UP17_09215 6773793c4f509358b5fe3b2acf67e9db 483 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 466 8.2E-215 T 11-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 UP17_09215 6773793c4f509358b5fe3b2acf67e9db 483 Pfam PF00367 phosphotransferase system, EIIB 11 42 1.2E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_09215 6773793c4f509358b5fe3b2acf67e9db 483 SUPERFAMILY SSF55604 8 82 5.62E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_08745 33066d5128bdf3fbd4024040642fb857 318 Gene3D G3DSA:3.10.180.10 69 212 1.6E-115 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_08745 33066d5128bdf3fbd4024040642fb857 318 Gene3D G3DSA:3.10.180.10 9 305 1.6E-115 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_08745 33066d5128bdf3fbd4024040642fb857 318 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 130 3.5E-14 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_08745 33066d5128bdf3fbd4024040642fb857 318 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 162 268 1.9E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_08745 33066d5128bdf3fbd4024040642fb857 318 SUPERFAMILY SSF54593 6 298 5.93E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_23805 3cc870c2933546df152c1e51bca40638 380 Gene3D G3DSA:3.30.565.10 246 379 2.8E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23805 3cc870c2933546df152c1e51bca40638 380 Pfam PF07730 Histidine kinase 180 248 6.5E-15 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 UP17_23805 3cc870c2933546df152c1e51bca40638 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 377 3.9E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_23805 3cc870c2933546df152c1e51bca40638 380 SUPERFAMILY SSF55874 268 377 1.7E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_23805 3cc870c2933546df152c1e51bca40638 380 SMART SM00387 287 380 4.6E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_23805 3cc870c2933546df152c1e51bca40638 380 PIRSF PIRSF003169 1 380 1.9E-150 T 11-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 UP17_23805 3cc870c2933546df152c1e51bca40638 380 Pfam PF05384 Sensor protein DegS 12 170 8.6E-54 T 11-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 Gene3D G3DSA:3.40.250.10 2 147 9.9E-42 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 SUPERFAMILY SSF52821 5 146 1.83E-36 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 SMART SM00450 5 131 3.5E-20 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 SMART SM00450 156 272 3.0E-16 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 Gene3D G3DSA:3.40.250.10 159 275 8.0E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 Pfam PF00581 Rhodanese-like domain 8 127 1.6E-18 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 Pfam PF00581 Rhodanese-like domain 164 267 9.8E-15 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_15045 603bf4e8d046a20286216eb886e21bb0 275 SUPERFAMILY SSF52821 154 275 4.45E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_23685 3afb50e46735a393660e294d4eb4cf24 228 SMART SM00382 27 214 4.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_23685 3afb50e46735a393660e294d4eb4cf24 228 SUPERFAMILY SSF52540 1 222 3.03E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23685 3afb50e46735a393660e294d4eb4cf24 228 Gene3D G3DSA:3.40.50.300 1 224 1.2E-66 T 11-10-2018 UP17_23685 3afb50e46735a393660e294d4eb4cf24 228 Pfam PF00005 ABC transporter 19 165 6.3E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_23685 3afb50e46735a393660e294d4eb4cf24 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23685 3afb50e46735a393660e294d4eb4cf24 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 3.5E-87 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 UP17_16705 a9f42eaee2366246be9c9ade0f229fe3 395 Pfam PF06898 Putative stage IV sporulation protein YqfD 7 385 8.4E-120 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD UP17_16705 a9f42eaee2366246be9c9ade0f229fe3 395 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 5 386 5.7E-127 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD UP17_16705 a9f42eaee2366246be9c9ade0f229fe3 395 PIRSF PIRSF029895 1 395 7.4E-156 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD UP17_07900 5188027d9031d9c23db3b2ec362c4655 212 SUPERFAMILY SSF103039 5 208 2.09E-50 T 11-10-2018 IPR028976 CheC-like superfamily UP17_07900 5188027d9031d9c23db3b2ec362c4655 212 Pfam PF04509 CheC-like family 11 44 1.3E-14 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 UP17_07900 5188027d9031d9c23db3b2ec362c4655 212 Pfam PF04509 CheC-like family 112 148 2.2E-9 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 UP17_07900 5188027d9031d9c23db3b2ec362c4655 212 Gene3D G3DSA:3.40.1550.10 5 209 1.6E-57 T 11-10-2018 IPR028976 CheC-like superfamily UP17_00585 fb438a1196eb1b947a3a7dd1fec4973e 216 Gene3D G3DSA:1.10.3130.10 1 66 4.1E-24 T 11-10-2018 UP17_00585 fb438a1196eb1b947a3a7dd1fec4973e 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 2.8E-8 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_00585 fb438a1196eb1b947a3a7dd1fec4973e 216 SUPERFAMILY SSF51161 4 168 2.08E-57 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_00585 fb438a1196eb1b947a3a7dd1fec4973e 216 Gene3D G3DSA:2.160.10.10 67 183 5.0E-37 T 11-10-2018 UP17_00585 fb438a1196eb1b947a3a7dd1fec4973e 216 PIRSF PIRSF000441 1 215 1.8E-83 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 UP17_00585 fb438a1196eb1b947a3a7dd1fec4973e 216 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 UP17_00585 fb438a1196eb1b947a3a7dd1fec4973e 216 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 2.1E-78 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 Gene3D G3DSA:3.40.1020.10 329 422 1.6E-8 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 1.2E-25 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 SUPERFAMILY SSF53686 13 366 4.45E-100 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 15 422 5.3E-194 T 11-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 SUPERFAMILY SSF55021 340 415 4.12E-10 T 11-10-2018 UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 2.9E-78 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 Gene3D G3DSA:3.40.50.1100 25 327 4.4E-117 T 11-10-2018 UP17_14360 222973d3b7bcdcfd3f31fa9c5ca6e1bc 422 Gene3D G3DSA:3.40.50.1100 59 158 4.4E-117 T 11-10-2018 UP17_02620 9e951e14f19835f8e0da081dad1bfefa 297 SUPERFAMILY SSF103481 39 138 3.4E-16 T 11-10-2018 UP17_02620 9e951e14f19835f8e0da081dad1bfefa 297 SUPERFAMILY SSF103481 180 285 8.11E-16 T 11-10-2018 UP17_02620 9e951e14f19835f8e0da081dad1bfefa 297 Pfam PF00892 EamA-like transporter family 146 280 4.6E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_02620 9e951e14f19835f8e0da081dad1bfefa 297 Pfam PF00892 EamA-like transporter family 8 137 5.9E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_00850 35ac38ea515bb47064f125ab2c55e153 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.522 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 UP17_00850 35ac38ea515bb47064f125ab2c55e153 145 PIRSF PIRSF002181 1 143 2.5E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 UP17_00850 35ac38ea515bb47064f125ab2c55e153 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 UP17_00850 35ac38ea515bb47064f125ab2c55e153 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.4E-64 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00850 35ac38ea515bb47064f125ab2c55e153 145 SUPERFAMILY SSF52161 5 143 2.62E-60 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00850 35ac38ea515bb47064f125ab2c55e153 145 Gene3D G3DSA:3.90.1180.10 1 143 2.3E-62 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00850 35ac38ea515bb47064f125ab2c55e153 145 Pfam PF00572 Ribosomal protein L13 15 139 9.7E-57 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 UP17_04855 e0e2d3680c3ceab63586036827a6d19e 538 Gene3D G3DSA:1.10.10.2840 411 537 2.0E-19 T 11-10-2018 UP17_04855 e0e2d3680c3ceab63586036827a6d19e 538 Pfam PF13556 PucR C-terminal helix-turn-helix domain 474 532 3.6E-23 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain UP17_04855 e0e2d3680c3ceab63586036827a6d19e 538 Pfam PF07905 Purine catabolism regulatory protein-like family 5 122 9.0E-32 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain UP17_16080 0cd55e8de99c18aa2c3967d9b4645969 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 8 47 6.0E-11 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UP17_16080 0cd55e8de99c18aa2c3967d9b4645969 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 1.2E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UP17_16080 0cd55e8de99c18aa2c3967d9b4645969 77 SUPERFAMILY SSF116842 3 69 1.96E-20 T 11-10-2018 UP17_16080 0cd55e8de99c18aa2c3967d9b4645969 77 PIRSF PIRSF006488 1 77 1.6E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UP17_16080 0cd55e8de99c18aa2c3967d9b4645969 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 15.14 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UP17_16080 0cd55e8de99c18aa2c3967d9b4645969 77 Gene3D G3DSA:1.10.287.1040 2 77 2.1E-21 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 UP17_16080 0cd55e8de99c18aa2c3967d9b4645969 77 Pfam PF02609 Exonuclease VII small subunit 9 59 1.3E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 UP17_09900 16027b8ee53f52ce5161b69d70db5850 409 Pfam PF01566 Natural resistance-associated macrophage protein 57 377 7.5E-19 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 UP17_02715 07c7bdd0fc0a6446730ed1c3e95b2381 80 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 3 76 5.3E-25 T 11-10-2018 IPR018680 Protein of unknown function DUF2164 UP17_03930 05077b8c21d92a208681904fb1ddae8b 291 ProDom PD128250 YGXA BH0953 1 277 7.0E-98 T 11-10-2018 UP17_03930 05077b8c21d92a208681904fb1ddae8b 291 Pfam PF14540 Nucleotidyltransferase-like 1 118 2.3E-48 T 11-10-2018 IPR029348 Nucleotidyltransferase-like domain UP17_03930 05077b8c21d92a208681904fb1ddae8b 291 Gene3D G3DSA:3.30.460.10 1 114 1.5E-44 T 11-10-2018 UP17_03930 05077b8c21d92a208681904fb1ddae8b 291 Gene3D G3DSA:1.20.120.330 116 232 1.7E-50 T 11-10-2018 UP17_17840 bc4c09321c8bb9b6d13007f7aeb4cb54 147 SUPERFAMILY SSF46785 13 145 1.76E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_17840 bc4c09321c8bb9b6d13007f7aeb4cb54 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 7.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_17840 bc4c09321c8bb9b6d13007f7aeb4cb54 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 7.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_17840 bc4c09321c8bb9b6d13007f7aeb4cb54 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 7.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_17840 bc4c09321c8bb9b6d13007f7aeb4cb54 147 Gene3D G3DSA:1.10.10.10 2 147 1.5E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_17840 bc4c09321c8bb9b6d13007f7aeb4cb54 147 SMART SM00347 30 130 4.7E-25 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_17840 bc4c09321c8bb9b6d13007f7aeb4cb54 147 Pfam PF01047 MarR family 37 95 6.8E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_10990 4eb57ed0ee178b6efb36987484404415 399 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 227 372 1.2E-20 T 11-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 UP17_10990 4eb57ed0ee178b6efb36987484404415 399 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 7 392 3.0E-109 T 11-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 UP17_10990 4eb57ed0ee178b6efb36987484404415 399 SUPERFAMILY SSF53756 2 391 2.42E-80 T 11-10-2018 UP17_10990 4eb57ed0ee178b6efb36987484404415 399 Gene3D G3DSA:3.40.50.2000 213 376 2.7E-117 T 11-10-2018 UP17_10990 4eb57ed0ee178b6efb36987484404415 399 Gene3D G3DSA:3.40.50.2000 5 387 2.7E-117 T 11-10-2018 UP17_01700 c23f1d1061ac37321848f75ad3dd4815 316 Gene3D G3DSA:3.20.20.150 1 240 2.9E-44 T 11-10-2018 UP17_01700 c23f1d1061ac37321848f75ad3dd4815 316 SUPERFAMILY SSF51658 19 240 1.8E-33 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily UP17_01700 c23f1d1061ac37321848f75ad3dd4815 316 Pfam PF01261 Xylose isomerase-like TIM barrel 26 217 3.9E-22 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain UP17_17985 5c739579ecd6c0485356007ba1e0f733 441 Gene3D G3DSA:1.10.1060.10 2 113 2.0E-6 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_17985 5c739579ecd6c0485356007ba1e0f733 441 Pfam PF13183 4Fe-4S dicluster domain 23 92 1.5E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_17985 5c739579ecd6c0485356007ba1e0f733 441 Pfam PF02754 Cysteine-rich domain 198 280 1.0E-20 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_17985 5c739579ecd6c0485356007ba1e0f733 441 Pfam PF02754 Cysteine-rich domain 329 414 1.1E-13 T 11-10-2018 IPR004017 Cysteine-rich domain UP17_17985 5c739579ecd6c0485356007ba1e0f733 441 SUPERFAMILY SSF46548 16 107 5.23E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_17985 5c739579ecd6c0485356007ba1e0f733 441 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_17985 5c739579ecd6c0485356007ba1e0f733 441 PIRSF PIRSF000139 6 441 2.0E-140 T 11-10-2018 UP17_14850 e6d693dce246631fc6d2dc3d95c7a4a4 253 Gene3D G3DSA:3.75.10.10 1 253 5.3E-74 T 11-10-2018 UP17_14850 e6d693dce246631fc6d2dc3d95c7a4a4 253 SUPERFAMILY SSF55909 12 252 1.88E-54 T 11-10-2018 UP17_14850 e6d693dce246631fc6d2dc3d95c7a4a4 253 Pfam PF02274 Amidinotransferase 29 250 1.7E-14 T 11-10-2018 UP17_20885 3830b4fb2f21bf41b1ffb953600760b5 303 Pfam PF00892 EamA-like transporter family 148 283 2.1E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_20885 3830b4fb2f21bf41b1ffb953600760b5 303 Pfam PF00892 EamA-like transporter family 5 134 2.1E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_20885 3830b4fb2f21bf41b1ffb953600760b5 303 SUPERFAMILY SSF103481 42 137 9.02E-13 T 11-10-2018 UP17_05430 ba51999aa0518122c40d722f081797c5 288 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 241 5.5E-16 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_05430 ba51999aa0518122c40d722f081797c5 288 SUPERFAMILY SSF56784 3 273 3.55E-57 T 11-10-2018 IPR036412 HAD-like superfamily UP17_05430 ba51999aa0518122c40d722f081797c5 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 268 4.8E-54 T 11-10-2018 UP17_05430 ba51999aa0518122c40d722f081797c5 288 Gene3D G3DSA:3.40.50.1000 5 265 1.4E-71 T 11-10-2018 IPR023214 HAD superfamily UP17_05430 ba51999aa0518122c40d722f081797c5 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 267 1.5E-43 T 11-10-2018 IPR000150 Cof family GO:0016787 UP17_05430 ba51999aa0518122c40d722f081797c5 288 Gene3D G3DSA:3.30.1240.10 83 196 1.4E-71 T 11-10-2018 UP17_19795 45e14775fc216986589bb20fab8985da 179 SUPERFAMILY SSF109854 7 149 4.4E-19 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_19795 45e14775fc216986589bb20fab8985da 179 Pfam PF07609 Protein of unknown function (DUF1572) 3 164 1.7E-72 T 11-10-2018 IPR011466 Protein of unknown function DUF1572 UP17_19795 45e14775fc216986589bb20fab8985da 179 Gene3D G3DSA:1.20.120.450 8 150 1.4E-14 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_24855 5a53967fad6203481e48162c21e6e834 482 Gene3D G3DSA:3.40.50.300 211 383 1.7E-53 T 11-10-2018 UP17_24855 5a53967fad6203481e48162c21e6e834 482 SUPERFAMILY SSF52540 71 354 8.07E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24855 5a53967fad6203481e48162c21e6e834 482 Pfam PF00271 Helicase conserved C-terminal domain 232 337 1.5E-31 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_24855 5a53967fad6203481e48162c21e6e834 482 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 480 75.827 T 11-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 UP17_24855 5a53967fad6203481e48162c21e6e834 482 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site UP17_24855 5a53967fad6203481e48162c21e6e834 482 SMART SM00487 23 220 7.6E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_24855 5a53967fad6203481e48162c21e6e834 482 Pfam PF03880 DbpA RNA binding domain 407 477 1.6E-19 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain UP17_24855 5a53967fad6203481e48162c21e6e834 482 Gene3D G3DSA:3.40.50.300 4 209 2.2E-73 T 11-10-2018 UP17_24855 5a53967fad6203481e48162c21e6e834 482 Gene3D G3DSA:3.30.70.330 406 481 3.4E-28 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily UP17_24855 5a53967fad6203481e48162c21e6e834 482 SMART SM00490 256 337 1.2E-35 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_24855 5a53967fad6203481e48162c21e6e834 482 Pfam PF00270 DEAD/DEAH box helicase 28 194 7.2E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_22485 f650df50a3b26845b11c8f3166060da1 133 SMART SM00317 2 117 3.6E-6 T 11-10-2018 IPR001214 SET domain GO:0005515 UP17_22485 f650df50a3b26845b11c8f3166060da1 133 Pfam PF00856 SET domain 59 111 3.3E-10 T 11-10-2018 IPR001214 SET domain GO:0005515 UP17_22485 f650df50a3b26845b11c8f3166060da1 133 SUPERFAMILY SSF82199 12 113 7.59E-23 T 11-10-2018 UP17_22485 f650df50a3b26845b11c8f3166060da1 133 PIRSF PIRSF022536 1 131 8.2E-31 T 11-10-2018 IPR009207 Histone methyltransferase, PBCV type putative KEGG: 00310+2.1.1.43 UP17_22485 f650df50a3b26845b11c8f3166060da1 133 Gene3D G3DSA:2.170.270.10 1 114 2.4E-28 T 11-10-2018 UP17_07255 3427f22ea5c89c8b46f8ee30ace0e8f1 294 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 174 290 1.4E-25 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain UP17_07255 3427f22ea5c89c8b46f8ee30ace0e8f1 294 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 147 4.2E-21 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain UP17_07255 3427f22ea5c89c8b46f8ee30ace0e8f1 294 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 2.3E-60 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 UP17_07255 3427f22ea5c89c8b46f8ee30ace0e8f1 294 Gene3D G3DSA:1.10.1040.10 170 293 1.8E-39 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 UP17_07255 3427f22ea5c89c8b46f8ee30ace0e8f1 294 SUPERFAMILY SSF51735 1 162 1.26E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_07255 3427f22ea5c89c8b46f8ee30ace0e8f1 294 SUPERFAMILY SSF48179 170 290 2.28E-21 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 UP17_07255 3427f22ea5c89c8b46f8ee30ace0e8f1 294 Gene3D G3DSA:3.40.50.720 1 169 7.7E-50 T 11-10-2018 UP17_09985 98bc3da4ac7ec6da5e957ff99e2d1e92 340 SUPERFAMILY SSF51735 10 141 3.94E-8 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_09985 98bc3da4ac7ec6da5e957ff99e2d1e92 340 Gene3D G3DSA:3.40.50.720 6 166 1.9E-13 T 11-10-2018 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 41.522 T 11-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 PIRSF PIRSF000164 1 303 1.2E-86 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 Pfam PF01180 Dihydroorotate dehydrogenase 4 286 2.6E-92 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 SUPERFAMILY SSF51395 1 301 1.23E-90 T 11-10-2018 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 302 8.6E-122 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 UP17_07455 e2c18eec8b588e7771a56d7d34ef71cf 313 Gene3D G3DSA:3.20.20.70 1 304 9.9E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_17425 042535d55651c5899247cca71a6065e1 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 58.036 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 UP17_17425 042535d55651c5899247cca71a6065e1 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 372 1.6E-175 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 UP17_17425 042535d55651c5899247cca71a6065e1 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 373 1.0E-185 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 UP17_17425 042535d55651c5899247cca71a6065e1 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 365 2.2E-92 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 UP17_17425 042535d55651c5899247cca71a6065e1 379 Gene3D G3DSA:3.20.20.105 2 373 3.4E-172 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 UP17_17425 042535d55651c5899247cca71a6065e1 379 SUPERFAMILY SSF51713 3 369 4.05E-163 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 UP17_12585 7afb181e43292e9d925d9cdf96c0cb4c 462 Gene3D G3DSA:3.50.30.30 99 224 2.2E-119 T 11-10-2018 UP17_12585 7afb181e43292e9d925d9cdf96c0cb4c 462 Gene3D G3DSA:3.40.630.10 61 426 2.2E-119 T 11-10-2018 UP17_12585 7afb181e43292e9d925d9cdf96c0cb4c 462 Pfam PF04389 Peptidase family M28 234 429 1.5E-40 T 11-10-2018 IPR007484 Peptidase M28 UP17_12585 7afb181e43292e9d925d9cdf96c0cb4c 462 Pfam PF02225 PA domain 125 207 3.0E-16 T 11-10-2018 IPR003137 PA domain UP17_12585 7afb181e43292e9d925d9cdf96c0cb4c 462 SUPERFAMILY SSF52025 116 216 6.8E-18 T 11-10-2018 UP17_12585 7afb181e43292e9d925d9cdf96c0cb4c 462 SUPERFAMILY SSF53187 41 436 4.38E-61 T 11-10-2018 UP17_19805 92860b978957677345beff3a6cf002aa 149 SUPERFAMILY SSF55729 5 132 2.3E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_19805 92860b978957677345beff3a6cf002aa 149 Pfam PF13673 Acetyltransferase (GNAT) domain 45 145 1.5E-14 T 11-10-2018 IPR000182 GNAT domain UP17_19805 92860b978957677345beff3a6cf002aa 149 Gene3D G3DSA:3.40.630.30 5 145 1.7E-22 T 11-10-2018 UP17_02835 265672845a5a7036f7df734767231769 467 PIRSF PIRSF006060 1 464 2.0E-66 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_02835 265672845a5a7036f7df734767231769 467 Gene3D G3DSA:1.20.1740.10 5 460 7.5E-60 T 11-10-2018 UP17_02835 265672845a5a7036f7df734767231769 467 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_02835 265672845a5a7036f7df734767231769 467 Pfam PF00324 Amino acid permease 14 424 8.2E-104 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_19575 15470c4a9febc5d94ca7eafcae3ac627 298 SUPERFAMILY SSF46689 3 66 2.05E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19575 15470c4a9febc5d94ca7eafcae3ac627 298 Gene3D G3DSA:1.10.357.10 1 169 3.3E-28 T 11-10-2018 UP17_19575 15470c4a9febc5d94ca7eafcae3ac627 298 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site UP17_19575 15470c4a9febc5d94ca7eafcae3ac627 298 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 1.8E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_19575 15470c4a9febc5d94ca7eafcae3ac627 298 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_19575 15470c4a9febc5d94ca7eafcae3ac627 298 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_25655 923509b08e8609a9ae634f2459868f64 524 SUPERFAMILY SSF52540 19 425 1.73E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_25655 923509b08e8609a9ae634f2459868f64 524 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 29 432 2.0E-116 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 UP17_25655 923509b08e8609a9ae634f2459868f64 524 Gene3D G3DSA:3.40.50.300 207 437 1.4E-50 T 11-10-2018 UP17_23155 53f5492f960e099e47c0c70b278d3af8 222 SUPERFAMILY SSF161098 11 209 7.46E-46 T 11-10-2018 IPR035906 MetI-like superfamily UP17_23155 53f5492f960e099e47c0c70b278d3af8 222 Gene3D G3DSA:1.10.3720.10 10 222 7.2E-47 T 11-10-2018 IPR035906 MetI-like superfamily UP17_23155 53f5492f960e099e47c0c70b278d3af8 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 221 2.6E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 Pfam PF04509 CheC-like family 38 74 3.0E-16 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 Pfam PF04509 CheC-like family 135 170 5.0E-15 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 SUPERFAMILY SSF103039 33 223 2.29E-49 T 11-10-2018 IPR028976 CheC-like superfamily UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 322 397 1.7E-32 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 325 395 3.1E-25 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 Gene3D G3DSA:2.30.330.10 313 405 2.3E-36 T 11-10-2018 IPR036429 SpoA-like superfamily UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 SUPERFAMILY SSF101801 322 403 5.23E-25 T 11-10-2018 IPR036429 SpoA-like superfamily UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 PRINTS PR00956 Flagellar motor switch protein FliN signature 325 341 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 PRINTS PR00956 Flagellar motor switch protein FliN signature 358 371 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 PRINTS PR00956 Flagellar motor switch protein FliN signature 371 386 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 PRINTS PR00956 Flagellar motor switch protein FliN signature 342 358 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 UP17_07835 f013b62b45e0c02ae15f2ae32a452197 405 Gene3D G3DSA:3.40.1550.10 33 228 2.0E-52 T 11-10-2018 IPR028976 CheC-like superfamily UP17_06455 ca7fa0e312271140d5cf1616d5c698ff 62 Pfam PF13076 Fur-regulated basic protein A 11 46 1.4E-10 T 11-10-2018 IPR025072 Fur-regulated basic protein A UP17_14185 398910e57e433cbba16ed50bea4bcef4 348 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 10 336 7.0E-138 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 UP17_14185 398910e57e433cbba16ed50bea4bcef4 348 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 347 38.823 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 UP17_14185 398910e57e433cbba16ed50bea4bcef4 348 Gene3D G3DSA:1.20.120.420 2 148 1.3E-47 T 11-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 UP17_14185 398910e57e433cbba16ed50bea4bcef4 348 Pfam PF01008 Initiation factor 2 subunit family 49 336 1.1E-84 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 UP17_14185 398910e57e433cbba16ed50bea4bcef4 348 Gene3D G3DSA:3.40.50.10470 149 348 1.3E-66 T 11-10-2018 UP17_14185 398910e57e433cbba16ed50bea4bcef4 348 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 36 336 3.9E-124 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 UP17_14185 398910e57e433cbba16ed50bea4bcef4 348 SUPERFAMILY SSF100950 4 342 9.21E-114 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_00535 8928ad9e47adaaa5bc36591a97ed51c4 183 PIRSF PIRSF015034 1 181 1.6E-67 T 11-10-2018 IPR025542 YacH protein UP17_00535 8928ad9e47adaaa5bc36591a97ed51c4 183 Pfam PF02151 UvrB/uvrC motif 139 172 1.0E-5 T 11-10-2018 IPR001943 UVR domain GO:0005515 UP17_00535 8928ad9e47adaaa5bc36591a97ed51c4 183 SUPERFAMILY SSF46600 139 177 2.62E-5 T 11-10-2018 IPR036876 UVR domain superfamily UP17_25785 965e132c521399982e7ba5919c91b143 719 SUPERFAMILY SSF56003 115 711 2.49E-139 T 11-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 UP17_25785 965e132c521399982e7ba5919c91b143 719 Gene3D G3DSA:3.30.365.10 2 716 1.2E-178 T 11-10-2018 UP17_25785 965e132c521399982e7ba5919c91b143 719 SUPERFAMILY SSF54665 5 137 1.28E-23 T 11-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily UP17_25785 965e132c521399982e7ba5919c91b143 719 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 20 122 1.8E-8 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead UP17_25785 965e132c521399982e7ba5919c91b143 719 SMART SM01008 20 123 1.6E-16 T 11-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead UP17_25785 965e132c521399982e7ba5919c91b143 719 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 651 4.0E-123 T 11-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 UP17_18675 a3e9dfecafd61c9c299da7dbbd2912ba 185 Gene3D G3DSA:2.40.100.20 69 184 5.4E-19 T 11-10-2018 UP17_18675 a3e9dfecafd61c9c299da7dbbd2912ba 185 Pfam PF04126 Cyclophilin-like 70 182 9.2E-8 T 11-10-2018 IPR025658 Cyclophilin TM1367-like domain UP17_18675 a3e9dfecafd61c9c299da7dbbd2912ba 185 SUPERFAMILY SSF50891 70 183 4.17E-30 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_22860 00fd4c3b1d0c4c9ce4570b63f17cfdb7 128 Pfam PF08810 Kinase associated protein B 16 127 8.0E-49 T 11-10-2018 IPR014916 Kinase associated protein B UP17_22860 00fd4c3b1d0c4c9ce4570b63f17cfdb7 128 SUPERFAMILY SSF141251 5 127 6.67E-51 T 11-10-2018 IPR038080 Kinase associated protein B superfamily UP17_22860 00fd4c3b1d0c4c9ce4570b63f17cfdb7 128 SMART SM01298 16 128 5.5E-68 T 11-10-2018 IPR014916 Kinase associated protein B UP17_22860 00fd4c3b1d0c4c9ce4570b63f17cfdb7 128 Gene3D G3DSA:2.30.30.430 1 127 5.9E-54 T 11-10-2018 IPR038080 Kinase associated protein B superfamily UP17_01670 f2f020347a69f29503a853a01c7f0328 86 Gene3D G3DSA:1.10.1660.10 11 82 8.6E-12 T 11-10-2018 UP17_01670 f2f020347a69f29503a853a01c7f0328 86 SUPERFAMILY SSF46955 17 83 2.56E-8 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_01670 f2f020347a69f29503a853a01c7f0328 86 Pfam PF13411 MerR HTH family regulatory protein 17 85 1.1E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_25570 831d91768fc625752f3bebbdfcd6c8e0 91 Gene3D G3DSA:1.10.10.60 11 90 2.9E-8 T 11-10-2018 UP17_25570 831d91768fc625752f3bebbdfcd6c8e0 91 SUPERFAMILY SSF46689 7 90 2.33E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_25570 831d91768fc625752f3bebbdfcd6c8e0 91 Pfam PF01527 Transposase 8 78 7.0E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_25140 f76054c852c0a222560f634dbbbb5216 279 Gene3D G3DSA:3.60.15.10 1 275 3.7E-71 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_25140 f76054c852c0a222560f634dbbbb5216 279 SUPERFAMILY SSF56281 9 273 4.72E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_25140 f76054c852c0a222560f634dbbbb5216 279 Pfam PF00753 Metallo-beta-lactamase superfamily 21 80 3.3E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_05215 fed8003819fc8d669164b8c22434e69e 327 SUPERFAMILY SSF52518 4 194 7.85E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_05215 fed8003819fc8d669164b8c22434e69e 327 Gene3D G3DSA:3.40.50.920 194 326 4.9E-48 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_05215 fed8003819fc8d669164b8c22434e69e 327 SMART SM00861 5 180 2.7E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_05215 fed8003819fc8d669164b8c22434e69e 327 Pfam PF02780 Transketolase, C-terminal domain 195 317 3.3E-39 T 11-10-2018 IPR033248 Transketolase, C-terminal domain UP17_05215 fed8003819fc8d669164b8c22434e69e 327 SUPERFAMILY SSF52922 190 326 1.96E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_05215 fed8003819fc8d669164b8c22434e69e 327 Gene3D G3DSA:3.40.50.970 3 193 3.1E-84 T 11-10-2018 UP17_05215 fed8003819fc8d669164b8c22434e69e 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 2.8E-49 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_05505 84cf52adb8a0c2c441175f6abb22071a 1006 SUPERFAMILY SSF52540 2 989 6.76E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05505 84cf52adb8a0c2c441175f6abb22071a 1006 Pfam PF13514 AAA domain 3 204 4.0E-21 T 11-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain UP17_05505 84cf52adb8a0c2c441175f6abb22071a 1006 Gene3D G3DSA:3.40.50.300 1 279 2.7E-17 T 11-10-2018 UP17_05505 84cf52adb8a0c2c441175f6abb22071a 1006 Gene3D G3DSA:3.40.50.300 758 992 3.5E-19 T 11-10-2018 UP17_07560 6a81acf7ab953ff99fa86218f968c039 62 Gene3D G3DSA:2.30.170.40 19 62 1.6E-18 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07560 6a81acf7ab953ff99fa86218f968c039 62 SUPERFAMILY SSF143800 1 60 1.96E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07560 6a81acf7ab953ff99fa86218f968c039 62 Pfam PF00830 Ribosomal L28 family 3 58 1.8E-20 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07560 6a81acf7ab953ff99fa86218f968c039 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 5.2E-23 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07560 6a81acf7ab953ff99fa86218f968c039 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.874 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_21390 8eda4a7b9f6930d0751c3f66e9773abc 160 Pfam PF12867 DinB superfamily 27 146 5.9E-11 T 11-10-2018 IPR024775 DinB-like domain UP17_21390 8eda4a7b9f6930d0751c3f66e9773abc 160 SUPERFAMILY SSF109854 23 154 1.03E-18 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_21390 8eda4a7b9f6930d0751c3f66e9773abc 160 Gene3D G3DSA:1.20.120.450 21 153 1.0E-17 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_01685 733312f37c510238ffc6fe53b21bd6bf 225 Pfam PF13309 HTH domain 162 222 9.8E-23 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain UP17_01685 733312f37c510238ffc6fe53b21bd6bf 225 Pfam PF08348 YheO-like PAS domain 9 122 4.0E-45 T 11-10-2018 IPR013559 YheO-like UP17_01685 733312f37c510238ffc6fe53b21bd6bf 225 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 128 9.0E-32 T 11-10-2018 IPR013559 YheO-like UP17_12705 136a4e1514754c9566807239e9139e8c 334 PRINTS PR01713 Nucleotide sugar epimerase signature 295 312 1.9E-31 T 11-10-2018 UP17_12705 136a4e1514754c9566807239e9139e8c 334 PRINTS PR01713 Nucleotide sugar epimerase signature 216 231 1.9E-31 T 11-10-2018 UP17_12705 136a4e1514754c9566807239e9139e8c 334 PRINTS PR01713 Nucleotide sugar epimerase signature 256 271 1.9E-31 T 11-10-2018 UP17_12705 136a4e1514754c9566807239e9139e8c 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.9E-31 T 11-10-2018 UP17_12705 136a4e1514754c9566807239e9139e8c 334 Gene3D G3DSA:3.90.25.10 180 328 1.6E-101 T 11-10-2018 UP17_12705 136a4e1514754c9566807239e9139e8c 334 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 240 1.4E-57 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 UP17_12705 136a4e1514754c9566807239e9139e8c 334 Gene3D G3DSA:3.40.50.720 4 316 1.6E-101 T 11-10-2018 UP17_12705 136a4e1514754c9566807239e9139e8c 334 SUPERFAMILY SSF51735 1 331 4.15E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_21490 1c74720c26ab2af98303f800e084237b 233 SMART SM00866 88 227 2.5E-28 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_21490 1c74720c26ab2af98303f800e084237b 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.6E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21490 1c74720c26ab2af98303f800e084237b 233 Gene3D G3DSA:3.40.1410.10 75 228 2.0E-36 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_21490 1c74720c26ab2af98303f800e084237b 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 9.4E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21490 1c74720c26ab2af98303f800e084237b 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 9.4E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21490 1c74720c26ab2af98303f800e084237b 233 SUPERFAMILY SSF46785 4 71 4.87E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_21490 1c74720c26ab2af98303f800e084237b 233 SUPERFAMILY SSF64288 77 227 3.61E-37 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily UP17_21490 1c74720c26ab2af98303f800e084237b 233 Pfam PF07702 UTRA domain 91 222 5.8E-31 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 UP17_21490 1c74720c26ab2af98303f800e084237b 233 SMART SM00345 8 67 9.3E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21490 1c74720c26ab2af98303f800e084237b 233 Gene3D G3DSA:1.10.10.10 2 69 6.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01390 7aa09d1df0691dec386c5360fd7886e6 275 Gene3D G3DSA:1.10.490.10 1 137 3.5E-30 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 UP17_01390 7aa09d1df0691dec386c5360fd7886e6 275 Pfam PF01740 STAS domain 155 255 4.9E-14 T 11-10-2018 IPR002645 STAS domain UP17_01390 7aa09d1df0691dec386c5360fd7886e6 275 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 6 136 3.0E-20 T 11-10-2018 UP17_01390 7aa09d1df0691dec386c5360fd7886e6 275 Gene3D G3DSA:3.30.750.24 149 269 3.2E-39 T 11-10-2018 IPR036513 STAS domain superfamily UP17_01390 7aa09d1df0691dec386c5360fd7886e6 275 Pfam PF08678 Rsbr N terminal 9 137 1.2E-37 T 11-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain UP17_01390 7aa09d1df0691dec386c5360fd7886e6 275 SUPERFAMILY SSF52091 151 245 1.55E-16 T 11-10-2018 IPR036513 STAS domain superfamily UP17_24455 ee25e97783ac439f6404ff95f4b6ffa5 115 Pfam PF11181 Heat induced stress protein YflT 4 103 2.3E-29 T 11-10-2018 IPR025889 General stress protein 17M-like domain UP17_13540 ff3d4370505b9342da9836224d3d4407 278 Pfam PF00753 Metallo-beta-lactamase superfamily 33 245 2.4E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_13540 ff3d4370505b9342da9836224d3d4407 278 SUPERFAMILY SSF56281 19 252 1.7E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_13540 ff3d4370505b9342da9836224d3d4407 278 SMART SM00849 35 245 1.4E-32 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_13540 ff3d4370505b9342da9836224d3d4407 278 Gene3D G3DSA:3.60.15.10 15 270 1.4E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_24290 41e5142a4a3e6e895f0dd0aedc294ad5 123 Pfam PF00072 Response regulator receiver domain 5 115 1.1E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_24290 41e5142a4a3e6e895f0dd0aedc294ad5 123 SMART SM00448 3 114 8.2E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_24290 41e5142a4a3e6e895f0dd0aedc294ad5 123 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-43 T 11-10-2018 UP17_24290 41e5142a4a3e6e895f0dd0aedc294ad5 123 SUPERFAMILY SSF52172 4 119 1.22E-38 T 11-10-2018 IPR011006 CheY-like superfamily UP17_08385 48642d55845dbcb9ce7abb4a79de850c 133 Gene3D G3DSA:1.10.1660.10 3 85 8.2E-26 T 11-10-2018 UP17_08385 48642d55845dbcb9ce7abb4a79de850c 133 SUPERFAMILY SSF46955 13 110 5.04E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_08385 48642d55845dbcb9ce7abb4a79de850c 133 SMART SM00422 13 81 4.1E-27 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_08385 48642d55845dbcb9ce7abb4a79de850c 133 Pfam PF13411 MerR HTH family regulatory protein 13 78 7.4E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_08385 48642d55845dbcb9ce7abb4a79de850c 133 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_18110 253cd316c72a6b766e91961eead332c7 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 1.9E-61 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 UP17_18110 253cd316c72a6b766e91961eead332c7 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 27.63 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 UP17_18110 253cd316c72a6b766e91961eead332c7 199 Pfam PF01121 Dephospho-CoA kinase 4 183 3.2E-61 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 UP17_18110 253cd316c72a6b766e91961eead332c7 199 Gene3D G3DSA:3.40.50.300 2 198 1.5E-74 T 11-10-2018 UP17_18110 253cd316c72a6b766e91961eead332c7 199 SUPERFAMILY SSF52540 1 194 1.52E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_10770 c8ec77aa07122b5858b2b81df2f0da42 210 Pfam PF04647 Accessory gene regulator B 15 184 1.4E-27 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 UP17_10770 c8ec77aa07122b5858b2b81df2f0da42 210 SMART SM00793 9 195 8.7E-6 T 11-10-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 UP17_18175 93955b3c441b7405614d43c9e0937d4d 427 PIRSF PIRSF001362 1 426 6.8E-238 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 UP17_18175 93955b3c441b7405614d43c9e0937d4d 427 SUPERFAMILY SSF51621 4 423 4.93E-154 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 UP17_18175 93955b3c441b7405614d43c9e0937d4d 427 Gene3D G3DSA:3.20.20.60 2 406 3.2E-170 T 11-10-2018 UP17_18175 93955b3c441b7405614d43c9e0937d4d 427 ProSitePatterns PS00161 Isocitrate lyase signature. 184 189 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 UP17_18175 93955b3c441b7405614d43c9e0937d4d 427 Pfam PF00463 Isocitrate lyase family 11 250 1.7E-57 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 UP17_18175 93955b3c441b7405614d43c9e0937d4d 427 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 248 1.7E-106 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 UP17_24050 11accc826d42b513e29821b5ac062efe 90 Gene3D G3DSA:1.10.10.60 1 90 1.2E-41 T 11-10-2018 UP17_24050 11accc826d42b513e29821b5ac062efe 90 Pfam PF12116 Stage III sporulation protein D 2 81 1.8E-40 T 11-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID UP17_24050 11accc826d42b513e29821b5ac062efe 90 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 80 8.0E-46 T 11-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID UP17_24050 11accc826d42b513e29821b5ac062efe 90 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 UP17_09375 71bc958c2f64d7b766d6764ba8023b91 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 214 1.5E-64 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 UP17_15955 9dcc852c358fe97d6dff56f6f9cecc95 240 Gene3D G3DSA:3.40.50.300 1 240 1.2E-80 T 11-10-2018 UP17_15955 9dcc852c358fe97d6dff56f6f9cecc95 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_15955 9dcc852c358fe97d6dff56f6f9cecc95 240 SUPERFAMILY SSF52540 1 235 2.54E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15955 9dcc852c358fe97d6dff56f6f9cecc95 240 Pfam PF00005 ABC transporter 17 165 2.4E-38 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_15955 9dcc852c358fe97d6dff56f6f9cecc95 240 SMART SM00382 26 213 1.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_15955 9dcc852c358fe97d6dff56f6f9cecc95 240 PIRSF PIRSF039085 1 240 7.8E-116 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 UP17_01290 2e0d597353525b167a83e54524355c10 279 SUPERFAMILY SSF56349 14 272 3.53E-44 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_01290 2e0d597353525b167a83e54524355c10 279 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 13 84 4.8E-11 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 UP17_01290 2e0d597353525b167a83e54524355c10 279 Pfam PF00589 Phage integrase family 113 263 3.5E-29 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_01290 2e0d597353525b167a83e54524355c10 279 Gene3D G3DSA:1.10.443.10 100 278 1.8E-41 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_01290 2e0d597353525b167a83e54524355c10 279 Gene3D G3DSA:1.10.150.130 2 95 3.2E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 Pfam PF00571 CBS domain 98 144 5.1E-7 T 11-10-2018 IPR000644 CBS domain UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 Pfam PF00571 CBS domain 155 204 1.2E-6 T 11-10-2018 IPR000644 CBS domain UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 SMART SM01240 9 474 0.0 T 11-10-2018 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 SMART SM00116 161 209 5.4E-8 T 11-10-2018 IPR000644 CBS domain UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 SMART SM00116 98 148 7.5E-8 T 11-10-2018 IPR000644 CBS domain UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 PIRSF PIRSF000130 1 487 1.3E-209 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 84.196 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 Gene3D G3DSA:3.20.20.70 1 487 1.6E-224 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 SUPERFAMILY SSF54631 66 208 1.07E-30 T 11-10-2018 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 2.8E-164 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 3.2E-199 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 UP17_00070 04cdc367b9fe28c341c0b7169812141c 487 SUPERFAMILY SSF51412 5 478 1.83E-125 T 11-10-2018 UP17_12615 3fbb780551aabc8e456a5778dc0dcfe8 203 SMART SM00014 57 164 1.7E-15 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_12615 3fbb780551aabc8e456a5778dc0dcfe8 203 SUPERFAMILY SSF48317 10 165 2.09E-34 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily UP17_12615 3fbb780551aabc8e456a5778dc0dcfe8 203 Pfam PF01569 PAP2 superfamily 57 168 8.6E-19 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_12615 3fbb780551aabc8e456a5778dc0dcfe8 203 Gene3D G3DSA:1.20.144.10 85 176 1.3E-16 T 11-10-2018 UP17_16270 c8b3924676817158f533639ed3147923 344 PRINTS PR00812 Bacterial general secretion pathway protein F signature 309 323 2.2E-8 T 11-10-2018 IPR003004 GspF/PilC family UP17_16270 c8b3924676817158f533639ed3147923 344 PRINTS PR00812 Bacterial general secretion pathway protein F signature 325 344 2.2E-8 T 11-10-2018 IPR003004 GspF/PilC family UP17_16270 c8b3924676817158f533639ed3147923 344 PRINTS PR00812 Bacterial general secretion pathway protein F signature 107 135 2.2E-8 T 11-10-2018 IPR003004 GspF/PilC family UP17_16270 c8b3924676817158f533639ed3147923 344 Pfam PF00482 Type II secretion system (T2SS), protein F 15 135 1.4E-16 T 11-10-2018 IPR018076 Type II secretion system F domain UP17_16270 c8b3924676817158f533639ed3147923 344 Pfam PF00482 Type II secretion system (T2SS), protein F 214 336 2.6E-18 T 11-10-2018 IPR018076 Type II secretion system F domain UP17_16270 c8b3924676817158f533639ed3147923 344 Gene3D G3DSA:1.20.81.30 198 309 6.3E-14 T 11-10-2018 UP17_16270 c8b3924676817158f533639ed3147923 344 Gene3D G3DSA:1.20.81.30 1 112 1.0E-15 T 11-10-2018 UP17_06325 399290deb8493cd021043c44336ffd95 453 Pfam PF00324 Amino acid permease 19 427 2.4E-90 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_06325 399290deb8493cd021043c44336ffd95 453 PIRSF PIRSF006060 1 453 4.8E-70 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_06325 399290deb8493cd021043c44336ffd95 453 Gene3D G3DSA:1.20.1740.10 8 453 2.7E-63 T 11-10-2018 UP17_06325 399290deb8493cd021043c44336ffd95 453 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 Pfam PF00072 Response regulator receiver domain 5 114 1.6E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 SMART SM01012 130 185 7.9E-23 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 Pfam PF03861 ANTAR domain 132 185 1.2E-19 T 11-10-2018 IPR005561 ANTAR domain GO:0003723 UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 Gene3D G3DSA:3.40.50.2300 2 130 2.7E-34 T 11-10-2018 UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 SUPERFAMILY SSF52172 4 185 2.85E-53 T 11-10-2018 IPR011006 CheY-like superfamily UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 Gene3D G3DSA:1.10.10.10 132 192 3.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 SMART SM00448 3 114 1.3E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_21895 c9e927351fc5713e66effc2fcbb43d13 194 PIRSF PIRSF036382 2 191 3.1E-58 T 11-10-2018 IPR008327 Signal transduction response regulator, antiterminator UP17_00885 fb2d275eaaa6a1c000d83119c34e040b 226 PIRSF PIRSF029886 1 198 7.7E-75 T 11-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 UP17_00885 fb2d275eaaa6a1c000d83119c34e040b 226 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 194 4.4E-74 T 11-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 UP17_00885 fb2d275eaaa6a1c000d83119c34e040b 226 SMART SM01251 17 195 2.0E-98 T 11-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 UP17_09085 8fa5b469b8d9a59c73054da6833cdfe3 75 Gene3D G3DSA:3.30.460.10 1 72 1.4E-11 T 11-10-2018 UP17_09085 8fa5b469b8d9a59c73054da6833cdfe3 75 SUPERFAMILY SSF81301 2 40 2.32E-8 T 11-10-2018 UP17_09085 8fa5b469b8d9a59c73054da6833cdfe3 75 Pfam PF01909 Nucleotidyltransferase domain 2 43 9.5E-7 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 UP17_07195 371522ad496cf55ca56ebf9ac248f6bd 191 Gene3D G3DSA:3.40.50.150 1 182 1.7E-58 T 11-10-2018 UP17_07195 371522ad496cf55ca56ebf9ac248f6bd 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 5.7E-59 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 UP17_07195 371522ad496cf55ca56ebf9ac248f6bd 191 PIRSF PIRSF004553 1 184 8.2E-52 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 UP17_07195 371522ad496cf55ca56ebf9ac248f6bd 191 Pfam PF03602 Conserved hypothetical protein 95 1 181 3.9E-59 T 11-10-2018 UP17_07195 371522ad496cf55ca56ebf9ac248f6bd 191 SUPERFAMILY SSF53335 1 181 3.04E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_01760 f44a072c73a7973d7593c657056f94f1 496 Pfam PF00324 Amino acid permease 29 478 7.1E-136 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_01760 f44a072c73a7973d7593c657056f94f1 496 ProSitePatterns PS00218 Amino acid permeases signature. 54 85 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_01760 f44a072c73a7973d7593c657056f94f1 496 Gene3D G3DSA:1.20.1740.10 19 484 3.9E-60 T 11-10-2018 UP17_01760 f44a072c73a7973d7593c657056f94f1 496 PIRSF PIRSF006060 10 484 3.8E-83 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 279 5.5E-67 T 11-10-2018 UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 11-10-2018 UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 252 2.2E-23 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 ProSitePatterns PS01229 Hypothetical cof family signature 2. 233 255 - T 11-10-2018 UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 Gene3D G3DSA:3.30.1240.10 81 208 5.0E-87 T 11-10-2018 UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 Gene3D G3DSA:3.40.50.1000 4 276 5.0E-87 T 11-10-2018 IPR023214 HAD superfamily UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 279 5.0E-62 T 11-10-2018 IPR000150 Cof family GO:0016787 UP17_10325 2f34598f24f0344544bfcb5bcdbe3288 290 SUPERFAMILY SSF56784 3 283 2.18E-66 T 11-10-2018 IPR036412 HAD-like superfamily UP17_18910 b15cfa00b8d71da343e405394b80f8b3 242 Gene3D G3DSA:3.20.20.70 4 197 1.0E-29 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_18910 b15cfa00b8d71da343e405394b80f8b3 242 PIRSF PIRSF000370 2 242 6.4E-53 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 UP17_18910 b15cfa00b8d71da343e405394b80f8b3 242 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 242 5.1E-117 T 11-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 UP17_18910 b15cfa00b8d71da343e405394b80f8b3 242 Pfam PF04055 Radical SAM superfamily 28 124 1.2E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_18910 b15cfa00b8d71da343e405394b80f8b3 242 Pfam PF13394 4Fe-4S single cluster domain 26 111 2.8E-11 T 11-10-2018 UP17_18910 b15cfa00b8d71da343e405394b80f8b3 242 SUPERFAMILY SSF102114 26 173 1.2E-14 T 11-10-2018 UP17_18910 b15cfa00b8d71da343e405394b80f8b3 242 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 239 36.333 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 UP17_17325 5970ebedfa5ab6b51ceead4654f2465b 395 Gene3D G3DSA:3.40.50.2300 164 294 1.3E-109 T 11-10-2018 UP17_17325 5970ebedfa5ab6b51ceead4654f2465b 395 SUPERFAMILY SSF53822 41 388 3.33E-97 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_17325 5970ebedfa5ab6b51ceead4654f2465b 395 Pfam PF13458 Periplasmic binding protein 42 386 1.7E-68 T 11-10-2018 IPR028081 Leucine-binding protein domain UP17_17325 5970ebedfa5ab6b51ceead4654f2465b 395 Gene3D G3DSA:3.40.50.2300 44 369 1.3E-109 T 11-10-2018 UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.0E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_18680 b411a53ed09634feb5780993f54ea970 248 SUPERFAMILY SSF51735 1 232 9.4E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.4E-24 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_18680 b411a53ed09634feb5780993f54ea970 248 Gene3D G3DSA:3.40.50.720 1 248 1.5E-68 T 11-10-2018 UP17_18680 b411a53ed09634feb5780993f54ea970 248 Pfam PF00106 short chain dehydrogenase 7 196 1.9E-57 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_17755 24f15ac6de30e96f1390434d9694afcb 77 Pfam PF13751 Transposase DDE domain 3 55 6.3E-11 T 11-10-2018 IPR025668 Transposase DDE domain UP17_12020 a08737eec29f93462cd7eafa7117a3db 280 Gene3D G3DSA:3.30.465.10 4 172 1.7E-30 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 UP17_12020 a08737eec29f93462cd7eafa7117a3db 280 SUPERFAMILY SSF56176 1 167 4.91E-33 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_12020 a08737eec29f93462cd7eafa7117a3db 280 SUPERFAMILY SSF55447 179 271 2.55E-8 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily UP17_12020 a08737eec29f93462cd7eafa7117a3db 280 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 167 3.2E-26 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 UP17_22745 55f1aa9a9e380d877b439cc735521ced 275 Pfam PF02673 Bacitracin resistance protein BacA 9 269 9.8E-81 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UP17_22745 55f1aa9a9e380d877b439cc735521ced 275 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 274 17.561 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UP17_22745 55f1aa9a9e380d877b439cc735521ced 275 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 267 3.1E-89 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UP17_15625 2a443b2abaf4f0b753e2c8b4eeadc9fc 392 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 49 392 6.6E-77 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 UP17_15625 2a443b2abaf4f0b753e2c8b4eeadc9fc 392 Pfam PF01578 Cytochrome C assembly protein 73 389 9.9E-36 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 UP17_22700 944a2211d3708fa5780cea183dbe8f03 207 Gene3D G3DSA:1.20.140.160 83 195 1.8E-11 T 11-10-2018 UP17_22700 944a2211d3708fa5780cea183dbe8f03 207 Pfam PF04545 Sigma-70, region 4 142 191 8.1E-10 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 UP17_22700 944a2211d3708fa5780cea183dbe8f03 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 65 192 2.3E-12 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_22700 944a2211d3708fa5780cea183dbe8f03 207 SUPERFAMILY SSF88659 132 198 2.24E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_05545 74cdd67de579f6a7231322265326cbf3 27 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 6 26 5.7E-12 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like UP17_05545 74cdd67de579f6a7231322265326cbf3 27 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 3 27 1.3E-13 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like UP17_00260 7b4a12c39519c5240f1c5733880e1450 83 PIRSF PIRSF037257 1 83 5.5E-35 T 11-10-2018 IPR009366 Protein Veg GO:0006355 UP17_00260 7b4a12c39519c5240f1c5733880e1450 83 Gene3D G3DSA:2.30.30.100 2 78 1.3E-24 T 11-10-2018 UP17_00260 7b4a12c39519c5240f1c5733880e1450 83 Pfam PF06257 Biofilm formation stimulator VEG 4 74 1.9E-29 T 11-10-2018 IPR009366 Protein Veg GO:0006355 UP17_14870 d1e5d151a0e7d2e402f3f488521548f3 292 SUPERFAMILY SSF55909 3 286 6.87E-50 T 11-10-2018 UP17_14870 d1e5d151a0e7d2e402f3f488521548f3 292 Gene3D G3DSA:3.75.10.10 1 283 6.5E-59 T 11-10-2018 UP17_14870 d1e5d151a0e7d2e402f3f488521548f3 292 Pfam PF02274 Amidinotransferase 71 283 5.9E-36 T 11-10-2018 UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 1.1E-207 T 11-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 Pfam PF11870 Domain of unknown function (DUF3390) 385 470 1.1E-20 T 11-10-2018 IPR024569 4Fe-4S binding protein, C-terminal UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 475 66.435 T 11-10-2018 IPR022825 Lactate utilization protein B UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 Pfam PF02589 LUD domain 71 295 8.3E-56 T 11-10-2018 IPR003741 LUD domain UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 Pfam PF13183 4Fe-4S dicluster domain 311 377 4.0E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 Gene3D G3DSA:3.40.50.10420 132 295 2.5E-14 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 SUPERFAMILY SSF46548 284 393 1.92E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 UP17_18015 e69febf95b4e5e52d35b13592b5ed324 476 SUPERFAMILY SSF100950 65 296 3.77E-39 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_19020 534cc38b7fdeca52fdead5720445d09f 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 2.7E-25 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 UP17_19020 534cc38b7fdeca52fdead5720445d09f 104 Gene3D G3DSA:1.10.3730.20 1 104 5.2E-23 T 11-10-2018 UP17_19020 534cc38b7fdeca52fdead5720445d09f 104 SUPERFAMILY SSF103481 6 102 2.88E-17 T 11-10-2018 UP17_00435 5da3f2ab392717abc3e4c724d2ce1af8 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 6.0E-47 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 UP17_00435 5da3f2ab392717abc3e4c724d2ce1af8 175 Gene3D G3DSA:3.30.70.560 2 169 1.7E-60 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 UP17_00435 5da3f2ab392717abc3e4c724d2ce1af8 175 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 UP17_00435 5da3f2ab392717abc3e4c724d2ce1af8 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 4.6E-40 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 UP17_00435 5da3f2ab392717abc3e4c724d2ce1af8 175 SUPERFAMILY SSF55083 3 158 1.96E-56 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 UP17_10380 c526098eac48976af55f1f4fc7ca70d2 258 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 17 221 2.9E-50 T 11-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 UP17_10380 c526098eac48976af55f1f4fc7ca70d2 258 Pfam PF02361 Cobalt transport protein 17 225 3.0E-35 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component UP17_18595 d6d69fa8a820544a5be2d110e17766f1 445 Pfam PF01554 MatE 241 386 8.2E-14 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_18595 d6d69fa8a820544a5be2d110e17766f1 445 Pfam PF01554 MatE 12 172 2.6E-19 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_18595 d6d69fa8a820544a5be2d110e17766f1 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 12 405 3.4E-73 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_21920 d027338c8b00558720fac34e4000e8bc 288 SMART SM00382 49 198 3.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_21920 d027338c8b00558720fac34e4000e8bc 288 SUPERFAMILY SSF52540 34 282 2.07E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_21920 d027338c8b00558720fac34e4000e8bc 288 Gene3D G3DSA:3.40.50.300 36 207 1.5E-34 T 11-10-2018 UP17_21920 d027338c8b00558720fac34e4000e8bc 288 Pfam PF07728 AAA domain (dynein-related subfamily) 52 189 3.0E-25 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 UP17_05645 c9828c701cb762e47b62b795cc4dd891 329 SUPERFAMILY SSF55681 3 242 1.42E-80 T 11-10-2018 UP17_05645 c9828c701cb762e47b62b795cc4dd891 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 3 322 5.7E-127 T 11-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 UP17_05645 c9828c701cb762e47b62b795cc4dd891 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 49 150 5.0E-10 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 UP17_05645 c9828c701cb762e47b62b795cc4dd891 329 SUPERFAMILY SSF82649 243 329 8.89E-28 T 11-10-2018 UP17_05645 c9828c701cb762e47b62b795cc4dd891 329 Gene3D G3DSA:3.30.390.50 243 329 2.4E-33 T 11-10-2018 UP17_05645 c9828c701cb762e47b62b795cc4dd891 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 328 7.7E-32 T 11-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 UP17_05645 c9828c701cb762e47b62b795cc4dd891 329 Gene3D G3DSA:3.30.930.10 3 242 5.6E-80 T 11-10-2018 UP17_24385 24de741661ffb576389d34136c790ddc 218 Pfam PF02163 Peptidase family M50 127 185 1.1E-8 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 UP17_00340 1442c28cf757e8b2ca9fa00818fdeaa7 87 Pfam PF01479 S4 domain 1 47 5.3E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00340 1442c28cf757e8b2ca9fa00818fdeaa7 87 PIRSF PIRSF038881 1 87 1.4E-33 T 11-10-2018 IPR025490 RNA-binding protein, HP1423 type UP17_00340 1442c28cf757e8b2ca9fa00818fdeaa7 87 Gene3D G3DSA:3.10.290.10 1 87 5.0E-25 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 UP17_00340 1442c28cf757e8b2ca9fa00818fdeaa7 87 SMART SM00363 1 63 1.1E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00340 1442c28cf757e8b2ca9fa00818fdeaa7 87 SUPERFAMILY SSF55174 1 76 1.7E-20 T 11-10-2018 UP17_14425 c430cb933020048550c201f58f6bfd3e 625 SUPERFAMILY SSF52540 314 530 3.83E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_14425 c430cb933020048550c201f58f6bfd3e 625 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_14425 c430cb933020048550c201f58f6bfd3e 625 SMART SM00382 344 515 6.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_14425 c430cb933020048550c201f58f6bfd3e 625 SMART SM00382 28 239 4.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_14425 c430cb933020048550c201f58f6bfd3e 625 Pfam PF16326 ABC transporter C-terminal domain 554 620 7.4E-11 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 UP17_14425 c430cb933020048550c201f58f6bfd3e 625 Gene3D G3DSA:3.40.50.300 2 281 1.5E-67 T 11-10-2018 UP17_14425 c430cb933020048550c201f58f6bfd3e 625 SUPERFAMILY SSF52540 6 239 6.9E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_14425 c430cb933020048550c201f58f6bfd3e 625 Pfam PF00005 ABC transporter 336 470 5.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_14425 c430cb933020048550c201f58f6bfd3e 625 Gene3D G3DSA:3.40.50.300 282 555 2.1E-61 T 11-10-2018 UP17_14425 c430cb933020048550c201f58f6bfd3e 625 Pfam PF00005 ABC transporter 20 187 6.7E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_14425 c430cb933020048550c201f58f6bfd3e 625 Pfam PF12848 ABC transporter 226 305 8.8E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain UP17_09390 f661e95e774876a3cc367baf82a1d683 101 SUPERFAMILY SSF159173 4 100 4.84E-29 T 11-10-2018 IPR023105 YkvR-like superfamily UP17_09390 f661e95e774876a3cc367baf82a1d683 101 Gene3D G3DSA:2.40.30.80 1 97 5.0E-32 T 11-10-2018 IPR023105 YkvR-like superfamily UP17_09390 f661e95e774876a3cc367baf82a1d683 101 Pfam PF11514 Protein of unknown function (DUF3219) 5 99 6.1E-29 T 11-10-2018 IPR021596 Protein of unknown function DUF3219 UP17_01130 e028ac1e6bfaebef3391358005f2d1f8 267 Gene3D G3DSA:1.10.3720.10 8 262 1.6E-41 T 11-10-2018 IPR035906 MetI-like superfamily UP17_01130 e028ac1e6bfaebef3391358005f2d1f8 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 258 9.8E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_01130 e028ac1e6bfaebef3391358005f2d1f8 267 SUPERFAMILY SSF161098 8 254 1.21E-49 T 11-10-2018 IPR035906 MetI-like superfamily UP17_05470 aafb5428f1d0d35edc5660b17ab11437 265 SUPERFAMILY SSF52096 10 265 6.77E-68 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_05470 aafb5428f1d0d35edc5660b17ab11437 265 Gene3D G3DSA:1.10.12.10 208 265 1.6E-17 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal UP17_05470 aafb5428f1d0d35edc5660b17ab11437 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 263 2.3E-53 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_05470 aafb5428f1d0d35edc5660b17ab11437 265 Gene3D G3DSA:3.90.226.10 3 204 3.4E-54 T 11-10-2018 UP17_03175 a8e6a9b41c88b1e4ee9569c13c9d4a07 121 Pfam PF07883 Cupin domain 41 91 8.9E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_03175 a8e6a9b41c88b1e4ee9569c13c9d4a07 121 SUPERFAMILY SSF51182 3 107 8.17E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_03175 a8e6a9b41c88b1e4ee9569c13c9d4a07 121 Gene3D G3DSA:2.60.120.10 2 106 1.4E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 437 49.11 T 11-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 Gene3D G3DSA:3.40.50.300 2 218 2.1E-67 T 11-10-2018 UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 SUPERFAMILY SSF52540 72 361 3.68E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 SMART SM00490 260 341 3.1E-29 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 SMART SM00487 23 224 6.6E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 Pfam PF00270 DEAD/DEAH box helicase 28 196 8.4E-41 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 Gene3D G3DSA:3.40.50.300 219 437 1.7E-43 T 11-10-2018 UP17_16600 68dc5e49cc5f2ea7c6c2ff1b8c8f3fd4 437 Pfam PF00271 Helicase conserved C-terminal domain 242 341 2.2E-26 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_15305 42df5f1a22f10e989f6fc6ff75467b2e 290 PIRSF PIRSF006483 2 284 1.6E-94 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_15305 42df5f1a22f10e989f6fc6ff75467b2e 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 6.6E-22 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 UP17_15305 42df5f1a22f10e989f6fc6ff75467b2e 290 Gene3D G3DSA:3.30.70.120 194 269 5.0E-27 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal UP17_15305 42df5f1a22f10e989f6fc6ff75467b2e 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 10 217 2.6E-65 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_22165 7aef30ff962ddd7c018654785d1f41b0 231 PIRSF PIRSF006171 3 231 7.2E-80 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 UP17_22165 7aef30ff962ddd7c018654785d1f41b0 231 SMART SM00448 5 118 6.3E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_22165 7aef30ff962ddd7c018654785d1f41b0 231 Gene3D G3DSA:3.40.50.2300 3 142 1.3E-34 T 11-10-2018 UP17_22165 7aef30ff962ddd7c018654785d1f41b0 231 Pfam PF00072 Response regulator receiver domain 7 118 2.7E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_22165 7aef30ff962ddd7c018654785d1f41b0 231 SUPERFAMILY SSF52172 4 134 3.13E-36 T 11-10-2018 IPR011006 CheY-like superfamily UP17_20055 fb2208841c31e91254ac0f529ee0bae5 149 Pfam PF14567 SMI1-KNR4 cell-wall 8 138 2.5E-31 T 11-10-2018 UP17_20055 fb2208841c31e91254ac0f529ee0bae5 149 SUPERFAMILY SSF160631 1 147 7.32E-34 T 11-10-2018 UP17_20055 fb2208841c31e91254ac0f529ee0bae5 149 Gene3D G3DSA:3.40.1580.10 3 149 2.1E-38 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily UP17_20055 fb2208841c31e91254ac0f529ee0bae5 149 SMART SM00860 22 136 2.8E-7 T 11-10-2018 IPR018958 Knr4/Smi1-like domain UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 TIGRFAM TIGR01441 GPR: GPR endopeptidase 10 371 1.3E-178 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 Gene3D G3DSA:3.40.50.1450 1 279 4.4E-111 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 Gene3D G3DSA:3.40.50.1450 287 372 1.4E-17 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 SUPERFAMILY SSF53163 3 371 5.23E-129 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 Pfam PF03418 Germination protease 17 371 5.2E-190 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 PIRSF PIRSF019549 3 372 1.7E-182 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 10 372 9.0E-143 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 UP17_16805 a8a881be41eb0bac3da9fef7abd0fe55 372 Hamap MF_00626 Germination protease [gpr]. 1 372 155.965 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 UP17_24280 a47be096e1d9510ea0b72ad6880d3685 216 Gene3D G3DSA:3.20.20.70 1 212 1.8E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_24280 a47be096e1d9510ea0b72ad6880d3685 216 SUPERFAMILY SSF51569 1 212 1.26E-75 T 11-10-2018 UP17_24280 a47be096e1d9510ea0b72ad6880d3685 216 Hamap MF_00494 Probable transaldolase [tal]. 1 215 46.213 T 11-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UP17_24280 a47be096e1d9510ea0b72ad6880d3685 216 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 203 1.7E-54 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 UP17_24280 a47be096e1d9510ea0b72ad6880d3685 216 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 7.7E-99 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 UP17_24280 a47be096e1d9510ea0b72ad6880d3685 216 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 UP17_20325 03c0d5ee1f96a1944e897ac5b9ec82eb 76 Pfam PF13129 Protein of unknown function (DUF3953) 32 70 1.3E-12 T 11-10-2018 IPR025018 Protein of unknown function DUF3953 UP17_18255 641e8644a4640994f7671b21cedc27f9 226 Gene3D G3DSA:3.60.15.10 1 226 6.6E-73 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_18255 641e8644a4640994f7671b21cedc27f9 226 Pfam PF13483 Beta-lactamase superfamily domain 2 192 1.3E-23 T 11-10-2018 UP17_18255 641e8644a4640994f7671b21cedc27f9 226 SUPERFAMILY SSF56281 1 218 1.24E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_18255 641e8644a4640994f7671b21cedc27f9 226 SMART SM00849 7 192 4.1E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_18255 641e8644a4640994f7671b21cedc27f9 226 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 226 37.861 T 11-10-2018 IPR022877 Protein of unknown funcion UPF0173 UP17_24375 8310f277b11835622aa52af47d0ca50d 689 Gene3D G3DSA:3.40.710.10 258 662 1.1E-115 T 11-10-2018 UP17_24375 8310f277b11835622aa52af47d0ca50d 689 Gene3D G3DSA:1.10.3810.10 55 253 1.5E-73 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_24375 8310f277b11835622aa52af47d0ca50d 689 Pfam PF00905 Penicillin binding protein transpeptidase domain 328 572 7.0E-35 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_24375 8310f277b11835622aa52af47d0ca50d 689 Pfam PF00912 Transglycosylase 62 238 1.5E-63 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_24375 8310f277b11835622aa52af47d0ca50d 689 SUPERFAMILY SSF53955 50 258 2.08E-73 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily UP17_24375 8310f277b11835622aa52af47d0ca50d 689 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 608 4.3E-181 T 11-10-2018 UP17_24375 8310f277b11835622aa52af47d0ca50d 689 SUPERFAMILY SSF56601 219 661 2.63E-116 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_21600 16719c29b152e8167c680b8e977fc5b4 232 Pfam PF13462 Thioredoxin 53 227 2.3E-32 T 11-10-2018 IPR012336 Thioredoxin-like fold UP17_21600 16719c29b152e8167c680b8e977fc5b4 232 SUPERFAMILY SSF52833 45 226 3.83E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_21600 16719c29b152e8167c680b8e977fc5b4 232 Gene3D G3DSA:3.40.30.10 35 232 4.2E-44 T 11-10-2018 UP17_25035 f878d1bd38738fb1181affdf112a2381 206 SMART SM01245 5 57 3.9E-22 T 11-10-2018 IPR032782 Jag, N-terminal UP17_25035 f878d1bd38738fb1181affdf112a2381 206 Pfam PF14804 Jag N-terminus 7 55 2.5E-19 T 11-10-2018 IPR032782 Jag, N-terminal UP17_25035 f878d1bd38738fb1181affdf112a2381 206 Pfam PF13083 KH domain 66 128 4.2E-15 T 11-10-2018 UP17_25035 f878d1bd38738fb1181affdf112a2381 206 Gene3D G3DSA:3.30.300.20 60 140 2.0E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_25035 f878d1bd38738fb1181affdf112a2381 206 Gene3D G3DSA:3.30.30.80 1 56 1.1E-17 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily UP17_25035 f878d1bd38738fb1181affdf112a2381 206 Pfam PF01424 R3H domain 144 203 4.7E-16 T 11-10-2018 IPR001374 R3H domain GO:0003676 UP17_25035 f878d1bd38738fb1181affdf112a2381 206 Gene3D G3DSA:3.30.1370.50 141 206 1.0E-25 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 UP17_25035 f878d1bd38738fb1181affdf112a2381 206 SMART SM00393 126 205 2.6E-21 T 11-10-2018 IPR001374 R3H domain GO:0003676 UP17_25035 f878d1bd38738fb1181affdf112a2381 206 SUPERFAMILY SSF82708 147 204 1.41E-9 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 UP17_03825 fe139465858eee8f21a2d6f629cc234a 306 Pfam PF00892 EamA-like transporter family 150 282 1.8E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_03825 fe139465858eee8f21a2d6f629cc234a 306 Pfam PF00892 EamA-like transporter family 5 136 1.3E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_03825 fe139465858eee8f21a2d6f629cc234a 306 SUPERFAMILY SSF103481 191 282 4.45E-10 T 11-10-2018 UP17_03825 fe139465858eee8f21a2d6f629cc234a 306 SUPERFAMILY SSF103481 43 136 6.54E-6 T 11-10-2018 UP17_11880 e4fe2368298a6beb5f0d68f0b2d57f52 450 Gene3D G3DSA:3.90.1150.10 75 444 8.9E-162 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_11880 e4fe2368298a6beb5f0d68f0b2d57f52 450 PIRSF PIRSF006815 5 448 1.4E-181 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 UP17_11880 e4fe2368298a6beb5f0d68f0b2d57f52 450 Gene3D G3DSA:3.40.640.10 86 351 8.9E-162 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_11880 e4fe2368298a6beb5f0d68f0b2d57f52 450 SUPERFAMILY SSF53383 5 447 1.2E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_11880 e4fe2368298a6beb5f0d68f0b2d57f52 450 Pfam PF02347 Glycine cleavage system P-protein 6 443 4.3E-147 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 UP17_11880 e4fe2368298a6beb5f0d68f0b2d57f52 450 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 5 447 48.254 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 UP17_10420 94dd91d1f197661a9552ffbe2002fddf 377 Pfam PF01888 CbiD 12 272 2.1E-92 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 UP17_10420 94dd91d1f197661a9552ffbe2002fddf 377 SUPERFAMILY SSF111342 5 289 1.18E-82 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 UP17_10420 94dd91d1f197661a9552ffbe2002fddf 377 PIRSF PIRSF026782 8 368 1.1E-118 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 UP17_10420 94dd91d1f197661a9552ffbe2002fddf 377 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 363 28.227 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 UP17_10420 94dd91d1f197661a9552ffbe2002fddf 377 Gene3D G3DSA:3.30.2110.10 14 186 3.7E-46 T 11-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 UP17_10420 94dd91d1f197661a9552ffbe2002fddf 377 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 19 361 5.3E-64 T 11-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 UP17_22660 22ebfad9a08815e2d093abe84a8e88c9 374 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 371 6.0E-67 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_22660 22ebfad9a08815e2d093abe84a8e88c9 374 Pfam PF03845 Spore germination protein 11 334 4.6E-59 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_08360 dd7ccadb7d66fa0daa2c43d6890d1742 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 29.456 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 UP17_08360 dd7ccadb7d66fa0daa2c43d6890d1742 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 4.5E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 UP17_08360 dd7ccadb7d66fa0daa2c43d6890d1742 77 Gene3D G3DSA:2.30.30.100 1 74 1.0E-33 T 11-10-2018 UP17_08360 dd7ccadb7d66fa0daa2c43d6890d1742 77 Pfam PF17209 Hfq protein 7 69 6.8E-32 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 UP17_08360 dd7ccadb7d66fa0daa2c43d6890d1742 77 SUPERFAMILY SSF50182 6 64 2.86E-23 T 11-10-2018 IPR010920 LSM domain superfamily UP17_13345 72901ee9c51dba059a78f78213f5a0b8 297 SUPERFAMILY SSF51735 4 296 4.24E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13345 72901ee9c51dba059a78f78213f5a0b8 297 Gene3D G3DSA:3.90.25.10 169 286 1.7E-62 T 11-10-2018 UP17_13345 72901ee9c51dba059a78f78213f5a0b8 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 229 7.2E-40 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 UP17_13345 72901ee9c51dba059a78f78213f5a0b8 297 Gene3D G3DSA:3.40.50.720 8 280 1.7E-62 T 11-10-2018 UP17_14170 bef2bfa64c9f75478638e61ab34ccb2f 260 Pfam PF00795 Carbon-nitrogen hydrolase 4 246 8.7E-51 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 UP17_14170 bef2bfa64c9f75478638e61ab34ccb2f 260 Gene3D G3DSA:3.60.110.10 1 260 2.8E-92 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily UP17_14170 bef2bfa64c9f75478638e61ab34ccb2f 260 SUPERFAMILY SSF56317 3 260 3.53E-74 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily UP17_15070 eefd38c6392dbb409c33e0166a8a5b36 437 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 7 416 1.7E-140 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 UP17_15070 eefd38c6392dbb409c33e0166a8a5b36 437 Pfam PF00860 Permease family 9 386 5.9E-121 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 UP17_15070 eefd38c6392dbb409c33e0166a8a5b36 437 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 333 353 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 UP17_15070 eefd38c6392dbb409c33e0166a8a5b36 437 TIGRFAM TIGR03173 pbuX: xanthine permease 12 418 1.4E-167 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 UP17_16695 efda59afe8fbc5231d70463df6797146 723 Pfam PF01966 HD domain 509 650 8.6E-17 T 11-10-2018 IPR006674 HD domain UP17_16695 efda59afe8fbc5231d70463df6797146 723 TIGRFAM TIGR00277 HDIG: HDIG domain 506 604 2.2E-26 T 11-10-2018 IPR006675 HDIG domain UP17_16695 efda59afe8fbc5231d70463df6797146 723 Pfam PF07698 7TM receptor with intracellular HD hydrolase 285 484 1.0E-35 T 11-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain UP17_16695 efda59afe8fbc5231d70463df6797146 723 SMART SM00471 505 660 4.9E-9 T 11-10-2018 IPR003607 HD/PDEase domain UP17_16695 efda59afe8fbc5231d70463df6797146 723 Gene3D G3DSA:1.10.3210.10 482 678 4.7E-25 T 11-10-2018 UP17_16695 efda59afe8fbc5231d70463df6797146 723 SUPERFAMILY SSF109604 508 699 9.99E-14 T 11-10-2018 UP17_16695 efda59afe8fbc5231d70463df6797146 723 Pfam PF07697 7TM-HD extracellular 50 276 1.1E-30 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain UP17_17995 5bf6d2d4798352793c38612352707abe 370 Pfam PF13556 PucR C-terminal helix-turn-helix domain 306 364 8.3E-19 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain UP17_17995 5bf6d2d4798352793c38612352707abe 370 Pfam PF05651 Putative sugar diacid recognition 5 135 7.1E-46 T 11-10-2018 IPR008599 Putative sugar diacid recognition UP17_17995 5bf6d2d4798352793c38612352707abe 370 Gene3D G3DSA:1.10.10.2840 245 368 7.2E-20 T 11-10-2018 UP17_12855 789574f2a764bca850aaec402257395a 251 SUPERFAMILY SSF56219 1 248 7.33E-80 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily UP17_12855 789574f2a764bca850aaec402257395a 251 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 249 9.3E-100 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 UP17_12855 789574f2a764bca850aaec402257395a 251 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 248 3.8E-97 T 11-10-2018 UP17_12855 789574f2a764bca850aaec402257395a 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 242 3.6E-20 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase UP17_12855 789574f2a764bca850aaec402257395a 251 Gene3D G3DSA:3.60.10.10 1 249 2.9E-94 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily UP17_12855 789574f2a764bca850aaec402257395a 251 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 UP17_12855 789574f2a764bca850aaec402257395a 251 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 184 200 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 UP17_19030 748d9205df368fa6d4458a7fefdf16ed 73 SUPERFAMILY SSF47413 1 70 1.55E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_19030 748d9205df368fa6d4458a7fefdf16ed 73 SMART SM00530 6 62 1.8E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19030 748d9205df368fa6d4458a7fefdf16ed 73 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 5.4E-23 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_19030 748d9205df368fa6d4458a7fefdf16ed 73 Gene3D G3DSA:1.10.260.40 6 73 5.5E-10 T 11-10-2018 UP17_15150 e8baf23373d84f1a603ab20e83d7952a 203 Pfam PF03838 Recombination protein U 31 196 5.7E-65 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 UP17_15150 e8baf23373d84f1a603ab20e83d7952a 203 Gene3D G3DSA:3.40.1350.10 34 202 4.3E-66 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 UP17_15150 e8baf23373d84f1a603ab20e83d7952a 203 TIGRFAM TIGR00648 recU: recombination protein U 30 198 1.8E-79 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 UP17_15150 e8baf23373d84f1a603ab20e83d7952a 203 SUPERFAMILY SSF52980 34 199 9.38E-66 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 UP17_15150 e8baf23373d84f1a603ab20e83d7952a 203 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 203 91.819 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 UP17_15150 e8baf23373d84f1a603ab20e83d7952a 203 PIRSF PIRSF037785 23 203 1.1E-74 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 UP17_20870 5c2a8e95ed5b770f80e3519ce3e8e2d8 232 Gene3D G3DSA:3.40.50.620 11 150 1.5E-26 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_20870 5c2a8e95ed5b770f80e3519ce3e8e2d8 232 Pfam PF01902 Diphthamide synthase 15 227 7.1E-45 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 UP17_20870 5c2a8e95ed5b770f80e3519ce3e8e2d8 232 SUPERFAMILY SSF52402 15 226 5.35E-62 T 11-10-2018 UP17_20870 5c2a8e95ed5b770f80e3519ce3e8e2d8 232 Gene3D G3DSA:3.90.1490.10 152 232 1.1E-13 T 11-10-2018 UP17_20870 5c2a8e95ed5b770f80e3519ce3e8e2d8 232 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 15 231 1.8E-45 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 UP17_14745 a3ce899432f2ac5a4c3fb84da6e0df4d 288 Gene3D G3DSA:1.10.10.10 2 84 1.2E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_14745 a3ce899432f2ac5a4c3fb84da6e0df4d 288 Pfam PF01380 SIS domain 129 255 4.3E-13 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_14745 a3ce899432f2ac5a4c3fb84da6e0df4d 288 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 79 6.5E-20 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 UP17_14745 a3ce899432f2ac5a4c3fb84da6e0df4d 288 SUPERFAMILY SSF53697 98 276 8.38E-35 T 11-10-2018 UP17_14745 a3ce899432f2ac5a4c3fb84da6e0df4d 288 SUPERFAMILY SSF46689 4 77 3.94E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_14745 a3ce899432f2ac5a4c3fb84da6e0df4d 288 Gene3D G3DSA:3.40.50.10490 95 283 1.7E-39 T 11-10-2018 UP17_14920 42178ba89d80a39379a5b776c900ff87 283 Gene3D G3DSA:1.10.10.10 1 78 6.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_14920 42178ba89d80a39379a5b776c900ff87 283 Pfam PF01380 SIS domain 129 257 4.6E-17 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_14920 42178ba89d80a39379a5b776c900ff87 283 SUPERFAMILY SSF53697 96 276 1.39E-35 T 11-10-2018 UP17_14920 42178ba89d80a39379a5b776c900ff87 283 SUPERFAMILY SSF46689 3 79 4.66E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_14920 42178ba89d80a39379a5b776c900ff87 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 78 2.2E-19 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 UP17_14920 42178ba89d80a39379a5b776c900ff87 283 Gene3D G3DSA:3.40.50.10490 97 281 1.3E-40 T 11-10-2018 UP17_03315 e34a2306be069c768cda447268365c83 396 Gene3D G3DSA:1.20.1250.20 5 384 1.7E-40 T 11-10-2018 UP17_03315 e34a2306be069c768cda447268365c83 396 Pfam PF07690 Major Facilitator Superfamily 18 314 1.6E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_03315 e34a2306be069c768cda447268365c83 396 SUPERFAMILY SSF103473 5 391 4.84E-52 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_20580 9b70d04466c66ef4e60395b898fed210 647 Gene3D G3DSA:3.40.50.720 2 187 2.1E-25 T 11-10-2018 UP17_20580 9b70d04466c66ef4e60395b898fed210 647 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 264 647 3.1E-130 T 11-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component UP17_20580 9b70d04466c66ef4e60395b898fed210 647 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 264 602 6.1E-88 T 11-10-2018 IPR003776 YcaO-like domain UP17_20580 9b70d04466c66ef4e60395b898fed210 647 Gene3D G3DSA:3.30.160.660 408 550 1.7E-45 T 11-10-2018 UP17_20580 9b70d04466c66ef4e60395b898fed210 647 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 68 234 1.4E-45 T 11-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain UP17_20580 9b70d04466c66ef4e60395b898fed210 647 Gene3D G3DSA:1.10.490.140 272 603 1.7E-45 T 11-10-2018 UP17_20580 9b70d04466c66ef4e60395b898fed210 647 Gene3D G3DSA:2.40.50.820 294 373 1.7E-45 T 11-10-2018 UP17_14105 c60abd66180f408cd8d74334a004f34a 243 Gene3D G3DSA:3.40.33.10 5 241 1.1E-67 T 11-10-2018 IPR035940 CAP superfamily UP17_14105 c60abd66180f408cd8d74334a004f34a 243 SUPERFAMILY SSF55797 120 240 2.62E-27 T 11-10-2018 IPR035940 CAP superfamily UP17_14105 c60abd66180f408cd8d74334a004f34a 243 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 120 242 1.6E-62 T 11-10-2018 IPR014258 CAP domain, YkwD-like UP17_14105 c60abd66180f408cd8d74334a004f34a 243 Pfam PF00188 Cysteine-rich secretory protein family 128 240 1.6E-22 T 11-10-2018 IPR014044 CAP domain UP17_09970 5b84fa68635c4ced8fa7f13670a23b0f 149 SUPERFAMILY SSF55781 11 138 1.67E-13 T 11-10-2018 UP17_09970 5b84fa68635c4ced8fa7f13670a23b0f 149 Pfam PF01590 GAF domain 11 145 1.4E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_09970 5b84fa68635c4ced8fa7f13670a23b0f 149 Gene3D G3DSA:3.30.450.40 10 147 7.2E-31 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_08105 e78fa8124fd5dd94e29b722fa06a2993 366 SUPERFAMILY SSF53822 57 306 5.89E-12 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_08105 e78fa8124fd5dd94e29b722fa06a2993 366 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 44 355 3.9E-86 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 UP17_08105 e78fa8124fd5dd94e29b722fa06a2993 366 Gene3D G3DSA:3.40.50.2300 150 350 9.2E-109 T 11-10-2018 UP17_08105 e78fa8124fd5dd94e29b722fa06a2993 366 Gene3D G3DSA:3.40.50.2300 47 318 9.2E-109 T 11-10-2018 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 Gene3D G3DSA:3.30.870.10 249 463 5.6E-26 T 11-10-2018 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 SUPERFAMILY SSF56024 280 431 9.42E-21 T 11-10-2018 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 SMART SM00155 151 178 1.5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 SMART SM00155 371 398 0.088 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 Gene3D G3DSA:3.30.870.10 52 248 3.2E-31 T 11-10-2018 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 SUPERFAMILY SSF56024 51 221 1.73E-27 T 11-10-2018 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 Pfam PF13091 PLD-like domain 298 418 1.7E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_19435 17da4ffbe363aeefbbd89e974224cdf9 471 Pfam PF13091 PLD-like domain 68 184 4.4E-17 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_18975 a93949d6509fa95b2446b2638366ba05 451 PRINTS PR00758 Arsenical pump membrane protein signature 418 442 9.9E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_18975 a93949d6509fa95b2446b2638366ba05 451 PRINTS PR00758 Arsenical pump membrane protein signature 344 366 9.9E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_18975 a93949d6509fa95b2446b2638366ba05 451 PRINTS PR00758 Arsenical pump membrane protein signature 105 129 9.9E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_18975 a93949d6509fa95b2446b2638366ba05 451 PRINTS PR00758 Arsenical pump membrane protein signature 385 410 9.9E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_18975 a93949d6509fa95b2446b2638366ba05 451 Pfam PF02040 Arsenical pump membrane protein 8 446 2.0E-72 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 UP17_00360 f146a1cc55566e426bd36460ca4928a3 151 SUPERFAMILY SSF50249 4 86 8.92E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_00360 f146a1cc55566e426bd36460ca4928a3 151 SMART SM00316 4 73 8.2E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_00360 f146a1cc55566e426bd36460ca4928a3 151 Pfam PF00575 S1 RNA binding domain 4 72 5.2E-20 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_00360 f146a1cc55566e426bd36460ca4928a3 151 Gene3D G3DSA:2.40.50.140 1 84 5.1E-28 T 11-10-2018 UP17_09405 efd424d908bf2b6b2105dbee8859da7c 1043 SUPERFAMILY SSF75712 471 577 3.27E-6 T 11-10-2018 UP17_09405 efd424d908bf2b6b2105dbee8859da7c 1043 Pfam PF13476 AAA domain 6 206 2.4E-26 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain UP17_09405 efd424d908bf2b6b2105dbee8859da7c 1043 Gene3D G3DSA:3.40.50.300 1 235 2.6E-40 T 11-10-2018 UP17_09405 efd424d908bf2b6b2105dbee8859da7c 1043 SUPERFAMILY SSF52540 2 1036 3.17E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09405 efd424d908bf2b6b2105dbee8859da7c 1043 Pfam PF13558 Putative exonuclease SbcCD, C subunit 935 999 1.9E-13 T 11-10-2018 UP17_09405 efd424d908bf2b6b2105dbee8859da7c 1043 Gene3D G3DSA:3.40.50.300 740 1039 2.4E-28 T 11-10-2018 UP17_13840 f7395d27ad617a502716ec3a25e7487c 442 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 7 433 2.7E-107 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_13840 f7395d27ad617a502716ec3a25e7487c 442 PIRSF PIRSF005690 1 437 1.7E-110 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_05340 889c42100b57548cbb1289a1014b9f04 393 Gene3D G3DSA:3.90.1150.10 251 385 1.6E-45 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_05340 889c42100b57548cbb1289a1014b9f04 393 PIRSF PIRSF001434 1 385 3.2E-142 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_05340 889c42100b57548cbb1289a1014b9f04 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_05340 889c42100b57548cbb1289a1014b9f04 393 Gene3D G3DSA:3.40.640.10 1 250 1.5E-91 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_05340 889c42100b57548cbb1289a1014b9f04 393 SUPERFAMILY SSF53383 15 382 8.7E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05340 889c42100b57548cbb1289a1014b9f04 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 381 1.1E-146 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_21550 901075b8b39bd67665fbb29e85ba298f 200 Pfam PF08241 Methyltransferase domain 49 147 2.4E-20 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 UP17_21550 901075b8b39bd67665fbb29e85ba298f 200 SUPERFAMILY SSF53335 23 194 2.81E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_21550 901075b8b39bd67665fbb29e85ba298f 200 Gene3D G3DSA:3.40.50.150 18 199 4.8E-35 T 11-10-2018 UP17_22665 2eb72d564aae23c76792df051a468651 403 Gene3D G3DSA:3.30.300.210 244 396 3.1E-42 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_22665 2eb72d564aae23c76792df051a468651 403 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 229 392 1.6E-40 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_22665 2eb72d564aae23c76792df051a468651 403 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 6 394 2.7E-106 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_16755 b345391e486f8f04c8218892eb777706 250 SUPERFAMILY SSF88697 2 68 3.48E-14 T 11-10-2018 IPR015947 PUA-like superfamily UP17_16755 b345391e486f8f04c8218892eb777706 250 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 248 9.3E-63 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 UP17_16755 b345391e486f8f04c8218892eb777706 250 SUPERFAMILY SSF75217 72 248 1.13E-54 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases UP17_16755 b345391e486f8f04c8218892eb777706 250 PIRSF PIRSF015601 1 248 4.4E-62 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 UP17_16755 b345391e486f8f04c8218892eb777706 250 Gene3D G3DSA:3.40.1280.10 1 250 7.9E-88 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal UP17_16755 b345391e486f8f04c8218892eb777706 250 Pfam PF04452 RNA methyltransferase 16 244 9.5E-71 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 SUPERFAMILY SSF54570 3 84 1.96E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 Gene3D G3DSA:3.30.860.10 1 92 7.1E-41 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.2E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.2E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.2E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.407 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 5.9E-48 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 PIRSF PIRSF002144 1 92 5.3E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00710 8764ad1b53f64ad8d955198e1850e146 92 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_02120 4073818ac0b426f90bf6ebec91a1d91b 149 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 29 128 3.3E-9 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like UP17_18725 5f48268d43c80a512f5c619d2e10f396 186 Pfam PF04982 HPP family 68 182 1.1E-30 T 11-10-2018 IPR007065 HPP UP17_23675 7e95a5f7a4e55992c0984f382efcf4bc 461 Pfam PF01551 Peptidase family M23 352 455 7.3E-28 T 11-10-2018 IPR016047 Peptidase M23 UP17_23675 7e95a5f7a4e55992c0984f382efcf4bc 461 Gene3D G3DSA:2.70.70.10 318 460 3.2E-36 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_23675 7e95a5f7a4e55992c0984f382efcf4bc 461 SUPERFAMILY SSF51261 246 459 4.81E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_23675 7e95a5f7a4e55992c0984f382efcf4bc 461 Gene3D G3DSA:1.20.5.340 24 106 1.1E-5 T 11-10-2018 UP17_15885 35b878cb4792f2084944477150e2b332 264 SMART SM00382 31 235 1.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_15885 35b878cb4792f2084944477150e2b332 264 SUPERFAMILY SSF52540 2 232 8.21E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15885 35b878cb4792f2084944477150e2b332 264 Pfam PF00005 ABC transporter 23 177 1.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_15885 35b878cb4792f2084944477150e2b332 264 Gene3D G3DSA:3.40.50.300 1 261 2.5E-56 T 11-10-2018 UP17_15885 35b878cb4792f2084944477150e2b332 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_13925 c1108eb7697a024e0d8fd9533bc82e82 173 Gene3D G3DSA:2.40.50.140 91 172 3.2E-30 T 11-10-2018 UP17_17110 98ddbe263fb145f5f594dad0103af386 144 SUPERFAMILY SSF54427 28 143 1.93E-9 T 11-10-2018 IPR032710 NTF2-like domain superfamily UP17_10495 c803156f7c91101fb140468942987e04 186 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 11 179 32.65 T 11-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 UP17_10495 c803156f7c91101fb140468942987e04 186 Gene3D G3DSA:2.60.120.10 11 185 1.8E-62 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_10495 c803156f7c91101fb140468942987e04 186 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 15 174 8.6E-70 T 11-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 UP17_10495 c803156f7c91101fb140468942987e04 186 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 12 160 1.2E-47 T 11-10-2018 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 UP17_10495 c803156f7c91101fb140468942987e04 186 SUPERFAMILY SSF51182 15 176 2.93E-47 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_17235 7a151c6c201468ebade2bbc61bf1f2db 606 Gene3D G3DSA:3.40.50.720 134 260 1.7E-37 T 11-10-2018 UP17_17235 7a151c6c201468ebade2bbc61bf1f2db 606 Pfam PF13727 CoA-binding domain 72 234 7.7E-18 T 11-10-2018 UP17_17235 7a151c6c201468ebade2bbc61bf1f2db 606 SUPERFAMILY SSF51735 276 540 6.75E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_17235 7a151c6c201468ebade2bbc61bf1f2db 606 SUPERFAMILY SSF53335 102 336 2.16E-16 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_17235 7a151c6c201468ebade2bbc61bf1f2db 606 Gene3D G3DSA:3.40.50.720 274 603 1.0E-118 T 11-10-2018 UP17_17235 7a151c6c201468ebade2bbc61bf1f2db 606 Pfam PF02719 Polysaccharide biosynthesis protein 279 560 2.5E-125 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain UP17_03220 2f37418fe2b136d720c327d9eb9b5c4d 203 SUPERFAMILY SSF50475 12 175 9.16E-37 T 11-10-2018 UP17_03220 2f37418fe2b136d720c327d9eb9b5c4d 203 PIRSF PIRSF010372 1 203 2.1E-60 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type UP17_03220 2f37418fe2b136d720c327d9eb9b5c4d 203 Gene3D G3DSA:2.30.110.10 1 202 2.9E-71 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 UP17_03220 2f37418fe2b136d720c327d9eb9b5c4d 203 Pfam PF04299 Putative FMN-binding domain 1 158 4.6E-51 T 11-10-2018 IPR007396 Transcriptional regulator PAI 2-type UP17_12510 e783c79eaa5b7728fb4528d98c735232 249 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 106 234 4.3E-23 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_12510 e783c79eaa5b7728fb4528d98c735232 249 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 9 238 1.5E-53 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_12510 e783c79eaa5b7728fb4528d98c735232 249 Gene3D G3DSA:3.30.300.210 123 238 2.2E-13 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_20895 15b59cda617d5980c359684bc49562f0 146 SUPERFAMILY SSF55729 6 146 8.06E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_20895 15b59cda617d5980c359684bc49562f0 146 Gene3D G3DSA:3.40.630.30 2 144 2.4E-21 T 11-10-2018 UP17_20895 15b59cda617d5980c359684bc49562f0 146 Pfam PF00583 Acetyltransferase (GNAT) family 26 128 1.2E-9 T 11-10-2018 IPR000182 GNAT domain UP17_14390 9753a16e47b7b486712bbc44c60eef09 256 Pfam PF03741 Integral membrane protein TerC family 36 218 7.8E-53 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 UP17_14390 9753a16e47b7b486712bbc44c60eef09 256 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 33 246 3.6E-77 T 11-10-2018 IPR022493 Integral membrane YkoY UP17_14340 96020b0db2cac4d89e5520e60f6ae949 280 Gene3D G3DSA:3.40.50.10170 1 152 6.6E-54 T 11-10-2018 UP17_14340 96020b0db2cac4d89e5520e60f6ae949 280 Gene3D G3DSA:3.30.1180.10 153 278 8.6E-36 T 11-10-2018 UP17_14340 96020b0db2cac4d89e5520e60f6ae949 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 278 1.8E-90 T 11-10-2018 IPR003797 DegV UP17_14340 96020b0db2cac4d89e5520e60f6ae949 280 SUPERFAMILY SSF82549 1 279 5.49E-89 T 11-10-2018 UP17_14340 96020b0db2cac4d89e5520e60f6ae949 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 5.4E-98 T 11-10-2018 IPR003797 DegV UP17_06820 0029f05f3e859df5204b9b2bde4f25f5 321 Gene3D G3DSA:1.20.58.340 239 315 2.0E-30 T 11-10-2018 UP17_06820 0029f05f3e859df5204b9b2bde4f25f5 321 SUPERFAMILY SSF144083 250 312 4.97E-21 T 11-10-2018 UP17_06820 0029f05f3e859df5204b9b2bde4f25f5 321 Gene3D G3DSA:1.20.58.340 125 237 6.8E-28 T 11-10-2018 UP17_06820 0029f05f3e859df5204b9b2bde4f25f5 321 Gene3D G3DSA:3.30.460.20 2 124 4.5E-29 T 11-10-2018 UP17_06820 0029f05f3e859df5204b9b2bde4f25f5 321 Pfam PF01544 CorA-like Mg2+ transporter protein 28 310 5.5E-80 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 UP17_06820 0029f05f3e859df5204b9b2bde4f25f5 321 SUPERFAMILY SSF143865 19 249 8.89E-60 T 11-10-2018 UP17_06820 0029f05f3e859df5204b9b2bde4f25f5 321 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 6 315 1.1E-92 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 UP17_09645 76c0eb7a4aeda2f23940b0a369aba780 416 Pfam PF12698 ABC-2 family transporter protein 19 386 8.7E-57 T 11-10-2018 UP17_15620 443dc8bee127154d90854e5baec10245 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.8E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_15620 443dc8bee127154d90854e5baec10245 238 Gene3D G3DSA:1.10.10.10 137 237 1.9E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15620 443dc8bee127154d90854e5baec10245 238 Pfam PF00072 Response regulator receiver domain 7 115 6.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_15620 443dc8bee127154d90854e5baec10245 238 SMART SM00862 156 233 1.6E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_15620 443dc8bee127154d90854e5baec10245 238 Gene3D G3DSA:3.40.50.2300 2 136 2.4E-41 T 11-10-2018 UP17_15620 443dc8bee127154d90854e5baec10245 238 SUPERFAMILY SSF52172 3 126 4.84E-43 T 11-10-2018 IPR011006 CheY-like superfamily UP17_15620 443dc8bee127154d90854e5baec10245 238 SUPERFAMILY SSF46894 132 234 3.19E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_15620 443dc8bee127154d90854e5baec10245 238 SMART SM00448 5 115 1.3E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_03880 05c66ab8a8dde6bb901f82b340fdd947 263 Pfam PF06182 ABC-2 family transporter protein 31 259 3.0E-17 T 11-10-2018 IPR010390 Protein of unknown function DUF990 UP17_24380 7cb8ffc53d44e845a52399ea5a1300bc 169 Pfam PF08741 YwhD family 6 167 5.6E-83 T 11-10-2018 IPR014852 Uncharacterised protein YwhD UP17_18750 e048201cabea23509d97ef1b7e89cc9e 648 Pfam PF02687 FtsX-like permease family 85 174 8.8E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 UP17_18750 e048201cabea23509d97ef1b7e89cc9e 648 PIRSF PIRSF018968 1 648 1.1E-155 T 11-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 ProSitePatterns PS01071 grpE protein signature. 153 196 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 Gene3D G3DSA:2.30.22.10 142 197 4.6E-24 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 Gene3D G3DSA:3.90.20.20 26 140 7.2E-23 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 Pfam PF01025 GrpE 35 198 2.2E-52 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 SUPERFAMILY SSF51064 143 198 4.45E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 Hamap MF_01151 Protein GrpE [grpE]. 7 198 20.518 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 PRINTS PR00773 GrpE protein signature 177 196 1.1E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 PRINTS PR00773 GrpE protein signature 68 84 1.1E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 PRINTS PR00773 GrpE protein signature 150 165 1.1E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 PRINTS PR00773 GrpE protein signature 96 111 1.1E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 UP17_16775 3595469634007eb2ed7f2c279dc49f61 198 SUPERFAMILY SSF58014 49 142 2.88E-24 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 UP17_09100 c28c117ffcfa3e48acf77d87b9e92ce3 87 Gene3D G3DSA:3.30.565.10 2 86 5.9E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_09100 c28c117ffcfa3e48acf77d87b9e92ce3 87 SMART SM00387 1 87 1.6E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_09100 c28c117ffcfa3e48acf77d87b9e92ce3 87 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 4 85 7.0E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_09100 c28c117ffcfa3e48acf77d87b9e92ce3 87 SUPERFAMILY SSF55874 3 83 1.2E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_06530 2a4d38c6aeec47344b780b627acba2b6 348 Gene3D G3DSA:3.40.630.10 15 343 3.4E-122 T 11-10-2018 UP17_06530 2a4d38c6aeec47344b780b627acba2b6 348 Gene3D G3DSA:2.40.30.40 78 172 3.4E-122 T 11-10-2018 IPR023367 Peptidase M42, domain 2 UP17_06530 2a4d38c6aeec47344b780b627acba2b6 348 PIRSF PIRSF001123 6 346 2.3E-38 T 11-10-2018 IPR008007 Peptidase M42 UP17_06530 2a4d38c6aeec47344b780b627acba2b6 348 SUPERFAMILY SSF53187 8 345 4.98E-52 T 11-10-2018 UP17_06530 2a4d38c6aeec47344b780b627acba2b6 348 Pfam PF05343 M42 glutamyl aminopeptidase 50 338 6.9E-84 T 11-10-2018 IPR008007 Peptidase M42 UP17_06530 2a4d38c6aeec47344b780b627acba2b6 348 SUPERFAMILY SSF101821 75 187 3.21E-30 T 11-10-2018 UP17_21280 4e5341a4ffc390b57106e0a43ccf1dff 186 Pfam PF13302 Acetyltransferase (GNAT) domain 12 132 2.4E-15 T 11-10-2018 IPR000182 GNAT domain UP17_21280 4e5341a4ffc390b57106e0a43ccf1dff 186 SUPERFAMILY SSF55729 9 135 7.9E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_21280 4e5341a4ffc390b57106e0a43ccf1dff 186 Gene3D G3DSA:3.40.630.30 2 171 6.1E-23 T 11-10-2018 UP17_16300 110630da7fd09e31f460e0d97df237a6 127 Pfam PF01844 HNH endonuclease 59 102 5.0E-7 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 UP17_21580 86cc7fa8518bbdeaadf1c52cb51b1e30 295 Gene3D G3DSA:3.90.550.10 1 291 1.8E-98 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_21580 86cc7fa8518bbdeaadf1c52cb51b1e30 295 SUPERFAMILY SSF53448 1 268 3.03E-74 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_21580 86cc7fa8518bbdeaadf1c52cb51b1e30 295 Pfam PF00483 Nucleotidyl transferase 6 263 5.4E-39 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 UP17_21580 86cc7fa8518bbdeaadf1c52cb51b1e30 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 7.8E-121 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 7.5E-74 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 5.2E-178 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 SUPERFAMILY SSF144052 4 409 2.35E-152 T 11-10-2018 UP17_06415 facb1ae50711e8163be4b75ebcada0da 410 Gene3D G3DSA:3.40.1830.10 1 179 6.6E-69 T 11-10-2018 IPR035097 Peptidase M29, N-terminal UP17_04475 842d8dbf7614ea08c39d38261e7f116b 412 Gene3D G3DSA:1.20.1250.20 6 403 9.3E-39 T 11-10-2018 UP17_04475 842d8dbf7614ea08c39d38261e7f116b 412 SUPERFAMILY SSF103473 18 401 3.66E-50 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_04475 842d8dbf7614ea08c39d38261e7f116b 412 Pfam PF07690 Major Facilitator Superfamily 41 365 3.4E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_09345 582f4b88421895ab3c86c39a4c9f629e 96 Pfam PF07875 Coat F domain 15 76 1.1E-20 T 11-10-2018 IPR012851 Spore coat protein CotF-like UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 Gene3D G3DSA:3.40.50.2300 1 122 6.4E-38 T 11-10-2018 UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 Gene3D G3DSA:1.10.10.10 123 219 4.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 SMART SM00448 1 112 1.3E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 SMART SM00862 142 217 4.9E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 Pfam PF00072 Response regulator receiver domain 3 113 5.4E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 217 1.2E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 SUPERFAMILY SSF52172 1 122 5.98E-39 T 11-10-2018 IPR011006 CheY-like superfamily UP17_12395 f5031a869d68e9e4679fa89d74a417cd 225 SUPERFAMILY SSF46894 133 218 2.13E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 UP17_10065 86c5f69bad09fa55e4a018dc109b40e2 401 Pfam PF03616 Sodium/glutamate symporter 4 369 3.9E-128 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 UP17_10065 86c5f69bad09fa55e4a018dc109b40e2 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 4 399 1.4E-110 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 UP17_10065 86c5f69bad09fa55e4a018dc109b40e2 401 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 3 400 22.9 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 UP17_22955 d7cad872ad0b2ebe0f387f5771a015d0 160 Pfam PF02681 Divergent PAP2 family 6 149 1.8E-50 T 11-10-2018 IPR003832 Protein of unknown function DUF212 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 SMART SM00788 3 422 6.1E-289 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 Gene3D G3DSA:3.90.170.10 265 429 2.6E-69 T 11-10-2018 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 209.136 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 SUPERFAMILY SSF52540 1 427 1.59E-174 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 Gene3D G3DSA:1.10.300.10 100 199 5.2E-105 T 11-10-2018 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 Gene3D G3DSA:3.40.440.10 5 252 5.2E-105 T 11-10-2018 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 4.5E-184 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 UP17_24930 c12bf66127cec07e16afc1cb72f43ff5 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 426 1.4E-192 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 UP17_04105 c790f658bfd2f4a4ec60a3b498b36abb 262 Gene3D G3DSA:1.10.150.240 15 131 6.0E-45 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 UP17_04105 c790f658bfd2f4a4ec60a3b498b36abb 262 Gene3D G3DSA:3.40.50.1000 4 252 6.0E-45 T 11-10-2018 IPR023214 HAD superfamily UP17_04105 c790f658bfd2f4a4ec60a3b498b36abb 262 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 231 1.4E-22 T 11-10-2018 UP17_04105 c790f658bfd2f4a4ec60a3b498b36abb 262 SUPERFAMILY SSF56784 2 258 2.4E-39 T 11-10-2018 IPR036412 HAD-like superfamily UP17_04105 c790f658bfd2f4a4ec60a3b498b36abb 262 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 145 225 3.4E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 UP17_07400 c0ea490f09e8abe13a4c3e9cdea3f8e3 171 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 8.6E-19 T 11-10-2018 IPR019933 DivIVA domain UP17_07400 c0ea490f09e8abe13a4c3e9cdea3f8e3 171 Pfam PF05103 DivIVA protein 3 133 1.5E-49 T 11-10-2018 IPR007793 DivIVA family UP17_06775 1b7409a8eba05ba4bf08e7c02688cb8a 264 Pfam PF00565 Staphylococcal nuclease homologue 78 185 3.4E-31 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 UP17_06775 1b7409a8eba05ba4bf08e7c02688cb8a 264 ProSitePatterns PS01123 Thermonuclease family signature 1. 63 88 - T 11-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 UP17_06775 1b7409a8eba05ba4bf08e7c02688cb8a 264 SUPERFAMILY SSF50199 50 189 2.22E-38 T 11-10-2018 UP17_06775 1b7409a8eba05ba4bf08e7c02688cb8a 264 SMART SM00318 52 186 6.7E-40 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 UP17_06775 1b7409a8eba05ba4bf08e7c02688cb8a 264 Gene3D G3DSA:2.40.50.90 45 192 1.4E-52 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily UP17_20035 fffcb9bc7644724f2f121dc9e3f7427c 884 Pfam PF10593 Z1 domain 408 635 1.3E-75 T 11-10-2018 IPR018310 Putative endonuclease, Z1 domain UP17_10385 067f2d830552568b8f39eecd8941fc23 103 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 103 43.524 T 11-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UP17_10385 067f2d830552568b8f39eecd8941fc23 103 Pfam PF02553 Cobalt transport protein component CbiN 5 70 6.9E-31 T 11-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UP17_10385 067f2d830552568b8f39eecd8941fc23 103 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 84 5.6E-32 T 11-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UP17_15850 ba432cebc72032c281d0bc9967c130b4 219 Pfam PF00877 NlpC/P60 family 112 216 3.1E-30 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_15850 ba432cebc72032c281d0bc9967c130b4 219 Gene3D G3DSA:1.10.101.10 26 95 2.4E-19 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_15850 ba432cebc72032c281d0bc9967c130b4 219 SUPERFAMILY SSF47090 27 96 1.6E-20 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_15850 ba432cebc72032c281d0bc9967c130b4 219 Gene3D G3DSA:3.90.1720.10 96 219 2.0E-39 T 11-10-2018 UP17_15850 ba432cebc72032c281d0bc9967c130b4 219 SUPERFAMILY SSF54001 95 217 2.22E-38 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_15850 ba432cebc72032c281d0bc9967c130b4 219 Pfam PF01471 Putative peptidoglycan binding domain 36 93 4.5E-15 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_22110 166e54ceb9e13f2dbe5ba05e1704dc41 256 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_22110 166e54ceb9e13f2dbe5ba05e1704dc41 256 Gene3D G3DSA:3.40.50.300 2 249 5.0E-60 T 11-10-2018 UP17_22110 166e54ceb9e13f2dbe5ba05e1704dc41 256 SMART SM00382 32 212 4.5E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_22110 166e54ceb9e13f2dbe5ba05e1704dc41 256 Pfam PF00005 ABC transporter 23 163 2.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_22110 166e54ceb9e13f2dbe5ba05e1704dc41 256 SUPERFAMILY SSF52540 4 220 1.25E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_00760 33d098421ef2b601b25eb78440a29e10 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.171 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00760 33d098421ef2b601b25eb78440a29e10 132 SUPERFAMILY SSF56047 2 132 1.57E-49 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00760 33d098421ef2b601b25eb78440a29e10 132 Gene3D G3DSA:3.30.1370.30 4 74 3.7E-34 T 11-10-2018 UP17_00760 33d098421ef2b601b25eb78440a29e10 132 Pfam PF00410 Ribosomal protein S8 5 132 8.2E-55 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00760 33d098421ef2b601b25eb78440a29e10 132 Gene3D G3DSA:3.30.1490.10 75 132 1.1E-25 T 11-10-2018 UP17_00760 33d098421ef2b601b25eb78440a29e10 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00965 3bbe5e9d462ba9d9d4bd87f857e43b23 61 Gene3D G3DSA:1.20.58.990 1 54 4.7E-9 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 UP17_00965 3bbe5e9d462ba9d9d4bd87f857e43b23 61 SUPERFAMILY SSF140500 1 51 9.68E-13 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 UP17_00965 3bbe5e9d462ba9d9d4bd87f857e43b23 61 Pfam PF09388 Spo0E like sporulation regulatory protein 6 46 1.7E-11 T 11-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 UP17_21240 435d4e62ae25c268eec872610670f6d7 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.1E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_21240 435d4e62ae25c268eec872610670f6d7 442 SUPERFAMILY SSF56672 36 400 4.45E-55 T 11-10-2018 UP17_21240 435d4e62ae25c268eec872610670f6d7 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 3.4E-45 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_21240 435d4e62ae25c268eec872610670f6d7 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 2.9E-110 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_05665 1a35d79625c1cc1e77a22603762ba6bc 412 Gene3D G3DSA:3.30.2010.10 195 276 7.1E-24 T 11-10-2018 UP17_05665 1a35d79625c1cc1e77a22603762ba6bc 412 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 23 195 5.4E-18 T 11-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 UP17_05665 1a35d79625c1cc1e77a22603762ba6bc 412 Pfam PF01435 Peptidase family M48 199 406 2.0E-32 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 UP17_04335 c96abd769339d4f3006e9aae44046c44 399 Gene3D G3DSA:3.50.50.60 8 325 2.4E-101 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_04335 c96abd769339d4f3006e9aae44046c44 399 SUPERFAMILY SSF51905 121 261 2.81E-24 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_04335 c96abd769339d4f3006e9aae44046c44 399 SUPERFAMILY SSF51905 6 152 3.11E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_04335 c96abd769339d4f3006e9aae44046c44 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 307 6.2E-18 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 UP17_04335 c96abd769339d4f3006e9aae44046c44 399 Gene3D G3DSA:3.50.50.60 123 261 2.4E-101 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_07260 0cea37d6616efe360a82abe81fea9d0f 130 Pfam PF11877 Protein of unknown function (DUF3397) 10 119 5.3E-25 T 11-10-2018 IPR024515 Protein of unknown function DUF3397 UP17_07260 0cea37d6616efe360a82abe81fea9d0f 130 PIRSF PIRSF030092 1 128 3.0E-29 T 11-10-2018 IPR016945 Uncharacterised conserved protein UCP030092 UP17_10335 295d33949aea646b6187c7069cbfdff0 106 SUPERFAMILY SSF103481 4 104 2.48E-18 T 11-10-2018 UP17_10335 295d33949aea646b6187c7069cbfdff0 106 Pfam PF00893 Small Multidrug Resistance protein 1 92 3.2E-25 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 UP17_10335 295d33949aea646b6187c7069cbfdff0 106 Gene3D G3DSA:1.10.3730.20 1 106 2.8E-30 T 11-10-2018 UP17_05675 face8b0db16b24515027317439d0f6f9 78 SMART SM00914 33 69 9.2E-9 T 11-10-2018 IPR014957 IDEAL domain UP17_05675 face8b0db16b24515027317439d0f6f9 78 Pfam PF08858 IDEAL domain 36 68 2.8E-11 T 11-10-2018 IPR014957 IDEAL domain UP17_05675 face8b0db16b24515027317439d0f6f9 78 Gene3D G3DSA:4.10.810.10 17 77 1.4E-10 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 UP17_24040 79c669144ccc87a533859a7faf9e782a 279 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 199 274 2.1E-16 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain UP17_24040 79c669144ccc87a533859a7faf9e782a 279 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site UP17_24040 79c669144ccc87a533859a7faf9e782a 279 SUPERFAMILY SSF117143 116 236 2.35E-14 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like UP17_24040 79c669144ccc87a533859a7faf9e782a 279 Pfam PF00460 Flagella basal body rod protein 5 35 1.5E-8 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UP17_24040 79c669144ccc87a533859a7faf9e782a 279 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 166 8.9E-28 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G UP17_05870 ffbc0050c3b7daae39a2c7b7d2091655 257 Pfam PF00696 Amino acid kinase family 3 233 2.0E-40 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 UP17_05870 ffbc0050c3b7daae39a2c7b7d2091655 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 231 1.4E-78 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_05870 ffbc0050c3b7daae39a2c7b7d2091655 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 248 38.991 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_05870 ffbc0050c3b7daae39a2c7b7d2091655 257 PIRSF PIRSF000728 1 248 6.2E-83 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 UP17_05870 ffbc0050c3b7daae39a2c7b7d2091655 257 Gene3D G3DSA:3.40.1160.10 1 238 8.8E-72 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_05870 ffbc0050c3b7daae39a2c7b7d2091655 257 SUPERFAMILY SSF53633 1 251 8.51E-63 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_05600 34931fd7a5934cc0c7a40373c937ac75 402 PIRSF PIRSF037259 1 402 1.4E-121 T 11-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 UP17_05600 34931fd7a5934cc0c7a40373c937ac75 402 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 385 9.0E-122 T 11-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 UP17_02675 3a64f06d33b266b28a944db5860834f1 187 SUPERFAMILY SSF56349 8 178 5.89E-29 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_02675 3a64f06d33b266b28a944db5860834f1 187 Gene3D G3DSA:1.10.443.10 8 173 5.9E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 UP17_02675 3a64f06d33b266b28a944db5860834f1 187 Pfam PF00589 Phage integrase family 11 172 7.0E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 UP17_20265 12b448788d2661c943ba3cec14e3579d 138 SUPERFAMILY SSF54593 9 132 1.03E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_20265 12b448788d2661c943ba3cec14e3579d 138 Gene3D G3DSA:3.10.180.10 1 138 4.5E-55 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_20265 12b448788d2661c943ba3cec14e3579d 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 127 4.5E-8 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_25275 6c27afe693c63e8203f323422c770620 134 Gene3D G3DSA:1.20.120.580 2 134 1.5E-16 T 11-10-2018 IPR037038 Bsu32300-like superfamily UP17_25275 6c27afe693c63e8203f323422c770620 134 Pfam PF01934 Protein of unknown function DUF86 17 131 4.9E-23 T 11-10-2018 IPR008201 Protein of unknown function DUF86 UP17_12940 4183d6f787e44293d4351772177bdfcf 258 Gene3D G3DSA:3.40.1010.10 1 117 1.6E-43 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 UP17_12940 4183d6f787e44293d4351772177bdfcf 258 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 238 2.2E-101 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_12940 4183d6f787e44293d4351772177bdfcf 258 Gene3D G3DSA:3.30.950.10 118 258 3.5E-52 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 UP17_12940 4183d6f787e44293d4351772177bdfcf 258 SUPERFAMILY SSF53790 1 246 9.68E-83 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 UP17_12940 4183d6f787e44293d4351772177bdfcf 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 213 2.9E-47 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 UP17_12940 4183d6f787e44293d4351772177bdfcf 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_12940 4183d6f787e44293d4351772177bdfcf 258 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 UP17_08015 254586a97e7d6808d95925995b697a81 316 Pfam PF01687 Riboflavin kinase 187 307 7.6E-36 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 UP17_08015 254586a97e7d6808d95925995b697a81 316 PIRSF PIRSF004491 3 316 9.8E-99 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 UP17_08015 254586a97e7d6808d95925995b697a81 316 Gene3D G3DSA:3.40.50.620 6 189 1.7E-52 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold UP17_08015 254586a97e7d6808d95925995b697a81 316 SUPERFAMILY SSF82114 176 314 2.62E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 UP17_08015 254586a97e7d6808d95925995b697a81 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 311 1.4E-89 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 UP17_08015 254586a97e7d6808d95925995b697a81 316 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 87 2.0E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 UP17_08015 254586a97e7d6808d95925995b697a81 316 SUPERFAMILY SSF52374 21 178 1.83E-28 T 11-10-2018 UP17_08015 254586a97e7d6808d95925995b697a81 316 Pfam PF06574 FAD synthetase 19 169 4.0E-48 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 UP17_08015 254586a97e7d6808d95925995b697a81 316 SMART SM00904 185 312 2.5E-55 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 UP17_08015 254586a97e7d6808d95925995b697a81 316 Gene3D G3DSA:2.40.30.30 191 310 2.1E-41 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 UP17_24405 34c79e7194bd7f199e1f53ce3ca481b7 73 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 8 73 3.0E-4 T 11-10-2018 UP17_24405 34c79e7194bd7f199e1f53ce3ca481b7 73 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 5.0E-11 T 11-10-2018 IPR009910 Protein of unknown function DUF1450 UP17_24405 34c79e7194bd7f199e1f53ce3ca481b7 73 Hamap MF_01863 UPF0741 protein . 1 73 29.199 T 11-10-2018 IPR020880 Protein of unknown function UPF0741 UP17_18690 a179c41b10f17e3cbcca421d0e6b4978 181 Pfam PF14278 Transcriptional regulator C-terminal region 86 159 1.1E-14 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type UP17_18690 a179c41b10f17e3cbcca421d0e6b4978 181 SUPERFAMILY SSF46689 5 72 1.69E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_18690 a179c41b10f17e3cbcca421d0e6b4978 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 59 6.9E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18690 a179c41b10f17e3cbcca421d0e6b4978 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18690 a179c41b10f17e3cbcca421d0e6b4978 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 3.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_18690 a179c41b10f17e3cbcca421d0e6b4978 181 Gene3D G3DSA:1.10.357.10 5 175 4.6E-49 T 11-10-2018 UP17_20600 9c22c0a066aed5972044fc312fdd360b 415 Gene3D G3DSA:2.30.40.10 29 401 1.4E-105 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_20600 9c22c0a066aed5972044fc312fdd360b 415 Pfam PF07969 Amidohydrolase family 161 400 4.8E-17 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_20600 9c22c0a066aed5972044fc312fdd360b 415 SUPERFAMILY SSF51556 68 372 1.13E-70 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_20600 9c22c0a066aed5972044fc312fdd360b 415 SUPERFAMILY SSF51338 25 81 3.12E-8 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_20600 9c22c0a066aed5972044fc312fdd360b 415 Gene3D G3DSA:3.20.20.140 68 362 1.4E-105 T 11-10-2018 UP17_16975 337635a1f90d86fe985600a149de013c 423 Pfam PF16325 Peptidase family U32 C-terminal domain 340 420 5.5E-22 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal UP17_16975 337635a1f90d86fe985600a149de013c 423 Gene3D G3DSA:2.40.30.10 335 423 1.2E-34 T 11-10-2018 UP17_16975 337635a1f90d86fe985600a149de013c 423 Pfam PF01136 Peptidase family U32 94 322 5.5E-87 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 UP17_16975 337635a1f90d86fe985600a149de013c 423 ProSitePatterns PS01276 Peptidase family U32 signature. 179 197 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 UP17_16975 337635a1f90d86fe985600a149de013c 423 SUPERFAMILY SSF102114 18 111 8.24E-5 T 11-10-2018 UP17_19330 314ce5374c63451814d8c03da0e26eb3 412 Gene3D G3DSA:1.25.40.10 247 388 4.7E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_19330 314ce5374c63451814d8c03da0e26eb3 412 Pfam PF12640 UPF0489 domain 5 170 1.7E-8 T 11-10-2018 IPR024131 Uncharacterised protein family UPF0489 UP17_19330 314ce5374c63451814d8c03da0e26eb3 412 SUPERFAMILY SSF48452 262 370 1.43E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_10015 99b29f58efb9733e0bf9f4e45105d890 338 SUPERFAMILY SSF81345 9 336 7.59E-82 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_10015 99b29f58efb9733e0bf9f4e45105d890 338 Pfam PF01032 FecCD transport family 24 336 2.7E-92 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 UP17_10015 99b29f58efb9733e0bf9f4e45105d890 338 Gene3D G3DSA:1.10.3470.10 9 338 2.0E-96 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_07935 f00f287044207cbc503fad6ef49d9514 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 45.191 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 UP17_07935 f00f287044207cbc503fad6ef49d9514 240 SUPERFAMILY SSF53633 5 238 3.4E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_07935 f00f287044207cbc503fad6ef49d9514 240 Pfam PF00696 Amino acid kinase family 7 217 6.1E-29 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 UP17_07935 f00f287044207cbc503fad6ef49d9514 240 Gene3D G3DSA:3.40.1160.10 1 239 1.6E-81 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily UP17_07935 f00f287044207cbc503fad6ef49d9514 240 PIRSF PIRSF005650 1 240 3.8E-99 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 UP17_07935 f00f287044207cbc503fad6ef49d9514 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.4E-103 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 UP17_05845 0da563aacc03ca3970dda2130fd9d41c 102 SUPERFAMILY SSF117916 4 100 7.85E-32 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily UP17_05845 0da563aacc03ca3970dda2130fd9d41c 102 Gene3D G3DSA:3.30.300.130 1 102 3.2E-35 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily UP17_05845 0da563aacc03ca3970dda2130fd9d41c 102 Pfam PF01883 Iron-sulfur cluster assembly protein 7 80 4.1E-20 T 11-10-2018 IPR002744 MIP18 family-like UP17_17250 94598d3cd96cbdf1f24757d00ca2ae6a 225 Gene3D G3DSA:3.40.50.300 1 225 4.0E-79 T 11-10-2018 UP17_17250 94598d3cd96cbdf1f24757d00ca2ae6a 225 SUPERFAMILY SSF52540 42 222 2.13E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17250 94598d3cd96cbdf1f24757d00ca2ae6a 225 Pfam PF13614 AAA domain 42 183 2.8E-16 T 11-10-2018 IPR025669 AAA domain UP17_17250 94598d3cd96cbdf1f24757d00ca2ae6a 225 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 23 223 2.6E-71 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 UP17_21890 d9b86effe45a872b3f1a77b841fbdb5b 423 Pfam PF04346 Ethanolamine utilisation protein, EutH 5 385 2.3E-127 T 11-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 UP17_21890 d9b86effe45a872b3f1a77b841fbdb5b 423 PIRSF PIRSF019466 2 403 6.0E-129 T 11-10-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 UP17_03615 0d9ce69ad860a7afa30323eb1ecc5a4d 297 Gene3D G3DSA:3.40.50.720 2 283 1.1E-61 T 11-10-2018 UP17_03615 0d9ce69ad860a7afa30323eb1ecc5a4d 297 SUPERFAMILY SSF51735 1 291 1.51E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03615 0d9ce69ad860a7afa30323eb1ecc5a4d 297 Pfam PF08338 Domain of unknown function (DUF1731) 244 292 1.6E-11 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 UP17_03615 0d9ce69ad860a7afa30323eb1ecc5a4d 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 122 1.1E-9 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 UP17_03615 0d9ce69ad860a7afa30323eb1ecc5a4d 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 289 4.8E-81 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 Pfam PF00005 ABC transporter 389 536 6.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 Gene3D G3DSA:3.40.50.300 367 612 7.1E-89 T 11-10-2018 UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 SMART SM00382 396 588 2.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 Pfam PF00664 ABC transporter transmembrane region 52 325 2.0E-59 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 SUPERFAMILY SSF90123 39 354 4.05E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 SUPERFAMILY SSF52540 363 605 1.74E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02460 f8d51f8e2e6f1dfd4e4d6693a3966553 613 Gene3D G3DSA:1.20.1560.10 19 357 1.9E-103 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 UP17_08995 8597edced02b19081655a7e61ac566a1 477 PRINTS PR00175 Sodium/alanine symporter signature 405 425 5.9E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_08995 8597edced02b19081655a7e61ac566a1 477 PRINTS PR00175 Sodium/alanine symporter signature 300 318 5.9E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_08995 8597edced02b19081655a7e61ac566a1 477 PRINTS PR00175 Sodium/alanine symporter signature 91 113 5.9E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_08995 8597edced02b19081655a7e61ac566a1 477 PRINTS PR00175 Sodium/alanine symporter signature 345 367 5.9E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_08995 8597edced02b19081655a7e61ac566a1 477 PRINTS PR00175 Sodium/alanine symporter signature 181 199 5.9E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_08995 8597edced02b19081655a7e61ac566a1 477 PRINTS PR00175 Sodium/alanine symporter signature 209 228 5.9E-52 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_08995 8597edced02b19081655a7e61ac566a1 477 Pfam PF01235 Sodium:alanine symporter family 53 448 5.0E-155 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_08995 8597edced02b19081655a7e61ac566a1 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 436 3.2E-149 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_18315 0373db598f3435f7b93efdd9c00b83b7 157 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 129 5.5E-55 T 11-10-2018 IPR014229 Sporulation protein YtfJ UP17_18315 0373db598f3435f7b93efdd9c00b83b7 157 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 120 8.2E-29 T 11-10-2018 IPR014229 Sporulation protein YtfJ UP17_18315 0373db598f3435f7b93efdd9c00b83b7 157 PIRSF PIRSF021377 1 156 2.8E-60 T 11-10-2018 IPR014229 Sporulation protein YtfJ UP17_19345 c3ee65e43b97a9988e08086f8286f54e 628 Gene3D G3DSA:3.80.30.20 293 510 5.6E-14 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe UP17_19345 c3ee65e43b97a9988e08086f8286f54e 628 Pfam PF04055 Radical SAM superfamily 302 457 1.4E-9 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_19345 c3ee65e43b97a9988e08086f8286f54e 628 SMART SM00729 293 506 5.3E-6 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_19345 c3ee65e43b97a9988e08086f8286f54e 628 SUPERFAMILY SSF102114 263 498 2.35E-23 T 11-10-2018 UP17_15730 7eb821bc161c3bd95aa700359df84f41 207 Pfam PF12164 Stage V sporulation protein AA 5 89 4.5E-18 T 11-10-2018 IPR021997 Stage V sporulation protein AA UP17_15730 7eb821bc161c3bd95aa700359df84f41 207 Gene3D G3DSA:2.60.480.10 2 96 8.5E-10 T 11-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily UP17_12985 55b073c4226f994e07e741b09e5f8e0d 199 Pfam PF01174 SNO glutamine amidotransferase family 6 188 3.7E-68 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12985 55b073c4226f994e07e741b09e5f8e0d 199 PIRSF PIRSF005639 1 191 2.3E-73 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12985 55b073c4226f994e07e741b09e5f8e0d 199 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 11-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12985 55b073c4226f994e07e741b09e5f8e0d 199 Gene3D G3DSA:3.40.50.880 1 197 5.6E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_12985 55b073c4226f994e07e741b09e5f8e0d 199 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 185 2.6E-74 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_12985 55b073c4226f994e07e741b09e5f8e0d 199 SUPERFAMILY SSF52317 2 189 1.86E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_12985 55b073c4226f994e07e741b09e5f8e0d 199 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 36.839 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 UP17_17225 942a6fc518c158553dc532871148c298 203 Pfam PF02397 Bacterial sugar transferase 8 186 1.3E-61 T 11-10-2018 IPR003362 Bacterial sugar transferase UP17_21545 0b5fd2e6c30bf0f0f80165e8481a7544 234 Gene3D G3DSA:3.40.50.150 53 228 8.9E-39 T 11-10-2018 UP17_21545 0b5fd2e6c30bf0f0f80165e8481a7544 234 Pfam PF13649 Methyltransferase domain 62 156 7.0E-22 T 11-10-2018 UP17_21545 0b5fd2e6c30bf0f0f80165e8481a7544 234 SUPERFAMILY SSF53335 23 228 3.8E-38 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_23570 775dd63077afb2f27fec8d6a084d1c4a 209 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 144 165 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 UP17_23570 775dd63077afb2f27fec8d6a084d1c4a 209 Gene3D G3DSA:3.40.190.10 96 177 6.2E-77 T 11-10-2018 UP17_23570 775dd63077afb2f27fec8d6a084d1c4a 209 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 5 209 55.467 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 UP17_23570 775dd63077afb2f27fec8d6a084d1c4a 209 Pfam PF01634 ATP phosphoribosyltransferase 55 206 5.1E-48 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 UP17_23570 775dd63077afb2f27fec8d6a084d1c4a 209 Gene3D G3DSA:3.40.190.10 7 200 6.2E-77 T 11-10-2018 UP17_23570 775dd63077afb2f27fec8d6a084d1c4a 209 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 185 7.4E-60 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 UP17_23570 775dd63077afb2f27fec8d6a084d1c4a 209 SUPERFAMILY SSF53850 3 208 8.69E-64 T 11-10-2018 UP17_04410 6ccfd9a3c639335b3f6f057b0142276c 230 Gene3D G3DSA:3.30.240.20 80 152 1.4E-25 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_04410 6ccfd9a3c639335b3f6f057b0142276c 230 Gene3D G3DSA:3.30.240.20 167 226 3.9E-18 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_04410 6ccfd9a3c639335b3f6f057b0142276c 230 Pfam PF04239 Protein of unknown function (DUF421) 88 201 2.3E-33 T 11-10-2018 IPR007353 Protein of unknown function DUF421 UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 Pfam PF00717 Peptidase S24-like 34 101 1.8E-20 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 SUPERFAMILY SSF51306 25 180 1.17E-53 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 175 3.1E-56 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 Gene3D G3DSA:2.10.109.10 57 182 8.7E-47 T 11-10-2018 UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 ProSitePatterns PS00760 Signal peptidases I lysine active site. 79 91 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 135 154 6.7E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 6.7E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 89 6.7E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 UP17_18605 b967618e8e2702646c8c86766d8a95b6 182 ProSitePatterns PS00501 Signal peptidases I serine active site. 36 43 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 UP17_23480 6e4d944014ff5bd84c2dadf86792dee9 344 Gene3D G3DSA:3.40.50.1360 90 340 2.5E-79 T 11-10-2018 UP17_23480 6e4d944014ff5bd84c2dadf86792dee9 344 SUPERFAMILY SSF46785 19 84 1.22E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_23480 6e4d944014ff5bd84c2dadf86792dee9 344 SUPERFAMILY SSF100950 97 338 1.12E-67 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_23480 6e4d944014ff5bd84c2dadf86792dee9 344 Pfam PF04198 Putative sugar-binding domain 92 338 5.1E-69 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 UP17_23480 6e4d944014ff5bd84c2dadf86792dee9 344 Gene3D G3DSA:1.10.10.10 17 89 5.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08415 43b81bdcbbc28b4292d42f28c49cf0f4 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 1.8E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_08415 43b81bdcbbc28b4292d42f28c49cf0f4 122 SUPERFAMILY SSF54593 1 120 4.03E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_08415 43b81bdcbbc28b4292d42f28c49cf0f4 122 Gene3D G3DSA:3.10.180.10 6 120 2.3E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_09440 83790fa7c09f6b6b16beda4808ba4e75 313 Pfam PF04960 Glutaminase 25 311 1.6E-110 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 UP17_09440 83790fa7c09f6b6b16beda4808ba4e75 313 TIGRFAM TIGR03814 Gln_ase: glutaminase A 11 311 8.3E-120 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 UP17_09440 83790fa7c09f6b6b16beda4808ba4e75 313 Gene3D G3DSA:3.40.710.10 6 313 2.7E-114 T 11-10-2018 UP17_09440 83790fa7c09f6b6b16beda4808ba4e75 313 SUPERFAMILY SSF56601 8 311 4.74E-109 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_09440 83790fa7c09f6b6b16beda4808ba4e75 313 Hamap MF_00313 Glutaminase [glsA]. 7 311 44.905 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 Pfam PF04551 GcpE protein 10 351 2.0E-139 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 Gene3D G3DSA:3.20.20.20 1 259 4.2E-110 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 PIRSF PIRSF004640 1 361 3.4E-157 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 Gene3D G3DSA:3.30.413.10 261 359 3.9E-35 T 11-10-2018 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.837 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 SUPERFAMILY SSF56014 261 362 5.23E-15 T 11-10-2018 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 SUPERFAMILY SSF51717 15 215 8.63E-18 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 UP17_16560 e02a58df1aa3369941ad2b7fd9860fb5 373 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 1.3E-131 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 UP17_07950 23a7ffc5310679ad2ea0d47aa3d09298 265 SUPERFAMILY SSF103481 85 165 4.32E-5 T 11-10-2018 UP17_07950 23a7ffc5310679ad2ea0d47aa3d09298 265 Pfam PF01148 Cytidylyltransferase family 2 263 2.4E-73 T 11-10-2018 UP17_23450 4b99b2ec22b2c57f4388b907e47027ee 274 Gene3D G3DSA:3.30.1380.10 53 268 1.1E-80 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 UP17_23450 4b99b2ec22b2c57f4388b907e47027ee 274 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 118 245 3.2E-43 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 UP17_23450 4b99b2ec22b2c57f4388b907e47027ee 274 SUPERFAMILY SSF55166 105 253 7.85E-38 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 UP17_12805 9d30ba4840981cdf43e9811591e9ddea 141 Gene3D G3DSA:3.10.180.10 9 141 1.1E-41 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_12805 9d30ba4840981cdf43e9811591e9ddea 141 SUPERFAMILY SSF54593 1 137 6.22E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_12805 9d30ba4840981cdf43e9811591e9ddea 141 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 135 9.0E-11 T 11-10-2018 IPR028973 PhnB-like UP17_15030 3a62cb2d58b93efff804e2bbfcd94568 302 Pfam PF00892 EamA-like transporter family 147 286 1.5E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_15030 3a62cb2d58b93efff804e2bbfcd94568 302 Pfam PF00892 EamA-like transporter family 6 138 1.5E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_15030 3a62cb2d58b93efff804e2bbfcd94568 302 SUPERFAMILY SSF103481 213 287 9.68E-11 T 11-10-2018 UP17_15030 3a62cb2d58b93efff804e2bbfcd94568 302 SUPERFAMILY SSF103481 39 142 1.01E-11 T 11-10-2018 UP17_24570 e89e41d718aa48b9f6f58697744b476b 357 SUPERFAMILY SSF53383 5 349 3.3E-70 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_24570 e89e41d718aa48b9f6f58697744b476b 357 Gene3D G3DSA:3.90.1150.10 25 345 3.9E-102 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_24570 e89e41d718aa48b9f6f58697744b476b 357 Pfam PF00155 Aminotransferase class I and II 24 345 4.9E-37 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_24570 e89e41d718aa48b9f6f58697744b476b 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 211 224 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 UP17_24570 e89e41d718aa48b9f6f58697744b476b 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 345 4.6E-94 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 UP17_24570 e89e41d718aa48b9f6f58697744b476b 357 Gene3D G3DSA:3.40.640.10 37 259 3.9E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_02830 c8fb01e4138559f812aa609ff4b4ba52 319 SUPERFAMILY SSF51735 1 307 1.05E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_02830 c8fb01e4138559f812aa609ff4b4ba52 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 240 1.7E-25 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 UP17_02830 c8fb01e4138559f812aa609ff4b4ba52 319 Gene3D G3DSA:3.40.50.720 1 311 3.7E-104 T 11-10-2018 UP17_14915 4b1d6c02d24e9ffb2b7742b6ae483fc2 128 Pfam PF03610 PTS system fructose IIA component 5 105 1.2E-19 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 UP17_14915 4b1d6c02d24e9ffb2b7742b6ae483fc2 128 Gene3D G3DSA:3.40.50.510 1 127 1.2E-31 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 UP17_14915 4b1d6c02d24e9ffb2b7742b6ae483fc2 128 SUPERFAMILY SSF53062 3 114 2.88E-25 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 UP17_14150 fd2997822e17cb6d33d7dc0b73cecd16 209 SMART SM01007 9 196 7.2E-35 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal UP17_14150 fd2997822e17cb6d33d7dc0b73cecd16 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 207 90.917 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 UP17_14150 fd2997822e17cb6d33d7dc0b73cecd16 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 12 198 4.5E-61 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 UP17_14150 fd2997822e17cb6d33d7dc0b73cecd16 209 SUPERFAMILY SSF53639 6 200 1.26E-42 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily UP17_14150 fd2997822e17cb6d33d7dc0b73cecd16 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 196 3.7E-36 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal UP17_14150 fd2997822e17cb6d33d7dc0b73cecd16 209 Gene3D G3DSA:3.40.225.10 5 205 5.4E-46 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily UP17_10405 0d11182ca5bc297d72fb5b2d0e7079b7 303 Pfam PF01903 CbiX 9 114 6.8E-22 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 UP17_10405 0d11182ca5bc297d72fb5b2d0e7079b7 303 Pfam PF01903 CbiX 138 242 3.6E-24 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 UP17_10405 0d11182ca5bc297d72fb5b2d0e7079b7 303 Gene3D G3DSA:3.40.50.1400 1 120 5.4E-23 T 11-10-2018 UP17_10405 0d11182ca5bc297d72fb5b2d0e7079b7 303 Gene3D G3DSA:3.40.50.1400 127 250 8.7E-22 T 11-10-2018 UP17_10405 0d11182ca5bc297d72fb5b2d0e7079b7 303 SUPERFAMILY SSF53800 1 248 1.31E-52 T 11-10-2018 UP17_21910 2f666dc1ebbda3c92cf0bc42aa7f924f 231 SUPERFAMILY SSF116726 134 215 1.05E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_08535 a5d65fd6722fa2a01bc4096927dbb66e 165 SUPERFAMILY SSF51261 5 161 1.19E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_08535 a5d65fd6722fa2a01bc4096927dbb66e 165 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 17 137 4.9E-46 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_08535 a5d65fd6722fa2a01bc4096927dbb66e 165 Gene3D G3DSA:2.70.70.10 5 163 1.5E-56 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_08535 a5d65fd6722fa2a01bc4096927dbb66e 165 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 16 139 7.0E-51 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_08535 a5d65fd6722fa2a01bc4096927dbb66e 165 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 79 91 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 2.2E-12 T 11-10-2018 UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 2.2E-12 T 11-10-2018 UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 303 327 2.2E-12 T 11-10-2018 UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 2.2E-12 T 11-10-2018 UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 Pfam PF07690 Major Facilitator Superfamily 19 410 2.8E-55 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 482 8.1E-125 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 SUPERFAMILY SSF103473 10 486 2.22E-65 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_19570 c875dd3bddbecc0030e22c136f64e043 501 Gene3D G3DSA:1.20.1720.10 15 224 7.3E-40 T 11-10-2018 UP17_21065 f96453e9f22659317d7ccc7f48e1ff5d 274 SUPERFAMILY SSF56281 61 234 5.08E-26 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_21065 f96453e9f22659317d7ccc7f48e1ff5d 274 SMART SM00849 75 239 6.0E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_21065 f96453e9f22659317d7ccc7f48e1ff5d 274 Gene3D G3DSA:3.60.15.10 56 266 6.5E-10 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_21065 f96453e9f22659317d7ccc7f48e1ff5d 274 Pfam PF00753 Metallo-beta-lactamase superfamily 75 202 8.0E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 308 688 4.2E-6 T 11-10-2018 UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 SUPERFAMILY SSF52540 303 747 2.44E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1163 0.0 T 11-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 Gene3D G3DSA:3.40.50.300 1 158 9.5E-35 T 11-10-2018 UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 Gene3D G3DSA:3.40.50.300 276 421 8.8E-28 T 11-10-2018 UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 Gene3D G3DSA:3.40.50.300 505 694 1.1E-38 T 11-10-2018 UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 Pfam PF12705 PD-(D/E)XK nuclease superfamily 789 1132 5.6E-59 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type UP17_05700 be8ccda9be024147b1f311fe406e3e71 1165 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1163 60.705 T 11-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 UP17_02840 edf8dc399137d5733b9e61c3ab9986e2 97 SUPERFAMILY SSF47789 43 96 3.66E-10 T 11-10-2018 UP17_02840 edf8dc399137d5733b9e61c3ab9986e2 97 Gene3D G3DSA:1.10.150.20 40 97 4.5E-12 T 11-10-2018 UP17_02840 edf8dc399137d5733b9e61c3ab9986e2 97 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 43 89 2.1E-5 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 UP17_07985 df48f9638732d2abb0ba3193ea656edc 91 SUPERFAMILY SSF64376 5 88 1.57E-28 T 11-10-2018 IPR035931 YlxR-like superfamily UP17_07985 df48f9638732d2abb0ba3193ea656edc 91 Pfam PF04296 Protein of unknown function (DUF448) 10 82 2.3E-27 T 11-10-2018 IPR007393 Domain of unknown function DUF448 UP17_07985 df48f9638732d2abb0ba3193ea656edc 91 Gene3D G3DSA:3.30.1230.10 1 91 7.0E-35 T 11-10-2018 IPR035931 YlxR-like superfamily UP17_13285 797fa6406d7a40971b953ba7e494d19d 305 SUPERFAMILY SSF103481 41 141 5.36E-11 T 11-10-2018 UP17_13285 797fa6406d7a40971b953ba7e494d19d 305 SUPERFAMILY SSF103481 184 286 6.34E-12 T 11-10-2018 UP17_13285 797fa6406d7a40971b953ba7e494d19d 305 Pfam PF00892 EamA-like transporter family 151 286 6.2E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_13285 797fa6406d7a40971b953ba7e494d19d 305 Pfam PF00892 EamA-like transporter family 6 138 3.9E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_25200 dd3796a5fa1fecbbe3d379d2c4e2a907 424 Pfam PF01548 Transposase 23 183 3.0E-33 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 UP17_25200 dd3796a5fa1fecbbe3d379d2c4e2a907 424 Pfam PF02371 Transposase IS116/IS110/IS902 family 291 375 6.0E-17 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 UP17_02290 91ec3a2026737d687bacaa5997bf61bb 429 SUPERFAMILY SSF53850 22 426 2.74E-53 T 11-10-2018 UP17_02290 91ec3a2026737d687bacaa5997bf61bb 429 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 UP17_02290 91ec3a2026737d687bacaa5997bf61bb 429 Pfam PF13416 Bacterial extracellular solute-binding protein 55 358 9.0E-37 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein UP17_02290 91ec3a2026737d687bacaa5997bf61bb 429 Gene3D G3DSA:3.40.190.10 143 416 2.5E-64 T 11-10-2018 UP17_02290 91ec3a2026737d687bacaa5997bf61bb 429 Gene3D G3DSA:3.40.190.10 56 362 2.5E-64 T 11-10-2018 UP17_10505 317354ea0e7253f717220efc6f03ace7 153 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 12 151 5.0E-31 T 11-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like UP17_10505 317354ea0e7253f717220efc6f03ace7 153 SUPERFAMILY SSF55298 8 151 5.65E-49 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_10505 317354ea0e7253f717220efc6f03ace7 153 Gene3D G3DSA:3.30.1330.40 1 152 2.3E-56 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 Pfam PF01416 tRNA pseudouridine synthase 144 245 1.0E-30 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 Pfam PF01416 tRNA pseudouridine synthase 9 104 2.7E-7 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 Gene3D G3DSA:3.30.70.660 107 243 5.8E-50 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 Gene3D G3DSA:3.30.70.580 1 106 6.8E-33 T 11-10-2018 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 PIRSF PIRSF001430 1 246 1.1E-83 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 SUPERFAMILY SSF55120 1 245 3.45E-85 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 36.173 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_00845 9ae3ae8a4c285cc7b8bd7f1069020fcf 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 240 3.2E-67 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_17095 a8f2cea897fc3d80fb1ee1c013d8b7c4 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 5.8E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_17095 a8f2cea897fc3d80fb1ee1c013d8b7c4 125 Gene3D G3DSA:1.10.10.10 7 125 4.3E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_17095 a8f2cea897fc3d80fb1ee1c013d8b7c4 125 SMART SM00345 15 74 6.1E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_17095 a8f2cea897fc3d80fb1ee1c013d8b7c4 125 SUPERFAMILY SSF46785 4 78 1.4E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_19320 ef2e1608b53fa9e52153960cc48d30e1 234 SMART SM00558 97 234 1.4E-9 T 11-10-2018 IPR003347 JmjC domain UP17_19320 ef2e1608b53fa9e52153960cc48d30e1 234 Pfam PF13621 Cupin-like domain 18 232 1.1E-23 T 11-10-2018 UP17_19320 ef2e1608b53fa9e52153960cc48d30e1 234 Gene3D G3DSA:2.60.120.650 1 228 1.4E-50 T 11-10-2018 UP17_19320 ef2e1608b53fa9e52153960cc48d30e1 234 SUPERFAMILY SSF51197 17 230 2.2E-41 T 11-10-2018 UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 SUPERFAMILY SSF52768 13 310 1.13E-96 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 Gene3D G3DSA:3.40.800.10 2 323 1.4E-104 T 11-10-2018 UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 Pfam PF00491 Arginase family 35 305 2.7E-83 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 ProSitePatterns PS01053 Arginase family signature. 237 258 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 PRINTS PR00116 Arginase signature 234 263 4.0E-13 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 PRINTS PR00116 Arginase signature 121 136 4.0E-13 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 PIRSF PIRSF036979 13 313 1.5E-96 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 UP17_04290 76c91c4eff92602cc8ad47038ce389ad 332 TIGRFAM TIGR01230 agmatinase: agmatinase 30 307 1.1E-66 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 UP17_06330 562b4a1b9679413b8fd5b2d5a2a0256e 281 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 18 281 39.234 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_06330 562b4a1b9679413b8fd5b2d5a2a0256e 281 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 18 281 1.3E-122 T 11-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 UP17_06330 562b4a1b9679413b8fd5b2d5a2a0256e 281 SUPERFAMILY SSF140959 24 281 1.06E-98 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_06330 562b4a1b9679413b8fd5b2d5a2a0256e 281 Pfam PF03301 Tryptophan 2,3-dioxygenase 195 280 4.2E-25 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_06330 562b4a1b9679413b8fd5b2d5a2a0256e 281 Pfam PF03301 Tryptophan 2,3-dioxygenase 16 149 7.4E-42 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 UP17_06330 562b4a1b9679413b8fd5b2d5a2a0256e 281 Gene3D G3DSA:1.20.58.480 22 281 2.4E-95 T 11-10-2018 UP17_07470 1f03a20f4df14604423bb1427981e51a 573 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 443 6.5E-159 T 11-10-2018 UP17_07470 1f03a20f4df14604423bb1427981e51a 573 Gene3D G3DSA:2.30.310.10 1 167 1.4E-67 T 11-10-2018 UP17_07470 1f03a20f4df14604423bb1427981e51a 573 Gene3D G3DSA:3.40.970.40 242 289 1.9E-16 T 11-10-2018 UP17_07470 1f03a20f4df14604423bb1427981e51a 573 Gene3D G3DSA:1.10.8.50 168 236 1.2E-24 T 11-10-2018 UP17_07470 1f03a20f4df14604423bb1427981e51a 573 Pfam PF05670 Domain of unknown function (DUF814) 456 538 4.6E-28 T 11-10-2018 IPR008532 Domain of unknown function DUF814 UP17_13545 28e15f91b77b7a0a8ee63f54037c8a11 326 Pfam PF12679 ABC-2 family transporter protein 3 325 3.3E-22 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 UP17_04225 64720cbac8f21677171b29b644de8cd7 530 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 47 505 2.4E-189 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_04225 64720cbac8f21677171b29b644de8cd7 530 PIRSF PIRSF005690 32 520 2.5E-180 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_03535 aa5fd0f5877af081ec79a1a4288bbdd3 297 Gene3D G3DSA:3.40.50.1820 6 297 1.1E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_03535 aa5fd0f5877af081ec79a1a4288bbdd3 297 Pfam PF07859 alpha/beta hydrolase fold 56 264 1.8E-24 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 UP17_03535 aa5fd0f5877af081ec79a1a4288bbdd3 297 SUPERFAMILY SSF53474 22 295 4.68E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_17085 0deb6796383cc3642a5b4854edb25c45 402 SUPERFAMILY SSF58104 260 342 8.76E-5 T 11-10-2018 UP17_17085 0deb6796383cc3642a5b4854edb25c45 402 ProDom PD210561 YWRJ 10 139 7.0E-4 T 11-10-2018 IPR020173 Uncharacterised protein family YwrJ UP17_11165 e1ed571aa60c05e1943cedc031a62764 142 ProDom PD085159 YWQH COILED COIL 1 138 5.0E-25 T 11-10-2018 IPR020326 Uncharacterised protein family YwqH UP17_11165 e1ed571aa60c05e1943cedc031a62764 142 Pfam PF16888 Domain of unknown function (DUF5082) 13 104 2.9E-10 T 11-10-2018 IPR031681 Protein of unknown function DUF5082 UP17_12235 783eaf4c878ff1ba5a26e369e000e4a5 392 Pfam PF03069 Acetamidase/Formamidase family 8 386 9.0E-175 T 11-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 UP17_12235 783eaf4c878ff1ba5a26e369e000e4a5 392 SUPERFAMILY SSF141130 19 386 3.27E-75 T 11-10-2018 UP17_12235 783eaf4c878ff1ba5a26e369e000e4a5 392 Gene3D G3DSA:2.60.120.580 195 282 5.3E-21 T 11-10-2018 UP17_12235 783eaf4c878ff1ba5a26e369e000e4a5 392 Gene3D G3DSA:2.60.120.580 10 149 1.5E-14 T 11-10-2018 UP17_09960 dbab8ec76ce8bb2b6b59eeda4e647afb 216 Pfam PF07730 Histidine kinase 23 86 1.0E-8 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 UP17_09960 dbab8ec76ce8bb2b6b59eeda4e647afb 216 Gene3D G3DSA:3.30.565.10 92 215 9.2E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_09960 dbab8ec76ce8bb2b6b59eeda4e647afb 216 SUPERFAMILY SSF55874 90 215 2.88E-12 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_24305 ba836ad1411dadd3243354f644440998 193 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 192 14.72 T 11-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 UP17_24305 ba836ad1411dadd3243354f644440998 193 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 93 8.9E-33 T 11-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 UP17_24305 ba836ad1411dadd3243354f644440998 193 Gene3D G3DSA:1.10.10.1250 2 82 2.9E-31 T 11-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily UP17_24305 ba836ad1411dadd3243354f644440998 193 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 3.7E-8 T 11-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 UP17_21695 c11c63a4888a2de417c742a928dd24ca 139 SUPERFAMILY SSF46785 4 137 1.51E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_21695 c11c63a4888a2de417c742a928dd24ca 139 Gene3D G3DSA:1.10.10.10 1 139 1.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21695 c11c63a4888a2de417c742a928dd24ca 139 Pfam PF01047 MarR family 33 87 2.6E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_21695 c11c63a4888a2de417c742a928dd24ca 139 SMART SM00347 24 123 3.4E-25 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_21695 c11c63a4888a2de417c742a928dd24ca 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.0E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_21695 c11c63a4888a2de417c742a928dd24ca 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.0E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_21695 c11c63a4888a2de417c742a928dd24ca 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 1.0E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_05110 abb31b373f7dd11ec7fec688ca6d3cd6 150 Pfam PF00583 Acetyltransferase (GNAT) family 33 115 2.7E-17 T 11-10-2018 IPR000182 GNAT domain UP17_05110 abb31b373f7dd11ec7fec688ca6d3cd6 150 SUPERFAMILY SSF55729 15 147 1.89E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_05110 abb31b373f7dd11ec7fec688ca6d3cd6 150 Gene3D G3DSA:3.40.630.30 1 150 6.2E-49 T 11-10-2018 UP17_09995 6f45716d115ad94f9d1f54841735eda2 209 PIRSF PIRSF006324 1 209 1.2E-61 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_09995 6f45716d115ad94f9d1f54841735eda2 209 Pfam PF01810 LysE type translocator 13 206 7.5E-31 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_09995 6f45716d115ad94f9d1f54841735eda2 209 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 17 207 3.8E-60 T 11-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 UP17_04920 cc5f60775951ce8fc5074bae2006ad4f 165 Gene3D G3DSA:3.30.300.130 3 103 1.9E-27 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily UP17_04920 cc5f60775951ce8fc5074bae2006ad4f 165 Pfam PF01883 Iron-sulfur cluster assembly protein 9 81 1.6E-19 T 11-10-2018 IPR002744 MIP18 family-like UP17_04920 cc5f60775951ce8fc5074bae2006ad4f 165 SUPERFAMILY SSF117916 6 101 6.32E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily UP17_04920 cc5f60775951ce8fc5074bae2006ad4f 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 18 160 5.0E-53 T 11-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 SUPERFAMILY SSF103473 9 497 8.37E-73 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 483 3.2E-71 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 Gene3D G3DSA:1.20.1720.10 16 225 7.0E-59 T 11-10-2018 UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 Gene3D G3DSA:1.20.1250.20 268 502 1.8E-22 T 11-10-2018 UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 Pfam PF07690 Major Facilitator Superfamily 20 412 4.9E-55 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 1.1E-10 T 11-10-2018 UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 402 421 1.1E-10 T 11-10-2018 UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 1.1E-10 T 11-10-2018 UP17_06905 628b3705e7d6816ea044e3d7fbb7c67c 504 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 1.1E-10 T 11-10-2018 UP17_05725 d0b7caf0acdd74903c33a1b4fa68d7c0 135 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 6 118 3.0E-6 T 11-10-2018 IPR024496 Spore germination protein GerPE UP17_05725 d0b7caf0acdd74903c33a1b4fa68d7c0 135 Pfam PF10970 Spore germination protein GerPE 5 120 6.3E-30 T 11-10-2018 IPR024496 Spore germination protein GerPE UP17_01725 093b9c2a908079d222ea489c79b06d8a 404 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 230 397 2.9E-36 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_01725 093b9c2a908079d222ea489c79b06d8a 404 Gene3D G3DSA:3.30.300.210 246 400 2.0E-45 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_01725 093b9c2a908079d222ea489c79b06d8a 404 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 13 399 1.5E-94 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_03635 0627e30e070d503d62d6991e5e093534 159 SUPERFAMILY SSF54001 37 158 2.5E-35 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily UP17_03635 0627e30e070d503d62d6991e5e093534 159 Pfam PF00877 NlpC/P60 family 50 155 7.2E-26 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain UP17_03635 0627e30e070d503d62d6991e5e093534 159 Gene3D G3DSA:3.90.1720.10 29 159 8.1E-38 T 11-10-2018 UP17_23845 fc4f98a75e4fb5a81533c3ac9069ffbb 388 Pfam PF00534 Glycosyl transferases group 1 192 363 1.4E-34 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_23845 fc4f98a75e4fb5a81533c3ac9069ffbb 388 Gene3D G3DSA:3.40.50.2000 11 383 1.4E-67 T 11-10-2018 UP17_23845 fc4f98a75e4fb5a81533c3ac9069ffbb 388 SUPERFAMILY SSF53756 3 388 5.23E-70 T 11-10-2018 UP17_23845 fc4f98a75e4fb5a81533c3ac9069ffbb 388 Gene3D G3DSA:3.40.50.2000 179 366 1.4E-67 T 11-10-2018 UP17_23845 fc4f98a75e4fb5a81533c3ac9069ffbb 388 Pfam PF13439 Glycosyltransferase Family 4 15 182 1.3E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 UP17_18940 52768b4057466ad4bc445b2da0123d17 149 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 10 139 2.4E-46 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 UP17_18940 52768b4057466ad4bc445b2da0123d17 149 Pfam PF14102 Capsule biosynthesis CapC 12 128 2.9E-39 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 UP17_18940 52768b4057466ad4bc445b2da0123d17 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 2.9E-44 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 UP17_18940 52768b4057466ad4bc445b2da0123d17 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 88 101 2.9E-44 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 UP17_18940 52768b4057466ad4bc445b2da0123d17 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 2.9E-44 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 UP17_18940 52768b4057466ad4bc445b2da0123d17 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 2.9E-44 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 UP17_18940 52768b4057466ad4bc445b2da0123d17 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 2.9E-44 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 UP17_09890 5531e996e8866039a85332ab9d2dbf58 374 Gene3D G3DSA:3.30.9.10 59 316 1.5E-126 T 11-10-2018 UP17_09890 5531e996e8866039a85332ab9d2dbf58 374 SUPERFAMILY SSF51905 2 373 6.15E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_09890 5531e996e8866039a85332ab9d2dbf58 374 SUPERFAMILY SSF54373 217 316 1.57E-19 T 11-10-2018 UP17_09890 5531e996e8866039a85332ab9d2dbf58 374 Gene3D G3DSA:3.50.50.60 4 360 1.5E-126 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_09890 5531e996e8866039a85332ab9d2dbf58 374 Pfam PF01266 FAD dependent oxidoreductase 4 355 2.4E-48 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UP17_08735 d71a46dcfe208b2322097d669fd32a9f 186 Gene3D G3DSA:3.40.50.360 2 183 1.4E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_08735 d71a46dcfe208b2322097d669fd32a9f 186 SUPERFAMILY SSF52218 5 179 2.79E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_08735 d71a46dcfe208b2322097d669fd32a9f 186 Pfam PF03358 NADPH-dependent FMN reductase 5 147 2.3E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 UP17_08530 6f80786ca1727ec3f40ce4dfe51096ac 324 Pfam PF00294 pfkB family carbohydrate kinase 1 312 2.0E-74 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB UP17_08530 6f80786ca1727ec3f40ce4dfe51096ac 324 Gene3D G3DSA:3.40.1190.20 2 323 1.3E-97 T 11-10-2018 IPR029056 Ribokinase-like UP17_08530 6f80786ca1727ec3f40ce4dfe51096ac 324 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 UP17_08530 6f80786ca1727ec3f40ce4dfe51096ac 324 SUPERFAMILY SSF53613 1 318 2.03E-81 T 11-10-2018 IPR029056 Ribokinase-like UP17_23815 d5278dfc68567152553165ebad06faf4 340 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 94 242 7.5E-41 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_23815 d5278dfc68567152553165ebad06faf4 340 Gene3D G3DSA:1.10.260.150 57 340 7.6E-87 T 11-10-2018 UP17_23815 d5278dfc68567152553165ebad06faf4 340 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 94 242 2.1E-45 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_05265 3b8238a033108e2df55392e6c43028ff 104 Pfam PF01906 Putative heavy-metal-binding 1 103 5.6E-40 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 UP17_05265 3b8238a033108e2df55392e6c43028ff 104 SUPERFAMILY SSF117782 1 104 1.57E-38 T 11-10-2018 IPR035439 UPF0145 domain superfamily UP17_05265 3b8238a033108e2df55392e6c43028ff 104 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.167 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 UP17_05265 3b8238a033108e2df55392e6c43028ff 104 Gene3D G3DSA:3.30.110.70 1 104 6.4E-33 T 11-10-2018 UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 382 1.4E-45 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 393 2.0E-191 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 SUPERFAMILY SSF53686 7 392 1.7E-145 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 PIRSF PIRSF001413 2 401 2.7E-167 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 Gene3D G3DSA:3.40.50.1100 58 388 6.0E-190 T 11-10-2018 UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 Gene3D G3DSA:3.40.50.1100 14 210 6.0E-190 T 11-10-2018 UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 395 52.727 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_07030 7a3b4b4b1fa55b80cb9fefb081270bf6 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 SUPERFAMILY SSF53623 33 235 5.23E-17 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 Pfam PF08245 Mur ligase middle domain 37 219 1.3E-9 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 4 383 1.8E-172 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 258 275 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 293 308 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 362 378 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 2.0E-95 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 UP17_18935 cf3afab73151e4fe87ccf7047cfa0bec 393 Gene3D G3DSA:3.40.1190.10 29 238 5.5E-17 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.283 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 SMART SM01403 7 101 1.3E-60 T 11-10-2018 IPR027486 Ribosomal protein S10 domain UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 Gene3D G3DSA:3.30.70.600 1 62 4.2E-21 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 Gene3D G3DSA:3.30.70.600 65 102 1.3E-14 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.3E-47 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 9.5E-37 T 11-10-2018 IPR027486 Ribosomal protein S10 domain UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 5.9E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 5.9E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 5.9E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_00685 5a63d7f29dd0ed848f2ba99209762822 102 SUPERFAMILY SSF54999 5 102 9.55E-39 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily UP17_12495 68aabe2a1b39358913c8ad4b7e84cbce 400 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 233 376 5.9E-21 T 11-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 UP17_12495 68aabe2a1b39358913c8ad4b7e84cbce 400 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 11 396 1.5E-110 T 11-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 UP17_12495 68aabe2a1b39358913c8ad4b7e84cbce 400 SUPERFAMILY SSF53756 1 391 3.14E-77 T 11-10-2018 UP17_12495 68aabe2a1b39358913c8ad4b7e84cbce 400 Gene3D G3DSA:3.40.50.2000 5 391 7.4E-118 T 11-10-2018 UP17_12495 68aabe2a1b39358913c8ad4b7e84cbce 400 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 78 1.7E-7 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_12495 68aabe2a1b39358913c8ad4b7e84cbce 400 Gene3D G3DSA:3.40.50.2000 217 380 7.4E-118 T 11-10-2018 UP17_13580 49af68aadc9f6c6761c5a8ef0f881bcb 64 Pfam PF14169 Cold-inducible protein YdjO 2 58 9.5E-27 T 11-10-2018 IPR025916 Cold-inducible protein YdjO UP17_19800 3f98d5be7118cdcfeb6bf58e78585034 156 Pfam PF12867 DinB superfamily 8 142 1.6E-14 T 11-10-2018 IPR024775 DinB-like domain UP17_19800 3f98d5be7118cdcfeb6bf58e78585034 156 SUPERFAMILY SSF109854 4 149 2.01E-17 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_19800 3f98d5be7118cdcfeb6bf58e78585034 156 Gene3D G3DSA:1.20.120.450 2 149 5.1E-11 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_24475 667e78652ed19f897182a6139466b0c0 211 Gene3D G3DSA:3.90.550.10 2 198 3.3E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_24475 667e78652ed19f897182a6139466b0c0 211 SUPERFAMILY SSF53448 6 191 5.87E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_24475 667e78652ed19f897182a6139466b0c0 211 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 194 22.68 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 UP17_24475 667e78652ed19f897182a6139466b0c0 211 Pfam PF12804 MobA-like NTP transferase domain 6 148 3.0E-30 T 11-10-2018 IPR025877 MobA-like NTP transferase UP17_00385 96bdef1579ce73c4b08fc4e026a91049 331 Pfam PF00069 Protein kinase domain 27 236 2.4E-15 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 UP17_00385 96bdef1579ce73c4b08fc4e026a91049 331 Gene3D G3DSA:3.30.200.20 18 107 2.8E-21 T 11-10-2018 UP17_00385 96bdef1579ce73c4b08fc4e026a91049 331 Gene3D G3DSA:1.10.510.10 108 261 2.8E-21 T 11-10-2018 UP17_00385 96bdef1579ce73c4b08fc4e026a91049 331 SUPERFAMILY SSF56112 17 233 2.8E-25 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_00385 96bdef1579ce73c4b08fc4e026a91049 331 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 33 54 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 UP17_00385 96bdef1579ce73c4b08fc4e026a91049 331 SMART SM00220 27 262 2.8E-7 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 UP17_15120 4154ada46a89465ec46c0df0e619d32a 254 Pfam PF00561 alpha/beta hydrolase fold 18 115 1.9E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_15120 4154ada46a89465ec46c0df0e619d32a 254 SUPERFAMILY SSF53474 5 252 7.91E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_15120 4154ada46a89465ec46c0df0e619d32a 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 2.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_15120 4154ada46a89465ec46c0df0e619d32a 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 2.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_15120 4154ada46a89465ec46c0df0e619d32a 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 2.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_15120 4154ada46a89465ec46c0df0e619d32a 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 2.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_15120 4154ada46a89465ec46c0df0e619d32a 254 Gene3D G3DSA:3.40.50.1820 2 254 1.2E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_13145 d2e55a7a6038d04817fd0ef718e549d7 446 Gene3D G3DSA:3.40.640.10 66 336 8.6E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_13145 d2e55a7a6038d04817fd0ef718e549d7 446 Pfam PF00202 Aminotransferase class-III 32 443 6.2E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_13145 d2e55a7a6038d04817fd0ef718e549d7 446 PIRSF PIRSF000521 21 446 6.9E-36 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_13145 d2e55a7a6038d04817fd0ef718e549d7 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_13145 d2e55a7a6038d04817fd0ef718e549d7 446 Gene3D G3DSA:3.90.1150.10 14 443 8.6E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_13145 d2e55a7a6038d04817fd0ef718e549d7 446 SUPERFAMILY SSF53383 14 445 1.83E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 Pfam PF00027 Cyclic nucleotide-binding domain 21 107 3.4E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 Pfam PF13545 Crp-like helix-turn-helix domain 142 214 3.6E-19 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 SUPERFAMILY SSF46785 139 224 7.5E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 SUPERFAMILY SSF51206 7 135 2.88E-26 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 9.5E-7 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 9.5E-7 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 SMART SM00100 1 121 2.1E-14 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 Gene3D G3DSA:2.60.120.10 6 136 3.3E-27 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 Gene3D G3DSA:1.10.10.10 137 225 6.1E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_05855 3d3a55350823658f3b0041cbaeb070e8 229 SMART SM00419 160 208 2.4E-13 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 UP17_11590 a236b466dabe9d09493c2c84358d07a5 250 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 3 239 5.0E-58 T 11-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 UP17_11590 a236b466dabe9d09493c2c84358d07a5 250 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 14 249 7.0E-43 T 11-10-2018 UP17_11590 a236b466dabe9d09493c2c84358d07a5 250 Gene3D G3DSA:3.30.70.2720 127 249 3.8E-42 T 11-10-2018 UP17_03415 5f807443dd027e6ddd31d0cf8fca1271 493 Pfam PF00474 Sodium:solute symporter family 35 429 1.6E-25 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_03415 5f807443dd027e6ddd31d0cf8fca1271 493 Gene3D G3DSA:1.20.1730.10 22 492 1.0E-32 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_08920 0781e84eeb30fc143e5f3ddf3a7d7528 337 Gene3D G3DSA:3.40.50.10490 166 325 1.0E-50 T 11-10-2018 UP17_08920 0781e84eeb30fc143e5f3ddf3a7d7528 337 Gene3D G3DSA:3.40.50.10490 2 165 2.4E-41 T 11-10-2018 UP17_08920 0781e84eeb30fc143e5f3ddf3a7d7528 337 PIRSF PIRSF009290 1 337 2.4E-119 T 11-10-2018 IPR024713 Fructosamine deglycase FrlB UP17_08920 0781e84eeb30fc143e5f3ddf3a7d7528 337 Pfam PF01380 SIS domain 38 141 1.3E-13 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_08920 0781e84eeb30fc143e5f3ddf3a7d7528 337 SUPERFAMILY SSF53697 20 336 9.72E-56 T 11-10-2018 UP17_22625 c8815b736a3f13c3826e35c1a9d33db4 296 SUPERFAMILY SSF46689 3 65 1.07E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_22625 c8815b736a3f13c3826e35c1a9d33db4 296 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site UP17_22625 c8815b736a3f13c3826e35c1a9d33db4 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_22625 c8815b736a3f13c3826e35c1a9d33db4 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_22625 c8815b736a3f13c3826e35c1a9d33db4 296 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 5.9E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_22625 c8815b736a3f13c3826e35c1a9d33db4 296 Gene3D G3DSA:1.10.357.10 1 194 5.5E-25 T 11-10-2018 UP17_14180 a9c0dd0f15e9a442083f9358938c6ba6 400 PIRSF PIRSF031134 3 393 2.1E-140 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 UP17_14180 a9c0dd0f15e9a442083f9358938c6ba6 400 SUPERFAMILY SSF56112 6 381 1.95E-84 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily UP17_14180 a9c0dd0f15e9a442083f9358938c6ba6 400 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 35 382 1.4E-133 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 UP17_14180 a9c0dd0f15e9a442083f9358938c6ba6 400 Gene3D G3DSA:3.30.200.20 1 118 3.9E-45 T 11-10-2018 UP17_14180 a9c0dd0f15e9a442083f9358938c6ba6 400 Pfam PF01636 Phosphotransferase enzyme family 34 265 5.2E-10 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase UP17_14180 a9c0dd0f15e9a442083f9358938c6ba6 400 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 400 159.948 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 UP17_14180 a9c0dd0f15e9a442083f9358938c6ba6 400 Gene3D G3DSA:3.90.1200.10 119 393 6.9E-98 T 11-10-2018 UP17_12000 93c6ba22f5625d5e026d2b507e3f523b 273 Gene3D G3DSA:3.40.50.150 51 215 4.8E-14 T 11-10-2018 UP17_12000 93c6ba22f5625d5e026d2b507e3f523b 273 Pfam PF13649 Methyltransferase domain 67 142 1.7E-7 T 11-10-2018 UP17_12000 93c6ba22f5625d5e026d2b507e3f523b 273 SUPERFAMILY SSF53335 61 213 8.52E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_06900 976a35354e0ca8727887683cd3e75147 145 Gene3D G3DSA:3.10.580.10 1 145 3.2E-53 T 11-10-2018 UP17_06900 976a35354e0ca8727887683cd3e75147 145 Pfam PF00571 CBS domain 86 138 3.4E-4 T 11-10-2018 IPR000644 CBS domain UP17_06900 976a35354e0ca8727887683cd3e75147 145 SUPERFAMILY SSF54631 13 139 2.95E-26 T 11-10-2018 UP17_11255 3c6db515a2f5ef8cc881bcb98051fce1 503 SUPERFAMILY SSF56425 284 430 2.54E-24 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_11255 3c6db515a2f5ef8cc881bcb98051fce1 503 Gene3D G3DSA:3.90.700.10 265 427 2.9E-120 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_11255 3c6db515a2f5ef8cc881bcb98051fce1 503 Pfam PF00890 FAD binding domain 8 473 6.4E-51 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 UP17_11255 3c6db515a2f5ef8cc881bcb98051fce1 503 SUPERFAMILY SSF51905 4 495 1.59E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_11255 3c6db515a2f5ef8cc881bcb98051fce1 503 Gene3D G3DSA:3.50.50.60 7 489 2.9E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_07245 965eb42c00d8ff72080ae182c14c7ba8 206 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 76 7.7E-44 T 11-10-2018 IPR014243 Transcription factor, RsfA UP17_07245 965eb42c00d8ff72080ae182c14c7ba8 206 Pfam PF13921 Myb-like DNA-binding domain 9 62 5.9E-6 T 11-10-2018 UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.7E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 SUPERFAMILY SSF48498 77 185 3.95E-8 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 56 187 1.1E-50 T 11-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 Gene3D G3DSA:1.10.357.10 1 188 7.5E-64 T 11-10-2018 UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 SUPERFAMILY SSF46689 3 79 2.49E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_21040 c484ee1db1a3d7ec0b0f2b6c82b31b4c 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 2.6E-19 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 SUPERFAMILY SSF50129 1 177 9.11E-59 T 11-10-2018 IPR011032 GroES-like superfamily UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 140 6.2E-29 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 Gene3D G3DSA:3.40.50.720 169 338 8.9E-124 T 11-10-2018 UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 2.6E-10 T 11-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 Gene3D G3DSA:3.90.180.10 4 365 8.9E-124 T 11-10-2018 UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 Pfam PF00107 Zinc-binding dehydrogenase 189 256 4.5E-9 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 SUPERFAMILY SSF51735 156 340 6.94E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13880 940cbfc3efd1afd194dc157aa153d445 378 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 UP17_18835 7dfc9bf3b9b5f6d11cc9a33138e97193 401 SUPERFAMILY SSF103473 6 394 2.35E-62 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_18835 7dfc9bf3b9b5f6d11cc9a33138e97193 401 Gene3D G3DSA:1.20.1250.20 1 385 2.0E-50 T 11-10-2018 UP17_18835 7dfc9bf3b9b5f6d11cc9a33138e97193 401 Pfam PF07690 Major Facilitator Superfamily 15 325 1.3E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_09575 e1c1eaa429fec953e48cabbf42d0e092 75 Gene3D G3DSA:3.30.110.40 1 75 3.8E-29 T 11-10-2018 IPR036868 TusA-like domain superfamily UP17_09575 e1c1eaa429fec953e48cabbf42d0e092 75 Pfam PF01206 Sulfurtransferase TusA 5 74 4.2E-23 T 11-10-2018 IPR001455 TusA-like domain UP17_09575 e1c1eaa429fec953e48cabbf42d0e092 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 11-10-2018 IPR001455 TusA-like domain UP17_09575 e1c1eaa429fec953e48cabbf42d0e092 75 SUPERFAMILY SSF64307 4 75 3.01E-25 T 11-10-2018 IPR036868 TusA-like domain superfamily UP17_15785 2fd5df1bdab64fdfd8d186d9cfafb14f 152 Gene3D G3DSA:1.10.10.10 1 88 3.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15785 2fd5df1bdab64fdfd8d186d9cfafb14f 152 SUPERFAMILY SSF46785 7 141 5.99E-39 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_15785 2fd5df1bdab64fdfd8d186d9cfafb14f 152 Pfam PF01475 Ferric uptake regulator family 15 136 3.7E-40 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 UP17_15785 2fd5df1bdab64fdfd8d186d9cfafb14f 152 Gene3D G3DSA:3.30.1490.190 93 151 7.6E-16 T 11-10-2018 UP17_14125 d62b26a78c30554a82c6484a5d1e8f93 320 SUPERFAMILY SSF51004 31 315 5.23E-22 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily UP17_14125 d62b26a78c30554a82c6484a5d1e8f93 320 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 285 316 4.6E-8 T 11-10-2018 IPR011964 YVTN beta-propeller repeat UP17_14125 d62b26a78c30554a82c6484a5d1e8f93 320 Gene3D G3DSA:2.130.10.10 131 319 4.9E-13 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 UP17_05655 cb26f5b87b390541866b299ccc50eabc 175 SMART SM00471 19 148 4.4E-7 T 11-10-2018 IPR003607 HD/PDEase domain UP17_05655 cb26f5b87b390541866b299ccc50eabc 175 SUPERFAMILY SSF109604 14 137 5.83E-21 T 11-10-2018 UP17_05655 cb26f5b87b390541866b299ccc50eabc 175 Gene3D G3DSA:1.10.3210.10 7 156 8.3E-16 T 11-10-2018 UP17_05655 cb26f5b87b390541866b299ccc50eabc 175 TIGRFAM TIGR00277 HDIG: HDIG domain 22 90 1.6E-7 T 11-10-2018 IPR006675 HDIG domain UP17_05655 cb26f5b87b390541866b299ccc50eabc 175 Pfam PF01966 HD domain 24 135 1.4E-13 T 11-10-2018 IPR006674 HD domain UP17_24270 b939796549ae60222d7b718657f857e2 320 Gene3D G3DSA:3.40.190.90 122 283 1.2E-132 T 11-10-2018 UP17_24270 b939796549ae60222d7b718657f857e2 320 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 318 6.9E-152 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 UP17_24270 b939796549ae60222d7b718657f857e2 320 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 309 1.5E-141 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 UP17_24270 b939796549ae60222d7b718657f857e2 320 SUPERFAMILY SSF56655 1 311 7.32E-110 T 11-10-2018 UP17_24270 b939796549ae60222d7b718657f857e2 320 Gene3D G3DSA:3.30.540.10 7 309 1.2E-132 T 11-10-2018 UP17_24270 b939796549ae60222d7b718657f857e2 320 PIRSF PIRSF004532 1 319 1.9E-149 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 UP17_11735 b1452dfba71ea54cf5c58fc8c35c3681 599 Gene3D G3DSA:2.120.10.30 12 202 8.2E-17 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like UP17_11735 b1452dfba71ea54cf5c58fc8c35c3681 599 Pfam PF07676 WD40-like Beta Propeller Repeat 102 128 0.14 T 11-10-2018 IPR011659 WD40-like Beta Propeller UP17_11735 b1452dfba71ea54cf5c58fc8c35c3681 599 Pfam PF07676 WD40-like Beta Propeller Repeat 18 43 0.082 T 11-10-2018 IPR011659 WD40-like Beta Propeller UP17_11735 b1452dfba71ea54cf5c58fc8c35c3681 599 Gene3D G3DSA:3.40.50.1820 332 598 2.7E-63 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_11735 b1452dfba71ea54cf5c58fc8c35c3681 599 Pfam PF00326 Prolyl oligopeptidase family 387 593 1.1E-40 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 UP17_11735 b1452dfba71ea54cf5c58fc8c35c3681 599 SUPERFAMILY SSF69322 18 305 2.75E-19 T 11-10-2018 UP17_11735 b1452dfba71ea54cf5c58fc8c35c3681 599 SUPERFAMILY SSF53474 342 591 1.18E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_16175 c71025b52a84230dd00972b9082fca76 317 Pfam PF07136 Protein of unknown function (DUF1385) 56 301 3.0E-79 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 UP17_16175 c71025b52a84230dd00972b9082fca76 317 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 56 296 4.0E-82 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 UP17_14045 cc1add32b68e7bbf5b11b14e69f7ebf1 190 SMART SM00947 26 182 7.7E-35 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UP17_14045 cc1add32b68e7bbf5b11b14e69f7ebf1 190 Gene3D G3DSA:3.40.1050.10 2 183 1.6E-44 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 UP17_14045 cc1add32b68e7bbf5b11b14e69f7ebf1 190 Pfam PF00484 Carbonic anhydrase 33 177 2.7E-14 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 UP17_14045 cc1add32b68e7bbf5b11b14e69f7ebf1 190 SUPERFAMILY SSF53056 4 181 4.06E-38 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 UP17_12465 6e954f12344e12b0e74dfe4e48d721da 217 Pfam PF07729 FCD domain 83 204 2.7E-11 T 11-10-2018 IPR011711 GntR, C-terminal UP17_12465 6e954f12344e12b0e74dfe4e48d721da 217 SMART SM00345 15 73 6.2E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12465 6e954f12344e12b0e74dfe4e48d721da 217 SUPERFAMILY SSF46785 12 77 1.76E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_12465 6e954f12344e12b0e74dfe4e48d721da 217 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 73 4.4E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_12465 6e954f12344e12b0e74dfe4e48d721da 217 SUPERFAMILY SSF48008 79 211 1.15E-13 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_12465 6e954f12344e12b0e74dfe4e48d721da 217 Gene3D G3DSA:1.20.120.530 72 212 2.2E-16 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_12465 6e954f12344e12b0e74dfe4e48d721da 217 Gene3D G3DSA:1.10.10.10 3 71 8.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01170 55ab04d651dc5f11a5bb290876e6c588 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 23 229 8.0E-22 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 UP17_01170 55ab04d651dc5f11a5bb290876e6c588 244 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 43.223 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 UP17_01170 55ab04d651dc5f11a5bb290876e6c588 244 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 UP17_01170 55ab04d651dc5f11a5bb290876e6c588 244 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 238 1.4E-97 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 UP17_01170 55ab04d651dc5f11a5bb290876e6c588 244 Gene3D G3DSA:3.40.50.1360 1 240 3.6E-101 T 11-10-2018 UP17_01170 55ab04d651dc5f11a5bb290876e6c588 244 SUPERFAMILY SSF100950 1 239 8.9E-93 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_05595 bec46bf5fa95fc75fb0d15126835af4c 247 SMART SM00382 28 213 4.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_05595 bec46bf5fa95fc75fb0d15126835af4c 247 Gene3D G3DSA:3.40.50.300 1 245 2.5E-63 T 11-10-2018 UP17_05595 bec46bf5fa95fc75fb0d15126835af4c 247 SUPERFAMILY SSF52540 3 229 3.55E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_05595 bec46bf5fa95fc75fb0d15126835af4c 247 Pfam PF00005 ABC transporter 19 162 4.3E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_11425 b08159e7d4a7d6261062de8ebfa3efe0 145 SUPERFAMILY SSF55729 14 135 4.99E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_11425 b08159e7d4a7d6261062de8ebfa3efe0 145 Gene3D G3DSA:3.40.630.30 2 145 5.9E-21 T 11-10-2018 UP17_11425 b08159e7d4a7d6261062de8ebfa3efe0 145 Pfam PF00583 Acetyltransferase (GNAT) family 38 133 1.4E-11 T 11-10-2018 IPR000182 GNAT domain UP17_23315 079a04568f9538808c703d496b6c4254 162 SUPERFAMILY SSF48452 4 153 2.73E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_23315 079a04568f9538808c703d496b6c4254 162 Gene3D G3DSA:1.25.40.10 45 153 5.8E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 UP17_23315 079a04568f9538808c703d496b6c4254 162 Pfam PF12688 Tetratrico peptide repeat 36 147 6.1E-13 T 11-10-2018 UP17_07920 1d320741841c57bc1147bd1653029a55 212 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 17 209 4.0E-10 T 11-10-2018 UP17_10720 6fad95274c8019c45d02416e7c20d89d 491 Gene3D G3DSA:3.30.1360.60 413 491 2.4E-22 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_10720 6fad95274c8019c45d02416e7c20d89d 491 SUPERFAMILY SSF55604 415 488 2.09E-18 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 UP17_10720 6fad95274c8019c45d02416e7c20d89d 491 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 486 2.3E-197 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 UP17_10720 6fad95274c8019c45d02416e7c20d89d 491 Pfam PF00367 phosphotransferase system, EIIB 418 450 1.9E-10 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 UP17_10720 6fad95274c8019c45d02416e7c20d89d 491 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 374 475 8.8E-16 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 UP17_10720 6fad95274c8019c45d02416e7c20d89d 491 Pfam PF02378 Phosphotransferase system, EIIC 10 315 6.2E-79 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_22630 f09a2c480f3a4f60f34ef1acdd1bac73 115 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 104 1.9E-29 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 Gene3D G3DSA:3.40.640.10 139 359 2.0E-51 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 Gene3D G3DSA:3.90.1150.10 126 460 2.0E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 Gene3D G3DSA:1.10.10.10 13 88 1.1E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 Pfam PF00155 Aminotransferase class I and II 119 441 7.9E-17 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 1.5E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 SUPERFAMILY SSF53383 104 463 3.13E-58 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 SMART SM00345 28 87 2.0E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_19975 3160cb66cc9ecc50c273acc5a39ae5ec 464 SUPERFAMILY SSF46785 21 91 5.45E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_25040 52fc0f4e26e00d2e7c3f7d59f083e6f1 262 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 244 2.0E-66 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_25040 52fc0f4e26e00d2e7c3f7d59f083e6f1 262 PRINTS PR01900 YidC translocation/secretion protein signature 175 190 3.4E-5 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 UP17_25040 52fc0f4e26e00d2e7c3f7d59f083e6f1 262 PRINTS PR01900 YidC translocation/secretion protein signature 200 224 3.4E-5 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 UP17_25040 52fc0f4e26e00d2e7c3f7d59f083e6f1 262 Pfam PF02096 60Kd inner membrane protein 59 244 6.4E-61 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 UP17_25040 52fc0f4e26e00d2e7c3f7d59f083e6f1 262 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 249 32.363 T 11-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 UP17_16710 26e5dc39044f22442edf55d5e72ffb72 94 Pfam PF07873 YabP family 28 91 1.1E-17 T 11-10-2018 IPR022476 Sporulation protein YabP/YqfC UP17_16710 26e5dc39044f22442edf55d5e72ffb72 94 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 9 92 1.2E-35 T 11-10-2018 IPR022477 Sporulation protein YqfC UP17_03705 594de49da01af113d8b811eae467b896 218 Gene3D G3DSA:1.10.3720.10 1 217 5.6E-61 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03705 594de49da01af113d8b811eae467b896 218 SUPERFAMILY SSF161098 13 201 1.7E-48 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03705 594de49da01af113d8b811eae467b896 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 4.5E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_03705 594de49da01af113d8b811eae467b896 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 8.4E-27 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 UP17_16255 69e35b8dcc6c1909db64cc679c44d79c 112 ProDom PD073895 COMPETENCE COMGE LATE MACHINERY MEMBRANE OPERON DNA THE METHYLATION PART 1 85 2.0E-6 T 11-10-2018 IPR020488 Competence operon G, ComGE UP17_09480 41836853ee34281a0b41a112648e3da7 284 SUPERFAMILY SSF53697 98 277 3.78E-23 T 11-10-2018 UP17_09480 41836853ee34281a0b41a112648e3da7 284 Pfam PF01380 SIS domain 131 254 4.4E-18 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_09480 41836853ee34281a0b41a112648e3da7 284 Gene3D G3DSA:1.10.10.10 5 78 2.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09480 41836853ee34281a0b41a112648e3da7 284 SUPERFAMILY SSF46689 6 80 4.48E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_09480 41836853ee34281a0b41a112648e3da7 284 Gene3D G3DSA:3.40.50.10490 97 280 9.6E-32 T 11-10-2018 UP17_09480 41836853ee34281a0b41a112648e3da7 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 77 1.8E-11 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 UP17_25205 0c07d61f390566cb7a019efe0d4789ce 149 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 26 125 2.0E-11 T 11-10-2018 UP17_25205 0c07d61f390566cb7a019efe0d4789ce 149 Pfam PF14184 Regulatory protein YrvL 25 144 2.1E-25 T 11-10-2018 IPR025912 Regulatory protein YrvL UP17_21440 f17d8ca12f9b234cf3a650bdafe1b915 344 Pfam PF13303 Phosphotransferase system, EIIC 28 332 2.9E-62 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_17825 267b6f87c664c1d991664d9de88b61bb 360 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 8 355 5.5E-53 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_17825 267b6f87c664c1d991664d9de88b61bb 360 Pfam PF03845 Spore germination protein 12 316 1.7E-33 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 Gene3D G3DSA:3.30.870.10 134 314 3.6E-47 T 11-10-2018 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 SMART SM00155 415 442 1.9E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 SMART SM00155 237 264 7.0E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 SUPERFAMILY SSF56024 289 488 2.92E-47 T 11-10-2018 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 Pfam PF13396 Phospholipase_D-nuclease N-terminal 40 81 3.1E-7 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 Gene3D G3DSA:3.30.870.10 319 498 2.9E-31 T 11-10-2018 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 35 502 9.7E-179 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 Pfam PF13091 PLD-like domain 344 469 1.8E-27 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 Pfam PF13091 PLD-like domain 154 297 1.8E-11 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 Hamap MF_01916 Cardiolipin synthase. 33 502 42.857 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 UP17_06010 fbc90cbd65b7aee92d3c0fb8be702855 502 SUPERFAMILY SSF56024 125 332 1.23E-50 T 11-10-2018 UP17_03775 4ce2101d356298e49caa2cff656e8686 51 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 16 47 2.2E-22 T 11-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 UP17_03775 4ce2101d356298e49caa2cff656e8686 51 Pfam PF08176 Small acid-soluble spore protein K family 1 47 4.6E-29 T 11-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 UP17_03775 4ce2101d356298e49caa2cff656e8686 51 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 1 49 18.791 T 11-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 UP17_03920 60343fba1977a7b0debf1dab08616fef 147 SUPERFAMILY SSF46785 10 139 1.32E-40 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_03920 60343fba1977a7b0debf1dab08616fef 147 Gene3D G3DSA:3.30.1490.190 90 147 1.2E-21 T 11-10-2018 UP17_03920 60343fba1977a7b0debf1dab08616fef 147 Gene3D G3DSA:1.10.10.10 3 89 7.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03920 60343fba1977a7b0debf1dab08616fef 147 Pfam PF01475 Ferric uptake regulator family 18 135 6.8E-39 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 UP17_15545 9cfcf40863e7a3db2e1c383b03d21701 191 PIRSF PIRSF029008 85 191 3.0E-23 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA UP17_15545 9cfcf40863e7a3db2e1c383b03d21701 191 PIRSF PIRSF029008 1 100 1.2E-25 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA UP17_15545 9cfcf40863e7a3db2e1c383b03d21701 191 Pfam PF05389 Negative regulator of genetic competence (MecA) 100 186 2.7E-17 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA UP17_15545 9cfcf40863e7a3db2e1c383b03d21701 191 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 90 3.1E-21 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA UP17_15545 9cfcf40863e7a3db2e1c383b03d21701 191 Gene3D G3DSA:3.30.70.1950 102 191 1.5E-27 T 11-10-2018 IPR038471 MecA, C-terminal domain superfamily UP17_02430 cae2356ae2bf68c3c15f2c489e577c8e 278 SUPERFAMILY SSF103481 199 276 9.94E-8 T 11-10-2018 UP17_02430 cae2356ae2bf68c3c15f2c489e577c8e 278 Pfam PF00892 EamA-like transporter family 2 132 1.1E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_02430 cae2356ae2bf68c3c15f2c489e577c8e 278 Pfam PF00892 EamA-like transporter family 148 276 6.3E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_02430 cae2356ae2bf68c3c15f2c489e577c8e 278 SUPERFAMILY SSF103481 45 136 1.83E-7 T 11-10-2018 UP17_13885 900a1baf7cbb9deb01fe19399bd85025 120 Pfam PF07875 Coat F domain 19 79 9.2E-18 T 11-10-2018 IPR012851 Spore coat protein CotF-like UP17_20650 13baad183a8b418049ddc03a8db0b24c 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 9.4E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_20650 13baad183a8b418049ddc03a8db0b24c 328 SUPERFAMILY SSF52540 12 261 1.54E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_20650 13baad183a8b418049ddc03a8db0b24c 328 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_20650 13baad183a8b418049ddc03a8db0b24c 328 SMART SM00382 47 239 2.8E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_20650 13baad183a8b418049ddc03a8db0b24c 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 239 325 3.3E-30 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_20650 13baad183a8b418049ddc03a8db0b24c 328 Pfam PF00005 ABC transporter 39 189 4.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_20650 13baad183a8b418049ddc03a8db0b24c 328 Gene3D G3DSA:3.40.50.300 9 328 1.8E-101 T 11-10-2018 UP17_01350 55c813a65e385d7160b3671da3709fdf 157 Pfam PF03703 Bacterial PH domain 70 146 1.8E-16 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_16800 72f2a755e6f4bc53feeb49cefb7101ca 399 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 103 380 1.1E-72 T 11-10-2018 IPR010897 Sporulation stage II, protein P UP17_16800 72f2a755e6f4bc53feeb49cefb7101ca 399 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 181 384 9.2E-71 T 11-10-2018 IPR010897 Sporulation stage II, protein P UP17_16800 72f2a755e6f4bc53feeb49cefb7101ca 399 SUPERFAMILY SSF53187 260 383 1.22E-6 T 11-10-2018 UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 PRINTS PR00154 AMP-binding signature 180 188 7.3E-5 T 11-10-2018 IPR020459 AMP-binding UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 PRINTS PR00154 AMP-binding signature 168 179 7.3E-5 T 11-10-2018 IPR020459 AMP-binding UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 11-10-2018 IPR020845 AMP-binding, conserved site UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 501 2.6E-22 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 Pfam PF00501 AMP-binding enzyme 9 418 1.1E-115 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 Gene3D G3DSA:3.40.50.12780 1 411 2.1E-126 T 11-10-2018 UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 Gene3D G3DSA:3.30.300.310 414 513 2.2E-34 T 11-10-2018 UP17_05650 07fbebdf610f4e8ca959c3792e67743d 514 SUPERFAMILY SSF56801 4 511 3.14E-163 T 11-10-2018 UP17_19385 d49d59103ac5dfcf4fe065c3304f6796 211 Pfam PF04012 PspA/IM30 family 3 208 1.5E-20 T 11-10-2018 IPR007157 PspA/IM30 UP17_19385 d49d59103ac5dfcf4fe065c3304f6796 211 SUPERFAMILY SSF158832 33 141 6.02E-5 T 11-10-2018 UP17_17295 063d48a0ad8318997987bf9a58961f22 235 Gene3D G3DSA:3.40.50.300 1 235 4.1E-68 T 11-10-2018 UP17_17295 063d48a0ad8318997987bf9a58961f22 235 SUPERFAMILY SSF52540 2 232 2.77E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17295 063d48a0ad8318997987bf9a58961f22 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_17295 063d48a0ad8318997987bf9a58961f22 235 Pfam PF00005 ABC transporter 17 162 4.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_17295 063d48a0ad8318997987bf9a58961f22 235 SMART SM00382 26 211 4.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_17295 063d48a0ad8318997987bf9a58961f22 235 PIRSF PIRSF039137 1 235 1.7E-115 T 11-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 UP17_07135 4c17eac9b2a078d40412680888eee2cb 111 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 4 110 1.7E-47 T 11-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 UP17_07135 4c17eac9b2a078d40412680888eee2cb 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 30 102 8.6E-14 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 UP17_07765 3cd8125b208a2837486a9f5d1dc8fc97 94 Pfam PF02049 Flagellar hook-basal body complex protein FliE 11 94 1.8E-30 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UP17_07765 3cd8125b208a2837486a9f5d1dc8fc97 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 58 74 1.3E-17 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UP17_07765 3cd8125b208a2837486a9f5d1dc8fc97 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 24 40 1.3E-17 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UP17_07765 3cd8125b208a2837486a9f5d1dc8fc97 94 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 79 92 1.3E-17 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UP17_07765 3cd8125b208a2837486a9f5d1dc8fc97 94 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 94 17.473 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UP17_07765 3cd8125b208a2837486a9f5d1dc8fc97 94 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 13 94 9.0E-27 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 10 218 1.8E-29 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 16 499 6.0E-229 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 Gene3D G3DSA:3.40.1080.20 339 479 2.5E-41 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 Gene3D G3DSA:3.30.750.70 234 327 1.4E-6 T 11-10-2018 UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 SUPERFAMILY SSF100950 7 225 1.31E-66 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 Gene3D G3DSA:3.40.1080.10 5 175 2.4E-14 T 11-10-2018 UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 SUPERFAMILY SSF100950 228 499 3.3E-84 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_02505 51c9df98ec8748163cf1d609a3b1d29c 508 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 466 6.6E-43 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain UP17_25270 0bf0e967f72bd31b04d5b600e0669111 135 Pfam PF01909 Nucleotidyltransferase domain 19 92 1.3E-9 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 UP17_25270 0bf0e967f72bd31b04d5b600e0669111 135 Gene3D G3DSA:3.30.460.10 1 107 1.9E-20 T 11-10-2018 UP17_25270 0bf0e967f72bd31b04d5b600e0669111 135 SUPERFAMILY SSF81301 4 100 1.28E-18 T 11-10-2018 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 Gene3D G3DSA:1.20.1720.10 17 248 8.0E-37 T 11-10-2018 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 SUPERFAMILY SSF103473 12 476 7.85E-65 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 437 3.0E-123 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 Pfam PF07690 Major Facilitator Superfamily 22 412 4.7E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 1.0E-7 T 11-10-2018 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.0E-7 T 11-10-2018 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 1.0E-7 T 11-10-2018 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.0E-7 T 11-10-2018 UP17_14635 6b40498891d7649040c1fa4f1f169f4d 498 Gene3D G3DSA:1.20.1250.20 263 479 3.3E-23 T 11-10-2018 UP17_00980 5051922ed177f9f8a0b0377fa57bb6df 274 Hamap MF_01499 Diadenylate cyclase [dacA]. 1 254 34.295 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 UP17_00980 5051922ed177f9f8a0b0377fa57bb6df 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 235 6.9E-43 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal UP17_00980 5051922ed177f9f8a0b0377fa57bb6df 274 Gene3D G3DSA:3.40.1700.10 102 255 1.2E-61 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily UP17_00980 5051922ed177f9f8a0b0377fa57bb6df 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 4 254 2.8E-93 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 UP17_00980 5051922ed177f9f8a0b0377fa57bb6df 274 SUPERFAMILY SSF143597 40 240 2.75E-70 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily UP17_00980 5051922ed177f9f8a0b0377fa57bb6df 274 PIRSF PIRSF004793 3 269 5.0E-93 T 11-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 UP17_10645 4539c0b16553c2c5227b0531d80e9e5a 81 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 7 72 1.3E-21 T 11-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like UP17_10645 4539c0b16553c2c5227b0531d80e9e5a 81 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 78 23.807 T 11-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like UP17_19490 6bb4689dbb064c63ba0fe73ca1e27168 159 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 127 7.3E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_19490 6bb4689dbb064c63ba0fe73ca1e27168 159 Gene3D G3DSA:3.10.180.10 1 141 3.6E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_19490 6bb4689dbb064c63ba0fe73ca1e27168 159 SUPERFAMILY SSF54593 1 132 7.84E-22 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_18870 627d3f17b9d8dd33bffdb461af75057b 248 Gene3D G3DSA:3.40.50.1820 1 246 2.1E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_18870 627d3f17b9d8dd33bffdb461af75057b 248 SUPERFAMILY SSF53474 13 244 4.31E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_18870 627d3f17b9d8dd33bffdb461af75057b 248 Pfam PF12146 Serine aminopeptidase, S33 15 225 3.5E-16 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 UP17_18870 627d3f17b9d8dd33bffdb461af75057b 248 PIRSF PIRSF017388 1 246 8.3E-79 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 UP17_16575 465ff8b3e2d34706ea624970add8c6bb 138 Gene3D G3DSA:3.30.1490.190 87 138 3.8E-15 T 11-10-2018 UP17_16575 465ff8b3e2d34706ea624970add8c6bb 138 SUPERFAMILY SSF46785 6 133 4.99E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_16575 465ff8b3e2d34706ea624970add8c6bb 138 Gene3D G3DSA:1.10.10.10 2 83 6.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16575 465ff8b3e2d34706ea624970add8c6bb 138 Pfam PF01475 Ferric uptake regulator family 13 129 1.3E-29 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 UP17_11440 1cbbae8c27ce845193271a81f3908b05 116 Pfam PF01638 HxlR-like helix-turn-helix 16 100 1.5E-32 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type UP17_11440 1cbbae8c27ce845193271a81f3908b05 116 SUPERFAMILY SSF46785 2 99 1.92E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_11440 1cbbae8c27ce845193271a81f3908b05 116 Gene3D G3DSA:1.10.10.10 1 104 8.5E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10570 61819ba8ed31f81d86b416dae46ce917 346 Gene3D G3DSA:3.20.20.70 120 344 5.3E-55 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_10570 61819ba8ed31f81d86b416dae46ce917 346 Gene3D G3DSA:3.20.20.70 2 119 4.7E-35 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_10570 61819ba8ed31f81d86b416dae46ce917 346 SUPERFAMILY SSF51395 4 332 3.05E-87 T 11-10-2018 UP17_10570 61819ba8ed31f81d86b416dae46ce917 346 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 114 3.0E-23 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 UP17_10570 61819ba8ed31f81d86b416dae46ce917 346 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 120 331 1.1E-32 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 UP17_14290 6a5bf0255a599a32172434e8565cc6bd 454 Gene3D G3DSA:3.90.1150.10 17 433 3.3E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_14290 6a5bf0255a599a32172434e8565cc6bd 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_14290 6a5bf0255a599a32172434e8565cc6bd 454 PIRSF PIRSF000521 15 436 3.3E-39 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_14290 6a5bf0255a599a32172434e8565cc6bd 454 Pfam PF00202 Aminotransferase class-III 17 432 4.3E-108 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 UP17_14290 6a5bf0255a599a32172434e8565cc6bd 454 Gene3D G3DSA:3.40.640.10 50 327 3.3E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_14290 6a5bf0255a599a32172434e8565cc6bd 454 SUPERFAMILY SSF53383 10 433 6.12E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_20980 7a21fe22c2e9a1cc5709fcd39fc06123 91 Gene3D G3DSA:1.10.10.60 11 90 5.9E-9 T 11-10-2018 UP17_20980 7a21fe22c2e9a1cc5709fcd39fc06123 91 SUPERFAMILY SSF46689 7 90 5.73E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_20980 7a21fe22c2e9a1cc5709fcd39fc06123 91 Pfam PF01527 Transposase 8 78 1.3E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_08620 7a21fe22c2e9a1cc5709fcd39fc06123 91 Gene3D G3DSA:1.10.10.60 11 90 5.9E-9 T 11-10-2018 UP17_08620 7a21fe22c2e9a1cc5709fcd39fc06123 91 SUPERFAMILY SSF46689 7 90 5.73E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_08620 7a21fe22c2e9a1cc5709fcd39fc06123 91 Pfam PF01527 Transposase 8 78 1.3E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_03105 7a21fe22c2e9a1cc5709fcd39fc06123 91 Gene3D G3DSA:1.10.10.60 11 90 5.9E-9 T 11-10-2018 UP17_03105 7a21fe22c2e9a1cc5709fcd39fc06123 91 SUPERFAMILY SSF46689 7 90 5.73E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_03105 7a21fe22c2e9a1cc5709fcd39fc06123 91 Pfam PF01527 Transposase 8 78 1.3E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_02920 7a21fe22c2e9a1cc5709fcd39fc06123 91 Gene3D G3DSA:1.10.10.60 11 90 5.9E-9 T 11-10-2018 UP17_02920 7a21fe22c2e9a1cc5709fcd39fc06123 91 SUPERFAMILY SSF46689 7 90 5.73E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_02920 7a21fe22c2e9a1cc5709fcd39fc06123 91 Pfam PF01527 Transposase 8 78 1.3E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_10815 4efabe7778e8bf78cb5a719b82d1ef59 91 Gene3D G3DSA:1.10.10.60 11 90 7.0E-9 T 11-10-2018 UP17_10815 4efabe7778e8bf78cb5a719b82d1ef59 91 SUPERFAMILY SSF46689 8 90 9.5E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_10815 4efabe7778e8bf78cb5a719b82d1ef59 91 Pfam PF01527 Transposase 8 78 2.2E-13 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 UP17_06210 0cda7095f16f94aabdd310bd8ccb556a 280 Pfam PF00005 ABC transporter 23 162 2.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_06210 0cda7095f16f94aabdd310bd8ccb556a 280 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_06210 0cda7095f16f94aabdd310bd8ccb556a 280 SMART SM00382 32 213 2.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_06210 0cda7095f16f94aabdd310bd8ccb556a 280 SUPERFAMILY SSF52540 3 213 4.62E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_06210 0cda7095f16f94aabdd310bd8ccb556a 280 Gene3D G3DSA:3.40.50.300 2 271 9.1E-65 T 11-10-2018 UP17_19380 d3ad3d803ba414369408aa1e020a60e0 248 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 131 245 5.4E-36 T 11-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF UP17_19380 d3ad3d803ba414369408aa1e020a60e0 248 PIRSF PIRSF031509 4 248 5.7E-61 T 11-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 UP17_20715 a50aa130478456c406e0a3c3ca7d2c1a 500 SUPERFAMILY SSF46785 85 163 4.79E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20715 a50aa130478456c406e0a3c3ca7d2c1a 500 Gene3D G3DSA:1.10.10.10 2 142 1.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20715 a50aa130478456c406e0a3c3ca7d2c1a 500 Pfam PF05043 Mga helix-turn-helix domain 73 153 3.4E-17 T 11-10-2018 IPR007737 Mga helix-turn-helix domain UP17_20715 a50aa130478456c406e0a3c3ca7d2c1a 500 SUPERFAMILY SSF46785 5 47 3.52E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_20715 a50aa130478456c406e0a3c3ca7d2c1a 500 Pfam PF08280 M protein trans-acting positive regulator (MGA) HTH domain 14 59 2.9E-5 T 11-10-2018 IPR013199 M protein trans-acting positive regulator (MGA) HTH domain UP17_03760 ffebe40c3dd8c32357ee521e6b65cfc6 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 9.1E-13 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 UP17_03760 ffebe40c3dd8c32357ee521e6b65cfc6 306 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 1.7E-101 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 UP17_03760 ffebe40c3dd8c32357ee521e6b65cfc6 306 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 1.5E-17 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 UP17_03760 ffebe40c3dd8c32357ee521e6b65cfc6 306 Gene3D G3DSA:3.40.50.720 2 305 2.8E-69 T 11-10-2018 UP17_03760 ffebe40c3dd8c32357ee521e6b65cfc6 306 SUPERFAMILY SSF51735 1 298 3.04E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_04655 4cc3166b57ec7d1ae5d35a7d220a0c0a 291 SUPERFAMILY SSF55120 71 282 2.56E-66 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_04655 4cc3166b57ec7d1ae5d35a7d220a0c0a 291 Gene3D G3DSA:3.30.2350.10 66 281 6.3E-67 T 11-10-2018 UP17_04655 4cc3166b57ec7d1ae5d35a7d220a0c0a 291 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 126 140 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_04655 4cc3166b57ec7d1ae5d35a7d220a0c0a 291 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 6 280 3.3E-73 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_04655 4cc3166b57ec7d1ae5d35a7d220a0c0a 291 Pfam PF00849 RNA pseudouridylate synthase 84 236 1.6E-35 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 UP17_04330 d5515c67bb266321cc08939bc9c51555 113 Pfam PF00085 Thioredoxin 5 103 3.6E-17 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 UP17_04330 d5515c67bb266321cc08939bc9c51555 113 Gene3D G3DSA:3.40.30.10 1 106 1.3E-21 T 11-10-2018 UP17_04330 d5515c67bb266321cc08939bc9c51555 113 SUPERFAMILY SSF52833 2 104 1.19E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_17675 f4d76ad4adb71bf99116601d7babe412 160 ProDom PD104119 YSXD OB2071 ORFY 1 160 1.0E-20 T 11-10-2018 UP17_16915 f25827649809b4abdba9dc2fa8b06408 378 SUPERFAMILY SSF53383 19 377 8.78E-121 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_16915 f25827649809b4abdba9dc2fa8b06408 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_16915 f25827649809b4abdba9dc2fa8b06408 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 377 3.6E-158 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_16915 f25827649809b4abdba9dc2fa8b06408 378 Gene3D G3DSA:3.40.640.10 3 245 1.1E-92 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_16915 f25827649809b4abdba9dc2fa8b06408 378 PIRSF PIRSF001434 1 378 2.3E-147 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 UP17_16915 f25827649809b4abdba9dc2fa8b06408 378 Gene3D G3DSA:3.90.1150.10 246 378 1.1E-54 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_09895 bba0587dc79a19399282abdd91347425 253 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 45.014 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 UP17_09895 bba0587dc79a19399282abdd91347425 253 Gene3D G3DSA:3.20.20.370 2 253 2.6E-99 T 11-10-2018 UP17_09895 bba0587dc79a19399282abdd91347425 253 Pfam PF03746 LamB/YcsF family 4 242 1.1E-99 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 UP17_09895 bba0587dc79a19399282abdd91347425 253 SUPERFAMILY SSF88713 3 251 7.41E-97 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_03405 53d2d387d6575b51c2453851cad1558e 110 Gene3D G3DSA:1.20.5.190 23 75 2.0E-5 T 11-10-2018 UP17_19325 48d00fabadd39d50076a1337fc20e11c 357 SUPERFAMILY SSF111283 123 353 3.27E-39 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 UP17_19325 48d00fabadd39d50076a1337fc20e11c 357 Pfam PF01523 Putative modulator of DNA gyrase 114 204 1.5E-9 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 UP17_15245 f6b74390bf625ad386ef41c46cb5ccf6 158 SUPERFAMILY SSF54403 95 155 1.31E-19 T 11-10-2018 UP17_15245 f6b74390bf625ad386ef41c46cb5ccf6 158 Gene3D G3DSA:3.10.450.40 23 94 2.6E-18 T 11-10-2018 UP17_15245 f6b74390bf625ad386ef41c46cb5ccf6 158 Gene3D G3DSA:3.10.450.40 95 156 1.1E-25 T 11-10-2018 UP17_15245 f6b74390bf625ad386ef41c46cb5ccf6 158 SUPERFAMILY SSF54403 32 89 1.38E-14 T 11-10-2018 UP17_21590 e864cb35807ea5fcc3a7b428f0d1432c 213 Pfam PF13460 NAD(P)H-binding 7 199 1.6E-24 T 11-10-2018 IPR016040 NAD(P)-binding domain UP17_21590 e864cb35807ea5fcc3a7b428f0d1432c 213 Gene3D G3DSA:3.40.50.720 1 211 3.1E-53 T 11-10-2018 UP17_21590 e864cb35807ea5fcc3a7b428f0d1432c 213 SUPERFAMILY SSF51735 1 209 1.34E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_23465 c158953d356c9a65bcd125c1fa5609b2 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 62.54 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23465 c158953d356c9a65bcd125c1fa5609b2 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23465 c158953d356c9a65bcd125c1fa5609b2 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 3.2E-59 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23465 c158953d356c9a65bcd125c1fa5609b2 253 Gene3D G3DSA:3.20.20.70 2 252 9.9E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_23465 c158953d356c9a65bcd125c1fa5609b2 253 Pfam PF00121 Triosephosphate isomerase 5 246 2.9E-95 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23465 c158953d356c9a65bcd125c1fa5609b2 253 SUPERFAMILY SSF51351 1 248 1.44E-95 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_03695 7d86f777ba7f4e4582738f4715182aaa 339 Pfam PF01594 AI-2E family transporter 16 330 7.1E-36 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like UP17_09350 b39cc615bf090675495ef1879b116a18 139 Pfam PF02082 Transcriptional regulator 2 79 1.9E-20 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_09350 b39cc615bf090675495ef1879b116a18 139 Gene3D G3DSA:1.10.10.10 1 138 3.7E-42 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_09350 b39cc615bf090675495ef1879b116a18 139 SUPERFAMILY SSF46785 2 135 2.38E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_13560 ba93a3c9f91f47103608ed672aefb634 323 Pfam PF01758 Sodium Bile acid symporter family 42 220 8.4E-44 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 UP17_13560 ba93a3c9f91f47103608ed672aefb634 323 Gene3D G3DSA:1.20.1530.20 1 307 2.9E-116 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 PRINTS PR00990 Ribokinase signature 207 218 3.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 PRINTS PR00990 Ribokinase signature 6 27 3.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 PRINTS PR00990 Ribokinase signature 172 187 3.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 PRINTS PR00990 Ribokinase signature 104 117 3.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 PRINTS PR00990 Ribokinase signature 33 52 3.7E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 SUPERFAMILY SSF53613 1 290 6.39E-77 T 11-10-2018 IPR029056 Ribokinase-like UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 Gene3D G3DSA:3.40.1190.20 1 292 1.2E-90 T 11-10-2018 IPR029056 Ribokinase-like UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 289 6.8E-103 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 Hamap MF_01987 Ribokinase [rbsK]. 2 291 23.911 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 UP17_24800 54ee465a3fc6ff1f0931bc90a1cb00c8 293 Pfam PF00294 pfkB family carbohydrate kinase 2 284 1.3E-69 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB UP17_17805 71ccf8d8b076df07e71e0885d9a64c85 170 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 148 2.3E-32 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 UP17_17805 71ccf8d8b076df07e71e0885d9a64c85 170 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 145 6.8E-31 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 UP17_17805 71ccf8d8b076df07e71e0885d9a64c85 170 SUPERFAMILY SSF56300 1 164 3.93E-44 T 11-10-2018 UP17_17805 71ccf8d8b076df07e71e0885d9a64c85 170 Gene3D G3DSA:3.60.21.10 1 169 6.1E-47 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like UP17_19260 2e809c4a603ef460c44d2e4983a84ca7 285 Gene3D G3DSA:2.160.20.80 166 269 6.4E-18 T 11-10-2018 UP17_19260 2e809c4a603ef460c44d2e4983a84ca7 285 Pfam PF00805 Pentapeptide repeats (8 copies) 212 251 9.5E-12 T 11-10-2018 IPR001646 Pentapeptide repeat UP17_19260 2e809c4a603ef460c44d2e4983a84ca7 285 SUPERFAMILY SSF141571 60 273 6.15E-22 T 11-10-2018 UP17_14080 ed9d7b51516da821f3ccc0b948e6cc30 359 Gene3D G3DSA:3.40.50.2000 177 339 1.1E-40 T 11-10-2018 UP17_14080 ed9d7b51516da821f3ccc0b948e6cc30 359 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 190 346 1.0E-29 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 UP17_14080 ed9d7b51516da821f3ccc0b948e6cc30 359 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 5 355 27.376 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_14080 ed9d7b51516da821f3ccc0b948e6cc30 359 SUPERFAMILY SSF53756 3 342 9.42E-87 T 11-10-2018 UP17_14080 ed9d7b51516da821f3ccc0b948e6cc30 359 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 5 144 1.5E-37 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_14080 ed9d7b51516da821f3ccc0b948e6cc30 359 Gene3D G3DSA:3.40.50.2000 1 176 1.5E-53 T 11-10-2018 UP17_04740 921e49d29d7cd304697d59121318a293 115 SMART SM00418 14 90 1.9E-24 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_04740 921e49d29d7cd304697d59121318a293 115 Gene3D G3DSA:1.10.10.10 1 90 1.2E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04740 921e49d29d7cd304697d59121318a293 115 Pfam PF01022 Bacterial regulatory protein, arsR family 21 66 6.0E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_04740 921e49d29d7cd304697d59121318a293 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 7.6E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_04740 921e49d29d7cd304697d59121318a293 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 35 46 7.6E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_04740 921e49d29d7cd304697d59121318a293 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 16 31 7.6E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_04740 921e49d29d7cd304697d59121318a293 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 7.6E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_04740 921e49d29d7cd304697d59121318a293 115 SUPERFAMILY SSF46785 10 80 1.56E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_07055 1790f470ad0234ec95eab5c3d6bf92b5 60 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 27 55 0.003 T 11-10-2018 IPR035211 Protein of unknown function DUF5325 UP17_07055 1790f470ad0234ec95eab5c3d6bf92b5 60 Pfam PF17259 Family of unknown function (DUF5325) 2 60 1.8E-24 T 11-10-2018 IPR035211 Protein of unknown function DUF5325 UP17_09725 dc2d4d27bd73a0b4fe896d819502f5ba 470 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_09725 dc2d4d27bd73a0b4fe896d819502f5ba 470 Pfam PF00324 Amino acid permease 16 439 2.2E-113 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_09725 dc2d4d27bd73a0b4fe896d819502f5ba 470 PIRSF PIRSF006060 2 468 6.8E-79 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_09725 dc2d4d27bd73a0b4fe896d819502f5ba 470 Gene3D G3DSA:1.20.1740.10 9 467 1.6E-71 T 11-10-2018 UP17_11715 318bfc42432e1e1fe21a3ef4047f10e5 105 Pfam PF12986 Domain of unknown function (DUF3870) 8 99 1.3E-34 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 UP17_03035 b71014e4c20b5fc73dcca6381be67d05 168 Gene3D G3DSA:1.10.1740.10 3 76 1.4E-14 T 11-10-2018 UP17_03035 b71014e4c20b5fc73dcca6381be67d05 168 Gene3D G3DSA:1.10.10.10 84 161 5.6E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03035 b71014e4c20b5fc73dcca6381be67d05 168 Pfam PF08281 Sigma-70, region 4 104 154 4.6E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_03035 b71014e4c20b5fc73dcca6381be67d05 168 SUPERFAMILY SSF88659 96 157 1.21E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_03035 b71014e4c20b5fc73dcca6381be67d05 168 SUPERFAMILY SSF88946 12 90 1.14E-14 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_03035 b71014e4c20b5fc73dcca6381be67d05 168 Pfam PF04542 Sigma-70 region 2 13 74 9.2E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_03035 b71014e4c20b5fc73dcca6381be67d05 168 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 155 4.0E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_14740 b57074079656f3c7d06d38d1001ba9c2 206 SUPERFAMILY SSF51735 1 204 1.57E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_14740 b57074079656f3c7d06d38d1001ba9c2 206 Gene3D G3DSA:3.40.50.720 1 206 5.4E-42 T 11-10-2018 UP17_14740 b57074079656f3c7d06d38d1001ba9c2 206 Pfam PF13460 NAD(P)H-binding 7 193 3.4E-40 T 11-10-2018 IPR016040 NAD(P)-binding domain UP17_21500 00940d7a993ccd21c252df3473ad18d5 338 Pfam PF12698 ABC-2 family transporter protein 19 329 5.9E-37 T 11-10-2018 UP17_12175 99f247678014ff65e0521df07d5093a3 81 Pfam PF02447 GntP family permease 14 77 4.0E-16 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 UP17_03045 dd661a2cc5e8626cc41338ec67a1d470 424 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 67 272 2.4E-48 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_03045 dd661a2cc5e8626cc41338ec67a1d470 424 Pfam PF08388 Group II intron, maturase-specific domain 292 362 9.0E-17 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_03045 dd661a2cc5e8626cc41338ec67a1d470 424 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 11 357 5.6E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_03045 dd661a2cc5e8626cc41338ec67a1d470 424 SUPERFAMILY SSF56672 15 330 4.4E-55 T 11-10-2018 UP17_17420 2ce83d303e338a55d57549f69b1d673f 94 Pfam PF02699 Preprotein translocase subunit 6 81 3.4E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC UP17_17420 2ce83d303e338a55d57549f69b1d673f 94 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 84 3.2E-32 T 11-10-2018 IPR003849 Preprotein translocase YajC UP17_17420 2ce83d303e338a55d57549f69b1d673f 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 1.4E-15 T 11-10-2018 IPR003849 Preprotein translocase YajC UP17_17420 2ce83d303e338a55d57549f69b1d673f 94 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 42 1.4E-15 T 11-10-2018 IPR003849 Preprotein translocase YajC UP17_17420 2ce83d303e338a55d57549f69b1d673f 94 SMART SM01323 2 84 1.8E-41 T 11-10-2018 IPR003849 Preprotein translocase YajC UP17_23435 491537d5c0644861ff7d92076bd8328d 248 Pfam PF12146 Serine aminopeptidase, S33 15 229 2.5E-19 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 UP17_23435 491537d5c0644861ff7d92076bd8328d 248 Gene3D G3DSA:3.40.50.1820 1 246 2.2E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_23435 491537d5c0644861ff7d92076bd8328d 248 SUPERFAMILY SSF53474 12 244 1.04E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_23435 491537d5c0644861ff7d92076bd8328d 248 PIRSF PIRSF017388 1 246 6.5E-94 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 UP17_14270 b932807a1abbcfa5f058de9ffec0375e 282 SUPERFAMILY SSF55729 131 280 4.63E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_14270 b932807a1abbcfa5f058de9ffec0375e 282 Pfam PF00583 Acetyltransferase (GNAT) family 171 232 2.7E-6 T 11-10-2018 IPR000182 GNAT domain UP17_14270 b932807a1abbcfa5f058de9ffec0375e 282 Gene3D G3DSA:3.40.630.30 131 282 4.5E-13 T 11-10-2018 UP17_14270 b932807a1abbcfa5f058de9ffec0375e 282 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 18 280 3.6E-89 T 11-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 UP17_15515 c3805b66f3c0f10b8c458244d1c0fc24 451 Pfam PF14620 YpeB sporulation 14 373 1.0E-126 T 11-10-2018 IPR014239 Spore germination YpeB GO:0009847 UP17_15515 c3805b66f3c0f10b8c458244d1c0fc24 451 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 440 5.4E-138 T 11-10-2018 IPR014239 Spore germination YpeB GO:0009847 UP17_10535 115493fae7a37fafc93b4bee92a0ea0a 453 SUPERFAMILY SSF103473 13 433 1.24E-83 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_10535 115493fae7a37fafc93b4bee92a0ea0a 453 Pfam PF07690 Major Facilitator Superfamily 27 340 1.2E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_11930 676f9ffb4db0315c006f650ed38d8af0 344 Pfam PF02780 Transketolase, C-terminal domain 206 328 8.1E-40 T 11-10-2018 IPR033248 Transketolase, C-terminal domain UP17_11930 676f9ffb4db0315c006f650ed38d8af0 344 SMART SM00861 5 192 2.2E-62 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_11930 676f9ffb4db0315c006f650ed38d8af0 344 Pfam PF02779 Transketolase, pyrimidine binding domain 4 192 6.9E-55 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain UP17_11930 676f9ffb4db0315c006f650ed38d8af0 344 Gene3D G3DSA:3.40.50.970 3 204 2.0E-81 T 11-10-2018 UP17_11930 676f9ffb4db0315c006f650ed38d8af0 344 Gene3D G3DSA:3.40.50.920 205 337 2.4E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_11930 676f9ffb4db0315c006f650ed38d8af0 344 SUPERFAMILY SSF52518 2 216 2.36E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold UP17_11930 676f9ffb4db0315c006f650ed38d8af0 344 SUPERFAMILY SSF52922 200 336 7.98E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 UP17_03710 db45bd3aaf2abe63344434264125297a 240 SMART SM00382 26 221 1.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_03710 db45bd3aaf2abe63344434264125297a 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_03710 db45bd3aaf2abe63344434264125297a 240 PIRSF PIRSF039085 1 240 6.5E-118 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 UP17_03710 db45bd3aaf2abe63344434264125297a 240 Pfam PF00005 ABC transporter 17 165 3.5E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_03710 db45bd3aaf2abe63344434264125297a 240 SUPERFAMILY SSF52540 1 235 5.93E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_03710 db45bd3aaf2abe63344434264125297a 240 Gene3D G3DSA:3.40.50.300 1 240 6.7E-80 T 11-10-2018 UP17_25255 dc33d8c97d9eb3ce97ae648a90f293b1 150 SUPERFAMILY SSF55729 16 137 4.58E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_25255 dc33d8c97d9eb3ce97ae648a90f293b1 150 Pfam PF13673 Acetyltransferase (GNAT) domain 59 138 1.1E-8 T 11-10-2018 IPR000182 GNAT domain UP17_25255 dc33d8c97d9eb3ce97ae648a90f293b1 150 Gene3D G3DSA:3.40.630.30 3 141 2.4E-36 T 11-10-2018 UP17_11055 5c17f7885657cac243290183508b88b1 361 Gene3D G3DSA:3.30.300.210 217 361 2.4E-18 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_11055 5c17f7885657cac243290183508b88b1 361 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 196 358 9.2E-26 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_11055 5c17f7885657cac243290183508b88b1 361 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 360 8.3E-77 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_06715 fcee286fc1ddfea295c6e8d0fc58f08b 341 Pfam PF01757 Acyltransferase family 7 307 9.7E-19 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 UP17_08080 a0b9533168c9b304f62f22277045307b 248 SUPERFAMILY SSF52096 28 227 4.38E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_08080 a0b9533168c9b304f62f22277045307b 248 Gene3D G3DSA:3.90.226.10 36 221 8.8E-31 T 11-10-2018 UP17_08080 a0b9533168c9b304f62f22277045307b 248 Pfam PF00574 Clp protease 43 219 2.4E-32 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA UP17_23605 7abcc02a720634b84938a4c40311645d 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 UP17_23605 7abcc02a720634b84938a4c40311645d 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 256 3.3E-80 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 UP17_23605 7abcc02a720634b84938a4c40311645d 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 18.024 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 UP17_23605 7abcc02a720634b84938a4c40311645d 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 261 4.9E-87 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 UP17_08985 5115a50a71c05829bc49a0736c820974 59 Pfam PF08141 Small acid-soluble spore protein H family 2 58 1.5E-20 T 11-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 UP17_08985 5115a50a71c05829bc49a0736c820974 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 1.0E-6 T 11-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 UP17_18705 7de37acf000bae6eaa4b9b1467081cfd 222 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 157 210 1.2E-12 T 11-10-2018 UP17_10415 61d5ad003ee35de2f2fbe75a871ec6f5 215 Gene3D G3DSA:3.40.50.10230 5 215 1.3E-81 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 UP17_10415 61d5ad003ee35de2f2fbe75a871ec6f5 215 SUPERFAMILY SSF63965 10 212 1.26E-69 T 11-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 UP17_10415 61d5ad003ee35de2f2fbe75a871ec6f5 215 Pfam PF02570 Precorrin-8X methylmutase 17 209 1.9E-75 T 11-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 UP17_17310 add930b8a4dc3228aaf7a41793f57445 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 276 5.5E-46 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 UP17_24715 55112c0fcce214c8f600d2930b1f1339 394 Pfam PF07670 Nucleoside recognition 91 188 1.2E-5 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 UP17_24715 55112c0fcce214c8f600d2930b1f1339 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 1.3E-58 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 UP17_24715 55112c0fcce214c8f600d2930b1f1339 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 4.8E-18 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 UP17_19835 5c2126e004e9e9d9ee38354fc7b8b3c8 120 PIRSF PIRSF002030 1 120 7.8E-45 T 11-10-2018 IPR016339 Truncated hemoglobin, group 1 UP17_19835 5c2126e004e9e9d9ee38354fc7b8b3c8 120 SUPERFAMILY SSF46458 3 119 3.61E-35 T 11-10-2018 IPR009050 Globin-like superfamily UP17_19835 5c2126e004e9e9d9ee38354fc7b8b3c8 120 Gene3D G3DSA:1.10.490.10 1 120 1.4E-41 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 UP17_19835 5c2126e004e9e9d9ee38354fc7b8b3c8 120 Pfam PF01152 Bacterial-like globin 4 118 1.1E-26 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 UP17_10455 ff9cad57adf81b60b86821854fa6f921 187 Pfam PF00881 Nitroreductase family 7 165 2.1E-23 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_10455 ff9cad57adf81b60b86821854fa6f921 187 Gene3D G3DSA:3.40.109.10 1 182 1.9E-38 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_10455 ff9cad57adf81b60b86821854fa6f921 187 SUPERFAMILY SSF55469 1 184 1.23E-33 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_00215 965b6e15432bd147d20b208389a0e509 86 SMART SM00465 5 83 0.0034 T 11-10-2018 IPR000305 GIY-YIG endonuclease UP17_00215 965b6e15432bd147d20b208389a0e509 86 SUPERFAMILY SSF82771 4 76 1.31E-13 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_00215 965b6e15432bd147d20b208389a0e509 86 Pfam PF01541 GIY-YIG catalytic domain 5 77 9.5E-19 T 11-10-2018 IPR000305 GIY-YIG endonuclease UP17_00215 965b6e15432bd147d20b208389a0e509 86 Gene3D G3DSA:3.40.1440.10 1 86 5.2E-34 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 UP17_06385 8fae5f94ee5e6c33784043a80dc0f0af 462 Gene3D G3DSA:1.20.1740.10 1 462 4.2E-56 T 11-10-2018 UP17_06385 8fae5f94ee5e6c33784043a80dc0f0af 462 PIRSF PIRSF006060 2 462 5.1E-47 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_06385 8fae5f94ee5e6c33784043a80dc0f0af 462 Pfam PF13520 Amino acid permease 9 430 4.1E-46 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_22115 85bf2a6d156d37900799fe4f554b2f08 266 Gene3D G3DSA:1.10.3720.10 62 266 7.7E-26 T 11-10-2018 IPR035906 MetI-like superfamily UP17_22115 85bf2a6d156d37900799fe4f554b2f08 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 263 2.4E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_22115 85bf2a6d156d37900799fe4f554b2f08 266 SUPERFAMILY SSF161098 69 256 1.7E-31 T 11-10-2018 IPR035906 MetI-like superfamily UP17_03025 106580577e0588cd5706562f4babd0ce 203 SUPERFAMILY SSF52317 3 166 2.65E-16 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_03025 106580577e0588cd5706562f4babd0ce 203 Pfam PF03575 Peptidase family S51 5 203 1.7E-25 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 UP17_03025 106580577e0588cd5706562f4babd0ce 203 Gene3D G3DSA:3.40.50.880 1 203 1.3E-42 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_21835 bff0819dbe58812c438dabbfe38606f1 169 PIRSF PIRSF032285 2 168 2.4E-63 T 11-10-2018 IPR011235 MepB-like UP17_21835 bff0819dbe58812c438dabbfe38606f1 169 Pfam PF08877 MepB protein 29 151 2.5E-48 T 11-10-2018 IPR011235 MepB-like UP17_21835 bff0819dbe58812c438dabbfe38606f1 169 Gene3D G3DSA:3.40.1350.140 4 162 7.0E-58 T 11-10-2018 IPR038231 MepB-like superfamily UP17_05410 9fd58e0777a9e8d9865618610bc0c535 356 Gene3D G3DSA:3.30.470.20 215 345 4.2E-7 T 11-10-2018 UP17_05410 9fd58e0777a9e8d9865618610bc0c535 356 SUPERFAMILY SSF56059 119 328 9.17E-17 T 11-10-2018 UP17_05410 9fd58e0777a9e8d9865618610bc0c535 356 Pfam PF14398 YheC/D like ATP-grasp 97 347 7.9E-71 T 11-10-2018 IPR026838 Endospore coat-associated protein YheC/D UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 SUPERFAMILY SSF53335 78 257 1.13E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 Gene3D G3DSA:3.40.50.150 77 277 1.5E-56 T 11-10-2018 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 78 258 3.5E-38 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 1.6E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 PRINTS PR00996 Glutamate methyltransferase family signature 34 47 1.6E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 1.6E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 PRINTS PR00996 Glutamate methyltransferase family signature 71 83 1.6E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 1.6E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 PRINTS PR00996 Glutamate methyltransferase family signature 107 127 1.6E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 61 3.6E-10 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 SUPERFAMILY SSF47757 9 80 5.89E-7 T 11-10-2018 UP17_01245 fee0ce86b893a1ff4a5b8bd2c4eeb063 277 SMART SM00138 12 275 1.2E-31 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 UP17_04625 c638185816d3757f3cf0e46e0203d1e1 419 SUPERFAMILY SSF55781 86 156 5.15E-5 T 11-10-2018 UP17_04625 c638185816d3757f3cf0e46e0203d1e1 419 Gene3D G3DSA:1.10.10.2840 282 413 2.3E-17 T 11-10-2018 UP17_04625 c638185816d3757f3cf0e46e0203d1e1 419 Pfam PF13556 PucR C-terminal helix-turn-helix domain 350 407 1.1E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain UP17_20455 6fed0558422e09c117f815872eba228c 452 Pfam PF13751 Transposase DDE domain 324 441 8.9E-29 T 11-10-2018 IPR025668 Transposase DDE domain UP17_20455 6fed0558422e09c117f815872eba228c 452 Pfam PF05598 Transposase domain (DUF772) 52 127 3.6E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_20210 6fed0558422e09c117f815872eba228c 452 Pfam PF13751 Transposase DDE domain 324 441 8.9E-29 T 11-10-2018 IPR025668 Transposase DDE domain UP17_20210 6fed0558422e09c117f815872eba228c 452 Pfam PF05598 Transposase domain (DUF772) 52 127 3.6E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_20270 3e3f3712b4733b70595edbc04e864333 163 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 15 135 6.6E-47 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_20270 3e3f3712b4733b70595edbc04e864333 163 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 77 89 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_20270 3e3f3712b4733b70595edbc04e864333 163 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 14 136 1.5E-51 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 UP17_20270 3e3f3712b4733b70595edbc04e864333 163 SUPERFAMILY SSF51261 4 157 3.66E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_20270 3e3f3712b4733b70595edbc04e864333 163 Gene3D G3DSA:2.70.70.10 4 162 4.8E-58 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_22830 21df4517bcea70ed840ebd829836d8c1 251 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 116 1.8E-8 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 UP17_22830 21df4517bcea70ed840ebd829836d8c1 251 Gene3D G3DSA:1.20.120.910 1 128 2.8E-33 T 11-10-2018 UP17_22830 21df4517bcea70ed840ebd829836d8c1 251 SUPERFAMILY SSF109635 2 89 3.4E-15 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily UP17_22830 21df4517bcea70ed840ebd829836d8c1 251 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 164 6.3E-61 T 11-10-2018 IPR014240 Regulatory protein, YteA family UP17_22830 21df4517bcea70ed840ebd829836d8c1 251 SUPERFAMILY SSF57716 90 124 3.28E-7 T 11-10-2018 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 Gene3D G3DSA:3.40.50.10490 10 214 2.0E-96 T 11-10-2018 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 43.672 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 SUPERFAMILY SSF52313 6 230 3.27E-100 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 Pfam PF00318 Ribosomal protein S2 9 224 6.2E-102 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 PRINTS PR00395 Ribosomal protein S2 signature 37 46 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 PRINTS PR00395 Ribosomal protein S2 signature 175 186 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 PRINTS PR00395 Ribosomal protein S2 signature 87 104 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 PRINTS PR00395 Ribosomal protein S2 signature 6 24 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 PRINTS PR00395 Ribosomal protein S2 signature 196 210 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 PRINTS PR00395 Ribosomal protein S2 signature 158 175 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 Gene3D G3DSA:1.10.287.610 97 152 2.0E-96 T 11-10-2018 UP17_07925 0d9af1205db56a5e0495d11a53336da4 237 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.8E-113 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_04265 2c28b37d2c1bae880f444fc3df737cba 240 Gene3D G3DSA:1.10.10.1320 2 86 2.4E-6 T 11-10-2018 UP17_04265 2c28b37d2c1bae880f444fc3df737cba 240 Pfam PF10099 Anti-sigma-K factor rskA 100 234 5.3E-14 T 11-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 UP17_21185 006246916c8af04956661186adf80bd3 175 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 8 164 4.0E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_21185 006246916c8af04956661186adf80bd3 175 Gene3D G3DSA:1.10.1740.10 1 75 4.7E-19 T 11-10-2018 UP17_21185 006246916c8af04956661186adf80bd3 175 Gene3D G3DSA:1.10.10.10 88 169 4.0E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21185 006246916c8af04956661186adf80bd3 175 SUPERFAMILY SSF88659 91 166 1.57E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_21185 006246916c8af04956661186adf80bd3 175 Pfam PF04542 Sigma-70 region 2 12 78 3.2E-10 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_21185 006246916c8af04956661186adf80bd3 175 Pfam PF08281 Sigma-70, region 4 109 156 3.3E-11 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_21185 006246916c8af04956661186adf80bd3 175 SUPERFAMILY SSF88946 7 83 9.42E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_16050 b9e352d30deb5b817bd720e330a42543 430 Pfam PF05580 SpoIVB peptidase S55 205 413 3.8E-87 T 11-10-2018 IPR008763 Peptidase S55, SpoIVB UP17_16050 b9e352d30deb5b817bd720e330a42543 430 Gene3D G3DSA:2.30.42.10 136 214 9.6E-14 T 11-10-2018 UP17_16050 b9e352d30deb5b817bd720e330a42543 430 SMART SM00228 119 188 2.3E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_16050 b9e352d30deb5b817bd720e330a42543 430 Pfam PF13180 PDZ domain 137 191 2.2E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_16050 b9e352d30deb5b817bd720e330a42543 430 SUPERFAMILY SSF50494 350 412 8.65E-7 T 11-10-2018 IPR009003 Peptidase S1, PA clan UP17_16050 b9e352d30deb5b817bd720e330a42543 430 SUPERFAMILY SSF50156 138 220 3.15E-9 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_16050 b9e352d30deb5b817bd720e330a42543 430 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 7 418 3.9E-170 T 11-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B UP17_22565 d1d8628c809c6a7d8153c677aa8bb841 89 Gene3D G3DSA:4.10.830.10 30 89 2.7E-27 T 11-10-2018 UP17_22565 d1d8628c809c6a7d8153c677aa8bb841 89 SUPERFAMILY SSF57716 2 89 4.99E-32 T 11-10-2018 UP17_22565 d1d8628c809c6a7d8153c677aa8bb841 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 24.649 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid UP17_22565 d1d8628c809c6a7d8153c677aa8bb841 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 UP17_22565 d1d8628c809c6a7d8153c677aa8bb841 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 2.3E-30 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 UP17_17215 4b752586090ab13f7b9878f3c287dd8f 369 Gene3D G3DSA:3.40.50.2000 25 366 4.0E-80 T 11-10-2018 UP17_17215 4b752586090ab13f7b9878f3c287dd8f 369 Pfam PF13477 Glycosyl transferase 4-like 3 145 3.9E-17 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 UP17_17215 4b752586090ab13f7b9878f3c287dd8f 369 Pfam PF00534 Glycosyl transferases group 1 182 346 1.3E-40 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_17215 4b752586090ab13f7b9878f3c287dd8f 369 SUPERFAMILY SSF53756 17 366 1.33E-74 T 11-10-2018 UP17_17215 4b752586090ab13f7b9878f3c287dd8f 369 Gene3D G3DSA:3.40.50.2000 169 353 4.0E-80 T 11-10-2018 UP17_22095 9f86204a4359c08a055a43aad14bdc0c 80 Gene3D G3DSA:2.40.240.20 1 77 1.7E-34 T 11-10-2018 UP17_22095 9f86204a4359c08a055a43aad14bdc0c 80 SUPERFAMILY SSF88697 1 80 3.53E-30 T 11-10-2018 IPR015947 PUA-like superfamily UP17_22095 9f86204a4359c08a055a43aad14bdc0c 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 2.3E-36 T 11-10-2018 IPR019699 Protein of unknown function DUF2584 UP17_11640 1ba037a1b5751ec99b741f4c69ce054f 121 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 92 3.9E-20 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 UP17_15895 2da9b88ecc8aad3b069c8f93879b5747 331 Gene3D G3DSA:3.40.50.2300 151 323 4.6E-91 T 11-10-2018 UP17_15895 2da9b88ecc8aad3b069c8f93879b5747 331 Pfam PF04392 ABC transporter substrate binding protein 42 330 2.6E-85 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein UP17_15895 2da9b88ecc8aad3b069c8f93879b5747 331 Gene3D G3DSA:3.40.50.2300 52 302 4.6E-91 T 11-10-2018 UP17_15895 2da9b88ecc8aad3b069c8f93879b5747 331 SUPERFAMILY SSF53822 53 301 1.96E-15 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_22050 1f455206d61141d66ff584f902ee8fad 438 Gene3D G3DSA:3.40.50.2000 243 420 2.0E-29 T 11-10-2018 UP17_22050 1f455206d61141d66ff584f902ee8fad 438 Pfam PF00534 Glycosyl transferases group 1 254 414 9.4E-18 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_22050 1f455206d61141d66ff584f902ee8fad 438 SUPERFAMILY SSF53756 17 436 7.85E-43 T 11-10-2018 UP17_10020 660ce97b4374f9c32780d05e0f0a15f8 344 Gene3D G3DSA:1.10.3470.10 13 342 3.0E-86 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_10020 660ce97b4374f9c32780d05e0f0a15f8 344 Pfam PF01032 FecCD transport family 30 339 1.9E-87 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 UP17_10020 660ce97b4374f9c32780d05e0f0a15f8 344 SUPERFAMILY SSF81345 18 339 3.27E-78 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_17870 84e65024cc9cb3cfd6ef62383c859a6b 156 Pfam PF10702 Protein of unknown function (DUF2507) 27 149 7.8E-47 T 11-10-2018 IPR019642 Protein of unknown function DUF2507 UP17_17870 84e65024cc9cb3cfd6ef62383c859a6b 156 Gene3D G3DSA:3.30.1380.20 3 156 4.8E-55 T 11-10-2018 UP17_17870 84e65024cc9cb3cfd6ef62383c859a6b 156 SUPERFAMILY SSF111126 11 135 4.45E-23 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily UP17_24450 f6ee79beb4447e3925362201dc626a6e 477 Pfam PF13091 PLD-like domain 298 440 4.4E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 UP17_24450 f6ee79beb4447e3925362201dc626a6e 477 SUPERFAMILY SSF56024 63 252 5.23E-10 T 11-10-2018 UP17_24450 f6ee79beb4447e3925362201dc626a6e 477 SUPERFAMILY SSF56024 290 442 7.63E-19 T 11-10-2018 UP17_24450 f6ee79beb4447e3925362201dc626a6e 477 Gene3D G3DSA:3.30.870.10 288 447 4.0E-27 T 11-10-2018 UP17_04595 ce7cae3a83bf4d411adbc397ca0a28ba 204 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 11 196 32.922 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 UP17_04595 ce7cae3a83bf4d411adbc397ca0a28ba 204 SUPERFAMILY SSF50486 7 198 7.53E-64 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 UP17_04595 ce7cae3a83bf4d411adbc397ca0a28ba 204 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 9 196 1.0E-73 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 UP17_04595 ce7cae3a83bf4d411adbc397ca0a28ba 204 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 12 193 9.6E-59 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 UP17_04595 ce7cae3a83bf4d411adbc397ca0a28ba 204 Gene3D G3DSA:3.10.300.10 4 203 2.8E-64 T 11-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 UP17_13150 c0e930585d32c3d594e8687efd3e59f5 485 Pfam PF00171 Aldehyde dehydrogenase family 18 479 1.2E-147 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_13150 c0e930585d32c3d594e8687efd3e59f5 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_13150 c0e930585d32c3d594e8687efd3e59f5 485 Gene3D G3DSA:3.40.309.10 255 454 2.2E-152 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_13150 c0e930585d32c3d594e8687efd3e59f5 485 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 11 485 5.1E-186 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 UP17_13150 c0e930585d32c3d594e8687efd3e59f5 485 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 4 485 70.955 T 11-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 UP17_13150 c0e930585d32c3d594e8687efd3e59f5 485 Gene3D G3DSA:3.40.605.10 26 462 2.2E-152 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_13150 c0e930585d32c3d594e8687efd3e59f5 485 SUPERFAMILY SSF53720 7 484 1.31E-150 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 90 169 7.6E-28 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 Gene3D G3DSA:2.40.500.20 171 290 5.8E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 Gene3D G3DSA:1.10.287.990 107 169 5.0E-24 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 177 276 8.1E-34 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 PRINTS PR01703 Manganese superoxide dismutase signature 244 256 6.8E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 PRINTS PR01703 Manganese superoxide dismutase signature 206 214 6.8E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 PRINTS PR01703 Manganese superoxide dismutase signature 114 127 6.8E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 PRINTS PR01703 Manganese superoxide dismutase signature 153 166 6.8E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 PRINTS PR01703 Manganese superoxide dismutase signature 93 104 6.8E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 246 253 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 SUPERFAMILY SSF46609 85 171 1.7E-30 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_15670 1d3392deaf3db5620e816a004e54fdf9 291 SUPERFAMILY SSF54719 169 283 6.15E-40 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 UP17_09105 03701af6ad5df151285ef3c116a84756 289 SUPERFAMILY SSF161111 10 210 4.84E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_09105 03701af6ad5df151285ef3c116a84756 289 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 288 1.7E-63 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_09105 03701af6ad5df151285ef3c116a84756 289 SUPERFAMILY SSF160240 212 288 2.35E-18 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 UP17_09105 03701af6ad5df151285ef3c116a84756 289 Pfam PF01545 Cation efflux family 17 208 1.8E-44 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 UP17_09105 03701af6ad5df151285ef3c116a84756 289 Pfam PF16916 Dimerisation domain of Zinc Transporter 214 288 1.4E-16 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain UP17_09105 03701af6ad5df151285ef3c116a84756 289 Gene3D G3DSA:1.20.1510.10 12 208 7.5E-52 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily UP17_09105 03701af6ad5df151285ef3c116a84756 289 Gene3D G3DSA:3.30.70.1350 209 289 4.2E-16 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 UP17_25440 abbcb82854e6c0c86d03a2e249c8a6ae 81 SMART SM00966 7 52 1.4E-7 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_25440 abbcb82854e6c0c86d03a2e249c8a6ae 81 Gene3D G3DSA:2.10.260.10 1 77 3.1E-9 T 11-10-2018 UP17_25440 abbcb82854e6c0c86d03a2e249c8a6ae 81 SUPERFAMILY SSF89447 4 61 7.32E-12 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily UP17_25440 abbcb82854e6c0c86d03a2e249c8a6ae 81 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 49 3.8E-7 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 UP17_12375 99a79edf67def224c3ce0c7c043a219d 275 Pfam PF03116 NQR2, RnfD, RnfE family 130 260 1.9E-9 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 UP17_12375 99a79edf67def224c3ce0c7c043a219d 275 Pfam PF03116 NQR2, RnfD, RnfE family 15 123 9.9E-9 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 UP17_21765 9f87942e98f39279668adb44be6ba460 203 Pfam PF09335 SNARE associated Golgi protein 32 157 4.0E-19 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_09990 84d5fdf690a95859c4e1e39b005971e2 380 Pfam PF03600 Citrate transporter 36 311 1.9E-19 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 UP17_15020 e20130a281893fc6913b7cee794fc332 223 SUPERFAMILY SSF53098 73 208 1.52E-17 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_15020 e20130a281893fc6913b7cee794fc332 223 Gene3D G3DSA:3.30.420.10 73 217 4.7E-26 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_15020 e20130a281893fc6913b7cee794fc332 223 Pfam PF13456 Reverse transcriptase-like 78 205 1.5E-15 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 UP17_13955 2bdde2d9bfd0edf019aa79f93d75fe9e 188 Pfam PF13302 Acetyltransferase (GNAT) domain 11 156 2.8E-22 T 11-10-2018 IPR000182 GNAT domain UP17_13955 2bdde2d9bfd0edf019aa79f93d75fe9e 188 SUPERFAMILY SSF55729 4 181 6.97E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_13955 2bdde2d9bfd0edf019aa79f93d75fe9e 188 Gene3D G3DSA:3.40.630.30 2 187 4.3E-39 T 11-10-2018 UP17_25560 5311b022498caff21c2fe70b2c77c895 540 Gene3D G3DSA:3.40.190.10 67 282 5.5E-139 T 11-10-2018 UP17_25560 5311b022498caff21c2fe70b2c77c895 540 Gene3D G3DSA:3.10.105.10 283 507 5.5E-139 T 11-10-2018 UP17_25560 5311b022498caff21c2fe70b2c77c895 540 PIRSF PIRSF002741 3 534 1.9E-98 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 UP17_25560 5311b022498caff21c2fe70b2c77c895 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 455 1.2E-89 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain UP17_25560 5311b022498caff21c2fe70b2c77c895 540 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 39 537 5.6E-217 T 11-10-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 UP17_25560 5311b022498caff21c2fe70b2c77c895 540 SUPERFAMILY SSF53850 44 527 1.43E-121 T 11-10-2018 UP17_16520 8a4259021999c7dc49d72d95993e2d2d 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 309 2.5E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_16520 8a4259021999c7dc49d72d95993e2d2d 312 SUPERFAMILY SSF161098 33 305 3.82E-37 T 11-10-2018 IPR035906 MetI-like superfamily UP17_16520 8a4259021999c7dc49d72d95993e2d2d 312 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 27 308 1.2E-80 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 UP17_16520 8a4259021999c7dc49d72d95993e2d2d 312 Gene3D G3DSA:1.10.3720.10 81 311 2.0E-38 T 11-10-2018 IPR035906 MetI-like superfamily UP17_06015 7621b51fc0963327f00b847758bbafe5 403 PIRSF PIRSF007487 1 383 2.1E-73 T 11-10-2018 IPR021176 Competence-induced protein CoiA UP17_06015 7621b51fc0963327f00b847758bbafe5 403 Pfam PF06054 Competence protein CoiA-like family 1 206 4.1E-58 T 11-10-2018 IPR010330 Competence-induced protein CoiA-like UP17_21630 c0ec702fdbfef38c586e6d360bd4683f 123 SMART SM00418 8 86 1.2E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_21630 c0ec702fdbfef38c586e6d360bd4683f 123 Pfam PF12840 Helix-turn-helix domain 8 66 1.2E-12 T 11-10-2018 UP17_21630 c0ec702fdbfef38c586e6d360bd4683f 123 SUPERFAMILY SSF46785 7 108 5.84E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_21630 c0ec702fdbfef38c586e6d360bd4683f 123 Gene3D G3DSA:1.10.10.10 2 109 9.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21630 c0ec702fdbfef38c586e6d360bd4683f 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 2.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_21630 c0ec702fdbfef38c586e6d360bd4683f 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 2.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_21630 c0ec702fdbfef38c586e6d360bd4683f 123 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 2.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_09485 49c20533abc077f8e27868fc75090505 101 SUPERFAMILY SSF53187 1 76 1.53E-17 T 11-10-2018 UP17_09485 49c20533abc077f8e27868fc75090505 101 Pfam PF01546 Peptidase family M20/M25/M40 16 75 1.7E-7 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_09485 49c20533abc077f8e27868fc75090505 101 Gene3D G3DSA:3.40.630.10 1 101 3.8E-20 T 11-10-2018 UP17_15400 13fd646efbed19a5fe6aa9b856ba0428 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site UP17_15400 13fd646efbed19a5fe6aa9b856ba0428 320 Pfam PF00348 Polyprenyl synthetase 31 263 1.4E-66 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 UP17_15400 13fd646efbed19a5fe6aa9b856ba0428 320 SUPERFAMILY SSF48576 7 319 2.4E-82 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily UP17_15400 13fd646efbed19a5fe6aa9b856ba0428 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site UP17_15400 13fd646efbed19a5fe6aa9b856ba0428 320 Gene3D G3DSA:1.10.600.10 7 320 2.9E-97 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily UP17_15400 13fd646efbed19a5fe6aa9b856ba0428 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 3.7E-159 T 11-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 UP17_24485 1875fc085c50e098bbdfea43721cbabf 115 Gene3D G3DSA:2.70.180.10 1 115 5.2E-47 T 11-10-2018 IPR036492 Hypothetical protein YojF superfamily UP17_24485 1875fc085c50e098bbdfea43721cbabf 115 Pfam PF08830 Protein of unknown function (DUF1806) 3 114 6.2E-52 T 11-10-2018 IPR014934 Protein of unknown function DUF1806 UP17_24485 1875fc085c50e098bbdfea43721cbabf 115 SUPERFAMILY SSF89442 1 115 9.68E-53 T 11-10-2018 IPR036492 Hypothetical protein YojF superfamily UP17_08660 f30eb61a548f1a6392723eafb6f8ed8e 447 Gene3D G3DSA:3.30.43.10 8 87 6.5E-22 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 UP17_08660 f30eb61a548f1a6392723eafb6f8ed8e 447 Pfam PF01565 FAD binding domain 33 167 3.0E-29 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 UP17_08660 f30eb61a548f1a6392723eafb6f8ed8e 447 SUPERFAMILY SSF56176 8 202 7.94E-46 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_08660 f30eb61a548f1a6392723eafb6f8ed8e 447 Pfam PF08031 Berberine and berberine like 400 444 3.6E-20 T 11-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 UP17_08660 f30eb61a548f1a6392723eafb6f8ed8e 447 Gene3D G3DSA:3.40.462.20 204 398 4.0E-90 T 11-10-2018 UP17_08660 f30eb61a548f1a6392723eafb6f8ed8e 447 Gene3D G3DSA:3.30.465.50 93 444 4.0E-90 T 11-10-2018 UP17_05195 f87d1980bea373242572bb7ea8581e3a 102 Gene3D G3DSA:3.30.1340.10 5 87 1.9E-6 T 11-10-2018 IPR035895 HPr-like superfamily UP17_05195 f87d1980bea373242572bb7ea8581e3a 102 SUPERFAMILY SSF55594 14 86 8.5E-5 T 11-10-2018 IPR035895 HPr-like superfamily UP17_18350 9f3e3849dd502fc5c087b3c50144dde4 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 243 3.3E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_18350 9f3e3849dd502fc5c087b3c50144dde4 260 Gene3D G3DSA:1.10.3720.10 51 247 4.0E-22 T 11-10-2018 IPR035906 MetI-like superfamily UP17_18350 9f3e3849dd502fc5c087b3c50144dde4 260 SUPERFAMILY SSF161098 53 233 5.76E-28 T 11-10-2018 IPR035906 MetI-like superfamily UP17_24075 70a0bd9c946b72e4e039080786c0182a 249 Gene3D G3DSA:3.30.360.40 176 249 1.4E-23 T 11-10-2018 UP17_24075 70a0bd9c946b72e4e039080786c0182a 249 Gene3D G3DSA:3.30.2030.10 34 175 2.9E-39 T 11-10-2018 UP17_24075 70a0bd9c946b72e4e039080786c0182a 249 Pfam PF08680 TATA-box binding 50 249 2.3E-45 T 11-10-2018 IPR014794 TATA-box binding UP17_24075 70a0bd9c946b72e4e039080786c0182a 249 SUPERFAMILY SSF143842 44 246 1.44E-43 T 11-10-2018 IPR036209 YwmB-like superfamily UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 Pfam PF07687 Peptidase dimerisation domain 221 319 1.2E-4 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 SUPERFAMILY SSF55031 218 334 1.05E-25 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 SUPERFAMILY SSF53187 12 414 7.29E-81 T 11-10-2018 UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 Pfam PF01546 Peptidase family M20/M25/M40 83 411 3.6E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 16 413 8.9E-134 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 PIRSF PIRSF001235 8 415 2.0E-134 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 Gene3D G3DSA:3.30.70.360 218 332 4.7E-133 T 11-10-2018 UP17_04860 17ec623fdf05262b10651d11acfeb6f7 415 Gene3D G3DSA:3.40.630.10 25 406 4.7E-133 T 11-10-2018 UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 SUPERFAMILY SSF52540 2 255 1.18E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 Pfam PF00005 ABC transporter 18 184 7.6E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 Pfam PF12848 ABC transporter 224 303 7.9E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 Gene3D G3DSA:3.40.50.300 284 539 8.4E-45 T 11-10-2018 UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 SUPERFAMILY SSF52540 297 530 3.94E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 Gene3D G3DSA:3.40.50.300 1 278 1.4E-59 T 11-10-2018 UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 Pfam PF00005 ABC transporter 335 468 9.7E-16 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 SMART SM00382 344 525 0.0028 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13660 9518a4bb582fcec27af4cdb71c131be7 539 SMART SM00382 26 238 2.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_21725 3d5d1fb18ad6fb0df46f0311435eeb65 249 Pfam PF13476 AAA domain 35 94 3.2E-6 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain UP17_21725 3d5d1fb18ad6fb0df46f0311435eeb65 249 Gene3D G3DSA:3.40.50.300 30 82 1.6E-6 T 11-10-2018 UP17_21725 3d5d1fb18ad6fb0df46f0311435eeb65 249 SUPERFAMILY SSF52540 30 214 2.2E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_21725 3d5d1fb18ad6fb0df46f0311435eeb65 249 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 152 205 7.4E-9 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 UP17_21725 3d5d1fb18ad6fb0df46f0311435eeb65 249 Gene3D G3DSA:3.40.50.300 83 231 2.8E-12 T 11-10-2018 UP17_21725 3d5d1fb18ad6fb0df46f0311435eeb65 249 SMART SM00382 40 218 5.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_21365 03edd5d3da4c3c64d1be821f66cbf285 442 Pfam PF08388 Group II intron, maturase-specific domain 346 412 1.4E-4 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_21365 03edd5d3da4c3c64d1be821f66cbf285 442 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 85 316 3.4E-45 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_21365 03edd5d3da4c3c64d1be821f66cbf285 442 SUPERFAMILY SSF56672 36 401 5.19E-54 T 11-10-2018 UP17_21365 03edd5d3da4c3c64d1be821f66cbf285 442 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 40 402 1.6E-109 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_15085 2d039b8829a654e5a8a8d48b22dac82d 637 Gene3D G3DSA:3.40.50.300 466 629 4.1E-23 T 11-10-2018 UP17_15085 2d039b8829a654e5a8a8d48b22dac82d 637 Pfam PF13307 Helicase C-terminal domain 486 630 4.7E-22 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 UP17_15085 2d039b8829a654e5a8a8d48b22dac82d 637 SUPERFAMILY SSF52540 51 620 3.18E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_15085 2d039b8829a654e5a8a8d48b22dac82d 637 Gene3D G3DSA:3.40.50.300 36 318 5.6E-29 T 11-10-2018 UP17_15085 2d039b8829a654e5a8a8d48b22dac82d 637 SMART SM00491 493 623 1.2E-10 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 UP17_03465 cc690a550f1fdbf6a758e4c25afa2536 79 Pfam PF13396 Phospholipase_D-nuclease N-terminal 31 73 3.4E-11 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal UP17_24295 f750d1c867bad9a6a337fc443115c1c5 176 Gene3D G3DSA:3.40.50.10490 1 173 6.5E-59 T 11-10-2018 UP17_24295 f750d1c867bad9a6a337fc443115c1c5 176 Pfam PF10740 Domain of unknown function (DUF2529) 1 169 6.6E-62 T 11-10-2018 IPR019676 Domain of unknown function (DUF2529) UP17_24295 f750d1c867bad9a6a337fc443115c1c5 176 SUPERFAMILY SSF53697 13 156 5.68E-5 T 11-10-2018 UP17_13205 69bbf2c4e0dd0e390b5c7c4ccde69bd8 186 SUPERFAMILY SSF55729 4 174 3.42E-43 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_13205 69bbf2c4e0dd0e390b5c7c4ccde69bd8 186 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 6.3E-28 T 11-10-2018 IPR000182 GNAT domain UP17_13205 69bbf2c4e0dd0e390b5c7c4ccde69bd8 186 Gene3D G3DSA:3.40.630.30 4 175 2.3E-43 T 11-10-2018 UP17_22060 17371d31b8b7e9e1dadf27bcd05f715d 378 Gene3D G3DSA:3.40.50.2000 193 353 9.1E-151 T 11-10-2018 UP17_22060 17371d31b8b7e9e1dadf27bcd05f715d 378 Gene3D G3DSA:3.40.50.2000 8 364 9.1E-151 T 11-10-2018 UP17_22060 17371d31b8b7e9e1dadf27bcd05f715d 378 SUPERFAMILY SSF53756 5 369 4.89E-135 T 11-10-2018 UP17_22060 17371d31b8b7e9e1dadf27bcd05f715d 378 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 369 7.8E-160 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 UP17_22060 17371d31b8b7e9e1dadf27bcd05f715d 378 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 30 366 4.9E-118 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 UP17_17750 9884e15d16be8f848ffe1532d60ec824 91 Pfam PF14542 GCN5-related N-acetyl-transferase 12 88 2.8E-22 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase UP17_17750 9884e15d16be8f848ffe1532d60ec824 91 Gene3D G3DSA:3.40.630.30 1 91 2.2E-27 T 11-10-2018 UP17_17750 9884e15d16be8f848ffe1532d60ec824 91 SUPERFAMILY SSF55729 5 90 1.03E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_15375 a9215d7e3f19cdd3bf13ff42c43fbf1f 122 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 2 118 3.4E-44 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_15375 a9215d7e3f19cdd3bf13ff42c43fbf1f 122 Gene3D G3DSA:3.30.1330.40 1 122 1.1E-46 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_15375 a9215d7e3f19cdd3bf13ff42c43fbf1f 122 SUPERFAMILY SSF55298 2 120 2.12E-43 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 UP17_15375 a9215d7e3f19cdd3bf13ff42c43fbf1f 122 Pfam PF07736 Chorismate mutase type I 2 118 8.9E-45 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_15375 a9215d7e3f19cdd3bf13ff42c43fbf1f 122 PIRSF PIRSF005965 1 122 1.5E-46 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_15375 a9215d7e3f19cdd3bf13ff42c43fbf1f 122 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 8 119 2.0E-30 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 UP17_10070 8d7485f5499b23536efab170a57e140f 223 SUPERFAMILY SSF143081 2 222 7.59E-72 T 11-10-2018 IPR036590 SOS response associated peptidase-like UP17_10070 8d7485f5499b23536efab170a57e140f 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 210 3.0E-68 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) UP17_10070 8d7485f5499b23536efab170a57e140f 223 Gene3D G3DSA:3.90.1680.10 3 223 2.8E-72 T 11-10-2018 IPR036590 SOS response associated peptidase-like UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 6.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 6.2E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 SUPERFAMILY SSF51735 3 242 3.68E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 240 2.5E-53 T 11-10-2018 UP17_03020 3e1f3a62de4f3c6d4db93ec671706952 244 Gene3D G3DSA:3.40.50.720 1 243 2.0E-63 T 11-10-2018 UP17_21740 54246eebf0ddec128d1eea6b2174966c 95 Gene3D G3DSA:3.90.1300.10 1 69 1.7E-15 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UP17_21740 54246eebf0ddec128d1eea6b2174966c 95 SUPERFAMILY SSF75304 4 65 3.53E-10 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 UP17_23590 0e6610f03955811a09d85206f2ab23b8 172 Gene3D G3DSA:2.160.10.10 39 171 1.9E-27 T 11-10-2018 UP17_23590 0e6610f03955811a09d85206f2ab23b8 172 SUPERFAMILY SSF51161 11 159 1.19E-31 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily UP17_23590 0e6610f03955811a09d85206f2ab23b8 172 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 1.1E-8 T 11-10-2018 IPR001451 Hexapeptide repeat UP17_12665 57ab96bcbc2a185c372a799949a77bdd 455 Pfam PF00092 von Willebrand factor type A domain 150 330 7.9E-13 T 11-10-2018 IPR002035 von Willebrand factor, type A UP17_12665 57ab96bcbc2a185c372a799949a77bdd 455 Gene3D G3DSA:3.40.50.410 144 341 1.1E-31 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily UP17_12665 57ab96bcbc2a185c372a799949a77bdd 455 SUPERFAMILY SSF53300 139 340 2.5E-26 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily UP17_12665 57ab96bcbc2a185c372a799949a77bdd 455 SMART SM00327 147 331 4.3E-16 T 11-10-2018 IPR002035 von Willebrand factor, type A UP17_06580 b05692f974b3be51d9abe9b150e00a7f 127 Gene3D G3DSA:1.10.10.10 9 122 5.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_06580 b05692f974b3be51d9abe9b150e00a7f 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 7.4E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_06580 b05692f974b3be51d9abe9b150e00a7f 127 SMART SM00345 16 75 1.4E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_06580 b05692f974b3be51d9abe9b150e00a7f 127 SUPERFAMILY SSF46785 5 79 7.96E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_25405 a419212d5edf0d92fde01e387a0020ae 220 Pfam PF14424 The BURPS668_1122 family of deaminases 49 209 4.8E-16 T 11-10-2018 IPR032721 Deaminases, BURPS668_1122 family UP17_23680 6659d0ef76f56b8d07148f3875458ddf 297 PIRSF PIRSF003097 2 297 6.1E-89 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 UP17_23680 6659d0ef76f56b8d07148f3875458ddf 297 Pfam PF02687 FtsX-like permease family 200 292 1.1E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 UP17_24560 dc1ee3be2675610115e64d4cfa43e2a4 263 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 263 38.636 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 UP17_24560 dc1ee3be2675610115e64d4cfa43e2a4 263 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 11 250 3.8E-41 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 UP17_24560 dc1ee3be2675610115e64d4cfa43e2a4 263 Pfam PF02654 Cobalamin-5-phosphate synthase 11 251 1.1E-52 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 UP17_23380 af98a42a8de1c25d1a7b2f300f2228e2 308 Pfam PF03547 Membrane transport protein 155 299 9.8E-16 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 UP17_17600 a6dff52ef758855ce167b31e8f2437bc 250 Pfam PF01478 Type IV leader peptidase family 105 207 2.2E-19 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 UP17_17600 a6dff52ef758855ce167b31e8f2437bc 250 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 89 1.7E-26 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal UP17_24585 8d90c8210edda5846dbec63407bced94 351 SUPERFAMILY SSF81345 6 346 4.45E-83 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_24585 8d90c8210edda5846dbec63407bced94 351 Gene3D G3DSA:1.10.3470.10 10 351 3.7E-101 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_24585 8d90c8210edda5846dbec63407bced94 351 Pfam PF01032 FecCD transport family 24 346 3.3E-93 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 UP17_16085 c7ac1dc3baf423537d8dfb6c8e2e00d0 450 Pfam PF02601 Exonuclease VII, large subunit 125 439 5.3E-102 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 UP17_16085 c7ac1dc3baf423537d8dfb6c8e2e00d0 450 Pfam PF13742 OB-fold nucleic acid binding domain 7 101 1.1E-29 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 UP17_16085 c7ac1dc3baf423537d8dfb6c8e2e00d0 450 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 442 29.658 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 UP17_16085 c7ac1dc3baf423537d8dfb6c8e2e00d0 450 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 353 1.7E-138 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 UP17_09235 375494ee4662c60d9eb51d7824032599 109 Pfam PF00893 Small Multidrug Resistance protein 4 94 4.0E-32 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 UP17_09235 375494ee4662c60d9eb51d7824032599 109 Gene3D G3DSA:1.10.3730.20 1 109 3.7E-39 T 11-10-2018 UP17_09235 375494ee4662c60d9eb51d7824032599 109 SUPERFAMILY SSF103481 6 106 9.29E-23 T 11-10-2018 UP17_08140 9a901a9d5c811b24dd7c66e19e902187 85 PIRSF PIRSF004764 1 85 1.6E-28 T 11-10-2018 IPR024702 Uncharacterised conserved protein YmfJ UP17_08140 9a901a9d5c811b24dd7c66e19e902187 85 Gene3D G3DSA:1.10.760.20 1 82 2.7E-32 T 11-10-2018 IPR038292 YmfJ/YflH superfamily UP17_08140 9a901a9d5c811b24dd7c66e19e902187 85 Pfam PF11588 Protein of unknown function (DUF3243) 3 80 2.0E-34 T 11-10-2018 IPR021637 Protein of unknown function DUF3243 UP17_04055 bf45cfa42212902c0a4a165dcd0562cf 235 Gene3D G3DSA:1.10.10.10 82 163 2.1E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04055 bf45cfa42212902c0a4a165dcd0562cf 235 Gene3D G3DSA:1.10.1740.10 5 81 1.8E-9 T 11-10-2018 UP17_04055 bf45cfa42212902c0a4a165dcd0562cf 235 Pfam PF08281 Sigma-70, region 4 107 155 3.6E-7 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_04055 bf45cfa42212902c0a4a165dcd0562cf 235 Pfam PF04542 Sigma-70 region 2 19 83 2.0E-9 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_04055 bf45cfa42212902c0a4a165dcd0562cf 235 SUPERFAMILY SSF88946 16 93 3.34E-11 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_04055 bf45cfa42212902c0a4a165dcd0562cf 235 SUPERFAMILY SSF88659 106 162 2.24E-7 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_04055 bf45cfa42212902c0a4a165dcd0562cf 235 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 155 3.0E-12 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_04940 7f3dfb9a2a0f6f0368316c70770eb42c 505 Gene3D G3DSA:3.40.309.10 268 461 7.5E-190 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_04940 7f3dfb9a2a0f6f0368316c70770eb42c 505 Gene3D G3DSA:3.40.605.10 23 489 7.5E-190 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_04940 7f3dfb9a2a0f6f0368316c70770eb42c 505 Pfam PF00171 Aldehyde dehydrogenase family 30 491 1.8E-183 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_04940 7f3dfb9a2a0f6f0368316c70770eb42c 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_04940 7f3dfb9a2a0f6f0368316c70770eb42c 505 SUPERFAMILY SSF53720 16 493 6.02E-175 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_02310 6d7ac6f3a53db02cce3b5d6000dce94e 240 SUPERFAMILY SSF52317 1 220 7.1E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_02310 6d7ac6f3a53db02cce3b5d6000dce94e 240 Pfam PF06283 Trehalose utilisation 2 217 3.4E-36 T 11-10-2018 IPR029010 ThuA-like domain UP17_02310 6d7ac6f3a53db02cce3b5d6000dce94e 240 Gene3D G3DSA:3.40.50.880 1 240 2.3E-114 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_02310 6d7ac6f3a53db02cce3b5d6000dce94e 240 PIRSF PIRSF030013 1 239 9.5E-127 T 11-10-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote UP17_01020 bf1a72734f2fc93f7558fd37dfbebf03 224 Gene3D G3DSA:1.10.10.10 126 224 1.6E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01020 bf1a72734f2fc93f7558fd37dfbebf03 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 4.8E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_01020 bf1a72734f2fc93f7558fd37dfbebf03 224 SMART SM00862 145 220 9.6E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 UP17_01020 bf1a72734f2fc93f7558fd37dfbebf03 224 Gene3D G3DSA:3.40.50.2300 1 125 2.2E-40 T 11-10-2018 UP17_01020 bf1a72734f2fc93f7558fd37dfbebf03 224 Pfam PF00072 Response regulator receiver domain 4 112 8.0E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01020 bf1a72734f2fc93f7558fd37dfbebf03 224 SMART SM00448 2 112 1.1E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_01020 bf1a72734f2fc93f7558fd37dfbebf03 224 SUPERFAMILY SSF52172 1 163 9.39E-45 T 11-10-2018 IPR011006 CheY-like superfamily UP17_16785 46e2b2e38a32ae89cd71e4bd230a2135 383 Pfam PF04055 Radical SAM superfamily 8 177 3.5E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 UP17_16785 46e2b2e38a32ae89cd71e4bd230a2135 383 SMART SM00729 2 223 2.2E-61 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 UP17_16785 46e2b2e38a32ae89cd71e4bd230a2135 383 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 3 351 2.8E-124 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 UP17_16785 46e2b2e38a32ae89cd71e4bd230a2135 383 SUPERFAMILY SSF102114 4 377 1.05E-121 T 11-10-2018 UP17_16785 46e2b2e38a32ae89cd71e4bd230a2135 383 Gene3D G3DSA:3.80.30.20 2 301 1.4E-103 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe UP17_16785 46e2b2e38a32ae89cd71e4bd230a2135 383 Pfam PF06969 HemN C-terminal domain 303 365 1.8E-14 T 11-10-2018 IPR010723 HemN, C-terminal UP17_04630 a2e4da7f721263a88fd6065aca4f9189 332 Pfam PF01384 Phosphate transporter family 22 321 1.1E-90 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 UP17_04970 921aa2fab12be90660deb35eb092f857 321 Pfam PF03060 Nitronate monooxygenase 5 71 2.3E-15 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 UP17_04970 921aa2fab12be90660deb35eb092f857 321 Pfam PF03060 Nitronate monooxygenase 77 302 1.1E-45 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 UP17_04970 921aa2fab12be90660deb35eb092f857 321 SUPERFAMILY SSF51412 4 309 8.39E-65 T 11-10-2018 UP17_04970 921aa2fab12be90660deb35eb092f857 321 Gene3D G3DSA:3.20.20.70 2 315 3.5E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_06175 37cfd6102dbb48fdbd402dbc46c3d849 185 Gene3D G3DSA:1.10.3760.10 3 176 7.1E-66 T 11-10-2018 UP17_06175 37cfd6102dbb48fdbd402dbc46c3d849 185 Pfam PF04608 Phosphatidylglycerophosphatase A 23 160 1.0E-18 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 UP17_06175 37cfd6102dbb48fdbd402dbc46c3d849 185 PIRSF PIRSF019587 6 169 1.3E-64 T 11-10-2018 IPR026038 Putative phosphatidylglycerophosphatase UP17_06175 37cfd6102dbb48fdbd402dbc46c3d849 185 SUPERFAMILY SSF101307 11 164 5.1E-47 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 UP17_11525 b3a462fe2826cc257e40e9e54e302b3b 179 Pfam PF07155 ECF-type riboflavin transporter, S component 13 174 1.9E-44 T 11-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 UP17_11525 b3a462fe2826cc257e40e9e54e302b3b 179 Gene3D G3DSA:1.10.1760.20 10 176 4.5E-43 T 11-10-2018 UP17_23980 9170d17f47a30788cff3090545cbd586 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 74 1.2E-17 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain UP17_23980 9170d17f47a30788cff3090545cbd586 300 Gene3D G3DSA:1.10.3720.10 87 300 1.4E-24 T 11-10-2018 IPR035906 MetI-like superfamily UP17_23980 9170d17f47a30788cff3090545cbd586 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 1.9E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_23980 9170d17f47a30788cff3090545cbd586 300 SUPERFAMILY SSF161098 93 285 2.22E-30 T 11-10-2018 IPR035906 MetI-like superfamily UP17_02325 da71d965d7b61a1a6512410a9eb8b2e9 322 Pfam PF01261 Xylose isomerase-like TIM barrel 19 249 1.0E-30 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain UP17_02325 da71d965d7b61a1a6512410a9eb8b2e9 322 Gene3D G3DSA:3.20.20.150 1 315 1.5E-70 T 11-10-2018 UP17_02325 da71d965d7b61a1a6512410a9eb8b2e9 322 SUPERFAMILY SSF51658 2 311 2.62E-51 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily UP17_02325 da71d965d7b61a1a6512410a9eb8b2e9 322 Pfam PF07582 AP endonuclease family 2 C terminus 268 322 2.8E-22 T 11-10-2018 IPR011418 AP endonuclease, family 2, C-terminal UP17_24745 3bce29a2a2cc8019859951933bf187fe 512 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 148 173 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_24745 3bce29a2a2cc8019859951933bf187fe 512 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 1.2E-90 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_24745 3bce29a2a2cc8019859951933bf187fe 512 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site UP17_24745 3bce29a2a2cc8019859951933bf187fe 512 Gene3D G3DSA:1.20.1730.10 5 504 8.1E-69 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_24745 3bce29a2a2cc8019859951933bf187fe 512 Pfam PF00474 Sodium:solute symporter family 33 434 1.9E-126 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 UP17_15525 3d6f95eba09d8a8c2aa823a8258870b5 228 Pfam PF13367 Protease prsW family 28 197 1.3E-35 T 11-10-2018 IPR026898 Protease PrsW GO:0008233 UP17_15525 3d6f95eba09d8a8c2aa823a8258870b5 228 PIRSF PIRSF016933 1 220 9.2E-84 T 11-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 UP17_25795 5cc2e85a193a1b84cb8c333da1f5237c 288 SMART SM01092 179 283 2.5E-22 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal UP17_25795 5cc2e85a193a1b84cb8c333da1f5237c 288 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 181 280 2.6E-18 T 11-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal UP17_25795 5cc2e85a193a1b84cb8c333da1f5237c 288 SUPERFAMILY SSF55447 179 280 2.62E-20 T 11-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily UP17_25795 5cc2e85a193a1b84cb8c333da1f5237c 288 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 7 172 1.1E-38 T 11-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 UP17_25795 5cc2e85a193a1b84cb8c333da1f5237c 288 Gene3D G3DSA:3.30.390.50 181 283 1.4E-23 T 11-10-2018 UP17_25795 5cc2e85a193a1b84cb8c333da1f5237c 288 SUPERFAMILY SSF56176 5 172 3.6E-41 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 UP17_25795 5cc2e85a193a1b84cb8c333da1f5237c 288 Gene3D G3DSA:3.30.465.10 2 173 1.4E-46 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 UP17_21935 b9eea45279b4861f654fb59cf7fe7f6a 214 Gene3D G3DSA:3.40.50.720 2 214 9.8E-51 T 11-10-2018 UP17_21935 b9eea45279b4861f654fb59cf7fe7f6a 214 Pfam PF13460 NAD(P)H-binding 7 190 1.6E-46 T 11-10-2018 IPR016040 NAD(P)-binding domain UP17_21935 b9eea45279b4861f654fb59cf7fe7f6a 214 SUPERFAMILY SSF51735 1 205 8.73E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_25100 00111f32827484de007d26867a0c7a31 473 Gene3D G3DSA:3.40.605.10 9 469 1.6E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_25100 00111f32827484de007d26867a0c7a31 473 Gene3D G3DSA:3.40.309.10 250 441 1.6E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_25100 00111f32827484de007d26867a0c7a31 473 Pfam PF00171 Aldehyde dehydrogenase family 13 471 5.5E-148 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_25100 00111f32827484de007d26867a0c7a31 473 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_25100 00111f32827484de007d26867a0c7a31 473 SUPERFAMILY SSF53720 4 471 4.06E-141 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_11710 22c7320de47345948f45aadce8de3a84 70 Pfam PF13751 Transposase DDE domain 2 70 5.6E-13 T 11-10-2018 IPR025668 Transposase DDE domain UP17_15445 33203ad07f0bb9481fcda7324a1945e5 76 Pfam PF13751 Transposase DDE domain 3 74 5.1E-18 T 11-10-2018 IPR025668 Transposase DDE domain UP17_00860 e63880669bef956b7b3032143105cab3 175 Gene3D G3DSA:1.10.1760.20 9 172 1.2E-44 T 11-10-2018 UP17_00860 e63880669bef956b7b3032143105cab3 175 Pfam PF07155 ECF-type riboflavin transporter, S component 12 168 4.0E-38 T 11-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 PIRSF PIRSF000149 1 334 2.1E-144 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 Gene3D G3DSA:3.30.360.10 151 315 6.4E-163 T 11-10-2018 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 SUPERFAMILY SSF51735 3 168 5.54E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.4E-141 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.4E-73 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.7E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 SUPERFAMILY SSF55347 152 314 2.41E-75 T 11-10-2018 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 2.4E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 2.4E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 2.4E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 2.4E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.4E-42 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 Gene3D G3DSA:3.40.50.720 4 329 6.4E-163 T 11-10-2018 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_23475 3cfb2a1e28038add80ec937fc0a2d3ae 335 SMART SM00846 3 152 1.6E-100 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 UP17_24980 278ef4851cd435a1a49ae56444ed5110 65 PIRSF PIRSF037263 1 65 4.4E-35 T 11-10-2018 IPR009296 Protein of unknown function DUF951 UP17_24980 278ef4851cd435a1a49ae56444ed5110 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 59 5.7E-30 T 11-10-2018 IPR009296 Protein of unknown function DUF951 UP17_07155 9e56326b4b943ad5b6dd22e4779e8f68 352 SUPERFAMILY SSF55797 233 349 1.34E-17 T 11-10-2018 IPR035940 CAP superfamily UP17_07155 9e56326b4b943ad5b6dd22e4779e8f68 352 Pfam PF14504 CAP-associated N-terminal 68 207 1.9E-50 T 11-10-2018 IPR029410 CAP-associated domain UP17_07155 9e56326b4b943ad5b6dd22e4779e8f68 352 Pfam PF00188 Cysteine-rich secretory protein family 239 348 2.3E-14 T 11-10-2018 IPR014044 CAP domain UP17_07155 9e56326b4b943ad5b6dd22e4779e8f68 352 Gene3D G3DSA:3.40.33.10 34 352 8.5E-100 T 11-10-2018 IPR035940 CAP superfamily UP17_03690 cff4c8efc3b908b4250ba42c1b46a3cd 77 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 51 1.4E-11 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 UP17_05460 a6f9de9733290dfe0f65e3cc1df8b648 288 Gene3D G3DSA:3.75.10.10 2 281 1.1E-77 T 11-10-2018 UP17_05460 a6f9de9733290dfe0f65e3cc1df8b648 288 Pfam PF02274 Amidinotransferase 77 279 5.0E-41 T 11-10-2018 UP17_05460 a6f9de9733290dfe0f65e3cc1df8b648 288 SUPERFAMILY SSF55909 8 280 6.96E-76 T 11-10-2018 UP17_13350 5a92474054fb424c32d33f21b12a417b 274 Pfam PF04321 RmlD substrate binding domain 1 237 1.8E-28 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 UP17_13350 5a92474054fb424c32d33f21b12a417b 274 SUPERFAMILY SSF51735 1 246 1.66E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13350 5a92474054fb424c32d33f21b12a417b 274 Gene3D G3DSA:3.40.50.720 4 214 6.2E-49 T 11-10-2018 UP17_13350 5a92474054fb424c32d33f21b12a417b 274 Gene3D G3DSA:3.90.25.10 160 237 6.2E-49 T 11-10-2018 UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.8E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 255 6.9E-62 T 11-10-2018 UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 TIGRFAM TIGR02415 23BDH: acetoin reductases 6 257 3.5E-107 T 11-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 Gene3D G3DSA:3.40.50.720 5 258 1.3E-91 T 11-10-2018 UP17_11945 67c9f8310fb0fd732f8beeb9138ef880 258 SUPERFAMILY SSF51735 6 255 1.21E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_11770 9a082f991890d6bda47c163933f06fc8 126 Gene3D G3DSA:3.10.180.10 1 125 1.7E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_11770 9a082f991890d6bda47c163933f06fc8 126 SUPERFAMILY SSF54593 1 124 4.65E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_11770 9a082f991890d6bda47c163933f06fc8 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 95 8.2E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_09855 50f67b1b71d37979157987017c440784 61 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 54 2.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_09855 50f67b1b71d37979157987017c440784 61 SUPERFAMILY SSF46689 5 55 1.13E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_09855 50f67b1b71d37979157987017c440784 61 Gene3D G3DSA:1.10.10.60 3 55 6.9E-14 T 11-10-2018 UP17_18475 bbd2fb3e4116a0d2d3446377f3ae65d4 190 Pfam PF12732 YtxH-like protein 29 109 5.2E-19 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH UP17_19900 b8474753797f037f1388d7edefb74685 189 Gene3D G3DSA:3.40.430.10 8 184 2.4E-51 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_19900 b8474753797f037f1388d7edefb74685 189 Pfam PF01872 RibD C-terminal domain 10 180 2.2E-22 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 UP17_19900 b8474753797f037f1388d7edefb74685 189 SUPERFAMILY SSF53597 9 185 2.75E-33 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_08005 e127cedf51fc35525d9d4ae6c91fa8d3 122 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 94 2.0E-37 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 UP17_08005 e127cedf51fc35525d9d4ae6c91fa8d3 122 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 107 28.397 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 UP17_08005 e127cedf51fc35525d9d4ae6c91fa8d3 122 SUPERFAMILY SSF89919 2 110 4.19E-37 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily UP17_08005 e127cedf51fc35525d9d4ae6c91fa8d3 122 Gene3D G3DSA:3.30.300.20 1 116 1.9E-40 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_08005 e127cedf51fc35525d9d4ae6c91fa8d3 122 Pfam PF02033 Ribosome-binding factor A 4 107 9.7E-35 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 UP17_08005 e127cedf51fc35525d9d4ae6c91fa8d3 122 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 3.4E-41 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 UP17_08005 e127cedf51fc35525d9d4ae6c91fa8d3 122 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 UP17_23355 7e486a2b48cee6564117b952a764ef36 234 PIRSF PIRSF006171 5 234 2.5E-79 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 UP17_23355 7e486a2b48cee6564117b952a764ef36 234 Pfam PF00072 Response regulator receiver domain 9 120 3.7E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_23355 7e486a2b48cee6564117b952a764ef36 234 Gene3D G3DSA:3.40.50.12740 7 221 6.4E-29 T 11-10-2018 UP17_23355 7e486a2b48cee6564117b952a764ef36 234 SMART SM00448 7 120 4.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_23355 7e486a2b48cee6564117b952a764ef36 234 SUPERFAMILY SSF52172 6 140 1.35E-32 T 11-10-2018 IPR011006 CheY-like superfamily UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 7.6E-12 T 11-10-2018 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 7.6E-12 T 11-10-2018 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 7.6E-12 T 11-10-2018 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.6E-12 T 11-10-2018 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 Gene3D G3DSA:3.50.50.60 132 249 2.8E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 5 318 2.5E-141 T 11-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 SUPERFAMILY SSF51905 5 264 9.79E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 290 1.3E-106 T 11-10-2018 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 Gene3D G3DSA:3.50.50.60 6 294 2.8E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.2E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.2E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 1.2E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 155 179 1.2E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_15535 16cf7e6ad5cec73a3aa8e65d8bad4d0c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 212 228 1.2E-16 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 UP17_14145 88754079da90b3a1dd49d1519b2eaef1 177 Gene3D G3DSA:2.60.120.10 1 170 3.9E-57 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_14145 88754079da90b3a1dd49d1519b2eaef1 177 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 175 28.547 T 11-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 UP17_14145 88754079da90b3a1dd49d1519b2eaef1 177 SUPERFAMILY SSF51182 6 173 4.95E-29 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_14145 88754079da90b3a1dd49d1519b2eaef1 177 Pfam PF03079 ARD/ARD' family 4 168 8.1E-40 T 11-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 UP17_07250 899077bda06347ac15048b514953ed1f 162 Hamap MF_00824 Uncharacterized N-acetyltransferase . 2 149 41.516 T 11-10-2018 IPR017274 Putative N-acetyltransferase YlbP UP17_07250 899077bda06347ac15048b514953ed1f 162 Pfam PF13508 Acetyltransferase (GNAT) domain 83 130 6.4E-8 T 11-10-2018 IPR000182 GNAT domain UP17_07250 899077bda06347ac15048b514953ed1f 162 Gene3D G3DSA:3.40.630.30 2 160 7.6E-57 T 11-10-2018 UP17_07250 899077bda06347ac15048b514953ed1f 162 PIRSF PIRSF037732 1 162 2.6E-81 T 11-10-2018 IPR017274 Putative N-acetyltransferase YlbP UP17_07250 899077bda06347ac15048b514953ed1f 162 SUPERFAMILY SSF55729 33 141 1.13E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_05055 4bf8b9d7c91c06128791b073597884b5 350 SUPERFAMILY SSF47240 25 350 5.75E-79 T 11-10-2018 IPR009078 Ferritin-like superfamily UP17_05055 4bf8b9d7c91c06128791b073597884b5 350 PIRSF PIRSF000355 1 350 1.4E-94 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05055 4bf8b9d7c91c06128791b073597884b5 350 Pfam PF00268 Ribonucleotide reductase, small chain 33 311 2.6E-71 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_05055 4bf8b9d7c91c06128791b073597884b5 350 Gene3D G3DSA:1.10.620.20 7 340 8.9E-87 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 UP17_17070 7a5716e8b7f5da2e26f1170c2d783985 326 Pfam PF08378 Nuclease-related domain 41 154 1.2E-20 T 11-10-2018 IPR011528 Nuclease-related domain, NERD UP17_17980 987052150cd35bf607273880603ab1e7 309 Pfam PF09557 Domain of unknown function (DUF2382) 177 287 4.8E-28 T 11-10-2018 IPR019060 Domain of unknown function DUF2382 UP17_17980 987052150cd35bf607273880603ab1e7 309 Pfam PF11181 Heat induced stress protein YflT 6 109 1.5E-17 T 11-10-2018 IPR025889 General stress protein 17M-like domain UP17_17980 987052150cd35bf607273880603ab1e7 309 TIGRFAM TIGR02271 TIGR02271: conserved domain 177 291 4.7E-36 T 11-10-2018 IPR019060 Domain of unknown function DUF2382 UP17_04765 d65084b36f1a317697c923d84f06b4b3 266 Gene3D G3DSA:1.10.4030.30 73 265 1.0E-24 T 11-10-2018 UP17_04765 d65084b36f1a317697c923d84f06b4b3 266 SUPERFAMILY SSF109998 77 247 2.65E-27 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily UP17_04765 d65084b36f1a317697c923d84f06b4b3 266 Pfam PF13624 SurA N-terminal domain 76 190 9.4E-18 T 11-10-2018 UP17_13115 ddb6153ce6cce4a453aace0884f333ef 300 Gene3D G3DSA:1.20.1530.20 155 300 1.6E-6 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily UP17_13115 ddb6153ce6cce4a453aace0884f333ef 300 Pfam PF03547 Membrane transport protein 7 138 1.4E-7 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 UP17_13115 ddb6153ce6cce4a453aace0884f333ef 300 Pfam PF03547 Membrane transport protein 157 295 1.2E-16 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 UP17_24760 3fbba8471281c562864a70cdbc54b7e9 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 9.7E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_24760 3fbba8471281c562864a70cdbc54b7e9 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 9.7E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_24760 3fbba8471281c562864a70cdbc54b7e9 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 9.7E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_24760 3fbba8471281c562864a70cdbc54b7e9 268 Pfam PF12697 Alpha/beta hydrolase family 23 258 2.1E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_24760 3fbba8471281c562864a70cdbc54b7e9 268 Gene3D G3DSA:3.40.50.1820 1 266 4.7E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_24760 3fbba8471281c562864a70cdbc54b7e9 268 SUPERFAMILY SSF53474 3 264 1.77E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_23220 a66651fc65c68228f17f3f5dc86e708a 390 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_23220 a66651fc65c68228f17f3f5dc86e708a 390 Pfam PF01098 Cell cycle protein 13 381 1.9E-95 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_23220 a66651fc65c68228f17f3f5dc86e708a 390 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 380 8.2E-102 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_24515 e4e7f4836b6e3ba44fc54d50d80e2194 372 SUPERFAMILY SSF52540 216 314 9.73E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24515 e4e7f4836b6e3ba44fc54d50d80e2194 372 SUPERFAMILY SSF52540 29 66 2.67E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_18670 09f479f4efaa481cf1063c6e9f10ee47 389 Gene3D G3DSA:1.20.1250.20 3 191 1.2E-19 T 11-10-2018 UP17_18670 09f479f4efaa481cf1063c6e9f10ee47 389 Pfam PF07690 Major Facilitator Superfamily 12 322 9.5E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_18670 09f479f4efaa481cf1063c6e9f10ee47 389 Gene3D G3DSA:1.20.1250.20 198 380 1.6E-15 T 11-10-2018 UP17_18670 09f479f4efaa481cf1063c6e9f10ee47 389 SUPERFAMILY SSF103473 3 377 4.58E-48 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_17090 6501726fa8670485ab003fecbdb09300 230 Gene3D G3DSA:3.40.50.300 1 225 3.7E-50 T 11-10-2018 UP17_17090 6501726fa8670485ab003fecbdb09300 230 SUPERFAMILY SSF52540 3 218 5.91E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_17090 6501726fa8670485ab003fecbdb09300 230 Pfam PF00005 ABC transporter 18 153 1.0E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_17090 6501726fa8670485ab003fecbdb09300 230 SMART SM00382 27 203 4.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_22335 e2be8f8941e27369947716a6310449e2 304 SUPERFAMILY SSF103481 188 288 6.67E-12 T 11-10-2018 UP17_22335 e2be8f8941e27369947716a6310449e2 304 SUPERFAMILY SSF103481 39 143 7.98E-16 T 11-10-2018 UP17_22335 e2be8f8941e27369947716a6310449e2 304 Pfam PF00892 EamA-like transporter family 11 139 9.4E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_22335 e2be8f8941e27369947716a6310449e2 304 Pfam PF00892 EamA-like transporter family 150 284 8.2E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_07790 baf8657e7a0e7293611f8fc75d96ac2b 148 Pfam PF02050 Flagellar FliJ protein 21 142 5.4E-18 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 UP17_07790 baf8657e7a0e7293611f8fc75d96ac2b 148 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 142 2.9E-25 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 Gene3D G3DSA:2.30.42.10 107 194 2.6E-89 T 11-10-2018 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 SUPERFAMILY SSF52096 44 377 2.65E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 Pfam PF01471 Putative peptidoglycan binding domain 393 448 2.8E-15 T 11-10-2018 IPR002477 Peptidoglycan binding-like UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 SMART SM00245 180 371 3.7E-80 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 Pfam PF13180 PDZ domain 108 183 9.9E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 Gene3D G3DSA:3.90.226.10 195 368 2.6E-89 T 11-10-2018 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 SUPERFAMILY SSF47090 383 449 8.63E-17 T 11-10-2018 IPR036365 PGBD-like superfamily UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 Gene3D G3DSA:1.10.101.10 377 459 3.2E-16 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 SMART SM00228 107 178 4.4E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 SUPERFAMILY SSF50156 78 197 5.53E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 Pfam PF03572 Peptidase family S41 209 370 4.2E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 Gene3D G3DSA:3.30.750.44 46 346 2.6E-89 T 11-10-2018 UP17_23670 0c15644058b1beb0cbe2982a34c06599 474 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 60 377 1.2E-120 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 UP17_17415 a077343abf4d94e23b419d173cce8534 130 Pfam PF12670 Protein of unknown function (DUF3792) 11 120 1.4E-22 T 11-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane UP17_17415 a077343abf4d94e23b419d173cce8534 130 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 11 123 6.3E-26 T 11-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane UP17_06460 c85a77c1418cd9bf53a6a8cb80c724f2 62 Gene3D G3DSA:1.20.58.990 6 62 1.6E-15 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 UP17_06460 c85a77c1418cd9bf53a6a8cb80c724f2 62 SUPERFAMILY SSF140500 14 54 8.5E-12 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 UP17_06460 c85a77c1418cd9bf53a6a8cb80c724f2 62 Pfam PF09388 Spo0E like sporulation regulatory protein 14 50 2.7E-12 T 11-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 UP17_14540 b9386eb17a7b09f7f6244efcecb64264 207 SUPERFAMILY SSF56529 5 202 2.62E-49 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_14540 b9386eb17a7b09f7f6244efcecb64264 207 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 6 204 3.8E-37 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 UP17_14540 b9386eb17a7b09f7f6244efcecb64264 207 Gene3D G3DSA:3.90.850.10 1 205 2.9E-53 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 UP17_21480 3b900aedcf214bbb89e829c6c892bb88 176 Gene3D G3DSA:3.40.630.30 3 174 6.6E-49 T 11-10-2018 UP17_21480 3b900aedcf214bbb89e829c6c892bb88 176 SUPERFAMILY SSF55729 1 173 6.05E-50 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_21480 3b900aedcf214bbb89e829c6c892bb88 176 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 7.0E-31 T 11-10-2018 IPR000182 GNAT domain UP17_25145 38012c675ba94c2f8d333f73b96b8884 101 Pfam PF07978 NIPSNAP 6 99 4.2E-25 T 11-10-2018 IPR012577 NIPSNAP UP17_25145 38012c675ba94c2f8d333f73b96b8884 101 SUPERFAMILY SSF54909 1 99 1.07E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_25145 38012c675ba94c2f8d333f73b96b8884 101 Gene3D G3DSA:3.30.70.100 5 100 5.5E-6 T 11-10-2018 UP17_09265 f6587e293cb487ff4e1f09fe0e763378 74 SUPERFAMILY SSF47413 3 68 3.49E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_09265 f6587e293cb487ff4e1f09fe0e763378 74 Pfam PF01381 Helix-turn-helix 8 61 8.3E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_09265 f6587e293cb487ff4e1f09fe0e763378 74 SMART SM00530 7 62 2.3E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_09265 f6587e293cb487ff4e1f09fe0e763378 74 Gene3D G3DSA:1.10.260.40 2 72 8.8E-12 T 11-10-2018 UP17_22865 bcf8ff19091c6d779dffbc6adaa7c5e6 207 SMART SM00479 6 183 2.0E-29 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_22865 bcf8ff19091c6d779dffbc6adaa7c5e6 207 Gene3D G3DSA:3.30.420.10 2 202 1.1E-40 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_22865 bcf8ff19091c6d779dffbc6adaa7c5e6 207 Pfam PF00929 Exonuclease 8 174 4.4E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III UP17_22865 bcf8ff19091c6d779dffbc6adaa7c5e6 207 SUPERFAMILY SSF53098 6 179 4.56E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_06195 fd60d73bdf21c1dd22c2a1a06ef4258e 174 Gene3D G3DSA:3.40.50.880 2 174 2.4E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_06195 fd60d73bdf21c1dd22c2a1a06ef4258e 174 Pfam PF01965 DJ-1/PfpI family 6 168 5.8E-44 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 UP17_06195 fd60d73bdf21c1dd22c2a1a06ef4258e 174 SUPERFAMILY SSF52317 5 171 4.03E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_06195 fd60d73bdf21c1dd22c2a1a06ef4258e 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 7 171 2.5E-46 T 11-10-2018 IPR006286 Deglycase PfpI UP17_16410 a720acda0f15c1106f9430d3e6bc77d3 233 Pfam PF12840 Helix-turn-helix domain 7 61 7.8E-8 T 11-10-2018 UP17_16410 a720acda0f15c1106f9430d3e6bc77d3 233 Gene3D G3DSA:1.10.10.10 2 81 4.8E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_16410 a720acda0f15c1106f9430d3e6bc77d3 233 SMART SM00418 6 88 0.0045 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_16410 a720acda0f15c1106f9430d3e6bc77d3 233 Gene3D G3DSA:3.30.1380.20 82 232 9.0E-7 T 11-10-2018 UP17_16410 a720acda0f15c1106f9430d3e6bc77d3 233 SUPERFAMILY SSF46785 1 204 7.34E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_15815 18dbe5eb8413746045c01149c1464c13 141 SUPERFAMILY SSF82784 1 138 1.02E-29 T 11-10-2018 IPR036102 OsmC/Ohr superfamily UP17_15815 18dbe5eb8413746045c01149c1464c13 141 Gene3D G3DSA:3.30.300.20 47 139 1.7E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_15815 18dbe5eb8413746045c01149c1464c13 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 137 2.4E-44 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 UP17_15815 18dbe5eb8413746045c01149c1464c13 141 Pfam PF02566 OsmC-like protein 44 136 7.9E-15 T 11-10-2018 IPR003718 OsmC/Ohr family UP17_15815 18dbe5eb8413746045c01149c1464c13 141 Gene3D G3DSA:2.20.25.10 3 43 1.4E-9 T 11-10-2018 UP17_10240 29a36ddc4a70b4cf0b2834c63019da4b 698 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 40 497 3.9E-97 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10240 29a36ddc4a70b4cf0b2834c63019da4b 698 Pfam PF01642 Methylmalonyl-CoA mutase 40 529 3.1E-154 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10240 29a36ddc4a70b4cf0b2834c63019da4b 698 Gene3D G3DSA:3.40.50.280 558 697 3.3E-40 T 11-10-2018 UP17_10240 29a36ddc4a70b4cf0b2834c63019da4b 698 Gene3D G3DSA:3.20.20.240 3 546 4.6E-162 T 11-10-2018 UP17_10240 29a36ddc4a70b4cf0b2834c63019da4b 698 SUPERFAMILY SSF51703 8 594 2.75E-147 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 UP17_10240 29a36ddc4a70b4cf0b2834c63019da4b 698 SUPERFAMILY SSF52242 533 695 2.62E-38 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 UP17_20635 e4a7c22d037a64fd44ca46982fa0bcda 300 SUPERFAMILY SSF161098 93 299 1.06E-34 T 11-10-2018 IPR035906 MetI-like superfamily UP17_20635 e4a7c22d037a64fd44ca46982fa0bcda 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 75 1.2E-12 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain UP17_20635 e4a7c22d037a64fd44ca46982fa0bcda 300 Gene3D G3DSA:1.10.3720.10 86 300 1.4E-28 T 11-10-2018 IPR035906 MetI-like superfamily UP17_20635 e4a7c22d037a64fd44ca46982fa0bcda 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 300 2.8E-33 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_24105 d2c20ff28e69d86dbf56236d2c32d9cf 172 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 21 161 5.9E-37 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24105 d2c20ff28e69d86dbf56236d2c32d9cf 172 Gene3D G3DSA:1.20.120.1200 8 165 1.1E-41 T 11-10-2018 UP17_25015 8ebbb2950da69a4f08db57070b5cf2e0 238 SUPERFAMILY SSF53335 1 237 1.64E-50 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_25015 8ebbb2950da69a4f08db57070b5cf2e0 238 PIRSF PIRSF003078 1 220 7.2E-60 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UP17_25015 8ebbb2950da69a4f08db57070b5cf2e0 238 Pfam PF02527 rRNA small subunit methyltransferase G 21 204 2.1E-56 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UP17_25015 8ebbb2950da69a4f08db57070b5cf2e0 238 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 217 2.4E-50 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UP17_25015 8ebbb2950da69a4f08db57070b5cf2e0 238 Gene3D G3DSA:3.40.50.150 1 238 1.6E-89 T 11-10-2018 UP17_25015 8ebbb2950da69a4f08db57070b5cf2e0 238 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.132 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 UP17_15090 1ed152f706539f80e87b16e12c35e631 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.5E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_15090 1ed152f706539f80e87b16e12c35e631 66 Gene3D G3DSA:2.40.50.140 1 66 1.2E-30 T 11-10-2018 UP17_15090 1ed152f706539f80e87b16e12c35e631 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site UP17_15090 1ed152f706539f80e87b16e12c35e631 66 SMART SM00357 3 66 1.3E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_15090 1ed152f706539f80e87b16e12c35e631 66 PIRSF PIRSF002599 1 66 1.0E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 UP17_15090 1ed152f706539f80e87b16e12c35e631 66 SUPERFAMILY SSF50249 1 64 4.93E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_15090 1ed152f706539f80e87b16e12c35e631 66 PRINTS PR00050 Cold shock protein signature 39 57 1.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_15090 1ed152f706539f80e87b16e12c35e631 66 PRINTS PR00050 Cold shock protein signature 24 33 1.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_15090 1ed152f706539f80e87b16e12c35e631 66 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_03040 9de48d92e84be2a4f08c5215b0e106c2 324 Pfam PF13800 Sigma factor regulator N-terminal 16 103 2.2E-8 T 11-10-2018 IPR029101 Sigma factor regulator, N-terminal UP17_03040 9de48d92e84be2a4f08c5215b0e106c2 324 Pfam PF13791 Sigma factor regulator C-terminal 166 318 7.8E-23 T 11-10-2018 IPR025672 Sigma factor regulator C-terminal domain UP17_19750 935c4ea843c2f9e6a2af40e3d9d65361 280 SUPERFAMILY SSF53474 3 274 1.53E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_19750 935c4ea843c2f9e6a2af40e3d9d65361 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 224 238 2.6E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19750 935c4ea843c2f9e6a2af40e3d9d65361 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 2.6E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19750 935c4ea843c2f9e6a2af40e3d9d65361 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 2.6E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19750 935c4ea843c2f9e6a2af40e3d9d65361 280 Pfam PF00561 alpha/beta hydrolase fold 24 265 2.9E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19750 935c4ea843c2f9e6a2af40e3d9d65361 280 Gene3D G3DSA:3.40.50.1820 1 279 2.3E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_21815 412333012eb04be3f5c3356b12f00ea3 194 Gene3D G3DSA:1.10.1760.20 1 180 8.0E-52 T 11-10-2018 UP17_21815 412333012eb04be3f5c3356b12f00ea3 194 PIRSF PIRSF016661 1 182 6.8E-53 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 UP17_21815 412333012eb04be3f5c3356b12f00ea3 194 Pfam PF02632 BioY family 27 173 6.6E-39 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 UP17_23140 a590970f8118a7ec1532b3a832bda3d7 433 Pfam PF01458 Uncharacterized protein family (UPF0051) 183 407 2.9E-65 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 UP17_23140 a590970f8118a7ec1532b3a832bda3d7 433 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 149 424 1.1E-77 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 UP17_23140 a590970f8118a7ec1532b3a832bda3d7 433 Pfam PF06560 Glucose-6-phosphate isomerase (GPI) 170 247 1.2E-4 T 11-10-2018 IPR010551 Glucose-6-phosphate isomerase, prokaryote GO:0004347|GO:0005737|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385 UP17_23140 a590970f8118a7ec1532b3a832bda3d7 433 SUPERFAMILY SSF101960 16 432 4.32E-121 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily UP17_06285 5dd3315f379daadb5097f99c9948be6c 328 Gene3D G3DSA:3.30.360.10 134 327 1.2E-61 T 11-10-2018 UP17_06285 5dd3315f379daadb5097f99c9948be6c 328 Gene3D G3DSA:3.40.50.720 1 133 2.1E-38 T 11-10-2018 UP17_06285 5dd3315f379daadb5097f99c9948be6c 328 SUPERFAMILY SSF51735 2 152 1.06E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_06285 5dd3315f379daadb5097f99c9948be6c 328 SUPERFAMILY SSF55347 128 291 1.8E-24 T 11-10-2018 UP17_06285 5dd3315f379daadb5097f99c9948be6c 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 5.5E-28 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 UP17_21385 8aa3f6f6c7997a9e09df32defda2c03c 59 Gene3D G3DSA:3.10.310.10 15 57 4.2E-15 T 11-10-2018 UP17_21385 8aa3f6f6c7997a9e09df32defda2c03c 59 Pfam PF02567 Phenazine biosynthesis-like protein 15 57 7.6E-13 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 UP17_21385 8aa3f6f6c7997a9e09df32defda2c03c 59 SUPERFAMILY SSF54506 15 56 1.92E-13 T 11-10-2018 UP17_23295 db1157807db52eb2cdad0a1f55b328e2 316 Gene3D G3DSA:1.10.3470.10 1 313 3.7E-65 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_23295 db1157807db52eb2cdad0a1f55b328e2 316 Pfam PF01032 FecCD transport family 10 311 1.9E-68 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 UP17_23295 db1157807db52eb2cdad0a1f55b328e2 316 SUPERFAMILY SSF81345 3 312 7.72E-70 T 11-10-2018 IPR037294 ABC transporter, BtuC-like UP17_18785 04e4b43671b7e2cd174aabcf901f4c49 448 Pfam PF05598 Transposase domain (DUF772) 52 127 3.5E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_18785 04e4b43671b7e2cd174aabcf901f4c49 448 Pfam PF13751 Transposase DDE domain 324 437 1.5E-26 T 11-10-2018 IPR025668 Transposase DDE domain UP17_07795 f840baba27e363717078fa02777441e1 205 Pfam PF03448 MgtE intracellular N domain 146 202 1.1E-7 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain UP17_07795 f840baba27e363717078fa02777441e1 205 Gene3D G3DSA:1.25.60.10 80 201 1.9E-5 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily UP17_07795 f840baba27e363717078fa02777441e1 205 SUPERFAMILY SSF158791 145 200 9.02E-9 T 11-10-2018 UP17_14410 8a08eb1f1986bec3de8cb1fef9cceefe 145 Gene3D G3DSA:3.40.30.10 25 143 2.6E-51 T 11-10-2018 UP17_14410 8a08eb1f1986bec3de8cb1fef9cceefe 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 143 3.9E-64 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family UP17_14410 8a08eb1f1986bec3de8cb1fef9cceefe 145 Pfam PF06491 Disulphide isomerase 8 142 5.9E-60 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family UP17_09915 1c7fd0bc3bc6ffe787e63ee6cf8952ed 331 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 296 1.1E-90 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B UP17_09915 1c7fd0bc3bc6ffe787e63ee6cf8952ed 331 SMART SM00797 24 313 6.6E-127 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B UP17_09915 1c7fd0bc3bc6ffe787e63ee6cf8952ed 331 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 319 1.5E-94 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B UP17_09915 1c7fd0bc3bc6ffe787e63ee6cf8952ed 331 SUPERFAMILY SSF50891 196 303 5.69E-10 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_09915 1c7fd0bc3bc6ffe787e63ee6cf8952ed 331 Gene3D G3DSA:2.40.100.10 186 324 1.5E-48 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_07645 60e5eeab0a04dc85070383bd5f016288 76 Hamap MF_00088 UPF0109 protein . 1 75 21.67 T 11-10-2018 IPR020627 Uncharacterised protein family UPF0109 UP17_07645 60e5eeab0a04dc85070383bd5f016288 76 SUPERFAMILY SSF54814 6 59 2.81E-7 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 UP17_07645 60e5eeab0a04dc85070383bd5f016288 76 Gene3D G3DSA:3.30.300.20 5 62 1.1E-5 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_07645 60e5eeab0a04dc85070383bd5f016288 76 Pfam PF13083 KH domain 2 74 3.0E-23 T 11-10-2018 UP17_21070 36bc246352b3ca49038a5b4b32182b0c 146 Gene3D G3DSA:3.30.530.20 3 143 1.5E-23 T 11-10-2018 IPR023393 START-like domain superfamily UP17_21070 36bc246352b3ca49038a5b4b32182b0c 146 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 141 4.9E-13 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase UP17_21070 36bc246352b3ca49038a5b4b32182b0c 146 SUPERFAMILY SSF55961 5 142 1.1E-23 T 11-10-2018 UP17_25735 d3d775689c584ed8a260e1f212f22a11 551 SUPERFAMILY SSF47413 499 549 9.38E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_25735 d3d775689c584ed8a260e1f212f22a11 551 Gene3D G3DSA:1.10.260.40 490 551 1.3E-6 T 11-10-2018 UP17_25735 d3d775689c584ed8a260e1f212f22a11 551 Pfam PF01381 Helix-turn-helix 502 545 5.2E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_21470 fb13281c54148b0407337f81ac8bac26 261 SUPERFAMILY SSF54506 2 261 1.86E-76 T 11-10-2018 UP17_21470 fb13281c54148b0407337f81ac8bac26 261 Gene3D G3DSA:3.10.310.10 116 249 1.1E-84 T 11-10-2018 UP17_21470 fb13281c54148b0407337f81ac8bac26 261 Gene3D G3DSA:3.10.310.10 5 257 1.1E-84 T 11-10-2018 UP17_21470 fb13281c54148b0407337f81ac8bac26 261 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 261 6.4E-35 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 UP17_21470 fb13281c54148b0407337f81ac8bac26 261 Pfam PF02567 Phenazine biosynthesis-like protein 7 257 7.7E-62 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 UP17_21470 fb13281c54148b0407337f81ac8bac26 261 PIRSF PIRSF016184 1 261 1.2E-50 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 UP17_14600 300d9804b918798a2a204c4d41592cb9 490 Gene3D G3DSA:3.40.605.10 7 474 1.9E-184 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_14600 300d9804b918798a2a204c4d41592cb9 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 UP17_14600 300d9804b918798a2a204c4d41592cb9 490 Pfam PF00171 Aldehyde dehydrogenase family 11 476 8.8E-179 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_14600 300d9804b918798a2a204c4d41592cb9 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 UP17_14600 300d9804b918798a2a204c4d41592cb9 490 PIRSF PIRSF036492 30 488 3.1E-85 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 UP17_14600 300d9804b918798a2a204c4d41592cb9 490 SUPERFAMILY SSF53720 3 477 4.45E-172 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_14600 300d9804b918798a2a204c4d41592cb9 490 Gene3D G3DSA:3.40.309.10 253 446 1.9E-184 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 282 38.447 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 SUPERFAMILY SSF52096 29 283 2.27E-78 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 Pfam PF01039 Carboxyl transferase domain 64 243 8.5E-20 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 20 282 3.0E-123 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 UP17_18205 fa1a47b4cd8eabe95d149b6c7e7eb6f6 287 Gene3D G3DSA:3.90.226.10 29 282 4.6E-86 T 11-10-2018 UP17_25290 9895551c77b81171f9ed2b2d958734e3 195 SMART SM00894 158 194 2.3E-11 T 11-10-2018 IPR008613 Excalibur calcium-binding domain UP17_25290 9895551c77b81171f9ed2b2d958734e3 195 Pfam PF05901 Excalibur calcium-binding domain 159 194 2.9E-10 T 11-10-2018 IPR008613 Excalibur calcium-binding domain UP17_13410 dad42d789e510bb981b580829ea80c34 329 Gene3D G3DSA:3.40.50.40 200 329 8.4E-38 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 1.5E-14 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.5E-14 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 1.5E-14 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 Gene3D G3DSA:3.40.50.1170 2 197 2.2E-68 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 SUPERFAMILY SSF53774 2 328 1.24E-97 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 PIRSF PIRSF001220 1 327 1.4E-95 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 Pfam PF00710 Asparaginase, N-terminal 3 185 5.2E-65 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 SMART SM00870 3 316 1.6E-114 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 2 328 1.2E-129 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 UP17_13410 dad42d789e510bb981b580829ea80c34 329 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 UP17_13410 dad42d789e510bb981b580829ea80c34 329 PIRSF PIRSF500176 1 325 5.4E-102 T 11-10-2018 UP17_10775 81f1a40ae5162cf16c1f2ca9fbccc928 426 Gene3D G3DSA:3.30.565.10 268 420 1.4E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_10775 81f1a40ae5162cf16c1f2ca9fbccc928 426 Pfam PF14501 GHKL domain 319 417 9.7E-16 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain UP17_10775 81f1a40ae5162cf16c1f2ca9fbccc928 426 SUPERFAMILY SSF55874 279 420 3.73E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_10775 81f1a40ae5162cf16c1f2ca9fbccc928 426 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 218 273 4.9E-7 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain UP17_10775 81f1a40ae5162cf16c1f2ca9fbccc928 426 SUPERFAMILY SSF55890 221 292 8.89E-7 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 UP17_16930 919513543ca06943a1d7e95028b43a5f 212 Pfam PF13649 Methyltransferase domain 49 139 2.9E-15 T 11-10-2018 UP17_16930 919513543ca06943a1d7e95028b43a5f 212 SUPERFAMILY SSF53335 7 196 1.36E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_16930 919513543ca06943a1d7e95028b43a5f 212 Hamap MF_02100 Uncharacterized methyltransferase . 2 212 43.735 T 11-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 UP17_16930 919513543ca06943a1d7e95028b43a5f 212 Gene3D G3DSA:3.40.50.150 24 212 5.3E-49 T 11-10-2018 UP17_07140 bfd4e406e57298aedfe82be1dd659b0b 300 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 3 282 1.5E-115 T 11-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG UP17_07140 bfd4e406e57298aedfe82be1dd659b0b 300 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 26 280 4.8E-59 T 11-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related UP17_03765 8c339650d6794dad41b4e8074aa1fd73 265 Gene3D G3DSA:1.10.10.10 217 265 7.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03765 8c339650d6794dad41b4e8074aa1fd73 265 Gene3D G3DSA:1.10.10.10 155 216 2.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_03765 8c339650d6794dad41b4e8074aa1fd73 265 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 16.991 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 UP17_03765 8c339650d6794dad41b4e8074aa1fd73 265 Gene3D G3DSA:1.10.10.2800 1 107 1.5E-38 T 11-10-2018 UP17_03765 8c339650d6794dad41b4e8074aa1fd73 265 Pfam PF02631 RecX family 84 204 6.7E-27 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 UP17_03765 8c339650d6794dad41b4e8074aa1fd73 265 Pfam PF02631 RecX family 208 261 1.5E-4 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 UP17_03765 8c339650d6794dad41b4e8074aa1fd73 265 Gene3D G3DSA:1.10.10.10 108 152 3.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_10860 df40b033540324fce8d69d151a321f5f 369 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 6 364 1.8E-161 T 11-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 UP17_10860 df40b033540324fce8d69d151a321f5f 369 SUPERFAMILY SSF53383 10 345 2.13E-33 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_10860 df40b033540324fce8d69d151a321f5f 369 Pfam PF03841 L-seryl-tRNA selenium transferase 58 278 1.0E-10 T 11-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 UP17_10860 df40b033540324fce8d69d151a321f5f 369 Gene3D G3DSA:3.40.640.10 24 278 1.5E-47 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_12170 4c5de740ff875278ccff55e9360ab932 115 Gene3D G3DSA:1.10.10.10 1 114 5.5E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12170 4c5de740ff875278ccff55e9360ab932 115 Pfam PF03551 Transcriptional regulator PadR-like family 19 85 7.4E-19 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_12170 4c5de740ff875278ccff55e9360ab932 115 SUPERFAMILY SSF46785 9 102 2.29E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_14595 a1b89b288fa8a7979c1dba88e1502b1c 472 PIRSF PIRSF006603 18 470 5.7E-55 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_14595 a1b89b288fa8a7979c1dba88e1502b1c 472 Pfam PF01554 MatE 44 196 2.5E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_14595 a1b89b288fa8a7979c1dba88e1502b1c 472 Pfam PF01554 MatE 268 424 5.3E-12 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 UP17_12220 080e6f864b2c4c66f3e28be024dc5bba 405 SUPERFAMILY SSF51905 2 283 3.24E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_12220 080e6f864b2c4c66f3e28be024dc5bba 405 Pfam PF01266 FAD dependent oxidoreductase 3 390 1.8E-63 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UP17_16855 ac8fdb8388969e50e00aa65617f8fb7d 190 Gene3D G3DSA:1.10.3210.10 1 186 1.8E-56 T 11-10-2018 UP17_16855 ac8fdb8388969e50e00aa65617f8fb7d 190 SMART SM00471 14 141 5.5E-7 T 11-10-2018 IPR003607 HD/PDEase domain UP17_16855 ac8fdb8388969e50e00aa65617f8fb7d 190 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 180 6.8E-65 T 11-10-2018 IPR005249 Conserved hypothetical protein CHP00488 UP17_16855 ac8fdb8388969e50e00aa65617f8fb7d 190 Pfam PF01966 HD domain 18 130 2.1E-15 T 11-10-2018 IPR006674 HD domain UP17_16855 ac8fdb8388969e50e00aa65617f8fb7d 190 SUPERFAMILY SSF109604 6 185 2.2E-33 T 11-10-2018 UP17_03260 e2b69372bc0f3a571867edf2259b7e82 456 Gene3D G3DSA:1.20.1250.20 12 438 2.9E-89 T 11-10-2018 UP17_03260 e2b69372bc0f3a571867edf2259b7e82 456 SUPERFAMILY SSF103473 8 432 3.79E-77 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_03260 e2b69372bc0f3a571867edf2259b7e82 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_03260 e2b69372bc0f3a571867edf2259b7e82 456 Pfam PF00083 Sugar (and other) transporter 23 434 8.3E-56 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 UP17_18865 56d79cd2536252982c312fecfd4fab83 234 Pfam PF04239 Protein of unknown function (DUF421) 96 208 1.0E-24 T 11-10-2018 IPR007353 Protein of unknown function DUF421 UP17_18865 56d79cd2536252982c312fecfd4fab83 234 Gene3D G3DSA:3.30.240.20 176 234 8.8E-11 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_18865 56d79cd2536252982c312fecfd4fab83 234 Gene3D G3DSA:3.30.240.20 89 162 4.0E-18 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_18790 64071e61efd8f0b8f0e992ba197fe505 109 SUPERFAMILY SSF46767 2 86 9.29E-21 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 UP17_18790 64071e61efd8f0b8f0e992ba197fe505 109 Gene3D G3DSA:1.10.10.10 1 106 8.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18790 64071e61efd8f0b8f0e992ba197fe505 109 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 84 6.3E-25 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 UP17_15005 247fd1a83bf3f023074405af4e832555 154 Gene3D G3DSA:1.10.10.10 1 141 3.8E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_15005 247fd1a83bf3f023074405af4e832555 154 Pfam PF02082 Transcriptional regulator 1 82 1.3E-25 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_15005 247fd1a83bf3f023074405af4e832555 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 1.2E-38 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type UP17_15005 247fd1a83bf3f023074405af4e832555 154 SUPERFAMILY SSF46785 2 133 1.7E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_15005 247fd1a83bf3f023074405af4e832555 154 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site UP17_11060 73ba78070f5195f83ff775140df6c6e9 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 361 1.9E-57 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_11060 73ba78070f5195f83ff775140df6c6e9 363 Pfam PF03845 Spore germination protein 11 325 7.3E-85 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 Pfam PF01019 Gamma-glutamyltranspeptidase 48 513 3.7E-114 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 Gene3D G3DSA:1.10.246.230 234 336 2.9E-25 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 SUPERFAMILY SSF56235 22 514 3.01E-132 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 Gene3D G3DSA:3.60.20.40 343 516 1.3E-55 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 218 234 3.4E-53 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 247 266 3.4E-53 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 55 80 3.4E-53 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 109 127 3.4E-53 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 417 434 3.4E-53 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 343 361 3.4E-53 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 393 408 3.4E-53 T 11-10-2018 UP17_25605 157ada5da7a95bfc995d6e5f895ac25d 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 127 146 3.4E-53 T 11-10-2018 UP17_20430 f30ae19ce7ed9ee949971fbe966734be 134 Pfam PF07485 Domain of Unknown Function (DUF1259) 10 124 1.5E-27 T 11-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO UP17_15650 81e85cf3ad6caee448bfb26f5a9306a0 197 Pfam PF07670 Nucleoside recognition 43 150 5.2E-13 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 UP17_02590 a79dab8a3e6b90e34536bc204e54d6fc 477 Gene3D G3DSA:3.40.605.10 30 461 5.6E-152 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 UP17_02590 a79dab8a3e6b90e34536bc204e54d6fc 477 Pfam PF00171 Aldehyde dehydrogenase family 21 472 3.9E-154 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 UP17_02590 a79dab8a3e6b90e34536bc204e54d6fc 477 SUPERFAMILY SSF53720 4 475 2.75E-148 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 UP17_02590 a79dab8a3e6b90e34536bc204e54d6fc 477 Gene3D G3DSA:3.40.309.10 254 443 5.6E-152 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 UP17_25635 5140c0cc2a02c9dd2ac9c4dee7deaf12 104 Gene3D G3DSA:3.30.450.20 7 98 3.1E-8 T 11-10-2018 UP17_25635 5140c0cc2a02c9dd2ac9c4dee7deaf12 104 SMART SM00091 19 84 0.0042 T 11-10-2018 IPR000014 PAS domain UP17_25635 5140c0cc2a02c9dd2ac9c4dee7deaf12 104 Pfam PF00989 PAS fold 20 73 8.6E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 UP17_25635 5140c0cc2a02c9dd2ac9c4dee7deaf12 104 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 19 60 4.8E-6 T 11-10-2018 IPR000014 PAS domain UP17_25635 5140c0cc2a02c9dd2ac9c4dee7deaf12 104 SUPERFAMILY SSF55785 12 66 1.5E-8 T 11-10-2018 IPR035965 PAS domain superfamily UP17_13455 933c6604a07900ddd9c8c189b3647b20 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 9.0E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_13455 933c6604a07900ddd9c8c189b3647b20 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 157 279 2.0E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_13455 933c6604a07900ddd9c8c189b3647b20 325 Gene3D G3DSA:3.10.180.10 65 223 1.2E-117 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_13455 933c6604a07900ddd9c8c189b3647b20 325 SUPERFAMILY SSF54593 1 305 3.84E-51 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_13455 933c6604a07900ddd9c8c189b3647b20 325 Gene3D G3DSA:3.10.180.10 4 318 1.2E-117 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_14680 2aa020e8e949524db5255ce1d5e2d267 193 SUPERFAMILY SSF46689 4 62 4.46E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_14680 2aa020e8e949524db5255ce1d5e2d267 193 Gene3D G3DSA:1.10.10.60 2 50 6.2E-14 T 11-10-2018 UP17_14680 2aa020e8e949524db5255ce1d5e2d267 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 2.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_14680 2aa020e8e949524db5255ce1d5e2d267 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 2.3E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_14680 2aa020e8e949524db5255ce1d5e2d267 193 Gene3D G3DSA:1.10.357.10 51 190 1.1E-17 T 11-10-2018 UP17_14680 2aa020e8e949524db5255ce1d5e2d267 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 51 1.5E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_11030 7176b5fb030f8c828f867c0c2fc2a7d6 503 Pfam PF03239 Iron permease FTR1 family 231 353 4.1E-15 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 UP17_04180 8bfcfb5b07e5bb17a0f7c12827f7b703 390 SUPERFAMILY SSF53756 34 389 7.63E-38 T 11-10-2018 UP17_04180 8bfcfb5b07e5bb17a0f7c12827f7b703 390 Pfam PF00534 Glycosyl transferases group 1 211 358 5.7E-17 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_04180 8bfcfb5b07e5bb17a0f7c12827f7b703 390 Gene3D G3DSA:3.40.50.2000 198 375 1.1E-27 T 11-10-2018 UP17_04180 8bfcfb5b07e5bb17a0f7c12827f7b703 390 Gene3D G3DSA:3.40.50.2000 37 383 1.1E-27 T 11-10-2018 UP17_22100 258150332f01c394680bcffbe7304f18 262 Pfam PF00326 Prolyl oligopeptidase family 70 260 8.4E-20 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 UP17_22100 258150332f01c394680bcffbe7304f18 262 SUPERFAMILY SSF53474 13 259 1.25E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_22100 258150332f01c394680bcffbe7304f18 262 Gene3D G3DSA:3.40.50.1820 22 262 4.2E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_22635 b0b84399b7e676f20a661674ea3752c2 103 SUPERFAMILY SSF46785 4 100 6.42E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_22635 b0b84399b7e676f20a661674ea3752c2 103 SMART SM00418 5 97 0.0031 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_22635 b0b84399b7e676f20a661674ea3752c2 103 Gene3D G3DSA:1.10.10.10 2 103 1.7E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18995 76ef0500d97032f5d2a7582bf82e83a0 145 Pfam PF00583 Acetyltransferase (GNAT) family 18 133 9.0E-19 T 11-10-2018 IPR000182 GNAT domain UP17_18995 76ef0500d97032f5d2a7582bf82e83a0 145 Gene3D G3DSA:3.40.630.30 2 139 1.4E-37 T 11-10-2018 UP17_18995 76ef0500d97032f5d2a7582bf82e83a0 145 SUPERFAMILY SSF55729 1 142 2.19E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PIRSF PIRSF006060 10 41 250.0 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PIRSF PIRSF006060 328 435 2.2 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PIRSF PIRSF006060 51 261 4.0E-9 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PRINTS PR00175 Sodium/alanine symporter signature 345 367 1.8E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PRINTS PR00175 Sodium/alanine symporter signature 300 318 1.8E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PRINTS PR00175 Sodium/alanine symporter signature 208 227 1.8E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PRINTS PR00175 Sodium/alanine symporter signature 180 198 1.8E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PRINTS PR00175 Sodium/alanine symporter signature 90 112 1.8E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 PRINTS PR00175 Sodium/alanine symporter signature 405 425 1.8E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 436 8.9E-155 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_10365 dd96c14d9e71405d785cdd2fd66bad38 475 Pfam PF01235 Sodium:alanine symporter family 54 448 1.9E-162 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_07240 53a167b97c5dea6448511c30929eeb11 251 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 251 1.6E-40 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 UP17_07240 53a167b97c5dea6448511c30929eeb11 251 Gene3D G3DSA:3.90.226.10 1 251 3.3E-64 T 11-10-2018 UP17_07240 53a167b97c5dea6448511c30929eeb11 251 SUPERFAMILY SSF52096 8 251 2.63E-62 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_17540 cf11a3da8c2138fd4718b4e86daa3b8e 249 SUPERFAMILY SSF51261 106 244 4.5E-17 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_17540 cf11a3da8c2138fd4718b4e86daa3b8e 249 Gene3D G3DSA:2.70.70.10 119 247 2.1E-20 T 11-10-2018 IPR011055 Duplicated hybrid motif UP17_17540 cf11a3da8c2138fd4718b4e86daa3b8e 249 Pfam PF01551 Peptidase family M23 150 242 4.2E-18 T 11-10-2018 IPR016047 Peptidase M23 UP17_08885 4ccd92328f9fb3ee1ddb58659edd1d07 132 PIRSF PIRSF030066 1 127 5.5E-34 T 11-10-2018 IPR016944 Uncharacterised conserved protein UCP030066 UP17_08885 4ccd92328f9fb3ee1ddb58659edd1d07 132 Pfam PF13564 DoxX-like family 10 107 2.5E-21 T 11-10-2018 IPR032808 DoxX family UP17_08595 237f38e8bb22702b3e849264f4d7625e 102 SUPERFAMILY SSF56973 50 102 4.45E-6 T 11-10-2018 UP17_08595 237f38e8bb22702b3e849264f4d7625e 102 Pfam PF03318 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 44 102 4.0E-8 T 11-10-2018 IPR004991 Aerolysin-like toxin UP17_08595 237f38e8bb22702b3e849264f4d7625e 102 Gene3D G3DSA:2.170.15.10 47 102 3.4E-11 T 11-10-2018 UP17_01435 a9ae6b38a09d76fc9631f8293d81cd9b 159 Hamap MF_00745 Protein SprT-like. 4 150 38.412 T 11-10-2018 IPR023524 Uncharacterised protein family SprT-like UP17_01435 a9ae6b38a09d76fc9631f8293d81cd9b 159 SMART SM00731 4 150 2.7E-51 T 11-10-2018 IPR006640 SprT-like UP17_01435 a9ae6b38a09d76fc9631f8293d81cd9b 159 Pfam PF10263 SprT-like family 9 97 3.3E-12 T 11-10-2018 IPR006640 SprT-like UP17_04925 39454cd0ed3b44b4142b9346a2d632fa 101 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 100 3.2E-34 T 11-10-2018 IPR009799 EthD domain UP17_04925 39454cd0ed3b44b4142b9346a2d632fa 101 Pfam PF07110 EthD domain 13 88 5.6E-12 T 11-10-2018 IPR009799 EthD domain UP17_04925 39454cd0ed3b44b4142b9346a2d632fa 101 Gene3D G3DSA:3.30.70.100 1 101 5.3E-41 T 11-10-2018 UP17_04925 39454cd0ed3b44b4142b9346a2d632fa 101 SUPERFAMILY SSF54909 1 100 1.07E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_12195 375269bdacc1f860c7d4142cb8824007 247 ProDom PD315856 ORF119 CPE0798 YOXB 12 244 4.0E-43 T 11-10-2018 IPR020530 Uncharacterised protein family, YoxB UP17_12195 375269bdacc1f860c7d4142cb8824007 247 SUPERFAMILY SSF52141 32 239 3.4E-9 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 UP17_01385 8fd13ad78d716e7861ab9c1f5a25db4b 116 Gene3D G3DSA:2.30.30.110 1 116 1.9E-52 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor UP17_01385 8fd13ad78d716e7861ab9c1f5a25db4b 116 PIRSF PIRSF033490 1 113 8.7E-38 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 UP17_01385 8fd13ad78d716e7861ab9c1f5a25db4b 116 SUPERFAMILY SSF50118 2 113 2.94E-41 T 11-10-2018 UP17_01385 8fd13ad78d716e7861ab9c1f5a25db4b 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 7.9E-33 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 UP17_11855 c1298b72065390d0a7810e2c10d2b039 459 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_11855 c1298b72065390d0a7810e2c10d2b039 459 Gene3D G3DSA:1.20.1740.10 6 457 5.4E-63 T 11-10-2018 UP17_11855 c1298b72065390d0a7810e2c10d2b039 459 PIRSF PIRSF006060 1 458 2.9E-73 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_11855 c1298b72065390d0a7810e2c10d2b039 459 Pfam PF00324 Amino acid permease 14 446 1.1E-113 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_25335 b00580d537d3baf56bfcd6781a055fb1 375 Pfam PF16289 Domain of unknown function (DUF4935) 1 193 4.4E-11 T 11-10-2018 IPR032557 Protein of unknown function DUF4935 UP17_20135 bce310a06b8bb19d5c87868f8d7a9e6d 305 SUPERFAMILY SSF52172 5 132 2.99E-20 T 11-10-2018 IPR011006 CheY-like superfamily UP17_20135 bce310a06b8bb19d5c87868f8d7a9e6d 305 Pfam PF00072 Response regulator receiver domain 4 110 2.2E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_20135 bce310a06b8bb19d5c87868f8d7a9e6d 305 Pfam PF08664 YcbB domain 158 296 6.5E-44 T 11-10-2018 IPR013972 YcbB domain UP17_20135 bce310a06b8bb19d5c87868f8d7a9e6d 305 Gene3D G3DSA:3.40.50.2300 1 131 1.5E-19 T 11-10-2018 UP17_20135 bce310a06b8bb19d5c87868f8d7a9e6d 305 SMART SM00448 1 114 1.2E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_19420 296d265c7c7e137803ade89301c73930 210 PIRSF PIRSF006324 1 208 5.1E-58 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_19420 296d265c7c7e137803ade89301c73930 210 Pfam PF01810 LysE type translocator 13 206 1.3E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_10305 dcd949f4044e88fcd411cc1a94675fd3 284 Gene3D G3DSA:1.10.3720.10 2 274 3.3E-31 T 11-10-2018 IPR035906 MetI-like superfamily UP17_10305 dcd949f4044e88fcd411cc1a94675fd3 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 280 1.6E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_10305 dcd949f4044e88fcd411cc1a94675fd3 284 SUPERFAMILY SSF161098 7 278 3.27E-37 T 11-10-2018 IPR035906 MetI-like superfamily UP17_02300 c3ac0a8de71ea9c773c0d628fcec71b5 272 SUPERFAMILY SSF161098 2 272 1.03E-69 T 11-10-2018 IPR035906 MetI-like superfamily UP17_02300 c3ac0a8de71ea9c773c0d628fcec71b5 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 265 1.5E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_02300 c3ac0a8de71ea9c773c0d628fcec71b5 272 Gene3D G3DSA:1.10.3720.10 1 260 1.4E-61 T 11-10-2018 IPR035906 MetI-like superfamily UP17_12725 1439ca70a23c4c180a6a6de1882fd3d5 301 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 265 2.6E-117 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 UP17_12725 1439ca70a23c4c180a6a6de1882fd3d5 301 SUPERFAMILY SSF53448 1 275 4.8E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_12725 1439ca70a23c4c180a6a6de1882fd3d5 301 Pfam PF00483 Nucleotidyl transferase 5 266 9.4E-34 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 UP17_12725 1439ca70a23c4c180a6a6de1882fd3d5 301 Gene3D G3DSA:3.90.550.10 1 294 2.8E-89 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_09190 452d98a57e921792e81685416b6ff713 150 SUPERFAMILY SSF103481 45 146 2.35E-5 T 11-10-2018 UP17_09190 452d98a57e921792e81685416b6ff713 150 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 139 2.3E-28 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ UP17_10390 7b2d4f1c5a5f196919020d2b0ff77886 247 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 25 231 2.5E-85 T 11-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UP17_10390 7b2d4f1c5a5f196919020d2b0ff77886 247 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 26 231 1.0E-52 T 11-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 UP17_10390 7b2d4f1c5a5f196919020d2b0ff77886 247 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 25 240 29.118 T 11-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UP17_10390 7b2d4f1c5a5f196919020d2b0ff77886 247 Gene3D G3DSA:1.10.1760.20 25 234 2.1E-54 T 11-10-2018 UP17_22340 9b3794aba602eef0aaff6be0421591fc 225 Pfam PF02308 MgtC family 7 135 3.0E-33 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 UP17_22340 9b3794aba602eef0aaff6be0421591fc 225 PRINTS PR01837 MgtC/SapB protein signature 93 117 9.3E-42 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 UP17_22340 9b3794aba602eef0aaff6be0421591fc 225 PRINTS PR01837 MgtC/SapB protein signature 10 29 9.3E-42 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 UP17_22340 9b3794aba602eef0aaff6be0421591fc 225 PRINTS PR01837 MgtC/SapB protein signature 29 47 9.3E-42 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 UP17_22340 9b3794aba602eef0aaff6be0421591fc 225 PRINTS PR01837 MgtC/SapB protein signature 65 87 9.3E-42 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 UP17_02670 710421f1f401f91095c3ba1be8f67dc8 165 SUPERFAMILY SSF116726 70 156 2.22E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_02670 710421f1f401f91095c3ba1be8f67dc8 165 Pfam PF02080 TrkA-C domain 89 158 2.6E-13 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 UP17_02670 710421f1f401f91095c3ba1be8f67dc8 165 PIRSF PIRSF005028 1 162 2.8E-51 T 11-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT UP17_02670 710421f1f401f91095c3ba1be8f67dc8 165 Gene3D G3DSA:3.30.70.1450 83 163 4.4E-18 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 UP17_11970 5ec0b5187ff7c61eb44d64222bfa9ab7 425 Pfam PF09335 SNARE associated Golgi protein 31 155 2.5E-18 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_11605 25c6b26309430189e850b2149d79383f 856 Gene3D G3DSA:3.40.50.300 514 658 2.5E-104 T 11-10-2018 UP17_11605 25c6b26309430189e850b2149d79383f 856 Gene3D G3DSA:3.40.50.300 372 513 2.5E-104 T 11-10-2018 UP17_11605 25c6b26309430189e850b2149d79383f 856 Pfam PF00271 Helicase conserved C-terminal domain 531 634 7.1E-14 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_11605 25c6b26309430189e850b2149d79383f 856 SUPERFAMILY SSF52540 372 643 1.85E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_11605 25c6b26309430189e850b2149d79383f 856 Gene3D G3DSA:1.20.272.40 659 694 2.5E-104 T 11-10-2018 UP17_11605 25c6b26309430189e850b2149d79383f 856 SMART SM00490 545 634 9.8E-22 T 11-10-2018 IPR001650 Helicase, C-terminal UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 SUPERFAMILY SSF52021 1 136 3.01E-49 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 208 222 7.8E-32 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 255 272 7.8E-32 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 238 254 7.8E-32 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 291 7.8E-32 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 169 183 7.8E-32 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 132 1.1E-48 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 SUPERFAMILY SSF52317 153 352 5.38E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 324 337 1.2E-9 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 238 249 1.2E-9 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 211 220 1.2E-9 T 11-10-2018 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 Gene3D G3DSA:3.50.30.20 1 145 1.1E-52 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 353 44.54 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 Pfam PF00117 Glutamine amidotransferase class-I 171 347 2.3E-46 T 11-10-2018 IPR017926 Glutamine amidotransferase UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 SMART SM01097 1 133 1.5E-69 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 Gene3D G3DSA:3.40.50.880 157 358 8.5E-33 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_05880 ecb25efd4b7a35fc2915054febd4ab94 360 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 350 4.8E-136 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 UP17_11685 c063e8f63f0b90df0f346badd216c1a5 539 SUPERFAMILY SSF51338 3 535 3.51E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_11685 c063e8f63f0b90df0f346badd216c1a5 539 Gene3D G3DSA:2.30.40.10 8 506 3.3E-143 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 UP17_11685 c063e8f63f0b90df0f346badd216c1a5 539 SUPERFAMILY SSF51556 61 491 3.26E-37 T 11-10-2018 IPR032466 Metal-dependent hydrolase UP17_11685 c063e8f63f0b90df0f346badd216c1a5 539 Gene3D G3DSA:3.20.20.140 62 490 3.3E-143 T 11-10-2018 UP17_11685 c063e8f63f0b90df0f346badd216c1a5 539 Gene3D G3DSA:3.10.310.70 80 200 3.3E-143 T 11-10-2018 UP17_11685 c063e8f63f0b90df0f346badd216c1a5 539 Pfam PF07969 Amidohydrolase family 51 531 5.9E-94 T 11-10-2018 IPR013108 Amidohydrolase 3 UP17_25210 44fcfb5ac9ecd59e1d0619f848a825cf 147 Pfam PF00583 Acetyltransferase (GNAT) family 38 133 9.0E-16 T 11-10-2018 IPR000182 GNAT domain UP17_25210 44fcfb5ac9ecd59e1d0619f848a825cf 147 Gene3D G3DSA:3.40.630.30 2 139 3.9E-36 T 11-10-2018 UP17_25210 44fcfb5ac9ecd59e1d0619f848a825cf 147 SUPERFAMILY SSF55729 1 143 4.05E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_07755 cae99d9c223cb49f3f19d3b5c7e541a5 131 PIRSF PIRSF002889 1 130 3.7E-31 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 UP17_07755 cae99d9c223cb49f3f19d3b5c7e541a5 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 128 4.6E-30 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 UP17_07755 cae99d9c223cb49f3f19d3b5c7e541a5 131 Pfam PF00460 Flagella basal body rod protein 9 38 1.3E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 UP17_19555 44cab231bce60db75a54e36ed8af8b68 229 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 1.0E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19555 44cab231bce60db75a54e36ed8af8b68 229 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 1.0E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19555 44cab231bce60db75a54e36ed8af8b68 229 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 1.0E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19555 44cab231bce60db75a54e36ed8af8b68 229 Gene3D G3DSA:3.40.50.1820 2 141 9.1E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_19555 44cab231bce60db75a54e36ed8af8b68 229 Pfam PF12697 Alpha/beta hydrolase family 28 215 1.6E-19 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_19555 44cab231bce60db75a54e36ed8af8b68 229 Gene3D G3DSA:3.40.50.1820 142 228 6.5E-13 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_19555 44cab231bce60db75a54e36ed8af8b68 229 SUPERFAMILY SSF53474 5 227 3.27E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_21400 ed62ce8884979d7cf9afe16b9e019d7c 235 Pfam PF08713 DNA alkylation repair enzyme 6 200 1.4E-21 T 11-10-2018 IPR014825 DNA alkylation repair enzyme UP17_21400 ed62ce8884979d7cf9afe16b9e019d7c 235 SUPERFAMILY SSF48371 1 235 3.45E-67 T 11-10-2018 IPR016024 Armadillo-type fold UP17_19660 bdc4bb3fd6fb54792723010df0ad7e82 76 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 2.3E-7 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 UP17_19660 bdc4bb3fd6fb54792723010df0ad7e82 76 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 2.3E-7 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 UP17_19660 bdc4bb3fd6fb54792723010df0ad7e82 76 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 2.3E-7 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 UP17_19660 bdc4bb3fd6fb54792723010df0ad7e82 76 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 67 1.9E-20 T 11-10-2018 UP17_19660 bdc4bb3fd6fb54792723010df0ad7e82 76 Gene3D G3DSA:3.30.70.20 2 76 3.8E-31 T 11-10-2018 UP17_19660 bdc4bb3fd6fb54792723010df0ad7e82 76 SUPERFAMILY SSF54862 4 72 1.47E-11 T 11-10-2018 UP17_17530 d0a2525fdba61b206382a4694e2e7d9d 490 Pfam PF00575 S1 RNA binding domain 38 93 3.3E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 UP17_17530 d0a2525fdba61b206382a4694e2e7d9d 490 SMART SM00316 37 117 8.8E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 UP17_17530 d0a2525fdba61b206382a4694e2e7d9d 490 SUPERFAMILY SSF50249 39 116 4.46E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_17530 d0a2525fdba61b206382a4694e2e7d9d 490 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 14 418 9.7E-114 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 UP17_17530 d0a2525fdba61b206382a4694e2e7d9d 490 Gene3D G3DSA:2.40.50.140 32 121 7.8E-26 T 11-10-2018 UP17_17530 d0a2525fdba61b206382a4694e2e7d9d 490 Pfam PF10150 Ribonuclease E/G family 124 385 2.4E-75 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 UP17_03890 36066ec0d7e90d7d05288c3e8b2c5503 158 Gene3D G3DSA:3.10.129.10 2 158 8.3E-55 T 11-10-2018 UP17_03890 36066ec0d7e90d7d05288c3e8b2c5503 158 Pfam PF03061 Thioesterase superfamily 29 101 2.4E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_03890 36066ec0d7e90d7d05288c3e8b2c5503 158 SUPERFAMILY SSF54637 11 157 8.55E-45 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_08935 98068924ce34fcb44d3fc12824e439cd 169 Gene3D G3DSA:1.20.120.450 3 166 4.9E-39 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_08935 98068924ce34fcb44d3fc12824e439cd 169 SUPERFAMILY SSF109854 8 152 2.56E-28 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_08935 98068924ce34fcb44d3fc12824e439cd 169 Pfam PF05163 DinB family 1 168 1.7E-34 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB UP17_12660 8ec29592d0087294a5dacfb727becbf4 216 SMART SM00702 39 213 6.1E-44 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 UP17_12660 8ec29592d0087294a5dacfb727becbf4 216 Gene3D G3DSA:2.60.120.620 20 214 5.4E-63 T 11-10-2018 UP17_12660 8ec29592d0087294a5dacfb727becbf4 216 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 116 213 1.3E-16 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 UP17_09150 19dff8b90e99f357851212645de62ae9 300 SUPERFAMILY SSF51430 3 292 7.33E-74 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_09150 19dff8b90e99f357851212645de62ae9 300 Gene3D G3DSA:3.20.20.100 1 300 7.9E-100 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily UP17_09150 19dff8b90e99f357851212645de62ae9 300 Pfam PF00248 Aldo/keto reductase family 15 289 9.2E-60 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain UP17_13135 352a6c8a241373f67d49e037fa64fdee 265 Pfam PF04231 Endonuclease I 59 259 1.6E-35 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 UP17_13135 352a6c8a241373f67d49e037fa64fdee 265 SUPERFAMILY SSF54060 122 259 3.53E-40 T 11-10-2018 UP17_23545 c2fd60f1126d29d9dc021c3849250ba2 252 Pfam PF00977 Histidine biosynthesis protein 5 235 3.8E-87 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 UP17_23545 c2fd60f1126d29d9dc021c3849250ba2 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 48.701 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UP17_23545 c2fd60f1126d29d9dc021c3849250ba2 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 1.3E-118 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UP17_23545 c2fd60f1126d29d9dc021c3849250ba2 252 Gene3D G3DSA:3.20.20.70 1 252 3.6E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_23545 c2fd60f1126d29d9dc021c3849250ba2 252 SUPERFAMILY SSF51366 1 252 9.42E-81 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_15255 e5e289b46a2d61e1283c1d8a6f093b29 127 Gene3D G3DSA:2.40.40.20 1 125 1.1E-53 T 11-10-2018 UP17_15255 e5e289b46a2d61e1283c1d8a6f093b29 127 PIRSF PIRSF006246 1 126 4.3E-54 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 UP17_15255 e5e289b46a2d61e1283c1d8a6f093b29 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 72.118 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 UP17_15255 e5e289b46a2d61e1283c1d8a6f093b29 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.4E-52 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 UP17_15255 e5e289b46a2d61e1283c1d8a6f093b29 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 95 4.0E-38 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 UP17_15255 e5e289b46a2d61e1283c1d8a6f093b29 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 1.8E-57 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 UP17_15255 e5e289b46a2d61e1283c1d8a6f093b29 127 SUPERFAMILY SSF50692 1 121 4.06E-50 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 261 3.3E-62 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 SUPERFAMILY SSF53850 6 263 6.16E-69 T 11-10-2018 UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 Gene3D G3DSA:3.40.190.10 125 223 1.8E-74 T 11-10-2018 UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 SMART SM00079 41 262 2.6E-6 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 Gene3D G3DSA:3.40.190.10 47 260 1.8E-74 T 11-10-2018 UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 SMART SM00062 41 263 2.0E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_03700 1e72f55e44bed8cd42a6e67c4a1b860c 273 ProSitePatterns PS00276 Channel forming colicins signature. 84 95 - T 11-10-2018 IPR000293 Channel forming colicin, C-terminal cytotoxic GO:0016021|GO:0019835|GO:0050829 UP17_20475 38e0763d0985b56c782edb7bac218037 88 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 9.4E-14 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 UP17_20475 38e0763d0985b56c782edb7bac218037 88 SUPERFAMILY SSF52794 1 84 1.2E-17 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 UP17_20475 38e0763d0985b56c782edb7bac218037 88 Gene3D G3DSA:3.40.50.2300 1 87 1.0E-18 T 11-10-2018 UP17_15125 f05133ed38bb04866ce2164a9c2bea8d 151 Gene3D G3DSA:2.60.40.790 7 151 2.1E-28 T 11-10-2018 IPR008978 HSP20-like chaperone UP17_15125 f05133ed38bb04866ce2164a9c2bea8d 151 SUPERFAMILY SSF49764 43 147 6.8E-24 T 11-10-2018 IPR008978 HSP20-like chaperone UP17_15125 f05133ed38bb04866ce2164a9c2bea8d 151 Pfam PF00011 Hsp20/alpha crystallin family 55 144 2.7E-16 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain UP17_18405 80624553362d5856919148c4de0ac19d 564 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 562 21.306 T 11-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 UP17_18405 80624553362d5856919148c4de0ac19d 564 Pfam PF06160 Septation ring formation regulator, EzrA 3 556 3.8E-166 T 11-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 UP17_11345 6ad1fda0d2ba3a3d0285a05998fe3774 142 SUPERFAMILY SSF46689 29 133 8.15E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_08980 6ad1fda0d2ba3a3d0285a05998fe3774 142 SUPERFAMILY SSF46689 29 133 8.15E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_08315 6ad1fda0d2ba3a3d0285a05998fe3774 142 SUPERFAMILY SSF46689 29 133 8.15E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_03140 6ad1fda0d2ba3a3d0285a05998fe3774 142 SUPERFAMILY SSF46689 29 133 8.15E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_25415 5bc6d3ed77f4fbec13f6fffba4f02949 411 Pfam PF02371 Transposase IS116/IS110/IS902 family 254 335 4.0E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 UP17_25415 5bc6d3ed77f4fbec13f6fffba4f02949 411 Pfam PF01548 Transposase 9 155 8.6E-27 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 UP17_11980 de54f6ad3bb2b667e1ab32f03276a1ca 196 Pfam PF09335 SNARE associated Golgi protein 30 156 5.0E-20 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_09555 7731e03c665a1a2f2d294f4e52258901 98 SUPERFAMILY SSF52821 2 94 1.57E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_09555 7731e03c665a1a2f2d294f4e52258901 98 Gene3D G3DSA:3.40.250.10 1 98 5.1E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily UP17_09555 7731e03c665a1a2f2d294f4e52258901 98 Pfam PF00581 Rhodanese-like domain 6 94 1.7E-14 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_09555 7731e03c665a1a2f2d294f4e52258901 98 SMART SM00450 4 96 1.7E-17 T 11-10-2018 IPR001763 Rhodanese-like domain UP17_19720 9d411c779f7aa3cb8ed12658c0a8bf40 231 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 UP17_19720 9d411c779f7aa3cb8ed12658c0a8bf40 231 Gene3D G3DSA:3.40.1080.10 1 226 1.1E-98 T 11-10-2018 UP17_19720 9d411c779f7aa3cb8ed12658c0a8bf40 231 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 5.2E-83 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 UP17_19720 9d411c779f7aa3cb8ed12658c0a8bf40 231 Pfam PF01144 Coenzyme A transferase 7 214 5.0E-77 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19720 9d411c779f7aa3cb8ed12658c0a8bf40 231 SMART SM00882 5 216 2.1E-88 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19720 9d411c779f7aa3cb8ed12658c0a8bf40 231 SUPERFAMILY SSF100950 2 227 1.81E-87 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_23775 34f5477731dfcc2fb4992b4b9da1db19 87 Pfam PF04316 Anti-sigma-28 factor, FlgM 33 83 5.1E-13 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal UP17_23775 34f5477731dfcc2fb4992b4b9da1db19 87 SUPERFAMILY SSF101498 1 85 2.48E-19 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily UP17_23775 34f5477731dfcc2fb4992b4b9da1db19 87 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 85 4.2E-16 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 UP17_21685 bc0ea537ee5536784ab51dbb74371aa5 152 Pfam PF14154 Domain of unknown function (DUF4306) 5 85 5.7E-26 T 11-10-2018 IPR025440 Protein of unknown function DUF4306 UP17_07740 d37f0e80313189ddc4da949580f11450 175 PIRSF PIRSF039093 1 175 9.1E-83 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 UP17_07740 d37f0e80313189ddc4da949580f11450 175 SUPERFAMILY SSF56235 1 174 1.61E-58 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_07740 d37f0e80313189ddc4da949580f11450 175 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 175 41.086 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 UP17_07740 d37f0e80313189ddc4da949580f11450 175 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 175 1.3E-83 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 UP17_07740 d37f0e80313189ddc4da949580f11450 175 Pfam PF00227 Proteasome subunit 2 173 2.6E-26 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 UP17_07740 d37f0e80313189ddc4da949580f11450 175 Gene3D G3DSA:3.60.20.10 1 175 1.1E-67 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_06555 5e1f822c14af262c652052323ede55d2 261 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 244 29.401 T 11-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 UP17_06555 5e1f822c14af262c652052323ede55d2 261 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 52 241 2.4E-54 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_06555 5e1f822c14af262c652052323ede55d2 261 Pfam PF02096 60Kd inner membrane protein 53 241 1.9E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 UP17_20065 e1bb6d72a2da8abc10ea9268d7d8a9d2 145 SUPERFAMILY SSF160631 7 139 1.12E-14 T 11-10-2018 UP17_20065 e1bb6d72a2da8abc10ea9268d7d8a9d2 145 SMART SM00860 16 132 4.6E-9 T 11-10-2018 IPR018958 Knr4/Smi1-like domain UP17_20065 e1bb6d72a2da8abc10ea9268d7d8a9d2 145 Gene3D G3DSA:3.40.1580.10 3 137 1.5E-10 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily UP17_20065 e1bb6d72a2da8abc10ea9268d7d8a9d2 145 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 16 131 5.5E-12 T 11-10-2018 IPR018958 Knr4/Smi1-like domain UP17_09545 2e6af9d9322bd9423b09ef5bd75bcdfa 159 Gene3D G3DSA:3.40.1260.10 1 159 1.0E-66 T 11-10-2018 IPR027396 DsrEFH-like UP17_09545 2e6af9d9322bd9423b09ef5bd75bcdfa 159 SUPERFAMILY SSF75169 6 157 1.01E-22 T 11-10-2018 IPR027396 DsrEFH-like UP17_09545 2e6af9d9322bd9423b09ef5bd75bcdfa 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 158 4.5E-69 T 11-10-2018 IPR032836 DsrE2-like family UP17_20655 1e1ea5bffd2e0bb5edb5102f8c2533aa 255 Gene3D G3DSA:3.30.565.10 109 243 2.5E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_20655 1e1ea5bffd2e0bb5edb5102f8c2533aa 255 Pfam PF06580 Histidine kinase 54 133 3.0E-20 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 UP17_20655 1e1ea5bffd2e0bb5edb5102f8c2533aa 255 SUPERFAMILY SSF55874 117 243 4.32E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_14605 5c08f3e395a48ce3cac3773c225de38a 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 233 248 8.6E-5 T 11-10-2018 UP17_14605 5c08f3e395a48ce3cac3773c225de38a 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 33 55 8.6E-5 T 11-10-2018 UP17_14605 5c08f3e395a48ce3cac3773c225de38a 428 Pfam PF01266 FAD dependent oxidoreductase 33 385 2.7E-61 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 UP17_14605 5c08f3e395a48ce3cac3773c225de38a 428 Gene3D G3DSA:3.30.9.10 126 347 5.2E-77 T 11-10-2018 UP17_14605 5c08f3e395a48ce3cac3773c225de38a 428 SUPERFAMILY SSF51905 32 404 8.63E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_14605 5c08f3e395a48ce3cac3773c225de38a 428 Gene3D G3DSA:3.50.50.60 33 386 5.2E-77 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily UP17_07315 8f86eca49a9b507c55a5e2e7126fd2bb 368 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_07315 8f86eca49a9b507c55a5e2e7126fd2bb 368 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 11 364 1.9E-178 T 11-10-2018 IPR013438 Sporulation stage V, protein E UP17_07315 8f86eca49a9b507c55a5e2e7126fd2bb 368 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 12 365 2.1E-131 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_07315 8f86eca49a9b507c55a5e2e7126fd2bb 368 Pfam PF01098 Cell cycle protein 14 367 4.8E-127 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_19070 78266c5d74377bb8919ef035b2085696 216 Gene3D G3DSA:1.20.144.10 121 216 2.7E-28 T 11-10-2018 UP17_19070 78266c5d74377bb8919ef035b2085696 216 Gene3D G3DSA:1.20.144.10 2 120 3.9E-9 T 11-10-2018 UP17_19070 78266c5d74377bb8919ef035b2085696 216 SUPERFAMILY SSF48317 6 212 3.92E-41 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily UP17_19070 78266c5d74377bb8919ef035b2085696 216 SMART SM00014 89 201 5.0E-32 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_19070 78266c5d74377bb8919ef035b2085696 216 Pfam PF01569 PAP2 superfamily 90 206 1.7E-21 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase UP17_05190 acc1886cee99c259997dfb29d20a1dd1 670 Gene3D G3DSA:1.10.3810.10 47 245 1.8E-76 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_05190 acc1886cee99c259997dfb29d20a1dd1 670 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 610 1.1E-185 T 11-10-2018 UP17_05190 acc1886cee99c259997dfb29d20a1dd1 670 Pfam PF00905 Penicillin binding protein transpeptidase domain 329 604 6.5E-35 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 UP17_05190 acc1886cee99c259997dfb29d20a1dd1 670 SUPERFAMILY SSF53955 43 250 9.28E-73 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily UP17_05190 acc1886cee99c259997dfb29d20a1dd1 670 Pfam PF00912 Transglycosylase 55 228 6.1E-64 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_05190 acc1886cee99c259997dfb29d20a1dd1 670 Gene3D G3DSA:3.40.710.10 258 611 4.0E-126 T 11-10-2018 UP17_05190 acc1886cee99c259997dfb29d20a1dd1 670 SUPERFAMILY SSF56601 210 612 1.69E-108 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_00695 4dfe365664810fa50003b89a1b926e9e 207 SUPERFAMILY SSF52166 1 206 4.32E-85 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00695 4dfe365664810fa50003b89a1b926e9e 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 1.2E-73 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 UP17_00695 4dfe365664810fa50003b89a1b926e9e 207 Gene3D G3DSA:3.40.1370.10 2 207 1.1E-83 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 UP17_00695 4dfe365664810fa50003b89a1b926e9e 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 38.084 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_00695 4dfe365664810fa50003b89a1b926e9e 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 7.1E-83 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 UP17_05940 b9db47331cf1f170064a47a30185a64b 277 Gene3D G3DSA:3.40.50.720 1 274 2.4E-5 T 11-10-2018 UP17_05940 b9db47331cf1f170064a47a30185a64b 277 SUPERFAMILY SSF51735 3 222 1.12E-5 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 447 1.2E-148 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 Pfam PF01235 Sodium:alanine symporter family 49 459 2.9E-159 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 PRINTS PR00175 Sodium/alanine symporter signature 295 313 2.4E-60 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 PRINTS PR00175 Sodium/alanine symporter signature 353 375 2.4E-60 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.4E-60 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 PRINTS PR00175 Sodium/alanine symporter signature 176 194 2.4E-60 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 PRINTS PR00175 Sodium/alanine symporter signature 204 223 2.4E-60 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22425 4ac8714ca15e2e83017383d737ecf657 484 PRINTS PR00175 Sodium/alanine symporter signature 416 436 2.4E-60 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 PIRSF PIRSF001467 4 145 4.1E-41 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 2.1E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 2.1E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 2.1E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 2.1E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 2.1E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 SUPERFAMILY SSF50891 10 138 4.38E-47 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 138 2.5E-41 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 UP17_22525 c4c1d671d19f4fda2fbdf9801a1953b4 146 Gene3D G3DSA:2.40.100.10 1 146 6.7E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_16130 0b6a7840d3a785ce0b2b71ed73925006 402 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 80 395 1.3E-108 T 11-10-2018 IPR014194 Sporulation stage III, protein AE UP17_16130 0b6a7840d3a785ce0b2b71ed73925006 402 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 7 395 2.7E-145 T 11-10-2018 IPR014194 Sporulation stage III, protein AE UP17_02170 8fabec2b0dc1dd114a5db9012fb54a01 220 Gene3D G3DSA:2.60.40.2230 23 171 1.2E-34 T 11-10-2018 IPR038507 YcnI-like superfamily UP17_02170 8fabec2b0dc1dd114a5db9012fb54a01 220 Pfam PF07987 Domain of unkown function (DUF1775) 25 140 9.4E-20 T 11-10-2018 IPR012533 YcnI-like UP17_19265 57267cec132c264a5b2b08b4705b357f 153 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 124 1.3E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_19265 57267cec132c264a5b2b08b4705b357f 153 SUPERFAMILY SSF54593 1 128 2.34E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_19265 57267cec132c264a5b2b08b4705b357f 153 Gene3D G3DSA:3.10.180.10 1 136 1.9E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_24165 478b6dfb8ed5bd45b23562915b78d52a 172 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 22 167 2.0E-43 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 UP17_24165 478b6dfb8ed5bd45b23562915b78d52a 172 Hamap MF_01398 ATP synthase subunit b [atpF]. 13 150 13.679 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 UP17_24165 478b6dfb8ed5bd45b23562915b78d52a 172 Pfam PF00430 ATP synthase B/B' CF(0) 19 149 1.3E-38 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 UP17_24165 478b6dfb8ed5bd45b23562915b78d52a 172 SUPERFAMILY SSF81573 75 133 4.58E-10 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily UP17_20725 18edb4e7bad3b5fa1418bf9fea6b1bf2 341 Pfam PF06030 Bacterial protein of unknown function (DUF916) 32 150 1.2E-44 T 11-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative UP17_20725 18edb4e7bad3b5fa1418bf9fea6b1bf2 341 Pfam PF11797 Protein of unknown function C-terminal (DUF3324) 163 298 4.0E-52 T 11-10-2018 IPR021759 Domain of unknown function DUF3324, C-terminal UP17_24490 0f6676d86073a2e897dc304624c35b2a 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 5 221 3.9E-106 T 11-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 UP17_24490 0f6676d86073a2e897dc304624c35b2a 221 SUPERFAMILY SSF102588 4 195 8.37E-52 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_24490 0f6676d86073a2e897dc304624c35b2a 221 Gene3D G3DSA:3.40.50.10320 1 215 9.0E-52 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 UP17_24490 0f6676d86073a2e897dc304624c35b2a 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 137 3.2E-29 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 UP17_14355 cb151eaa36037395cdb554e636e3913b 63 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 9.0E-19 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_14355 cb151eaa36037395cdb554e636e3913b 63 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 62 18.211 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 UP17_14355 cb151eaa36037395cdb554e636e3913b 63 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.6E-6 T 11-10-2018 UP17_14355 cb151eaa36037395cdb554e636e3913b 63 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.6E-6 T 11-10-2018 UP17_14355 cb151eaa36037395cdb554e636e3913b 63 Pfam PF02416 mttA/Hcf106 family 4 55 6.6E-21 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 SUPERFAMILY SSF88946 16 105 2.22E-23 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 PIRSF PIRSF002939 4 216 3.7E-109 T 11-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 60 73 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 209 2.7E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 SUPERFAMILY SSF88659 123 210 1.57E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 Pfam PF08281 Sigma-70, region 4 159 205 1.9E-9 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 Pfam PF04542 Sigma-70 region 2 36 105 1.4E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 14 210 7.8E-112 T 11-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_00610 8edc1a310efa6e1e8fba9727f23e45d6 216 SMART SM00421 160 209 0.0041 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 UP17_23205 6c5c7675016d13478f5478adc35f0c96 305 PIRSF PIRSF000196 1 305 2.4E-127 T 11-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 UP17_23205 6c5c7675016d13478f5478adc35f0c96 305 SUPERFAMILY SSF51730 37 300 3.18E-72 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like UP17_23205 6c5c7675016d13478f5478adc35f0c96 305 Pfam PF01619 Proline dehydrogenase 46 297 9.0E-35 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 UP17_23205 6c5c7675016d13478f5478adc35f0c96 305 Gene3D G3DSA:3.20.20.530 19 305 6.5E-95 T 11-10-2018 UP17_15905 d19d929ebfd24233a46652842df54545 308 SMART SM00849 18 209 1.9E-4 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_15905 d19d929ebfd24233a46652842df54545 308 SUPERFAMILY SSF56281 3 304 1.57E-83 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_15905 d19d929ebfd24233a46652842df54545 308 Gene3D G3DSA:3.60.15.10 2 304 1.0E-103 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_15905 d19d929ebfd24233a46652842df54545 308 Pfam PF00753 Metallo-beta-lactamase superfamily 26 140 2.8E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_15905 d19d929ebfd24233a46652842df54545 308 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 304 4.8E-114 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 UP17_15905 d19d929ebfd24233a46652842df54545 308 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 39.997 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 UP17_11110 f11a520773ec483bb67491a3ec40bc98 299 Gene3D G3DSA:3.20.20.70 1 299 4.4E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_11110 f11a520773ec483bb67491a3ec40bc98 299 SUPERFAMILY SSF51569 2 297 6.59E-73 T 11-10-2018 UP17_11110 f11a520773ec483bb67491a3ec40bc98 299 Pfam PF00682 HMGL-like 6 278 3.5E-50 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 UP17_18745 df572d329eadde50e01cc1a1bc039835 253 Gene3D G3DSA:3.40.50.300 1 244 2.3E-66 T 11-10-2018 UP17_18745 df572d329eadde50e01cc1a1bc039835 253 SMART SM00382 32 220 2.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_18745 df572d329eadde50e01cc1a1bc039835 253 Pfam PF00005 ABC transporter 23 171 4.7E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_18745 df572d329eadde50e01cc1a1bc039835 253 SUPERFAMILY SSF52540 3 226 6.33E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_22000 65c2276b4b66767a35ba687eb8d124fb 87 Pfam PF10732 Protein of unknown function (DUF2524) 1 84 2.6E-28 T 11-10-2018 IPR019668 Uncharacterised protein family YtzC UP17_20320 f671b82537d10ce684ef776f10f60a96 89 SUPERFAMILY SSF103481 10 80 4.84E-9 T 11-10-2018 UP17_20320 f671b82537d10ce684ef776f10f60a96 89 Pfam PF00892 EamA-like transporter family 11 80 1.4E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_16245 402e313957d166f4092c106fdc3a0904 128 Pfam PF14173 ComG operon protein 7 32 124 3.3E-14 T 11-10-2018 IPR020372 Competence operon G protein 7, ComGG UP17_05760 5f8e4897ff1dd7ea6d2d9730d5f120bf 393 Pfam PF04235 Protein of unknown function (DUF418) 233 387 2.1E-45 T 11-10-2018 IPR007349 Domain of unknown function DUF418 UP17_05980 d7e566bf7f225e3c1983723c35e0bc12 392 SUPERFAMILY SSF51445 113 263 3.75E-5 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_05980 d7e566bf7f225e3c1983723c35e0bc12 392 Pfam PF13200 Putative glycosyl hydrolase domain 62 384 6.3E-126 T 11-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 UP17_05900 c29e13ece0d3b14d73a4fff38d141eb1 252 Pfam PF01614 Bacterial transcriptional regulator 129 244 2.5E-5 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal UP17_05900 c29e13ece0d3b14d73a4fff38d141eb1 252 SMART SM00346 10 100 3.5E-20 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_05900 c29e13ece0d3b14d73a4fff38d141eb1 252 Gene3D G3DSA:1.10.10.10 7 81 3.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_05900 c29e13ece0d3b14d73a4fff38d141eb1 252 SUPERFAMILY SSF55781 84 248 1.57E-22 T 11-10-2018 UP17_05900 c29e13ece0d3b14d73a4fff38d141eb1 252 Gene3D G3DSA:3.30.450.40 82 252 2.1E-17 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_05900 c29e13ece0d3b14d73a4fff38d141eb1 252 SUPERFAMILY SSF46785 10 82 3.71E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_05900 c29e13ece0d3b14d73a4fff38d141eb1 252 Pfam PF09339 IclR helix-turn-helix domain 12 62 1.8E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 UP17_25545 a06bd9e3acf90a5027f743d24085145d 275 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_25545 a06bd9e3acf90a5027f743d24085145d 275 SUPERFAMILY SSF52540 8 258 1.22E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_25545 a06bd9e3acf90a5027f743d24085145d 275 SMART SM00382 37 236 2.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_25545 a06bd9e3acf90a5027f743d24085145d 275 Gene3D G3DSA:3.40.50.300 6 273 2.7E-77 T 11-10-2018 UP17_25545 a06bd9e3acf90a5027f743d24085145d 275 Pfam PF00005 ABC transporter 29 186 8.3E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_25545 a06bd9e3acf90a5027f743d24085145d 275 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 27 262 1.5E-99 T 11-10-2018 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 UP17_23995 19d76a0f50c7a8a61c2ba9ffa70bdd2b 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 320 1.4E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_23995 19d76a0f50c7a8a61c2ba9ffa70bdd2b 322 Pfam PF00005 ABC transporter 33 183 5.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_23995 19d76a0f50c7a8a61c2ba9ffa70bdd2b 322 Gene3D G3DSA:3.40.50.300 3 322 2.5E-104 T 11-10-2018 UP17_23995 19d76a0f50c7a8a61c2ba9ffa70bdd2b 322 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_23995 19d76a0f50c7a8a61c2ba9ffa70bdd2b 322 SUPERFAMILY SSF52540 5 255 7.1E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_23995 19d76a0f50c7a8a61c2ba9ffa70bdd2b 322 SMART SM00382 41 233 4.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_23995 19d76a0f50c7a8a61c2ba9ffa70bdd2b 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 2.0E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 Pfam PF00294 pfkB family carbohydrate kinase 8 314 9.9E-71 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 Gene3D G3DSA:3.40.1190.20 3 321 6.7E-84 T 11-10-2018 IPR029056 Ribokinase-like UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 PRINTS PR00990 Ribokinase signature 33 52 9.1E-6 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 PRINTS PR00990 Ribokinase signature 188 203 9.1E-6 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 PRINTS PR00990 Ribokinase signature 227 238 9.1E-6 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 UP17_13675 fa58795a1ab252c99f1b0a91e5dc45ad 321 SUPERFAMILY SSF53613 7 320 3.74E-77 T 11-10-2018 IPR029056 Ribokinase-like UP17_05000 f04646e107a19323c517b82fc4ae32df 477 Gene3D G3DSA:1.20.1480.50 158 254 5.2E-10 T 11-10-2018 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 472 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 453 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 SMART SM00387 363 475 1.9E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05000 f04646e107a19323c517b82fc4ae32df 477 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 364 473 3.4E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05000 f04646e107a19323c517b82fc4ae32df 477 Gene3D G3DSA:3.30.565.10 320 476 3.6E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_05000 f04646e107a19323c517b82fc4ae32df 477 SUPERFAMILY SSF55874 306 471 1.96E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_05000 f04646e107a19323c517b82fc4ae32df 477 Gene3D G3DSA:1.10.287.130 255 312 3.2E-13 T 11-10-2018 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 316 1.9E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 SUPERFAMILY SSF47384 235 317 3.73E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 SMART SM00388 251 317 8.9E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 SUPERFAMILY SSF158472 195 246 8.76E-5 T 11-10-2018 UP17_05000 f04646e107a19323c517b82fc4ae32df 477 SMART SM00304 195 250 7.9E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 UP17_05135 55bcee3d654711cf5cc21f027ccbee50 334 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 2 328 8.1E-88 T 11-10-2018 IPR014227 Putative transport protein YtvI-like UP17_05135 55bcee3d654711cf5cc21f027ccbee50 334 Pfam PF01594 AI-2E family transporter 2 323 1.3E-44 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 4.2E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 4.2E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 4.2E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 Gene3D G3DSA:3.30.70.920 53 136 3.9E-12 T 11-10-2018 UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 Pfam PF01037 Lrp/AsnC ligand binding domain 88 135 4.6E-7 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 Gene3D G3DSA:1.10.10.10 1 52 1.8E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 SUPERFAMILY SSF54909 64 135 8.58E-8 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 SMART SM00344 2 109 2.3E-26 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 49 9.1E-14 T 11-10-2018 UP17_20995 79e5128b8a4381334a72877f2acbe81d 136 SUPERFAMILY SSF46785 1 61 6.4E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_10705 edf5c8a35280a7fc2c7d063edc43abf6 344 Gene3D G3DSA:2.40.100.10 230 343 5.3E-33 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_10705 edf5c8a35280a7fc2c7d063edc43abf6 344 Pfam PF05913 Bacterial protein of unknown function (DUF871) 2 333 1.3E-97 T 11-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic UP17_10705 edf5c8a35280a7fc2c7d063edc43abf6 344 SUPERFAMILY SSF50891 233 333 1.97E-26 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily UP17_10705 edf5c8a35280a7fc2c7d063edc43abf6 344 Gene3D G3DSA:3.20.20.70 1 229 1.8E-70 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_10705 edf5c8a35280a7fc2c7d063edc43abf6 344 SUPERFAMILY SSF51445 2 226 9.69E-61 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily UP17_04345 1f8c1b11f6b462946c3052dc2f727c0b 393 Gene3D G3DSA:3.90.1150.10 13 381 3.6E-159 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_04345 1f8c1b11f6b462946c3052dc2f727c0b 393 Pfam PF00155 Aminotransferase class I and II 45 382 2.1E-40 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 UP17_04345 1f8c1b11f6b462946c3052dc2f727c0b 393 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 387 5.7E-161 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 UP17_04345 1f8c1b11f6b462946c3052dc2f727c0b 393 SUPERFAMILY SSF53383 1 388 2.99E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_04345 1f8c1b11f6b462946c3052dc2f727c0b 393 Gene3D G3DSA:3.40.640.10 68 291 3.6E-159 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_21055 9947a9ccc04dcce6259ac4083001d02b 211 Gene3D G3DSA:3.40.50.360 1 211 4.4E-61 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_21055 9947a9ccc04dcce6259ac4083001d02b 211 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 27.432 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 UP17_21055 9947a9ccc04dcce6259ac4083001d02b 211 Pfam PF02525 Flavodoxin-like fold 2 205 2.6E-43 T 11-10-2018 IPR003680 Flavodoxin-like fold UP17_21055 9947a9ccc04dcce6259ac4083001d02b 211 SUPERFAMILY SSF52218 1 209 1.47E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_19585 12969d2d4f43ad845039c6480014b012 472 PIRSF PIRSF006060 2 472 5.2E-55 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_19585 12969d2d4f43ad845039c6480014b012 472 Gene3D G3DSA:1.20.1740.10 23 470 6.8E-50 T 11-10-2018 UP17_19585 12969d2d4f43ad845039c6480014b012 472 Pfam PF00324 Amino acid permease 35 418 2.4E-47 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_02740 9ac79ffa66a7478d7988af868510724f 272 Pfam PF03631 Virulence factor BrkB 16 266 5.1E-72 T 11-10-2018 IPR017039 Virulence factor BrkB UP17_02740 9ac79ffa66a7478d7988af868510724f 272 PIRSF PIRSF035875 1 270 7.2E-83 T 11-10-2018 IPR017039 Virulence factor BrkB UP17_02740 9ac79ffa66a7478d7988af868510724f 272 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 4 265 4.3E-65 T 11-10-2018 IPR017039 Virulence factor BrkB UP17_10185 604d6cc3112373e4023fe68254f3c7d9 429 Pfam PF07690 Major Facilitator Superfamily 18 364 3.9E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_10185 604d6cc3112373e4023fe68254f3c7d9 429 Gene3D G3DSA:1.20.1250.20 2 199 4.1E-38 T 11-10-2018 UP17_10185 604d6cc3112373e4023fe68254f3c7d9 429 SUPERFAMILY SSF103473 3 413 6.67E-67 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_10185 604d6cc3112373e4023fe68254f3c7d9 429 Gene3D G3DSA:1.20.1250.20 213 422 1.9E-25 T 11-10-2018 UP17_17220 78a75cfe165d0e2a2ab3960b8c06f58f 293 Pfam PF01370 NAD dependent epimerase/dehydratase family 39 165 8.6E-16 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 UP17_17220 78a75cfe165d0e2a2ab3960b8c06f58f 293 Gene3D G3DSA:3.40.50.720 1 268 4.7E-39 T 11-10-2018 UP17_17220 78a75cfe165d0e2a2ab3960b8c06f58f 293 SUPERFAMILY SSF51735 1 233 3.62E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_19770 e85159b46faf74d9c27e282ab73d55b1 253 Pfam PF02678 Pirin 54 117 6.1E-16 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 UP17_19770 e85159b46faf74d9c27e282ab73d55b1 253 Gene3D G3DSA:2.60.120.10 29 241 2.8E-38 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_19770 e85159b46faf74d9c27e282ab73d55b1 253 SUPERFAMILY SSF51182 34 241 1.51E-33 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_20760 a6d10c930a61617ae77560509c8baeb7 654 Pfam PF02538 Hydantoinase B/oxoprolinase 11 535 1.3E-145 T 11-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 UP17_07340 18218b989e61fa03502902700fcbe288 121 Pfam PF06947 Protein of unknown function (DUF1290) 22 107 9.6E-36 T 11-10-2018 IPR009709 Protein of unknown function DUF1290 UP17_07340 18218b989e61fa03502902700fcbe288 121 PIRSF PIRSF018579 1 113 2.0E-46 T 11-10-2018 IPR009709 Protein of unknown function DUF1290 UP17_07380 5f410f9bbdb9ee4fd996ca6247532237 223 Gene3D G3DSA:3.20.20.10 1 223 1.1E-74 T 11-10-2018 IPR029066 PLP-binding barrel UP17_07380 5f410f9bbdb9ee4fd996ca6247532237 223 PIRSF PIRSF004848 2 223 9.8E-65 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 UP17_07380 5f410f9bbdb9ee4fd996ca6247532237 223 SUPERFAMILY SSF51419 3 222 1.09E-70 T 11-10-2018 IPR029066 PLP-binding barrel UP17_07380 5f410f9bbdb9ee4fd996ca6247532237 223 Pfam PF01168 Alanine racemase, N-terminal domain 7 222 3.9E-19 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 UP17_07380 5f410f9bbdb9ee4fd996ca6247532237 223 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 223 28.038 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 UP17_07380 5f410f9bbdb9ee4fd996ca6247532237 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 223 1.5E-52 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 UP17_23745 71363008e5ab47d567ba7f9ff3674c77 77 SUPERFAMILY SSF117130 1 55 6.67E-21 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 UP17_23745 71363008e5ab47d567ba7f9ff3674c77 77 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 17.898 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 UP17_23745 71363008e5ab47d567ba7f9ff3674c77 77 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 69 2.1E-30 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 UP17_23745 71363008e5ab47d567ba7f9ff3674c77 77 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-16 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 UP17_23745 71363008e5ab47d567ba7f9ff3674c77 77 Gene3D G3DSA:3.30.70.1680 1 63 1.8E-29 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 UP17_23745 71363008e5ab47d567ba7f9ff3674c77 77 Pfam PF02599 Global regulator protein family 1 53 6.8E-27 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 UP17_20910 0e7a1f3b631c6da5805d398ed5585371 67 Gene3D G3DSA:1.10.260.40 1 65 1.9E-24 T 11-10-2018 UP17_20910 0e7a1f3b631c6da5805d398ed5585371 67 Pfam PF01381 Helix-turn-helix 5 58 1.6E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_20910 0e7a1f3b631c6da5805d398ed5585371 67 SUPERFAMILY SSF47413 3 65 5.07E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_20910 0e7a1f3b631c6da5805d398ed5585371 67 SMART SM00530 4 59 9.2E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_21690 8af5db409aad397de6c538a5c4959bbd 131 SUPERFAMILY SSF54593 6 131 8.94E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_21690 8af5db409aad397de6c538a5c4959bbd 131 Gene3D G3DSA:3.10.180.10 1 131 2.6E-34 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_21690 8af5db409aad397de6c538a5c4959bbd 131 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 117 1.6E-9 T 11-10-2018 UP17_17230 0ba9e5f6e19b13a9a99a850f4e1dd5fb 293 Pfam PF00483 Nucleotidyl transferase 6 258 9.9E-36 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 UP17_17230 0ba9e5f6e19b13a9a99a850f4e1dd5fb 293 SUPERFAMILY SSF53448 4 274 2.5E-70 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_17230 0ba9e5f6e19b13a9a99a850f4e1dd5fb 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 1.2E-122 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 UP17_17230 0ba9e5f6e19b13a9a99a850f4e1dd5fb 293 Gene3D G3DSA:3.90.550.10 1 288 6.9E-95 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_22145 595eb1f99bf58c676ed318dbd297dcfc 79 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 77 8.7E-33 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor UP17_22145 595eb1f99bf58c676ed318dbd297dcfc 79 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 69 1.0E-19 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor UP17_22145 595eb1f99bf58c676ed318dbd297dcfc 79 SMART SM01234 2 69 1.6E-45 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor UP17_22145 595eb1f99bf58c676ed318dbd297dcfc 79 Pfam PF01809 Haemolytic domain 3 69 2.0E-30 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor UP17_22145 595eb1f99bf58c676ed318dbd297dcfc 79 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 25.196 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor UP17_20070 3bb342da78c3659efe129d16173affb2 169 SUPERFAMILY SSF48403 11 162 2.95E-29 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily UP17_20070 3bb342da78c3659efe129d16173affb2 169 Pfam PF12796 Ankyrin repeats (3 copies) 43 134 8.2E-19 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain UP17_20070 3bb342da78c3659efe129d16173affb2 169 Gene3D G3DSA:1.25.40.20 2 169 1.2E-31 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily UP17_20070 3bb342da78c3659efe129d16173affb2 169 SMART SM00248 104 133 0.016 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 UP17_20070 3bb342da78c3659efe129d16173affb2 169 SMART SM00248 72 101 0.0047 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 UP17_20070 3bb342da78c3659efe129d16173affb2 169 SMART SM00248 34 67 2.2 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 UP17_03910 fe0d21581ba1c15d45970603cc7ae4bb 369 Gene3D G3DSA:3.40.1830.10 2 160 1.1E-11 T 11-10-2018 IPR035097 Peptidase M29, N-terminal UP17_03910 fe0d21581ba1c15d45970603cc7ae4bb 369 SUPERFAMILY SSF144052 1 356 1.44E-89 T 11-10-2018 UP17_03910 fe0d21581ba1c15d45970603cc7ae4bb 369 Pfam PF02073 Thermophilic metalloprotease (M29) 3 334 4.4E-50 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 UP17_20025 d9b8cb2430ab1673a73d06011af3b79b 606 Pfam PF10592 AIPR protein 244 567 1.6E-71 T 11-10-2018 IPR018891 Abortive bacteriophage infection, resistance UP17_13375 0977ebe8f879908085910fb1d1a8df69 410 Pfam PF01548 Transposase 9 155 2.6E-27 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 UP17_13375 0977ebe8f879908085910fb1d1a8df69 410 Pfam PF02371 Transposase IS116/IS110/IS902 family 254 335 3.9E-20 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 UP17_23895 4c93af7e412ec9961850e358dda4bd97 588 SUPERFAMILY SSF53649 234 540 4.91E-53 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 UP17_23895 4c93af7e412ec9961850e358dda4bd97 588 Gene3D G3DSA:3.40.720.10 228 530 6.6E-67 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 UP17_23895 4c93af7e412ec9961850e358dda4bd97 588 PIRSF PIRSF005091 1 588 2.5E-123 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like UP17_23895 4c93af7e412ec9961850e358dda4bd97 588 Pfam PF00884 Sulfatase 235 523 5.0E-28 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 UP17_02555 eadee64628058766c2ab3456f55b1ffc 488 PIRSF PIRSF026631 1 488 5.8E-96 T 11-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 UP17_02555 eadee64628058766c2ab3456f55b1ffc 488 Pfam PF03703 Bacterial PH domain 256 330 8.1E-12 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_02555 eadee64628058766c2ab3456f55b1ffc 488 Pfam PF03703 Bacterial PH domain 65 142 1.3E-13 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_02555 eadee64628058766c2ab3456f55b1ffc 488 Pfam PF03703 Bacterial PH domain 399 478 4.9E-9 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_15325 a0f66a50c3c273f8e0bfdebe05192143 198 Pfam PF07187 Protein of unknown function (DUF1405) 24 181 4.6E-58 T 11-10-2018 IPR009845 Protein of unknown function DUF1405 UP17_08490 26345e00ace7f88ddf59a21da1e76b33 612 Pfam PF02687 FtsX-like permease family 78 171 6.1E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 UP17_08490 26345e00ace7f88ddf59a21da1e76b33 612 PIRSF PIRSF018968 1 612 4.5E-90 T 11-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 UP17_02745 0c2d66c6c7573ca4ce19d6afbc22df5b 452 Pfam PF13751 Transposase DDE domain 324 441 8.9E-29 T 11-10-2018 IPR025668 Transposase DDE domain UP17_02745 0c2d66c6c7573ca4ce19d6afbc22df5b 452 Pfam PF05598 Transposase domain (DUF772) 52 127 3.6E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_01745 fb8156441bae5a2f83c1061a7f0e6a4a 170 SUPERFAMILY SSF55729 1 167 1.32E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_01745 fb8156441bae5a2f83c1061a7f0e6a4a 170 Pfam PF13420 Acetyltransferase (GNAT) domain 3 161 1.8E-16 T 11-10-2018 UP17_01745 fb8156441bae5a2f83c1061a7f0e6a4a 170 Gene3D G3DSA:3.40.630.30 1 170 7.5E-43 T 11-10-2018 UP17_21795 372a867658be0efa5b5acc444bbb6427 263 SUPERFAMILY SSF53850 37 260 1.7E-67 T 11-10-2018 UP17_21795 372a867658be0efa5b5acc444bbb6427 263 PIRSF PIRSF004846 1 263 2.6E-93 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 UP17_21795 372a867658be0efa5b5acc444bbb6427 263 Gene3D G3DSA:3.40.190.10 39 259 4.7E-80 T 11-10-2018 UP17_21795 372a867658be0efa5b5acc444bbb6427 263 Gene3D G3DSA:3.40.190.10 117 222 4.7E-80 T 11-10-2018 UP17_21795 372a867658be0efa5b5acc444bbb6427 263 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 43 258 6.8E-71 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 UP17_21795 372a867658be0efa5b5acc444bbb6427 263 Pfam PF13531 Bacterial extracellular solute-binding protein 38 260 3.9E-50 T 11-10-2018 UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 SUPERFAMILY SSF53850 87 290 6.63E-41 T 11-10-2018 UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 59 3.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 Pfam PF03466 LysR substrate binding domain 87 285 1.1E-43 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 Gene3D G3DSA:1.10.10.10 1 89 2.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 SUPERFAMILY SSF46785 3 109 8.62E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 Gene3D G3DSA:3.40.190.290 90 293 5.0E-43 T 11-10-2018 UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_12330 ec5336054efd4b705c2cbdea3795cac7 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 3.6E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_10295 0efefed9bbb7cad07715f4884496dde5 370 Pfam PF13343 Bacterial extracellular solute-binding protein 108 330 2.4E-30 T 11-10-2018 UP17_10295 0efefed9bbb7cad07715f4884496dde5 370 Gene3D G3DSA:3.40.190.10 81 333 5.4E-33 T 11-10-2018 UP17_10295 0efefed9bbb7cad07715f4884496dde5 370 SUPERFAMILY SSF53850 56 363 6.85E-47 T 11-10-2018 UP17_10295 0efefed9bbb7cad07715f4884496dde5 370 Gene3D G3DSA:3.40.190.10 157 337 5.4E-33 T 11-10-2018 UP17_14285 bc1647a6c4fe41aa7e9fcb16ccd2b72e 238 Gene3D G3DSA:3.40.1080.10 7 224 3.8E-68 T 11-10-2018 UP17_14285 bc1647a6c4fe41aa7e9fcb16ccd2b72e 238 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 15 222 1.4E-55 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 UP17_14285 bc1647a6c4fe41aa7e9fcb16ccd2b72e 238 Pfam PF01144 Coenzyme A transferase 16 220 6.9E-59 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_14285 bc1647a6c4fe41aa7e9fcb16ccd2b72e 238 SUPERFAMILY SSF100950 8 223 1.57E-65 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_14285 bc1647a6c4fe41aa7e9fcb16ccd2b72e 238 SMART SM00882 10 222 9.8E-61 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19230 4e055c6ecdeb026f4dc3aeca9cffc98f 226 Pfam PF03932 CutC family 2 197 3.1E-48 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 UP17_19230 4e055c6ecdeb026f4dc3aeca9cffc98f 226 Gene3D G3DSA:3.20.20.380 2 226 3.3E-71 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 UP17_19230 4e055c6ecdeb026f4dc3aeca9cffc98f 226 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 1 203 24.959 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 UP17_19230 4e055c6ecdeb026f4dc3aeca9cffc98f 226 SUPERFAMILY SSF110395 1 212 7.19E-57 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 UP17_12120 d501f38b6fefb31cb4e720bd750680c3 141 Gene3D G3DSA:3.30.300.20 2 134 1.3E-38 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta UP17_12120 d501f38b6fefb31cb4e720bd750680c3 141 Pfam PF02566 OsmC-like protein 33 130 1.2E-19 T 11-10-2018 IPR003718 OsmC/Ohr family UP17_12120 d501f38b6fefb31cb4e720bd750680c3 141 SUPERFAMILY SSF82784 1 133 5.5E-40 T 11-10-2018 IPR036102 OsmC/Ohr superfamily UP17_23865 291039288a454906fa6e5a34b7049b47 512 Gene3D G3DSA:3.90.550.10 2 299 3.0E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_23865 291039288a454906fa6e5a34b7049b47 512 SUPERFAMILY SSF53448 37 248 4.03E-42 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_23865 291039288a454906fa6e5a34b7049b47 512 Pfam PF00535 Glycosyl transferase family 2 39 164 1.6E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 UP17_14610 67942f9046989655424d04b5e74a3df9 410 SMART SM00422 1 68 0.0029 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_14610 67942f9046989655424d04b5e74a3df9 410 SUPERFAMILY SSF46955 1 113 8.79E-14 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily UP17_14610 67942f9046989655424d04b5e74a3df9 410 Gene3D G3DSA:1.10.1660.10 1 131 9.5E-17 T 11-10-2018 UP17_14610 67942f9046989655424d04b5e74a3df9 410 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.8E-9 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 UP17_16430 e9f2bad86bd255917fd8714042c40e97 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 55 1.5E-21 T 11-10-2018 IPR024490 Protein of unknown function DUF2759 UP17_16430 e9f2bad86bd255917fd8714042c40e97 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 57 4.0E-12 T 11-10-2018 IPR024490 Protein of unknown function DUF2759 UP17_16920 9c758b4e5ca1361241f92b79c260cfff 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 293 7.4E-67 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme UP17_16920 9c758b4e5ca1361241f92b79c260cfff 308 Gene3D G3DSA:3.40.50.1100 10 300 2.8E-117 T 11-10-2018 UP17_16920 9c758b4e5ca1361241f92b79c260cfff 308 Gene3D G3DSA:3.40.50.1100 45 146 2.8E-117 T 11-10-2018 UP17_16920 9c758b4e5ca1361241f92b79c260cfff 308 SUPERFAMILY SSF53686 1 302 1.03E-93 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme UP17_16920 9c758b4e5ca1361241f92b79c260cfff 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 304 5.4E-104 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 UP17_16920 9c758b4e5ca1361241f92b79c260cfff 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 UP17_24030 47c1f67f60c14f6df4ff29796d8591de 84 ProDom PD053619 EPUA PRECURSOR SIGNAL PEPTIDE YFDG EXTRACELLULAR OB2955 BH3736 GBS0884 SMU.1524C 24 78 4.0E-12 T 11-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA UP17_24030 47c1f67f60c14f6df4ff29796d8591de 84 Pfam PF11772 DNA-directed RNA polymerase subunit beta 37 82 3.3E-17 T 11-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA UP17_23985 964a566a0922c19e5210fd990d50a7b3 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 4.6E-43 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_23985 964a566a0922c19e5210fd990d50a7b3 334 SUPERFAMILY SSF161098 90 317 5.56E-20 T 11-10-2018 IPR035906 MetI-like superfamily UP17_23985 964a566a0922c19e5210fd990d50a7b3 334 Gene3D G3DSA:1.10.3720.10 91 328 6.8E-24 T 11-10-2018 IPR035906 MetI-like superfamily UP17_25090 2dd163e427a7f37b857284e96a9f7473 144 Pfam PF14106 Domain of unknown function (DUF4279) 7 131 3.6E-34 T 11-10-2018 IPR025459 Protein of unknown function DUF4279 UP17_01010 324e54abbd9ba1436c68b2985baf138e 286 Pfam PF02517 CAAX protease self-immunity 125 209 4.6E-16 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 UP17_17030 5372cadb532fd23966af3a88bd4b400d 152 Pfam PF05239 PRC-barrel domain 5 41 7.9E-8 T 11-10-2018 IPR027275 PRC-barrel domain UP17_17030 5372cadb532fd23966af3a88bd4b400d 152 Pfam PF05239 PRC-barrel domain 87 147 1.3E-4 T 11-10-2018 IPR027275 PRC-barrel domain UP17_17030 5372cadb532fd23966af3a88bd4b400d 152 SUPERFAMILY SSF50346 3 67 1.07E-9 T 11-10-2018 IPR011033 PRC-barrel-like superfamily UP17_17030 5372cadb532fd23966af3a88bd4b400d 152 Gene3D G3DSA:2.30.30.240 1 59 3.8E-6 T 11-10-2018 UP17_22395 6ba2fd78ed6e511fd668c1eb0659e485 406 Pfam PF13556 PucR C-terminal helix-turn-helix domain 343 400 6.2E-19 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain UP17_22395 6ba2fd78ed6e511fd668c1eb0659e485 406 Gene3D G3DSA:1.10.10.2840 273 405 2.1E-17 T 11-10-2018 UP17_14640 fe9a17899146c92221989927ea7c0a70 235 Gene3D G3DSA:3.40.50.12740 2 202 1.9E-35 T 11-10-2018 UP17_14640 fe9a17899146c92221989927ea7c0a70 235 SMART SM00448 2 115 1.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_14640 fe9a17899146c92221989927ea7c0a70 235 Pfam PF00072 Response regulator receiver domain 4 115 4.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 UP17_14640 fe9a17899146c92221989927ea7c0a70 235 SUPERFAMILY SSF46785 170 212 2.46E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_14640 fe9a17899146c92221989927ea7c0a70 235 SUPERFAMILY SSF52172 1 134 6.97E-38 T 11-10-2018 IPR011006 CheY-like superfamily UP17_14640 fe9a17899146c92221989927ea7c0a70 235 PIRSF PIRSF006171 1 227 1.5E-80 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 UP17_17400 5e7cc00ef480044a6a43b8064e2a7b13 101 Pfam PF13797 Post-transcriptional regulator 9 88 4.4E-26 T 11-10-2018 IPR025716 Post-transcriptional regulator UP17_14980 dba344136394f11705eb29242fcc2c38 148 Pfam PF17370 Family of unknown function (DUF5392) 5 141 6.2E-44 T 11-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane UP17_14980 dba344136394f11705eb29242fcc2c38 148 ProDom PD087515 YWNF MEMBRANE SYNTHASE BH1886 BETA-KETOACYL TRANSMEMBRANE 4 141 7.0E-16 T 11-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane UP17_04735 ee49c6a55e0fdc7fe1b4d2d9d68d0f8d 471 Pfam PF04293 SpoVR like protein 5 410 2.0E-163 T 11-10-2018 IPR007390 Sporulation stage V, protein R UP17_01400 b4f30d3a99d8d3e1dbd32a51f0dc3635 133 Gene3D G3DSA:3.30.565.10 6 131 5.0E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01400 b4f30d3a99d8d3e1dbd32a51f0dc3635 133 SUPERFAMILY SSF55874 21 128 2.56E-15 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily UP17_01400 b4f30d3a99d8d3e1dbd32a51f0dc3635 133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 128 1.9E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 215 8.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 49 66 8.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 135 8.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 234 8.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 186 8.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 251 271 8.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 184 6.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 215 6.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 6.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 183 211 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 SUPERFAMILY SSF51735 46 289 1.44E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 57 286 6.1E-64 T 11-10-2018 UP17_05810 8426e78ea7e144f72f16b8ab78569f94 291 Gene3D G3DSA:3.40.50.720 2 288 1.2E-93 T 11-10-2018 UP17_13040 be6967e763333aca38977628d097c49d 84 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 80 2.0E-20 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 UP17_13040 be6967e763333aca38977628d097c49d 84 Gene3D G3DSA:1.10.8.910 25 84 1.3E-11 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily UP17_13040 be6967e763333aca38977628d097c49d 84 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 33 42 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_11790 af867c07196cb9617d5f9eb16850794c 257 Gene3D G3DSA:3.30.420.10 92 246 3.3E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 UP17_11790 af867c07196cb9617d5f9eb16850794c 257 Pfam PF00665 Integrase core domain 96 209 3.9E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_11790 af867c07196cb9617d5f9eb16850794c 257 SUPERFAMILY SSF53098 90 253 2.73E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily UP17_11790 af867c07196cb9617d5f9eb16850794c 257 Pfam PF13276 HTH-like domain 12 73 9.0E-13 T 11-10-2018 IPR025948 HTH-like domain UP17_18850 f9f0b73717ede88d14a07d5963a09464 379 SUPERFAMILY SSF55797 253 377 4.19E-20 T 11-10-2018 IPR035940 CAP superfamily UP17_18850 f9f0b73717ede88d14a07d5963a09464 379 Gene3D G3DSA:3.40.33.10 68 379 4.1E-71 T 11-10-2018 IPR035940 CAP superfamily UP17_18850 f9f0b73717ede88d14a07d5963a09464 379 Pfam PF00188 Cysteine-rich secretory protein family 260 369 9.4E-12 T 11-10-2018 IPR014044 CAP domain UP17_18850 f9f0b73717ede88d14a07d5963a09464 379 Pfam PF14504 CAP-associated N-terminal 106 243 1.6E-38 T 11-10-2018 IPR029410 CAP-associated domain UP17_19685 0cf0c32c1a39f99e246102c306ee3bd9 170 Pfam PF13302 Acetyltransferase (GNAT) domain 10 145 1.6E-20 T 11-10-2018 IPR000182 GNAT domain UP17_19685 0cf0c32c1a39f99e246102c306ee3bd9 170 SUPERFAMILY SSF55729 9 149 9.07E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_19685 0cf0c32c1a39f99e246102c306ee3bd9 170 Gene3D G3DSA:3.40.630.30 3 164 7.2E-24 T 11-10-2018 UP17_02910 9435b3355a9ef1fe1553a26319076c82 59 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 58 2.9E-26 T 11-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 UP17_02910 9435b3355a9ef1fe1553a26319076c82 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 8.9E-26 T 11-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 UP17_02910 9435b3355a9ef1fe1553a26319076c82 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 58 2.0E-18 T 11-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 UP17_02910 9435b3355a9ef1fe1553a26319076c82 59 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 59 18.367 T 11-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 UP17_19665 bbca9ccc46d0522a89ce8d57fea6d333 282 SUPERFAMILY SSF55729 125 279 1.73E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_19665 bbca9ccc46d0522a89ce8d57fea6d333 282 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 15 279 1.8E-86 T 11-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 UP17_19665 bbca9ccc46d0522a89ce8d57fea6d333 282 Pfam PF13527 Acetyltransferase (GNAT) domain 132 255 5.2E-6 T 11-10-2018 UP17_19665 bbca9ccc46d0522a89ce8d57fea6d333 282 Gene3D G3DSA:3.40.630.30 128 281 7.3E-14 T 11-10-2018 UP17_06790 7a83388446639e24701b367e006e3005 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.9E-25 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_06790 7a83388446639e24701b367e006e3005 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.9E-25 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_06790 7a83388446639e24701b367e006e3005 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.9E-25 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_06790 7a83388446639e24701b367e006e3005 88 Gene3D G3DSA:3.30.1340.10 1 88 2.2E-36 T 11-10-2018 IPR035895 HPr-like superfamily UP17_06790 7a83388446639e24701b367e006e3005 88 Pfam PF00381 PTS HPr component phosphorylation site 2 82 3.8E-31 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_06790 7a83388446639e24701b367e006e3005 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site UP17_06790 7a83388446639e24701b367e006e3005 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 9.8E-33 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like UP17_06790 7a83388446639e24701b367e006e3005 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site UP17_06790 7a83388446639e24701b367e006e3005 88 SUPERFAMILY SSF55594 1 83 1.57E-28 T 11-10-2018 IPR035895 HPr-like superfamily UP17_00355 41ceaf59cd09fa66ce8a75da819389d9 128 Pfam PF04977 Septum formation initiator 47 122 7.4E-17 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC UP17_25120 3ec8c32d24f9c6a327943c9683c20c01 66 Gene3D G3DSA:1.10.260.40 1 65 2.4E-26 T 11-10-2018 UP17_25120 3ec8c32d24f9c6a327943c9683c20c01 66 SUPERFAMILY SSF47413 2 64 1.41E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_25120 3ec8c32d24f9c6a327943c9683c20c01 66 SMART SM00530 4 59 1.4E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_25120 3ec8c32d24f9c6a327943c9683c20c01 66 Pfam PF01381 Helix-turn-helix 5 59 2.9E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_13655 29e4da05337d916ea047eff4cb8ee204 133 Pfam PF06271 RDD family 6 125 1.6E-19 T 11-10-2018 IPR010432 RDD UP17_01315 9dd4480ea1d1b18408bba7bccb093d9c 420 Gene3D G3DSA:2.40.50.100 63 233 3.8E-22 T 11-10-2018 UP17_01315 9dd4480ea1d1b18408bba7bccb093d9c 420 Gene3D G3DSA:2.40.420.20 48 373 3.8E-22 T 11-10-2018 UP17_01315 9dd4480ea1d1b18408bba7bccb093d9c 420 Gene3D G3DSA:2.40.30.170 52 316 3.8E-22 T 11-10-2018 UP17_01315 9dd4480ea1d1b18408bba7bccb093d9c 420 Gene3D G3DSA:1.10.287.470 98 205 3.8E-22 T 11-10-2018 UP17_16215 f5442c2c679c0baf4397baedfdb6fc2d 485 Pfam PF02347 Glycine cleavage system P-protein 35 305 3.0E-12 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 UP17_16215 f5442c2c679c0baf4397baedfdb6fc2d 485 SUPERFAMILY SSF53383 30 483 2.95E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase UP17_16215 f5442c2c679c0baf4397baedfdb6fc2d 485 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 59.555 T 11-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 UP17_16215 f5442c2c679c0baf4397baedfdb6fc2d 485 Gene3D G3DSA:3.40.640.10 86 326 1.2E-59 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 UP17_16215 f5442c2c679c0baf4397baedfdb6fc2d 485 Gene3D G3DSA:3.90.1150.10 338 470 4.0E-48 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 UP17_11120 526c6778a2ee4591bdcc47744fc2e141 518 SUPERFAMILY SSF52096 220 498 3.13E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_11120 526c6778a2ee4591bdcc47744fc2e141 518 Gene3D G3DSA:3.90.226.10 5 254 1.6E-78 T 11-10-2018 UP17_11120 526c6778a2ee4591bdcc47744fc2e141 518 Gene3D G3DSA:3.90.226.10 255 517 4.3E-83 T 11-10-2018 UP17_11120 526c6778a2ee4591bdcc47744fc2e141 518 SUPERFAMILY SSF52096 9 256 2.85E-67 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily UP17_11120 526c6778a2ee4591bdcc47744fc2e141 518 Pfam PF01039 Carboxyl transferase domain 35 515 7.4E-161 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 UP17_05445 9ff49ada369df0b38e8d20897b806aaa 149 Pfam PF12867 DinB superfamily 7 138 1.1E-16 T 11-10-2018 IPR024775 DinB-like domain UP17_05445 9ff49ada369df0b38e8d20897b806aaa 149 Gene3D G3DSA:1.20.120.450 2 147 6.0E-13 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_05445 9ff49ada369df0b38e8d20897b806aaa 149 SUPERFAMILY SSF109854 6 142 1.83E-21 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes UP17_01160 4d9a5b93ac7054e1049f05f3dca3bb1b 240 Pfam PF13580 SIS domain 4 138 1.8E-40 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 UP17_01160 4d9a5b93ac7054e1049f05f3dca3bb1b 240 Gene3D G3DSA:3.40.50.10490 1 236 1.2E-80 T 11-10-2018 UP17_01160 4d9a5b93ac7054e1049f05f3dca3bb1b 240 SUPERFAMILY SSF53697 1 201 9.51E-22 T 11-10-2018 UP17_23015 5250281f7d02c013933d2d1cf0dc7211 108 SUPERFAMILY SSF52833 2 104 5.0E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_23015 5250281f7d02c013933d2d1cf0dc7211 108 PIRSF PIRSF010603 1 106 4.3E-45 T 11-10-2018 IPR009190 Protein of unknown function DUF1462 UP17_23015 5250281f7d02c013933d2d1cf0dc7211 108 Gene3D G3DSA:3.40.30.30 1 104 4.0E-42 T 11-10-2018 IPR038218 YuzD-like superfamily UP17_23015 5250281f7d02c013933d2d1cf0dc7211 108 Pfam PF07315 Protein of unknown function (DUF1462) 9 100 7.9E-42 T 11-10-2018 IPR009190 Protein of unknown function DUF1462 UP17_23630 a588560ce2d0a48bec7fc4e75f39fd71 76 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 3 72 2.9E-32 T 11-10-2018 IPR019242 Protein of unknown function DUF2198 UP17_24090 38768fe3b25add199fdf6e16eaa585e9 507 Pfam PF00361 Proton-conducting membrane transporter 139 437 5.2E-67 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24090 38768fe3b25add199fdf6e16eaa585e9 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 254 278 5.7E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24090 38768fe3b25add199fdf6e16eaa585e9 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 5.7E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24090 38768fe3b25add199fdf6e16eaa585e9 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 175 199 5.7E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24090 38768fe3b25add199fdf6e16eaa585e9 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 342 361 5.7E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24090 38768fe3b25add199fdf6e16eaa585e9 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 5.7E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_24090 38768fe3b25add199fdf6e16eaa585e9 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 501 4.4E-135 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_16415 ad95a12d72caadb1689d8c89e405a23c 80 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 9.6E-36 T 11-10-2018 IPR020254 Protein of unknown function DUF2626 UP17_16415 ad95a12d72caadb1689d8c89e405a23c 80 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 80 8.0E-29 T 11-10-2018 IPR020254 Protein of unknown function DUF2626 UP17_21975 6c03961a498f8faff21f7a89a7139249 157 Pfam PF07875 Coat F domain 79 136 2.4E-17 T 11-10-2018 IPR012851 Spore coat protein CotF-like UP17_00255 e4efc2c71ca5086afc6f8f841cdfd70f 292 PIRSF PIRSF011575 2 290 5.2E-112 T 11-10-2018 IPR008764 Peptidase U57, YabG UP17_00255 e4efc2c71ca5086afc6f8f841cdfd70f 292 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 286 5.6E-130 T 11-10-2018 IPR008764 Peptidase U57, YabG UP17_00255 e4efc2c71ca5086afc6f8f841cdfd70f 292 Pfam PF05582 YabG peptidase U57 5 285 3.8E-111 T 11-10-2018 IPR008764 Peptidase U57, YabG UP17_00255 e4efc2c71ca5086afc6f8f841cdfd70f 292 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 3 280 9.0E-109 T 11-10-2018 IPR008764 Peptidase U57, YabG UP17_20240 208cda294d787ce2433e3cde1511fcbe 300 SUPERFAMILY SSF81342 25 146 4.45E-6 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 UP17_20240 208cda294d787ce2433e3cde1511fcbe 300 Pfam PF14358 Domain of unknown function (DUF4405) 77 135 2.3E-10 T 11-10-2018 IPR025517 Domain of unknown function DUF4405 UP17_10440 072e66adae65d8e0e2f137b19694f095 373 Gene3D G3DSA:3.30.420.180 243 372 2.4E-33 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 UP17_10440 072e66adae65d8e0e2f137b19694f095 373 SUPERFAMILY SSF159664 245 372 8.89E-34 T 11-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 UP17_10440 072e66adae65d8e0e2f137b19694f095 373 Pfam PF11761 Cobalamin biosynthesis central region 155 249 1.7E-12 T 11-10-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 UP17_10440 072e66adae65d8e0e2f137b19694f095 373 Pfam PF01890 Cobalamin synthesis G C-terminus 252 368 7.3E-29 T 11-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 UP17_10440 072e66adae65d8e0e2f137b19694f095 373 Gene3D G3DSA:3.40.50.11220 12 144 4.8E-32 T 11-10-2018 UP17_10440 072e66adae65d8e0e2f137b19694f095 373 SUPERFAMILY SSF159672 17 259 9.81E-58 T 11-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 UP17_10440 072e66adae65d8e0e2f137b19694f095 373 Pfam PF11760 Cobalamin synthesis G N-terminal 70 149 2.1E-34 T 11-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 UP17_06425 8a102f81577e21d5a9a858c32e7a28de 401 Gene3D G3DSA:1.20.1250.20 10 401 2.9E-92 T 11-10-2018 UP17_06425 8a102f81577e21d5a9a858c32e7a28de 401 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_06425 8a102f81577e21d5a9a858c32e7a28de 401 Pfam PF07690 Major Facilitator Superfamily 21 268 3.5E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_06425 8a102f81577e21d5a9a858c32e7a28de 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 272 287 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_06425 8a102f81577e21d5a9a858c32e7a28de 401 SUPERFAMILY SSF103473 9 397 8.37E-88 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 Gene3D G3DSA:3.40.1190.20 2 269 8.3E-94 T 11-10-2018 IPR029056 Ribokinase-like UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 11 264 32.193 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 30 51 1.1E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 61 69 1.1E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 17 24 1.1E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 87 104 1.1E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 118 132 1.1E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 162 179 1.1E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 11 257 6.4E-85 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 Pfam PF02110 Hydroxyethylthiazole kinase family 11 257 4.6E-80 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 SUPERFAMILY SSF53613 11 265 1.96E-53 T 11-10-2018 IPR029056 Ribokinase-like UP17_06435 cd9953e11c4aa7a275ed79981a7af4e3 271 PIRSF PIRSF000513 4 268 7.6E-87 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_19775 9645489d6ec0a0a10616029226069408 117 Pfam PF13564 DoxX-like family 7 107 1.2E-22 T 11-10-2018 IPR032808 DoxX family UP17_13465 c1423952c0e06eb374d5747999cdb4dc 330 Pfam PF00561 alpha/beta hydrolase fold 55 306 6.9E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 UP17_13465 c1423952c0e06eb374d5747999cdb4dc 330 SUPERFAMILY SSF53474 28 306 3.74E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_13465 c1423952c0e06eb374d5747999cdb4dc 330 Gene3D G3DSA:3.40.50.1820 56 312 8.8E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_20730 6017f4efd8ad53401b2c40075b2d4773 231 Pfam PF13731 WxL domain surface cell wall-binding 30 230 2.0E-52 T 11-10-2018 IPR027994 WxL domain UP17_10155 3c197311affa79ca58a9afbfa5c1ebb1 351 SUPERFAMILY SSF51197 28 314 3.94E-53 T 11-10-2018 UP17_10155 3c197311affa79ca58a9afbfa5c1ebb1 351 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 53 307 1.3E-30 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 UP17_10155 3c197311affa79ca58a9afbfa5c1ebb1 351 Gene3D G3DSA:3.60.130.10 52 317 1.9E-43 T 11-10-2018 UP17_22900 ac4f6af9209eae0e263d0f4d20215584 158 PIRSF PIRSF019239 1 158 3.1E-50 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 UP17_22900 ac4f6af9209eae0e263d0f4d20215584 158 Pfam PF01899 Na+/H+ ion antiporter subunit 8 156 6.0E-45 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 UP17_04620 3f29caf4876045e3a6919ad866e916bb 273 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 23 265 1.0E-68 T 11-10-2018 UP17_04620 3f29caf4876045e3a6919ad866e916bb 273 Pfam PF12787 EcsC protein family 11 262 6.0E-75 T 11-10-2018 IPR024787 EcsC protein UP17_02730 2591e9e45c68bf372a81b25251814ad5 74 Pfam PF06569 Protein of unknown function (DUF1128) 3 72 1.9E-30 T 11-10-2018 IPR009507 Protein of unknown function UPF0435 UP17_02730 2591e9e45c68bf372a81b25251814ad5 74 Hamap MF_00829 UPF0435 protein . 6 73 18.605 T 11-10-2018 IPR009507 Protein of unknown function UPF0435 UP17_04260 084e25c862a0a5c7377be22cdad62daf 184 Gene3D G3DSA:1.10.10.10 118 181 1.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_04260 084e25c862a0a5c7377be22cdad62daf 184 SUPERFAMILY SSF88946 6 111 3.73E-20 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 UP17_04260 084e25c862a0a5c7377be22cdad62daf 184 Pfam PF08281 Sigma-70, region 4 124 175 2.1E-9 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 UP17_04260 084e25c862a0a5c7377be22cdad62daf 184 Gene3D G3DSA:1.10.1740.10 6 89 8.5E-22 T 11-10-2018 UP17_04260 084e25c862a0a5c7377be22cdad62daf 184 Pfam PF04542 Sigma-70 region 2 24 91 5.4E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 UP17_04260 084e25c862a0a5c7377be22cdad62daf 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 179 1.1E-27 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 UP17_04260 084e25c862a0a5c7377be22cdad62daf 184 SUPERFAMILY SSF88659 128 180 1.85E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like UP17_04230 600298d3e491d4dc3068128a945f60cd 395 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 381 4.4E-89 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_04230 600298d3e491d4dc3068128a945f60cd 395 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 216 379 8.4E-39 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_04230 600298d3e491d4dc3068128a945f60cd 395 Gene3D G3DSA:3.30.300.210 230 383 3.2E-37 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_14890 2ce0ef035e6ca213ebf33f5fd1336ebe 96 Pfam PF11256 Protein of unknown function (DUF3055) 8 84 1.6E-15 T 11-10-2018 IPR021415 Protein of unknown function DUF3055 UP17_21720 ef949c3c06806e6d708bf1d7927c589f 126 Gene3D G3DSA:1.10.10.10 6 124 1.7E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_21720 ef949c3c06806e6d708bf1d7927c589f 126 SMART SM00345 13 72 7.4E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_21720 ef949c3c06806e6d708bf1d7927c589f 126 SUPERFAMILY SSF46785 2 83 1.02E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_21720 ef949c3c06806e6d708bf1d7927c589f 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 66 1.5E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_07290 2babf5984090a367228cbf8bd6bebf38 452 Pfam PF13751 Transposase DDE domain 324 441 2.1E-29 T 11-10-2018 IPR025668 Transposase DDE domain UP17_07290 2babf5984090a367228cbf8bd6bebf38 452 Pfam PF05598 Transposase domain (DUF772) 52 127 4.7E-22 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_06040 eeee580e8dee46b5aeb010d8f9e0b15d 216 SUPERFAMILY SSF53955 80 212 2.96E-48 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily UP17_06040 eeee580e8dee46b5aeb010d8f9e0b15d 216 Gene3D G3DSA:1.10.530.10 55 215 9.0E-53 T 11-10-2018 UP17_06040 eeee580e8dee46b5aeb010d8f9e0b15d 216 Pfam PF01464 Transglycosylase SLT domain 99 206 6.7E-32 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 UP17_06040 eeee580e8dee46b5aeb010d8f9e0b15d 216 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 116 144 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 UP17_13385 d6484f393847c84c086e036a6742669f 249 Pfam PF00106 short chain dehydrogenase 2 198 1.2E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13385 d6484f393847c84c086e036a6742669f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13385 d6484f393847c84c086e036a6742669f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13385 d6484f393847c84c086e036a6742669f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13385 d6484f393847c84c086e036a6742669f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_13385 d6484f393847c84c086e036a6742669f 249 Gene3D G3DSA:3.40.50.720 1 248 6.4E-47 T 11-10-2018 UP17_13385 d6484f393847c84c086e036a6742669f 249 SUPERFAMILY SSF51735 2 243 2.43E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_13385 d6484f393847c84c086e036a6742669f 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_20030 c66c0252a8bb538dc06c1b0bc0b33713 343 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 16 322 4.8E-53 T 11-10-2018 IPR025534 Putative PD-(D/E)XK family member (DUF4420) UP17_05250 8181b59e9a83f964d34af18adc2a4e60 131 SUPERFAMILY SSF69118 14 130 6.08E-19 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 UP17_05250 8181b59e9a83f964d34af18adc2a4e60 131 Gene3D G3DSA:1.20.1290.10 40 131 4.7E-6 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 UP17_17970 ca8232ab909e992718312ace3c19a543 130 Pfam PF11181 Heat induced stress protein YflT 6 107 3.5E-9 T 11-10-2018 IPR025889 General stress protein 17M-like domain UP17_15570 f3663ffade4ebc798b2aee0e94e54a6c 208 Pfam PF02517 CAAX protease self-immunity 100 180 7.5E-11 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 UP17_20960 f567dac3009b41e9776ebef66de06db3 149 Pfam PF00583 Acetyltransferase (GNAT) family 33 137 2.1E-15 T 11-10-2018 IPR000182 GNAT domain UP17_20960 f567dac3009b41e9776ebef66de06db3 149 SUPERFAMILY SSF55729 1 145 2.45E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_20960 f567dac3009b41e9776ebef66de06db3 149 Gene3D G3DSA:3.40.630.30 1 148 5.4E-42 T 11-10-2018 UP17_02960 8c46a7e29b41f40c8911287b294ef69b 248 SUPERFAMILY SSF56436 12 246 2.83E-52 T 11-10-2018 IPR016187 C-type lectin fold UP17_02960 8c46a7e29b41f40c8911287b294ef69b 248 Gene3D G3DSA:3.90.1580.10 28 246 3.1E-62 T 11-10-2018 UP17_02960 8c46a7e29b41f40c8911287b294ef69b 248 Pfam PF03781 Sulfatase-modifying factor enzyme 1 53 245 6.5E-38 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 UP17_14590 73f6dcaefe57b39df54531db16a226e1 93 SUPERFAMILY SSF51182 12 76 2.01E-8 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_14590 73f6dcaefe57b39df54531db16a226e1 93 Gene3D G3DSA:2.60.120.10 2 86 1.4E-13 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_14590 73f6dcaefe57b39df54531db16a226e1 93 Pfam PF05899 Protein of unknown function (DUF861) 13 84 1.1E-8 T 11-10-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 UP17_24590 1b0461aefd0adb3041e21eb4f212dea2 323 Pfam PF01497 Periplasmic binding protein 65 296 1.1E-43 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain UP17_24590 1b0461aefd0adb3041e21eb4f212dea2 323 SUPERFAMILY SSF53807 43 319 2.86E-69 T 11-10-2018 UP17_24590 1b0461aefd0adb3041e21eb4f212dea2 323 Gene3D G3DSA:3.40.50.1980 25 181 1.1E-38 T 11-10-2018 UP17_24590 1b0461aefd0adb3041e21eb4f212dea2 323 Gene3D G3DSA:3.40.50.1980 187 319 5.1E-42 T 11-10-2018 UP17_02905 38379eedc7941d903b7f912f23cd2b2c 394 Gene3D G3DSA:3.40.710.10 12 297 1.4E-84 T 11-10-2018 UP17_02905 38379eedc7941d903b7f912f23cd2b2c 394 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 22 251 7.7E-52 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 UP17_02905 38379eedc7941d903b7f912f23cd2b2c 394 SUPERFAMILY SSF56601 3 271 7.58E-60 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like UP17_02905 38379eedc7941d903b7f912f23cd2b2c 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 56 67 1.3E-8 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_02905 38379eedc7941d903b7f912f23cd2b2c 394 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 104 121 1.3E-8 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 UP17_23255 5c44e29d18f6eec54370e182232f8152 175 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 6 172 8.3E-45 T 11-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 UP17_23255 5c44e29d18f6eec54370e182232f8152 175 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 22 171 1.4E-24 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like UP17_01215 5b88acd5a909727b7c9186e4cd868405 428 Pfam PF04261 Dyp-type peroxidase family 66 417 1.5E-107 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 UP17_01215 5b88acd5a909727b7c9186e4cd868405 428 SUPERFAMILY SSF54909 61 422 2.86E-90 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_01215 5b88acd5a909727b7c9186e4cd868405 428 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 66 417 1.3E-93 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 UP17_01215 5b88acd5a909727b7c9186e4cd868405 428 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 15 427 8.7E-166 T 11-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 UP17_14525 54c8a66315217d7425d5aa479a898ec5 119 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 6 115 4.8E-38 T 11-10-2018 IPR018745 Domain of unknown function DUF2294 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 Pfam PF00313 'Cold-shock' DNA-binding domain 2 65 4.3E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 SMART SM00357 3 65 3.3E-27 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 PIRSF PIRSF002599 1 65 2.1E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 PRINTS PR00050 Cold shock protein signature 39 57 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 PRINTS PR00050 Cold shock protein signature 4 19 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 PRINTS PR00050 Cold shock protein signature 24 33 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 Gene3D G3DSA:2.40.50.140 1 65 2.4E-30 T 11-10-2018 UP17_05045 d32144fcb4a6376e1558d2ae947c2f56 65 SUPERFAMILY SSF50249 1 64 1.03E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold UP17_16150 f77f2e92b28ff874ee832be789b50590 310 SMART SM00382 135 279 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_16150 f77f2e92b28ff874ee832be789b50590 310 SUPERFAMILY SSF52540 35 259 1.69E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_16150 f77f2e92b28ff874ee832be789b50590 310 Gene3D G3DSA:3.40.50.300 119 282 3.8E-23 T 11-10-2018 UP17_16150 f77f2e92b28ff874ee832be789b50590 310 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 286 8.7E-116 T 11-10-2018 IPR014217 Sporulation stage III, protein AA UP17_10630 340a35ea19b87966f8f9d9141a519554 903 Gene3D G3DSA:3.30.499.20 4 375 5.5E-158 T 11-10-2018 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 SUPERFAMILY SSF52016 641 900 3.14E-83 T 11-10-2018 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 375 389 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 147 160 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 281 294 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 205 218 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 171 179 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 503 516 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 295 308 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 441 452 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 PRINTS PR00415 Aconitase family signature 219 234 1.2E-41 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 SUPERFAMILY SSF53732 5 636 2.49E-225 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 901 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 Gene3D G3DSA:1.10.1440.20 601 661 1.8E-21 T 11-10-2018 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 ProSitePatterns PS01244 Aconitase family signature 2. 503 516 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 Pfam PF00694 Aconitase C-terminal domain 702 829 5.2E-44 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 ProSitePatterns PS00450 Aconitase family signature 1. 437 453 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 Gene3D G3DSA:3.30.499.10 376 600 3.7E-103 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 Pfam PF00330 Aconitase family (aconitate hydratase) 76 572 1.7E-174 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 UP17_10630 340a35ea19b87966f8f9d9141a519554 903 Gene3D G3DSA:3.20.19.10 665 902 3.6E-100 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 UP17_15470 8e0bafd886b07ec40002c1e8ce4a6c2b 445 Gene3D G3DSA:1.20.1740.10 5 436 2.6E-73 T 11-10-2018 UP17_15470 8e0bafd886b07ec40002c1e8ce4a6c2b 445 Pfam PF00324 Amino acid permease 14 387 3.2E-38 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_15470 8e0bafd886b07ec40002c1e8ce4a6c2b 445 PIRSF PIRSF006060 1 435 1.5E-72 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_09755 aae6d2d4f4c401cc678cd7e1387237ad 345 Pfam PF03601 Conserved hypothetical protein 698 25 329 3.6E-79 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 UP17_23730 09641ff315c31a546dec5a61ff87f9f0 505 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 107 2.6E-21 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 UP17_23730 09641ff315c31a546dec5a61ff87f9f0 505 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 237 494 5.3E-49 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.7E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 SUPERFAMILY SSF51735 6 246 2.03E-69 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 1.2E-54 T 11-10-2018 UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_12980 3ef867c044b4a31db2381ff58b4f6f63 250 Gene3D G3DSA:3.40.50.720 2 249 4.9E-72 T 11-10-2018 UP17_07165 d2827989cad4a0a49c65a80a0443419c 80 Pfam PF14003 YlbE-like protein 15 73 2.5E-23 T 11-10-2018 IPR025613 YlbE-like protein UP17_05520 c6e1d264eda9d1b81bdadf39884f1c9a 232 Pfam PF06276 Ferric iron reductase FhuF-like transporter 53 191 1.5E-5 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain UP17_05520 c6e1d264eda9d1b81bdadf39884f1c9a 232 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 209 228 1.8E-5 T 11-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 UP17_03160 2c2a0106574d0d871751906cc1e92bc6 298 Pfam PF00892 EamA-like transporter family 7 145 3.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_03160 2c2a0106574d0d871751906cc1e92bc6 298 Pfam PF00892 EamA-like transporter family 156 284 8.0E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_03160 2c2a0106574d0d871751906cc1e92bc6 298 SUPERFAMILY SSF103481 190 285 7.59E-11 T 11-10-2018 UP17_03160 2c2a0106574d0d871751906cc1e92bc6 298 SUPERFAMILY SSF103481 50 148 2.88E-7 T 11-10-2018 UP17_20130 045f57f6dd8e98d9116dd052201771c8 71 Pfam PF13131 Protein of unknown function (DUF3951) 5 38 2.6E-8 T 11-10-2018 IPR025028 Protein of unknown function DUF3951 UP17_08150 e23575e4a498e45bd7e3a7410b95c735 300 Pfam PF13464 Domain of unknown function (DUF4115) 218 281 5.0E-8 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 UP17_08150 e23575e4a498e45bd7e3a7410b95c735 300 SMART SM00530 7 63 1.1E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_08150 e23575e4a498e45bd7e3a7410b95c735 300 SUPERFAMILY SSF47413 2 74 2.2E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_08150 e23575e4a498e45bd7e3a7410b95c735 300 Pfam PF13413 Helix-turn-helix domain 7 68 2.6E-22 T 11-10-2018 UP17_08150 e23575e4a498e45bd7e3a7410b95c735 300 Gene3D G3DSA:1.10.260.40 1 103 5.3E-31 T 11-10-2018 UP17_18310 19ae4ed6df5abd674ae254a8d07a6fbf 166 Gene3D G3DSA:3.40.30.10 1 165 3.4E-48 T 11-10-2018 UP17_18310 19ae4ed6df5abd674ae254a8d07a6fbf 166 SUPERFAMILY SSF52833 1 160 4.08E-45 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_18310 19ae4ed6df5abd674ae254a8d07a6fbf 166 Pfam PF08534 Redoxin 19 158 1.0E-24 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 UP17_18310 19ae4ed6df5abd674ae254a8d07a6fbf 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 UP17_18310 19ae4ed6df5abd674ae254a8d07a6fbf 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 37.848 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 UP17_13200 f31552322ddc3aa0a86d73b00ebf61d9 144 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 139 2.5E-39 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ UP17_23075 2ab8e7fcc4d9f3c79bc6cdc69d2211ba 91 PIRSF PIRSF012565 1 91 3.8E-49 T 11-10-2018 IPR009370 Protein of unknown function DUF1027 UP17_23075 2ab8e7fcc4d9f3c79bc6cdc69d2211ba 91 Gene3D G3DSA:3.50.4.20 1 91 4.4E-43 T 11-10-2018 IPR038141 YutD-like superfamily UP17_23075 2ab8e7fcc4d9f3c79bc6cdc69d2211ba 91 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 7.6E-39 T 11-10-2018 IPR009370 Protein of unknown function DUF1027 UP17_22460 7454fc865db65afd0e672f28720148c9 100 Pfam PF12840 Helix-turn-helix domain 5 77 1.1E-13 T 11-10-2018 UP17_22460 7454fc865db65afd0e672f28720148c9 100 SUPERFAMILY SSF46785 3 98 3.42E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_22460 7454fc865db65afd0e672f28720148c9 100 SMART SM00418 5 98 1.1E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_22460 7454fc865db65afd0e672f28720148c9 100 Gene3D G3DSA:1.10.10.10 1 100 2.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_13510 c9ca9962d5bf33218bab6a21e2a64efc 359 Pfam PF02898 Nitric oxide synthase, oxygenase domain 3 359 3.3E-170 T 11-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 UP17_13510 c9ca9962d5bf33218bab6a21e2a64efc 359 PIRSF PIRSF037219 1 359 4.4E-182 T 11-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 UP17_13510 c9ca9962d5bf33218bab6a21e2a64efc 359 Gene3D G3DSA:3.90.340.10 4 351 3.0E-152 T 11-10-2018 UP17_13510 c9ca9962d5bf33218bab6a21e2a64efc 359 SUPERFAMILY SSF56512 3 358 2.49E-167 T 11-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 UP17_13510 c9ca9962d5bf33218bab6a21e2a64efc 359 Gene3D G3DSA:3.90.440.10 80 189 3.0E-152 T 11-10-2018 UP17_13510 c9ca9962d5bf33218bab6a21e2a64efc 359 Gene3D G3DSA:3.90.1230.10 190 296 3.0E-152 T 11-10-2018 UP17_24885 231407b86350b7a3747ed76904c5419e 264 Pfam PF09648 YycH protein 31 249 9.3E-53 T 11-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 UP17_24885 231407b86350b7a3747ed76904c5419e 264 Gene3D G3DSA:3.10.450.660 47 251 5.8E-56 T 11-10-2018 UP17_24885 231407b86350b7a3747ed76904c5419e 264 Gene3D G3DSA:3.30.310.160 70 181 5.8E-56 T 11-10-2018 UP17_12580 bbf8285b784013f8505e6d452efa9402 791 SMART SM00631 52 322 5.8E-4 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_12580 bbf8285b784013f8505e6d452efa9402 791 SUPERFAMILY SSF53187 54 338 5.95E-40 T 11-10-2018 UP17_12580 bbf8285b784013f8505e6d452efa9402 791 Pfam PF00246 Zinc carboxypeptidase 62 240 6.1E-19 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_08780 5cc42174442764634a2811a38d2338e0 255 Pfam PF01061 ABC-2 type transporter 11 220 6.0E-21 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 UP17_08780 5cc42174442764634a2811a38d2338e0 255 PIRSF PIRSF006648 2 255 2.6E-60 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 UP17_21495 cb088eff4c79cefcb9ead6cd1b9b3489 206 Pfam PF04892 VanZ like family 71 189 5.0E-19 T 11-10-2018 IPR006976 VanZ-like UP17_17190 2d324981e3ec4d3e452b1abfda1659cf 365 Pfam PF04230 Polysaccharide pyruvyl transferase 13 301 3.9E-28 T 11-10-2018 IPR007345 Polysaccharide pyruvyl transferase UP17_11245 97c6b9cf9ad593df22240b94ff56a136 374 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 201 355 1.1E-35 T 11-10-2018 IPR017516 AbrB duplication UP17_11245 97c6b9cf9ad593df22240b94ff56a136 374 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 17 169 1.9E-38 T 11-10-2018 IPR017516 AbrB duplication UP17_11245 97c6b9cf9ad593df22240b94ff56a136 374 PIRSF PIRSF038991 4 365 7.4E-93 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 UP17_11245 97c6b9cf9ad593df22240b94ff56a136 374 Pfam PF05145 Transition state regulatory protein AbrB 38 356 7.6E-85 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 UP17_11240 0c91c11a8fd133ceba943baaab6413bb 440 Pfam PF03600 Citrate transporter 14 385 4.2E-47 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 UP17_11240 0c91c11a8fd133ceba943baaab6413bb 440 TIGRFAM TIGR00784 citMHS: citrate transporter 3 439 1.4E-202 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 UP17_14320 25013c02514302125a5de7e74c43b066 246 Pfam PF14344 Domain of unknown function (DUF4397) 58 170 1.4E-29 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 UP17_14320 25013c02514302125a5de7e74c43b066 246 Pfam PF14344 Domain of unknown function (DUF4397) 154 235 3.6E-8 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 UP17_23785 6ec493bfdf2bdbaf79199917052f89e1 230 Gene3D G3DSA:3.40.50.2020 76 230 3.7E-20 T 11-10-2018 UP17_23785 6ec493bfdf2bdbaf79199917052f89e1 230 SUPERFAMILY SSF53271 67 229 1.84E-26 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like UP17_23785 6ec493bfdf2bdbaf79199917052f89e1 230 Pfam PF00156 Phosphoribosyl transferase domain 180 229 7.9E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 UP17_21025 d3f8450bf7738c4b658b4db5aabc1648 249 Pfam PF12746 GNAT acetyltransferase 12 246 1.1E-59 T 11-10-2018 IPR027365 GNAT acetyltransferase YdfB-like UP17_21025 d3f8450bf7738c4b658b4db5aabc1648 249 SUPERFAMILY SSF55729 135 238 3.48E-12 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_21025 d3f8450bf7738c4b658b4db5aabc1648 249 Gene3D G3DSA:3.40.630.30 104 237 7.9E-40 T 11-10-2018 UP17_14705 38b1f77f302a819d8892cafb69d06880 206 Gene3D G3DSA:2.60.20.10 115 206 5.4E-7 T 11-10-2018 UP17_10170 8a93c4202af7a09c35fe2cbfdd6ea940 315 Gene3D G3DSA:3.40.50.1820 2 307 1.9E-90 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_10170 8a93c4202af7a09c35fe2cbfdd6ea940 315 Pfam PF07859 alpha/beta hydrolase fold 79 284 6.4E-74 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 UP17_10170 8a93c4202af7a09c35fe2cbfdd6ea940 315 SUPERFAMILY SSF53474 13 288 2.32E-74 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_24785 9f6095708aa9896ab179367626d5f877 300 SUPERFAMILY SSF46785 2 111 1.45E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_24785 9f6095708aa9896ab179367626d5f877 300 Gene3D G3DSA:1.10.10.10 1 85 2.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_24785 9f6095708aa9896ab179367626d5f877 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_24785 9f6095708aa9896ab179367626d5f877 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_24785 9f6095708aa9896ab179367626d5f877 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_24785 9f6095708aa9896ab179367626d5f877 300 Gene3D G3DSA:3.40.190.290 90 299 1.1E-50 T 11-10-2018 UP17_24785 9f6095708aa9896ab179367626d5f877 300 SUPERFAMILY SSF53850 88 295 1.17E-42 T 11-10-2018 UP17_24785 9f6095708aa9896ab179367626d5f877 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 7.5E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 UP17_24785 9f6095708aa9896ab179367626d5f877 300 Pfam PF03466 LysR substrate binding domain 89 293 1.9E-45 T 11-10-2018 IPR005119 LysR, substrate-binding UP17_24460 fb9115d9a0b6454aa914f69da8f72390 339 SUPERFAMILY SSF69572 3 332 3.79E-83 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 UP17_24460 fb9115d9a0b6454aa914f69da8f72390 339 Gene3D G3DSA:3.40.50.720 2 250 4.5E-72 T 11-10-2018 UP17_24460 fb9115d9a0b6454aa914f69da8f72390 339 Pfam PF00899 ThiF family 5 241 1.5E-58 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 UP17_23280 32bebab6c879f5cd20ef1f6053f66ab3 315 SUPERFAMILY SSF53807 40 302 6.28E-70 T 11-10-2018 UP17_23280 32bebab6c879f5cd20ef1f6053f66ab3 315 Gene3D G3DSA:3.40.50.12260 187 288 3.2E-102 T 11-10-2018 UP17_23280 32bebab6c879f5cd20ef1f6053f66ab3 315 Gene3D G3DSA:3.40.50.12250 44 296 3.2E-102 T 11-10-2018 UP17_23280 32bebab6c879f5cd20ef1f6053f66ab3 315 Pfam PF01497 Periplasmic binding protein 60 291 1.8E-37 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain UP17_04455 8ae5de3cce7740a5bc892b4bf65bb9ca 631 Pfam PF08298 PrkA AAA domain 22 370 6.5E-148 T 11-10-2018 IPR013153 PrkA AAA domain UP17_04455 8ae5de3cce7740a5bc892b4bf65bb9ca 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 4.1E-93 T 11-10-2018 IPR010650 PrkA C-terminal domain UP17_04455 8ae5de3cce7740a5bc892b4bf65bb9ca 631 SUPERFAMILY SSF52540 68 459 1.48E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_04455 8ae5de3cce7740a5bc892b4bf65bb9ca 631 SMART SM00763 21 371 2.0E-191 T 11-10-2018 IPR013153 PrkA AAA domain UP17_04455 8ae5de3cce7740a5bc892b4bf65bb9ca 631 PIRSF PIRSF000549 1 631 2.0E-259 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 UP17_05365 8463d8337772f423897452b797eea8d5 294 Gene3D G3DSA:1.10.10.2840 172 294 3.3E-17 T 11-10-2018 UP17_05365 8463d8337772f423897452b797eea8d5 294 SUPERFAMILY SSF46689 183 269 4.93E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_05365 8463d8337772f423897452b797eea8d5 294 Pfam PF13556 PucR C-terminal helix-turn-helix domain 234 290 1.4E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain UP17_03900 8e7aeaf86389eab58643f614894ed8b6 138 Pfam PF07885 Ion channel 57 124 3.4E-10 T 11-10-2018 IPR013099 Potassium channel domain UP17_03900 8e7aeaf86389eab58643f614894ed8b6 138 SUPERFAMILY SSF81324 35 123 1.57E-11 T 11-10-2018 UP17_03900 8e7aeaf86389eab58643f614894ed8b6 138 Gene3D G3DSA:1.10.287.70 29 130 1.9E-13 T 11-10-2018 UP17_13715 04addfe401c22515ac9b2926decc8d37 425 Gene3D G3DSA:3.40.190.10 56 359 4.7E-83 T 11-10-2018 UP17_13715 04addfe401c22515ac9b2926decc8d37 425 Pfam PF13416 Bacterial extracellular solute-binding protein 56 361 2.4E-45 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein UP17_13715 04addfe401c22515ac9b2926decc8d37 425 SUPERFAMILY SSF53850 21 422 1.92E-58 T 11-10-2018 UP17_13715 04addfe401c22515ac9b2926decc8d37 425 Gene3D G3DSA:3.40.190.10 143 412 4.7E-83 T 11-10-2018 UP17_05050 e7cee8c3fb7122df9ae6f717304cc3e1 145 ProSitePatterns PS00201 Flavodoxin signature. 13 29 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 UP17_05050 e7cee8c3fb7122df9ae6f717304cc3e1 145 SUPERFAMILY SSF52218 10 127 6.36E-29 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_05050 e7cee8c3fb7122df9ae6f717304cc3e1 145 Gene3D G3DSA:3.40.50.360 9 143 1.3E-27 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_05050 e7cee8c3fb7122df9ae6f717304cc3e1 145 Pfam PF00258 Flavodoxin 13 115 1.0E-19 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 UP17_15695 ce0bba3c4da30c9b1a71ae8961b9fdeb 178 SUPERFAMILY SSF140663 3 129 1.83E-31 T 11-10-2018 IPR023203 TTHA0068-like superfamily UP17_15695 ce0bba3c4da30c9b1a71ae8961b9fdeb 178 Gene3D G3DSA:1.20.58.500 5 102 2.4E-17 T 11-10-2018 UP17_15695 ce0bba3c4da30c9b1a71ae8961b9fdeb 178 Pfam PF03745 Domain of unknown function (DUF309) 9 66 6.6E-22 T 11-10-2018 IPR005500 Protein of unknown function DUF309 UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 SUPERFAMILY SSF51735 4 251 1.11E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 9.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.4E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.4E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.4E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.4E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.4E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.4E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 5.2E-64 T 11-10-2018 UP17_19545 fb96a342ab51e2060097f0f8349c504b 252 Gene3D G3DSA:3.40.50.720 1 252 1.8E-75 T 11-10-2018 UP17_19550 e5c56aaababa5619ee9444a8e97d8951 207 Pfam PF14278 Transcriptional regulator C-terminal region 96 169 1.6E-11 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type UP17_19550 e5c56aaababa5619ee9444a8e97d8951 207 Gene3D G3DSA:1.10.357.10 7 200 1.7E-46 T 11-10-2018 UP17_19550 e5c56aaababa5619ee9444a8e97d8951 207 SUPERFAMILY SSF46689 9 73 3.75E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_19550 e5c56aaababa5619ee9444a8e97d8951 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 65 4.3E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_07145 96fea7694d764cf59e41e96e533613a1 153 Gene3D G3DSA:1.20.120.80 1 137 2.9E-6 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07145 96fea7694d764cf59e41e96e533613a1 153 Pfam PF04238 Protein of unknown function (DUF420) 6 134 3.0E-38 T 11-10-2018 IPR007352 Protein of unknown function DUF420 UP17_01220 92501ec7a692273e7f880046bdc7711d 584 Pfam PF03239 Iron permease FTR1 family 328 529 2.6E-22 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 UP17_02145 6590766d23111466b446497a6f7dbf68 218 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 11 198 3.1E-60 T 11-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein UP17_25225 a9a6cbce94901ad1d1d0d5fb75949654 424 Pfam PF02371 Transposase IS116/IS110/IS902 family 293 375 5.4E-17 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 UP17_25225 a9a6cbce94901ad1d1d0d5fb75949654 424 Pfam PF01548 Transposase 23 183 1.8E-36 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 UP17_06635 f3291f3a96b9928211b0d6d6b02f73e6 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 334 358 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_06635 f3291f3a96b9928211b0d6d6b02f73e6 397 Pfam PF01098 Cell cycle protein 13 375 1.2E-99 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_11445 39ede31a3e9b3866bdee51fae86ae489 208 Gene3D G3DSA:3.40.109.10 1 203 4.8E-41 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_11445 39ede31a3e9b3866bdee51fae86ae489 208 Pfam PF00881 Nitroreductase family 8 185 1.6E-21 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 UP17_11445 39ede31a3e9b3866bdee51fae86ae489 208 SUPERFAMILY SSF55469 1 203 2.36E-40 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 UP17_23820 78550b6e11263adb4fbeb5f9410ea67c 349 Pfam PF00953 Glycosyl transferase family 4 72 226 7.8E-45 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 UP17_23820 78550b6e11263adb4fbeb5f9410ea67c 349 ProSitePatterns PS01348 MraY family signature 2. 146 157 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 UP17_20720 88625e754bf27ed0029d1f94d4579aac 779 SUPERFAMILY SSF49899 63 292 1.53E-24 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily UP17_20720 88625e754bf27ed0029d1f94d4579aac 779 Gene3D G3DSA:2.60.120.200 54 298 1.8E-41 T 11-10-2018 UP17_20720 88625e754bf27ed0029d1f94d4579aac 779 Pfam PF00139 Legume lectin domain 64 292 2.6E-10 T 11-10-2018 IPR001220 Legume lectin domain GO:0030246 UP17_01855 1fb2c1752bbb16ac65092e60cac20384 318 Gene3D G3DSA:3.40.50.300 21 187 2.1E-45 T 11-10-2018 UP17_01855 1fb2c1752bbb16ac65092e60cac20384 318 Gene3D G3DSA:1.10.8.300 201 308 5.1E-34 T 11-10-2018 UP17_01855 1fb2c1752bbb16ac65092e60cac20384 318 PIRSF PIRSF002849 1 314 7.6E-131 T 11-10-2018 UP17_01855 1fb2c1752bbb16ac65092e60cac20384 318 SUPERFAMILY SSF52540 15 284 1.14E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_01855 1fb2c1752bbb16ac65092e60cac20384 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 170 1.7E-63 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 UP17_10905 639fb98627df480606b83005fcf9188f 177 SUPERFAMILY SSF51182 18 151 1.05E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_10905 639fb98627df480606b83005fcf9188f 177 Pfam PF07883 Cupin domain 69 143 8.9E-13 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_10905 639fb98627df480606b83005fcf9188f 177 Gene3D G3DSA:2.60.120.10 52 172 1.5E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_09370 6b556f7718696ecb40d7ec00adcaf05a 132 Pfam PF07681 DoxX 5 93 8.6E-20 T 11-10-2018 IPR032808 DoxX family UP17_09305 9c898c631a083fb0034cfe142fefccbb 77 SUPERFAMILY SSF158221 1 42 4.58E-14 T 11-10-2018 UP17_09305 9c898c631a083fb0034cfe142fefccbb 77 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 4.5E-31 T 11-10-2018 IPR009242 Protein of unknown function DUF896 UP17_09305 9c898c631a083fb0034cfe142fefccbb 77 Hamap MF_01103 UPF0291 protein . 2 60 16.385 T 11-10-2018 IPR009242 Protein of unknown function DUF896 UP17_09305 9c898c631a083fb0034cfe142fefccbb 77 Gene3D G3DSA:1.10.287.540 1 56 4.2E-23 T 11-10-2018 UP17_05145 c138f01d59aea9418509262958bf8d54 188 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 6 183 1.8E-36 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_20740 22be07370e80d0da5eeab28f029a6cf7 266 Pfam PF01740 STAS domain 156 253 9.3E-5 T 11-10-2018 IPR002645 STAS domain UP17_20740 22be07370e80d0da5eeab28f029a6cf7 266 Gene3D G3DSA:3.30.750.24 148 264 5.8E-31 T 11-10-2018 IPR036513 STAS domain superfamily UP17_20740 22be07370e80d0da5eeab28f029a6cf7 266 SUPERFAMILY SSF52091 153 258 2.55E-9 T 11-10-2018 IPR036513 STAS domain superfamily UP17_08235 d45291c504cb0f1de47809875b466dae 179 Pfam PF10628 Outer spore coat protein E (CotE) 3 174 3.3E-69 T 11-10-2018 IPR018901 Spore coat protein CotE UP17_07555 6f4887ca21a39c30ce545589db0c9de5 26 Pfam PF08183 Stage V sporulation protein family 1 25 8.8E-14 T 11-10-2018 IPR012609 Sporulation stage V, protein M UP17_06935 ab152e5951d850b81f80a19a8bad6a2c 69 Gene3D G3DSA:3.10.20.730 1 58 6.0E-21 T 11-10-2018 UP17_06935 ab152e5951d850b81f80a19a8bad6a2c 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 1.9E-23 T 11-10-2018 IPR009907 Protein of unknown function DUF1447 UP17_06935 ab152e5951d850b81f80a19a8bad6a2c 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 64 3.0E-17 T 11-10-2018 IPR009907 Protein of unknown function DUF1447 UP17_00170 767e7e6e8e8f5e27f4010a45c6055647 68 Pfam PF10764 Inhibitor of sigma-G Gin 15 59 7.5E-18 T 11-10-2018 IPR019700 Anti-sigma-G factor Gin UP17_25385 87a341ebf76057d7cfb882623769d66c 304 Pfam PF01939 Endonuclease NucS 185 292 2.0E-8 T 11-10-2018 IPR002793 Endonuclease NucS GO:0004519 UP17_25385 87a341ebf76057d7cfb882623769d66c 304 Gene3D G3DSA:3.40.1350.10 183 295 5.0E-14 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 UP17_05030 a1f62daaeac4658dae4cff6e5ae09d0e 217 Gene3D G3DSA:1.10.3720.10 1 217 1.6E-54 T 11-10-2018 IPR035906 MetI-like superfamily UP17_05030 a1f62daaeac4658dae4cff6e5ae09d0e 217 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 10 216 1.4E-70 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 UP17_05030 a1f62daaeac4658dae4cff6e5ae09d0e 217 SUPERFAMILY SSF161098 3 215 2.49E-50 T 11-10-2018 IPR035906 MetI-like superfamily UP17_05030 a1f62daaeac4658dae4cff6e5ae09d0e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 216 1.8E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_17430 028427df59e9e49db403b0e1f4b86260 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 3.3E-150 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 UP17_17430 028427df59e9e49db403b0e1f4b86260 342 Gene3D G3DSA:2.40.10.240 64 162 1.4E-135 T 11-10-2018 UP17_17430 028427df59e9e49db403b0e1f4b86260 342 Gene3D G3DSA:3.40.1780.10 14 341 1.4E-135 T 11-10-2018 UP17_17430 028427df59e9e49db403b0e1f4b86260 342 SUPERFAMILY SSF111337 1 341 2.62E-139 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 UP17_17430 028427df59e9e49db403b0e1f4b86260 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 2.1E-141 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 UP17_17430 028427df59e9e49db403b0e1f4b86260 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.74 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 UP17_08685 2645c36ffa257b469f2b6830634a06bf 102 Pfam PF11337 Protein of unknown function (DUF3139) 5 87 7.3E-9 T 11-10-2018 IPR021486 Protein of unknown function DUF3139 UP17_23250 0ccc7db684e461c187fb68916419aab5 502 PIRSF PIRSF005690 9 492 1.8E-137 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_23250 0ccc7db684e461c187fb68916419aab5 502 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 24 477 1.2E-146 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_12105 09793862b323fce68f6de445034b88d9 107 SMART SM00418 9 91 1.7E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_12105 09793862b323fce68f6de445034b88d9 107 Pfam PF01022 Bacterial regulatory protein, arsR family 16 63 1.4E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_12105 09793862b323fce68f6de445034b88d9 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.0E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_12105 09793862b323fce68f6de445034b88d9 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.0E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_12105 09793862b323fce68f6de445034b88d9 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.0E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 UP17_12105 09793862b323fce68f6de445034b88d9 107 Gene3D G3DSA:1.10.10.10 3 107 1.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_12105 09793862b323fce68f6de445034b88d9 107 SUPERFAMILY SSF46785 13 97 2.16E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_08820 9a681b751ffe647e178a277ce30bcc86 112 SUPERFAMILY SSF46785 13 110 1.19E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_08820 9a681b751ffe647e178a277ce30bcc86 112 Gene3D G3DSA:1.10.10.10 10 111 1.7E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_08820 9a681b751ffe647e178a277ce30bcc86 112 Pfam PF01638 HxlR-like helix-turn-helix 26 109 2.3E-26 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type UP17_14630 2cc9be01d849b082cfd1ef510dc7f31d 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 26 64 1.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 UP17_14630 2cc9be01d849b082cfd1ef510dc7f31d 199 SUPERFAMILY SSF46689 11 75 9.98E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_14630 2cc9be01d849b082cfd1ef510dc7f31d 199 Pfam PF14278 Transcriptional regulator C-terminal region 95 174 4.6E-9 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type UP17_14630 2cc9be01d849b082cfd1ef510dc7f31d 199 Gene3D G3DSA:1.10.357.10 9 190 4.4E-39 T 11-10-2018 UP17_06125 45c10b7ec7bf24c6da1b141ae433027c 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 5 118 1.2E-49 T 11-10-2018 IPR014204 Sporulation stage V, protein AE UP17_06125 45c10b7ec7bf24c6da1b141ae433027c 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 5 113 1.1E-37 T 11-10-2018 IPR005562 SpoVA UP17_17305 acf7bf7c7bf93dfa02591197ef37f3bd 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 288 3.3E-46 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 UP17_22725 9f802f5f6e1bacaca74309551b546bc6 287 Gene3D G3DSA:3.30.750.24 162 282 2.6E-31 T 11-10-2018 IPR036513 STAS domain superfamily UP17_22725 9f802f5f6e1bacaca74309551b546bc6 287 SUPERFAMILY SSF52091 167 276 6.08E-11 T 11-10-2018 IPR036513 STAS domain superfamily UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 SMART SM00345 23 81 4.5E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 Gene3D G3DSA:1.10.10.10 16 81 9.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 SMART SM00895 90 219 9.1E-6 T 11-10-2018 IPR011711 GntR, C-terminal UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 Gene3D G3DSA:1.20.120.530 84 223 1.9E-15 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 80 7.3E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 Pfam PF07729 FCD domain 90 206 7.6E-15 T 11-10-2018 IPR011711 GntR, C-terminal UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 SUPERFAMILY SSF48008 86 226 3.4E-18 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 8.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 8.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 UP17_01595 e3231c0eaad6c37f7b34759f6e5b9703 243 SUPERFAMILY SSF46785 13 84 1.18E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_06670 f82ba42852cf866b6c398571c3a0fe81 450 Pfam PF02386 Cation transport protein 41 428 1.8E-52 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 UP17_10075 c9ecefb5294bc32d5c8f43ebc15afc61 438 Pfam PF03553 Na+/H+ antiporter family 240 422 1.4E-14 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 UP17_10075 c9ecefb5294bc32d5c8f43ebc15afc61 438 Pfam PF03553 Na+/H+ antiporter family 73 212 2.1E-14 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 UP17_01875 fe0059d841596071ca68869f0a6ff1bb 443 Pfam PF00860 Permease family 16 404 6.3E-51 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 UP17_01875 fe0059d841596071ca68869f0a6ff1bb 443 PIRSF PIRSF005353 1 443 3.1E-168 T 11-10-2018 IPR026033 Purine permease PbuG-like UP17_13930 243979f9ae10e32eb1bfbc77483da0ec 190 Gene3D G3DSA:1.10.1760.20 1 179 2.2E-50 T 11-10-2018 UP17_13930 243979f9ae10e32eb1bfbc77483da0ec 190 Pfam PF02632 BioY family 33 172 2.9E-36 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 UP17_13930 243979f9ae10e32eb1bfbc77483da0ec 190 PIRSF PIRSF016661 1 181 2.0E-47 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 UP17_13950 0bb5b8814f9795ae31f73681da45fd15 189 Gene3D G3DSA:1.10.10.2520 77 155 5.7E-30 T 11-10-2018 UP17_13950 0bb5b8814f9795ae31f73681da45fd15 189 Gene3D G3DSA:3.10.350.10 13 76 2.6E-13 T 11-10-2018 IPR036779 LysM domain superfamily UP17_13950 0bb5b8814f9795ae31f73681da45fd15 189 Gene3D G3DSA:2.40.10.420 156 188 1.0E-10 T 11-10-2018 UP17_13950 0bb5b8814f9795ae31f73681da45fd15 189 Pfam PF01476 LysM domain 27 69 2.1E-12 T 11-10-2018 IPR018392 LysM domain UP17_13950 0bb5b8814f9795ae31f73681da45fd15 189 SUPERFAMILY SSF54106 26 69 8.76E-10 T 11-10-2018 UP17_13950 0bb5b8814f9795ae31f73681da45fd15 189 Pfam PF07486 Cell Wall Hydrolase 90 187 3.4E-26 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 UP17_13950 0bb5b8814f9795ae31f73681da45fd15 189 SMART SM00257 26 69 6.7E-11 T 11-10-2018 IPR018392 LysM domain UP17_08055 df92101043b2b3ff4bc20309950bd761 200 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 6 192 1.1E-98 T 11-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B UP17_08055 df92101043b2b3ff4bc20309950bd761 200 SUPERFAMILY SSF52507 6 192 2.35E-30 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 UP17_08055 df92101043b2b3ff4bc20309950bd761 200 Pfam PF02441 Flavoprotein 6 134 5.0E-18 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 UP17_08055 df92101043b2b3ff4bc20309950bd761 200 Gene3D G3DSA:3.40.50.1950 1 199 2.1E-58 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 UP17_08055 df92101043b2b3ff4bc20309950bd761 200 PIRSF PIRSF001390 1 195 1.2E-80 T 11-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B UP17_01845 cc81b6ff21567ef1d53d8af4e31beeda 975 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 11 199 2.5E-62 T 11-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 UP17_18080 73651a774031efd388d7f6351dd67630 312 SMART SM00382 162 302 2.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_18080 73651a774031efd388d7f6351dd67630 312 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 7.1E-29 T 11-10-2018 IPR009928 Primosomal DnaI, N-terminal UP17_18080 73651a774031efd388d7f6351dd67630 312 SUPERFAMILY SSF52540 126 278 5.66E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_18080 73651a774031efd388d7f6351dd67630 312 Gene3D G3DSA:3.40.50.300 108 305 7.9E-54 T 11-10-2018 UP17_18080 73651a774031efd388d7f6351dd67630 312 Pfam PF01695 IstB-like ATP binding protein 153 273 2.0E-10 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 UP17_01945 e3c2baf09673f343086b2fc25ae26a5f 66 Pfam PF14044 NETI protein 8 63 2.2E-26 T 11-10-2018 IPR025930 NETI protein UP17_18970 4bf494e3c0199cfce626c73e7868aa38 221 ProDom PD210561 YWRJ 6 221 1.0E-62 T 11-10-2018 IPR020173 Uncharacterised protein family YwrJ UP17_18240 a328e2d324268059a0c37b7f0f055137 100 Pfam PF14007 YtpI-like protein 5 90 2.6E-33 T 11-10-2018 IPR025618 YtpI-like protein UP17_11065 4bf44161388d8f9edf9147e77bd33cde 508 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 32 483 3.5E-145 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_11065 4bf44161388d8f9edf9147e77bd33cde 508 PIRSF PIRSF005690 10 498 7.2E-137 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_18625 cb4894e4faba947a82ee33f3ab8f90aa 424 SUPERFAMILY SSF56672 15 330 9.39E-56 T 11-10-2018 UP17_18625 cb4894e4faba947a82ee33f3ab8f90aa 424 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 67 272 2.4E-48 T 11-10-2018 IPR000477 Reverse transcriptase domain UP17_18625 cb4894e4faba947a82ee33f3ab8f90aa 424 Pfam PF08388 Group II intron, maturase-specific domain 292 362 9.0E-17 T 11-10-2018 IPR013597 Group II intron, maturase-specific UP17_18625 cb4894e4faba947a82ee33f3ab8f90aa 424 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 11 357 2.6E-129 T 11-10-2018 IPR030931 Group II intron reverse transcriptase/maturase UP17_19310 f337416c0f0387e2c55f3c98bd87a729 449 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_19310 f337416c0f0387e2c55f3c98bd87a729 449 Gene3D G3DSA:1.20.1740.10 7 449 1.6E-67 T 11-10-2018 UP17_19310 f337416c0f0387e2c55f3c98bd87a729 449 Pfam PF00324 Amino acid permease 16 442 8.7E-93 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_19310 f337416c0f0387e2c55f3c98bd87a729 449 PIRSF PIRSF006060 1 448 3.1E-72 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_19050 03f307f7c17609f5eca23d70049e2f9c 372 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 362 2.1E-69 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_19050 03f307f7c17609f5eca23d70049e2f9c 372 Pfam PF03845 Spore germination protein 5 324 1.7E-73 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 UP17_17450 b7cd38d8477ca108cb0f187c46759714 167 Gene3D G3DSA:3.10.20.420 35 88 1.3E-25 T 11-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily UP17_17450 b7cd38d8477ca108cb0f187c46759714 167 Gene3D G3DSA:3.30.70.1740 90 166 3.4E-30 T 11-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily UP17_17450 b7cd38d8477ca108cb0f187c46759714 167 Pfam PF08955 BofC C-terminal domain 90 162 7.2E-27 T 11-10-2018 IPR015050 Bypass of forespore C, C-terminal UP17_17450 b7cd38d8477ca108cb0f187c46759714 167 Pfam PF08977 Bypass of Forespore C, N terminal 39 87 1.2E-23 T 11-10-2018 IPR015071 Bypass-of-forespore C, N-terminal UP17_08325 f5f3c43d754cf2b29b06073ca7e170b9 150 SUPERFAMILY SSF160631 6 144 2.88E-21 T 11-10-2018 UP17_08325 f5f3c43d754cf2b29b06073ca7e170b9 150 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 8 142 1.7E-16 T 11-10-2018 IPR018958 Knr4/Smi1-like domain UP17_08325 f5f3c43d754cf2b29b06073ca7e170b9 150 SMART SM00860 8 143 3.6E-8 T 11-10-2018 IPR018958 Knr4/Smi1-like domain UP17_08325 f5f3c43d754cf2b29b06073ca7e170b9 150 Gene3D G3DSA:3.40.1580.10 2 147 1.7E-21 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily UP17_08775 2b95fa226d3df275eba19b31e63b0e9a 305 Pfam PF00005 ABC transporter 21 162 2.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_08775 2b95fa226d3df275eba19b31e63b0e9a 305 Gene3D G3DSA:3.40.50.300 1 236 2.2E-63 T 11-10-2018 UP17_08775 2b95fa226d3df275eba19b31e63b0e9a 305 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_08775 2b95fa226d3df275eba19b31e63b0e9a 305 SMART SM00382 30 210 3.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_08775 2b95fa226d3df275eba19b31e63b0e9a 305 SUPERFAMILY SSF52540 4 222 4.6E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_08775 2b95fa226d3df275eba19b31e63b0e9a 305 Pfam PF13732 Domain of unknown function (DUF4162) 216 301 2.0E-7 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 UP17_10350 eebcf95973c953f959ac9ebaaf9f2e14 180 Pfam PF02417 Chromate transporter 4 175 3.1E-39 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 UP17_09090 ddea820919d92f78da084ad92033a10c 183 Gene3D G3DSA:3.40.430.10 2 180 6.0E-34 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_09090 ddea820919d92f78da084ad92033a10c 183 Pfam PF01872 RibD C-terminal domain 91 174 2.5E-14 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 UP17_09090 ddea820919d92f78da084ad92033a10c 183 SUPERFAMILY SSF53597 4 180 1.2E-27 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 UP17_16185 ce690db17a9aa186b045685bb2883b33 293 Pfam PF01734 Patatin-like phospholipase 6 194 9.7E-32 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 UP17_16185 ce690db17a9aa186b045685bb2883b33 293 Gene3D G3DSA:3.40.1090.10 103 291 1.3E-22 T 11-10-2018 UP17_16185 ce690db17a9aa186b045685bb2883b33 293 Gene3D G3DSA:3.40.1090.20 1 86 1.4E-19 T 11-10-2018 UP17_16185 ce690db17a9aa186b045685bb2883b33 293 SUPERFAMILY SSF52151 6 291 1.46E-43 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase UP17_20200 c2adcfc772f0f254b88dde9e625e343d 343 Pfam PF14072 DNA-sulfur modification-associated 31 341 2.1E-24 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB UP17_24480 05c3f74a278123a7ac98c8be328d5c7c 273 Gene3D G3DSA:3.40.1190.20 1 270 2.0E-91 T 11-10-2018 IPR029056 Ribokinase-like UP17_24480 05c3f74a278123a7ac98c8be328d5c7c 273 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 259 2.3E-83 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 UP17_24480 05c3f74a278123a7ac98c8be328d5c7c 273 SUPERFAMILY SSF53613 1 259 4.21E-73 T 11-10-2018 IPR029056 Ribokinase-like UP17_24480 05c3f74a278123a7ac98c8be328d5c7c 273 Pfam PF08543 Phosphomethylpyrimidine kinase 11 258 2.2E-88 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 UP17_18885 766dbd7d0c2622e6c55fd97fdc51310f 157 Gene3D G3DSA:3.30.530.20 2 145 1.8E-30 T 11-10-2018 IPR023393 START-like domain superfamily UP17_18885 766dbd7d0c2622e6c55fd97fdc51310f 157 SUPERFAMILY SSF55961 2 150 4.81E-27 T 11-10-2018 UP17_18885 766dbd7d0c2622e6c55fd97fdc51310f 157 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 143 3.5E-17 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_04690 46673ddbf2e659a4675f330186faa782 84 Pfam PF14148 YhdB-like protein 1 70 9.8E-36 T 11-10-2018 IPR025431 YhdB-like protein UP17_20805 0c16f6a7b3873d1ccd2af85cfe164999 298 SUPERFAMILY SSF103481 37 139 2.35E-12 T 11-10-2018 UP17_20805 0c16f6a7b3873d1ccd2af85cfe164999 298 Pfam PF00892 EamA-like transporter family 150 279 2.3E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_20805 0c16f6a7b3873d1ccd2af85cfe164999 298 Pfam PF00892 EamA-like transporter family 7 136 6.2E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_20805 0c16f6a7b3873d1ccd2af85cfe164999 298 SUPERFAMILY SSF103481 183 282 1.16E-13 T 11-10-2018 UP17_15465 ea296284dad79d1e41f4ec3b01a393c0 75 Gene3D G3DSA:1.20.1740.10 3 74 2.1E-7 T 11-10-2018 UP17_20345 a9154875edabc5b1d0e97b0b0f205502 106 PIRSF PIRSF036521 1 106 7.4E-49 T 11-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related UP17_20345 a9154875edabc5b1d0e97b0b0f205502 106 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 2.8E-14 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core UP17_20345 a9154875edabc5b1d0e97b0b0f205502 106 SUPERFAMILY SSF101386 1 103 1.23E-23 T 11-10-2018 UP17_20345 a9154875edabc5b1d0e97b0b0f205502 106 Gene3D G3DSA:1.10.287.1080 1 102 6.7E-24 T 11-10-2018 UP17_14060 64ea12fcf413c71b2ac5f77bf0b2f77a 259 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 254 16.305 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UP17_14060 64ea12fcf413c71b2ac5f77bf0b2f77a 259 Pfam PF02673 Bacitracin resistance protein BacA 6 249 9.9E-69 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 UP17_20520 3bc810a8441e6272fa070d07b0aeb0de 321 Pfam PF00892 EamA-like transporter family 161 294 4.1E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_20520 3bc810a8441e6272fa070d07b0aeb0de 321 Pfam PF00892 EamA-like transporter family 8 146 2.7E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_20520 3bc810a8441e6272fa070d07b0aeb0de 321 SUPERFAMILY SSF103481 50 148 4.18E-5 T 11-10-2018 UP17_02510 907c138c74c312543e520d420a71580f 368 Pfam PF01594 AI-2E family transporter 26 349 8.1E-88 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like UP17_22770 386351750a27222d521b0ae1681bee9a 134 Pfam PF08868 YugN-like family 4 131 2.1E-51 T 11-10-2018 IPR014967 Uncharacterised protein family, YugN-like UP17_22770 386351750a27222d521b0ae1681bee9a 134 SUPERFAMILY SSF160755 1 132 2.48E-36 T 11-10-2018 IPR036491 YugN-like superfamily UP17_22770 386351750a27222d521b0ae1681bee9a 134 Gene3D G3DSA:3.30.310.100 3 105 3.5E-29 T 11-10-2018 IPR036491 YugN-like superfamily UP17_13055 8a658dc318c0cf261c1d31a76848300c 295 Pfam PF00268 Ribonucleotide reductase, small chain 23 240 4.5E-20 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 UP17_13055 8a658dc318c0cf261c1d31a76848300c 295 Gene3D G3DSA:1.10.620.20 1 286 3.4E-99 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 UP17_13055 8a658dc318c0cf261c1d31a76848300c 295 SUPERFAMILY SSF47240 15 274 8.68E-45 T 11-10-2018 IPR009078 Ferritin-like superfamily UP17_16125 e711a2fc6416d5ecf0ef7eefb8f1c0dc 202 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 112 2.4E-32 T 11-10-2018 IPR014245 Sporulation stage III, protein AF UP17_16125 e711a2fc6416d5ecf0ef7eefb8f1c0dc 202 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 197 1.4E-38 T 11-10-2018 IPR014245 Sporulation stage III, protein AF UP17_07330 4be6a9031605eb8f7bae4a66e0a4ffb6 230 Pfam PF05949 Bacterial protein of unknown function (DUF881) 94 223 2.6E-33 T 11-10-2018 IPR010273 Protein of unknown function DUF881 UP17_07330 4be6a9031605eb8f7bae4a66e0a4ffb6 230 Gene3D G3DSA:3.30.70.1880 92 227 8.6E-33 T 11-10-2018 UP17_19715 71b3b6bf5c9d3533de5f7aa8ba74f91d 215 SUPERFAMILY SSF100950 2 212 1.26E-73 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_19715 71b3b6bf5c9d3533de5f7aa8ba74f91d 215 Pfam PF01144 Coenzyme A transferase 7 198 2.1E-46 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19715 71b3b6bf5c9d3533de5f7aa8ba74f91d 215 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 2 207 5.0E-96 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 UP17_19715 71b3b6bf5c9d3533de5f7aa8ba74f91d 215 SMART SM00882 4 200 7.6E-75 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 UP17_19715 71b3b6bf5c9d3533de5f7aa8ba74f91d 215 Gene3D G3DSA:3.40.1080.10 1 212 1.3E-101 T 11-10-2018 UP17_19715 71b3b6bf5c9d3533de5f7aa8ba74f91d 215 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 42 50 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 UP17_24655 86af255230c9e2c6ae0d011d6fc7b72c 397 Gene3D G3DSA:3.30.420.40 7 204 4.1E-29 T 11-10-2018 UP17_24655 86af255230c9e2c6ae0d011d6fc7b72c 397 Pfam PF06406 StbA protein 176 341 7.5E-7 T 11-10-2018 IPR009440 Plasmid segregation protein ParM/StbA UP17_24655 86af255230c9e2c6ae0d011d6fc7b72c 397 SUPERFAMILY SSF53067 5 198 2.01E-9 T 11-10-2018 UP17_24655 86af255230c9e2c6ae0d011d6fc7b72c 397 Gene3D G3DSA:3.30.420.40 205 342 4.1E-29 T 11-10-2018 UP17_24655 86af255230c9e2c6ae0d011d6fc7b72c 397 SUPERFAMILY SSF53067 209 349 7.95E-17 T 11-10-2018 UP17_02560 308ecebb6503a57fe8c3a053df8851b2 164 Pfam PF03703 Bacterial PH domain 81 154 7.9E-15 T 11-10-2018 IPR005182 Domain of unknown function DUF304 UP17_22650 b187697dbb3648711d3d64797b45ae3d 455 PIRSF PIRSF006060 1 454 4.3E-75 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_22650 b187697dbb3648711d3d64797b45ae3d 455 Gene3D G3DSA:1.20.1740.10 10 454 9.9E-66 T 11-10-2018 UP17_22650 b187697dbb3648711d3d64797b45ae3d 455 Pfam PF00324 Amino acid permease 17 447 4.2E-110 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_22650 b187697dbb3648711d3d64797b45ae3d 455 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_22895 c1cfe7e603490a42e0808d8828aa0bfd 493 Pfam PF00361 Proton-conducting membrane transporter 127 414 6.1E-53 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_22895 c1cfe7e603490a42e0808d8828aa0bfd 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 7.1E-15 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_22895 c1cfe7e603490a42e0808d8828aa0bfd 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 7.1E-15 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_22895 c1cfe7e603490a42e0808d8828aa0bfd 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 7.1E-15 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_22895 c1cfe7e603490a42e0808d8828aa0bfd 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 7.1E-15 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_22895 c1cfe7e603490a42e0808d8828aa0bfd 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 7.1E-15 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 Pfam PF03176 MMPL family 474 719 1.0E-45 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 Pfam PF03176 MMPL family 40 393 9.2E-59 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 SUPERFAMILY SSF82866 527 717 2.22E-27 T 11-10-2018 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 Gene3D G3DSA:1.20.1640.10 537 723 1.6E-5 T 11-10-2018 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 Gene3D G3DSA:1.20.1640.10 188 351 3.0E-9 T 11-10-2018 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 SUPERFAMILY SSF82866 165 349 4.32E-30 T 11-10-2018 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 PRINTS PR00702 Acriflavin resistance protein family signature 320 343 8.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 PRINTS PR00702 Acriflavin resistance protein family signature 212 233 8.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_23640 f3ac539eab359218055d8a4d249d318e 731 PRINTS PR00702 Acriflavin resistance protein family signature 185 208 8.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 UP17_17850 473263d611e72b77095181247c396cef 154 Gene3D G3DSA:3.10.129.10 6 149 2.9E-36 T 11-10-2018 UP17_17850 473263d611e72b77095181247c396cef 154 Pfam PF03061 Thioesterase superfamily 35 117 2.8E-14 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_17850 473263d611e72b77095181247c396cef 154 SUPERFAMILY SSF54637 13 146 4.43E-35 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_05945 40e9c16660332c426ffb969e122ba6b0 60 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 4 57 2.0E-13 T 11-10-2018 IPR024558 ComZ UP17_05945 40e9c16660332c426ffb969e122ba6b0 60 Pfam PF10815 ComZ 4 58 2.6E-27 T 11-10-2018 IPR024558 ComZ UP17_15720 5fff3b68252854eba088e34b28c32e0a 201 Pfam PF14097 Stage V sporulation protein AE1 6 185 5.5E-82 T 11-10-2018 IPR025914 Stage V sporulation protein AE UP17_21945 568066086c2ef85b3b1c66d79e741166 211 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 99 202 7.8E-8 T 11-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger UP17_21945 568066086c2ef85b3b1c66d79e741166 211 Gene3D G3DSA:1.20.1280.250 1 84 4.9E-11 T 11-10-2018 IPR038344 EF-G binding protein, N-terminal domain superfamily UP17_21945 568066086c2ef85b3b1c66d79e741166 211 Pfam PF07299 Elongation factor G-binding protein, N-terminal 4 86 2.4E-26 T 11-10-2018 IPR010841 Elongation factor G-binding protein, N-terminal UP17_02965 b29bd6b8eac109c17c6fa779ec9fde2c 48 SUPERFAMILY SSF100985 1 41 4.18E-14 T 11-10-2018 IPR036916 Sporulation inhibitor A superfamily UP17_02965 b29bd6b8eac109c17c6fa779ec9fde2c 48 Pfam PF08970 Sporulation inhibitor A 1 39 5.1E-16 T 11-10-2018 IPR015064 Sporulation inhibitor A UP17_02965 b29bd6b8eac109c17c6fa779ec9fde2c 48 Gene3D G3DSA:1.10.287.1100 4 37 9.0E-15 T 11-10-2018 IPR036916 Sporulation inhibitor A superfamily UP17_25710 cd60b8176cdd07e257e9338d7c45f53c 416 SUPERFAMILY SSF53067 83 197 7.38E-5 T 11-10-2018 UP17_25710 cd60b8176cdd07e257e9338d7c45f53c 416 SUPERFAMILY SSF53067 223 388 3.24E-7 T 11-10-2018 UP17_25710 cd60b8176cdd07e257e9338d7c45f53c 416 Gene3D G3DSA:3.30.420.40 11 234 4.6E-17 T 11-10-2018 UP17_24360 97f6577014ca2e26b811fdd9787be411 146 SUPERFAMILY SSF50814 8 144 3.88E-29 T 11-10-2018 IPR012674 Calycin UP17_24360 97f6577014ca2e26b811fdd9787be411 146 Pfam PF09148 Domain of unknown function (DUF1934) 13 140 2.8E-26 T 11-10-2018 IPR015231 Protein of unknown function DUF1934 UP17_24360 97f6577014ca2e26b811fdd9787be411 146 Gene3D G3DSA:2.40.128.20 4 146 1.8E-38 T 11-10-2018 IPR012674 Calycin UP17_22640 af17ffd205567d07a40d7d8ac364fa2b 391 SUPERFAMILY SSF103473 6 376 1.03E-48 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_22640 af17ffd205567d07a40d7d8ac364fa2b 391 Gene3D G3DSA:1.20.1250.20 198 380 3.6E-15 T 11-10-2018 UP17_22640 af17ffd205567d07a40d7d8ac364fa2b 391 Pfam PF07690 Major Facilitator Superfamily 12 318 4.0E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_22640 af17ffd205567d07a40d7d8ac364fa2b 391 Gene3D G3DSA:1.20.1250.20 5 196 3.3E-25 T 11-10-2018 UP17_22640 af17ffd205567d07a40d7d8ac364fa2b 391 PRINTS PR01035 Tetracycline resistance protein signature 162 182 2.8E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_22640 af17ffd205567d07a40d7d8ac364fa2b 391 PRINTS PR01035 Tetracycline resistance protein signature 241 261 2.8E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_22640 af17ffd205567d07a40d7d8ac364fa2b 391 PRINTS PR01035 Tetracycline resistance protein signature 44 63 2.8E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 UP17_08895 7540927d3befbd3084461a65f546e7e6 193 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 4 179 8.7E-32 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT UP17_06255 80a58b03a1703a8015557e50831ae58d 317 Pfam PF01170 Putative RNA methylase family UPF0020 158 259 7.7E-8 T 11-10-2018 IPR000241 Putative RNA methylase domain UP17_06255 80a58b03a1703a8015557e50831ae58d 317 SUPERFAMILY SSF53335 160 268 1.49E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_06255 80a58b03a1703a8015557e50831ae58d 317 Gene3D G3DSA:3.40.50.150 155 317 2.1E-19 T 11-10-2018 UP17_13370 1fbbb339cb6dfb17cb59bd0ecffd12e8 400 Pfam PF07690 Major Facilitator Superfamily 10 316 1.2E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_13370 1fbbb339cb6dfb17cb59bd0ecffd12e8 400 SUPERFAMILY SSF103473 3 398 1.96E-33 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_13370 1fbbb339cb6dfb17cb59bd0ecffd12e8 400 Gene3D G3DSA:1.20.1250.20 1 394 2.7E-30 T 11-10-2018 UP17_14515 4520a6c0dc6013e77384fcfc46b22e15 557 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 2 555 1.9E-216 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 UP17_14515 4520a6c0dc6013e77384fcfc46b22e15 557 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 556 33.26 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 UP17_14515 4520a6c0dc6013e77384fcfc46b22e15 557 PIRSF PIRSF001294 1 557 9.6E-246 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 UP17_14515 4520a6c0dc6013e77384fcfc46b22e15 557 Pfam PF03814 Potassium-transporting ATPase A subunit 8 554 3.5E-244 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 UP17_20810 aada71da0cb7e15a6dfe879b59cb4c78 67 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 5 67 9.4E-31 T 11-10-2018 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon UP17_07860 ea7406e5809b9da9e5c11f41bea7b3db 258 Pfam PF01311 Bacterial export proteins, family 1 9 242 2.3E-73 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UP17_07860 ea7406e5809b9da9e5c11f41bea7b3db 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 74 93 1.7E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UP17_07860 ea7406e5809b9da9e5c11f41bea7b3db 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 1.7E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UP17_07860 ea7406e5809b9da9e5c11f41bea7b3db 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 1.7E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UP17_07860 ea7406e5809b9da9e5c11f41bea7b3db 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 1.7E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 UP17_07860 ea7406e5809b9da9e5c11f41bea7b3db 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 252 1.2E-69 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 UP17_09385 a4048c044b670f87bd54760b151a2bc3 158 Pfam PF07301 Protein of unknown function (DUF1453) 4 147 7.9E-57 T 11-10-2018 IPR009916 Protein of unknown function DUF1453 UP17_09385 a4048c044b670f87bd54760b151a2bc3 158 PIRSF PIRSF021441 1 157 2.6E-63 T 11-10-2018 IPR031306 CcdC protein UP17_06495 6c4e1b612b40aa97489ecdbeb1b7bc7b 211 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 8 204 5.0E-44 T 11-10-2018 IPR006214 Bax inhibitor 1-related UP17_03835 3ca83fc372578b38c9c3c4c07c4e5fad 176 Gene3D G3DSA:3.40.50.360 1 175 6.5E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_03835 3ca83fc372578b38c9c3c4c07c4e5fad 176 Pfam PF03358 NADPH-dependent FMN reductase 45 105 1.5E-9 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 UP17_03835 3ca83fc372578b38c9c3c4c07c4e5fad 176 SUPERFAMILY SSF52218 1 170 3.67E-42 T 11-10-2018 IPR029039 Flavoprotein-like superfamily UP17_04115 e33830e7e6e18a7086decb7d809c5894 169 Gene3D G3DSA:1.20.1260.10 1 156 1.1E-63 T 11-10-2018 IPR012347 Ferritin-like UP17_04115 e33830e7e6e18a7086decb7d809c5894 169 Pfam PF11553 Protein of unknown function (DUF3231) 2 168 6.4E-40 T 11-10-2018 IPR021617 Protein of unknown function DUF3231 UP17_21625 f92e30fc3e342319889f004e76e8048c 142 SUPERFAMILY SSF55961 3 141 3.08E-40 T 11-10-2018 UP17_21625 f92e30fc3e342319889f004e76e8048c 142 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 141 9.7E-14 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like UP17_21625 f92e30fc3e342319889f004e76e8048c 142 Gene3D G3DSA:3.30.530.20 1 141 3.2E-40 T 11-10-2018 IPR023393 START-like domain superfamily UP17_02045 df2b173b414b977c712e4a78d2852d5b 389 Gene3D G3DSA:3.10.570.10 53 389 2.1E-143 T 11-10-2018 UP17_02045 df2b173b414b977c712e4a78d2852d5b 389 Pfam PF07537 CamS sex pheromone cAM373 precursor 57 381 4.3E-133 T 11-10-2018 IPR011426 CamS sex pheromone cAM373 UP17_02045 df2b173b414b977c712e4a78d2852d5b 389 PIRSF PIRSF012509 1 389 2.6E-157 T 11-10-2018 IPR011426 CamS sex pheromone cAM373 UP17_22380 6c66fd333ea29e06d604d5c90c15d6e5 305 PIRSF PIRSF000196 1 305 7.7E-122 T 11-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 UP17_22380 6c66fd333ea29e06d604d5c90c15d6e5 305 Gene3D G3DSA:3.20.20.530 22 305 4.0E-86 T 11-10-2018 UP17_22380 6c66fd333ea29e06d604d5c90c15d6e5 305 SUPERFAMILY SSF51730 37 300 5.1E-69 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like UP17_22380 6c66fd333ea29e06d604d5c90c15d6e5 305 Pfam PF01619 Proline dehydrogenase 45 294 1.4E-34 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 UP17_24500 1f13f27159788ed83b1595aad7a84559 139 SMART SM00347 24 123 8.6E-24 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_24500 1f13f27159788ed83b1595aad7a84559 139 SUPERFAMILY SSF46785 7 137 3.37E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_24500 1f13f27159788ed83b1595aad7a84559 139 Gene3D G3DSA:1.10.10.10 1 139 3.1E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_24500 1f13f27159788ed83b1595aad7a84559 139 Pfam PF13463 Winged helix DNA-binding domain 34 96 2.9E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 UP17_24100 b55f669a0d4f4716846d1332dc51e883 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 99 2.6E-26 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like UP17_24100 b55f669a0d4f4716846d1332dc51e883 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 104 20.441 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 UP17_20665 e1563f11b7e0c5654d92124c3b1db29d 442 Gene3D G3DSA:1.20.1730.10 4 441 1.1E-21 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_04415 b5403e4592b14ead206535e2d8f2e426 285 Pfam PF12671 Putative amidase domain 126 277 1.5E-37 T 11-10-2018 IPR024301 Putative amidase domain UP17_18655 6010a53adb370faddefee2c2a709ffaf 524 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 519 3.0E-156 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 UP17_18655 6010a53adb370faddefee2c2a709ffaf 524 Pfam PF02652 L-lactate permease 14 518 2.1E-160 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 UP17_17010 a59bd6a8e4332a2e4b79870d9c8108d1 89 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 83 2.3E-37 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 UP17_17010 a59bd6a8e4332a2e4b79870d9c8108d1 89 PIRSF PIRSF037258 1 88 3.4E-46 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 UP17_17010 a59bd6a8e4332a2e4b79870d9c8108d1 89 Hamap MF_01507 UPF0297 protein . 1 85 28.867 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 UP17_07335 302226861e827dbc4ffd5164982cd758 238 Gene3D G3DSA:3.30.70.1880 83 237 3.2E-15 T 11-10-2018 UP17_07335 302226861e827dbc4ffd5164982cd758 238 Pfam PF05949 Bacterial protein of unknown function (DUF881) 85 230 8.4E-24 T 11-10-2018 IPR010273 Protein of unknown function DUF881 UP17_05755 cb31933fb43cb11de0a21c739f452710 424 SUPERFAMILY SSF103473 4 412 1.83E-64 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_05755 cb31933fb43cb11de0a21c739f452710 424 Pfam PF07690 Major Facilitator Superfamily 15 343 8.4E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_05755 cb31933fb43cb11de0a21c739f452710 424 Gene3D G3DSA:1.20.1250.20 2 413 2.6E-51 T 11-10-2018 UP17_22475 323c600a2ce09c512ece94a6ea1810a1 486 PIRSF PIRSF006060 4 484 4.4E-90 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_22475 323c600a2ce09c512ece94a6ea1810a1 486 Gene3D G3DSA:1.20.1740.10 13 477 3.0E-63 T 11-10-2018 UP17_22475 323c600a2ce09c512ece94a6ea1810a1 486 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 UP17_22475 323c600a2ce09c512ece94a6ea1810a1 486 Pfam PF00324 Amino acid permease 21 473 1.1E-141 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 UP17_23960 7b47f12ea098b174a0f001075550f0b6 202 Pfam PF01810 LysE type translocator 14 198 2.0E-27 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_21770 bf7fccbeb9f16ce8470e466cf9191cb7 227 Pfam PF01522 Polysaccharide deacetylase 31 139 2.2E-26 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 UP17_21770 bf7fccbeb9f16ce8470e466cf9191cb7 227 Gene3D G3DSA:3.20.20.370 21 227 2.0E-52 T 11-10-2018 UP17_21770 bf7fccbeb9f16ce8470e466cf9191cb7 227 SUPERFAMILY SSF88713 8 227 4.2E-47 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 UP17_20125 5a766b7a721571a6e6fa4861d7faee52 43 TIGRFAM TIGR03093 SASP_sspL: small, acid-soluble spore protein L 7 43 3.9E-19 T 11-10-2018 IPR017526 Small acid-soluble spore protein, SspL UP17_25105 21e30b29d9e4314398cf4b7f94aeae14 223 Gene3D G3DSA:3.40.50.720 1 220 3.0E-33 T 11-10-2018 UP17_25105 21e30b29d9e4314398cf4b7f94aeae14 223 SUPERFAMILY SSF51735 1 206 6.19E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily UP17_21200 8f4798633f95f3a2584657a5bf082ffa 183 Pfam PF13302 Acetyltransferase (GNAT) domain 14 154 2.8E-32 T 11-10-2018 IPR000182 GNAT domain UP17_21200 8f4798633f95f3a2584657a5bf082ffa 183 Gene3D G3DSA:3.40.630.30 4 179 2.3E-46 T 11-10-2018 UP17_21200 8f4798633f95f3a2584657a5bf082ffa 183 SUPERFAMILY SSF55729 9 178 7.42E-47 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_04820 01974a53d1fc25113a8d68a0b7836e7f 62 SUPERFAMILY SSF56235 2 57 5.79E-9 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal UP17_04820 01974a53d1fc25113a8d68a0b7836e7f 62 Pfam PF01019 Gamma-glutamyltranspeptidase 1 57 3.6E-9 T 11-10-2018 UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 180 405 2.3E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 Gene3D G3DSA:2.40.50.100 2 94 3.5E-23 T 11-10-2018 UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 Pfam PF02817 e3 binding domain 118 152 1.6E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 SUPERFAMILY SSF51230 1 83 6.54E-22 T 11-10-2018 IPR011053 Single hybrid motif UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 Gene3D G3DSA:4.10.320.10 113 157 7.2E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 Pfam PF00364 Biotin-requiring enzyme 4 76 1.6E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 Gene3D G3DSA:3.30.559.10 166 404 1.7E-85 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 SUPERFAMILY SSF52777 179 405 1.47E-79 T 11-10-2018 UP17_11935 b84197c7caf1ef8252db2c6c6f5fb740 406 SUPERFAMILY SSF47005 111 156 6.15E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 UP17_03660 06e84299d692545962a035992128b8e4 264 Pfam PF13349 Putative adhesin 46 262 1.0E-19 T 11-10-2018 IPR025164 Putative adhesin UP17_21525 93f0a88411a2ff309cb80923e33811e6 445 Pfam PF02386 Cation transport protein 37 427 2.0E-58 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 UP17_21525 93f0a88411a2ff309cb80923e33811e6 445 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 28 416 2.6E-112 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 UP17_04220 438415b9452826ab19e632afc41b7269 688 Pfam PF00999 Sodium/hydrogen exchanger family 8 430 2.9E-55 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 UP17_04220 438415b9452826ab19e632afc41b7269 688 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 11 439 8.1E-90 T 11-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 UP17_03385 2387ff12b296f5403a060a50e4b88d36 363 Pfam PF13343 Bacterial extracellular solute-binding protein 94 337 2.3E-37 T 11-10-2018 UP17_03385 2387ff12b296f5403a060a50e4b88d36 363 PIRSF PIRSF002825 1 355 1.8E-73 T 11-10-2018 IPR026045 Ferric binding protein UP17_03385 2387ff12b296f5403a060a50e4b88d36 363 Gene3D G3DSA:3.40.190.10 50 323 2.3E-89 T 11-10-2018 UP17_03385 2387ff12b296f5403a060a50e4b88d36 363 Gene3D G3DSA:3.40.190.10 148 337 2.3E-89 T 11-10-2018 UP17_03385 2387ff12b296f5403a060a50e4b88d36 363 SUPERFAMILY SSF53850 47 352 1.01E-73 T 11-10-2018 UP17_21125 e14a98966e76d34a39d4fe08264cfad9 134 Pfam PF01592 NifU-like N terminal domain 2 115 3.3E-25 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 UP17_21125 e14a98966e76d34a39d4fe08264cfad9 134 SUPERFAMILY SSF82649 4 118 8.89E-32 T 11-10-2018 UP17_21125 e14a98966e76d34a39d4fe08264cfad9 134 Gene3D G3DSA:3.90.1010.10 1 133 1.2E-37 T 11-10-2018 UP17_17920 8e9aebacbf6957f2dd0dd453fdd47932 135 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 2.1E-15 T 11-10-2018 IPR007140 Protein of unknown function DUF350 UP17_17920 8e9aebacbf6957f2dd0dd453fdd47932 135 Pfam PF03994 Domain of Unknown Function (DUF350) 18 68 1.5E-13 T 11-10-2018 IPR007140 Protein of unknown function DUF350 UP17_03555 f672e8d4ecc6a2d96d41d2fa3642c148 96 Pfam PF12823 Domain of unknown function (DUF3817) 7 92 2.8E-22 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane UP17_03555 f672e8d4ecc6a2d96d41d2fa3642c148 96 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 9 92 4.7E-26 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane UP17_10105 b71b5b648f5497f4ccce4cb152cc6f45 194 Pfam PF11579 Protein of unknown function (DUF3238) 1 192 4.6E-114 T 11-10-2018 IPR021631 Protein of unknown function DUF3238 UP17_24435 f7ab9d6f6fa65307dc9523cf9bfe0b23 122 Pfam PF04241 Protein of unknown function (DUF423) 18 104 1.8E-33 T 11-10-2018 IPR006696 Protein of unknown function DUF423 UP17_20585 8466a70daeb80374245396075387a577 648 Gene3D G3DSA:3.40.50.720 170 333 3.0E-13 T 11-10-2018 UP17_20585 8466a70daeb80374245396075387a577 648 TIGRFAM TIGR03693 ocin_ThiF_like: putative thiazole-containing bacteriocin maturation protein 1 646 2.2E-231 T 11-10-2018 IPR022368 Putative thiazole-containing bacteriocin maturation protein UP17_15705 5468c8e3bb7aa09c678b04585a0306ca 289 Pfam PF06207 Protein of unknown function (DUF1002) 35 252 1.2E-77 T 11-10-2018 IPR009343 Protein of unknown function DUF1002 UP17_25005 093fde65a6c48dea8b11c48e1605dd13 253 Pfam PF13614 AAA domain 2 178 2.2E-71 T 11-10-2018 IPR025669 AAA domain UP17_25005 093fde65a6c48dea8b11c48e1605dd13 253 Gene3D G3DSA:3.40.50.300 1 252 2.7E-82 T 11-10-2018 UP17_25005 093fde65a6c48dea8b11c48e1605dd13 253 SUPERFAMILY SSF52540 3 251 5.91E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_24695 2f20080d1867449fcb9f9ea4e480f935 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 217 7.6E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_24695 2f20080d1867449fcb9f9ea4e480f935 221 SUPERFAMILY SSF161098 16 205 1.83E-47 T 11-10-2018 IPR035906 MetI-like superfamily UP17_24695 2f20080d1867449fcb9f9ea4e480f935 221 Gene3D G3DSA:1.10.3720.10 6 219 1.4E-56 T 11-10-2018 IPR035906 MetI-like superfamily UP17_24695 2f20080d1867449fcb9f9ea4e480f935 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 111 2.3E-27 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 UP17_14330 a444274cb982e9675d95c9c916830ce7 280 Gene3D G3DSA:3.40.50.1110 22 257 8.7E-38 T 11-10-2018 IPR036514 SGNH hydrolase superfamily UP17_14330 a444274cb982e9675d95c9c916830ce7 280 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 250 2.1E-28 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain UP17_14330 a444274cb982e9675d95c9c916830ce7 280 SUPERFAMILY SSF52266 50 259 3.81E-37 T 11-10-2018 UP17_24235 60f0e4fd3d6634b4ee0d556b7ceb24c5 293 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 6 170 9.5E-62 T 11-10-2018 IPR014202 Sporulation stage II, protein R UP17_24235 60f0e4fd3d6634b4ee0d556b7ceb24c5 293 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 40 165 6.2E-47 T 11-10-2018 IPR014202 Sporulation stage II, protein R UP17_05915 5b7f05fa02a70a2eb5028319b6c960f1 370 Pfam PF07883 Cupin domain 102 169 3.3E-19 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_05915 5b7f05fa02a70a2eb5028319b6c960f1 370 Pfam PF07883 Cupin domain 270 329 4.4E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel UP17_05915 5b7f05fa02a70a2eb5028319b6c960f1 370 SUPERFAMILY SSF51182 12 359 3.99E-102 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily UP17_05915 5b7f05fa02a70a2eb5028319b6c960f1 370 Gene3D G3DSA:2.60.120.10 9 363 5.5E-117 T 11-10-2018 IPR014710 RmlC-like jelly roll fold UP17_17170 eae22658e9dc4f06fda0e12877af1d0d 382 Pfam PF14907 Uncharacterised nucleotidyltransferase 41 287 1.7E-60 T 11-10-2018 IPR039498 Uncharacterised nucleotidyltransferase UP17_17170 eae22658e9dc4f06fda0e12877af1d0d 382 SUPERFAMILY SSF81301 131 248 5.89E-7 T 11-10-2018 UP17_06035 144448cf2bf7f6b81a89dc7cb3ff3ae3 134 Gene3D G3DSA:1.10.490.10 1 131 8.1E-48 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 UP17_06035 144448cf2bf7f6b81a89dc7cb3ff3ae3 134 Pfam PF01152 Bacterial-like globin 9 121 5.8E-27 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 UP17_06035 144448cf2bf7f6b81a89dc7cb3ff3ae3 134 SUPERFAMILY SSF46458 7 123 3.4E-36 T 11-10-2018 IPR009050 Globin-like superfamily UP17_23095 c9841d0801f92e057b3cb06e486dae4f 249 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 142 231 1.9E-29 T 11-10-2018 IPR014197 Sporulation protein YunB UP17_23095 c9841d0801f92e057b3cb06e486dae4f 249 PIRSF PIRSF021383 3 245 1.3E-58 T 11-10-2018 IPR014197 Sporulation protein YunB UP17_23095 c9841d0801f92e057b3cb06e486dae4f 249 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 18 235 5.5E-50 T 11-10-2018 IPR014197 Sporulation protein YunB UP17_24750 eee94202bdc064a802e6ac9ce6781cf9 148 Pfam PF12821 Threonine/Serine exporter, ThrE 4 131 1.5E-39 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE UP17_03925 a05c321ba1548522139f89b90d446049 117 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 1 113 8.0E-49 T 11-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 UP17_03925 a05c321ba1548522139f89b90d446049 117 Pfam PF11023 Zinc-ribbon containing domain 3 113 1.6E-60 T 11-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 UP17_03925 a05c321ba1548522139f89b90d446049 117 Hamap MF_01502 UPF0295 protein . 1 115 36.09 T 11-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 UP17_17560 b1b9572e4a56aa6d6ae6b010075a2dec 227 SUPERFAMILY SSF63848 106 210 1.28E-28 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 UP17_17560 b1b9572e4a56aa6d6ae6b010075a2dec 227 Gene3D G3DSA:3.30.160.540 7 87 3.3E-30 T 11-10-2018 UP17_17560 b1b9572e4a56aa6d6ae6b010075a2dec 227 Gene3D G3DSA:2.160.20.70 101 225 2.8E-36 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 UP17_17560 b1b9572e4a56aa6d6ae6b010075a2dec 227 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 211 21.286 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 UP17_17560 b1b9572e4a56aa6d6ae6b010075a2dec 227 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 210 3.3E-35 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 UP17_17560 b1b9572e4a56aa6d6ae6b010075a2dec 227 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 207 4.3E-28 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 UP17_24015 6c1f4ec2c82e4f9069efa9678f703e70 144 Pfam PF14183 YwpF-like protein 2 133 7.4E-39 T 11-10-2018 IPR025573 YwpF-like protein UP17_01665 a64fc565a46397dbf7604e8bbab9af1f 202 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 32 172 1.5E-8 T 11-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 UP17_14615 968c8d7eb8f8d5281d2781da54a0cc51 393 Pfam PF00999 Sodium/hydrogen exchanger family 6 387 7.0E-63 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 UP17_14615 968c8d7eb8f8d5281d2781da54a0cc51 393 Gene3D G3DSA:1.20.1530.20 1 390 7.4E-13 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily UP17_13710 46b855ed62e91352ad769abd6cc493aa 487 Pfam PF02435 Levansucrase/Invertase 41 485 1.1E-145 T 11-10-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 UP17_13710 46b855ed62e91352ad769abd6cc493aa 487 Gene3D G3DSA:2.115.10.20 31 482 1.2E-166 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily UP17_13710 46b855ed62e91352ad769abd6cc493aa 487 SUPERFAMILY SSF75005 38 486 7.85E-89 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily UP17_11695 a0bb2f278593d13a5d24f5f895376e1e 66 Pfam PF11755 Protein of unknown function (DUF3311) 7 61 2.3E-17 T 11-10-2018 IPR021741 Protein of unknown function DUF3311 UP17_08560 588068b322ef362facfafb98b78222f0 236 Pfam PF04239 Protein of unknown function (DUF421) 88 204 7.7E-33 T 11-10-2018 IPR007353 Protein of unknown function DUF421 UP17_08560 588068b322ef362facfafb98b78222f0 236 Gene3D G3DSA:3.30.240.20 169 228 5.0E-17 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_08560 588068b322ef362facfafb98b78222f0 236 Gene3D G3DSA:3.30.240.20 81 162 6.1E-23 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily UP17_19915 7a52ea6c88145ce518b68993bf2b894e 287 Pfam PF01048 Phosphorylase superfamily 39 273 7.2E-37 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 UP17_19915 7a52ea6c88145ce518b68993bf2b894e 287 SUPERFAMILY SSF53167 35 284 7.72E-44 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 UP17_19915 7a52ea6c88145ce518b68993bf2b894e 287 Gene3D G3DSA:3.40.50.1580 35 286 1.2E-79 T 11-10-2018 UP17_10290 c705df942565995e5e5f81b64b9df6c6 369 Gene3D G3DSA:3.30.300.210 213 367 7.4E-26 T 11-10-2018 IPR038501 Spore germination GerAC superfamily UP17_10290 c705df942565995e5e5f81b64b9df6c6 369 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 364 1.5E-28 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_10290 c705df942565995e5e5f81b64b9df6c6 369 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 366 6.4E-65 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 UP17_05740 131805eefab53d9185db877234ac5787 70 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 59 4.0E-12 T 11-10-2018 IPR024255 Spore germination GerPB UP17_05740 131805eefab53d9185db877234ac5787 70 Pfam PF10803 Spore germination GerPB 1 51 2.4E-26 T 11-10-2018 IPR024255 Spore germination GerPB UP17_09685 549766dd937c2743be3e612b434b89d9 306 Pfam PF01734 Patatin-like phospholipase 6 196 1.2E-27 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 UP17_09685 549766dd937c2743be3e612b434b89d9 306 Gene3D G3DSA:3.40.1090.10 2 117 1.3E-23 T 11-10-2018 UP17_09685 549766dd937c2743be3e612b434b89d9 306 SUPERFAMILY SSF52151 6 294 5.23E-41 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase UP17_15280 84944bddb35b5c091c05e682d8b7b97b 379 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 3 373 4.2E-172 T 11-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 UP17_15280 84944bddb35b5c091c05e682d8b7b97b 379 Gene3D G3DSA:3.40.50.2000 175 356 4.0E-119 T 11-10-2018 UP17_15280 84944bddb35b5c091c05e682d8b7b97b 379 Pfam PF00534 Glycosyl transferases group 1 188 351 1.9E-42 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 UP17_15280 84944bddb35b5c091c05e682d8b7b97b 379 Pfam PF13439 Glycosyltransferase Family 4 13 177 1.2E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 UP17_15280 84944bddb35b5c091c05e682d8b7b97b 379 SUPERFAMILY SSF53756 8 374 3.02E-85 T 11-10-2018 UP17_15280 84944bddb35b5c091c05e682d8b7b97b 379 Gene3D G3DSA:3.40.50.2000 22 369 4.0E-119 T 11-10-2018 UP17_03785 76754ce7dfcc0fe4cfceeec360c9c720 325 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 165 4.7E-27 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase UP17_18355 ae0bebaa7db01e0298d92117c0db58a8 94 SUPERFAMILY SSF89957 3 93 1.31E-23 T 11-10-2018 IPR029756 MTH1187/YkoF-like UP17_18355 ae0bebaa7db01e0298d92117c0db58a8 94 Pfam PF01910 Thiamine-binding protein 7 91 9.2E-22 T 11-10-2018 IPR002767 Thiamine-binding protein UP17_18355 ae0bebaa7db01e0298d92117c0db58a8 94 Gene3D G3DSA:3.30.70.930 2 94 1.9E-28 T 11-10-2018 IPR029756 MTH1187/YkoF-like UP17_14190 55ff38c697c3ec64164f687a0cf9f140 295 Gene3D G3DSA:1.10.260.150 40 295 1.4E-69 T 11-10-2018 UP17_14190 55ff38c697c3ec64164f687a0cf9f140 295 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 62 205 8.0E-42 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_14190 55ff38c697c3ec64164f687a0cf9f140 295 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 62 205 5.2E-32 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain UP17_00140 d1949cf01d152cbccb7794891cea7776 87 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 6 85 7.3E-24 T 11-10-2018 IPR010001 SigmaK-factor processing regulatory BofA UP17_00140 d1949cf01d152cbccb7794891cea7776 87 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 12 85 8.0E-20 T 11-10-2018 IPR010001 SigmaK-factor processing regulatory BofA UP17_16500 7010b5c1ba862795743d620db14a594d 151 Pfam PF02618 YceG-like family 90 150 6.0E-7 T 11-10-2018 IPR003770 Endolytic murein transglycosylase UP17_16500 7010b5c1ba862795743d620db14a594d 151 Gene3D G3DSA:1.10.8.1150 85 151 1.3E-9 T 11-10-2018 UP17_10130 bb0226814a955d40b9af39a1179e31da 322 Pfam PF03601 Conserved hypothetical protein 698 4 306 8.3E-78 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 UP17_17130 72480071e3ea234e9fab0fea1a003455 160 Pfam PF13471 Transglutaminase-like superfamily 48 143 4.9E-20 T 11-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal UP17_09355 cf1064bc979f1c53609c40357b190c5c 128 SMART SM00914 63 98 6.2E-4 T 11-10-2018 IPR014957 IDEAL domain UP17_09355 cf1064bc979f1c53609c40357b190c5c 128 Pfam PF08858 IDEAL domain 72 98 6.2E-6 T 11-10-2018 IPR014957 IDEAL domain UP17_17245 0292e76de3c3f8fa415405e6fc0c12c8 254 Gene3D G3DSA:3.20.20.140 1 254 2.2E-87 T 11-10-2018 UP17_17245 0292e76de3c3f8fa415405e6fc0c12c8 254 SUPERFAMILY SSF89550 2 205 5.1E-14 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 UP17_17245 0292e76de3c3f8fa415405e6fc0c12c8 254 PIRSF PIRSF016557 1 254 1.2E-95 T 11-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UP17_14885 5d568a39916634ccf1d06cd42d0600e1 82 Gene3D G3DSA:2.40.50.100 3 75 6.0E-6 T 11-10-2018 UP17_13685 12434df33b4b5543a2ee3f83f5518eca 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 317 9.9E-51 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 UP17_12060 7532c922a752ccf7e994c53b418754f7 269 SUPERFAMILY SSF161098 8 259 3.64E-54 T 11-10-2018 IPR035906 MetI-like superfamily UP17_12060 7532c922a752ccf7e994c53b418754f7 269 Gene3D G3DSA:1.10.3720.10 5 261 4.1E-52 T 11-10-2018 IPR035906 MetI-like superfamily UP17_12060 7532c922a752ccf7e994c53b418754f7 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 249 2.2E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_21210 f4b00f044431a3d5ce2dd230e19d72dc 155 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 127 1.7E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain UP17_21210 f4b00f044431a3d5ce2dd230e19d72dc 155 SUPERFAMILY SSF54593 1 137 2.48E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_21210 f4b00f044431a3d5ce2dd230e19d72dc 155 Gene3D G3DSA:3.10.180.10 5 149 4.4E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_11385 ec29d5b86a3474613f708698edb783ad 152 SUPERFAMILY SSF47413 7 65 9.38E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_11385 ec29d5b86a3474613f708698edb783ad 152 Gene3D G3DSA:1.10.260.40 3 67 6.0E-8 T 11-10-2018 UP17_25510 cbea9b21955be1ff4917acead462e046 316 Pfam PF00487 Fatty acid desaturase 38 273 3.3E-33 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 UP17_11355 e913f99fbf977aac90b71abf9ecb86df 152 SUPERFAMILY SSF55729 1 138 2.27E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_11355 e913f99fbf977aac90b71abf9ecb86df 152 Pfam PF13673 Acetyltransferase (GNAT) domain 42 150 9.7E-12 T 11-10-2018 IPR000182 GNAT domain UP17_11355 e913f99fbf977aac90b71abf9ecb86df 152 Gene3D G3DSA:3.40.630.30 1 138 6.1E-19 T 11-10-2018 UP17_00265 d6427ed8b07ecd1d6c0537667b4071fe 58 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 13 22 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_00265 d6427ed8b07ecd1d6c0537667b4071fe 58 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 10 54 7.0E-5 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 UP17_14435 c7d9616260d3803ee78c552203069445 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 279 4.7E-73 T 11-10-2018 IPR003797 DegV UP17_14435 c7d9616260d3803ee78c552203069445 281 SUPERFAMILY SSF82549 3 280 2.41E-75 T 11-10-2018 UP17_14435 c7d9616260d3803ee78c552203069445 281 Gene3D G3DSA:3.30.1180.10 153 279 8.2E-30 T 11-10-2018 UP17_14435 c7d9616260d3803ee78c552203069445 281 Gene3D G3DSA:3.40.50.10170 1 149 7.3E-43 T 11-10-2018 UP17_14435 c7d9616260d3803ee78c552203069445 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 277 1.0E-78 T 11-10-2018 IPR003797 DegV UP17_05640 7da79504a7a0a75a503712e721a59d97 244 SMART SM00849 18 211 5.2E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_05640 7da79504a7a0a75a503712e721a59d97 244 SUPERFAMILY SSF56281 1 243 7.73E-57 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_05640 7da79504a7a0a75a503712e721a59d97 244 Gene3D G3DSA:3.60.15.10 1 243 2.2E-84 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_05640 7da79504a7a0a75a503712e721a59d97 244 Pfam PF12706 Beta-lactamase superfamily domain 30 211 6.9E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_14570 2f81ddcfc8cf2cec146eb3041b9458f9 66 Pfam PF11755 Protein of unknown function (DUF3311) 7 62 9.0E-19 T 11-10-2018 IPR021741 Protein of unknown function DUF3311 UP17_17975 83e063d84b7d22731768ce98d5e516d2 260 Pfam PF11181 Heat induced stress protein YflT 6 108 3.1E-18 T 11-10-2018 IPR025889 General stress protein 17M-like domain UP17_01850 4c1f3e34354f9c0b19a1227942fd1e9a 147 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 11 137 2.2E-17 T 11-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC UP17_01850 4c1f3e34354f9c0b19a1227942fd1e9a 147 ProDom PD090911 YUEC MEMBRANE TRANSMEMBRANE 1 137 4.0E-15 T 11-10-2018 IPR020212 ESX secretion system protein YueC UP17_01850 4c1f3e34354f9c0b19a1227942fd1e9a 147 Pfam PF17355 Family of unknown function (DUF5383) 17 138 4.5E-32 T 11-10-2018 IPR020212 ESX secretion system protein YueC UP17_15065 ef2b525a4f2bbb6885198336ab572c14 362 Gene3D G3DSA:3.40.47.10 3 212 3.0E-58 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_15065 ef2b525a4f2bbb6885198336ab572c14 362 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 226 360 2.8E-19 T 11-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal UP17_15065 ef2b525a4f2bbb6885198336ab572c14 362 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 64 206 2.0E-15 T 11-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal UP17_15065 ef2b525a4f2bbb6885198336ab572c14 362 PIRSF PIRSF000451 1 362 7.6E-115 T 11-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 UP17_15065 ef2b525a4f2bbb6885198336ab572c14 362 SUPERFAMILY SSF53901 14 361 1.23E-43 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_15065 ef2b525a4f2bbb6885198336ab572c14 362 Gene3D G3DSA:3.40.47.10 219 362 1.8E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 UP17_07375 a93fb4cdf6964c559d243751c360a317 275 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 269 8.8E-61 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase UP17_07375 a93fb4cdf6964c559d243751c360a317 275 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 268 1.2E-70 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase UP17_07375 a93fb4cdf6964c559d243751c360a317 275 Gene3D G3DSA:3.60.140.10 4 275 9.9E-89 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily UP17_07375 a93fb4cdf6964c559d243751c360a317 275 SUPERFAMILY SSF64438 12 272 1.21E-78 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic UP17_12155 5bbebf2cb2c559b6818cd94e6ac7d60c 130 Pfam PF07070 SpoOM protein 3 128 3.5E-17 T 11-10-2018 IPR009776 Sporulation stage 0, protein M UP17_20770 13940d3329783b6168692573b95f5e72 143 Pfam PF07849 Protein of unknown function (DUF1641) 101 124 1.3E-5 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 UP17_05090 caca5de25e138c0ed99711a5e59a0fd2 435 TIGRFAM TIGR00784 citMHS: citrate transporter 1 435 7.7E-168 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 UP17_05090 caca5de25e138c0ed99711a5e59a0fd2 435 Pfam PF03600 Citrate transporter 14 377 1.4E-40 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 UP17_22820 dafedbc12703e90025879a931c5947dd 86 Gene3D G3DSA:1.10.340.20 1 86 9.0E-36 T 11-10-2018 IPR023162 Apc36109-like domain superfamily UP17_22820 dafedbc12703e90025879a931c5947dd 86 Pfam PF08958 Domain of unknown function (DUF1871) 10 85 2.8E-29 T 11-10-2018 IPR015053 Protein of unknown function DUF1871 UP17_22820 dafedbc12703e90025879a931c5947dd 86 SUPERFAMILY SSF116922 4 82 7.45E-24 T 11-10-2018 IPR023162 Apc36109-like domain superfamily UP17_22820 dafedbc12703e90025879a931c5947dd 86 ProDom PD062625 YUGE 10 84 2.0E-13 T 11-10-2018 IPR015053 Protein of unknown function DUF1871 UP17_03780 b049eeeeb8935c71b95f9dc03ec2f62a 88 Pfam PF14043 WVELL protein 3 76 3.1E-37 T 11-10-2018 IPR026952 WVELL protein UP17_07025 55881dab22b4ef63ed1d059d4f48cfa8 204 SUPERFAMILY SSF51366 1 197 4.24E-52 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 UP17_07025 55881dab22b4ef63ed1d059d4f48cfa8 204 Gene3D G3DSA:3.20.20.70 1 198 1.9E-64 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 UP17_07025 55881dab22b4ef63ed1d059d4f48cfa8 204 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 194 3.1E-48 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 UP17_07025 55881dab22b4ef63ed1d059d4f48cfa8 204 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 199 35.934 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 UP17_04775 ac3f1276ad5f06feb52127703637325e 183 Pfam PF09335 SNARE associated Golgi protein 32 147 3.1E-19 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_24950 586f9bfccb17e10f62336fe462f44bdc 315 Pfam PF09991 Predicted membrane protein (DUF2232) 15 303 4.4E-62 T 11-10-2018 IPR018710 Protein of unknown function DUF2232 UP17_04385 4b1ce21e53f086d96685ab02338c070c 633 Pfam PF13515 Fusaric acid resistance protein-like 350 475 4.0E-25 T 11-10-2018 UP17_08855 63a5d8f92e83163161cf703f156bf5b4 473 Pfam PF03553 Na+/H+ antiporter family 158 450 3.5E-64 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 UP17_08855 63a5d8f92e83163161cf703f156bf5b4 473 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 455 1.4E-140 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 UP17_23350 238f7bf39ef8001a1557965698d04795 348 Pfam PF00487 Fatty acid desaturase 49 288 3.8E-39 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 UP17_24440 46dd7a2136b7518aef2e8705d7cb1aae 87 ProDom PD705231 YWDI GROUP-SPECIFIC 1 87 4.0E-7 T 11-10-2018 IPR035218 Protein of unknown function DUF5327 UP17_24440 46dd7a2136b7518aef2e8705d7cb1aae 87 Pfam PF17261 Family of unknown function (DUF5327) 2 87 7.2E-14 T 11-10-2018 IPR035218 Protein of unknown function DUF5327 UP17_07100 e92bbad1dff84384d46791c566f01453 93 Hamap MF_01560 UPF0358 protein . 3 93 27.414 T 11-10-2018 IPR009983 Uncharacterised protein family UPF0358 UP17_07100 e92bbad1dff84384d46791c566f01453 93 Gene3D G3DSA:1.10.287.750 4 92 1.4E-36 T 11-10-2018 IPR036270 UPF0358 superfamily UP17_07100 e92bbad1dff84384d46791c566f01453 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 90 1.1E-41 T 11-10-2018 IPR009983 Uncharacterised protein family UPF0358 UP17_07100 e92bbad1dff84384d46791c566f01453 93 SUPERFAMILY SSF140404 6 84 1.09E-36 T 11-10-2018 IPR036270 UPF0358 superfamily UP17_01550 f51b4fbe0b645cf17478ef51323f567c 70 Pfam PF14146 Domain of unknown function (DUF4305) 19 55 3.3E-13 T 11-10-2018 IPR025426 Protein of unknown function DUF4305 UP17_17115 12e925f6a84dde52eca7d9c119619a1f 161 Pfam PF04892 VanZ like family 10 153 4.8E-19 T 11-10-2018 IPR006976 VanZ-like UP17_17115 12e925f6a84dde52eca7d9c119619a1f 161 PIRSF PIRSF019083 1 160 3.3E-44 T 11-10-2018 IPR016747 Phosphotransbutyrylase UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 SUPERFAMILY SSF47729 1 90 7.36E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.4E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.1E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.1E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.1E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 SMART SM00411 1 90 3.4E-51 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 UP17_15425 ec3ff12a4c8519919f66747a2547d639 90 Gene3D G3DSA:4.10.520.10 1 90 8.3E-40 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 UP17_01520 d50177703f598662b4590f090e80ebd0 230 Pfam PF00814 Glycoprotease family 32 198 5.6E-32 T 11-10-2018 IPR000905 Gcp-like domain UP17_01520 d50177703f598662b4590f090e80ebd0 230 Gene3D G3DSA:3.30.420.40 3 216 4.1E-49 T 11-10-2018 UP17_01520 d50177703f598662b4590f090e80ebd0 230 Gene3D G3DSA:3.30.420.40 95 189 4.1E-49 T 11-10-2018 UP17_01520 d50177703f598662b4590f090e80ebd0 230 SUPERFAMILY SSF53067 3 107 2.68E-27 T 11-10-2018 UP17_01520 d50177703f598662b4590f090e80ebd0 230 SUPERFAMILY SSF53067 108 214 7.64E-14 T 11-10-2018 UP17_01520 d50177703f598662b4590f090e80ebd0 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 1.9E-49 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 UP17_21420 2b50478e0715bf35fb2e03f7eba02922 444 Pfam PF05525 Branched-chain amino acid transport protein 10 433 3.4E-161 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_21420 2b50478e0715bf35fb2e03f7eba02922 444 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 421 7.0E-154 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_25165 522cadc063476204979d19718e992cac 142 SUPERFAMILY SSF46689 29 133 8.15E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_14310 c9e531bbdeaa65e59b53a0bb65d80bcf 142 Pfam PF01641 SelR domain 6 125 5.3E-50 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 UP17_14310 c9e531bbdeaa65e59b53a0bb65d80bcf 142 Gene3D G3DSA:2.170.150.20 1 142 1.1E-60 T 11-10-2018 UP17_14310 c9e531bbdeaa65e59b53a0bb65d80bcf 142 SUPERFAMILY SSF51316 2 141 1.05E-59 T 11-10-2018 IPR011057 Mss4-like superfamily UP17_14310 c9e531bbdeaa65e59b53a0bb65d80bcf 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 2 133 3.9E-66 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 UP17_14310 c9e531bbdeaa65e59b53a0bb65d80bcf 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 126 37.088 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 UP17_13445 76e621a235a05e6b7525b16040a29873 202 Gene3D G3DSA:3.40.50.1820 1 200 1.4E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_13445 76e621a235a05e6b7525b16040a29873 202 SUPERFAMILY SSF53474 2 199 2.11E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_13445 76e621a235a05e6b7525b16040a29873 202 Pfam PF01738 Dienelactone hydrolase family 80 183 1.0E-9 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 UP17_21925 ab62dcd1ac32b347341dcd13736650ce 443 Pfam PF05525 Branched-chain amino acid transport protein 10 433 1.3E-158 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_21925 ab62dcd1ac32b347341dcd13736650ce 443 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 421 8.6E-152 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 UP17_20105 56d0eafe81f15945247ed92543f25bc2 152 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 5 147 1.9E-6 T 11-10-2018 IPR019587 Polyketide cyclase/dehydrase UP17_20105 56d0eafe81f15945247ed92543f25bc2 152 Gene3D G3DSA:3.30.530.20 3 150 1.6E-9 T 11-10-2018 IPR023393 START-like domain superfamily UP17_20105 56d0eafe81f15945247ed92543f25bc2 152 SUPERFAMILY SSF55961 3 140 4.13E-12 T 11-10-2018 UP17_05830 5eec0fc89ed1508d6180d0d43f6bb94c 63 Pfam PF12758 Protein of unknown function (DUF3813) 1 61 5.0E-23 T 11-10-2018 IPR024217 Protein of unknown function DUF3813 UP17_08600 916ff2759a39987218ad49e5bd8680e4 117 Pfam PF03318 Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 1 91 1.1E-5 T 11-10-2018 IPR004991 Aerolysin-like toxin UP17_19870 03d0e02440b69040b211995d598bf6f6 71 Pfam PF11148 Protein of unknown function (DUF2922) 3 68 5.1E-20 T 11-10-2018 IPR021321 Protein of unknown function DUF2922 UP17_12910 a5c38c155cb981f1169452fcca4cce53 104 Pfam PF10842 Protein of unknown function (DUF2642) 50 92 1.1E-5 T 11-10-2018 IPR020139 Protein of unknown function DUF2642 UP17_00315 a469b937a47b7b6d466ae530b2c0359a 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 1.3E-33 T 11-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 UP17_00315 a469b937a47b7b6d466ae530b2c0359a 76 ProDom PD057826 YABK 4 75 4.0E-19 T 11-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 UP17_12800 0835b5e6178cc553eef9811e17d46c46 259 SUPERFAMILY SSF46565 201 256 2.36E-7 T 11-10-2018 IPR036869 Chaperone J-domain superfamily UP17_12800 0835b5e6178cc553eef9811e17d46c46 259 Gene3D G3DSA:1.10.287.110 195 258 9.0E-7 T 11-10-2018 IPR036869 Chaperone J-domain superfamily UP17_12885 676c1ea6ec78ac9f97231433435d2ce0 337 Pfam PF00723 Glycosyl hydrolases family 15 17 291 4.6E-19 T 11-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 UP17_12885 676c1ea6ec78ac9f97231433435d2ce0 337 SUPERFAMILY SSF48208 12 324 4.97E-47 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 UP17_12885 676c1ea6ec78ac9f97231433435d2ce0 337 Gene3D G3DSA:1.50.10.10 3 335 1.6E-30 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 UP17_10795 aba0eec1010a4bc103f96aaa1d8cd0d2 404 Gene3D G3DSA:1.20.1250.20 4 183 7.5E-17 T 11-10-2018 UP17_10795 aba0eec1010a4bc103f96aaa1d8cd0d2 404 Gene3D G3DSA:1.20.1250.20 203 383 9.5E-29 T 11-10-2018 UP17_10795 aba0eec1010a4bc103f96aaa1d8cd0d2 404 Pfam PF07690 Major Facilitator Superfamily 10 292 2.2E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_10795 aba0eec1010a4bc103f96aaa1d8cd0d2 404 SUPERFAMILY SSF103473 3 382 7.59E-46 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_14690 071dff33191250069d7cf08d0e588b41 309 Gene3D G3DSA:3.60.15.10 27 308 1.1E-61 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_14690 071dff33191250069d7cf08d0e588b41 309 Pfam PF12706 Beta-lactamase superfamily domain 57 264 5.7E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_14690 071dff33191250069d7cf08d0e588b41 309 SUPERFAMILY SSF56281 28 300 6.68E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like UP17_14690 071dff33191250069d7cf08d0e588b41 309 SMART SM00849 44 254 1.0E-6 T 11-10-2018 IPR001279 Metallo-beta-lactamase UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 Gene3D G3DSA:1.20.1250.20 12 193 1.9E-25 T 11-10-2018 UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 Pfam PF07690 Major Facilitator Superfamily 16 238 3.7E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 Pfam PF07690 Major Facilitator Superfamily 244 389 6.3E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 Gene3D G3DSA:1.20.1250.20 209 395 6.7E-19 T 11-10-2018 UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 SUPERFAMILY SSF103473 6 389 1.26E-55 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 PRINTS PR01036 Tetracycline resistance protein TetB signature 75 97 6.8E-5 T 11-10-2018 UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 6.8E-5 T 11-10-2018 UP17_21005 2683e7ee1135d9ec1a9d6ef9ae918180 399 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 6.8E-5 T 11-10-2018 UP17_13550 6b284285f3f1a74329161445bf8e544b 304 SMART SM00382 30 219 5.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain UP17_13550 6b284285f3f1a74329161445bf8e544b 304 Pfam PF00005 ABC transporter 22 162 3.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 UP17_13550 6b284285f3f1a74329161445bf8e544b 304 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 UP17_13550 6b284285f3f1a74329161445bf8e544b 304 Gene3D G3DSA:3.40.50.300 1 234 2.7E-63 T 11-10-2018 UP17_13550 6b284285f3f1a74329161445bf8e544b 304 SUPERFAMILY SSF52540 4 229 7.46E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_09810 8f574ae6460cd35fcf3344a3cc752b36 307 Pfam PF00892 EamA-like transporter family 8 134 1.1E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09810 8f574ae6460cd35fcf3344a3cc752b36 307 Pfam PF00892 EamA-like transporter family 148 283 3.5E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 UP17_09810 8f574ae6460cd35fcf3344a3cc752b36 307 SUPERFAMILY SSF103481 184 287 3.79E-14 T 11-10-2018 UP17_09810 8f574ae6460cd35fcf3344a3cc752b36 307 SUPERFAMILY SSF103481 37 135 1.31E-14 T 11-10-2018 UP17_05555 51dd347286d8ebb3c2899ac25d51847c 179 Pfam PF11667 Putative zincin peptidase 59 161 2.2E-18 T 11-10-2018 IPR021683 Putative zincin peptidase UP17_16240 d950c6a74547f955e926786b4b242bd8 61 Pfam PF14038 YqzE-like protein 2 54 1.7E-21 T 11-10-2018 IPR025622 YqzE-like protein UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 16 41 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 365 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 144 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 303 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 375 394 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 242 263 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 191 210 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 312 333 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 63 86 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 90 114 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 180 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 425 446 8.3E-103 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 Gene3D G3DSA:1.20.210.10 3 529 1.8E-202 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 25 469 1.8E-146 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 17 520 2.6E-206 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 SUPERFAMILY SSF81442 14 522 2.35E-177 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_07125 4c305121ed74139209e53ae7d84b713b 623 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 244 298 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 UP17_08725 3d7ea762c9f97c3f58be9c08f41f5f27 483 Pfam PF13751 Transposase DDE domain 355 478 9.9E-16 T 11-10-2018 IPR025668 Transposase DDE domain UP17_08725 3d7ea762c9f97c3f58be9c08f41f5f27 483 Pfam PF05598 Transposase domain (DUF772) 52 123 1.4E-19 T 11-10-2018 IPR008490 Transposase InsH, N-terminal UP17_07990 5b7ad96355bd47d8914078e6af257bd1 101 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 96 7.0E-19 T 11-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 UP17_07990 5b7ad96355bd47d8914078e6af257bd1 101 Gene3D G3DSA:3.30.1330.30 1 101 1.1E-38 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_07990 5b7ad96355bd47d8914078e6af257bd1 101 SUPERFAMILY SSF55315 5 100 5.89E-26 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like UP17_20490 0fccae66085100cc4663b1e22dee4bb7 363 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 5 356 4.3E-77 T 11-10-2018 IPR010640 Low temperature requirement A UP17_19220 7ff629bdd5163a233f7f71541d85b09f 208 SUPERFAMILY SSF55811 4 155 6.09E-21 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 UP17_19220 7ff629bdd5163a233f7f71541d85b09f 208 Gene3D G3DSA:3.90.79.10 1 189 9.7E-36 T 11-10-2018 UP17_02200 c106b9e4d62fd3ddef6ad46e867a49ae 270 SUPERFAMILY SSF54631 19 130 3.83E-7 T 11-10-2018 UP17_13310 586dc8dcbd80488b5468ddf0406796c5 290 Pfam PF01925 Sulfite exporter TauE/SafE 8 246 7.1E-42 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 UP17_14070 bc7b52b4da359a0990aca87b99f53227 130 Pfam PF03788 LrgA family 20 110 1.5E-23 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 UP17_06250 8016796ba65f6c445bc88e6dabcc3c59 363 Pfam PF08757 CotH kinase protein 48 355 1.3E-80 T 11-10-2018 IPR014867 Spore coat protein CotH UP17_17080 913039d886bb418572769cc7100ce118 215 ProDom PD210561 YWRJ 6 214 1.0E-43 T 11-10-2018 IPR020173 Uncharacterised protein family YwrJ UP17_08915 ab2bf591e8254bc06eb6a5a239f84d44 447 PIRSF PIRSF006060 1 446 1.8E-84 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_08915 ab2bf591e8254bc06eb6a5a239f84d44 447 Pfam PF13520 Amino acid permease 10 406 1.3E-57 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 UP17_08915 ab2bf591e8254bc06eb6a5a239f84d44 447 Gene3D G3DSA:1.20.1740.10 5 446 1.9E-91 T 11-10-2018 UP17_13695 92c845f8d3ded844f529c3531d13a0dd 326 SUPERFAMILY SSF53822 44 323 2.86E-80 T 11-10-2018 IPR028082 Periplasmic binding protein-like I UP17_13695 92c845f8d3ded844f529c3531d13a0dd 326 Gene3D G3DSA:3.40.50.2300 53 308 6.1E-85 T 11-10-2018 UP17_13695 92c845f8d3ded844f529c3531d13a0dd 326 Pfam PF13407 Periplasmic binding protein domain 48 303 4.8E-61 T 11-10-2018 IPR025997 Periplasmic binding protein UP17_13695 92c845f8d3ded844f529c3531d13a0dd 326 Gene3D G3DSA:3.40.50.2300 145 318 6.1E-85 T 11-10-2018 UP17_22960 67c309cec9557f61ea6a2d1006604130 262 Pfam PF01497 Periplasmic binding protein 3 230 9.7E-27 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain UP17_22960 67c309cec9557f61ea6a2d1006604130 262 Gene3D G3DSA:3.40.50.1980 1 118 2.0E-24 T 11-10-2018 UP17_22960 67c309cec9557f61ea6a2d1006604130 262 SUPERFAMILY SSF53807 2 256 1.22E-53 T 11-10-2018 UP17_22960 67c309cec9557f61ea6a2d1006604130 262 Gene3D G3DSA:3.40.50.1980 122 255 7.9E-25 T 11-10-2018 UP17_03510 088308bd10c7f7f3e4ae62e99f8f8801 88 SUPERFAMILY SSF47336 11 77 8.11E-18 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03510 088308bd10c7f7f3e4ae62e99f8f8801 88 Gene3D G3DSA:1.10.1200.10 11 84 4.2E-22 T 11-10-2018 IPR036736 ACP-like superfamily UP17_03510 088308bd10c7f7f3e4ae62e99f8f8801 88 Pfam PF00550 Phosphopantetheine attachment site 14 75 1.8E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain UP17_04500 c2f339e747071ee553a812c5d636bfcc 340 Gene3D G3DSA:3.90.550.10 2 193 3.9E-26 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_04500 c2f339e747071ee553a812c5d636bfcc 340 SUPERFAMILY SSF53448 3 262 3.09E-25 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases UP17_04500 c2f339e747071ee553a812c5d636bfcc 340 Pfam PF00535 Glycosyl transferase family 2 7 174 4.8E-23 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 UP17_14820 76302f3f33537844dbeaa547cc0928cc 470 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 47 416 5.7E-24 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 UP17_14820 76302f3f33537844dbeaa547cc0928cc 470 Gene3D G3DSA:1.10.4160.10 4 459 2.6E-45 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily UP17_19755 62f7e655bb235416df79d0dad45c34f0 284 Gene3D G3DSA:1.10.260.40 15 86 1.4E-7 T 11-10-2018 UP17_19755 62f7e655bb235416df79d0dad45c34f0 284 Gene3D G3DSA:3.30.450.180 110 280 1.4E-17 T 11-10-2018 UP17_19755 62f7e655bb235416df79d0dad45c34f0 284 SUPERFAMILY SSF47413 31 84 5.0E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 UP17_19755 62f7e655bb235416df79d0dad45c34f0 284 Pfam PF13560 Helix-turn-helix domain 33 88 4.4E-13 T 11-10-2018 UP17_19755 62f7e655bb235416df79d0dad45c34f0 284 SMART SM00530 13 85 0.0026 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 UP17_14860 498866e2b5853ce267ae7aafc10fb494 476 Pfam PF03606 C4-dicarboxylate anaerobic carrier 27 469 2.3E-105 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 UP17_04815 6810c3223f91886267c6d4ab45083a24 185 Pfam PF02417 Chromate transporter 8 173 3.0E-37 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 UP17_13035 d20f2ee09166dd36ca844b77074427e8 244 Pfam PF08892 YqcI/YcgG family 31 239 2.0E-66 T 11-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG UP17_04080 08ad831362bf2186735080e395de41d8 309 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 48 289 1.0E-51 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 UP17_04080 08ad831362bf2186735080e395de41d8 309 Gene3D G3DSA:3.20.20.190 21 304 5.5E-103 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_04080 08ad831362bf2186735080e395de41d8 309 SUPERFAMILY SSF51695 43 295 3.4E-71 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 UP17_18540 e2e8852d5e5a1c0030b00cf6884583b6 105 Pfam PF03413 Peptidase propeptide and YPEB domain 31 99 4.3E-5 T 11-10-2018 IPR025711 PepSY domain UP17_16260 6c9d0a5bf0860d87a04d9436afacfa90 147 PIRSF PIRSF021292 4 147 4.9E-30 T 11-10-2018 IPR016785 ComG operon protein 4 GO:0030420 UP17_14015 a37f9e57e16cf5ae044ba79eb5bdf5bd 216 SUPERFAMILY SSF50800 3 213 1.31E-56 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily UP17_14015 a37f9e57e16cf5ae044ba79eb5bdf5bd 216 Pfam PF03473 MOSC domain 52 161 9.3E-17 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 UP17_14015 a37f9e57e16cf5ae044ba79eb5bdf5bd 216 Gene3D G3DSA:2.40.33.20 1 216 4.2E-58 T 11-10-2018 UP17_06130 985cb5f80fa49940287e2cb60924b112 84 Pfam PF14069 Stage VI sporulation protein F 6 75 2.1E-26 T 11-10-2018 IPR025942 Stage VI sporulation protein F UP17_02655 2ba08c7a41f68ef4d9cb46ca1a2bc0f2 288 PIRSF PIRSF035875 1 283 9.5E-88 T 11-10-2018 IPR017039 Virulence factor BrkB UP17_02655 2ba08c7a41f68ef4d9cb46ca1a2bc0f2 288 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 7 268 5.1E-54 T 11-10-2018 IPR017039 Virulence factor BrkB UP17_02655 2ba08c7a41f68ef4d9cb46ca1a2bc0f2 288 Pfam PF03631 Virulence factor BrkB 17 269 1.5E-73 T 11-10-2018 IPR017039 Virulence factor BrkB UP17_02475 da9f7aecce30ed26f170bed205c7abc5 684 Pfam PF02554 Carbon starvation protein CstA 32 408 1.0E-170 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 UP17_02475 da9f7aecce30ed26f170bed205c7abc5 684 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 5.1E-37 T 11-10-2018 IPR025299 CstA, C-terminal domain UP17_01090 e891cc52838e6b3019247c6df7e65523 543 Pfam PF07905 Purine catabolism regulatory protein-like family 9 128 5.8E-34 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain UP17_01090 e891cc52838e6b3019247c6df7e65523 543 Gene3D G3DSA:1.10.10.2840 393 523 9.6E-16 T 11-10-2018 UP17_01090 e891cc52838e6b3019247c6df7e65523 543 Pfam PF13556 PucR C-terminal helix-turn-helix domain 463 517 5.4E-16 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain UP17_09275 ebe658723d92269bdb9097a7a5e82492 510 Gene3D G3DSA:3.40.50.1820 32 270 2.9E-30 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_09275 ebe658723d92269bdb9097a7a5e82492 510 SUPERFAMILY SSF53474 35 251 4.88E-24 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_06150 dc6a75776e5e708db46885ab46ae73dc 162 Pfam PF07552 Spore Coat Protein X and V domain 41 97 5.9E-19 T 11-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 UP17_06150 dc6a75776e5e708db46885ab46ae73dc 162 Pfam PF07552 Spore Coat Protein X and V domain 104 161 2.9E-19 T 11-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 UP17_23040 5dbbb4d99126a20f8f422ec4f8c04dee 198 Pfam PF03734 L,D-transpeptidase catalytic domain 26 187 1.9E-7 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UP17_07705 da48c56652925ec83aed772afd8819ee 90 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 81 4.4E-20 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 UP17_07705 da48c56652925ec83aed772afd8819ee 90 SUPERFAMILY SSF160544 7 85 1.03E-23 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal UP17_07705 da48c56652925ec83aed772afd8819ee 90 Gene3D G3DSA:3.40.1690.10 6 89 1.2E-25 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal UP17_15580 d5fe1d3e0c88676562606be393a971f2 354 Pfam PF14493 Helix-turn-helix domain 259 348 1.4E-22 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 UP17_15580 d5fe1d3e0c88676562606be393a971f2 354 PIRSF PIRSF021350 3 354 7.9E-95 T 11-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 UP17_13015 568e38f4979b12be2e8fd52e5c06f8fd 332 Gene3D G3DSA:3.20.20.30 1 330 1.3E-91 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 UP17_13015 568e38f4979b12be2e8fd52e5c06f8fd 332 Pfam PF00296 Luciferase-like monooxygenase 1 299 4.7E-35 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 UP17_13015 568e38f4979b12be2e8fd52e5c06f8fd 332 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 327 9.7E-107 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 UP17_13015 568e38f4979b12be2e8fd52e5c06f8fd 332 SUPERFAMILY SSF51679 1 329 2.49E-68 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 UP17_02420 6c7486069d53b7796591c257e41ebb4e 149 Pfam PF10787 Uncharacterised protein from bacillus cereus group 6 141 2.0E-58 T 11-10-2018 IPR019723 Uncharacterised protein, YfmQ UP17_11630 e46af1acd9e033a7831e67ff3bba0d35 110 Gene3D G3DSA:1.20.1270.360 3 109 1.5E-32 T 11-10-2018 UP17_11630 e46af1acd9e033a7831e67ff3bba0d35 110 Pfam PF03860 Domain of Unknown Function (DUF326) 33 50 1.6E-4 T 11-10-2018 IPR005560 Protein of unknown function DUF326 UP17_11630 e46af1acd9e033a7831e67ff3bba0d35 110 Pfam PF03860 Domain of Unknown Function (DUF326) 87 104 2.4E-6 T 11-10-2018 IPR005560 Protein of unknown function DUF326 UP17_18700 04810c8b46ec72419dc5ff697d0f8910 336 Pfam PF03773 Predicted permease 42 327 1.6E-64 T 11-10-2018 IPR005524 Predicted permease DUF318 UP17_19065 ff3fcc2da8345986c2be22ad2ae3e0bf 204 Pfam PF09335 SNARE associated Golgi protein 30 160 4.4E-20 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_02470 7e3f3a3a3364b8f54e0fae35a6d9c553 234 Pfam PF02517 CAAX protease self-immunity 135 223 8.7E-21 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 UP17_20890 8300e0c2fa2460c8bdd796b2589bc2b0 176 Pfam PF03929 PepSY-associated TM region 9 161 8.6E-14 T 11-10-2018 IPR005625 PepSY-associated TM protein UP17_04275 5f229e845f8f5845ab672b821203b710 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 117 142 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_04275 5f229e845f8f5845ab672b821203b710 432 SUPERFAMILY SSF103473 3 413 4.97E-57 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_04275 5f229e845f8f5845ab672b821203b710 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 287 303 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 UP17_04275 5f229e845f8f5845ab672b821203b710 432 Gene3D G3DSA:1.20.1250.20 3 422 2.8E-59 T 11-10-2018 UP17_04275 5f229e845f8f5845ab672b821203b710 432 Pfam PF00083 Sugar (and other) transporter 7 403 4.7E-23 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 UP17_22680 171fa75e51eca9ceb80f6130b63b3e51 531 PIRSF PIRSF005690 25 522 3.3E-189 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_22680 171fa75e51eca9ceb80f6130b63b3e51 531 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 40 508 7.6E-197 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_18185 3d47e6c29867291f73051edd90b17e2f 130 Pfam PF04186 FxsA cytoplasmic membrane protein 6 111 3.6E-36 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 UP17_01675 51b0501da98352384d0923ebb8c72c01 424 Pfam PF02371 Transposase IS116/IS110/IS902 family 292 375 4.0E-17 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 UP17_01675 51b0501da98352384d0923ebb8c72c01 424 Pfam PF01548 Transposase 23 183 5.5E-36 T 11-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 UP17_19145 80b12463fc96462ebf4fcfec70a3846a 134 Pfam PF07681 DoxX 8 86 2.3E-19 T 11-10-2018 IPR032808 DoxX family UP17_15825 036c3a3f6658e26cc5aaad4532a6e9ef 86 Pfam PF13025 Protein of unknown function (DUF3886) 18 84 5.8E-22 T 11-10-2018 IPR024980 Protein of unknown function DUF3886 UP17_19075 61fbf5290a832e347e7664e72707bde1 79 Pfam PF08241 Methyltransferase domain 28 64 8.3E-5 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 UP17_19075 61fbf5290a832e347e7664e72707bde1 79 SUPERFAMILY SSF53335 3 68 1.01E-5 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_19075 61fbf5290a832e347e7664e72707bde1 79 Gene3D G3DSA:3.40.50.150 4 78 4.3E-8 T 11-10-2018 UP17_22920 eb05b7e5058bda1c2c53f7bf16906ffe 130 Gene3D G3DSA:3.10.129.10 1 128 1.7E-52 T 11-10-2018 UP17_22920 eb05b7e5058bda1c2c53f7bf16906ffe 130 SUPERFAMILY SSF54637 8 129 4.76E-32 T 11-10-2018 IPR029069 HotDog domain superfamily UP17_22920 eb05b7e5058bda1c2c53f7bf16906ffe 130 Pfam PF03061 Thioesterase superfamily 39 117 1.8E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 UP17_22920 eb05b7e5058bda1c2c53f7bf16906ffe 130 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 9 125 2.0E-38 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 UP17_15145 341352479b856382dccf9664cae2bcf9 315 Pfam PF10720 Protein of unknown function (DUF2515) 12 309 1.2E-110 T 11-10-2018 IPR019658 Protein of unknown function DUF2515 UP17_09205 ce60edfe17f41662f9be7d80814772a2 184 Pfam PF04982 HPP family 64 180 1.9E-42 T 11-10-2018 IPR007065 HPP UP17_20225 87222916346c21ea6d0534a71ae52e9b 455 Pfam PF03413 Peptidase propeptide and YPEB domain 70 125 0.0017 T 11-10-2018 IPR025711 PepSY domain UP17_20225 87222916346c21ea6d0534a71ae52e9b 455 Pfam PF03929 PepSY-associated TM region 23 394 2.8E-71 T 11-10-2018 IPR005625 PepSY-associated TM protein UP17_18420 b80e752cab259e50801a1b745f61bcec 159 SMART SM00065 31 159 0.0046 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_18420 b80e752cab259e50801a1b745f61bcec 159 SUPERFAMILY SSF55781 14 158 1.7E-45 T 11-10-2018 UP17_18420 b80e752cab259e50801a1b745f61bcec 159 Pfam PF13185 GAF domain 48 155 3.0E-11 T 11-10-2018 IPR003018 GAF domain GO:0005515 UP17_18420 b80e752cab259e50801a1b745f61bcec 159 Gene3D G3DSA:3.30.450.40 3 159 2.8E-67 T 11-10-2018 IPR029016 GAF-like domain superfamily UP17_18420 b80e752cab259e50801a1b745f61bcec 159 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site UP17_21535 72cf89021e19e5fa9ad39aab9092b20e 134 PIRSF PIRSF021389 2 133 3.3E-18 T 11-10-2018 IPR016789 Uncharacterised conserved protein UCP021389 UP17_19945 d461ec9830546d132cc9b87bb2f34b8a 439 Pfam PF02667 Short chain fatty acid transporter 3 439 3.4E-166 T 11-10-2018 IPR006160 Short chain fatty acid transporter AtoE UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 Gene3D G3DSA:1.10.3860.10 1 416 4.2E-135 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 SUPERFAMILY SSF118215 8 404 4.05E-126 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 5.3E-49 T 11-10-2018 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 Pfam PF00375 Sodium:dicarboxylate symporter family 8 403 8.2E-123 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 UP17_01320 0f947e27ff7d0bd5867c2a31d10d4a79 419 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 298 321 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site UP17_11810 24f523c5e98f82bc5427011f207a0092 104 Pfam PF13333 Integrase core domain 68 101 2.8E-10 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 UP17_25860 07e49f74597ee52564eeab974e2000d3 265 Pfam PF12730 ABC-2 family transporter protein 4 182 8.4E-7 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 UP17_22755 122903ab7866e80daa61b2903b9ea102 69 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_22755 122903ab7866e80daa61b2903b9ea102 69 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 5.5E-22 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 UP17_22755 122903ab7866e80daa61b2903b9ea102 69 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 UP17_22755 122903ab7866e80daa61b2903b9ea102 69 Gene3D G3DSA:1.10.8.910 8 68 4.6E-31 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily UP17_20280 e63fa77c11931bcd22c87e577383c7db 215 SUPERFAMILY SSF53474 3 193 5.24E-7 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_20280 e63fa77c11931bcd22c87e577383c7db 215 PIRSF PIRSF033634 1 214 1.6E-55 T 11-10-2018 IPR017018 Uncharacterised conserved protein UCP033634 UP17_14660 5fd8eda15a0589e7caf767c624ab6fbc 278 Pfam PF02582 Uncharacterised ACR, YagE family COG1723 57 228 5.9E-25 T 11-10-2018 IPR003734 Domain of unknown function DUF155 UP17_16620 f8cb7179c5a672632c3e57e75888b46c 235 Gene3D G3DSA:3.40.50.150 1 163 8.1E-53 T 11-10-2018 UP17_16620 f8cb7179c5a672632c3e57e75888b46c 235 SUPERFAMILY SSF53335 12 104 2.88E-6 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_16620 f8cb7179c5a672632c3e57e75888b46c 235 PIRSF PIRSF018637 4 235 4.8E-81 T 11-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 UP17_16620 f8cb7179c5a672632c3e57e75888b46c 235 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 231 1.4E-69 T 11-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 UP17_07110 afbffc5bc6f9dbc2c09a1798db19b159 328 Hamap MF_01664 Heme A synthase [ctaA]. 1 302 29.207 T 11-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UP17_07110 afbffc5bc6f9dbc2c09a1798db19b159 328 Pfam PF02628 Cytochrome oxidase assembly protein 55 287 1.9E-29 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 UP17_03365 2b75019aff6c67d48b4e23dfb64487ac 237 SUPERFAMILY SSF103473 12 225 7.59E-6 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_03365 2b75019aff6c67d48b4e23dfb64487ac 237 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 29 221 1.3E-6 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain UP17_19295 e6c65ede46614ec424e6f5f1da95e74a 109 Pfam PF03551 Transcriptional regulator PadR-like family 15 86 8.6E-20 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal UP17_19295 e6c65ede46614ec424e6f5f1da95e74a 109 Gene3D G3DSA:1.10.10.10 1 108 1.5E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_19295 e6c65ede46614ec424e6f5f1da95e74a 109 SUPERFAMILY SSF46785 3 103 4.67E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_21095 223c5299bda9cdb2f68365506a4f8eca 168 Gene3D G3DSA:1.10.1220.10 115 165 9.8E-7 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 UP17_21095 223c5299bda9cdb2f68365506a4f8eca 168 SUPERFAMILY SSF47598 124 165 8.15E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 UP17_11895 f95701039d9e9d64832483d8fc9c8720 92 Pfam PF01521 Iron-sulphur cluster biosynthesis 22 76 4.6E-6 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 UP17_11895 f95701039d9e9d64832483d8fc9c8720 92 SUPERFAMILY SSF89360 16 74 1.09E-5 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 UP17_21750 4ebfe362b9baa6b6640cdfb4d83d7736 192 Pfam PF13796 Putative sensor 11 184 1.1E-22 T 11-10-2018 IPR025828 Putative sensor domain UP17_03325 0d378cfd83d070f03b8eb00d60d25be5 302 PIRSF PIRSF016502 1 301 1.4E-68 T 11-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 UP17_03325 0d378cfd83d070f03b8eb00d60d25be5 302 Pfam PF03253 Urea transporter 7 295 7.3E-71 T 11-10-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 UP17_03325 0d378cfd83d070f03b8eb00d60d25be5 302 Gene3D G3DSA:1.10.3430.10 1 302 3.3E-76 T 11-10-2018 IPR029020 Ammonium/urea transporter UP17_08185 6beab40e7b4080b26cb542df4a28db67 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 7.2E-40 T 11-10-2018 IPR007347 Sporulation stage V, protein S UP17_08185 6beab40e7b4080b26cb542df4a28db67 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 6.0E-32 T 11-10-2018 IPR007347 Sporulation stage V, protein S UP17_08185 6beab40e7b4080b26cb542df4a28db67 86 Gene3D G3DSA:3.30.110.20 1 86 6.8E-36 T 11-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 UP17_09010 195d6ba5ff3643b17092d70fe1e0ab86 248 Pfam PF03741 Integral membrane protein TerC family 16 199 1.4E-43 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 UP17_09010 195d6ba5ff3643b17092d70fe1e0ab86 248 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 238 5.4E-74 T 11-10-2018 IPR022493 Integral membrane YkoY UP17_20595 d1d5b9e2e1705badc139d9f635cec18c 431 Pfam PF00860 Permease family 9 386 1.7E-54 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 UP17_10370 1d1f5617dd6bb7743ff5fc0dc1d9b79c 73 Pfam PF13217 Protein of unknown function (DUF4025) 6 54 8.0E-19 T 11-10-2018 IPR025100 Protein of unknown function DUF4025 UP17_03600 6e4fe4d5a01dcc54a379f2b28dd0ff89 274 SMART SM00062 51 270 2.2E-82 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_03600 6e4fe4d5a01dcc54a379f2b28dd0ff89 274 Gene3D G3DSA:3.40.190.10 50 262 9.4E-77 T 11-10-2018 UP17_03600 6e4fe4d5a01dcc54a379f2b28dd0ff89 274 Gene3D G3DSA:3.40.190.10 134 231 9.4E-77 T 11-10-2018 UP17_03600 6e4fe4d5a01dcc54a379f2b28dd0ff89 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 269 1.3E-66 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF UP17_03600 6e4fe4d5a01dcc54a379f2b28dd0ff89 274 SUPERFAMILY SSF53850 1 270 5.34E-71 T 11-10-2018 UP17_14040 a1ddaa5f792f8136e9620c87b36c834d 433 Pfam PF00860 Permease family 22 390 7.1E-38 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 UP17_19855 7e8d84a905fe775b349c03c0d8ec2ba0 154 Pfam PF00477 Small hydrophilic plant seed protein 39 84 7.3E-7 T 11-10-2018 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup UP17_19855 7e8d84a905fe775b349c03c0d8ec2ba0 154 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 104 120 1.5E-4 T 11-10-2018 IPR019626 Stress-induced protein, KGG, repeat UP17_13600 ec6113dad21af5b735bba3af7725b734 77 Pfam PF11007 Spore coat associated protein JA (CotJA) 33 68 3.3E-9 T 11-10-2018 IPR020256 Spore coat protein CotJA UP17_13600 ec6113dad21af5b735bba3af7725b734 77 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 10 73 8.0E-24 T 11-10-2018 IPR020256 Spore coat protein CotJA UP17_13120 fd3fbd0431e1c36a99c6bdf58521cbf8 155 Gene3D G3DSA:3.40.140.10 2 155 5.9E-61 T 11-10-2018 UP17_13120 fd3fbd0431e1c36a99c6bdf58521cbf8 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 UP17_13120 fd3fbd0431e1c36a99c6bdf58521cbf8 155 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 9.0E-25 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain UP17_13120 fd3fbd0431e1c36a99c6bdf58521cbf8 155 SUPERFAMILY SSF53927 2 133 3.68E-44 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 UP17_03300 a706f9144180f94dd4c35b2372821eab 227 Pfam PF04474 Protein of unknown function (DUF554) 2 219 1.1E-64 T 11-10-2018 IPR007563 Protein of unknown function DUF554 UP17_03475 2b8ee51751df68a16ad083e65e6bbe2f 262 Pfam PF12679 ABC-2 family transporter protein 6 234 2.0E-9 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 UP17_19235 0ec6ba4e001ccf68190b4b23c754eaa0 140 ProDom PD015812 YOPD YWLA YOAG 44 134 5.0E-10 T 11-10-2018 IPR031374 Uncharacterised protein family UPF0715 UP17_19235 0ec6ba4e001ccf68190b4b23c754eaa0 140 Pfam PF17094 Uncharacterised protein family (UPF0715) 20 133 4.9E-19 T 11-10-2018 IPR031374 Uncharacterised protein family UPF0715 UP17_21905 e7c2b0cafdd308ae09c488fe36ff8eab 39 Pfam PF13215 Protein of unknown function (DUF4023) 1 37 1.3E-14 T 11-10-2018 IPR025097 Protein of unknown function DUF4023 UP17_03190 454db4a1f127dc4c024678d12e31f45f 101 Pfam PF07978 NIPSNAP 6 99 1.0E-24 T 11-10-2018 IPR012577 NIPSNAP UP17_03190 454db4a1f127dc4c024678d12e31f45f 101 SUPERFAMILY SSF54909 1 99 3.54E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel UP17_08650 e427c9f4c642fc44c8e508754b529627 134 Pfam PF07485 Domain of Unknown Function (DUF1259) 12 130 8.0E-34 T 11-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO UP17_10580 1eeb7b9acf3fd4574fa165581fe36b05 194 Pfam PF09819 ABC-type cobalt transport system, permease component 9 124 9.0E-38 T 11-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted UP17_10580 1eeb7b9acf3fd4574fa165581fe36b05 194 PIRSF PIRSF037394 1 191 1.8E-60 T 11-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted UP17_06395 4204a62d6ad7182994375d7756f38dbf 188 Pfam PF02698 DUF218 domain 36 186 1.2E-28 T 11-10-2018 IPR003848 Domain of unknown function DUF218 UP17_18020 b7827cedc584bfb2d62379d362d71808 233 Hamap MF_02104 Lactate utilization protein C [lutC]. 4 230 44.208 T 11-10-2018 IPR022823 Lactate utilization protein C UP17_18020 b7827cedc584bfb2d62379d362d71808 233 SUPERFAMILY SSF100950 46 231 1.46E-42 T 11-10-2018 IPR037171 NagB/RpiA transferase-like UP17_18020 b7827cedc584bfb2d62379d362d71808 233 Gene3D G3DSA:3.40.50.10420 45 230 4.1E-37 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily UP17_18020 b7827cedc584bfb2d62379d362d71808 233 Pfam PF02589 LUD domain 52 230 6.0E-32 T 11-10-2018 IPR003741 LUD domain UP17_06470 94db13cc4b205857bbef33ec762f8685 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 221 3.3E-22 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain UP17_06470 94db13cc4b205857bbef33ec762f8685 233 SUPERFAMILY SSF52266 20 228 1.55E-34 T 11-10-2018 UP17_06470 94db13cc4b205857bbef33ec762f8685 233 Gene3D G3DSA:3.40.50.1110 28 232 1.7E-44 T 11-10-2018 IPR036514 SGNH hydrolase superfamily UP17_18765 b059a93c04ebe7791e9e9c8781f7cd81 73 Gene3D G3DSA:1.10.10.10 10 72 7.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily UP17_18765 b059a93c04ebe7791e9e9c8781f7cd81 73 Pfam PF08220 DeoR-like helix-turn-helix domain 11 53 1.1E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_18765 b059a93c04ebe7791e9e9c8781f7cd81 73 SUPERFAMILY SSF46785 11 60 1.3E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_18765 b059a93c04ebe7791e9e9c8781f7cd81 73 SMART SM00420 11 56 0.0014 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 UP17_22885 3108221cd5053f2de5be36ef61b4376c 140 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 3.5E-30 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein UP17_22540 5d7dde3ca340b23f3dedb2574537cc2a 142 Gene3D G3DSA:1.10.10.2520 8 91 6.8E-12 T 11-10-2018 UP17_22540 5d7dde3ca340b23f3dedb2574537cc2a 142 Pfam PF07486 Cell Wall Hydrolase 24 128 1.5E-17 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 UP17_21050 cc2df60fae49d8c9b26b875a3b18d785 115 Gene3D G3DSA:3.10.180.10 8 115 2.7E-15 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_21050 cc2df60fae49d8c9b26b875a3b18d785 115 SUPERFAMILY SSF54593 6 114 1.31E-19 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase UP17_17760 f8e07ceba289188e9a233ac8f3d12696 119 Pfam PF02656 Domain of unknown function (DUF202) 11 82 2.8E-15 T 11-10-2018 IPR003807 Domain of unknown function DUF202 UP17_22655 a35f810da1ac500d9d35954bb4ccc1d7 287 Pfam PF14257 Domain of unknown function (DUF4349) 18 277 9.8E-71 T 11-10-2018 IPR025645 Domain of unknown function DUF4349 UP17_22090 0588cb75170a9fa711f0e2d312b07902 154 Pfam PF04463 Protein of unknown function (DUF523) 2 145 4.9E-41 T 11-10-2018 IPR007553 Domain of unknown function DUF523 UP17_25320 17c8444fa21e3641fb65290287b45640 409 Pfam PF10117 McrBC 5-methylcytosine restriction system component 48 366 6.0E-76 T 11-10-2018 IPR019292 5-methylcytosine restriction system component UP17_03630 0216a42c7ad9ac77612b46a56323a324 90 Pfam PF04531 Bacteriophage holin 2 90 5.7E-16 T 11-10-2018 IPR006485 Bacteriophage holin UP17_03630 0216a42c7ad9ac77612b46a56323a324 90 TIGRFAM TIGR01598 holin_phiLC3: holin, phage phi LC3 family 2 89 2.6E-14 T 11-10-2018 IPR006485 Bacteriophage holin UP17_19790 5482f423a0fcf98e8496aa59f8a4706d 127 Pfam PF06803 Protein of unknown function (DUF1232) 32 67 4.8E-13 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 UP17_09595 cc86d3f595f5a849dfa6ec59b5d99d08 85 Pfam PF10752 Protein of unknown function (DUF2533) 1 82 8.4E-33 T 11-10-2018 IPR019688 Protein of unknown function DUF2533 UP17_23600 003813da3e3f0d90e4d5df1afb0498ad 314 Pfam PF07670 Nucleoside recognition 18 99 2.8E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 UP17_23600 003813da3e3f0d90e4d5df1afb0498ad 314 Pfam PF07670 Nucleoside recognition 176 263 4.9E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 UP17_06230 daed933addd235d5d01a5203b73642aa 395 Gene3D G3DSA:3.30.1540.10 232 323 3.3E-147 T 11-10-2018 UP17_06230 daed933addd235d5d01a5203b73642aa 395 SUPERFAMILY SSF89796 3 395 2.35E-146 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily UP17_06230 daed933addd235d5d01a5203b73642aa 395 Gene3D G3DSA:3.40.50.10540 5 388 3.3E-147 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily UP17_06230 daed933addd235d5d01a5203b73642aa 395 Pfam PF02515 CoA-transferase family III 5 372 8.7E-139 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 UP17_10040 e3cd77fd8c0c46046b2bd6f91c8fd15c 164 Pfam PF08905 Domain of unknown function (DUF1850) 45 134 1.2E-20 T 11-10-2018 IPR015001 Protein of unknown function DUF1850 UP17_09035 c0a144186538e2b242bedb38307bc809 301 SUPERFAMILY SSF69318 80 271 3.92E-10 T 11-10-2018 UP17_11920 7619b9381f5b18328c356df41e64259b 291 Pfam PF03313 Serine dehydratase alpha chain 15 274 8.3E-78 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit UP17_11920 7619b9381f5b18328c356df41e64259b 291 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 288 2.6E-140 T 11-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 UP17_11750 1dd113608c9d2210058a680d73f7e38e 214 Gene3D G3DSA:1.10.530.10 46 201 1.6E-45 T 11-10-2018 UP17_11750 1dd113608c9d2210058a680d73f7e38e 214 Pfam PF13702 Lysozyme-like 48 200 7.6E-49 T 11-10-2018 UP17_11750 1dd113608c9d2210058a680d73f7e38e 214 SUPERFAMILY SSF53955 51 156 4.78E-10 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily UP17_19875 49ff9b6da2c68647cef978ab5d60e039 72 Pfam PF07872 Protein of unknown function (DUF1659) 6 50 9.9E-16 T 11-10-2018 IPR012454 Protein of unknown function DUF1659 UP17_06660 0e81edec319cf346dd405d14a7b0bdc3 414 Pfam PF12791 Anti-sigma factor N-terminus 7 44 2.1E-9 T 11-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal UP17_23270 9afae4d201edf03d5bef5853367bebf0 206 SUPERFAMILY SSF89562 10 170 9.03E-46 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily UP17_23270 9afae4d201edf03d5bef5853367bebf0 206 Pfam PF03737 Aldolase/RraA 13 161 1.8E-42 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein UP17_23270 9afae4d201edf03d5bef5853367bebf0 206 Gene3D G3DSA:3.50.30.100 1 183 7.0E-55 T 11-10-2018 UP17_05895 2dfbdd253a902fbf593525a23e63482d 59 Pfam PF14168 YjzC-like protein 1 55 1.7E-28 T 11-10-2018 IPR025549 YjzC-like protein UP17_14110 54080cefe9bf1bcb6ba4ce5f4891f127 145 Pfam PF13115 YtkA-like 25 105 1.3E-13 T 11-10-2018 IPR032693 YtkA-like domain UP17_22785 cbbfeaef0bcd72b007e974dcc7905a2e 77 Pfam PF04070 Domain of unknown function (DUF378) 4 61 1.1E-25 T 11-10-2018 IPR007211 Protein of unknown function DUF378 UP17_15210 2813ae81249b9889d4789cf79af5aa7c 113 Pfam PF04341 Protein of unknown function, DUF485 26 108 4.3E-17 T 11-10-2018 IPR007436 Protein of unknown function DUF485 UP17_22875 8a6f6cd9185ca6dc421e79c50d514e86 96 Pfam PF17328 Family of unknown function (DUF5366) 54 93 1.4E-5 T 11-10-2018 IPR035289 Protein of unknown function DUF5366 UP17_01790 f1481a5cedd1c1c671fca5aa2174c514 473 Pfam PF03606 C4-dicarboxylate anaerobic carrier 23 466 4.6E-105 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 UP17_24250 eeccfb8a7f2179c2bd4e98c48252192d 151 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 13 147 1.8E-7 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like UP17_02695 5bf5bbcee5366c9555d32297e667e653 263 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 219 1.0E-25 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel UP17_03530 372a1df927446d2d8f1fa894935d7e61 243 Gene3D G3DSA:3.40.50.1820 5 239 1.5E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_03530 372a1df927446d2d8f1fa894935d7e61 243 SUPERFAMILY SSF53474 5 234 2.88E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_03530 372a1df927446d2d8f1fa894935d7e61 243 Pfam PF00975 Thioesterase domain 7 232 6.9E-41 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 UP17_16445 dd1748bb2a28f4cf6e1bce541da80188 388 Gene3D G3DSA:3.40.630.10 97 388 3.3E-49 T 11-10-2018 UP17_16445 dd1748bb2a28f4cf6e1bce541da80188 388 Pfam PF00246 Zinc carboxypeptidase 114 360 6.8E-26 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_16445 dd1748bb2a28f4cf6e1bce541da80188 388 SMART SM00631 102 377 5.0E-16 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 UP17_16445 dd1748bb2a28f4cf6e1bce541da80188 388 SUPERFAMILY SSF53187 98 384 1.03E-53 T 11-10-2018 UP17_14395 fd022c6fe430b4dd72e298f14d473923 205 Pfam PF14005 YpjP-like protein 67 198 4.7E-56 T 11-10-2018 IPR025616 YpjP-like protein UP17_18905 a41147b9690f80d4b70fc6f8624843e8 115 Pfam PF14079 Domain of unknown function (DUF4260) 3 115 5.6E-43 T 11-10-2018 IPR025356 Protein of unknown function DUF4260 UP17_20010 9c413cd2432e0329953465a98cc1b3a7 316 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 19 303 9.4E-73 T 11-10-2018 IPR025534 Putative PD-(D/E)XK family member (DUF4420) UP17_02930 a538d9420cb6a0087dbf295bf653b249 132 Pfam PF04304 Protein of unknown function (DUF454) 7 119 6.9E-32 T 11-10-2018 IPR007401 Protein of unknown function DUF454 UP17_02930 a538d9420cb6a0087dbf295bf653b249 132 PIRSF PIRSF016789 5 126 3.1E-30 T 11-10-2018 IPR007401 Protein of unknown function DUF454 UP17_07160 efb22b794f2ac6e3024c574ca9839f8e 143 Pfam PF14071 Putative coat protein 11 143 1.7E-35 T 11-10-2018 IPR025953 Putative coat protein YlbD UP17_06785 9b934ab59a1438ad4c94cdce4b9d028a 261 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 12 259 1.1E-59 T 11-10-2018 IPR005226 UPF0014 family UP17_06785 9b934ab59a1438ad4c94cdce4b9d028a 261 Pfam PF03649 Uncharacterised protein family (UPF0014) 12 253 8.7E-83 T 11-10-2018 IPR005226 UPF0014 family UP17_10960 2a00013db76991dd0cd2bcbbdadb937d 389 Pfam PF02535 ZIP Zinc transporter 241 382 3.7E-10 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 UP17_02190 07c1d795cfa91da3800fea2bdaf08a8e 161 PIRSF PIRSF031501 1 161 5.9E-56 T 11-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 UP17_02190 07c1d795cfa91da3800fea2bdaf08a8e 161 Pfam PF06177 QueT transporter 6 152 4.5E-32 T 11-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 UP17_25590 0faa69ed20467f30752edceeb63a2960 363 Pfam PF13222 Protein of unknown function (DUF4030) 228 360 2.0E-15 T 11-10-2018 IPR025108 Protein of unknown function DUF4030 UP17_14350 5eff7844d0095e4aedb69a8e5decd8b1 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 5.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_14350 5eff7844d0095e4aedb69a8e5decd8b1 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 5.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_14350 5eff7844d0095e4aedb69a8e5decd8b1 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 5.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_14350 5eff7844d0095e4aedb69a8e5decd8b1 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 5.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_14350 5eff7844d0095e4aedb69a8e5decd8b1 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 5.7E-54 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_14350 5eff7844d0095e4aedb69a8e5decd8b1 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 232 14.916 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_14350 5eff7844d0095e4aedb69a8e5decd8b1 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 1.5E-54 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 UP17_18600 303981dd393fce8289d10ee6b4f7bac2 161 Pfam PF09335 SNARE associated Golgi protein 29 155 2.7E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_16120 10c95b607bcb5d1d1edd9a890da76fea 222 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 32 222 1.0E-58 T 11-10-2018 IPR014195 Sporulation stage III, protein AG UP17_17020 10bdaf49abab2ff9cf09dca8889dba32 358 Pfam PF01594 AI-2E family transporter 14 344 1.6E-73 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like UP17_21180 344074f044d92d767c766422ef2dc3b6 366 Pfam PF13222 Protein of unknown function (DUF4030) 228 363 2.8E-16 T 11-10-2018 IPR025108 Protein of unknown function DUF4030 UP17_19005 72ceb2c59b397683984074b878b5c75c 323 Pfam PF13536 Putative multidrug resistance efflux transporter 38 305 1.5E-108 T 11-10-2018 IPR032713 Putative multidrug resistance efflux transporter UP17_23120 18ea4e7530e3c3eda0e37592f2ab3895 282 Pfam PF01904 Protein of unknown function DUF72 16 265 1.1E-60 T 11-10-2018 IPR002763 Protein of unknown function DUF72 UP17_23120 18ea4e7530e3c3eda0e37592f2ab3895 282 Gene3D G3DSA:3.20.20.410 1 282 8.0E-96 T 11-10-2018 IPR036520 UPF0759 superfamily UP17_23120 18ea4e7530e3c3eda0e37592f2ab3895 282 SUPERFAMILY SSF117396 1 269 4.32E-84 T 11-10-2018 IPR036520 UPF0759 superfamily UP17_15830 db94f56b6b85a2cb610c26dfa50b9c47 299 Pfam PF12146 Serine aminopeptidase, S33 81 192 2.0E-11 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 UP17_15830 db94f56b6b85a2cb610c26dfa50b9c47 299 Gene3D G3DSA:3.40.50.1820 56 299 1.3E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_15830 db94f56b6b85a2cb610c26dfa50b9c47 299 SUPERFAMILY SSF53474 13 297 2.01E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_15690 3cbc6892bfa135e9bad789baa45439a8 255 Pfam PF02616 Segregation and condensation protein ScpA 20 244 4.2E-57 T 11-10-2018 IPR003768 Segregation and condensation protein A UP17_15690 3cbc6892bfa135e9bad789baa45439a8 255 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 247 26.341 T 11-10-2018 IPR003768 Segregation and condensation protein A UP17_02575 262c682daa95c97a9a54af1d20638679 186 SUPERFAMILY SSF52540 10 183 2.76E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase UP17_02575 262c682daa95c97a9a54af1d20638679 186 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 17 151 7.5E-5 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 UP17_02575 262c682daa95c97a9a54af1d20638679 186 Gene3D G3DSA:3.40.50.300 1 185 2.0E-42 T 11-10-2018 UP17_02575 262c682daa95c97a9a54af1d20638679 186 PRINTS PR00988 Uridine kinase signature 13 30 2.3E-7 T 11-10-2018 UP17_02575 262c682daa95c97a9a54af1d20638679 186 PRINTS PR00988 Uridine kinase signature 139 149 2.3E-7 T 11-10-2018 UP17_02575 262c682daa95c97a9a54af1d20638679 186 PRINTS PR00988 Uridine kinase signature 41 52 2.3E-7 T 11-10-2018 UP17_16795 0ea6ad8517ed33bbd6d919f716e02331 107 Pfam PF12438 Protein of unknown function (DUF3679) 7 62 5.1E-26 T 11-10-2018 IPR020534 Uncharacterised protein family YqxA UP17_16795 0ea6ad8517ed33bbd6d919f716e02331 107 ProDom PD072942 YQXA ORF79 1 107 2.0E-14 T 11-10-2018 IPR020534 Uncharacterised protein family YqxA UP17_17285 8b7c490df4ba35ce60b1322794329215 63 SUPERFAMILY SSF57938 21 50 7.98E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily UP17_20435 96486af806bd3ceb8ebc19de52e32bb8 509 Gene3D G3DSA:1.20.1730.10 21 505 2.7E-31 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily UP17_00210 ed2a1e96341a237fae79f2c225c5754b 247 Gene3D G3DSA:3.40.50.150 8 247 1.5E-71 T 11-10-2018 UP17_00210 ed2a1e96341a237fae79f2c225c5754b 247 SUPERFAMILY SSF53335 16 198 1.09E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase UP17_00210 ed2a1e96341a237fae79f2c225c5754b 247 Pfam PF05175 Methyltransferase small domain 18 127 4.4E-11 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 UP17_08730 6b3a59b111bd228efe96efbf3066ab86 214 Pfam PF00857 Isochorismatase family 14 165 8.3E-21 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 UP17_08730 6b3a59b111bd228efe96efbf3066ab86 214 SUPERFAMILY SSF52499 5 204 1.31E-53 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_08730 6b3a59b111bd228efe96efbf3066ab86 214 Gene3D G3DSA:3.40.50.850 1 209 1.9E-51 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 UP17_05930 e5af6a46bb01b3de6b8633dca1e34e6a 63 Pfam PF11151 Protein of unknown function (DUF2929) 1 54 1.3E-18 T 11-10-2018 IPR021324 Protein of unknown function DUF2929 UP17_20750 b3ac2d98c63411a10af4fdd2eb50505c 194 Gene3D G3DSA:3.40.50.880 1 192 4.0E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_20750 b3ac2d98c63411a10af4fdd2eb50505c 194 Pfam PF01965 DJ-1/PfpI family 2 176 1.1E-30 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 UP17_20750 b3ac2d98c63411a10af4fdd2eb50505c 194 SUPERFAMILY SSF52317 1 191 4.73E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like UP17_23370 da948b2ad4057a4ba3e944b5209fbc79 151 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 8 144 1.5E-25 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 UP17_14345 8ae1dec2ae4f8c563e3f243785a50edf 82 Pfam PF10751 Protein of unknown function (DUF2535) 2 76 1.2E-26 T 11-10-2018 IPR019687 Protein of unknown function DUF2535 UP17_16515 2312721723f34975d934403e997f09fa 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 283 9.0E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 UP17_16515 2312721723f34975d934403e997f09fa 292 SUPERFAMILY SSF161098 29 277 1.78E-40 T 11-10-2018 IPR035906 MetI-like superfamily UP17_16515 2312721723f34975d934403e997f09fa 292 Gene3D G3DSA:1.10.3720.10 58 291 6.1E-34 T 11-10-2018 IPR035906 MetI-like superfamily UP17_16515 2312721723f34975d934403e997f09fa 292 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 22 289 8.6E-86 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 UP17_19885 2774f2664334c6713f05795c73537506 84 Pfam PF17334 Sigma-G-dependent sporulation-specific SASP protein 1 83 1.4E-32 T 11-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein UP17_19885 2774f2664334c6713f05795c73537506 84 ProDom PD059965 SASP SPORULATION-SPECIFIC SIGMA-G-DEPENDENT SPORULATION SPECIFIC CSGA 1 83 8.0E-14 T 11-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein UP17_24770 2b742226e6be939802c6666931c9cd3a 219 Pfam PF07947 YhhN family 29 203 1.8E-37 T 11-10-2018 IPR012506 YhhN-like GO:0016021 UP17_12135 e342bbf65c1a96e2b0d388e1c0b91c18 180 Pfam PF04308 Ribonuclease H-like 23 178 9.9E-47 T 11-10-2018 IPR007405 Bacteriophage KVP40, Orf299 UP17_20365 49642400bf4a41b6840f820ca7a87bfd 197 SUPERFAMILY SSF53474 7 194 2.52E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_20365 49642400bf4a41b6840f820ca7a87bfd 197 Pfam PF01738 Dienelactone hydrolase family 9 194 7.4E-24 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 UP17_20365 49642400bf4a41b6840f820ca7a87bfd 197 Gene3D G3DSA:3.40.50.1820 4 195 1.9E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold UP17_00605 b07697e63f63f4dca1e2e976d361d07c 169 Pfam PF05991 YacP-like NYN domain 4 166 4.0E-56 T 11-10-2018 IPR010298 Protein of unknown function DUF901 UP17_17455 ce9f2c911c8fe6cf44f4e29195483653 201 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 16 193 3.7E-22 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like UP17_19060 1578e3cb8b5ce7e92fd17d1008f6e9c6 545 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 42 507 2.8E-187 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_19060 1578e3cb8b5ce7e92fd17d1008f6e9c6 545 PIRSF PIRSF005690 27 522 3.3E-185 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 UP17_19035 d46f8544a41f4cb4c34a5ead40f23b78 160 Pfam PF11188 Protein of unknown function (DUF2975) 31 159 2.0E-40 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 UP17_24675 c60498f70210f8bc260ec263d8d9bb15 64 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 2 62 3.0E-32 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 UP17_24675 c60498f70210f8bc260ec263d8d9bb15 64 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 2 63 5.9E-34 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 UP17_14955 122a334d5415dd6d37a4d450498e1617 156 Gene3D G3DSA:1.10.8.1150 91 156 2.4E-9 T 11-10-2018 UP17_11505 f44590fcb24d241ea2b831b52b6ed4ff 156 Pfam PF03682 Uncharacterised protein family (UPF0158) 6 154 1.4E-13 T 11-10-2018 IPR005361 Uncharacterised protein family UPF0158 UP17_23365 0d3404c5f8fa01946e32ec40986556b2 508 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 446 4.9E-152 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane UP17_14230 9ddbce378fa26ec8d575d764f72a0dba 95 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 10 82 3.0E-11 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 UP17_14230 9ddbce378fa26ec8d575d764f72a0dba 95 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 1 92 1.1E-31 T 11-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 UP17_13900 e7dcca89e686372fe5ef5b6b7f6cd8e9 99 Pfam PF07875 Coat F domain 15 76 7.3E-20 T 11-10-2018 IPR012851 Spore coat protein CotF-like UP17_00135 27c9b45bb52b5c1f58a2d68a9c4c1280 72 Pfam PF10704 Protein of unknown function (DUF2508) 2 69 1.0E-24 T 11-10-2018 IPR019644 Protein of unknown function DUF2508 UP17_11270 e9836d88a46a94d528b64c7b294f836b 436 Pfam PF03600 Citrate transporter 14 383 2.6E-45 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 UP17_11270 e9836d88a46a94d528b64c7b294f836b 436 TIGRFAM TIGR00784 citMHS: citrate transporter 1 435 7.6E-200 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 UP17_02125 c012806a928924c682c1a5597b817dd1 67 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 5.1E-23 T 11-10-2018 IPR012452 Protein of unknown function DUF1657 UP17_20375 4b3dae4000d1f4bbe76e60609ecf0cd7 67 Pfam PF13076 Fur-regulated basic protein A 12 45 5.8E-15 T 11-10-2018 IPR025072 Fur-regulated basic protein A UP17_18360 527b06b88cd0ea0b21000ac8829ae224 334 Pfam PF09084 NMT1/THI5 like 49 262 3.3E-77 T 11-10-2018 IPR015168 SsuA/THI5-like UP17_18360 527b06b88cd0ea0b21000ac8829ae224 334 Gene3D G3DSA:3.40.190.10 120 222 8.6E-110 T 11-10-2018 UP17_18360 527b06b88cd0ea0b21000ac8829ae224 334 Gene3D G3DSA:3.40.190.10 44 331 8.6E-110 T 11-10-2018 UP17_18360 527b06b88cd0ea0b21000ac8829ae224 334 SUPERFAMILY SSF53850 43 322 2.25E-48 T 11-10-2018 UP17_05570 ee83162ee6b30456acf57d41107b9f64 120 Pfam PF12732 YtxH-like protein 7 79 1.1E-11 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH UP17_18325 f5b8828fcb299c58b29e6d68305cfb1d 145 Pfam PF06271 RDD family 12 136 1.3E-21 T 11-10-2018 IPR010432 RDD UP17_08310 57d6695e5eb5c10854c58ee277a819df 145 Pfam PF07849 Protein of unknown function (DUF1641) 103 126 2.2E-5 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 UP17_17435 d500a4dc59786468070f4d478b49ffda 68 Pfam PF11146 Protein of unknown function (DUF2905) 6 64 2.4E-22 T 11-10-2018 IPR021320 Protein of unknown function DUF2905 UP17_15605 148f8792e92176b341b137762606518d 405 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 1 402 9.0E-29 T 11-10-2018 UP17_20465 3d0729c62671a6f018c033c0a0741ea1 422 Pfam PF03611 PTS system sugar-specific permease component 8 404 2.3E-148 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 UP17_15015 034331d6f3b09fa0ab53e653e787c5c9 61 Pfam PF10782 Zinc-finger 1 58 2.3E-27 T 11-10-2018 IPR019718 Protein of unknown function DUF2602 UP17_18510 ff2e92dbd5273b46d0a7a518efa55e7e 103 Pfam PF00085 Thioredoxin 13 101 1.2E-16 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 UP17_18510 ff2e92dbd5273b46d0a7a518efa55e7e 103 Gene3D G3DSA:3.40.30.10 1 102 4.9E-24 T 11-10-2018 UP17_18510 ff2e92dbd5273b46d0a7a518efa55e7e 103 SUPERFAMILY SSF52833 5 102 8.18E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily UP17_02395 1208501efc3dde4b56d9a20461ce2865 219 Pfam PF13751 Transposase DDE domain 91 214 1.0E-15 T 11-10-2018 IPR025668 Transposase DDE domain UP17_07095 7b56d63fa7aae441f66c279ea9df0d3b 170 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 7 169 4.0E-47 T 11-10-2018 IPR020229 Uncharacterised protein YlaL UP17_16550 09bbbf0a8da136273056a91e163a87f8 255 Pfam PF06691 Protein of unknown function (DUF1189) 4 245 1.2E-67 T 11-10-2018 IPR009574 Protein of unknown function DUF1189 UP17_03640 59ca98b0ea46fcc5d59b659a36e8b4c1 178 Pfam PF14345 GDYXXLXY protein 15 174 5.1E-33 T 11-10-2018 IPR025833 GDYXXLXY protein UP17_24645 5857c7c38ca8a40680faa5e88184823e 430 Pfam PF00860 Permease family 14 391 3.5E-55 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 UP17_24645 5857c7c38ca8a40680faa5e88184823e 430 PIRSF PIRSF005353 1 430 3.4E-159 T 11-10-2018 IPR026033 Purine permease PbuG-like UP17_04390 81d0a817764b1ed7f9f524be43d994ed 137 Pfam PF10722 Putative bacterial sensory transduction regulator 6 132 3.3E-8 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN UP17_06240 ec8027affc501868c2b9d273b390d564 103 Pfam PF12986 Domain of unknown function (DUF3870) 5 97 2.2E-27 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 UP17_01395 b3e46e7dc5e26ebe3f5fb9feae69c83a 118 SUPERFAMILY SSF52091 1 113 3.14E-19 T 11-10-2018 IPR036513 STAS domain superfamily UP17_01395 b3e46e7dc5e26ebe3f5fb9feae69c83a 118 Pfam PF01740 STAS domain 10 94 6.5E-12 T 11-10-2018 IPR002645 STAS domain UP17_01395 b3e46e7dc5e26ebe3f5fb9feae69c83a 118 Gene3D G3DSA:3.30.750.24 1 116 1.5E-31 T 11-10-2018 IPR036513 STAS domain superfamily UP17_15435 1992a0b5c3b1b065d958f79423ac7f5d 240 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 17 237 6.0E-75 T 11-10-2018 UP17_18320 f206c55f8c13b7d0fa366dd581a96ed1 230 Pfam PF11167 Protein of unknown function (DUF2953) 131 177 4.6E-15 T 11-10-2018 IPR021338 Protein of unknown function DUF2953 UP17_04980 d52a882eb593d970014164f2b3d46073 63 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 13 35 4.6E-10 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like UP17_04980 d52a882eb593d970014164f2b3d46073 63 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 15 37 4.3E-12 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like UP17_24780 4ce2f18f5e0f7c7f49557444c733a33e 346 Pfam PF13303 Phosphotransferase system, EIIC 18 343 8.3E-98 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 UP17_08085 2a72a731d72b429f5d8ad168a18f62e7 75 Pfam PF14035 YlzJ-like protein 3 67 1.1E-19 T 11-10-2018 IPR025619 YlzJ-like protein UP17_01780 c8afc87057d4698ee8b547f5bc0a641b 135 Pfam PF07070 SpoOM protein 3 133 1.1E-17 T 11-10-2018 IPR009776 Sporulation stage 0, protein M UP17_06625 e0f319bf299c7ac706971c92c7b17ef7 315 Pfam PF03547 Membrane transport protein 7 157 4.0E-21 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 UP17_06625 e0f319bf299c7ac706971c92c7b17ef7 315 Pfam PF03547 Membrane transport protein 172 311 2.5E-17 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 UP17_13605 8cf884763d7a5dfbb4ac0ca2a0540d46 88 PIRSF PIRSF010606 1 88 2.0E-37 T 11-10-2018 IPR016571 Spore coat assembly protein CotJB UP17_13605 8cf884763d7a5dfbb4ac0ca2a0540d46 88 Pfam PF12652 CotJB protein 11 87 1.4E-27 T 11-10-2018 IPR024207 Spore coat assembly protein CotJB, domain UP17_09845 786a5a2076fbb2b4b1963ad9f7128d50 185 SUPERFAMILY SSF103473 7 174 1.57E-23 T 11-10-2018 IPR036259 MFS transporter superfamily UP17_09845 786a5a2076fbb2b4b1963ad9f7128d50 185 Gene3D G3DSA:1.20.1250.20 2 182 2.9E-22 T 11-10-2018 UP17_09845 786a5a2076fbb2b4b1963ad9f7128d50 185 Pfam PF07690 Major Facilitator Superfamily 12 170 1.8E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 UP17_09395 bfd0c2aa94d75b4280ad7e819181a15c 142 Pfam PF11084 Protein of unknown function (DUF2621) 4 141 1.8E-71 T 11-10-2018 IPR020203 Uncharacterised protein family, YneK UP17_09395 bfd0c2aa94d75b4280ad7e819181a15c 142 ProDom PD086666 YNEK BH2332 11 142 7.0E-50 T 11-10-2018 IPR020203 Uncharacterised protein family, YneK UP17_07845 056a355f1d2173cea3d26d100a724ca1 220 Pfam PF04347 Flagellar biosynthesis protein, FliO 92 176 9.7E-14 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 UP17_05605 a06dd86724c73b0b346e47b77dbae9e7 234 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 11 232 2.0E-65 T 11-10-2018 UP17_05605 a06dd86724c73b0b346e47b77dbae9e7 234 Pfam PF12787 EcsC protein family 6 232 1.3E-71 T 11-10-2018 IPR024787 EcsC protein UP17_11025 45291df14eb1e12f9e188d26937d135e 169 Pfam PF07681 DoxX 16 113 2.2E-9 T 11-10-2018 IPR032808 DoxX family UP17_19840 26e997a7b50b0140031bdb2ccd097173 130 Pfam PF04134 Protein of unknown function, DUF393 5 113 7.7E-36 T 11-10-2018 IPR007263 Protein of unknown function DUF393 UP17_03565 81fad54b1188a3dbce862ccf46db4f12 639 Pfam PF02687 FtsX-like permease family 85 169 5.0E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 UP17_03565 81fad54b1188a3dbce862ccf46db4f12 639 PIRSF PIRSF018968 1 635 1.5E-124 T 11-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 UP17_03805 1c0d228dfce0f53c09b3283e737098a9 91 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 11 90 3.1E-31 T 11-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 UP17_03805 1c0d228dfce0f53c09b3283e737098a9 91 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 11 90 5.3E-28 T 11-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 UP17_08835 ca636241e4b72c4a0155b80e96b4ffa9 173 Pfam PF04229 GrpB protein 4 164 6.4E-50 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase UP17_08835 ca636241e4b72c4a0155b80e96b4ffa9 173 SUPERFAMILY SSF81301 7 169 1.41E-50 T 11-10-2018 UP17_08835 ca636241e4b72c4a0155b80e96b4ffa9 173 Gene3D G3DSA:3.30.460.10 1 172 3.0E-55 T 11-10-2018 UP17_19340 f93cc3c652199bb659755bfeefda20b4 321 Pfam PF05114 Protein of unknown function (DUF692) 95 283 6.9E-12 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 UP17_19340 f93cc3c652199bb659755bfeefda20b4 321 Gene3D G3DSA:3.20.20.150 71 295 1.6E-13 T 11-10-2018 UP17_10725 40f6587812c3e0a4a7a1ebb2bf3aa923 140 Pfam PF08818 Domain of unknown function (DU1801) 25 129 3.8E-13 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 UP17_10725 40f6587812c3e0a4a7a1ebb2bf3aa923 140 SUPERFAMILY SSF159888 12 132 1.18E-7 T 11-10-2018 UP17_16935 474f49c3e6c5f6ae2a09deeae8bf5288 70 Pfam PF10750 Protein of unknown function (DUF2536) 1 69 7.1E-31 T 11-10-2018 IPR019686 Protein of unknown function DUF2536 UP17_22890 a3f6cc8cb6da8d1200d52c87261e5c16 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 9.8E-32 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like UP17_22590 9128b345140b1306f438e4d27054b485 215 Gene3D G3DSA:2.60.40.1240 79 212 4.2E-7 T 11-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily UP17_12215 0345044da2d5b708fceca4507ff9c01b 113 Pfam PF12986 Domain of unknown function (DUF3870) 8 100 1.9E-26 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 UP17_06880 f8d5c3355c9faf50e3ffc05d47c8184d 161 Pfam PF13158 Protein of unknown function (DUF3993) 6 119 2.1E-20 T 11-10-2018 IPR025056 Protein of unknown function DUF3993 UP17_10590 bb40f1bdc6146b7c34e65aef50fc025f 258 Pfam PF02361 Cobalt transport protein 7 223 5.9E-30 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component UP17_13395 a10f07a25e93529ef8e5d398cf3afc32 87 Pfam PF02583 Metal-sensitive transcriptional repressor 4 83 4.9E-25 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 UP17_13395 a10f07a25e93529ef8e5d398cf3afc32 87 Gene3D G3DSA:1.20.58.1000 2 86 8.7E-24 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily UP17_17595 14c548b7e681446438557b5881d8a902 329 SUPERFAMILY SSF110997 156 218 8.37E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 UP17_23395 bf9f7f7863e53ca1386957bf8a6c7252 120 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 4 111 6.9E-35 T 11-10-2018 IPR018745 Domain of unknown function DUF2294 UP17_14655 4c6bb064063f8b0adbd7d7e23737dccd 447 Pfam PF03390 2-hydroxycarboxylate transporter family 31 441 1.2E-157 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 UP17_14655 4c6bb064063f8b0adbd7d7e23737dccd 447 PIRSF PIRSF005348 12 447 1.0E-169 T 11-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 UP17_01775 b445065116dee0ba48162ef837f5da8b 323 Gene3D G3DSA:2.60.40.640 13 132 4.2E-5 T 11-10-2018 IPR014752 Arrestin, C-terminal UP17_01775 b445065116dee0ba48162ef837f5da8b 323 Pfam PF07070 SpoOM protein 2 196 1.3E-45 T 11-10-2018 IPR009776 Sporulation stage 0, protein M UP17_06750 6b0c3431042484dbdc486f6830f6fe8f 564 SUPERFAMILY SSF55486 35 559 8.52E-120 T 11-10-2018 UP17_06750 6b0c3431042484dbdc486f6830f6fe8f 564 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 13 560 1.7E-218 T 11-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related UP17_06750 6b0c3431042484dbdc486f6830f6fe8f 564 Gene3D G3DSA:1.10.1370.30 1 564 1.9E-210 T 11-10-2018 UP17_19860 f8a48ae52286f25610a944b8682e6d02 75 Pfam PF00477 Small hydrophilic plant seed protein 12 69 1.3E-6 T 11-10-2018 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup UP17_23835 a2a0c9b7c1832503f4549fe90683817f 476 Pfam PF04932 O-Antigen ligase 236 411 5.6E-22 T 11-10-2018 IPR007016 O-antigen ligase-related UP17_14985 cbcd7ea172fed52ca59e930b992546dd 147 Pfam PF11181 Heat induced stress protein YflT 6 42 4.9E-8 T 11-10-2018 IPR025889 General stress protein 17M-like domain UP17_04505 2cccce35b4d6ed562a582f09340751b0 146 Pfam PF04138 GtrA-like protein 13 133 5.0E-19 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 UP17_04130 7cded04e561e350dd10e267204b35a7e 261 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 28 251 7.6E-57 T 11-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related UP17_01650 6199201d2fbd7063f07a1070c3c50dc1 166 Pfam PF13420 Acetyltransferase (GNAT) domain 3 159 7.2E-15 T 11-10-2018 UP17_01650 6199201d2fbd7063f07a1070c3c50dc1 166 SUPERFAMILY SSF55729 1 165 7.53E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_01650 6199201d2fbd7063f07a1070c3c50dc1 166 Gene3D G3DSA:3.40.630.30 1 165 2.0E-39 T 11-10-2018 UP17_21940 8057cdffc2eee56a714e49fa1e784582 87 SUPERFAMILY SSF46689 1 85 8.78E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 UP17_02100 95f6e426fe04a0ad5f706b6d676bd245 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 2.9E-13 T 11-10-2018 IPR012452 Protein of unknown function DUF1657 UP17_09520 6ad41aef0a8d5fe24c2c896ba89ba2cc 395 Pfam PF10720 Protein of unknown function (DUF2515) 51 381 1.3E-123 T 11-10-2018 IPR019658 Protein of unknown function DUF2515 UP17_22975 6495740d093607ebdd657c3bab178464 105 Pfam PF14068 Putative membrane protein 6 105 2.1E-40 T 11-10-2018 IPR025917 Putative membrane protein YuiB UP17_19210 d0fe4d8bb39c148bd5abd6087e9f7dd8 152 Pfam PF10901 Protein of unknown function (DUF2690) 29 131 2.4E-32 T 11-10-2018 IPR021224 Protein of unknown function DUF2690 UP17_12290 f3ab94ef47b2663e280ab4daf92de071 167 Pfam PF13798 Protein of unknown function with PCYCGC motif 13 165 1.5E-66 T 11-10-2018 IPR025673 Protein of unknown function with PCYCGC motif UP17_11960 cf703cb4f45caf6c9c2ddc2472037316 306 Pfam PF04294 VanW like protein 150 279 1.7E-48 T 11-10-2018 IPR007391 Vancomycin resistance VanW UP17_17035 122c9331c71ae4d5d4b8f72cf381df3d 256 Pfam PF04536 TPM domain 36 159 1.2E-33 T 11-10-2018 IPR007621 TPM domain UP17_17035 122c9331c71ae4d5d4b8f72cf381df3d 256 Gene3D G3DSA:3.10.310.50 19 170 9.8E-45 T 11-10-2018 UP17_20560 49ff9e5f0c84a3a9a1def87b8c114784 149 Pfam PF10787 Uncharacterised protein from bacillus cereus group 5 141 1.7E-56 T 11-10-2018 IPR019723 Uncharacterised protein, YfmQ UP17_18555 310f3f268dc1495a16e176ecf0bf6508 91 Pfam PF14165 YtzH-like protein 3 88 4.9E-37 T 11-10-2018 IPR025547 YtzH-like protein UP17_02255 dc9d286ddd63bb604dec36f65b0d370c 368 Pfam PF02687 FtsX-like permease family 276 359 3.5E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 UP17_02255 dc9d286ddd63bb604dec36f65b0d370c 368 Pfam PF12704 MacB-like periplasmic core domain 21 219 1.8E-9 T 11-10-2018 IPR025857 MacB-like periplasmic core domain UP17_24430 ee2d391113c2d1f5dea3911be839b070 167 Pfam PF09671 Spore coat protein (Spore_GerQ) 77 152 1.5E-41 T 11-10-2018 IPR014099 Spore coat protein GerQ UP17_24430 ee2d391113c2d1f5dea3911be839b070 167 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 75 156 1.0E-42 T 11-10-2018 IPR014099 Spore coat protein GerQ UP17_24430 ee2d391113c2d1f5dea3911be839b070 167 PIRSF PIRSF038931 1 167 2.6E-56 T 11-10-2018 IPR014099 Spore coat protein GerQ UP17_23215 4b087375527bf80e25bf7060c7ae0829 111 Pfam PF07875 Coat F domain 21 82 7.5E-21 T 11-10-2018 IPR012851 Spore coat protein CotF-like UP17_12480 3c35f9007f3d7ead8ce5cf6d62cc55f0 435 Pfam PF07158 Dicarboxylate carrier protein MatC N-terminus 1 149 1.6E-44 T 11-10-2018 IPR009827 Dicarboxylate carrier MatC N-terminal UP17_03645 7ebd6c490af1061aafac4ffdb3b22c51 358 Pfam PF09925 Predicted membrane protein (DUF2157) 27 159 3.3E-29 T 11-10-2018 IPR018677 Domain of unknown function DUF2157 UP17_09580 3261c1dc52b8e5cd972b13e4b7978983 259 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 2.7E-42 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 UP17_23115 3f1523f74bba3891cc2db7ac1f3d7e8e 275 Pfam PF01925 Sulfite exporter TauE/SafE 7 268 8.5E-56 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 UP17_18045 24b50114034a82b3aba8a05de178d3ab 91 Pfam PF06961 Protein of unknown function (DUF1294) 15 69 6.0E-24 T 11-10-2018 IPR010718 Protein of unknown function DUF1294 UP17_12815 a85dbd55b2afe5940736d78a7e087a85 142 Pfam PF07681 DoxX 8 86 9.5E-22 T 11-10-2018 IPR032808 DoxX family UP17_08120 0b97e70eb40c7fc676f4fe87a45bbb47 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 288 3.1E-42 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 UP17_05690 2242c83c0db111e22e6e1b2313e3528d 204 Pfam PF09335 SNARE associated Golgi protein 43 161 4.5E-20 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_21245 c9215dc4e886121a4f2b0d6e476285b9 162 Pfam PF11188 Protein of unknown function (DUF2975) 34 162 8.9E-38 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 UP17_03855 11b556fca155bc45c25ea214eba0b69a 363 Pfam PF06081 Aromatic acid exporter family member 1 1 142 4.6E-40 T 11-10-2018 IPR010343 Aromatic acid exporter family member 1 UP17_18295 2597a3b1acde4a0d7f657362a3a1c4da 280 Pfam PF12787 EcsC protein family 9 272 7.4E-54 T 11-10-2018 IPR024787 EcsC protein UP17_02185 871badfdfe437ec3321820183b469658 218 Pfam PF09335 SNARE associated Golgi protein 63 173 2.5E-16 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_07080 f69c134507b60047ad24c5446e16169d 66 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 1 56 8.2E-31 T 11-10-2018 IPR019241 Protein of unknown function DUF2197 UP17_13080 5bc103401642a00ec1931945017cf980 355 Pfam PF01594 AI-2E family transporter 16 344 3.3E-79 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like UP17_08870 d617404fbc611eadeb1f9f1f86e51ecb 238 SUPERFAMILY SSF55729 19 187 6.52E-8 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase UP17_03155 322e1ba2c6202342d13ce466e6725598 316 Pfam PF00487 Fatty acid desaturase 38 273 1.6E-33 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 UP17_18225 6c9deb03f2f0baf0c16fd46c7ae26787 111 Pfam PF14034 Sporulation protein YtrH 9 106 3.5E-40 T 11-10-2018 IPR025689 Sporulation protein YtrH UP17_05530 b021b4c2396076145f0b4bf5b351e5a2 62 Pfam PF14147 Sporulation protein YhaL 3 54 1.4E-20 T 11-10-2018 IPR025428 Sporulation protein YhaL UP17_07820 f330130a7ab4b4db09cbc4053605767c 71 Pfam PF06289 Flagellar protein (FlbD) 2 58 1.2E-22 T 11-10-2018 IPR009384 Swarming motility protein SwrD-like UP17_23405 f460064a353f640b7a1fb9dff48ef6ff 158 Pfam PF07849 Protein of unknown function (DUF1641) 117 154 1.3E-15 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 UP17_18880 eacd8b26929d46d09bb420bf9225ab84 180 Pfam PF02592 Putative vitamin uptake transporter 32 161 6.6E-11 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 UP17_18480 046c2daface494778b5ed4beddd0f735 169 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 95 5.2E-28 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 UP17_12620 7a3ff28927a74b39f8c729c11b969d6f 505 Pfam PF03988 Repeat of Unknown Function (DUF347) 196 251 1.0E-15 T 11-10-2018 IPR007136 Protein of unknown function DUF347 UP17_12620 7a3ff28927a74b39f8c729c11b969d6f 505 Pfam PF03988 Repeat of Unknown Function (DUF347) 21 72 1.2E-13 T 11-10-2018 IPR007136 Protein of unknown function DUF347 UP17_12620 7a3ff28927a74b39f8c729c11b969d6f 505 Pfam PF03988 Repeat of Unknown Function (DUF347) 141 189 1.2E-9 T 11-10-2018 IPR007136 Protein of unknown function DUF347 UP17_12620 7a3ff28927a74b39f8c729c11b969d6f 505 Pfam PF03988 Repeat of Unknown Function (DUF347) 76 126 4.6E-12 T 11-10-2018 IPR007136 Protein of unknown function DUF347 UP17_13760 d700ec43441394fccff07191e26b9cc7 60 Pfam PF08863 YolD-like protein 1 59 4.3E-8 T 11-10-2018 IPR014962 YolD-like protein UP17_18040 eecdf4d6b49dfe37bf4ba72f61caf1a8 189 Pfam PF09335 SNARE associated Golgi protein 35 148 3.3E-12 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_20825 64b5fa72c00a1be1687403fefa0de724 319 Pfam PF12679 ABC-2 family transporter protein 3 317 5.2E-22 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 UP17_21570 f8075adab6ac2ccc1a56b4d6d1901bbe 273 SUPERFAMILY SSF56059 92 240 3.95E-9 T 11-10-2018 UP17_13100 811bf4d92553fa5a71b44517bbdcfd74 106 Gene3D G3DSA:3.30.160.250 3 104 2.1E-8 T 11-10-2018 UP17_11720 b62fdc0906346e82d8f7fe19011861ec 386 Pfam PF05684 Protein of unknown function (DUF819) 11 386 4.7E-119 T 11-10-2018 IPR008537 Protein of unknown function DUF819 UP17_20450 67ba4ce2515722f53cb89ebf23677f87 432 SUPERFAMILY SSF46785 379 431 4.02E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily UP17_12335 0a3c5f20cc712b90c4b3f419471c1eac 341 Pfam PF03601 Conserved hypothetical protein 698 15 319 1.1E-84 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 UP17_25640 d5bd9e3e4756bcc491f6be302d7655c1 159 SUPERFAMILY SSF47598 5 56 7.67E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 UP17_05155 fcf987a2c4757f941dc53cf0dbf7e900 210 Pfam PF09335 SNARE associated Golgi protein 30 156 2.6E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein UP17_02375 7a06bb90d3770d4d32dd9e208c0a5f55 239 SUPERFAMILY SSF140663 20 96 1.57E-5 T 11-10-2018 IPR023203 TTHA0068-like superfamily UP17_15315 2c78dae26009ee956c838247931c326e 224 Pfam PF04298 Putative neutral zinc metallopeptidase 2 217 1.0E-93 T 11-10-2018 IPR007395 Putative neutral zinc metallopeptidase UP17_23900 37041a00af64de4cd7c79cfa2b7ca638 90 Pfam PF13751 Transposase DDE domain 20 87 1.3E-13 T 11-10-2018 IPR025668 Transposase DDE domain UP17_17935 a2c21df94ae1b063e511ded7f1fda06e 181 Pfam PF02674 Colicin V production protein 2 164 9.8E-38 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 UP17_02205 05ef6afb721538afad3e6b31247a936e 98 Pfam PF13031 Protein of unknown function (DUF3892) 29 96 2.2E-16 T 11-10-2018 IPR024997 Protein of unknown function DUF3892 UP17_07650 54f5d1a8daacab38381aada98ff756e7 128 Pfam PF11068 YlqD protein 1 128 2.9E-33 T 11-10-2018 IPR021297 YlqD protein UP17_16545 e3f027170a3b6a05854365f49bd7f3b5 161 Pfam PF04306 Protein of unknown function (DUF456) 21 158 2.6E-39 T 11-10-2018 IPR007403 Protein of unknown function DUF456 UP17_03275 bb316ce37ad69525addaecb58da14dff 210 PIRSF PIRSF006324 1 209 7.7E-48 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_03275 bb316ce37ad69525addaecb58da14dff 210 Pfam PF01810 LysE type translocator 17 206 3.6E-30 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 UP17_25420 e8d2b756f39ef8d5b4f2a64f690ce1b0 86 SUPERFAMILY SSF56349 27 83 5.18E-5 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 UP17_17135 e7cb5205325c20b18f8259be1844067c 101 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 27 93 7.5E-16 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D UP17_25395 8ef6e1537fb964f4e8ef947cfb1ca1d4 444 Pfam PF08808 RES domain 289 417 6.3E-7 T 11-10-2018 IPR014914 RES domain UP17_12890 49af79926bfaee7685b9a17b10db6d00 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 105 6.7E-24 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD UP17_15630 47fd10bc04c1211413b03ee2fd60464e 549 Pfam PF05140 ResB-like family 443 519 2.2E-17 T 11-10-2018 IPR007816 ResB-like domain UP17_15630 47fd10bc04c1211413b03ee2fd60464e 549 Pfam PF05140 ResB-like family 64 429 3.4E-73 T 11-10-2018 IPR007816 ResB-like domain UP17_20230 b6c7491ee11084bfb485ca8dc32c453d 156 Pfam PF13115 YtkA-like 32 114 1.3E-12 T 11-10-2018 IPR032693 YtkA-like domain UP17_05965 54c450282913061f9ced195f31feb9c5 256 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 66 252 3.5E-43 T 11-10-2018 IPR018728 Domain of unknown function DUF2268 UP17_24060 f3bcf130980fb9fca4f0671f119503c8 141 Pfam PF04892 VanZ like family 14 117 1.4E-10 T 11-10-2018 IPR006976 VanZ-like UP17_15130 97ef2548770fa12f2e02f52c66d86b08 178 Pfam PF14179 YppG-like protein 79 176 3.5E-26 T 11-10-2018 IPR025555 YppG-like protein