B1NLA3E_00005	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
B1NLA3E_00010	SM00480	DNA polymerase III beta subunit
B1NLA3E_00030	SM00387	Histidine kinase-like ATPases
B1NLA3E_00030	SM00433	TopoisomeraseII
B1NLA3E_00035	SM00434	DNA Topoisomerase IV
B1NLA3E_00045	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_00045	SM01240	B1NLA3E_00045
B1NLA3E_00050	SM00936	Penicillin-binding protein 5, C-terminal domain 
B1NLA3E_00060	SM01211	B1NLA3E_00060
B1NLA3E_00080	SM00257	Lysin motif
B1NLA3E_00080	SM00636	B1NLA3E_00080
B1NLA3E_00085	SM00052	Putative diguanylate phosphodiesterase
B1NLA3E_00095	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00105	SM00493	B1NLA3E_00105
B1NLA3E_00170	SM00966	SpoVT / AbrB like domain 
B1NLA3E_00185	SM01208	B1NLA3E_00185
B1NLA3E_00190	SM00493	B1NLA3E_00190
B1NLA3E_00195	SM00650	Ribosomal RNA adenine dimethylases
B1NLA3E_00240	SM01400	B1NLA3E_00240
B1NLA3E_00260	SM00487	DEAD-like helicases superfamily
B1NLA3E_00260	SM00490	helicase superfamily c-terminal domain
B1NLA3E_00260	SM00982	B1NLA3E_00260
B1NLA3E_00260	SM01058	CarD-like/TRCF domain
B1NLA3E_00265	SM00966	SpoVT / AbrB like domain 
B1NLA3E_00280	SM00363	S4 RNA-binding domain
B1NLA3E_00300	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_00305	SM00331	Sigma factor PP2C-like phosphatases
B1NLA3E_00305	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
B1NLA3E_00315	SM00220	Serine/Threonine protein kinases, catalytic domain
B1NLA3E_00325	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00355	SM00905	Dihydroneopterin aldolase
B1NLA3E_00365	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_00395	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00395	SM01086	C-terminal, D2-small domain, of ClpB protein
B1NLA3E_00400	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00405	SM00670	Large family of predicted nucleotide-binding domains
B1NLA3E_00430	SM00840	B1NLA3E_00430
B1NLA3E_00435	SM00535	Ribonuclease III family
B1NLA3E_00440	SM00967	RNA 2'-O ribose methyltransferase substrate binding
B1NLA3E_00450	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_00465	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
B1NLA3E_00465	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
B1NLA3E_00470	SM00649	Ribosomal protein L11/L12
B1NLA3E_00500	SM00663	RNA polymerase I subunit A N-terminus
B1NLA3E_00520	SM00838	Elongation factor G C-terminus
B1NLA3E_00520	SM00889	Elongation factor G, domain IV
B1NLA3E_00535	SM01403	B1NLA3E_00535
B1NLA3E_00555	SM01382	B1NLA3E_00555
B1NLA3E_00555	SM01383	B1NLA3E_00555
B1NLA3E_00570	SM00322	K homology RNA-binding domain
B1NLA3E_00590	SM01374	B1NLA3E_00590
B1NLA3E_00595	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
B1NLA3E_00655	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_00675	SM00662	RNA polymerases D
B1NLA3E_00685	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00690	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00740	SM00646	B1NLA3E_00740
B1NLA3E_00755	SM01251	B1NLA3E_00755
B1NLA3E_00815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_00855	SM00052	Putative diguanylate phosphodiesterase
B1NLA3E_00855	SM00267	diguanylate cyclase
B1NLA3E_00865	SM00244	prohibitin homologues
B1NLA3E_00870	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_00870	SM01091	Transporter associated domain
B1NLA3E_00875	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_00875	SM00924	MgtE intracellular N domain
B1NLA3E_00900	SM00487	DEAD-like helicases superfamily
B1NLA3E_00900	SM00490	helicase superfamily c-terminal domain
B1NLA3E_00935	SM01005	Alanine racemase, C-terminal domain
B1NLA3E_00950	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_00950	SM00732	Likely ribonuclease with RNase H fold.
B1NLA3E_00955	SM00731	SprT homologues.
B1NLA3E_00980	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_00990	SM00881	CoA binding domain
B1NLA3E_01030	SM00883	Chaperonin 10 Kd subunit
B1NLA3E_01050	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_01070	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_01075	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_01150	SM00448	cheY-homologous receiver domain
B1NLA3E_01300	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_01320	SM00257	Lysin motif
B1NLA3E_01320	SM00641	Glycosyl hydrolases family 25
B1NLA3E_01385	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_01390	SM00829	Enoylreductase
B1NLA3E_01400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_01400	SM00895	B1NLA3E_01400
B1NLA3E_01410	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_01415	SM00954	Region found in RelA / SpoT proteins
B1NLA3E_01425	SM00893	Electron transfer flavoprotein domain
B1NLA3E_01440	SM00893	Electron transfer flavoprotein domain
B1NLA3E_01445	SM00893	Electron transfer flavoprotein domain
B1NLA3E_01510	SM00460	Transglutaminase/protease-like homologues
B1NLA3E_01525	SM01061	CAT RNA binding domain
B1NLA3E_01540	SM01001	AIR carboxylase
B1NLA3E_01550	SM00998	Adenylosuccinate lyase C-terminus
B1NLA3E_01565	SM01211	B1NLA3E_01565
B1NLA3E_01590	SM00798	AICARFT/IMPCHase bienzyme
B1NLA3E_01590	SM00851	MGS-like domain
B1NLA3E_01595	SM01209	B1NLA3E_01595
B1NLA3E_01595	SM01210	B1NLA3E_01595
B1NLA3E_01630	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B1NLA3E_01630	SM00292	breast cancer carboxy-terminal domain
B1NLA3E_01630	SM00532	Ligase N family
B1NLA3E_01670	SM00845	GatB domain
B1NLA3E_01675	SM00387	Histidine kinase-like ATPases
B1NLA3E_01675	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_01680	SM00046	Diacylglycerol kinase catalytic domain (presumed)
B1NLA3E_01740	SM00450	Rhodanese Homology Domain
B1NLA3E_01780	SM00850	LytTr DNA-binding domain
B1NLA3E_01875	SM00479	B1NLA3E_01875
B1NLA3E_01975	SM00855	Phosphoglycerate mutase family
B1NLA3E_02025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_02040	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_02045	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_02045	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B1NLA3E_02055	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_02090	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_02100	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_02100	SM00387	Histidine kinase-like ATPases
B1NLA3E_02100	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_02105	SM00448	cheY-homologous receiver domain
B1NLA3E_02105	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_02115	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_02120	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_02130	SM00479	B1NLA3E_02130
B1NLA3E_02165	SM00091	PAS domain
B1NLA3E_02165	SM00387	Histidine kinase-like ATPases
B1NLA3E_02170	SM00448	cheY-homologous receiver domain
B1NLA3E_02175	SM00387	Histidine kinase-like ATPases
B1NLA3E_02175	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_02185	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_02195	SM00487	DEAD-like helicases superfamily
B1NLA3E_02195	SM00490	helicase superfamily c-terminal domain
B1NLA3E_02230	SM00387	Histidine kinase-like ATPases
B1NLA3E_02235	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_02235	SM00448	cheY-homologous receiver domain
B1NLA3E_02280	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
B1NLA3E_02280	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
B1NLA3E_02280	SM00493	B1NLA3E_02280
B1NLA3E_02295	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_02375	SM00478	endonuclease III
B1NLA3E_02390	SM00857	Resolvase, N terminal domain
B1NLA3E_02425	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_02430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B1NLA3E_02430	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_02485	SM00354	helix_turn _helix lactose operon repressor
B1NLA3E_02490	SM01133	B1NLA3E_02490
B1NLA3E_02525	SM00387	Histidine kinase-like ATPases
B1NLA3E_02525	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_02565	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_02565	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B1NLA3E_02575	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_02610	SM00507	HNH nucleases
B1NLA3E_02615	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_02625	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_02640	SM00507	HNH nucleases
B1NLA3E_02685	SM00465	GIY-YIG type nucleases (URI domain)
B1NLA3E_02710	SM00448	cheY-homologous receiver domain
B1NLA3E_02710	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_02715	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_02715	SM00387	Histidine kinase-like ATPases
B1NLA3E_02715	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_02740	SM00448	cheY-homologous receiver domain
B1NLA3E_02740	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_02745	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_02745	SM00387	Histidine kinase-like ATPases
B1NLA3E_02745	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_02750	SM00387	Histidine kinase-like ATPases
B1NLA3E_02750	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_02775	SM01022	B1NLA3E_02775
B1NLA3E_02780	SM00060	Fibronectin type 3 domain
B1NLA3E_02780	SM00636	B1NLA3E_02780
B1NLA3E_02785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_02790	SM00052	Putative diguanylate phosphodiesterase
B1NLA3E_02790	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
B1NLA3E_02790	SM00267	diguanylate cyclase
B1NLA3E_02790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_02805	SM01068	Putative carbohydrate binding domain
B1NLA3E_02810	SM00387	Histidine kinase-like ATPases
B1NLA3E_02810	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_02830	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_02880	SM00831	Cation transporter/ATPase, N-terminus
B1NLA3E_02930	SM00487	DEAD-like helicases superfamily
B1NLA3E_02930	SM00490	helicase superfamily c-terminal domain
B1NLA3E_03040	SM01350	B1NLA3E_03040
B1NLA3E_03055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_03055	SM00895	B1NLA3E_03055
B1NLA3E_03090	SM00060	Fibronectin type 3 domain
B1NLA3E_03125	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03150	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_03160	SM00448	cheY-homologous receiver domain
B1NLA3E_03180	SM00244	prohibitin homologues
B1NLA3E_03185	SM00354	helix_turn _helix lactose operon repressor
B1NLA3E_03200	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03220	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_03225	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03230	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03275	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03360	SM00478	endonuclease III
B1NLA3E_03360	SM00525	B1NLA3E_03360
B1NLA3E_03390	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03420	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03475	SM00567	E-Z type HEAT repeats
B1NLA3E_03490	SM00763	PrkA AAA domain
B1NLA3E_03510	SM00855	Phosphoglycerate mutase family
B1NLA3E_03555	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03560	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03570	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B1NLA3E_03605	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_03605	SM00448	cheY-homologous receiver domain
B1NLA3E_03610	SM00387	Histidine kinase-like ATPases
B1NLA3E_03620	SM00387	Histidine kinase-like ATPases
B1NLA3E_03620	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_03690	SM00631	B1NLA3E_03690
B1NLA3E_03705	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B1NLA3E_03725	SM01091	Transporter associated domain
B1NLA3E_03730	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_03740	SM00387	Histidine kinase-like ATPases
B1NLA3E_03740	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_03745	SM00899	B1NLA3E_03745
B1NLA3E_03755	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_03780	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03820	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_03860	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_03885	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03900	SM00014	Acid phosphatase homologues
B1NLA3E_03905	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03910	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_03935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_03935	SM00387	Histidine kinase-like ATPases
B1NLA3E_03935	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_03940	SM00448	cheY-homologous receiver domain
B1NLA3E_03940	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_03945	SM00257	Lysin motif
B1NLA3E_03950	SM00257	Lysin motif
B1NLA3E_03965	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04020	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_04045	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_04055	SM00895	B1NLA3E_04055
B1NLA3E_04095	SM00829	Enoylreductase
B1NLA3E_04140	SM00914	B1NLA3E_04140
B1NLA3E_04170	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_04175	SM00028	Tetratricopeptide repeats
B1NLA3E_04175	SM01043	Bacterial transcriptional activator domain
B1NLA3E_04190	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04195	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04220	SM00822	B1NLA3E_04220
B1NLA3E_04250	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
B1NLA3E_04250	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
B1NLA3E_04255	SM01005	Alanine racemase, C-terminal domain
B1NLA3E_04280	SM00460	Transglutaminase/protease-like homologues
B1NLA3E_04310	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04345	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04415	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_04460	SM00710	Parallel beta-helix repeats
B1NLA3E_04490	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04585	SM00642	Alpha-amylase domain
B1NLA3E_04595	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_04635	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04655	SM00100	Cyclic nucleotide-monophosphate binding domain
B1NLA3E_04655	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_04660	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_04670	SM00852	Probable molybdopterin binding domain
B1NLA3E_04685	SM00100	Cyclic nucleotide-monophosphate binding domain
B1NLA3E_04685	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_04690	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B1NLA3E_04710	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
B1NLA3E_04715	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
B1NLA3E_04730	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04730	SM01086	C-terminal, D2-small domain, of ClpB protein
B1NLA3E_04760	SM00825	Beta-ketoacyl synthase
B1NLA3E_04795	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04800	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_04820	SM00155	Phospholipase D. Active site motifs.
B1NLA3E_04850	SM01118	B1NLA3E_04850
B1NLA3E_04855	SM00954	Region found in RelA / SpoT proteins
B1NLA3E_05020	SM00984	UDP binding domain
B1NLA3E_05045	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_05185	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_05195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_05195	SM00895	B1NLA3E_05195
B1NLA3E_05245	SM00387	Histidine kinase-like ATPases
B1NLA3E_05245	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_05250	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_05280	SM00893	Electron transfer flavoprotein domain
B1NLA3E_05285	SM00893	Electron transfer flavoprotein domain
B1NLA3E_05305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_05310	SM00342	helix_turn_helix, arabinose operon control protein
B1NLA3E_05310	SM00448	cheY-homologous receiver domain
B1NLA3E_05345	SM00014	Acid phosphatase homologues
B1NLA3E_05370	SM00448	cheY-homologous receiver domain
B1NLA3E_05370	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_05375	SM00387	Histidine kinase-like ATPases
B1NLA3E_05380	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_05440	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_05445	SM00448	cheY-homologous receiver domain
B1NLA3E_05445	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_05450	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_05450	SM00387	Histidine kinase-like ATPases
B1NLA3E_05450	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_05515	SM00342	helix_turn_helix, arabinose operon control protein
B1NLA3E_05535	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_05615	SM00052	Putative diguanylate phosphodiesterase
B1NLA3E_05650	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_05700	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_05730	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_05800	SM00838	Elongation factor G C-terminus
B1NLA3E_05845	SM00670	Large family of predicted nucleotide-binding domains
B1NLA3E_05865	SM00878	Biotin carboxylase C-terminal domain
B1NLA3E_05920	SM00257	Lysin motif
B1NLA3E_05925	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_06010	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_06075	SM00740	B1NLA3E_06075
B1NLA3E_06080	SM00740	B1NLA3E_06080
B1NLA3E_06140	SM00842	Cell division protein FtsA
B1NLA3E_06145	SM00864	Tubulin/FtsZ family, GTPase domain
B1NLA3E_06145	SM00865	Tubulin/FtsZ family, C-terminal domain
B1NLA3E_06195	SM00363	S4 RNA-binding domain
B1NLA3E_06220	SM00363	S4 RNA-binding domain
B1NLA3E_06245	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
B1NLA3E_06250	SM00851	MGS-like domain
B1NLA3E_06250	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
B1NLA3E_06265	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
B1NLA3E_06285	SM00831	Cation transporter/ATPase, N-terminus
B1NLA3E_06300	SM00072	Guanylate kinase homologues.
B1NLA3E_06305	SM01409	B1NLA3E_06305
B1NLA3E_06315	SM00487	DEAD-like helicases superfamily
B1NLA3E_06315	SM00490	helicase superfamily c-terminal domain
B1NLA3E_06340	SM00331	Sigma factor PP2C-like phosphatases
B1NLA3E_06340	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
B1NLA3E_06345	SM00220	Serine/Threonine protein kinases, catalytic domain
B1NLA3E_06345	SM00740	B1NLA3E_06345
B1NLA3E_06360	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
B1NLA3E_06380	SM01120	B1NLA3E_06380
B1NLA3E_06380	SM01121	B1NLA3E_06380
B1NLA3E_06395	SM00487	DEAD-like helicases superfamily
B1NLA3E_06395	SM00490	helicase superfamily c-terminal domain
B1NLA3E_06410	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
B1NLA3E_06415	SM00822	B1NLA3E_06415
B1NLA3E_06425	SM00358	Double-stranded RNA binding motif
B1NLA3E_06425	SM00535	Ribonuclease III family
B1NLA3E_06430	SM00968	SMC proteins Flexible Hinge Domain
B1NLA3E_06435	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06435	SM00962	SRP54-type protein, GTPase domain
B1NLA3E_06435	SM00963	SRP54-type protein, helical bundle domain
B1NLA3E_06470	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06470	SM00962	SRP54-type protein, GTPase domain
B1NLA3E_06470	SM00963	SRP54-type protein, helical bundle domain
B1NLA3E_06525	SM00881	CoA binding domain
B1NLA3E_06535	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
B1NLA3E_06535	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
B1NLA3E_06535	SM00493	B1NLA3E_06535
B1NLA3E_06555	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06555	SM01086	C-terminal, D2-small domain, of ClpB protein
B1NLA3E_06605	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_06615	SM00479	B1NLA3E_06615
B1NLA3E_06615	SM00481	DNA polymerase alpha chain like domain
B1NLA3E_06625	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_06625	SM00322	K homology RNA-binding domain
B1NLA3E_06660	SM00904	Riboflavin kinase
B1NLA3E_06665	SM01387	B1NLA3E_06665
B1NLA3E_06670	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_06670	SM00322	K homology RNA-binding domain
B1NLA3E_06700	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B1NLA3E_06710	SM01130	B1NLA3E_06710
B1NLA3E_06715	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_06730	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06730	SM00843	B1NLA3E_06730
B1NLA3E_06735	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_06735	SM00866	B1NLA3E_06735
B1NLA3E_06745	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06795	SM00852	Probable molybdopterin binding domain
B1NLA3E_06800	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06805	SM00322	K homology RNA-binding domain
B1NLA3E_06805	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_06830	SM00420	helix_turn_helix, Deoxyribose operon repressor
B1NLA3E_06830	SM01134	B1NLA3E_06830
B1NLA3E_06845	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_06865	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
B1NLA3E_06865	SM00534	ATPase domain of DNA mismatch repair MUTS family
B1NLA3E_06870	SM00853	MutL C terminal dimerisation domain
B1NLA3E_06870	SM01340	B1NLA3E_06870
B1NLA3E_06900	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06920	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_06925	SM01230	B1NLA3E_06925
B1NLA3E_06935	SM00257	Lysin motif
B1NLA3E_06940	SM00857	Resolvase, N terminal domain
B1NLA3E_06955	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_06985	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_06990	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07005	SM00448	cheY-homologous receiver domain
B1NLA3E_07120	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07175	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07195	SM00448	cheY-homologous receiver domain
B1NLA3E_07195	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_07200	SM00387	Histidine kinase-like ATPases
B1NLA3E_07200	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_07235	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07270	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_07280	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_07280	SM00895	B1NLA3E_07280
B1NLA3E_07285	SM00829	Enoylreductase
B1NLA3E_07305	SM00448	cheY-homologous receiver domain
B1NLA3E_07305	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_07310	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_07310	SM00387	Histidine kinase-like ATPases
B1NLA3E_07310	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_07330	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07335	SM00563	Phosphate acyltransferases
B1NLA3E_07355	SM00563	Phosphate acyltransferases
B1NLA3E_07380	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_07405	SM00487	DEAD-like helicases superfamily
B1NLA3E_07405	SM00490	helicase superfamily c-terminal domain
B1NLA3E_07480	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07490	SM00448	cheY-homologous receiver domain
B1NLA3E_07490	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_07495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_07495	SM00387	Histidine kinase-like ATPases
B1NLA3E_07495	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_07530	SM00893	Electron transfer flavoprotein domain
B1NLA3E_07535	SM00893	Electron transfer flavoprotein domain
B1NLA3E_07570	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_07585	SM00465	GIY-YIG type nucleases (URI domain)
B1NLA3E_07590	SM00387	Histidine kinase-like ATPases
B1NLA3E_07590	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_07615	SM00357	Cold shock protein domain
B1NLA3E_07640	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_07670	SM00346	helix_turn_helix isocitrate lyase regulation
B1NLA3E_07715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
B1NLA3E_07730	SM00878	Biotin carboxylase C-terminal domain
B1NLA3E_07755	SM00882	Coenzyme A transferase
B1NLA3E_07760	SM00882	Coenzyme A transferase
B1NLA3E_07800	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_07805	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_07845	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07850	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_07870	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_07885	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_07940	SM00267	diguanylate cyclase
B1NLA3E_07940	SM00448	cheY-homologous receiver domain
B1NLA3E_07960	SM00257	Lysin motif
B1NLA3E_07990	SM00052	Putative diguanylate phosphodiesterase
B1NLA3E_07990	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B1NLA3E_07990	SM00091	PAS domain
B1NLA3E_07990	SM00267	diguanylate cyclase
B1NLA3E_08010	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08035	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08040	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08045	SM00829	Enoylreductase
B1NLA3E_08085	SM00988	UreE urease accessory protein, N-terminal domain
B1NLA3E_08170	SM00882	Coenzyme A transferase
B1NLA3E_08175	SM00882	Coenzyme A transferase
B1NLA3E_08200	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08250	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08265	SM00903	Flavin reductase like domain
B1NLA3E_08305	SM00257	Lysin motif
B1NLA3E_08345	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_08350	SM00870	B1NLA3E_08350
B1NLA3E_08410	SM00357	Cold shock protein domain
B1NLA3E_08430	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B1NLA3E_08485	SM00989	B1NLA3E_08485
B1NLA3E_08505	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_08510	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_08560	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
B1NLA3E_08560	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
B1NLA3E_08565	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_08575	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08590	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08600	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
B1NLA3E_08600	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
B1NLA3E_08610	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_08620	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08640	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_08650	SM00420	helix_turn_helix, Deoxyribose operon repressor
B1NLA3E_08650	SM01134	B1NLA3E_08650
B1NLA3E_08730	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B1NLA3E_08735	SM00226	Low molecular weight phosphatase family
B1NLA3E_08745	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08760	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_08825	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08825	SM00930	B1NLA3E_08825
B1NLA3E_08850	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_08905	SM00052	Putative diguanylate phosphodiesterase
B1NLA3E_08905	SM00267	diguanylate cyclase
B1NLA3E_08920	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_08920	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B1NLA3E_08930	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_08955	SM00984	UDP binding domain
B1NLA3E_08975	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_09065	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_09080	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_09090	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_09180	SM00867	YceI-like domain 
B1NLA3E_09185	SM00346	helix_turn_helix isocitrate lyase regulation
B1NLA3E_09190	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B1NLA3E_09200	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_09200	SM00895	B1NLA3E_09200
B1NLA3E_09245	SM01230	B1NLA3E_09245
B1NLA3E_09270	SM00903	Flavin reductase like domain
B1NLA3E_09345	SM00479	B1NLA3E_09345
B1NLA3E_09360	SM00271	DnaJ molecular chaperone homology domain
B1NLA3E_09375	SM00487	DEAD-like helicases superfamily
B1NLA3E_09375	SM00490	helicase superfamily c-terminal domain
B1NLA3E_09440	SM00835	Cupin
B1NLA3E_09445	SM00387	Histidine kinase-like ATPases
B1NLA3E_09450	SM00448	cheY-homologous receiver domain
B1NLA3E_09450	SM00850	LytTr DNA-binding domain
B1NLA3E_09645	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_09680	SM01400	B1NLA3E_09680
B1NLA3E_09725	SM00831	Cation transporter/ATPase, N-terminus
B1NLA3E_09775	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_09775	SM00448	cheY-homologous receiver domain
B1NLA3E_09780	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_09780	SM00387	Histidine kinase-like ATPases
B1NLA3E_09780	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_09815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
B1NLA3E_09820	SM00448	cheY-homologous receiver domain
B1NLA3E_09820	SM00850	LytTr DNA-binding domain
B1NLA3E_09835	SM00028	Tetratricopeptide repeats
B1NLA3E_09840	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_09850	SM01240	B1NLA3E_09850
B1NLA3E_09960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_09960	SM00895	B1NLA3E_09960
B1NLA3E_09990	SM00871	Bacterial transcription activator, effector binding domain
B1NLA3E_10000	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10020	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_10030	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10040	SM00796	Allophanate hydrolase subunit 1
B1NLA3E_10040	SM00797	Allophanate hydrolase subunit 2
B1NLA3E_10040	SM00878	Biotin carboxylase C-terminal domain
B1NLA3E_10080	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B1NLA3E_10080	SM00091	PAS domain
B1NLA3E_10080	SM00267	diguanylate cyclase
B1NLA3E_10115	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_10115	SM00876	Biotin and Thiamin Synthesis associated domain
B1NLA3E_10135	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_10150	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
B1NLA3E_10150	SM00387	Histidine kinase-like ATPases
B1NLA3E_10150	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_10155	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10155	SM00448	cheY-homologous receiver domain
B1NLA3E_10160	SM00829	Enoylreductase
B1NLA3E_10225	SM01209	B1NLA3E_10225
B1NLA3E_10245	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_10295	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
B1NLA3E_10320	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_10320	SM00866	B1NLA3E_10320
B1NLA3E_10415	SM00914	B1NLA3E_10415
B1NLA3E_10420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_10420	SM00895	B1NLA3E_10420
B1NLA3E_10440	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10520	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_10530	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10565	SM00448	cheY-homologous receiver domain
B1NLA3E_10565	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_10570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_10570	SM00387	Histidine kinase-like ATPases
B1NLA3E_10570	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_10575	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_10655	SM00854	Bacterial capsule synthesis protein PGA_cap
B1NLA3E_10665	SM00387	Histidine kinase-like ATPases
B1NLA3E_10665	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_10670	SM01207	B1NLA3E_10670
B1NLA3E_10675	SM00636	B1NLA3E_10675
B1NLA3E_10680	SM00881	CoA binding domain
B1NLA3E_10685	SM00387	Histidine kinase-like ATPases
B1NLA3E_10685	SM00433	TopoisomeraseII
B1NLA3E_10690	SM00434	DNA Topoisomerase IV
B1NLA3E_10745	SM00636	B1NLA3E_10745
B1NLA3E_10750	SM00487	DEAD-like helicases superfamily
B1NLA3E_10750	SM00490	helicase superfamily c-terminal domain
B1NLA3E_10775	SM00100	Cyclic nucleotide-monophosphate binding domain
B1NLA3E_10775	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_10795	SM00822	B1NLA3E_10795
B1NLA3E_10815	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10825	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_10830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_10835	SM00257	Lysin motif
B1NLA3E_10840	SM00257	Lysin motif
B1NLA3E_10840	SM00636	B1NLA3E_10840
B1NLA3E_10855	SM00825	Beta-ketoacyl synthase
B1NLA3E_10920	SM00257	Lysin motif
B1NLA3E_10925	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_10925	SM00448	cheY-homologous receiver domain
B1NLA3E_10940	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
B1NLA3E_10970	SM00341	Helicase and RNase D C-terminal
B1NLA3E_10970	SM00487	DEAD-like helicases superfamily
B1NLA3E_10970	SM00490	helicase superfamily c-terminal domain
B1NLA3E_10970	SM00956	B1NLA3E_10970
B1NLA3E_11000	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_11020	SM00488	B1NLA3E_11020
B1NLA3E_11020	SM00491	B1NLA3E_11020
B1NLA3E_11040	SM00342	helix_turn_helix, arabinose operon control protein
B1NLA3E_11125	SM00909	Sporulation and spore germination
B1NLA3E_11220	SM00387	Histidine kinase-like ATPases
B1NLA3E_11220	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_11245	SM00244	prohibitin homologues
B1NLA3E_11345	SM00244	prohibitin homologues
B1NLA3E_11360	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_11420	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
B1NLA3E_11430	SM00342	helix_turn_helix, arabinose operon control protein
B1NLA3E_11435	SM00506	Appr-1"-p processing enzyme
B1NLA3E_11465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B1NLA3E_11465	SM00091	PAS domain
B1NLA3E_11465	SM00387	Histidine kinase-like ATPases
B1NLA3E_11465	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_11680	SM01230	B1NLA3E_11680
B1NLA3E_11745	SM00642	Alpha-amylase domain
B1NLA3E_11755	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_11755	SM00930	B1NLA3E_11755
B1NLA3E_11785	SM00052	Putative diguanylate phosphodiesterase
B1NLA3E_11785	SM00267	diguanylate cyclase
B1NLA3E_11825	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_11835	SM00387	Histidine kinase-like ATPases
B1NLA3E_11840	SM00448	cheY-homologous receiver domain
B1NLA3E_11840	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_11850	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_11855	SM01130	B1NLA3E_11855
B1NLA3E_11920	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_11920	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B1NLA3E_12010	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_12030	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_12090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_12130	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_12200	SM01058	CarD-like/TRCF domain
B1NLA3E_12265	SM00487	DEAD-like helicases superfamily
B1NLA3E_12265	SM00490	helicase superfamily c-terminal domain
B1NLA3E_12285	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_12295	SM00357	Cold shock protein domain
B1NLA3E_12340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_12360	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_12380	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_12400	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_12415	SM01092	CO dehydrogenase flavoprotein C-terminal domain
B1NLA3E_12420	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
B1NLA3E_12490	SM00487	DEAD-like helicases superfamily
B1NLA3E_12490	SM00490	helicase superfamily c-terminal domain
B1NLA3E_12590	SM00318	Staphylococcal nuclease homologues
B1NLA3E_12625	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
B1NLA3E_12630	SM01092	CO dehydrogenase flavoprotein C-terminal domain
B1NLA3E_12655	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_12670	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B1NLA3E_12680	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_12685	SM00155	Phospholipase D. Active site motifs.
B1NLA3E_12715	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_12715	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B1NLA3E_12725	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_12740	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B1NLA3E_12745	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B1NLA3E_12745	SM00091	PAS domain
B1NLA3E_12745	SM00387	Histidine kinase-like ATPases
B1NLA3E_12745	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_12790	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_12830	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_12905	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_12940	SM01018	B12 binding domain
B1NLA3E_12955	SM00450	Rhodanese Homology Domain
B1NLA3E_13035	SM00357	Cold shock protein domain
B1NLA3E_13040	SM00487	DEAD-like helicases superfamily
B1NLA3E_13040	SM00490	helicase superfamily c-terminal domain
B1NLA3E_13045	SM00357	Cold shock protein domain
B1NLA3E_13050	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
B1NLA3E_13095	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_13165	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_13165	SM00245	tail specific protease
B1NLA3E_13210	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_13215	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_13240	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_13260	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B1NLA3E_13305	SM00829	Enoylreductase
B1NLA3E_13310	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_13340	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_13415	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_13455	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_13540	SM00155	Phospholipase D. Active site motifs.
B1NLA3E_13640	SM00507	HNH nucleases
B1NLA3E_13690	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_13710	SM00860	SMI1 / KNR4 family
B1NLA3E_13780	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_13785	SM00387	Histidine kinase-like ATPases
B1NLA3E_13790	SM00448	cheY-homologous receiver domain
B1NLA3E_13790	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_13810	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_13815	SM00850	LytTr DNA-binding domain
B1NLA3E_13855	SM00267	diguanylate cyclase
B1NLA3E_13865	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_13870	SM00267	diguanylate cyclase
B1NLA3E_13890	SM00387	Histidine kinase-like ATPases
B1NLA3E_13890	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_13895	SM00448	cheY-homologous receiver domain
B1NLA3E_13895	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_13905	SM00342	helix_turn_helix, arabinose operon control protein
B1NLA3E_13975	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B1NLA3E_14020	SM00989	B1NLA3E_14020
B1NLA3E_14025	SM00829	Enoylreductase
B1NLA3E_14060	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_14075	SM00882	Coenzyme A transferase
B1NLA3E_14080	SM00882	Coenzyme A transferase
B1NLA3E_14225	SM00563	Phosphate acyltransferases
B1NLA3E_14355	SM00567	E-Z type HEAT repeats
B1NLA3E_14355	SM00932	Scaffold protein Nfu/NifU N terminal
B1NLA3E_14360	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_14365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_14390	SM00529	Helix-turn-helix diphteria tox regulatory element
B1NLA3E_14395	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
B1NLA3E_14395	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
B1NLA3E_14395	SM00493	B1NLA3E_14395
B1NLA3E_14410	SM00899	B1NLA3E_14410
B1NLA3E_14420	SM00357	Cold shock protein domain
B1NLA3E_14460	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
B1NLA3E_14460	SM00475	5'-3' exonuclease
B1NLA3E_14535	SM00491	B1NLA3E_14535
B1NLA3E_14540	SM00981	B1NLA3E_14540
B1NLA3E_14565	SM00487	DEAD-like helicases superfamily
B1NLA3E_14565	SM00490	helicase superfamily c-terminal domain
B1NLA3E_14575	SM00100	Cyclic nucleotide-monophosphate binding domain
B1NLA3E_14575	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_14635	SM00478	endonuclease III
B1NLA3E_14635	SM00525	B1NLA3E_14635
B1NLA3E_14660	SM00479	B1NLA3E_14660
B1NLA3E_14660	SM00487	DEAD-like helicases superfamily
B1NLA3E_14660	SM00491	B1NLA3E_14660
B1NLA3E_14700	SM00851	MGS-like domain
B1NLA3E_14755	SM00914	B1NLA3E_14755
B1NLA3E_14760	SM00028	Tetratricopeptide repeats
B1NLA3E_14800	SM00562	B1NLA3E_14800
B1NLA3E_14825	SM00411	bacterial (prokaryotic) histone like domain
B1NLA3E_14875	SM01240	B1NLA3E_14875
B1NLA3E_14880	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_14885	SM00563	Phosphate acyltransferases
B1NLA3E_14920	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
B1NLA3E_14960	SM00257	Lysin motif
B1NLA3E_14970	SM00487	DEAD-like helicases superfamily
B1NLA3E_14970	SM00490	helicase superfamily c-terminal domain
B1NLA3E_14990	SM00257	Lysin motif
B1NLA3E_15010	SM00091	PAS domain
B1NLA3E_15010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_15010	SM00387	Histidine kinase-like ATPases
B1NLA3E_15010	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_15015	SM00448	cheY-homologous receiver domain
B1NLA3E_15015	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_15035	SM00363	S4 RNA-binding domain
B1NLA3E_15130	SM00387	Histidine kinase-like ATPases
B1NLA3E_15140	SM00936	Penicillin-binding protein 5, C-terminal domain 
B1NLA3E_15150	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
B1NLA3E_15230	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_15250	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_15290	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
B1NLA3E_15305	SM01350	B1NLA3E_15305
B1NLA3E_15370	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_15390	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
B1NLA3E_15395	SM00091	PAS domain
B1NLA3E_15395	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_15410	SM00448	cheY-homologous receiver domain
B1NLA3E_15415	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_15430	SM00363	S4 RNA-binding domain
B1NLA3E_15435	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_15470	SM00878	Biotin carboxylase C-terminal domain
B1NLA3E_15515	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_15540	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_15580	SM00841	Elongation factor P, C-terminal
B1NLA3E_15580	SM01185	B1NLA3E_15580
B1NLA3E_15625	SM00450	Rhodanese Homology Domain
B1NLA3E_15650	SM00487	DEAD-like helicases superfamily
B1NLA3E_15650	SM00490	helicase superfamily c-terminal domain
B1NLA3E_15700	SM00857	Resolvase, N terminal domain
B1NLA3E_15705	SM00487	DEAD-like helicases superfamily
B1NLA3E_15720	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_15770	SM00857	Resolvase, N terminal domain
B1NLA3E_15775	SM00942	Primase C terminal 1 (PriCT-1)
B1NLA3E_15785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B1NLA3E_15800	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_15825	SM00257	Lysin motif
B1NLA3E_15825	SM00631	B1NLA3E_15825
B1NLA3E_15860	SM00028	Tetratricopeptide repeats
B1NLA3E_15910	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_15945	SM00100	Cyclic nucleotide-monophosphate binding domain
B1NLA3E_15945	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_15990	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16000	SM00518	AP endonuclease family 2
B1NLA3E_16005	SM00487	DEAD-like helicases superfamily
B1NLA3E_16005	SM00490	helicase superfamily c-terminal domain
B1NLA3E_16040	SM00400	zinc finger
B1NLA3E_16040	SM00493	B1NLA3E_16040
B1NLA3E_16055	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_16095	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_16100	SM00322	K homology RNA-binding domain
B1NLA3E_16150	SM01133	B1NLA3E_16150
B1NLA3E_16160	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_16175	SM00271	DnaJ molecular chaperone homology domain
B1NLA3E_16195	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_16200	SM00838	Elongation factor G C-terminus
B1NLA3E_16235	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_16245	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B1NLA3E_16265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_16275	SM01103	B1NLA3E_16275
B1NLA3E_16385	SM00732	Likely ribonuclease with RNase H fold.
B1NLA3E_16395	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B1NLA3E_16440	SM00028	Tetratricopeptide repeats
B1NLA3E_16440	SM00671	Sel1-like repeats.
B1NLA3E_16465	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16475	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16500	SM00287	Bacterial SH3 domain homologues
B1NLA3E_16500	SM00646	B1NLA3E_16500
B1NLA3E_16510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_16510	SM00954	Region found in RelA / SpoT proteins
B1NLA3E_16550	SM01323	B1NLA3E_16550
B1NLA3E_16565	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16570	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B1NLA3E_16600	SM00257	Lysin motif
B1NLA3E_16625	SM01317	B1NLA3E_16625
B1NLA3E_16645	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_16730	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16735	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16740	SM01208	B1NLA3E_16740
B1NLA3E_16780	SM00257	Lysin motif
B1NLA3E_16790	SM01004	Delta-aminolevulinic acid dehydratase
B1NLA3E_16830	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16830	SM00464	Found in ATP-dependent protease La (LON)
B1NLA3E_16835	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16840	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_16840	SM00994	ClpX C4-type zinc finger
B1NLA3E_16840	SM01086	C-terminal, D2-small domain, of ClpB protein
B1NLA3E_16865	SM01329	B1NLA3E_16865
B1NLA3E_16870	SM00917	LeuA allosteric (dimerisation) domain
B1NLA3E_16915	SM00909	Sporulation and spore germination
B1NLA3E_16925	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_16930	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_16965	SM00465	GIY-YIG type nucleases (URI domain)
B1NLA3E_16975	SM00893	Electron transfer flavoprotein domain
B1NLA3E_16980	SM00893	Electron transfer flavoprotein domain
B1NLA3E_17015	SM00463	Small MutS-related domain
B1NLA3E_17015	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
B1NLA3E_17015	SM00534	ATPase domain of DNA mismatch repair MUTS family
B1NLA3E_17020	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B1NLA3E_17020	SM00481	DNA polymerase alpha chain like domain
B1NLA3E_17020	SM00483	DNA polymerase X family
B1NLA3E_17035	SM00873	B3/4 domain
B1NLA3E_17035	SM00874	tRNA synthetase B5 domain
B1NLA3E_17035	SM00896	Ferredoxin-fold anticodon binding domain
B1NLA3E_17045	SM00967	RNA 2'-O ribose methyltransferase substrate binding
B1NLA3E_17085	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B1NLA3E_17110	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
B1NLA3E_17125	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
B1NLA3E_17125	SM01232	B1NLA3E_17125
B1NLA3E_17130	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
B1NLA3E_17130	SM00474	3'-5' exonuclease
B1NLA3E_17130	SM00475	5'-3' exonuclease
B1NLA3E_17130	SM00482	DNA polymerase A domain
B1NLA3E_17135	SM00091	PAS domain
B1NLA3E_17135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_17135	SM00387	Histidine kinase-like ATPases
B1NLA3E_17135	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_17140	SM00448	cheY-homologous receiver domain
B1NLA3E_17140	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_17150	SM01329	B1NLA3E_17150
B1NLA3E_17195	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_17200	SM00919	Malic enzyme, NAD binding domain
B1NLA3E_17200	SM01274	B1NLA3E_17200
B1NLA3E_17205	SM00481	DNA polymerase alpha chain like domain
B1NLA3E_17230	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_17235	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_17245	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
B1NLA3E_17245	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
B1NLA3E_17270	SM00852	Probable molybdopterin binding domain
B1NLA3E_17340	SM00981	B1NLA3E_17340
B1NLA3E_17390	SM00267	diguanylate cyclase
B1NLA3E_17395	SM00363	S4 RNA-binding domain
B1NLA3E_17395	SM01390	B1NLA3E_17395
B1NLA3E_17400	SM00363	S4 RNA-binding domain
B1NLA3E_17420	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_17430	SM00354	helix_turn _helix lactose operon repressor
B1NLA3E_17435	SM00830	Chorismate mutase type II
B1NLA3E_17465	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_17465	SM00843	B1NLA3E_17465
B1NLA3E_17515	SM00642	Alpha-amylase domain
B1NLA3E_17520	SM00046	Diacylglycerol kinase catalytic domain (presumed)
B1NLA3E_17545	SM00420	helix_turn_helix, Deoxyribose operon repressor
B1NLA3E_17550	SM00363	S4 RNA-binding domain
B1NLA3E_17605	SM00822	B1NLA3E_17605
B1NLA3E_17615	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_17650	SM00450	Rhodanese Homology Domain
B1NLA3E_17710	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_17765	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_17810	SM01234	B1NLA3E_17810
B1NLA3E_17815	SM00947	Carbonic anhydrase
B1NLA3E_17830	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
B1NLA3E_17890	SM00642	Alpha-amylase domain
B1NLA3E_17960	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_17985	SM00422	helix_turn_helix, mercury resistance
B1NLA3E_17990	SM00984	UDP binding domain
B1NLA3E_17995	SM00014	Acid phosphatase homologues
B1NLA3E_18015	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_18015	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_18025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_18040	SM00966	SpoVT / AbrB like domain 
B1NLA3E_18050	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_18050	SM00448	cheY-homologous receiver domain
B1NLA3E_18070	SM00962	SRP54-type protein, GTPase domain
B1NLA3E_18115	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_18240	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B1NLA3E_18245	SM00260	Two component signalling adaptor domain
B1NLA3E_18250	SM00260	Two component signalling adaptor domain
B1NLA3E_18255	SM00073	Histidine Phosphotransfer domain
B1NLA3E_18255	SM00260	Two component signalling adaptor domain
B1NLA3E_18255	SM00387	Histidine kinase-like ATPases
B1NLA3E_18255	SM01231	B1NLA3E_18255
B1NLA3E_18260	SM00448	cheY-homologous receiver domain
B1NLA3E_18290	SM00448	cheY-homologous receiver domain
B1NLA3E_18295	SM00138	Methyltransferase, chemotaxis proteins 
B1NLA3E_18320	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_18330	SM01060	B1NLA3E_18330
B1NLA3E_18355	SM00257	Lysin motif
B1NLA3E_18410	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_18440	SM00829	Enoylreductase
B1NLA3E_18445	SM00829	Enoylreductase
B1NLA3E_18485	SM00938	Nitrogen regulatory protein P-II
B1NLA3E_18520	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_18525	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_18535	SM00344	helix_turn_helix ASNC type
B1NLA3E_18565	SM01298	B1NLA3E_18565
B1NLA3E_18570	SM00479	B1NLA3E_18570
B1NLA3E_18710	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_18755	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_18770	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_18770	SM00930	B1NLA3E_18770
B1NLA3E_18795	SM00493	B1NLA3E_18795
B1NLA3E_18840	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_18895	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_18940	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B1NLA3E_18955	SM01131	B1NLA3E_18955
B1NLA3E_18975	SM00342	helix_turn_helix, arabinose operon control protein
B1NLA3E_18985	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
B1NLA3E_19065	SM00387	Histidine kinase-like ATPases
B1NLA3E_19065	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_19070	SM00448	cheY-homologous receiver domain
B1NLA3E_19070	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_19075	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_19090	SM00904	Riboflavin kinase
B1NLA3E_19100	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B1NLA3E_19100	SM00091	PAS domain
B1NLA3E_19100	SM00267	diguanylate cyclase
B1NLA3E_19140	SM00729	Elongator protein 3, MiaB family, Radical SAM
B1NLA3E_19145	SM00852	Probable molybdopterin binding domain
B1NLA3E_19170	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B1NLA3E_19235	SM00316	Ribosomal protein S1-like RNA-binding domain
B1NLA3E_19235	SM00357	Cold shock protein domain
B1NLA3E_19235	SM00955	B1NLA3E_19235
B1NLA3E_19255	SM01192	B1NLA3E_19255
B1NLA3E_19255	SM01193	B1NLA3E_19255
B1NLA3E_19275	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
B1NLA3E_19330	SM00028	Tetratricopeptide repeats
B1NLA3E_19395	SM00646	B1NLA3E_19395
B1NLA3E_19420	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_19425	SM00487	DEAD-like helicases superfamily
B1NLA3E_19425	SM00490	helicase superfamily c-terminal domain
B1NLA3E_19525	SM00448	cheY-homologous receiver domain
B1NLA3E_19525	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_19530	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_19530	SM00387	Histidine kinase-like ATPases
B1NLA3E_19530	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_19540	SM00448	cheY-homologous receiver domain
B1NLA3E_19540	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_19545	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_19545	SM00387	Histidine kinase-like ATPases
B1NLA3E_19545	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_19600	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_19600	SM00387	Histidine kinase-like ATPases
B1NLA3E_19600	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_19605	SM00448	cheY-homologous receiver domain
B1NLA3E_19605	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_19630	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_19635	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_19635	SM00245	tail specific protease
B1NLA3E_19665	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_19680	SM00116	Domain in cystathionine beta-synthase and other proteins.
B1NLA3E_19680	SM01091	Transporter associated domain
B1NLA3E_19715	SM00028	Tetratricopeptide repeats
B1NLA3E_19740	SM00957	SecA DEAD-like domain
B1NLA3E_19740	SM00958	SecA preprotein cross-linking domain
B1NLA3E_19745	SM00937	B1NLA3E_19745
B1NLA3E_19770	SM00487	DEAD-like helicases superfamily
B1NLA3E_19770	SM00490	helicase superfamily c-terminal domain
B1NLA3E_19775	SM00047	Lysozyme subfamily 2
B1NLA3E_19775	SM00287	Bacterial SH3 domain homologues
B1NLA3E_19840	SM00028	Tetratricopeptide repeats
B1NLA3E_19840	SM00220	Serine/Threonine protein kinases, catalytic domain
B1NLA3E_19845	SM00331	Sigma factor PP2C-like phosphatases
B1NLA3E_19845	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
B1NLA3E_19850	SM00240	Forkhead associated domain
B1NLA3E_19890	SM00240	Forkhead associated domain
B1NLA3E_19895	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_19895	SM00448	cheY-homologous receiver domain
B1NLA3E_19955	SM00646	B1NLA3E_19955
B1NLA3E_19985	SM00047	Lysozyme subfamily 2
B1NLA3E_19985	SM00287	Bacterial SH3 domain homologues
B1NLA3E_20100	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B1NLA3E_20135	SM00450	Rhodanese Homology Domain
B1NLA3E_20145	SM00450	Rhodanese Homology Domain
B1NLA3E_20150	SM00450	Rhodanese Homology Domain
B1NLA3E_20155	SM00450	Rhodanese Homology Domain
B1NLA3E_20170	SM00267	diguanylate cyclase
B1NLA3E_20170	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_20200	SM00507	HNH nucleases
B1NLA3E_20225	SM01321	B1NLA3E_20225
B1NLA3E_20305	SM00448	cheY-homologous receiver domain
B1NLA3E_20310	SM00091	PAS domain
B1NLA3E_20310	SM00387	Histidine kinase-like ATPases
B1NLA3E_20325	SM00357	Cold shock protein domain
B1NLA3E_20405	SM00387	Histidine kinase-like ATPases
B1NLA3E_20410	SM00448	cheY-homologous receiver domain
B1NLA3E_20415	SM00354	helix_turn _helix lactose operon repressor
B1NLA3E_20470	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_20485	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B1NLA3E_20525	SM00450	Rhodanese Homology Domain
B1NLA3E_20530	SM00450	Rhodanese Homology Domain
B1NLA3E_20540	SM00450	Rhodanese Homology Domain
B1NLA3E_20540	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_20575	SM00487	DEAD-like helicases superfamily
B1NLA3E_20605	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_20630	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_20640	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_20640	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
B1NLA3E_20660	SM00825	Beta-ketoacyl synthase
B1NLA3E_20685	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_20700	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_20700	SM00930	B1NLA3E_20700
B1NLA3E_20720	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B1NLA3E_20735	SM00347	helix_turn_helix multiple antibiotic resistance protein
B1NLA3E_20745	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_20755	SM00062	Bacterial periplasmic substrate-binding proteins
B1NLA3E_20810	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_20830	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_20840	SM01321	B1NLA3E_20840
B1NLA3E_20845	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_20850	SM00870	B1NLA3E_20850
B1NLA3E_20860	SM00028	Tetratricopeptide repeats
B1NLA3E_20865	SM00530	Helix-turn-helix XRE-family like proteins 
B1NLA3E_20890	SM00984	UDP binding domain
B1NLA3E_20975	SM00257	Lysin motif
B1NLA3E_20980	SM00098	Alkaline phosphatase homologues
B1NLA3E_20990	SM00354	helix_turn _helix lactose operon repressor
B1NLA3E_21000	SM00858	B1NLA3E_21000
B1NLA3E_21020	SM00861	Transketolase, pyrimidine binding domain
B1NLA3E_21045	SM00345	helix_turn_helix gluconate operon transcriptional repressor
B1NLA3E_21045	SM00895	B1NLA3E_21045
B1NLA3E_21060	SM00487	DEAD-like helicases superfamily
B1NLA3E_21060	SM00490	helicase superfamily c-terminal domain
B1NLA3E_21140	SM00642	Alpha-amylase domain
B1NLA3E_21180	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_21230	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_21270	SM00893	Electron transfer flavoprotein domain
B1NLA3E_21275	SM00893	Electron transfer flavoprotein domain
B1NLA3E_21440	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_21515	SM00226	Low molecular weight phosphatase family
B1NLA3E_21540	SM00937	B1NLA3E_21540
B1NLA3E_21590	SM00357	Cold shock protein domain
B1NLA3E_21590	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_21590	SM00959	Rho termination factor, N-terminal domain
B1NLA3E_21615	SM00448	cheY-homologous receiver domain
B1NLA3E_21675	SM00155	Phospholipase D. Active site motifs.
B1NLA3E_21695	SM00836	DALR anticodon binding domain
B1NLA3E_21695	SM01016	Arginyl tRNA synthetase N terminal dom
B1NLA3E_21740	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B1NLA3E_21800	SM00852	Probable molybdopterin binding domain
B1NLA3E_21805	SM00852	Probable molybdopterin binding domain
B1NLA3E_21835	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
B1NLA3E_21860	SM00100	Cyclic nucleotide-monophosphate binding domain
B1NLA3E_21860	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_21905	SM00100	Cyclic nucleotide-monophosphate binding domain
B1NLA3E_21905	SM00419	helix_turn_helix, cAMP Regulatory protein
B1NLA3E_21935	SM00421	helix_turn_helix, Lux Regulon
B1NLA3E_21935	SM00448	cheY-homologous receiver domain
B1NLA3E_21940	SM00382	ATPases associated with a variety of cellular activities
B1NLA3E_21955	SM00710	Parallel beta-helix repeats
B1NLA3E_21975	SM00363	S4 RNA-binding domain
B1NLA3E_22040	SM00636	B1NLA3E_22040
B1NLA3E_22085	SM00764	Citrate lyase ligase C-terminal domain
B1NLA3E_22090	SM00091	PAS domain
B1NLA3E_22090	SM00387	Histidine kinase-like ATPases
B1NLA3E_22095	SM00448	cheY-homologous receiver domain
B1NLA3E_22130	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B1NLA3E_22135	SM00849	Metallo-beta-lactamase superfamily
B1NLA3E_22150	SM00091	PAS domain
B1NLA3E_22150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
B1NLA3E_22150	SM00387	Histidine kinase-like ATPases
B1NLA3E_22150	SM00388	His Kinase A (phosphoacceptor) domain
B1NLA3E_22155	SM00448	cheY-homologous receiver domain
B1NLA3E_22155	SM00862	Transcriptional regulatory protein, C terminal
B1NLA3E_22160	SM00257	Lysin motif
B1NLA3E_22160	SM01208	B1NLA3E_22160
B1NLA3E_22165	SM00788	Adenylosuccinate synthetase
B1NLA3E_22180	SM00267	diguanylate cyclase
B1NLA3E_22245	SM00470	ParB-like nuclease domain
B1NLA3E_22255	SM00470	ParB-like nuclease domain
B1NLA3E_22265	SM01228	B1NLA3E_22265
B1NLA3E_22275	SM00393	Putative single-stranded nucleic acids-binding domain
B1NLA3E_22275	SM01245	B1NLA3E_22275
