locus-tag class description CJO35_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal CJO35_00005 IPR024633 DnaA N-terminal domain CJO35_00005 IPR020591 Chromosomal replication control, initiator DnaA-like CJO35_00005 IPR001957 Chromosomal replication control, initiator DnaA CJO35_00005 IPR003593 AAA+ ATPase domain CJO35_00005 IPR038454 DnaA, N-terminal domain superfamily CJO35_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00005 IPR010921 Trp repressor/replication initiator CJO35_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CJO35_00005 IPR013317 Chromosomal replication initiator protein DnaA CJO35_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CJO35_00010 IPR022637 DNA polymerase III, beta sliding clamp, central CJO35_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CJO35_00010 IPR001001 DNA polymerase III, beta sliding clamp CJO35_00015 IPR014330 RNA-binding S4-related,YaaA CJO35_00015 IPR002942 RNA-binding S4 domain CJO35_00015 IPR036986 RNA-binding S4 domain superfamily CJO35_00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00020 IPR018078 DNA-binding, RecF, conserved site CJO35_00020 IPR003395 RecF/RecN/SMC, N-terminal CJO35_00020 IPR042174 DNA-binding RecF, domain 2 CJO35_00020 IPR001238 DNA-binding, RecF CJO35_00025 IPR007169 Extracellular matrix regulatory protein A CJO35_00030 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CJO35_00030 IPR002288 DNA gyrase B subunit, C-terminal CJO35_00030 IPR011557 DNA gyrase, subunit B CJO35_00030 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_00030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_00030 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_00030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_00030 IPR001241 DNA topoisomerase, type IIA CJO35_00030 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CJO35_00030 IPR034160 DNA gyrase subunit B, TOPRIM domain CJO35_00030 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CJO35_00030 IPR018522 DNA topoisomerase, type IIA, conserved site CJO35_00030 IPR006171 TOPRIM domain CJO35_00035 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CJO35_00035 IPR005743 DNA gyrase, subunit A CJO35_00035 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CJO35_00035 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CJO35_00035 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CJO35_00035 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CJO35_00035 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CJO35_00065 IPR026988 YaaC-like protein CJO35_00070 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CJO35_00070 IPR005990 Inosine-5'-monophosphate dehydrogenase CJO35_00070 IPR000644 CBS domain CJO35_00070 IPR001093 IMP dehydrogenase/GMP reductase CJO35_00070 IPR013785 Aldolase-type TIM barrel CJO35_00075 IPR012338 Beta-lactamase/transpeptidase-like CJO35_00075 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CJO35_00075 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CJO35_00075 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CJO35_00075 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CJO35_00075 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CJO35_00080 IPR011060 Ribulose-phosphate binding barrel CJO35_00080 IPR013785 Aldolase-type TIM barrel CJO35_00080 IPR033755 PdxS/SNZ N-terminal domain CJO35_00080 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ CJO35_00085 IPR021196 PdxT/SNO family, conserved site CJO35_00085 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO CJO35_00085 IPR029062 Class I glutamine amidotransferase-like CJO35_00090 IPR033729 Serine-tRNA ligase catalytic core domain CJO35_00090 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CJO35_00090 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CJO35_00090 IPR015866 Serine-tRNA synthetase, type1, N-terminal CJO35_00090 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CJO35_00090 IPR002317 Serine-tRNA ligase, type1 CJO35_00090 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_00095 IPR018193 Glycerate kinase, flavodoxin-like fold CJO35_00095 IPR004381 Glycerate kinase CJO35_00095 IPR018197 Glycerate kinase, restriction-enzyme-like fold CJO35_00095 IPR036129 Glycerate kinase superfamily CJO35_00100 IPR003474 Gluconate transporter CJO35_00105 IPR025736 PucR C-terminal helix-turn-helix domain CJO35_00105 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CJO35_00105 IPR008599 Putative sugar diacid recognition CJO35_00105 IPR041522 CdaR, GGDEF-like domain CJO35_00120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00120 IPR031314 Deoxynucleoside kinase domain CJO35_00120 IPR002624 Deoxynucleoside kinase CJO35_00125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00125 IPR031314 Deoxynucleoside kinase domain CJO35_00125 IPR002624 Deoxynucleoside kinase CJO35_00130 IPR011583 Chitinase II CJO35_00130 IPR001223 Glycoside hydrolase family 18, catalytic domain CJO35_00130 IPR017853 Glycoside hydrolase superfamily CJO35_00130 IPR041704 CFLE, GH18 catalytic domain CJO35_00130 IPR018392 LysM domain CJO35_00130 IPR036779 LysM domain superfamily CJO35_00130 IPR029070 Chitinase insertion domain superfamily CJO35_00135 IPR036380 Isochorismatase-like superfamily CJO35_00135 IPR000868 Isochorismatase-like CJO35_00140 IPR016193 Cytidine deaminase-like CJO35_00140 IPR028883 tRNA-specific adenosine deaminase CJO35_00140 IPR016192 APOBEC/CMP deaminase, zinc-binding CJO35_00140 IPR002125 Cytidine and deoxycytidylate deaminase domain CJO35_00150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00150 IPR012763 DNA polymerase III, subunit gamma/ tau CJO35_00150 IPR022754 DNA polymerase III, gamma subunit, domain III CJO35_00150 IPR003593 AAA+ ATPase domain CJO35_00150 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CJO35_00150 IPR001270 ClpA/B family CJO35_00155 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJO35_00155 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CJO35_00160 IPR034137 RecR, TOPRIM domain CJO35_00160 IPR006171 TOPRIM domain CJO35_00160 IPR015967 Recombination protein RecR, conserved site CJO35_00160 IPR023627 Recombination protein RecR CJO35_00160 IPR023628 Recombination protein RecR, C4-type zinc finger CJO35_00160 IPR000093 DNA recombination protein RecR CJO35_00165 IPR019644 Protein of unknown function DUF2508 CJO35_00170 IPR010001 SigmaK-factor processing regulatory BofA CJO35_00200 IPR019700 Anti-sigma-G factor Gin CJO35_00205 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein CJO35_00210 IPR008863 Toxic anion resistance CJO35_00215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_00215 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_00215 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CJO35_00215 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CJO35_00215 IPR000310 Orn/Lys/Arg decarboxylase, major domain CJO35_00220 IPR039430 Thymidylate kinase-like domain CJO35_00220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00220 IPR018094 Thymidylate kinase CJO35_00220 IPR018095 Thymidylate kinase, conserved site CJO35_00225 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_00225 IPR010375 Cyclic-di-AMP receptor CJO35_00225 IPR011322 Nitrogen regulatory PII-like, alpha/beta CJO35_00230 IPR005585 Protein of unknown function DUF327 CJO35_00230 IPR024042 TM1646-like domain superfamily CJO35_00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00235 IPR015199 DNA polymerase III, delta subunit, C-terminal CJO35_00235 IPR004622 DNA polymerase III, delta prime subunit CJO35_00240 IPR007557 PSP1, C-terminal CJO35_00245 IPR010377 Initiation control protein YabA CJO35_00250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_00250 IPR007848 Methyltransferase small domain CJO35_00255 IPR000305 GIY-YIG endonuclease CJO35_00255 IPR035901 GIY-YIG endonuclease superfamily CJO35_00260 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CJO35_00260 IPR008189 rRNA small subunit methyltransferase I CJO35_00260 IPR014776 Tetrapyrrole methylase, subdomain 2 CJO35_00260 IPR014777 Tetrapyrrole methylase, subdomain 1 CJO35_00260 IPR035996 Tetrapyrrole methylase superfamily CJO35_00260 IPR000878 Tetrapyrrole methylase CJO35_00265 IPR037914 SpoVT-AbrB domain superfamily CJO35_00265 IPR007159 SpoVT-AbrB domain CJO35_00265 IPR040678 AbrB, C-terminal CJO35_00270 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CJO35_00270 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CJO35_00270 IPR023457 Methionine-tRNA synthetase, type 2 CJO35_00270 IPR002547 tRNA-binding domain CJO35_00270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_00270 IPR012340 Nucleic acid-binding, OB-fold CJO35_00270 IPR014758 Methionyl-tRNA synthetase CJO35_00270 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CJO35_00270 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CJO35_00270 IPR033911 Methioninyl-tRNA synthetase core domain CJO35_00270 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_00270 IPR015413 Methionyl/Leucyl tRNA synthetase CJO35_00275 IPR032466 Metal-dependent hydrolase CJO35_00275 IPR015991 Uncharacterised hydrolase TatD-type CJO35_00275 IPR001130 TatD family CJO35_00275 IPR018228 Deoxyribonuclease, TatD-related, conserved site CJO35_00280 IPR036908 RlpA-like domain superfamily CJO35_00280 IPR011098 G5 domain CJO35_00280 IPR010611 3D domain CJO35_00280 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 CJO35_00285 IPR004466 Ribonuclease M5 CJO35_00285 IPR025156 Ribonuclease M5, C-terminal domain CJO35_00285 IPR034141 Ribonuclease M5-like, TOPRIM domain CJO35_00285 IPR006171 TOPRIM domain CJO35_00290 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CJO35_00290 IPR023165 rRNA adenine dimethylase-like CJO35_00290 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CJO35_00290 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CJO35_00290 IPR011530 Ribosomal RNA adenine dimethylase CJO35_00290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_00295 IPR008764 Peptidase U57, YabG CJO35_00300 IPR009366 Protein Veg CJO35_00305 IPR001448 Small acid-soluble spore protein, alpha/beta-type CJO35_00305 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CJO35_00305 IPR038300 SASP, alpha/beta-type superfamily CJO35_00310 IPR006204 GHMP kinase N-terminal domain CJO35_00310 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CJO35_00310 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_00310 IPR036554 GHMP kinase, C-terminal domain superfamily CJO35_00310 IPR013750 GHMP kinase, C-terminal domain CJO35_00310 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_00315 IPR036390 Winged helix DNA-binding domain superfamily CJO35_00315 IPR000836 Phosphoribosyltransferase domain CJO35_00315 IPR029057 Phosphoribosyltransferase-like CJO35_00315 IPR015265 Bacterial purine repressor, N-terminal CJO35_00315 IPR010078 Pur operon repressor CJO35_00315 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_00320 IPR006175 YjgF/YER057c/UK114 family CJO35_00320 IPR019897 RidA, conserved site CJO35_00320 IPR006056 RidA family CJO35_00320 IPR035959 RutC-like superfamily CJO35_00325 IPR036751 Stage V sporulation protein G superfamily CJO35_00325 IPR007170 Stage V sporulation protein G CJO35_00330 IPR011004 Trimeric LpxA-like superfamily CJO35_00330 IPR001451 Hexapeptide repeat CJO35_00330 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CJO35_00330 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_00330 IPR005835 Nucleotidyl transferase domain CJO35_00330 IPR018357 Hexapeptide transferase, conserved site CJO35_00330 IPR038009 GlmU, C-terminal LbH domain CJO35_00335 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CJO35_00335 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CJO35_00335 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CJO35_00335 IPR000836 Phosphoribosyltransferase domain CJO35_00335 IPR005946 Ribose-phosphate pyrophosphokinase CJO35_00335 IPR029057 Phosphoribosyltransferase-like CJO35_00340 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CJO35_00340 IPR029751 Ribosomal protein L25 CJO35_00340 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CJO35_00340 IPR020057 Ribosomal protein L25, beta domain CJO35_00340 IPR037121 Ribosomal protein L25, C-terminal CJO35_00340 IPR001021 Ribosomal protein L25, long-form CJO35_00345 IPR001328 Peptidyl-tRNA hydrolase CJO35_00345 IPR018171 Peptidyl-tRNA hydrolase, conserved site CJO35_00345 IPR036416 Peptidyl-tRNA hydrolase superfamily CJO35_00350 IPR020115 Anti-sigma-F factor Fin CJO35_00355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00355 IPR037235 TRCF-like, C-terminal domain CJO35_00355 IPR005118 Transcription-repair-coupling factor, C-terminal domain CJO35_00355 IPR003711 CarD-like/TRCF domain CJO35_00355 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_00355 IPR011545 DEAD/DEAH box helicase domain CJO35_00355 IPR036101 CarD-like/TRCF domain superfamily CJO35_00355 IPR041471 UvrB, interaction domain CJO35_00355 IPR001650 Helicase, C-terminal CJO35_00355 IPR004576 Transcription-repair coupling factor CJO35_00360 IPR007159 SpoVT-AbrB domain CJO35_00360 IPR014213 Sporulation stage V, protein T CJO35_00360 IPR037914 SpoVT-AbrB domain superfamily CJO35_00360 IPR039472 Sporulation stage V protein T, GAF domain CJO35_00360 IPR029016 GAF-like domain superfamily CJO35_00365 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CJO35_00365 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CJO35_00365 IPR002797 Polysaccharide biosynthesis protein CJO35_00370 IPR014777 Tetrapyrrole methylase, subdomain 1 CJO35_00370 IPR011551 NTP pyrophosphohydrolase MazG CJO35_00370 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted CJO35_00370 IPR035013 YabN, N-terminal CJO35_00370 IPR035996 Tetrapyrrole methylase superfamily CJO35_00370 IPR000878 Tetrapyrrole methylase CJO35_00370 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CJO35_00375 IPR002942 RNA-binding S4 domain CJO35_00375 IPR025490 RNA-binding protein, HP1423 type CJO35_00375 IPR036986 RNA-binding S4 domain superfamily CJO35_00380 IPR012504 Sporulation protein YabP CJO35_00380 IPR022476 Sporulation protein YabP/YqfC CJO35_00380 IPR038705 YabP superfamily CJO35_00385 IPR014242 Spore cortex biosynthesis protein, YabQ CJO35_00385 IPR019074 Spore cortex biosynthesis protein, YabQ-like CJO35_00390 IPR007060 Septum formation initiator FtsL/DivIC CJO35_00390 IPR039076 Cell division protein DivIC CJO35_00395 IPR003029 S1 domain CJO35_00395 IPR022967 RNA-binding domain, S1 CJO35_00395 IPR012340 Nucleic acid-binding, OB-fold CJO35_00410 IPR001932 PPM-type phosphatase domain CJO35_00410 IPR036457 PPM-type phosphatase domain superfamily CJO35_00410 IPR014221 Sporulation stage II, protein E CJO35_00415 IPR036465 von Willebrand factor A-like domain superfamily CJO35_00415 IPR002035 von Willebrand factor, type A CJO35_00420 IPR017441 Protein kinase, ATP binding site CJO35_00420 IPR000719 Protein kinase domain CJO35_00420 IPR011009 Protein kinase-like domain superfamily CJO35_00425 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CJO35_00425 IPR012094 tRNA(Ile)-lysidine synthase CJO35_00425 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CJO35_00425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_00425 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain CJO35_00425 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CJO35_00435 IPR003959 ATPase, AAA-type, core CJO35_00435 IPR037219 Peptidase M41-like CJO35_00435 IPR003960 ATPase, AAA-type, conserved site CJO35_00435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00435 IPR011546 Peptidase M41, FtsH extracellular CJO35_00435 IPR000642 Peptidase M41 CJO35_00435 IPR003593 AAA+ ATPase domain CJO35_00435 IPR005936 Peptidase, FtsH CJO35_00435 IPR041569 AAA ATPase, AAA+ lid domain CJO35_00440 IPR004619 Type III pantothenate kinase CJO35_00445 IPR000397 Heat shock protein Hsp33 CJO35_00445 IPR016153 Heat shock protein Hsp33, N-terminal CJO35_00445 IPR016154 Heat shock protein Hsp33, C-terminal CJO35_00450 IPR027304 Trigger factor/SurA domain superfamily CJO35_00450 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CJO35_00450 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CJO35_00455 IPR005859 Cysteine synthase CysK CJO35_00455 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJO35_00455 IPR001926 Pyridoxal-phosphate dependent enzyme CJO35_00455 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CJO35_00455 IPR005856 Cysteine synthase CJO35_00465 IPR005801 ADC synthase CJO35_00465 IPR019999 Anthranilate synthase component I-like CJO35_00465 IPR015890 Chorismate-utilising enzyme, C-terminal CJO35_00465 IPR006805 Anthranilate synthase component I, N-terminal CJO35_00470 IPR017926 Glutamine amidotransferase CJO35_00470 IPR029062 Class I glutamine amidotransferase-like CJO35_00470 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CJO35_00475 IPR036038 Aminotransferase-like, PLP-dependent enzymes CJO35_00475 IPR018300 Aminotransferase, class IV, conserved site CJO35_00475 IPR001544 Aminotransferase class IV CJO35_00475 IPR017824 Aminodeoxychorismate lyase, class IV CJO35_00480 IPR000489 Pterin-binding domain CJO35_00480 IPR006390 Dihydropteroate synthase CJO35_00480 IPR011005 Dihydropteroate synthase-like CJO35_00485 IPR006157 Dihydroneopterin aldolase/epimerase domain CJO35_00485 IPR006156 Dihydroneopterin aldolase CJO35_00490 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CJO35_00490 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CJO35_00495 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_00495 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_00500 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CJO35_00500 IPR035587 DUS-like, FMN-binding domain CJO35_00500 IPR013785 Aldolase-type TIM barrel CJO35_00500 IPR018517 tRNA-dihydrouridine synthase, conserved site CJO35_00500 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CJO35_00500 IPR001269 tRNA-dihydrouridine synthase CJO35_00505 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CJO35_00505 IPR002313 Lysine-tRNA ligase, class II CJO35_00505 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II CJO35_00505 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CJO35_00505 IPR012340 Nucleic acid-binding, OB-fold CJO35_00505 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CJO35_00505 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_00585 IPR041902 CtsR, N-terminal domain superfamily CJO35_00585 IPR040465 CtsR, N-terminal HTH domain CJO35_00585 IPR041908 CtsR, C-terminal domain superfamily CJO35_00585 IPR041473 CtsR, C-terminal dimerization domain CJO35_00585 IPR008463 Transcriptional regulator CtsR CJO35_00590 IPR025542 YacH protein CJO35_00590 IPR036876 UVR domain superfamily CJO35_00590 IPR001943 UVR domain CJO35_00595 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CJO35_00595 IPR022414 ATP:guanido phosphotransferase, catalytic domain CJO35_00595 IPR022415 ATP:guanido phosphotransferase active site CJO35_00595 IPR000749 ATP:guanido phosphotransferase CJO35_00595 IPR023660 Protein arginine kinase CJO35_00600 IPR018368 ClpA/B, conserved site 1 CJO35_00600 IPR001270 ClpA/B family CJO35_00600 IPR004176 Clp, N-terminal CJO35_00600 IPR036628 Clp, N-terminal domain superfamily CJO35_00600 IPR019489 Clp ATPase, C-terminal CJO35_00600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00600 IPR001943 UVR domain CJO35_00600 IPR003959 ATPase, AAA-type, core CJO35_00600 IPR028299 ClpA/B, conserved site 2 CJO35_00600 IPR041546 ClpA/ClpB, AAA lid domain CJO35_00600 IPR003593 AAA+ ATPase domain CJO35_00605 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CJO35_00605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00605 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_00605 IPR041166 LapB, rubredoxin metal binding domain CJO35_00605 IPR003593 AAA+ ATPase domain CJO35_00605 IPR004504 DNA repair protein RadA CJO35_00605 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_00610 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily CJO35_00610 IPR038331 DisA, linker domain superfamily CJO35_00610 IPR018906 DNA integrity scanning, DisA, linker region CJO35_00610 IPR003390 DNA integrity scanning protein, DisA, N-terminal CJO35_00610 IPR023763 DNA integrity scanning protein, DisA CJO35_00610 IPR010994 RuvA domain 2-like CJO35_00615 IPR029060 PIN-like domain superfamily CJO35_00615 IPR002716 PIN domain CJO35_00615 IPR002792 TRAM domain CJO35_00620 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_00620 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CJO35_00620 IPR034683 Cytidylyltransferase IspD/TarI CJO35_00620 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJO35_00625 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CJO35_00625 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CJO35_00625 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CJO35_00630 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CJO35_00630 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CJO35_00630 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CJO35_00630 IPR033910 Glutamyl-tRNA synthetase CJO35_00630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_00630 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CJO35_00630 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CJO35_00630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_00635 IPR011004 Trimeric LpxA-like superfamily CJO35_00635 IPR005881 Serine O-acetyltransferase CJO35_00635 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CJO35_00635 IPR001451 Hexapeptide repeat CJO35_00640 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CJO35_00640 IPR032678 tRNA synthetases class I, catalytic domain CJO35_00640 IPR015803 Cysteine-tRNA ligase CJO35_00640 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CJO35_00640 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CJO35_00640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_00645 IPR036389 Ribonuclease III, endonuclease domain superfamily CJO35_00645 IPR008226 Mini-ribonuclease 3 family CJO35_00645 IPR000999 Ribonuclease III domain CJO35_00650 IPR029028 Alpha/beta knot methyltransferases CJO35_00650 IPR029064 50S ribosomal protein L30e-like CJO35_00650 IPR004441 RNA methyltransferase TrmH family CJO35_00650 IPR001537 tRNA/rRNA methyltransferase, SpoU type CJO35_00650 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CJO35_00650 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJO35_00655 IPR010298 Protein of unknown function DUF901 CJO35_00660 IPR014218 RNA polymerase sigma-H type CJO35_00660 IPR000792 Transcription regulator LuxR, C-terminal CJO35_00660 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_00660 IPR000943 RNA polymerase sigma-70 CJO35_00660 IPR013325 RNA polymerase sigma factor, region 2 CJO35_00660 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_00660 IPR007627 RNA polymerase sigma-70 region 2 CJO35_00660 IPR014284 RNA polymerase sigma-70 like domain CJO35_00660 IPR016371 RNA polymerase sigma-H factor CJO35_00665 IPR018264 Ribosomal protein L33, conserved site CJO35_00665 IPR011332 Zinc-binding ribosomal protein CJO35_00665 IPR001705 Ribosomal protein L33 CJO35_00665 IPR038584 Ribosomal protein L33 superfamily CJO35_00670 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CJO35_00670 IPR038379 SecE superfamily CJO35_00670 IPR005807 SecE subunit of protein translocation complex, bacterial-like CJO35_00675 IPR008991 Translation protein SH3-like domain superfamily CJO35_00675 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CJO35_00675 IPR001062 Transcription antitermination protein, NusG CJO35_00675 IPR014722 Ribosomal protein L2, domain 2 CJO35_00675 IPR036735 NusG, N-terminal domain superfamily CJO35_00675 IPR006645 NusG, N-terminal CJO35_00675 IPR005824 KOW CJO35_00680 IPR020784 Ribosomal protein L11, N-terminal CJO35_00680 IPR020785 Ribosomal protein L11, conserved site CJO35_00680 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CJO35_00680 IPR020783 Ribosomal protein L11, C-terminal CJO35_00680 IPR006519 Ribosomal protein L11, bacterial-type CJO35_00680 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CJO35_00680 IPR000911 Ribosomal protein L11/L12 CJO35_00685 IPR002143 Ribosomal protein L1 CJO35_00685 IPR023674 Ribosomal protein L1-like CJO35_00685 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CJO35_00685 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CJO35_00685 IPR023673 Ribosomal protein L1, conserved site CJO35_00685 IPR005878 Ribosomal protein L1, bacterial-type CJO35_00690 IPR001790 Ribosomal protein L10P CJO35_00690 IPR002363 Ribosomal protein L10, eubacterial, conserved site CJO35_00690 IPR022973 Ribosomal protein L10 CJO35_00695 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CJO35_00695 IPR008932 Ribosomal protein L7/L12, oligomerisation CJO35_00695 IPR013823 Ribosomal protein L7/L12, C-terminal CJO35_00695 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJO35_00695 IPR000206 Ribosomal protein L7/L12 CJO35_00700 IPR007848 Methyltransferase small domain CJO35_00700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_00705 IPR007645 RNA polymerase Rpb2, domain 3 CJO35_00705 IPR007641 RNA polymerase Rpb2, domain 7 CJO35_00705 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily CJO35_00705 IPR007642 RNA polymerase Rpb2, domain 2 CJO35_00705 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CJO35_00705 IPR015712 DNA-directed RNA polymerase, subunit 2 CJO35_00705 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CJO35_00705 IPR014724 RNA polymerase Rpb2, OB-fold CJO35_00705 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CJO35_00705 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CJO35_00705 IPR007121 RNA polymerase, beta subunit, conserved site CJO35_00705 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CJO35_00705 IPR007644 RNA polymerase, beta subunit, protrusion CJO35_00710 IPR007066 RNA polymerase Rpb1, domain 3 CJO35_00710 IPR007083 RNA polymerase Rpb1, domain 4 CJO35_00710 IPR007081 RNA polymerase Rpb1, domain 5 CJO35_00710 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CJO35_00710 IPR006592 RNA polymerase, N-terminal CJO35_00710 IPR007080 RNA polymerase Rpb1, domain 1 CJO35_00710 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CJO35_00710 IPR000722 RNA polymerase, alpha subunit CJO35_00710 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CJO35_00715 IPR023460 Ribosomal protein L7Ae, putative CJO35_00715 IPR000948 Ribosomal protein L7Ae, prokaryotes CJO35_00715 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CJO35_00715 IPR029064 50S ribosomal protein L30e-like CJO35_00720 IPR012340 Nucleic acid-binding, OB-fold CJO35_00720 IPR006032 Ribosomal protein S12/S23 CJO35_00720 IPR005679 Ribosomal protein S12, bacterial-type CJO35_00725 IPR005717 Ribosomal protein S7, bacterial/organellar-type CJO35_00725 IPR036823 Ribosomal protein S7 domain superfamily CJO35_00725 IPR023798 Ribosomal protein S7 domain CJO35_00725 IPR020606 Ribosomal protein S7, conserved site CJO35_00725 IPR000235 Ribosomal protein S5/S7 CJO35_00730 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_00730 IPR041095 Elongation Factor G, domain II CJO35_00730 IPR009022 Elongation factor G, domain III CJO35_00730 IPR035647 EF-G domain III/V-like CJO35_00730 IPR035649 EFG, domain V CJO35_00730 IPR000640 Elongation factor EFG, domain V-like CJO35_00730 IPR004161 Translation elongation factor EFTu-like, domain 2 CJO35_00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00730 IPR005517 Translation elongation factor EFG/EF2, domain IV CJO35_00730 IPR004540 Translation elongation factor EFG/EF2 CJO35_00730 IPR000795 Transcription factor, GTP-binding domain CJO35_00730 IPR005225 Small GTP-binding protein domain CJO35_00730 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_00730 IPR031157 Tr-type G domain, conserved site CJO35_00730 IPR009000 Translation protein, beta-barrel domain superfamily CJO35_00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00735 IPR031157 Tr-type G domain, conserved site CJO35_00735 IPR033720 Elongation factor Tu, domain 2 CJO35_00735 IPR004161 Translation elongation factor EFTu-like, domain 2 CJO35_00735 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CJO35_00735 IPR005225 Small GTP-binding protein domain CJO35_00735 IPR000795 Transcription factor, GTP-binding domain CJO35_00735 IPR009000 Translation protein, beta-barrel domain superfamily CJO35_00735 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CJO35_00735 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CJO35_00735 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CJO35_00740 IPR036838 Ribosomal protein S10 domain superfamily CJO35_00740 IPR027486 Ribosomal protein S10 domain CJO35_00740 IPR018268 Ribosomal protein S10, conserved site CJO35_00740 IPR001848 Ribosomal protein S10 CJO35_00745 IPR009000 Translation protein, beta-barrel domain superfamily CJO35_00745 IPR019926 Ribosomal protein L3, conserved site CJO35_00745 IPR019927 Ribosomal protein L3, bacterial/organelle-type CJO35_00745 IPR000597 Ribosomal protein L3 CJO35_00750 IPR023574 Ribosomal protein L4 domain superfamily CJO35_00750 IPR013005 50S ribosomal protein uL4 CJO35_00750 IPR002136 Ribosomal protein L4/L1e CJO35_00755 IPR012678 Ribosomal protein L23/L15e core domain superfamily CJO35_00755 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CJO35_00755 IPR013025 Ribosomal protein L25/L23 CJO35_00755 IPR001014 Ribosomal protein L23/L25, conserved site CJO35_00760 IPR022666 Ribosomal Proteins L2, RNA binding domain CJO35_00760 IPR008991 Translation protein SH3-like domain superfamily CJO35_00760 IPR014726 Ribosomal protein L2, domain 3 CJO35_00760 IPR022671 Ribosomal protein L2, conserved site CJO35_00760 IPR022669 Ribosomal protein L2, C-terminal CJO35_00760 IPR005880 Ribosomal protein L2, bacterial/organellar-type CJO35_00760 IPR002171 Ribosomal protein L2 CJO35_00760 IPR014722 Ribosomal protein L2, domain 2 CJO35_00760 IPR012340 Nucleic acid-binding, OB-fold CJO35_00765 IPR002222 Ribosomal protein S19/S15 CJO35_00765 IPR020934 Ribosomal protein S19 conserved site CJO35_00765 IPR023575 Ribosomal protein S19, superfamily CJO35_00765 IPR005732 Ribosomal protein S19, bacterial-type CJO35_00770 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CJO35_00770 IPR036394 Ribosomal protein L22/L17 superfamily CJO35_00770 IPR018260 Ribosomal protein L22/L17, conserved site CJO35_00770 IPR001063 Ribosomal protein L22/L17 CJO35_00775 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CJO35_00775 IPR001351 Ribosomal protein S3, C-terminal CJO35_00775 IPR005704 Ribosomal protein S3, bacterial-type CJO35_00775 IPR015946 K homology domain-like, alpha/beta CJO35_00775 IPR004087 K Homology domain CJO35_00775 IPR009019 K homology domain superfamily, prokaryotic type CJO35_00775 IPR004044 K Homology domain, type 2 CJO35_00775 IPR018280 Ribosomal protein S3, conserved site CJO35_00780 IPR020798 Ribosomal protein L16, conserved site CJO35_00780 IPR036920 Ribosomal protein L10e/L16 superfamily CJO35_00780 IPR000114 Ribosomal protein L16 CJO35_00780 IPR016180 Ribosomal protein L10e/L16 CJO35_00785 IPR036049 Ribosomal protein L29/L35 superfamily CJO35_00785 IPR018254 Ribosomal protein L29, conserved site CJO35_00785 IPR001854 Ribosomal protein L29/L35 CJO35_00790 IPR019979 Ribosomal protein S17, conserved site CJO35_00790 IPR012340 Nucleic acid-binding, OB-fold CJO35_00790 IPR000266 Ribosomal protein S17/S11 CJO35_00790 IPR019984 30S ribosomal protein S17 CJO35_00795 IPR036853 Ribosomal protein L14 superfamily CJO35_00795 IPR000218 Ribosomal protein L14P CJO35_00795 IPR005745 Ribosomal protein L14P, bacterial-type CJO35_00795 IPR019972 Ribosomal protein L14P, conserved site CJO35_00800 IPR005824 KOW CJO35_00800 IPR041988 Ribosomal Protein L26/L24, KOW domain CJO35_00800 IPR014722 Ribosomal protein L2, domain 2 CJO35_00800 IPR005825 Ribosomal protein L24/L26, conserved site CJO35_00800 IPR008991 Translation protein SH3-like domain superfamily CJO35_00800 IPR003256 Ribosomal protein L24 CJO35_00805 IPR022803 Ribosomal protein L5 domain superfamily CJO35_00805 IPR031310 Ribosomal protein L5, N-terminal CJO35_00805 IPR020930 Ribosomal protein L5, bacterial-type CJO35_00805 IPR002132 Ribosomal protein L5 CJO35_00805 IPR020929 Ribosomal protein L5, conserved site CJO35_00805 IPR031309 Ribosomal protein L5, C-terminal CJO35_00810 IPR001209 Ribosomal protein S14 CJO35_00810 IPR018271 Ribosomal protein S14, conserved site CJO35_00810 IPR023053 Ribosomal protein S14, type Z CJO35_00815 IPR035987 Ribosomal protein S8 superfamily CJO35_00815 IPR000630 Ribosomal protein S8 CJO35_00820 IPR000702 Ribosomal protein L6 CJO35_00820 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CJO35_00820 IPR020040 Ribosomal protein L6, alpha-beta domain CJO35_00820 IPR002358 Ribosomal protein L6, conserved site CJO35_00820 IPR019906 Ribosomal protein L6, bacterial-type CJO35_00825 IPR004389 Ribosomal protein L18, bacterial-type CJO35_00825 IPR005484 Ribosomal protein L18 CJO35_00830 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_00830 IPR000851 Ribosomal protein S5 CJO35_00830 IPR005712 Ribosomal protein S5, bacterial-type CJO35_00830 IPR013810 Ribosomal protein S5, N-terminal CJO35_00830 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_00830 IPR005324 Ribosomal protein S5, C-terminal CJO35_00830 IPR018192 Ribosomal protein S5, N-terminal, conserved site CJO35_00835 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CJO35_00835 IPR005996 Ribosomal protein L30, bacterial-type CJO35_00835 IPR018038 Ribosomal protein L30, conserved site CJO35_00835 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CJO35_00840 IPR036227 Ribosomal L18e/L15P superfamily CJO35_00840 IPR021131 Ribosomal protein L18e/L15P CJO35_00840 IPR005749 Ribosomal protein L15, bacterial-type CJO35_00840 IPR030878 Ribosomal protein L15 CJO35_00840 IPR001196 Ribosomal protein L15, conserved site CJO35_00845 IPR023201 SecY domain superfamily CJO35_00845 IPR030659 SecY conserved site CJO35_00845 IPR002208 SecY/SEC61-alpha family CJO35_00845 IPR026593 Protein translocase subunit SecY CJO35_00850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00850 IPR007862 Adenylate kinase, active site lid domain CJO35_00850 IPR033690 Adenylate kinase, conserved site CJO35_00850 IPR006259 Adenylate kinase subfamily CJO35_00850 IPR000850 Adenylate kinase/UMP-CMP kinase CJO35_00855 IPR036005 Creatinase/aminopeptidase-like CJO35_00855 IPR001714 Peptidase M24, methionine aminopeptidase CJO35_00855 IPR000994 Peptidase M24 CJO35_00855 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CJO35_00865 IPR004368 Translation initiation factor IF-1 CJO35_00865 IPR022967 RNA-binding domain, S1 CJO35_00865 IPR006196 RNA-binding domain, S1, IF1 type CJO35_00865 IPR012340 Nucleic acid-binding, OB-fold CJO35_00870 IPR035977 Ribosomal protein L36 superfamily CJO35_00870 IPR000473 Ribosomal protein L36 CJO35_00875 IPR027437 30s ribosomal protein S13, C-terminal CJO35_00875 IPR001892 Ribosomal protein S13 CJO35_00875 IPR010979 Ribosomal protein S13-like, H2TH CJO35_00875 IPR019980 Ribosomal protein S13, bacterial-type CJO35_00875 IPR018269 Ribosomal protein S13, conserved site CJO35_00880 IPR018102 Ribosomal S11, conserved site CJO35_00880 IPR019981 Ribosomal protein S11, bacterial-type CJO35_00880 IPR001971 Ribosomal protein S11 CJO35_00880 IPR036967 Ribosomal protein S11 superfamily CJO35_00885 IPR011262 DNA-directed RNA polymerase, insert domain CJO35_00885 IPR011260 RNA polymerase, alpha subunit, C-terminal CJO35_00885 IPR036603 RNA polymerase, RBP11-like subunit CJO35_00885 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CJO35_00885 IPR011773 DNA-directed RNA polymerase, alpha subunit CJO35_00885 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CJO35_00890 IPR000456 Ribosomal protein L17 CJO35_00890 IPR036373 Ribosomal protein L17 superfamily CJO35_00895 IPR003439 ABC transporter-like CJO35_00895 IPR017871 ABC transporter, conserved site CJO35_00895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00895 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 CJO35_00895 IPR015856 ABC transporter, CbiO/EcfA subunit CJO35_00895 IPR003593 AAA+ ATPase domain CJO35_00900 IPR003593 AAA+ ATPase domain CJO35_00900 IPR003439 ABC transporter-like CJO35_00900 IPR017871 ABC transporter, conserved site CJO35_00900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00900 IPR015856 ABC transporter, CbiO/EcfA subunit CJO35_00900 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 CJO35_00905 IPR003339 ABC/ECF transporter, transmembrane component CJO35_00905 IPR024919 ECF transporter transmembrane protein EcfT CJO35_00910 IPR020095 Pseudouridine synthase I, TruA, C-terminal CJO35_00910 IPR020103 Pseudouridine synthase, catalytic domain superfamily CJO35_00910 IPR001406 Pseudouridine synthase I, TruA CJO35_00910 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CJO35_00915 IPR036899 Ribosomal protein L13 superfamily CJO35_00915 IPR023563 Ribosomal protein L13, conserved site CJO35_00915 IPR005823 Ribosomal protein L13, bacterial-type CJO35_00915 IPR005822 Ribosomal protein L13 CJO35_00920 IPR000754 Ribosomal protein S9 CJO35_00920 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_00920 IPR023035 Ribosomal protein S9, bacterial/plastid CJO35_00920 IPR020574 Ribosomal protein S9, conserved site CJO35_00920 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_00925 IPR007837 DNA damage-inducible protein DinB CJO35_00925 IPR034660 DinB/YfiT-like putative metalloenzymes CJO35_00935 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CJO35_00935 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD CJO35_00940 IPR019591 Mrp/NBP35 ATP-binding protein CJO35_00940 IPR000808 Mrp, conserved site CJO35_00940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_00940 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CJO35_00945 IPR041262 Spore germination GerD, central core domain CJO35_00950 IPR024164 KinB-signalling pathway activation protein CJO35_00955 IPR014132 Sporulation polysaccharide deacetylase, PdaB CJO35_00955 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_00955 IPR002509 NodB homology domain CJO35_00985 IPR001466 Beta-lactamase-related CJO35_00985 IPR012338 Beta-lactamase/transpeptidase-like CJO35_00995 IPR038770 Sodium/solute symporter superfamily CJO35_00995 IPR004710 Bile acid:sodium symporter CJO35_00995 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 CJO35_01000 IPR020204 Uncharacterised protein family, YxaJ CJO35_01010 IPR008302 Uncharacterised conserved protein UCP016719 CJO35_01015 IPR017853 Glycoside hydrolase superfamily CJO35_01015 IPR002772 Glycoside hydrolase family 3 C-terminal domain CJO35_01015 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CJO35_01015 IPR019800 Glycoside hydrolase, family 3, active site CJO35_01015 IPR001764 Glycoside hydrolase, family 3, N-terminal CJO35_01015 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CJO35_01020 IPR012338 Beta-lactamase/transpeptidase-like CJO35_01020 IPR001466 Beta-lactamase-related CJO35_01025 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_01025 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_01025 IPR003352 Phosphotransferase system, EIIC CJO35_01025 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_01025 IPR036878 Glucose permease domain IIB CJO35_01030 IPR001347 Sugar isomerase (SIS) CJO35_01030 IPR000281 Helix-turn-helix protein RpiR CJO35_01030 IPR035472 RpiR-like, SIS domain CJO35_01030 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01030 IPR009057 Homeobox-like domain superfamily CJO35_01035 IPR001347 Sugar isomerase (SIS) CJO35_01035 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein CJO35_01035 IPR005486 Glucokinase regulatory protein, conserved site CJO35_01035 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CJO35_01040 IPR007553 Domain of unknown function DUF523 CJO35_01070 IPR006035 Ureohydrolase CJO35_01070 IPR014033 Arginase CJO35_01070 IPR020855 Ureohydrolase, manganese-binding site CJO35_01070 IPR023696 Ureohydrolase domain superfamily CJO35_01075 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CJO35_01075 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01075 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_01075 IPR013325 RNA polymerase sigma factor, region 2 CJO35_01075 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_01075 IPR014294 RNA polymerase sigma-W, bacillaceae CJO35_01075 IPR039425 RNA polymerase sigma-70 like CJO35_01075 IPR014284 RNA polymerase sigma-70 like domain CJO35_01075 IPR007627 RNA polymerase sigma-70 region 2 CJO35_01080 IPR027383 Putative zinc-finger CJO35_01085 IPR034701 Diadenylate cyclase CdaA CJO35_01085 IPR014046 Diadenylate cyclase CJO35_01085 IPR003390 DNA integrity scanning protein, DisA, N-terminal CJO35_01085 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily CJO35_01090 IPR012505 YbbR-like CJO35_01095 IPR005841 Alpha-D-phosphohexomutase superfamily CJO35_01095 IPR016066 Alpha-D-phosphohexomutase, conserved site CJO35_01095 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CJO35_01095 IPR005843 Alpha-D-phosphohexomutase, C-terminal CJO35_01095 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CJO35_01095 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CJO35_01095 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CJO35_01095 IPR006352 Phosphoglucosamine mutase, bacterial type CJO35_01095 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CJO35_01100 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CJO35_01100 IPR035466 GlmS/AgaS, SIS domain 1 CJO35_01100 IPR017932 Glutamine amidotransferase type 2 domain CJO35_01100 IPR035490 GlmS/FrlB, SIS domain 2 CJO35_01100 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_01100 IPR001347 Sugar isomerase (SIS) CJO35_01115 IPR017871 ABC transporter, conserved site CJO35_01115 IPR003439 ABC transporter-like CJO35_01115 IPR003593 AAA+ ATPase domain CJO35_01115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_01120 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01120 IPR000524 Transcription regulator HTH, GntR CJO35_01120 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01125 IPR001845 HTH ArsR-type DNA-binding domain CJO35_01125 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01125 IPR011991 ArsR-like helix-turn-helix domain CJO35_01125 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01130 IPR011701 Major facilitator superfamily CJO35_01130 IPR020846 Major facilitator superfamily domain CJO35_01130 IPR036259 MFS transporter superfamily CJO35_01140 IPR039421 Type I protein exporter CJO35_01140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_01140 IPR003593 AAA+ ATPase domain CJO35_01140 IPR011527 ABC transporter type 1, transmembrane domain CJO35_01140 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_01140 IPR003439 ABC transporter-like CJO35_01140 IPR017871 ABC transporter, conserved site CJO35_01145 IPR036249 Thioredoxin-like superfamily CJO35_01145 IPR001853 DSBA-like thioredoxin domain CJO35_01160 IPR007530 Aminoglycoside 6-adenylyltransferase CJO35_01170 IPR036412 HAD-like superfamily CJO35_01170 IPR006439 HAD hydrolase, subfamily IA CJO35_01170 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB CJO35_01170 IPR041492 Haloacid dehalogenase-like hydrolase CJO35_01170 IPR023214 HAD superfamily CJO35_01170 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CJO35_01175 IPR004840 Amino acid permease, conserved site CJO35_01175 IPR004841 Amino acid permease/ SLC12A domain CJO35_01180 IPR014738 Citrate transporter CJO35_01180 IPR004680 Citrate transporter-like domain CJO35_01185 IPR042100 Bordetella uptake gene, domain 1 CJO35_01185 IPR005064 Bordetella uptake gene CJO35_01190 IPR024187 Signal transduction response regulator, citrate/malate metabolism CJO35_01190 IPR001789 Signal transduction response regulator, receiver domain CJO35_01190 IPR028141 Transcriptional regulator CJO35_01190 IPR013196 Helix-turn-helix, type 11 CJO35_01190 IPR011006 CheY-like superfamily CJO35_01195 IPR039506 SpoOB, alpha-helical domain CJO35_01195 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_01195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_01195 IPR029151 Periplasmic sensor-like domain superfamily CJO35_01195 IPR035965 PAS domain superfamily CJO35_01195 IPR005467 Histidine kinase domain CJO35_01195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_01195 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CJO35_01200 IPR005119 LysR, substrate-binding CJO35_01200 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01200 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01200 IPR000847 Transcription regulator HTH, LysR CJO35_01210 IPR005829 Sugar transporter, conserved site CJO35_01210 IPR020846 Major facilitator superfamily domain CJO35_01210 IPR011701 Major facilitator superfamily CJO35_01210 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_01210 IPR036259 MFS transporter superfamily CJO35_01215 IPR020255 Minor curli fiber component A CJO35_01220 IPR035314 Protein of unknown function DUF5370 CJO35_01230 IPR024705 Spermatogenesis-associated protein 20 CJO35_01230 IPR004879 Domain of unknown function DUF255 CJO35_01230 IPR008928 Six-hairpin glycosidase superfamily CJO35_01230 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_01230 IPR036249 Thioredoxin-like superfamily CJO35_01235 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_01235 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01255 IPR024301 Putative amidase domain CJO35_01275 IPR008928 Six-hairpin glycosidase superfamily CJO35_01275 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_01275 IPR004879 Domain of unknown function DUF255 CJO35_01275 IPR024705 Spermatogenesis-associated protein 20 CJO35_01275 IPR036249 Thioredoxin-like superfamily CJO35_01285 IPR011701 Major facilitator superfamily CJO35_01285 IPR036259 MFS transporter superfamily CJO35_01285 IPR020846 Major facilitator superfamily domain CJO35_01290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_01290 IPR010233 Ubiquinone biosynthesis O-methyltransferase CJO35_01305 IPR003841 Sodium-dependent phosphate transport protein CJO35_01305 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein CJO35_01310 IPR038972 Inner membrane protein YiaA-like CJO35_01310 IPR008024 YiaAB two helix CJO35_01335 IPR000620 EamA domain CJO35_01340 IPR009057 Homeobox-like domain superfamily CJO35_01340 IPR003313 AraC-type arabinose-binding/dimerisation domain CJO35_01340 IPR037923 Transcription regulator HTH-like CJO35_01340 IPR018060 DNA binding HTH domain, AraC-type CJO35_01340 IPR014710 RmlC-like jelly roll fold CJO35_01360 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CJO35_01360 IPR016205 Glycerol dehydrogenase CJO35_01360 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CJO35_01365 IPR003660 HAMP domain CJO35_01365 IPR004090 Chemotaxis methyl-accepting receptor CJO35_01365 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CJO35_01365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_01370 IPR025997 Periplasmic binding protein CJO35_01370 IPR028082 Periplasmic binding protein-like I CJO35_01370 IPR013456 D-xylose ABC transporter, substrate-binding protein CJO35_01385 IPR011217 Streptogramin lyase CJO35_01385 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CJO35_01390 IPR019649 Protein of unknown function DUF2512 CJO35_01395 IPR004841 Amino acid permease/ SLC12A domain CJO35_01395 IPR004840 Amino acid permease, conserved site CJO35_01400 IPR036589 Homocysteine-binding domain superfamily CJO35_01400 IPR003726 Homocysteine-binding domain CJO35_01400 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT CJO35_01405 IPR006879 Carbohydrate deacetylase YdjC-like CJO35_01405 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_01405 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria CJO35_01410 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_01410 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_01410 IPR003352 Phosphotransferase system, EIIC CJO35_01410 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CJO35_01410 IPR036878 Glucose permease domain IIB CJO35_01410 IPR011055 Duplicated hybrid motif CJO35_01410 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CJO35_01410 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_01415 IPR009061 Putative DNA-binding domain superfamily CJO35_01415 IPR012925 TipAS antibiotic-recognition domain CJO35_01415 IPR000551 MerR-type HTH domain CJO35_01415 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain CJO35_01420 IPR023090 UPF0702, alpha/beta domain superfamily CJO35_01420 IPR007353 Protein of unknown function DUF421 CJO35_01425 IPR023446 Carnitine operon protein CaiE CJO35_01425 IPR011004 Trimeric LpxA-like superfamily CJO35_01425 IPR001451 Hexapeptide repeat CJO35_01435 IPR021257 Protein of unknown function DUF2809 CJO35_01440 IPR001463 Sodium:alanine symporter CJO35_01445 IPR012338 Beta-lactamase/transpeptidase-like CJO35_01445 IPR015868 Glutaminase CJO35_01450 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_01450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_01450 IPR005467 Histidine kinase domain CJO35_01450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_01455 IPR011006 CheY-like superfamily CJO35_01455 IPR001789 Signal transduction response regulator, receiver domain CJO35_01455 IPR013972 YcbB domain CJO35_01460 IPR000182 GNAT domain CJO35_01460 IPR016181 Acyl-CoA N-acyltransferase CJO35_01465 IPR012338 Beta-lactamase/transpeptidase-like CJO35_01465 IPR001460 Penicillin-binding protein, transpeptidase CJO35_01465 IPR008756 Peptidase M56 CJO35_01470 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01470 IPR005650 BlaI transcriptional regulatory family CJO35_01470 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01475 IPR012338 Beta-lactamase/transpeptidase-like CJO35_01475 IPR000871 Beta-lactamase, class-A CJO35_01475 IPR023650 Beta-lactamase, class-A active site CJO35_01480 IPR008963 Purple acid phosphatase-like, N-terminal CJO35_01480 IPR032093 Phospholipase D, N-terminal CJO35_01480 IPR038607 PhoD-like superfamily CJO35_01480 IPR018946 Alkaline phosphatase D-related CJO35_01485 IPR003369 Sec-independent protein translocase protein TatA/B/E CJO35_01485 IPR006312 Sec-independent protein translocase protein TatA/E CJO35_01490 IPR002033 Sec-independent periplasmic protein translocase TatC CJO35_01490 IPR019820 Sec-independent periplasmic protein translocase, conserved site CJO35_01495 IPR002220 DapA-like CJO35_01495 IPR017655 5-dehydro-4-deoxyglucarate dehydratase CJO35_01495 IPR013785 Aldolase-type TIM barrel CJO35_01500 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_01500 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_01500 IPR016160 Aldehyde dehydrogenase, cysteine active site CJO35_01500 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_01500 IPR015590 Aldehyde dehydrogenase domain CJO35_01500 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CJO35_01505 IPR000849 Sugar phosphate transporter CJO35_01505 IPR036259 MFS transporter superfamily CJO35_01505 IPR020846 Major facilitator superfamily domain CJO35_01505 IPR011701 Major facilitator superfamily CJO35_01510 IPR036849 Enolase-like, C-terminal domain superfamily CJO35_01510 IPR029065 Enolase C-terminal domain-like CJO35_01510 IPR017653 Glucarate dehydratase CJO35_01510 IPR034598 D-Glucarate dehydratase-like CJO35_01510 IPR034593 Mandelate racemase-like CJO35_01510 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CJO35_01510 IPR029017 Enolase-like, N-terminal CJO35_01515 IPR011711 GntR, C-terminal CJO35_01515 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_01515 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01515 IPR000524 Transcription regulator HTH, GntR CJO35_01515 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01520 IPR013974 SAF domain CJO35_01520 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CJO35_01520 IPR017654 Galactarate dehydratase GarD-like CJO35_01525 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_01525 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_01525 IPR011006 CheY-like superfamily CJO35_01525 IPR039420 Transcriptional regulatory protein WalR-like CJO35_01525 IPR001789 Signal transduction response regulator, receiver domain CJO35_01525 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01530 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_01530 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_01530 IPR005467 Histidine kinase domain CJO35_01530 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_01530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_01530 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_01535 IPR003593 AAA+ ATPase domain CJO35_01535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_01535 IPR003439 ABC transporter-like CJO35_01535 IPR017871 ABC transporter, conserved site CJO35_01550 IPR025012 Domain of unknown function DUF3898 CJO35_01550 IPR025006 Protein of unknown function DUF3900 CJO35_01555 IPR032617 Protein of unknown function DUF4885 CJO35_01560 IPR002575 Aminoglycoside phosphotransferase CJO35_01560 IPR011009 Protein kinase-like domain superfamily CJO35_01565 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01565 IPR000835 MarR-type HTH domain CJO35_01565 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01570 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_01570 IPR020845 AMP-binding, conserved site CJO35_01570 IPR000873 AMP-dependent synthetase/ligase CJO35_01570 IPR042099 AMP-dependent synthetase-like superfamily CJO35_01590 IPR000551 MerR-type HTH domain CJO35_01590 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain CJO35_01590 IPR012925 TipAS antibiotic-recognition domain CJO35_01590 IPR009061 Putative DNA-binding domain superfamily CJO35_01600 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01600 IPR025714 Methyltransferase domain CJO35_01600 IPR005149 Transcription regulator PadR, N-terminal CJO35_01600 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_01600 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01600 IPR026669 Arsenite methyltransferase-like CJO35_01610 IPR031538 Tryptophan RNA-binding attenuator protein inhibitory protein CJO35_01610 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CJO35_01620 IPR010432 RDD CJO35_01625 IPR036915 Cyclin-like superfamily CJO35_01625 IPR007889 DNA binding HTH domain, Psq-type CJO35_01625 IPR004027 SEC-C motif CJO35_01630 IPR022501 Gallidermin ABC transporter, ATP-binding subunit CJO35_01630 IPR003593 AAA+ ATPase domain CJO35_01630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_01630 IPR003439 ABC transporter-like CJO35_01630 IPR017871 ABC transporter, conserved site CJO35_01645 IPR039420 Transcriptional regulatory protein WalR-like CJO35_01645 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01645 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_01645 IPR011006 CheY-like superfamily CJO35_01645 IPR001789 Signal transduction response regulator, receiver domain CJO35_01645 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_01650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_01650 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_01650 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_01650 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB CJO35_01650 IPR005467 Histidine kinase domain CJO35_01650 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_01655 IPR005119 LysR, substrate-binding CJO35_01655 IPR000847 Transcription regulator HTH, LysR CJO35_01655 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_01655 IPR036390 Winged helix DNA-binding domain superfamily CJO35_01660 IPR014347 Tautomerase/MIF superfamily CJO35_01660 IPR037479 Tautomerase, MSAD family CJO35_01675 IPR029051 Domain of unknown function DUF4352 CJO35_01675 IPR031343 Domain of unknown function DUF5105 CJO35_01675 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily CJO35_01680 IPR018385 C4-dicarboxylate anaerobic carrier-like CJO35_01685 IPR017439 Amidohydrolase CJO35_01685 IPR002933 Peptidase M20 CJO35_01685 IPR033845 p-Aminobenzoyl-glutamate hydrolase subunit A CJO35_01685 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_01685 IPR011650 Peptidase M20, dimerisation domain CJO35_01690 IPR016181 Acyl-CoA N-acyltransferase CJO35_01690 IPR000182 GNAT domain CJO35_01695 IPR023631 Amidase signature domain CJO35_01695 IPR000120 Amidase CJO35_01695 IPR020556 Amidase, conserved site CJO35_01695 IPR036928 Amidase signature (AS) superfamily CJO35_01700 IPR042088 Oligoendopeptidase F, C-terminal domain CJO35_01700 IPR001567 Peptidase M3A/M3B catalytic domain CJO35_01700 IPR004438 Peptidase M3B, oligoendopeptidase F CJO35_01700 IPR013647 Oligopeptidase F, N-terminal domain CJO35_01705 IPR007341 Transglycosylase-associated protein CJO35_01715 IPR009051 Alpha-helical ferredoxin CJO35_01715 IPR012257 Glycolate oxidase, iron-sulphur subunit CJO35_01715 IPR004017 Cysteine-rich domain CJO35_01715 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJO35_01715 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_01720 IPR004113 FAD-linked oxidase, C-terminal CJO35_01720 IPR004490 Glycolate oxidase subunit GlcD CJO35_01720 IPR016166 FAD-binding domain, PCMH-type CJO35_01720 IPR036318 FAD-binding, type PCMH-like superfamily CJO35_01720 IPR016164 FAD-linked oxidase-like, C-terminal CJO35_01720 IPR006094 FAD linked oxidase, N-terminal CJO35_01720 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CJO35_01725 IPR013012 Phosphotransferase system, EIIB component, type 3 CJO35_01725 IPR036095 PTS system IIB component-like superfamily CJO35_01725 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_01730 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CJO35_01730 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CJO35_01735 IPR003352 Phosphotransferase system, EIIC CJO35_01735 IPR004796 Phosphotransferase system, cellobiose-type IIC component CJO35_01735 IPR004501 Phosphotransferase system, EIIC component, type 3 CJO35_01740 IPR036291 NAD(P)-binding domain superfamily CJO35_01740 IPR001088 Glycoside hydrolase, family 4 CJO35_01740 IPR022616 Glycosyl hydrolase, family 4, C-terminal CJO35_01740 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CJO35_01740 IPR019802 Glycoside hydrolase, family 4, conserved site CJO35_01750 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_01750 IPR006879 Carbohydrate deacetylase YdjC-like CJO35_01750 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria CJO35_01755 IPR003610 Carbohydrate-binding module family 5/12 CJO35_01755 IPR036116 Fibronectin type III superfamily CJO35_01755 IPR036573 Carbohydrate-binding module superfamily 5/12 CJO35_01755 IPR001223 Glycoside hydrolase family 18, catalytic domain CJO35_01755 IPR001579 Glycoside hydrolase, chitinase active site CJO35_01755 IPR017853 Glycoside hydrolase superfamily CJO35_01755 IPR003961 Fibronectin type III CJO35_01755 IPR029070 Chitinase insertion domain superfamily CJO35_01755 IPR013783 Immunoglobulin-like fold CJO35_01755 IPR011583 Chitinase II CJO35_01760 IPR029070 Chitinase insertion domain superfamily CJO35_01760 IPR011583 Chitinase II CJO35_01760 IPR017853 Glycoside hydrolase superfamily CJO35_01760 IPR009470 Chitinase, C-terminal CJO35_01760 IPR013783 Immunoglobulin-like fold CJO35_01760 IPR036573 Carbohydrate-binding module superfamily 5/12 CJO35_01760 IPR001223 Glycoside hydrolase family 18, catalytic domain CJO35_01760 IPR003610 Carbohydrate-binding module family 5/12 CJO35_01765 IPR008256 Peptidase S1B CJO35_01765 IPR000126 Serine proteases, V8 family, serine active site CJO35_01765 IPR001254 Serine proteases, trypsin domain CJO35_01765 IPR009003 Peptidase S1, PA clan CJO35_01765 IPR028301 Serine proteases, V8 family, histidine active site CJO35_01770 IPR036291 NAD(P)-binding domain superfamily CJO35_01770 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_01770 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_01780 IPR032599 Protein of unknown function DUF4901 CJO35_01785 IPR036873 Rhodanese-like domain superfamily CJO35_01785 IPR001763 Rhodanese-like domain CJO35_01790 IPR011105 Cell wall hydrolase, SleB CJO35_01790 IPR042047 Cell wall hydrolase SleB, domain 1 CJO35_01795 IPR011251 Luciferase-like domain CJO35_01795 IPR036661 Luciferase-like domain superfamily CJO35_01795 IPR019949 Luciferase family oxidoreductase, group 1 CJO35_01800 IPR000064 Endopeptidase, NLPC/P60 domain CJO35_01800 IPR038765 Papain-like cysteine peptidase superfamily CJO35_01810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_01810 IPR025302 Domain of unknown function DUF4162 CJO35_01810 IPR017871 ABC transporter, conserved site CJO35_01810 IPR003439 ABC transporter-like CJO35_01810 IPR003593 AAA+ ATPase domain CJO35_01815 IPR009057 Homeobox-like domain superfamily CJO35_01815 IPR001647 DNA-binding HTH domain, TetR-type CJO35_01815 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_01815 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal CJO35_01835 IPR003325 TerD domain CJO35_01840 IPR003325 TerD domain CJO35_01845 IPR003325 TerD domain CJO35_01850 IPR005496 Integral membrane protein TerC CJO35_01850 IPR022493 Integral membrane YkoY CJO35_01865 IPR025647 Putative component of 'biosynthetic module' CJO35_01870 IPR008863 Toxic anion resistance CJO35_01875 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CJO35_01885 IPR009061 Putative DNA-binding domain superfamily CJO35_01885 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain CJO35_01885 IPR000551 MerR-type HTH domain CJO35_01890 IPR004737 Nitrate transporter CJO35_01890 IPR036259 MFS transporter superfamily CJO35_01890 IPR020846 Major facilitator superfamily domain CJO35_01890 IPR011701 Major facilitator superfamily CJO35_01895 IPR018177 L-lactate dehydrogenase, active site CJO35_01895 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CJO35_01895 IPR036291 NAD(P)-binding domain superfamily CJO35_01895 IPR001557 L-lactate/malate dehydrogenase CJO35_01895 IPR011304 L-lactate dehydrogenase CJO35_01895 IPR001236 Lactate/malate dehydrogenase, N-terminal CJO35_01895 IPR022383 Lactate/malate dehydrogenase, C-terminal CJO35_01900 IPR003804 L-lactate permease CJO35_01905 IPR001123 Amino acid exporter protein, LeuE-type CJO35_01910 IPR004841 Amino acid permease/ SLC12A domain CJO35_01915 IPR022926 NH(3)-dependent NAD(+) synthetase CJO35_01915 IPR003694 NAD(+) synthetase CJO35_01915 IPR022310 NAD/GMP synthase CJO35_01915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_01920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_01920 IPR031322 Shikimate kinase/gluconokinase CJO35_01920 IPR000623 Shikimate kinase/Threonine synthase-like 1 CJO35_01920 IPR023000 Shikimate kinase, conserved site CJO35_01925 IPR018775 RNA repair pathway DNA polymerase beta CJO35_01930 IPR002872 Proline dehydrogenase domain CJO35_01930 IPR008219 Proline dehydrogenase, bacteria and archaea CJO35_01930 IPR015659 Proline oxidase family CJO35_01930 IPR029041 FAD-linked oxidoreductase-like CJO35_01935 IPR016160 Aldehyde dehydrogenase, cysteine active site CJO35_01935 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_01935 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_01935 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CJO35_01935 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_01935 IPR015590 Aldehyde dehydrogenase domain CJO35_01935 IPR005932 1-pyrroline-5-carboxylate dehydrogenase CJO35_01940 IPR011851 Sodium/proline symporter CJO35_01940 IPR001734 Sodium/solute symporter CJO35_01940 IPR018212 Sodium/solute symporter, conserved site CJO35_01940 IPR038377 Sodium/glucose symporter superfamily CJO35_01945 IPR041522 CdaR, GGDEF-like domain CJO35_01945 IPR025736 PucR C-terminal helix-turn-helix domain CJO35_01945 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CJO35_01950 IPR015402 Protein of unknown function DUF1980 CJO35_01955 IPR005524 Predicted permease DUF318 CJO35_01960 IPR008391 Acetyl xylan esterase CJO35_01960 IPR029058 Alpha/Beta hydrolase fold CJO35_01960 IPR039069 Carbohydrate esterase 7 family CJO35_01980 IPR035906 MetI-like superfamily CJO35_01980 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_01980 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CJO35_01985 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJO35_01985 IPR018313 Solute-binding protein family 3, conserved site CJO35_01990 IPR003680 Flavodoxin-like fold CJO35_01990 IPR029039 Flavoprotein-like superfamily CJO35_02000 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CJO35_02000 IPR018120 Glycoside hydrolase family 1, active site CJO35_02000 IPR001360 Glycoside hydrolase family 1 CJO35_02000 IPR017853 Glycoside hydrolase superfamily CJO35_02005 IPR020354 Competence, DNA-entry nuclease inhibitor, ComJ CJO35_02005 IPR038691 DNA-entry nuclease inhibitor, ComJ superfamily CJO35_02010 IPR029476 Deoxyribonuclease NucA/NucB CJO35_02015 IPR017441 Protein kinase, ATP binding site CJO35_02015 IPR008271 Serine/threonine-protein kinase, active site CJO35_02015 IPR011009 Protein kinase-like domain superfamily CJO35_02015 IPR000719 Protein kinase domain CJO35_02015 IPR032710 NTF2-like domain superfamily CJO35_02025 IPR006829 LXG domain CJO35_02030 IPR008040 Hydantoinaseoxoprolinase, N-terminal CJO35_02030 IPR002821 Hydantoinase A/oxoprolinase CJO35_02035 IPR003692 Hydantoinase B/oxoprolinase CJO35_02040 IPR006061 Solute-binding family 1, conserved site CJO35_02040 IPR026045 Ferric binding protein CJO35_02045 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CJO35_02045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02045 IPR003593 AAA+ ATPase domain CJO35_02045 IPR013611 Transport-associated OB, type 2 CJO35_02045 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CJO35_02045 IPR003439 ABC transporter-like CJO35_02045 IPR017871 ABC transporter, conserved site CJO35_02045 IPR008995 Molybdate/tungstate binding, C-terminal CJO35_02050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_02050 IPR035906 MetI-like superfamily CJO35_02055 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_02055 IPR035906 MetI-like superfamily CJO35_02060 IPR010060 Non-ribosomal peptide synthase CJO35_02060 IPR001242 Condensation domain CJO35_02060 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_02060 IPR042099 AMP-dependent synthetase-like superfamily CJO35_02060 IPR010071 Amino acid adenylation domain CJO35_02060 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CJO35_02060 IPR020845 AMP-binding, conserved site CJO35_02060 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_02060 IPR036736 ACP-like superfamily CJO35_02060 IPR000873 AMP-dependent synthetase/ligase CJO35_02060 IPR009081 Phosphopantetheine binding ACP domain CJO35_02060 IPR006162 Phosphopantetheine attachment site CJO35_02060 IPR029058 Alpha/Beta hydrolase fold CJO35_02065 IPR042099 AMP-dependent synthetase-like superfamily CJO35_02065 IPR006162 Phosphopantetheine attachment site CJO35_02065 IPR010060 Non-ribosomal peptide synthase CJO35_02065 IPR001242 Condensation domain CJO35_02065 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_02065 IPR010071 Amino acid adenylation domain CJO35_02065 IPR009081 Phosphopantetheine binding ACP domain CJO35_02065 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CJO35_02065 IPR036736 ACP-like superfamily CJO35_02065 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_02065 IPR020845 AMP-binding, conserved site CJO35_02065 IPR000873 AMP-dependent synthetase/ligase CJO35_02070 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CJO35_02070 IPR001242 Condensation domain CJO35_02070 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_02070 IPR000873 AMP-dependent synthetase/ligase CJO35_02070 IPR001031 Thioesterase CJO35_02070 IPR020845 AMP-binding, conserved site CJO35_02070 IPR010071 Amino acid adenylation domain CJO35_02070 IPR006162 Phosphopantetheine attachment site CJO35_02070 IPR029058 Alpha/Beta hydrolase fold CJO35_02070 IPR009081 Phosphopantetheine binding ACP domain CJO35_02070 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_02070 IPR036736 ACP-like superfamily CJO35_02075 IPR001031 Thioesterase CJO35_02075 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS CJO35_02075 IPR029058 Alpha/Beta hydrolase fold CJO35_02080 IPR000620 EamA domain CJO35_02085 IPR004839 Aminotransferase, class I/classII CJO35_02085 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_02085 IPR000524 Transcription regulator HTH, GntR CJO35_02085 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02085 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_02090 IPR004568 Phosphopantetheine-protein transferase domain CJO35_02090 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CJO35_02090 IPR008278 4'-phosphopantetheinyl transferase domain CJO35_02095 IPR029058 Alpha/Beta hydrolase fold CJO35_02095 IPR000801 Putative esterase CJO35_02105 IPR038750 Uncharacterized protein YczE/YyaS-like CJO35_02115 IPR003439 ABC transporter-like CJO35_02115 IPR003593 AAA+ ATPase domain CJO35_02115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02115 IPR017871 ABC transporter, conserved site CJO35_02135 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_02135 IPR003660 HAMP domain CJO35_02135 IPR004090 Chemotaxis methyl-accepting receptor CJO35_02140 IPR003439 ABC transporter-like CJO35_02140 IPR017871 ABC transporter, conserved site CJO35_02140 IPR003593 AAA+ ATPase domain CJO35_02140 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CJO35_02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02145 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CJO35_02145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_02145 IPR035906 MetI-like superfamily CJO35_02150 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJO35_02150 IPR018313 Solute-binding protein family 3, conserved site CJO35_02155 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJO35_02155 IPR002078 RNA polymerase sigma factor 54 interaction domain CJO35_02155 IPR035965 PAS domain superfamily CJO35_02155 IPR000014 PAS domain CJO35_02155 IPR002197 DNA binding HTH domain, Fis-type CJO35_02155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02155 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJO35_02155 IPR025944 Sigma-54 interaction domain, conserved site CJO35_02155 IPR003593 AAA+ ATPase domain CJO35_02155 IPR009057 Homeobox-like domain superfamily CJO35_02160 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_02160 IPR005814 Aminotransferase class-III CJO35_02160 IPR010164 Ornithine aminotransferase CJO35_02160 IPR034757 Ornithine aminotransferase, bacterial type CJO35_02160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_02160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_02165 IPR004841 Amino acid permease/ SLC12A domain CJO35_02165 IPR004840 Amino acid permease, conserved site CJO35_02170 IPR006035 Ureohydrolase CJO35_02170 IPR020855 Ureohydrolase, manganese-binding site CJO35_02170 IPR014033 Arginase CJO35_02170 IPR023696 Ureohydrolase domain superfamily CJO35_02175 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02175 IPR000847 Transcription regulator HTH, LysR CJO35_02175 IPR005119 LysR, substrate-binding CJO35_02175 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02180 IPR032901 Probable UbiX-like flavin prenyltransferase CJO35_02180 IPR004507 Flavin prenyltransferase UbiX-like CJO35_02180 IPR003382 Flavoprotein CJO35_02180 IPR036551 Flavin prenyltransferase-like CJO35_02185 IPR032902 Phenolic acid decarboxylase subunit C CJO35_02185 IPR002830 UbiD decarboxylyase family CJO35_02195 IPR012349 FMN-binding split barrel CJO35_02235 IPR003615 HNH nuclease CJO35_02235 IPR027797 Pre-toxin TG domain CJO35_02235 IPR006829 LXG domain CJO35_02255 IPR003660 HAMP domain CJO35_02255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_02255 IPR005467 Histidine kinase domain CJO35_02255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_02255 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_02255 IPR010559 Signal transduction histidine kinase, internal region CJO35_02255 IPR033479 Double Cache domain 1 CJO35_02260 IPR001789 Signal transduction response regulator, receiver domain CJO35_02260 IPR011006 CheY-like superfamily CJO35_02260 IPR009057 Homeobox-like domain superfamily CJO35_02260 IPR018060 DNA binding HTH domain, AraC-type CJO35_02265 IPR028082 Periplasmic binding protein-like I CJO35_02265 IPR025997 Periplasmic binding protein CJO35_02270 IPR017871 ABC transporter, conserved site CJO35_02270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02270 IPR003593 AAA+ ATPase domain CJO35_02270 IPR003439 ABC transporter-like CJO35_02275 IPR001851 ABC transporter, permease CJO35_02280 IPR020846 Major facilitator superfamily domain CJO35_02280 IPR036259 MFS transporter superfamily CJO35_02280 IPR011701 Major facilitator superfamily CJO35_02285 IPR000835 MarR-type HTH domain CJO35_02285 IPR000182 GNAT domain CJO35_02285 IPR016181 Acyl-CoA N-acyltransferase CJO35_02285 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02285 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02290 IPR003476 Glycoside hydrolase, family 42 CJO35_02290 IPR013529 Glycoside hydrolase, family 42, N-terminal CJO35_02290 IPR013780 Glycosyl hydrolase, all-beta CJO35_02290 IPR017853 Glycoside hydrolase superfamily CJO35_02290 IPR013739 Beta-galactosidase C-terminal CJO35_02290 IPR029062 Class I glutamine amidotransferase-like CJO35_02290 IPR013738 Beta-galactosidase trimerisation CJO35_02300 IPR011042 Six-bladed beta-propeller, TolB-like CJO35_02300 IPR003431 Beta propeller phytase CJO35_02305 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CJO35_02305 IPR005279 Dipeptide/tripeptide permease CJO35_02305 IPR020846 Major facilitator superfamily domain CJO35_02305 IPR036259 MFS transporter superfamily CJO35_02305 IPR000109 Proton-dependent oligopeptide transporter family CJO35_02310 IPR012334 Pectin lyase fold CJO35_02310 IPR011050 Pectin lyase fold/virulence factor CJO35_02310 IPR024535 Pectate lyase superfamily protein CJO35_02310 IPR006626 Parallel beta-helix repeat CJO35_02310 IPR039448 Right handed beta helix domain CJO35_02310 IPR006633 Carbohydrate-binding/sugar hydrolysis domain CJO35_02320 IPR004995 Bacillus/Clostridium Ger spore germination protein CJO35_02325 IPR038501 Spore germination GerAC superfamily CJO35_02325 IPR008844 Spore germination GerAC CJO35_02330 IPR004761 Spore germination GerAB CJO35_02340 IPR003593 AAA+ ATPase domain CJO35_02340 IPR003439 ABC transporter-like CJO35_02340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02345 IPR025857 MacB-like periplasmic core domain CJO35_02345 IPR003838 ABC transporter permease protein domain CJO35_02350 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_02350 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02350 IPR039420 Transcriptional regulatory protein WalR-like CJO35_02350 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_02350 IPR001789 Signal transduction response regulator, receiver domain CJO35_02350 IPR011006 CheY-like superfamily CJO35_02355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_02355 IPR003660 HAMP domain CJO35_02355 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_02355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_02355 IPR005467 Histidine kinase domain CJO35_02355 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_02355 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_02360 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_02360 IPR003660 HAMP domain CJO35_02360 IPR033479 Double Cache domain 1 CJO35_02360 IPR029151 Periplasmic sensor-like domain superfamily CJO35_02360 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CJO35_02365 IPR027795 CASTOR, ACT domain CJO35_02365 IPR018042 Aspartate kinase, conserved site CJO35_02365 IPR001341 Aspartate kinase CJO35_02365 IPR005260 Aspartate kinase, monofunctional class CJO35_02365 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_02365 IPR035804 Aspartokinase 3, N-terminal CJO35_02365 IPR002912 ACT domain CJO35_02365 IPR036393 Acetylglutamate kinase-like superfamily CJO35_02370 IPR037294 ABC transporter, BtuC-like CJO35_02370 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_02375 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_02375 IPR037294 ABC transporter, BtuC-like CJO35_02380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02380 IPR003593 AAA+ ATPase domain CJO35_02380 IPR003439 ABC transporter-like CJO35_02380 IPR017871 ABC transporter, conserved site CJO35_02385 IPR002491 ABC transporter periplasmic binding domain CJO35_02385 IPR033870 FatB domain CJO35_02390 IPR004638 Drug resistance transporter EmrB-like CJO35_02390 IPR011701 Major facilitator superfamily CJO35_02390 IPR020846 Major facilitator superfamily domain CJO35_02390 IPR036259 MFS transporter superfamily CJO35_02395 IPR009057 Homeobox-like domain superfamily CJO35_02395 IPR001647 DNA-binding HTH domain, TetR-type CJO35_02400 IPR039556 ICL/PEPM domain CJO35_02400 IPR040442 Pyruvate kinase-like domain superfamily CJO35_02400 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CJO35_02405 IPR000415 Nitroreductase-like CJO35_02405 IPR016446 Flavin oxidoreductase Frp family CJO35_02405 IPR029479 Nitroreductase CJO35_02410 IPR007138 Antibiotic biosynthesis monooxygenase domain CJO35_02410 IPR011008 Dimeric alpha-beta barrel CJO35_02415 IPR011991 ArsR-like helix-turn-helix domain CJO35_02415 IPR001845 HTH ArsR-type DNA-binding domain CJO35_02415 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02415 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02420 IPR004839 Aminotransferase, class I/classII CJO35_02420 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_02420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_02420 IPR000524 Transcription regulator HTH, GntR CJO35_02420 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02420 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02425 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_02425 IPR004632 4-aminobutyrate aminotransferase, bacterial CJO35_02425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_02425 IPR005814 Aminotransferase class-III CJO35_02425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_02430 IPR002293 Amino acid/polyamine transporter I CJO35_02435 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_02435 IPR010102 Succinate semialdehyde dehydrogenase CJO35_02435 IPR016160 Aldehyde dehydrogenase, cysteine active site CJO35_02435 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CJO35_02435 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_02435 IPR015590 Aldehyde dehydrogenase domain CJO35_02435 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_02440 IPR004779 Carboxylate/Amino Acid/Amine Transporter CJO35_02440 IPR000620 EamA domain CJO35_02450 IPR012533 YcnI-like CJO35_02450 IPR038507 YcnI-like superfamily CJO35_02455 IPR032693 YtkA-like domain CJO35_02455 IPR032694 Copper transport protein C/D CJO35_02455 IPR007348 CopC domain CJO35_02455 IPR008457 Copper resistance protein D CJO35_02455 IPR014756 Immunoglobulin E-set CJO35_02460 IPR008719 Nitrous oxide reductase accessory protein NosL CJO35_02460 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02460 IPR001034 DeoR-type HTH domain CJO35_02460 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02465 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_02465 IPR023753 FAD/NAD(P)-binding domain CJO35_02465 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CJO35_02465 IPR007419 BFD-like [2Fe-2S]-binding domain CJO35_02465 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CJO35_02465 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CJO35_02465 IPR017121 Nitrite reductase [NAD(P)H], large subunit CJO35_02465 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CJO35_02465 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CJO35_02465 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CJO35_02470 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CJO35_02470 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CJO35_02470 IPR006656 Molybdopterin oxidoreductase CJO35_02470 IPR009010 Aspartate decarboxylase-like domain superfamily CJO35_02470 IPR006657 Molybdopterin dinucleotide-binding domain CJO35_02470 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CJO35_02475 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CJO35_02475 IPR023753 FAD/NAD(P)-binding domain CJO35_02475 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CJO35_02475 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CJO35_02475 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_02475 IPR007419 BFD-like [2Fe-2S]-binding domain CJO35_02475 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CJO35_02475 IPR017121 Nitrite reductase [NAD(P)H], large subunit CJO35_02475 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CJO35_02475 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CJO35_02475 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CJO35_02475 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CJO35_02480 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CJO35_02480 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CJO35_02480 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type CJO35_02485 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CJO35_02485 IPR000878 Tetrapyrrole methylase CJO35_02485 IPR014777 Tetrapyrrole methylase, subdomain 1 CJO35_02485 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CJO35_02485 IPR014776 Tetrapyrrole methylase, subdomain 2 CJO35_02485 IPR035996 Tetrapyrrole methylase superfamily CJO35_02485 IPR006366 Uroporphyrin-III C-methyltransferase CJO35_02490 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02490 IPR000524 Transcription regulator HTH, GntR CJO35_02490 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_02490 IPR011711 GntR, C-terminal CJO35_02490 IPR000485 AsnC-type HTH domain CJO35_02490 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02495 IPR001898 Solute carrier family 13 CJO35_02500 IPR029069 HotDog domain superfamily CJO35_02500 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CJO35_02505 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CJO35_02505 IPR029069 HotDog domain superfamily CJO35_02510 IPR023370 TrmO-like, N-terminal domain CJO35_02510 IPR036414 YaeB, N-terminal domain superfamily CJO35_02510 IPR023368 Uncharacterised protein family UPF0066, conserved site CJO35_02510 IPR036413 YaeB-like superfamily CJO35_02510 IPR040372 YaeB-like CJO35_02520 IPR002178 PTS EIIA type-2 domain CJO35_02520 IPR016152 Phosphotransferase/anion transporter CJO35_02535 IPR029061 Thiamin diphosphate-binding fold CJO35_02535 IPR005474 Transketolase, N-terminal CJO35_02540 IPR029061 Thiamin diphosphate-binding fold CJO35_02540 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CJO35_02540 IPR033248 Transketolase, C-terminal domain CJO35_02540 IPR005475 Transketolase-like, pyrimidine-binding domain CJO35_02545 IPR023214 HAD superfamily CJO35_02545 IPR036412 HAD-like superfamily CJO35_02545 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_02550 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_02550 IPR005501 LamB/YcsF/PxpA-like CJO35_02555 IPR001046 NRAMP family CJO35_02560 IPR016938 Uncharacterised protein family UPF0317 CJO35_02560 IPR038021 Putative hydro-lyase CJO35_02560 IPR009906 D-glutamate cyclase CJO35_02565 IPR010016 KipI family CJO35_02565 IPR029000 Cyclophilin-like domain superfamily CJO35_02565 IPR003833 Carboxyltransferase domain, subdomain C and D CJO35_02570 IPR003778 Carboxyltransferase domain, subdomain A and B CJO35_02570 IPR029000 Cyclophilin-like domain superfamily CJO35_02575 IPR029016 GAF-like domain superfamily CJO35_02575 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02575 IPR014757 Transcription regulator IclR, C-terminal CJO35_02575 IPR005471 Transcription regulator IclR, N-terminal CJO35_02575 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02580 IPR036514 SGNH hydrolase superfamily CJO35_02580 IPR013830 SGNH hydrolase-type esterase domain CJO35_02585 IPR003352 Phosphotransferase system, EIIC CJO35_02585 IPR013014 Phosphotransferase system, EIIC component, type 2 CJO35_02585 IPR029503 Phosphotransferase system EIIB component, mannitol-specific CJO35_02585 IPR036095 PTS system IIB component-like superfamily CJO35_02585 IPR013011 Phosphotransferase system, EIIB component, type 2 CJO35_02585 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_02585 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC CJO35_02590 IPR002178 PTS EIIA type-2 domain CJO35_02590 IPR016152 Phosphotransferase/anion transporter CJO35_02595 IPR000669 Mannitol dehydrogenase CJO35_02595 IPR023028 Mannitol-1-phosphate 5-dehydrogenase CJO35_02595 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_02595 IPR023027 Mannitol dehydrogenase, conserved site CJO35_02595 IPR013131 Mannitol dehydrogenase, N-terminal CJO35_02595 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_02595 IPR036291 NAD(P)-binding domain superfamily CJO35_02595 IPR013118 Mannitol dehydrogenase, C-terminal CJO35_02600 IPR011608 PRD domain CJO35_02600 IPR036634 PRD domain superfamily CJO35_02600 IPR016152 Phosphotransferase/anion transporter CJO35_02600 IPR002178 PTS EIIA type-2 domain CJO35_02600 IPR013011 Phosphotransferase system, EIIB component, type 2 CJO35_02600 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_02600 IPR007737 Mga helix-turn-helix domain CJO35_02600 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02600 IPR036095 PTS system IIB component-like superfamily CJO35_02600 IPR013196 Helix-turn-helix, type 11 CJO35_02600 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02605 IPR036291 NAD(P)-binding domain superfamily CJO35_02605 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_02605 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_02610 IPR014710 RmlC-like jelly roll fold CJO35_02610 IPR011051 RmlC-like cupin domain superfamily CJO35_02620 IPR038725 General stress protein, FMN-binding split barrel domain CJO35_02620 IPR012349 FMN-binding split barrel CJO35_02625 IPR021260 Lipid II flippase Amj CJO35_02630 IPR004474 Cell envelope-related transcriptional attenuator domain CJO35_02635 IPR023845 Domain of unknown function DUF3817, transmembrane CJO35_02645 IPR000485 AsnC-type HTH domain CJO35_02645 IPR011008 Dimeric alpha-beta barrel CJO35_02645 IPR019888 Transcription regulator AsnC-type CJO35_02645 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJO35_02645 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02645 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02650 IPR000380 DNA topoisomerase, type IA CJO35_02650 IPR013497 DNA topoisomerase, type IA, central CJO35_02650 IPR023406 DNA topoisomerase, type IA, active site CJO35_02650 IPR003601 DNA topoisomerase, type IA, domain 2 CJO35_02650 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CJO35_02650 IPR006171 TOPRIM domain CJO35_02650 IPR005738 DNA topoisomerase III CJO35_02650 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CJO35_02650 IPR023405 DNA topoisomerase, type IA, core domain CJO35_02650 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CJO35_02650 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CJO35_02650 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CJO35_02655 IPR002293 Amino acid/polyamine transporter I CJO35_02660 IPR029061 Thiamin diphosphate-binding fold CJO35_02660 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CJO35_02660 IPR012000 Thiamine pyrophosphate enzyme, central domain CJO35_02660 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CJO35_02660 IPR029035 DHS-like NAD/FAD-binding domain superfamily CJO35_02660 IPR000399 TPP-binding enzyme, conserved site CJO35_02675 IPR000182 GNAT domain CJO35_02675 IPR016181 Acyl-CoA N-acyltransferase CJO35_02680 IPR001046 NRAMP family CJO35_02685 IPR007341 Transglycosylase-associated protein CJO35_02690 IPR004708 Aspartate ammonia-lyase CJO35_02690 IPR024083 Fumarase/histidase, N-terminal CJO35_02690 IPR018951 Fumarase C, C-terminal CJO35_02690 IPR020557 Fumarate lyase, conserved site CJO35_02690 IPR008948 L-Aspartase-like CJO35_02690 IPR000362 Fumarate lyase family CJO35_02690 IPR022761 Fumarate lyase, N-terminal CJO35_02695 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase CJO35_02695 IPR006326 UDP-glycosyltransferase, MGT CJO35_02700 IPR018691 Protein of unknown function DUF2188 CJO35_02705 IPR024787 EcsC protein CJO35_02715 IPR011051 RmlC-like cupin domain superfamily CJO35_02715 IPR014710 RmlC-like jelly roll fold CJO35_02715 IPR013096 Cupin 2, conserved barrel CJO35_02715 IPR019780 Germin, manganese binding site CJO35_02720 IPR019626 Stress-induced protein, KGG, repeat CJO35_02720 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup CJO35_02725 IPR002549 Transmembrane protein TqsA-like CJO35_02730 IPR001991 Sodium:dicarboxylate symporter CJO35_02730 IPR036458 Sodium:dicarboxylate symporter superfamily CJO35_02730 IPR034703 Proton/glutamate-aspartate symporter GltP CJO35_02730 IPR033380 Glutamate-aspartate symport protein GltP/GltT CJO35_02730 IPR018107 Sodium:dicarboxylate symporter, conserved site CJO35_02735 IPR017871 ABC transporter, conserved site CJO35_02735 IPR003593 AAA+ ATPase domain CJO35_02735 IPR003439 ABC transporter-like CJO35_02735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02750 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CJO35_02750 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CJO35_02750 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CJO35_02750 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CJO35_02750 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CJO35_02750 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CJO35_02755 IPR025004 Transcriptional regulatory protein SenN/SenS CJO35_02765 IPR005746 Thioredoxin CJO35_02765 IPR036249 Thioredoxin-like superfamily CJO35_02765 IPR013766 Thioredoxin domain CJO35_02770 IPR013815 ATP-grasp fold, subdomain 1 CJO35_02770 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CJO35_02770 IPR005905 D-alanine--D-alanine ligase CJO35_02770 IPR011095 D-alanine--D-alanine ligase, C-terminal CJO35_02770 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CJO35_02770 IPR016185 Pre-ATP-grasp domain superfamily CJO35_02770 IPR011761 ATP-grasp fold CJO35_02775 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CJO35_02775 IPR036615 Mur ligase, C-terminal domain superfamily CJO35_02775 IPR013221 Mur ligase, central CJO35_02775 IPR000713 Mur ligase, N-terminal catalytic domain CJO35_02775 IPR035911 MurE/MurF, N-terminal CJO35_02775 IPR036565 Mur-like, catalytic domain superfamily CJO35_02775 IPR004101 Mur ligase, C-terminal CJO35_02780 IPR029058 Alpha/Beta hydrolase fold CJO35_02780 IPR022742 Serine aminopeptidase, S33 CJO35_02780 IPR012354 Esterase/lipase CJO35_02785 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_02785 IPR001650 Helicase, C-terminal CJO35_02785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_02785 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CJO35_02785 IPR030880 DEAD-box ATP-dependent RNA helicase CshA CJO35_02785 IPR011545 DEAD/DEAH box helicase domain CJO35_02785 IPR014014 RNA helicase, DEAD-box type, Q motif CJO35_02790 IPR005182 Domain of unknown function DUF304 CJO35_02795 IPR014529 Uncharacterised conserved protein UCP026631 CJO35_02795 IPR005182 Domain of unknown function DUF304 CJO35_02800 IPR035952 Rhomboid-like superfamily CJO35_02800 IPR022764 Peptidase S54, rhomboid domain CJO35_02805 IPR029046 Lipoprotein localisation LolA/LolB/LppX CJO35_02810 IPR029066 PLP-binding barrel CJO35_02810 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CJO35_02810 IPR001608 Alanine racemase, N-terminal CJO35_02810 IPR011079 Alanine racemase, C-terminal CJO35_02810 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CJO35_02810 IPR000821 Alanine racemase CJO35_02815 IPR002145 Ribbon-helix-helix protein, CopG CJO35_02815 IPR010985 Ribbon-helix-helix CJO35_02815 IPR013321 Arc-type ribbon-helix-helix CJO35_02820 IPR003477 mRNA interferase PemK-like CJO35_02820 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CJO35_02825 IPR012292 Globin/Protoglobin CJO35_02825 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain CJO35_02825 IPR002645 STAS domain CJO35_02825 IPR036513 STAS domain superfamily CJO35_02830 IPR002645 STAS domain CJO35_02830 IPR036513 STAS domain superfamily CJO35_02835 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_02835 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_02840 IPR001932 PPM-type phosphatase domain CJO35_02840 IPR036457 PPM-type phosphatase domain superfamily CJO35_02840 IPR017944 KaiA/RbsU helical domain superfamily CJO35_02840 IPR014787 Phosphoserine phosphatase RsbU, N-terminal CJO35_02845 IPR036513 STAS domain superfamily CJO35_02845 IPR002645 STAS domain CJO35_02845 IPR003658 Anti-sigma factor antagonist CJO35_02850 IPR010193 Serine-protein kinase RsbW CJO35_02850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_02850 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_02855 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02855 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_02855 IPR007627 RNA polymerase sigma-70 region 2 CJO35_02855 IPR013325 RNA polymerase sigma factor, region 2 CJO35_02855 IPR007630 RNA polymerase sigma-70 region 4 CJO35_02855 IPR007624 RNA polymerase sigma-70 region 3 CJO35_02855 IPR000943 RNA polymerase sigma-70 CJO35_02855 IPR014284 RNA polymerase sigma-70 like domain CJO35_02855 IPR014288 RNA polymerase sigma-B factor CJO35_02855 IPR014322 RNA polymerase sigma-B/F/G type CJO35_02860 IPR001932 PPM-type phosphatase domain CJO35_02860 IPR039248 Phosphatase RsbX CJO35_02860 IPR036457 PPM-type phosphatase domain superfamily CJO35_02865 IPR018974 Tex-like protein, N-terminal CJO35_02865 IPR032639 Tex protein, YqgF-like domain CJO35_02865 IPR012340 Nucleic acid-binding, OB-fold CJO35_02865 IPR023319 Tex-like protein, HTH domain superfamily CJO35_02865 IPR023323 Tex-like domain superfamily CJO35_02865 IPR006641 YqgF/RNase H-like domain CJO35_02865 IPR003029 S1 domain CJO35_02865 IPR022967 RNA-binding domain, S1 CJO35_02865 IPR012337 Ribonuclease H-like superfamily CJO35_02865 IPR041692 HHH domain 9 CJO35_02865 IPR010994 RuvA domain 2-like CJO35_02865 IPR037027 YqgF/RNase H-like domain superfamily CJO35_02870 IPR001647 DNA-binding HTH domain, TetR-type CJO35_02870 IPR009057 Homeobox-like domain superfamily CJO35_02875 IPR004869 Membrane transport protein MMPL domain CJO35_02875 IPR000731 Sterol-sensing domain CJO35_02885 IPR023524 Uncharacterised protein family SprT-like CJO35_02885 IPR006640 SprT-like CJO35_02935 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_02935 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_02940 IPR005804 Fatty acid desaturase domain CJO35_02945 IPR012156 Cold shock, CspA CJO35_02945 IPR012340 Nucleic acid-binding, OB-fold CJO35_02945 IPR011129 Cold shock domain CJO35_02945 IPR002059 Cold-shock protein, DNA-binding CJO35_02945 IPR019844 Cold-shock (CSD) domain CJO35_02950 IPR036291 NAD(P)-binding domain superfamily CJO35_02950 IPR004627 L-threonine 3-dehydrogenase CJO35_02950 IPR013149 Alcohol dehydrogenase, C-terminal CJO35_02950 IPR020843 Polyketide synthase, enoylreductase domain CJO35_02950 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CJO35_02950 IPR013154 Alcohol dehydrogenase, N-terminal CJO35_02950 IPR011032 GroES-like superfamily CJO35_02960 IPR038750 Uncharacterized protein YczE/YyaS-like CJO35_02965 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02965 IPR000835 MarR-type HTH domain CJO35_02965 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_02965 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02970 IPR000182 GNAT domain CJO35_02970 IPR016181 Acyl-CoA N-acyltransferase CJO35_02975 IPR007396 Transcriptional regulator PAI 2-type CJO35_02975 IPR012349 FMN-binding split barrel CJO35_02985 IPR036390 Winged helix DNA-binding domain superfamily CJO35_02985 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_02985 IPR002577 Helix-turn-helix, HxlR type CJO35_02985 IPR011991 ArsR-like helix-turn-helix domain CJO35_02990 IPR003740 Uncharacterised membrane protein YitT CJO35_02990 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_02990 IPR019264 Domain of unknown function DUF2179 CJO35_03000 IPR036390 Winged helix DNA-binding domain superfamily CJO35_03000 IPR005119 LysR, substrate-binding CJO35_03000 IPR000847 Transcription regulator HTH, LysR CJO35_03000 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_03015 IPR037175 Kynurenine formamidase superfamily CJO35_03015 IPR007325 Kynurenine formamidase/cyclase-like CJO35_03015 IPR017484 Kynurenine formamidase, bacteria CJO35_03020 IPR004841 Amino acid permease/ SLC12A domain CJO35_03020 IPR004840 Amino acid permease, conserved site CJO35_03035 IPR013325 RNA polymerase sigma factor, region 2 CJO35_03035 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CJO35_03035 IPR007627 RNA polymerase sigma-70 region 2 CJO35_03035 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_03035 IPR039425 RNA polymerase sigma-70 like CJO35_03035 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_03035 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_03035 IPR014284 RNA polymerase sigma-70 like domain CJO35_03040 IPR021729 Domain of unknown function DUF3298 CJO35_03040 IPR025303 Deacetylase PdaC CJO35_03040 IPR037126 PdaC/RsiV-like superfamily CJO35_03045 IPR036514 SGNH hydrolase superfamily CJO35_03045 IPR002656 Acyltransferase 3 CJO35_03050 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CJO35_03050 IPR020846 Major facilitator superfamily domain CJO35_03050 IPR036259 MFS transporter superfamily CJO35_03050 IPR011701 Major facilitator superfamily CJO35_03055 IPR011006 CheY-like superfamily CJO35_03055 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_03055 IPR001789 Signal transduction response regulator, receiver domain CJO35_03055 IPR010559 Signal transduction histidine kinase, internal region CJO35_03055 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_03060 IPR007492 LytTR DNA-binding domain CJO35_03060 IPR001789 Signal transduction response regulator, receiver domain CJO35_03060 IPR011006 CheY-like superfamily CJO35_03065 IPR011266 Fibrinogen-binding domain 2 CJO35_03065 IPR008966 Adhesion domain superfamily CJO35_03065 IPR011252 Fibrogen-binding domain 1 CJO35_03065 IPR019948 Gram-positive LPXTG cell wall anchor CJO35_03065 IPR013783 Immunoglobulin-like fold CJO35_03065 IPR041171 SDR-like Ig domain CJO35_03065 IPR033764 SD-repeat containing protein, B domain CJO35_03065 IPR005877 YSIRK Gram-positive signal peptide CJO35_03065 IPR019931 LPXTG cell wall anchor domain CJO35_03070 IPR023365 Sortase domain superfamily CJO35_03070 IPR005754 Sortase family CJO35_03070 IPR042007 Sortase A CJO35_03075 IPR005829 Sugar transporter, conserved site CJO35_03075 IPR005828 Major facilitator, sugar transporter-like CJO35_03075 IPR020846 Major facilitator superfamily domain CJO35_03075 IPR036259 MFS transporter superfamily CJO35_03075 IPR003663 Sugar/inositol transporter CJO35_03115 IPR016188 PurM-like, N-terminal domain CJO35_03115 IPR006283 Thiamine-monophosphate kinase CJO35_03115 IPR010918 PurM-like, C-terminal domain CJO35_03115 IPR036921 PurM-like, N-terminal domain superfamily CJO35_03115 IPR036676 PurM-like, C-terminal domain superfamily CJO35_03120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03120 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CJO35_03125 IPR000905 Gcp-like domain CJO35_03125 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CJO35_03130 IPR006464 N-acetyltransferase RimI/Ard1 CJO35_03130 IPR000182 GNAT domain CJO35_03130 IPR016181 Acyl-CoA N-acyltransferase CJO35_03135 IPR000905 Gcp-like domain CJO35_03135 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CJO35_03135 IPR017861 Kae1/TsaD family CJO35_03140 IPR017871 ABC transporter, conserved site CJO35_03140 IPR003439 ABC transporter-like CJO35_03140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03140 IPR032781 ABC-transporter extension domain CJO35_03140 IPR032524 ABC transporter Uup, C-terminal CJO35_03140 IPR003593 AAA+ ATPase domain CJO35_03140 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CJO35_03145 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CJO35_03145 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CJO35_03145 IPR023045 Molybdenum cofactor biosynthesis C CJO35_03150 IPR036291 NAD(P)-binding domain superfamily CJO35_03150 IPR036390 Winged helix DNA-binding domain superfamily CJO35_03150 IPR022876 Redox-sensing transcriptional repressor Rex CJO35_03150 IPR009718 Rex DNA-binding, C-terminal domain CJO35_03150 IPR003781 CoA-binding CJO35_03150 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_03155 IPR003369 Sec-independent protein translocase protein TatA/B/E CJO35_03155 IPR006312 Sec-independent protein translocase protein TatA/E CJO35_03160 IPR019820 Sec-independent periplasmic protein translocase, conserved site CJO35_03160 IPR002033 Sec-independent periplasmic protein translocase TatC CJO35_03165 IPR025426 Protein of unknown function DUF4305 CJO35_03170 IPR003675 CAAX prenyl protease 2 CJO35_03175 IPR020818 GroES chaperonin family CJO35_03175 IPR037124 GroES chaperonin superfamily CJO35_03175 IPR018369 Chaperonin GroES, conserved site CJO35_03175 IPR011032 GroES-like superfamily CJO35_03180 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CJO35_03180 IPR027413 GroEL-like equatorial domain superfamily CJO35_03180 IPR027409 GroEL-like apical domain superfamily CJO35_03180 IPR018370 Chaperonin Cpn60, conserved site CJO35_03180 IPR001844 Chaperonin Cpn60 CJO35_03180 IPR002423 Chaperonin Cpn60/TCP-1 family CJO35_03205 IPR014962 YolD-like protein CJO35_03215 IPR007391 Vancomycin resistance VanW CJO35_03220 IPR019723 Uncharacterised protein, YfmQ CJO35_03230 IPR003738 SOS response associated peptidase (SRAP) CJO35_03230 IPR036590 SOS response associated peptidase-like CJO35_03240 IPR041484 TetR transcriptional regulator Rv1219c-like, C-terminal domain CJO35_03240 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_03240 IPR001647 DNA-binding HTH domain, TetR-type CJO35_03240 IPR009057 Homeobox-like domain superfamily CJO35_03245 IPR008279 PEP-utilising enzyme, mobile domain CJO35_03245 IPR013815 ATP-grasp fold, subdomain 1 CJO35_03245 IPR036637 Phosphohistidine domain superfamily CJO35_03245 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CJO35_03255 IPR007438 Protein of unknown function DUF488 CJO35_03260 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_03260 IPR036291 NAD(P)-binding domain superfamily CJO35_03260 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_03265 IPR029058 Alpha/Beta hydrolase fold CJO35_03265 IPR002018 Carboxylesterase, type B CJO35_03265 IPR019826 Carboxylesterase type B, active site CJO35_03265 IPR019819 Carboxylesterase type B, conserved site CJO35_03265 IPR000997 Cholinesterase CJO35_03270 IPR036259 MFS transporter superfamily CJO35_03270 IPR005829 Sugar transporter, conserved site CJO35_03270 IPR011701 Major facilitator superfamily CJO35_03270 IPR020846 Major facilitator superfamily domain CJO35_03275 IPR007157 PspA/IM30 CJO35_03280 IPR013137 Zinc finger, TFIIB-type CJO35_03285 IPR007621 TPM domain CJO35_03290 IPR036013 Band 7/SPFH domain superfamily CJO35_03290 IPR033880 SPFH domain, YdjI-like CJO35_03300 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_03300 IPR002831 Transcription regulator TrmB, N-terminal CJO35_03300 IPR021586 Transcription regulator TrmB, C-terminal CJO35_03300 IPR036390 Winged helix DNA-binding domain superfamily CJO35_03305 IPR001123 Amino acid exporter protein, LeuE-type CJO35_03305 IPR004778 Homoserine/Threonine efflux protein CJO35_03310 IPR010652 Domain of unknown function DUF1232 CJO35_03315 IPR013438 Sporulation stage V, protein E CJO35_03315 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CJO35_03315 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CJO35_03315 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CJO35_03320 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CJO35_03320 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CJO35_03345 IPR025303 Deacetylase PdaC CJO35_03345 IPR002509 NodB homology domain CJO35_03345 IPR037126 PdaC/RsiV-like superfamily CJO35_03345 IPR021729 Domain of unknown function DUF3298 CJO35_03345 IPR017219 Peptidoglycan GlcNAc deacetylase CJO35_03345 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_03350 IPR013776 Alpha-amylase, thermostable CJO35_03350 IPR013780 Glycosyl hydrolase, all-beta CJO35_03350 IPR017853 Glycoside hydrolase superfamily CJO35_03350 IPR015237 Alpha-amylase C-terminal, prokaryotic CJO35_03350 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CJO35_03355 IPR028082 Periplasmic binding protein-like I CJO35_03355 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_03355 IPR000843 LacI-type HTH domain CJO35_03360 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain CJO35_03360 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CJO35_03360 IPR013783 Immunoglobulin-like fold CJO35_03360 IPR017853 Glycoside hydrolase superfamily CJO35_03365 IPR006059 Bacterial extracellular solute-binding protein CJO35_03365 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein CJO35_03370 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_03370 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like CJO35_03370 IPR035906 MetI-like superfamily CJO35_03375 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_03375 IPR035906 MetI-like superfamily CJO35_03380 IPR009574 Protein of unknown function DUF1189 CJO35_03385 IPR011013 Galactose mutarotase-like domain superfamily CJO35_03385 IPR005194 Glycoside hydrolase family 65, C-terminal CJO35_03385 IPR005195 Glycoside hydrolase, family 65, central catalytic CJO35_03385 IPR005196 Glycoside hydrolase, family 65, N-terminal CJO35_03385 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_03385 IPR008928 Six-hairpin glycosidase superfamily CJO35_03385 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily CJO35_03385 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase CJO35_03390 IPR013780 Glycosyl hydrolase, all-beta CJO35_03390 IPR017853 Glycoside hydrolase superfamily CJO35_03390 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CJO35_03390 IPR032091 Maltogenic Amylase, C-terminal CJO35_03395 IPR036412 HAD-like superfamily CJO35_03395 IPR041492 Haloacid dehalogenase-like hydrolase CJO35_03395 IPR023214 HAD superfamily CJO35_03395 IPR010972 Beta-phosphoglucomutase CJO35_03395 IPR010976 Beta-phosphoglucomutase hydrolase CJO35_03395 IPR006439 HAD hydrolase, subfamily IA CJO35_03395 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CJO35_03400 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CJO35_03400 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_03400 IPR002942 RNA-binding S4 domain CJO35_03400 IPR002305 Aminoacyl-tRNA synthetase, class Ic CJO35_03400 IPR002307 Tyrosine-tRNA ligase CJO35_03400 IPR024088 Tyrosine-tRNA ligase, bacterial-type CJO35_03400 IPR036986 RNA-binding S4 domain superfamily CJO35_03400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_03405 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_03405 IPR036390 Winged helix DNA-binding domain superfamily CJO35_03405 IPR000835 MarR-type HTH domain CJO35_03405 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_03420 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJO35_03425 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CJO35_03425 IPR011659 WD40-like Beta Propeller CJO35_03430 IPR025062 Protein of unknown function DUF4003 CJO35_03445 IPR000223 Peptidase S26A, signal peptidase I CJO35_03445 IPR019533 Peptidase S26 CJO35_03445 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CJO35_03445 IPR019756 Peptidase S26A, signal peptidase I, serine active site CJO35_03445 IPR036286 LexA/Signal peptidase-like superfamily CJO35_03445 IPR019758 Peptidase S26A, signal peptidase I, conserved site CJO35_03455 IPR016040 NAD(P)-binding domain CJO35_03455 IPR036291 NAD(P)-binding domain superfamily CJO35_03460 IPR020449 Transcription regulator HTH, AraC- type CJO35_03460 IPR009057 Homeobox-like domain superfamily CJO35_03460 IPR018062 HTH domain AraC-type, conserved site CJO35_03460 IPR018060 DNA binding HTH domain, AraC-type CJO35_03465 IPR008972 Cupredoxin CJO35_03465 IPR011706 Multicopper oxidase, type 2 CJO35_03465 IPR001117 Multicopper oxidase, type 1 CJO35_03465 IPR011707 Multicopper oxidase, type 3 CJO35_03480 IPR027469 Cation efflux transmembrane domain superfamily CJO35_03480 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CJO35_03480 IPR027470 Cation efflux protein, cytoplasmic domain CJO35_03480 IPR002524 Cation efflux protein CJO35_03485 IPR011703 ATPase, AAA-3 CJO35_03485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03485 IPR041628 ChlI/MoxR, AAA lid domain CJO35_03490 IPR002881 Domain of unknown function DUF58 CJO35_03495 IPR002931 Transglutaminase-like CJO35_03495 IPR025403 Domain of unknown function DUF4129 CJO35_03495 IPR038765 Papain-like cysteine peptidase superfamily CJO35_03495 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal CJO35_03500 IPR029062 Class I glutamine amidotransferase-like CJO35_03500 IPR017926 Glutamine amidotransferase CJO35_03500 IPR001674 GMP synthase, C-terminal CJO35_03500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_03500 IPR004739 GMP synthase, glutamine amidotransferase CJO35_03500 IPR022310 NAD/GMP synthase CJO35_03500 IPR025777 GMP synthetase ATP pyrophosphatase domain CJO35_03500 IPR022955 GMP synthase CJO35_03510 IPR026033 Azaguanine-like transporters CJO35_03510 IPR006043 Xanthine/uracil/vitamin C permease CJO35_03520 IPR025072 Fur-regulated basic protein A CJO35_03525 IPR022930 Protein of unknown function UPF0316 CJO35_03525 IPR019264 Domain of unknown function DUF2179 CJO35_03530 IPR025930 NETI protein CJO35_03535 IPR035893 PurE domain superfamily CJO35_03535 IPR033747 Class I PurE CJO35_03535 IPR000031 PurE domain CJO35_03535 IPR024694 PurE, prokaryotic type CJO35_03540 IPR011761 ATP-grasp fold CJO35_03540 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CJO35_03540 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CJO35_03540 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CJO35_03540 IPR011054 Rudiment single hybrid motif CJO35_03540 IPR016185 Pre-ATP-grasp domain superfamily CJO35_03540 IPR013815 ATP-grasp fold, subdomain 1 CJO35_03545 IPR019468 Adenylosuccinate lyase C-terminal CJO35_03545 IPR024083 Fumarase/histidase, N-terminal CJO35_03545 IPR020557 Fumarate lyase, conserved site CJO35_03545 IPR000362 Fumarate lyase family CJO35_03545 IPR022761 Fumarate lyase, N-terminal CJO35_03545 IPR008948 L-Aspartase-like CJO35_03545 IPR004769 Adenylosuccinate lyase CJO35_03550 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase CJO35_03550 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CJO35_03550 IPR018236 SAICAR synthetase, conserved site CJO35_03550 IPR028923 SAICAR synthetase/ADE2, N-terminal CJO35_03555 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS CJO35_03555 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CJO35_03560 IPR017926 Glutamine amidotransferase CJO35_03560 IPR029062 Class I glutamine amidotransferase-like CJO35_03560 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ CJO35_03565 IPR016188 PurM-like, N-terminal domain CJO35_03565 IPR036676 PurM-like, C-terminal domain superfamily CJO35_03565 IPR010074 Phosphoribosylformylglycinamidine subunit PurL CJO35_03565 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CJO35_03565 IPR010918 PurM-like, C-terminal domain CJO35_03565 IPR036921 PurM-like, N-terminal domain superfamily CJO35_03570 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_03570 IPR017932 Glutamine amidotransferase type 2 domain CJO35_03570 IPR035584 Amidophosphoribosyltransferase, N-terminal CJO35_03570 IPR005854 Amidophosphoribosyltransferase CJO35_03570 IPR029057 Phosphoribosyltransferase-like CJO35_03570 IPR000836 Phosphoribosyltransferase domain CJO35_03575 IPR036921 PurM-like, N-terminal domain superfamily CJO35_03575 IPR016188 PurM-like, N-terminal domain CJO35_03575 IPR036676 PurM-like, C-terminal domain superfamily CJO35_03575 IPR010918 PurM-like, C-terminal domain CJO35_03575 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CJO35_03580 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CJO35_03580 IPR002376 Formyl transferase, N-terminal CJO35_03580 IPR036477 Formyl transferase, N-terminal domain superfamily CJO35_03580 IPR004607 Phosphoribosylglycinamide formyltransferase CJO35_03585 IPR036914 Methylglyoxal synthase-like domain superfamily CJO35_03585 IPR016193 Cytidine deaminase-like CJO35_03585 IPR024051 AICAR transformylase, duplicated domain superfamily CJO35_03585 IPR002695 Bifunctional purine biosynthesis protein PurH-like CJO35_03585 IPR011607 Methylglyoxal synthase-like domain CJO35_03590 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CJO35_03590 IPR016185 Pre-ATP-grasp domain superfamily CJO35_03590 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJO35_03590 IPR011054 Rudiment single hybrid motif CJO35_03590 IPR000115 Phosphoribosylglycinamide synthetase CJO35_03590 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CJO35_03590 IPR013815 ATP-grasp fold, subdomain 1 CJO35_03590 IPR011761 ATP-grasp fold CJO35_03590 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CJO35_03590 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CJO35_03605 IPR036396 Cytochrome P450 superfamily CJO35_03605 IPR017972 Cytochrome P450, conserved site CJO35_03605 IPR002397 Cytochrome P450, B-class CJO35_03605 IPR001128 Cytochrome P450 CJO35_03620 IPR021309 Protein of unknown function DUF2892 CJO35_03625 IPR011059 Metal-dependent hydrolase, composite domain superfamily CJO35_03625 IPR026912 Adenine deaminase C-terminal domain CJO35_03625 IPR006679 Adenine deaminase CJO35_03625 IPR006680 Amidohydrolase-related CJO35_03625 IPR032466 Metal-dependent hydrolase CJO35_03630 IPR023158 YerB-like superfamily CJO35_03630 IPR021416 Protein of unknown function DUF3048, N-terminal CJO35_03630 IPR035328 Protein of unknown function DUF3048, C-terminal domain CJO35_03635 IPR000831 Trp repressor CJO35_03635 IPR010921 Trp repressor/replication initiator CJO35_03635 IPR038116 TrpR-like superfamily CJO35_03635 IPR013368 TrpR homologue YerC/YecD CJO35_03640 IPR038597 GGGP/HepGP synthase superfamily CJO35_03640 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase CJO35_03640 IPR039074 GGGP/HepGP synthase group I CJO35_03645 IPR005751 ATP-dependent DNA helicase PcrA CJO35_03645 IPR000212 DNA helicase, UvrD/REP type CJO35_03645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03645 IPR014016 UvrD-like helicase, ATP-binding domain CJO35_03645 IPR034739 UvrD/AddA helicase, N-terminal CJO35_03645 IPR013986 DExx box DNA helicase domain superfamily CJO35_03645 IPR014017 UvrD-like DNA helicase, C-terminal CJO35_03650 IPR001357 BRCT domain CJO35_03650 IPR036420 BRCT domain superfamily CJO35_03650 IPR041663 DisA/LigA, helix-hairpin-helix motif CJO35_03650 IPR001679 NAD-dependent DNA ligase CJO35_03650 IPR010994 RuvA domain 2-like CJO35_03650 IPR033136 NAD-dependent DNA ligase, conserved site CJO35_03650 IPR018239 NAD-dependent DNA ligase, active site CJO35_03650 IPR013839 NAD-dependent DNA ligase, adenylation CJO35_03650 IPR013840 NAD-dependent DNA ligase, N-terminal CJO35_03650 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CJO35_03650 IPR012340 Nucleic acid-binding, OB-fold CJO35_03650 IPR004150 NAD-dependent DNA ligase, OB-fold CJO35_03650 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CJO35_03655 IPR011426 CamS sex pheromone cAM373 CJO35_03660 IPR041444 YhfZ, helix-turn-helix domain CJO35_03660 IPR032791 Uncharacterised protein YhfZ, C-terminal domain CJO35_03670 IPR021238 Protein of unknown function DUF2620 CJO35_03675 IPR019733 Uncharacterised protein family YhfT CJO35_03680 IPR017947 Aryldialkylphosphatase, zinc-binding site CJO35_03680 IPR001559 Phosphotriesterase CJO35_03680 IPR032466 Metal-dependent hydrolase CJO35_03685 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_03685 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_03685 IPR004839 Aminotransferase, class I/classII CJO35_03690 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_03690 IPR010045 Phosphopentomutase CJO35_03690 IPR024052 Phosphopentomutase DeoB cap domain superfamily CJO35_03690 IPR006124 Metalloenzyme CJO35_03695 IPR029066 PLP-binding barrel CJO35_03695 IPR001608 Alanine racemase, N-terminal CJO35_03700 IPR037171 NagB/RpiA transferase-like CJO35_03700 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CJO35_03700 IPR004547 Glucosamine-6-phosphate isomerase CJO35_03700 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CJO35_03705 IPR003416 MgtC/SapB/SrpB/YhiD family CJO35_03710 IPR038377 Sodium/glucose symporter superfamily CJO35_03710 IPR001734 Sodium/solute symporter CJO35_03710 IPR018212 Sodium/solute symporter, conserved site CJO35_03710 IPR011851 Sodium/proline symporter CJO35_03715 IPR003837 Glu-tRNAGln amidotransferase C subunit CJO35_03715 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CJO35_03720 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CJO35_03720 IPR036928 Amidase signature (AS) superfamily CJO35_03720 IPR020556 Amidase, conserved site CJO35_03720 IPR000120 Amidase CJO35_03720 IPR023631 Amidase signature domain CJO35_03725 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CJO35_03725 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CJO35_03725 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CJO35_03725 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CJO35_03725 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CJO35_03725 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CJO35_03725 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CJO35_03725 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CJO35_03725 IPR018027 Asn/Gln amidotransferase CJO35_03745 IPR001647 DNA-binding HTH domain, TetR-type CJO35_03745 IPR009057 Homeobox-like domain superfamily CJO35_03745 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_03750 IPR001036 Acriflavin resistance protein CJO35_03750 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJO35_03760 IPR000182 GNAT domain CJO35_03760 IPR016181 Acyl-CoA N-acyltransferase CJO35_03765 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CJO35_03765 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CJO35_03765 IPR036452 Ribonucleoside hydrolase-like CJO35_03765 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA CJO35_03765 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CJO35_03770 IPR001206 Diacylglycerol kinase, catalytic domain CJO35_03770 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CJO35_03770 IPR005218 Diacylglycerol/lipid kinase CJO35_03770 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CJO35_03775 IPR010280 (Uracil-5)-methyltransferase family CJO35_03775 IPR002792 TRAM domain CJO35_03775 IPR030390 RNA methyltransferase TrmA, active site CJO35_03775 IPR030391 RNA methyltransferase TrmA, conserved site CJO35_03775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_03775 IPR012340 Nucleic acid-binding, OB-fold CJO35_03785 IPR018117 DNA methylase, C-5 cytosine-specific, active site CJO35_03785 IPR001525 C-5 cytosine methyltransferase CJO35_03785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_03795 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_03795 IPR003352 Phosphotransferase system, EIIC CJO35_03795 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CJO35_03795 IPR036878 Glucose permease domain IIB CJO35_03795 IPR011055 Duplicated hybrid motif CJO35_03795 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component CJO35_03795 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_03795 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_03800 IPR018120 Glycoside hydrolase family 1, active site CJO35_03800 IPR017853 Glycoside hydrolase superfamily CJO35_03800 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CJO35_03800 IPR001360 Glycoside hydrolase family 1 CJO35_03805 IPR004341 CAT RNA-binding domain CJO35_03805 IPR036650 CAT RNA-binding domain superfamily CJO35_03805 IPR011608 PRD domain CJO35_03805 IPR036634 PRD domain superfamily CJO35_03805 IPR001550 Transcription antiterminator, conserved site CJO35_03810 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_03810 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_03815 IPR030968 Phr family, secreted RapG/RapK phosphatase inhibitor CJO35_03830 IPR026562 Probable transcriptional regulatory protein YeeN CJO35_03830 IPR029072 YebC-like CJO35_03830 IPR017856 Integrase-like, N-terminal CJO35_03830 IPR002876 Transcriptional regulator TACO1-like CJO35_03830 IPR026564 Transcriptional regulator TACO1-like, domain 3 CJO35_03835 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_03835 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_03845 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_03845 IPR015590 Aldehyde dehydrogenase domain CJO35_03845 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_03845 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_03845 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CJO35_03850 IPR029151 Periplasmic sensor-like domain superfamily CJO35_03850 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_03855 IPR001898 Solute carrier family 13 CJO35_03860 IPR032781 ABC-transporter extension domain CJO35_03860 IPR017871 ABC transporter, conserved site CJO35_03860 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CJO35_03860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03860 IPR032524 ABC transporter Uup, C-terminal CJO35_03860 IPR003439 ABC transporter-like CJO35_03860 IPR003593 AAA+ ATPase domain CJO35_03865 IPR003801 GTP cyclohydrolase FolE2/MptA CJO35_03865 IPR022838 GTP cyclohydrolase FolE2 CJO35_03870 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_03880 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CJO35_03880 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CJO35_03880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03885 IPR005499 6-carboxyhexanoate--CoA ligase CJO35_03890 IPR005814 Aminotransferase class-III CJO35_03890 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CJO35_03890 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_03890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_03890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_03895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_03895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_03895 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_03895 IPR004839 Aminotransferase, class I/classII CJO35_03895 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CJO35_03895 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CJO35_03900 IPR004472 Dethiobiotin synthase BioD CJO35_03900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03905 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CJO35_03905 IPR024177 Biotin synthase CJO35_03905 IPR013785 Aldolase-type TIM barrel CJO35_03905 IPR007197 Radical SAM CJO35_03905 IPR010722 Biotin and thiamin synthesis-associated domain CJO35_03905 IPR006638 Elp3/MiaB/NifB CJO35_03910 IPR001128 Cytochrome P450 CJO35_03910 IPR002397 Cytochrome P450, B-class CJO35_03910 IPR036396 Cytochrome P450 superfamily CJO35_03910 IPR017972 Cytochrome P450, conserved site CJO35_03920 IPR037392 YfmP, Helix-Turn-Helix DNA binding domain CJO35_03920 IPR000551 MerR-type HTH domain CJO35_03920 IPR009061 Putative DNA-binding domain superfamily CJO35_03925 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_03925 IPR020846 Major facilitator superfamily domain CJO35_03925 IPR011701 Major facilitator superfamily CJO35_03925 IPR036259 MFS transporter superfamily CJO35_03930 IPR017871 ABC transporter, conserved site CJO35_03930 IPR003593 AAA+ ATPase domain CJO35_03930 IPR032781 ABC-transporter extension domain CJO35_03930 IPR003439 ABC transporter-like CJO35_03930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_03935 IPR001650 Helicase, C-terminal CJO35_03935 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_03935 IPR011545 DEAD/DEAH box helicase domain CJO35_03940 IPR011032 GroES-like superfamily CJO35_03940 IPR041694 Oxidoreductase, N-terminal domain CJO35_03940 IPR013149 Alcohol dehydrogenase, C-terminal CJO35_03940 IPR020843 Polyketide synthase, enoylreductase domain CJO35_03940 IPR036291 NAD(P)-binding domain superfamily CJO35_03945 IPR021579 Protein of unknown function DUF3212 CJO35_03945 IPR038074 YfmB domain superfamily CJO35_03950 IPR025889 General stress protein 17M-like domain CJO35_03955 IPR001898 Solute carrier family 13 CJO35_03955 IPR030676 Citrate carrier CitT-related CJO35_03975 IPR001279 Metallo-beta-lactamase CJO35_03975 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_03985 IPR036119 Nitric oxide synthase, N-terminal domain superfamily CJO35_03985 IPR017142 Nitric oxide synthase, oxygenase subunit CJO35_03985 IPR004030 Nitric oxide synthase, N-terminal CJO35_03990 IPR025962 SdpI/YhfL protein family CJO35_03990 IPR012867 Domain of unknown function DUF1648 CJO35_03990 IPR026272 Immunity protein SdpI CJO35_03995 IPR036390 Winged helix DNA-binding domain superfamily CJO35_03995 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_03995 IPR001845 HTH ArsR-type DNA-binding domain CJO35_03995 IPR011991 ArsR-like helix-turn-helix domain CJO35_04000 IPR036046 Acylphosphatase-like domain superfamily CJO35_04000 IPR020456 Acylphosphatase CJO35_04000 IPR001792 Acylphosphatase-like domain CJO35_04000 IPR017968 Acylphosphatase, conserved site CJO35_04005 IPR011037 Pyruvate kinase-like, insert domain superfamily CJO35_04005 IPR005302 Molybdenum cofactor sulfurase, C-terminal CJO35_04005 IPR005163 3-alpha domain CJO35_04010 IPR022580 Protein of unknown function DUF2639 CJO35_04020 IPR001714 Peptidase M24, methionine aminopeptidase CJO35_04020 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CJO35_04020 IPR000994 Peptidase M24 CJO35_04020 IPR036005 Creatinase/aminopeptidase-like CJO35_04025 IPR000917 Sulfatase, N-terminal CJO35_04025 IPR012160 Lipoteichoic acid synthase-like CJO35_04025 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_04030 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CJO35_04035 IPR001463 Sodium:alanine symporter CJO35_04040 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_04040 IPR036878 Glucose permease domain IIB CJO35_04040 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_04040 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_04040 IPR011296 Phosphotransferase system, trehalose-specific IIBC component CJO35_04040 IPR003352 Phosphotransferase system, EIIC CJO35_04040 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CJO35_04045 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CJO35_04045 IPR017853 Glycoside hydrolase superfamily CJO35_04045 IPR032091 Maltogenic Amylase, C-terminal CJO35_04045 IPR012769 Trehalose-6-phosphate hydrolase CJO35_04045 IPR013780 Glycosyl hydrolase, all-beta CJO35_04050 IPR036390 Winged helix DNA-binding domain superfamily CJO35_04050 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_04050 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CJO35_04050 IPR012770 Trehalose operon transcriptional repressor CJO35_04050 IPR000524 Transcription regulator HTH, GntR CJO35_04050 IPR011663 UbiC transcription regulator-associated CJO35_04075 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB CJO35_04075 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJO35_04075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_04075 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_04075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_04080 IPR011004 Trimeric LpxA-like superfamily CJO35_04080 IPR001451 Hexapeptide repeat CJO35_04080 IPR005881 Serine O-acetyltransferase CJO35_04080 IPR018357 Hexapeptide transferase, conserved site CJO35_04080 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CJO35_04085 IPR036291 NAD(P)-binding domain superfamily CJO35_04085 IPR001509 NAD-dependent epimerase/dehydratase CJO35_04095 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_04095 IPR001173 Glycosyltransferase 2-like CJO35_04100 IPR013026 Tetratricopeptide repeat-containing domain CJO35_04100 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_04100 IPR019734 Tetratricopeptide repeat CJO35_04100 IPR001173 Glycosyltransferase 2-like CJO35_04100 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_04105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_04105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_04105 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJO35_04105 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_04110 IPR004104 Oxidoreductase, C-terminal CJO35_04110 IPR036291 NAD(P)-binding domain superfamily CJO35_04110 IPR000683 Oxidoreductase, N-terminal CJO35_04115 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_04115 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CJO35_04115 IPR036291 NAD(P)-binding domain superfamily CJO35_04115 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CJO35_04115 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CJO35_04115 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CJO35_04115 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CJO35_04115 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CJO35_04125 IPR002577 Helix-turn-helix, HxlR type CJO35_04125 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_04125 IPR036390 Winged helix DNA-binding domain superfamily CJO35_04130 IPR029479 Nitroreductase CJO35_04130 IPR000415 Nitroreductase-like CJO35_04130 IPR033878 Nitroreductase NfsB-like CJO35_04135 IPR006179 5'-Nucleotidase/apyrase CJO35_04135 IPR006146 5'-Nucleotidase, conserved site CJO35_04135 IPR029052 Metallo-dependent phosphatase-like CJO35_04135 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CJO35_04135 IPR008334 5'-Nucleotidase, C-terminal CJO35_04135 IPR019931 LPXTG cell wall anchor domain CJO35_04135 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_04135 IPR041827 CpdB, N-terminal metallophosphatase domain CJO35_04140 IPR029062 Class I glutamine amidotransferase-like CJO35_04140 IPR006286 Deglycase PfpI CJO35_04140 IPR002818 DJ-1/PfpI CJO35_04145 IPR009507 Protein of unknown function UPF0435 CJO35_04150 IPR001463 Sodium:alanine symporter CJO35_04155 IPR017867 Protein-tyrosine phosphatase, low molecular weight CJO35_04155 IPR023485 Phosphotyrosine protein phosphatase I CJO35_04155 IPR036196 Phosphotyrosine protein phosphatase I superfamily CJO35_04165 IPR017039 Virulence factor BrkB CJO35_04170 IPR036259 MFS transporter superfamily CJO35_04170 IPR011701 Major facilitator superfamily CJO35_04170 IPR020846 Major facilitator superfamily domain CJO35_04180 IPR004837 Sodium/calcium exchanger membrane region CJO35_04180 IPR004798 Calcium/proton exchanger CAX CJO35_04180 IPR004713 Calcium/proton exchanger CJO35_04185 IPR025548 YfkD-like protein CJO35_04190 IPR014866 YfkB-like domain CJO35_04190 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB CJO35_04190 IPR007197 Radical SAM CJO35_04190 IPR013785 Aldolase-type TIM barrel CJO35_04200 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_04200 IPR002509 NodB homology domain CJO35_04200 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA CJO35_04205 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CJO35_04205 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CJO35_04205 IPR016205 Glycerol dehydrogenase CJO35_04215 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CJO35_04215 IPR004488 Magnesium/cobalt transport protein CorA CJO35_04220 IPR003265 HhH-GPD domain CJO35_04220 IPR011257 DNA glycosylase CJO35_04225 IPR030390 RNA methyltransferase TrmA, active site CJO35_04225 IPR030391 RNA methyltransferase TrmA, conserved site CJO35_04225 IPR012340 Nucleic acid-binding, OB-fold CJO35_04225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_04225 IPR002792 TRAM domain CJO35_04225 IPR010280 (Uracil-5)-methyltransferase family CJO35_04255 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase CJO35_04255 IPR006326 UDP-glycosyltransferase, MGT CJO35_04260 IPR024485 Protein of unknown function DUF2680 CJO35_04265 IPR011701 Major facilitator superfamily CJO35_04265 IPR005829 Sugar transporter, conserved site CJO35_04265 IPR036259 MFS transporter superfamily CJO35_04265 IPR020846 Major facilitator superfamily domain CJO35_04270 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_04270 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_04270 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_04270 IPR010973 Phosphotransferase system, sucrose-specific IIBC component CJO35_04270 IPR003352 Phosphotransferase system, EIIC CJO35_04270 IPR036878 Glucose permease domain IIB CJO35_04275 IPR004341 CAT RNA-binding domain CJO35_04275 IPR036650 CAT RNA-binding domain superfamily CJO35_04275 IPR001550 Transcription antiterminator, conserved site CJO35_04275 IPR011608 PRD domain CJO35_04275 IPR036634 PRD domain superfamily CJO35_04280 IPR036874 Carbonic anhydrase superfamily CJO35_04285 IPR018752 Uncharacterised protein family UPF0753 CJO35_04290 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CJO35_04290 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CJO35_04295 IPR018745 Domain of unknown function DUF2294 CJO35_04305 IPR001017 Dehydrogenase, E1 component CJO35_04305 IPR029061 Thiamin diphosphate-binding fold CJO35_04310 IPR033248 Transketolase, C-terminal domain CJO35_04310 IPR005475 Transketolase-like, pyrimidine-binding domain CJO35_04310 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CJO35_04310 IPR029061 Thiamin diphosphate-binding fold CJO35_04315 IPR011053 Single hybrid motif CJO35_04315 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_04315 IPR036625 E3-binding domain superfamily CJO35_04315 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CJO35_04315 IPR004167 Peripheral subunit-binding domain CJO35_04315 IPR000089 Biotin/lipoyl attachment CJO35_04320 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO35_04320 IPR006258 Dihydrolipoamide dehydrogenase CJO35_04320 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CJO35_04320 IPR023753 FAD/NAD(P)-binding domain CJO35_04320 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_04320 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CJO35_04320 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CJO35_04325 IPR002078 RNA polymerase sigma factor 54 interaction domain CJO35_04325 IPR003018 GAF domain CJO35_04325 IPR009057 Homeobox-like domain superfamily CJO35_04325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04325 IPR002197 DNA binding HTH domain, Fis-type CJO35_04325 IPR029016 GAF-like domain superfamily CJO35_04325 IPR025944 Sigma-54 interaction domain, conserved site CJO35_04325 IPR003593 AAA+ ATPase domain CJO35_04330 IPR003844 Uncharacterised protein family UPF0060 CJO35_04335 IPR001088 Glycoside hydrolase, family 4 CJO35_04335 IPR022616 Glycosyl hydrolase, family 4, C-terminal CJO35_04335 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CJO35_04335 IPR036291 NAD(P)-binding domain superfamily CJO35_04335 IPR019802 Glycoside hydrolase, family 4, conserved site CJO35_04340 IPR009057 Homeobox-like domain superfamily CJO35_04340 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_04340 IPR000281 Helix-turn-helix protein RpiR CJO35_04340 IPR035472 RpiR-like, SIS domain CJO35_04340 IPR001347 Sugar isomerase (SIS) CJO35_04345 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_04345 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_04345 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component CJO35_04345 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CJO35_04345 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_04345 IPR036878 Glucose permease domain IIB CJO35_04345 IPR003352 Phosphotransferase system, EIIC CJO35_04360 IPR036390 Winged helix DNA-binding domain superfamily CJO35_04360 IPR002577 Helix-turn-helix, HxlR type CJO35_04360 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_04365 IPR032808 DoxX family CJO35_04370 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_04370 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_04370 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_04370 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II CJO35_04375 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain CJO35_04375 IPR006710 Glycoside hydrolase, family 43 CJO35_04375 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_04375 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_04380 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_04380 IPR006710 Glycoside hydrolase, family 43 CJO35_04380 IPR041542 Beta-xylosidase, C-terminal Concanavalin A-like domain CJO35_04380 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_04385 IPR003313 AraC-type arabinose-binding/dimerisation domain CJO35_04385 IPR037923 Transcription regulator HTH-like CJO35_04385 IPR018060 DNA binding HTH domain, AraC-type CJO35_04385 IPR018062 HTH domain AraC-type, conserved site CJO35_04385 IPR009057 Homeobox-like domain superfamily CJO35_04390 IPR006059 Bacterial extracellular solute-binding protein CJO35_04400 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_04400 IPR000086 NUDIX hydrolase domain CJO35_04405 IPR023774 Putative metal-dependent hydrolase YfiT CJO35_04405 IPR034660 DinB/YfiT-like putative metalloenzymes CJO35_04405 IPR024775 DinB-like domain CJO35_04410 IPR024775 DinB-like domain CJO35_04410 IPR023774 Putative metal-dependent hydrolase YfiT CJO35_04410 IPR034660 DinB/YfiT-like putative metalloenzymes CJO35_04415 IPR016181 Acyl-CoA N-acyltransferase CJO35_04415 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CJO35_04415 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CJO35_04420 IPR003719 Phenazine biosynthesis PhzF protein CJO35_04425 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CJO35_04425 IPR000415 Nitroreductase-like CJO35_04425 IPR029479 Nitroreductase CJO35_04430 IPR025435 YfhD-like protein CJO35_04445 IPR001509 NAD-dependent epimerase/dehydratase CJO35_04445 IPR013549 Domain of unknown function DUF1731 CJO35_04445 IPR036291 NAD(P)-binding domain superfamily CJO35_04445 IPR010099 Epimerase family protein SDR39U1 CJO35_04450 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_04450 IPR003783 Regulatory protein RecX CJO35_04455 IPR014938 Protein of unknown function DUF1811 CJO35_04455 IPR036289 Hypothetical protein YfhH CJO35_04465 IPR012611 Small acid-soluble spore protein, SspK CJO35_04470 IPR026952 WVELL protein CJO35_04480 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_04480 IPR001173 Glycosyltransferase 2-like CJO35_04490 IPR018580 Uncharacterised protein family YfhO CJO35_04495 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CJO35_04500 IPR029119 MutY, C-terminal CJO35_04500 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CJO35_04500 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_04500 IPR003265 HhH-GPD domain CJO35_04500 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CJO35_04500 IPR005760 A/G-specific adenine glycosylase MutY CJO35_04500 IPR011257 DNA glycosylase CJO35_04510 IPR036291 NAD(P)-binding domain superfamily CJO35_04510 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_04520 IPR025572 YgaB-like protein CJO35_04525 IPR016882 Uncharacterised protein family UPF0374 CJO35_04525 IPR007295 Domain of unknown function DUF402 CJO35_04525 IPR035930 FomD-like superfamily CJO35_04530 IPR039421 Type I protein exporter CJO35_04530 IPR011527 ABC transporter type 1, transmembrane domain CJO35_04530 IPR003593 AAA+ ATPase domain CJO35_04530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04530 IPR017871 ABC transporter, conserved site CJO35_04530 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_04530 IPR003439 ABC transporter-like CJO35_04535 IPR017871 ABC transporter, conserved site CJO35_04535 IPR003593 AAA+ ATPase domain CJO35_04535 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_04535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04535 IPR003439 ABC transporter-like CJO35_04540 IPR003439 ABC transporter-like CJO35_04540 IPR017871 ABC transporter, conserved site CJO35_04540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04540 IPR003593 AAA+ ATPase domain CJO35_04540 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_04545 IPR030678 Peptide/nickel binding protein, MppA-type CJO35_04545 IPR039424 Solute-binding protein family 5 CJO35_04545 IPR023765 Solute-binding protein family 5, conserved site CJO35_04545 IPR000914 Solute-binding protein family 5 domain CJO35_04560 IPR010343 Aromatic acid exporter family member 1 CJO35_04565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_04565 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CJO35_04565 IPR005814 Aminotransferase class-III CJO35_04565 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_04565 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_04570 IPR024706 Peroxiredoxin, AhpC-type CJO35_04570 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CJO35_04570 IPR013766 Thioredoxin domain CJO35_04570 IPR036249 Thioredoxin-like superfamily CJO35_04575 IPR002481 Ferric-uptake regulator CJO35_04575 IPR036390 Winged helix DNA-binding domain superfamily CJO35_04575 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_04580 IPR020912 Uncharacterised protein family UPF0295 CJO35_04585 IPR029348 Nucleotidyltransferase-like domain CJO35_04585 IPR041143 YgxA-like, helix-turn-helix domain CJO35_04685 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_04685 IPR019734 Tetratricopeptide repeat CJO35_04685 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_04685 IPR013026 Tetratricopeptide repeat-containing domain CJO35_04720 IPR036366 PGBD superfamily CJO35_04720 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CJO35_04720 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CJO35_04720 IPR036365 PGBD-like superfamily CJO35_04720 IPR002477 Peptidoglycan binding-like CJO35_04730 IPR006829 LXG domain CJO35_04730 IPR027797 Pre-toxin TG domain CJO35_04730 IPR003615 HNH nuclease CJO35_04735 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_04735 IPR013026 Tetratricopeptide repeat-containing domain CJO35_04735 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_04735 IPR019734 Tetratricopeptide repeat CJO35_04740 IPR004095 TGS CJO35_04740 IPR012676 TGS-like CJO35_04740 IPR002320 Threonine-tRNA ligase, class IIa CJO35_04740 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CJO35_04740 IPR033728 Threonine-tRNA ligase catalytic core domain CJO35_04740 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CJO35_04740 IPR004154 Anticodon-binding CJO35_04740 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_04740 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CJO35_04740 IPR036621 Anticodon-binding domain superfamily CJO35_04740 IPR012675 Beta-grasp domain superfamily CJO35_04750 IPR001381 3-dehydroquinate dehydratase type I CJO35_04750 IPR013785 Aldolase-type TIM barrel CJO35_04750 IPR018508 3-dehydroquinate dehydratase, active site CJO35_04755 IPR038521 ThiC/Bza superfamily CJO35_04755 IPR025747 ThiC-associated domain CJO35_04755 IPR037509 Phosphomethylpyrimidine synthase CJO35_04755 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CJO35_04760 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB CJO35_04760 IPR017871 ABC transporter, conserved site CJO35_04760 IPR003593 AAA+ ATPase domain CJO35_04760 IPR003439 ABC transporter-like CJO35_04760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04765 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJO35_04765 IPR015168 SsuA/THI5-like CJO35_04765 IPR010067 Aliphatic sulfonates-binding protein CJO35_04770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_04770 IPR035906 MetI-like superfamily CJO35_04775 IPR011251 Luciferase-like domain CJO35_04775 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent CJO35_04775 IPR036661 Luciferase-like domain superfamily CJO35_04785 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_04785 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_04795 IPR017871 ABC transporter, conserved site CJO35_04795 IPR003593 AAA+ ATPase domain CJO35_04795 IPR025302 Domain of unknown function DUF4162 CJO35_04795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04795 IPR003439 ABC transporter-like CJO35_04815 IPR023036 Ribosomal protein S14, bacterial/plastid CJO35_04815 IPR001209 Ribosomal protein S14 CJO35_04815 IPR018271 Ribosomal protein S14, conserved site CJO35_04830 IPR004155 PBS lyase HEAT-like repeat CJO35_04830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJO35_04830 IPR011989 Armadillo-like helical CJO35_04830 IPR013542 Domain of unknown function DUF1730 CJO35_04830 IPR004453 Epoxyqueuosine reductase QueG CJO35_04830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_04830 IPR016024 Armadillo-type fold CJO35_04835 IPR024301 Putative amidase domain CJO35_04840 IPR001537 tRNA/rRNA methyltransferase, SpoU type CJO35_04840 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CJO35_04840 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJO35_04840 IPR029028 Alpha/beta knot methyltransferases CJO35_04845 IPR025063 Protein of unknown function DUF4004 CJO35_04850 IPR007607 Bactofilin A/B CJO35_04860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04860 IPR013153 PrkA AAA domain CJO35_04860 IPR010650 PrkA C-terminal domain CJO35_04860 IPR016230 Serine-protein kinase, PrkA CJO35_04865 IPR006698 Uncharacterised protein family UPF0229 CJO35_04865 IPR014230 Sporulation protein YhbH CJO35_04870 IPR011053 Single hybrid motif CJO35_04875 IPR036259 MFS transporter superfamily CJO35_04875 IPR011701 Major facilitator superfamily CJO35_04875 IPR004638 Drug resistance transporter EmrB-like CJO35_04875 IPR020846 Major facilitator superfamily domain CJO35_04880 IPR029039 Flavoprotein-like superfamily CJO35_04880 IPR005025 NADPH-dependent FMN reductase-like CJO35_04880 IPR008254 Flavodoxin/nitric oxide synthase CJO35_04900 IPR003593 AAA+ ATPase domain CJO35_04900 IPR003439 ABC transporter-like CJO35_04900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04905 IPR017871 ABC transporter, conserved site CJO35_04905 IPR003439 ABC transporter-like CJO35_04905 IPR003593 AAA+ ATPase domain CJO35_04905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04910 IPR032688 ABC-2 family transporter protein CJO35_04915 IPR011129 Cold shock domain CJO35_04915 IPR019844 Cold-shock (CSD) domain CJO35_04915 IPR002059 Cold-shock protein, DNA-binding CJO35_04915 IPR012156 Cold shock, CspA CJO35_04915 IPR012340 Nucleic acid-binding, OB-fold CJO35_04920 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CJO35_04920 IPR018449 NIL domain CJO35_04920 IPR003439 ABC transporter-like CJO35_04920 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CJO35_04920 IPR003593 AAA+ ATPase domain CJO35_04920 IPR026253 Methionine import ATP-binding protein MetN CJO35_04920 IPR017871 ABC transporter, conserved site CJO35_04920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_04925 IPR035906 MetI-like superfamily CJO35_04925 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_04930 IPR004872 Lipoprotein NlpA family CJO35_04935 IPR001991 Sodium:dicarboxylate symporter CJO35_04935 IPR036458 Sodium:dicarboxylate symporter superfamily CJO35_04945 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CJO35_04945 IPR029058 Alpha/Beta hydrolase fold CJO35_04945 IPR011042 Six-bladed beta-propeller, TolB-like CJO35_04950 IPR014247 Sporulation lipoprotein YhcN/YlaJ CJO35_04950 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like CJO35_04960 IPR012851 Spore coat protein CotF-like CJO35_04965 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_04965 IPR000014 PAS domain CJO35_04965 IPR035965 PAS domain superfamily CJO35_04965 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_04965 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_04965 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_04965 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_04965 IPR005467 Histidine kinase domain CJO35_04965 IPR013767 PAS fold CJO35_04970 IPR019948 Gram-positive LPXTG cell wall anchor CJO35_04970 IPR019931 LPXTG cell wall anchor domain CJO35_04970 IPR006179 5'-Nucleotidase/apyrase CJO35_04970 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_04970 IPR006146 5'-Nucleotidase, conserved site CJO35_04970 IPR029052 Metallo-dependent phosphatase-like CJO35_04970 IPR012340 Nucleic acid-binding, OB-fold CJO35_04970 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CJO35_04970 IPR008334 5'-Nucleotidase, C-terminal CJO35_04970 IPR035437 SNase-like, OB-fold superfamily CJO35_04970 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJO35_04970 IPR041831 Endonuclease YhcR, metallophosphatase domain CJO35_04975 IPR023365 Sortase domain superfamily CJO35_04975 IPR005754 Sortase family CJO35_04975 IPR041999 Sortase D, type 1 CJO35_04980 IPR020103 Pseudouridine synthase, catalytic domain superfamily CJO35_04980 IPR006225 Pseudouridine synthase, RluC/RluD CJO35_04980 IPR036986 RNA-binding S4 domain superfamily CJO35_04980 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CJO35_04980 IPR006145 Pseudouridine synthase, RsuA/RluA CJO35_04980 IPR002942 RNA-binding S4 domain CJO35_04985 IPR020355 Uncharacterised protein family YhcU CJO35_04990 IPR000644 CBS domain CJO35_04995 IPR023214 HAD superfamily CJO35_04995 IPR036412 HAD-like superfamily CJO35_04995 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CJO35_04995 IPR041492 Haloacid dehalogenase-like hydrolase CJO35_04995 IPR006439 HAD hydrolase, subfamily IA CJO35_05000 IPR003010 Carbon-nitrogen hydrolase CJO35_05000 IPR036526 Carbon-nitrogen hydrolase superfamily CJO35_05000 IPR000182 GNAT domain CJO35_05000 IPR001110 Uncharacterised protein family UPF0012, conserved site CJO35_05000 IPR016181 Acyl-CoA N-acyltransferase CJO35_05005 IPR032524 ABC transporter Uup, C-terminal CJO35_05005 IPR017871 ABC transporter, conserved site CJO35_05005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05005 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CJO35_05005 IPR032781 ABC-transporter extension domain CJO35_05005 IPR003439 ABC transporter-like CJO35_05005 IPR003593 AAA+ ATPase domain CJO35_05015 IPR024002 Formate/nitrite transporter, conserved site CJO35_05015 IPR000292 Formate/nitrite transporter CJO35_05015 IPR023271 Aquaporin-like CJO35_05020 IPR004776 Membrane transport protein CJO35_05025 IPR013154 Alcohol dehydrogenase, N-terminal CJO35_05025 IPR013149 Alcohol dehydrogenase, C-terminal CJO35_05025 IPR020843 Polyketide synthase, enoylreductase domain CJO35_05025 IPR036291 NAD(P)-binding domain superfamily CJO35_05025 IPR011032 GroES-like superfamily CJO35_05030 IPR006699 Glycerol uptake operon antiterminator CJO35_05030 IPR035928 GlpP-like superfamily CJO35_05035 IPR022357 Major intrinsic protein, conserved site CJO35_05035 IPR023271 Aquaporin-like CJO35_05035 IPR000425 Major intrinsic protein CJO35_05040 IPR018484 Carbohydrate kinase, FGGY, N-terminal CJO35_05040 IPR005999 Glycerol kinase CJO35_05040 IPR000577 Carbohydrate kinase, FGGY CJO35_05040 IPR018485 Carbohydrate kinase, FGGY, C-terminal CJO35_05040 IPR018483 Carbohydrate kinase, FGGY, conserved site CJO35_05045 IPR006076 FAD dependent oxidoreductase CJO35_05045 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CJO35_05045 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CJO35_05045 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_05045 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CJO35_05050 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CJO35_05050 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CJO35_05050 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CJO35_05050 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CJO35_05050 IPR005843 Alpha-D-phosphohexomutase, C-terminal CJO35_05050 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CJO35_05050 IPR016066 Alpha-D-phosphohexomutase, conserved site CJO35_05050 IPR005841 Alpha-D-phosphohexomutase superfamily CJO35_05065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_05065 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_05065 IPR029016 GAF-like domain superfamily CJO35_05065 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_05065 IPR003018 GAF domain CJO35_05070 IPR011006 CheY-like superfamily CJO35_05070 IPR000792 Transcription regulator LuxR, C-terminal CJO35_05070 IPR001789 Signal transduction response regulator, receiver domain CJO35_05070 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_05075 IPR005025 NADPH-dependent FMN reductase-like CJO35_05075 IPR029039 Flavoprotein-like superfamily CJO35_05080 IPR025431 YhdB-like protein CJO35_05085 IPR024987 Protein of unknown function DUF3889 CJO35_05090 IPR030489 Transcription regulator Rrf2-type, conserved site CJO35_05090 IPR036390 Winged helix DNA-binding domain superfamily CJO35_05090 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_05090 IPR000944 Transcription regulator Rrf2-type CJO35_05095 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CJO35_05095 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CJO35_05095 IPR017927 FAD-binding domain, ferredoxin reductase-type CJO35_05095 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CJO35_05095 IPR001834 NADH:cytochrome b5 reductase-like CJO35_05095 IPR023950 Flavohemoprotein CJO35_05095 IPR000971 Globin CJO35_05095 IPR001433 Oxidoreductase FAD/NAD(P)-binding CJO35_05095 IPR017938 Riboflavin synthase-like beta-barrel CJO35_05095 IPR012292 Globin/Protoglobin CJO35_05095 IPR009050 Globin-like superfamily CJO35_05100 IPR007390 Sporulation stage V, protein R CJO35_05105 IPR038765 Papain-like cysteine peptidase superfamily CJO35_05105 IPR000064 Endopeptidase, NLPC/P60 domain CJO35_05105 IPR036779 LysM domain superfamily CJO35_05105 IPR018392 LysM domain CJO35_05110 IPR005119 LysR, substrate-binding CJO35_05110 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_05110 IPR036390 Winged helix DNA-binding domain superfamily CJO35_05110 IPR000847 Transcription regulator HTH, LysR CJO35_05115 IPR016142 Citrate synthase-like, large alpha subdomain CJO35_05115 IPR036969 Citrate synthase superfamily CJO35_05115 IPR019810 Citrate synthase active site CJO35_05115 IPR016143 Citrate synthase-like, small alpha subdomain CJO35_05115 IPR002020 Citrate synthase CJO35_05115 IPR024176 Citrate synthase, bacterial-type CJO35_05120 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CJO35_05120 IPR011042 Six-bladed beta-propeller, TolB-like CJO35_05120 IPR012938 Glucose/Sorbosone dehydrogenase CJO35_05125 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_05125 IPR036291 NAD(P)-binding domain superfamily CJO35_05125 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_05130 IPR000175 Sodium:neurotransmitter symporter CJO35_05130 IPR037272 Sodium:neurotransmitter symporter superfamily CJO35_05140 IPR010499 Bacterial transcription activator, effector binding CJO35_05140 IPR018062 HTH domain AraC-type, conserved site CJO35_05140 IPR011256 Regulatory factor, effector binding domain superfamily CJO35_05140 IPR029442 GyrI-like small molecule binding domain CJO35_05140 IPR009057 Homeobox-like domain superfamily CJO35_05140 IPR020449 Transcription regulator HTH, AraC- type CJO35_05140 IPR018060 DNA binding HTH domain, AraC-type CJO35_05145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_05145 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_05145 IPR004839 Aminotransferase, class I/classII CJO35_05145 IPR000524 Transcription regulator HTH, GntR CJO35_05145 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_05145 IPR036390 Winged helix DNA-binding domain superfamily CJO35_05155 IPR020496 Sigma-M inhibitor YhdK CJO35_05160 IPR029101 Sigma factor regulator, N-terminal CJO35_05160 IPR025672 Sigma factor regulator C-terminal domain CJO35_05165 IPR013325 RNA polymerase sigma factor, region 2 CJO35_05165 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CJO35_05165 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_05165 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_05165 IPR039425 RNA polymerase sigma-70 like CJO35_05165 IPR014284 RNA polymerase sigma-70 like domain CJO35_05165 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_05165 IPR014296 RNA polymerase sigma-M, bacillaceae CJO35_05165 IPR007627 RNA polymerase sigma-70 region 2 CJO35_05170 IPR013096 Cupin 2, conserved barrel CJO35_05170 IPR014710 RmlC-like jelly roll fold CJO35_05170 IPR011051 RmlC-like cupin domain superfamily CJO35_05180 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CJO35_05180 IPR002123 Phospholipid/glycerol acyltransferase CJO35_05185 IPR008523 Protein of unknown function DUF805 CJO35_05195 IPR001647 DNA-binding HTH domain, TetR-type CJO35_05195 IPR009057 Homeobox-like domain superfamily CJO35_05195 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_05200 IPR036318 FAD-binding, type PCMH-like superfamily CJO35_05200 IPR005170 Transporter-associated domain CJO35_05200 IPR016169 FAD-binding, type PCMH, subdomain 2 CJO35_05200 IPR000644 CBS domain CJO35_05200 IPR002550 CNNM, transmembrane domain CJO35_05205 IPR009061 Putative DNA-binding domain superfamily CJO35_05205 IPR000551 MerR-type HTH domain CJO35_05210 IPR002550 CNNM, transmembrane domain CJO35_05210 IPR016169 FAD-binding, type PCMH, subdomain 2 CJO35_05210 IPR005170 Transporter-associated domain CJO35_05210 IPR036318 FAD-binding, type PCMH-like superfamily CJO35_05210 IPR000644 CBS domain CJO35_05225 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CJO35_05225 IPR007730 Sporulation-like domain CJO35_05225 IPR036680 Sporulation-like domain superfamily CJO35_05230 IPR003691 Putative fluoride ion transporter CrcB CJO35_05235 IPR003691 Putative fluoride ion transporter CrcB CJO35_05240 IPR030395 Glycerophosphodiester phosphodiesterase domain CJO35_05240 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CJO35_05245 IPR035384 Uncharacterized protein YhdX-like CJO35_05250 IPR023408 Mechanosensitive ion channel MscS domain superfamily CJO35_05250 IPR010920 LSM domain superfamily CJO35_05250 IPR006685 Mechanosensitive ion channel MscS CJO35_05250 IPR011066 Mechanosensitive ion channel MscS, C-terminal CJO35_05250 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CJO35_05250 IPR006686 Mechanosensitive ion channel MscS, conserved site CJO35_05255 IPR028628 Sirtuin, class U CJO35_05255 IPR029035 DHS-like NAD/FAD-binding domain superfamily CJO35_05255 IPR026590 Sirtuin family, catalytic core domain CJO35_05255 IPR003000 Sirtuin family CJO35_05255 IPR026591 Sirtuin, catalytic core small domain superfamily CJO35_05265 IPR002509 NodB homology domain CJO35_05265 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_05270 IPR005784 D-amino acid aminotransferase CJO35_05270 IPR018300 Aminotransferase, class IV, conserved site CJO35_05270 IPR036038 Aminotransferase-like, PLP-dependent enzymes CJO35_05270 IPR001544 Aminotransferase class IV CJO35_05275 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CJO35_05275 IPR004770 Na+/H+ antiporter NhaC CJO35_05280 IPR014718 Glycoside hydrolase-type carbohydrate-binding CJO35_05280 IPR011013 Galactose mutarotase-like domain superfamily CJO35_05280 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CJO35_05285 IPR032545 Protein of unknown function DUF4944 CJO35_05305 IPR006015 Universal stress protein A family CJO35_05305 IPR006016 UspA CJO35_05305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_05310 IPR003439 ABC transporter-like CJO35_05310 IPR039421 Type I protein exporter CJO35_05310 IPR017871 ABC transporter, conserved site CJO35_05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05310 IPR011527 ABC transporter type 1, transmembrane domain CJO35_05310 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_05310 IPR003593 AAA+ ATPase domain CJO35_05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05315 IPR003439 ABC transporter-like CJO35_05315 IPR039421 Type I protein exporter CJO35_05315 IPR017871 ABC transporter, conserved site CJO35_05315 IPR011527 ABC transporter type 1, transmembrane domain CJO35_05315 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_05315 IPR003593 AAA+ ATPase domain CJO35_05320 IPR016040 NAD(P)-binding domain CJO35_05320 IPR036291 NAD(P)-binding domain superfamily CJO35_05325 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CJO35_05325 IPR001448 Small acid-soluble spore protein, alpha/beta-type CJO35_05325 IPR038300 SASP, alpha/beta-type superfamily CJO35_05335 IPR003439 ABC transporter-like CJO35_05335 IPR008995 Molybdate/tungstate binding, C-terminal CJO35_05335 IPR003593 AAA+ ATPase domain CJO35_05335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05335 IPR040582 MalK, OB fold domain CJO35_05335 IPR017871 ABC transporter, conserved site CJO35_05335 IPR005116 Transport-associated OB, type 1 CJO35_05340 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CJO35_05340 IPR025736 PucR C-terminal helix-turn-helix domain CJO35_05345 IPR017263 Uncharacterised conserved protein UCP037692 CJO35_05350 IPR026838 Endospore coat-associated protein YheC/D CJO35_05355 IPR013815 ATP-grasp fold, subdomain 1 CJO35_05355 IPR026838 Endospore coat-associated protein YheC/D CJO35_05360 IPR007383 Protein of unknown function DUF445 CJO35_05360 IPR016991 Protein of unknown function UCP032178 CJO35_05365 IPR010368 Control of competence regulator ComK, YlbF/YmcA CJO35_05365 IPR023378 YheA/YmcA-like domain superfamily CJO35_05375 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_05375 IPR000150 Cof family CJO35_05375 IPR023214 HAD superfamily CJO35_05375 IPR036412 HAD-like superfamily CJO35_05380 IPR034505 Anaerobic coproporphyrinogen-III oxidase CJO35_05380 IPR006638 Elp3/MiaB/NifB CJO35_05380 IPR023404 Radical SAM, alpha/beta horseshoe CJO35_05380 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ CJO35_05380 IPR007197 Radical SAM CJO35_05385 IPR006153 Cation/H+ exchanger CJO35_05385 IPR038770 Sodium/solute symporter superfamily CJO35_05390 IPR006037 Regulator of K+ conductance, C-terminal CJO35_05390 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CJO35_05390 IPR026278 Potassium/proton antiporter subunit KhtT CJO35_05400 IPR001753 Enoyl-CoA hydratase/isomerase CJO35_05400 IPR029045 ClpP/crotonase-like domain superfamily CJO35_05400 IPR014748 Enoyl-CoA hydratase, C-terminal CJO35_05405 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_05405 IPR013026 Tetratricopeptide repeat-containing domain CJO35_05405 IPR019734 Tetratricopeptide repeat CJO35_05405 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_05415 IPR025544 YhzD-like protein CJO35_05420 IPR003593 AAA+ ATPase domain CJO35_05420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05420 IPR025302 Domain of unknown function DUF4162 CJO35_05420 IPR003439 ABC transporter-like CJO35_05420 IPR017871 ABC transporter, conserved site CJO35_05430 IPR014576 Predicted phosphoesterase, YhaO type CJO35_05430 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CJO35_05430 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_05430 IPR029052 Metallo-dependent phosphatase-like CJO35_05435 IPR038734 Uncharacterized protein YhaN, AAA domain CJO35_05435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05440 IPR003607 HD/PDEase domain CJO35_05440 IPR020873 3'-5' exoribonuclease YhaM CJO35_05440 IPR006674 HD domain CJO35_05445 IPR025428 Sporulation protein YhaL CJO35_05450 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CJO35_05450 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CJO35_05450 IPR027304 Trigger factor/SurA domain superfamily CJO35_05450 IPR023059 Foldase protein PrsA CJO35_05455 IPR010070 Sporulation protein YjcZ-like CJO35_05470 IPR021683 Putative zincin peptidase CJO35_05475 IPR035945 YhaI-like superfamily CJO35_05475 IPR015058 Protein of unknown function DUF1878 CJO35_05480 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_05480 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_05480 IPR023488 HTH-type transcriptional regulator Hpr CJO35_05480 IPR000835 MarR-type HTH domain CJO35_05480 IPR036390 Winged helix DNA-binding domain superfamily CJO35_05485 IPR036191 RRF superfamily CJO35_05485 IPR024623 Uncharacterised protein family YtxH CJO35_05495 IPR031360 Tryptophan transporter TrpP CJO35_05500 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_05500 IPR022278 Phosphoserine aminotransferase CJO35_05500 IPR000192 Aminotransferase class V domain CJO35_05500 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_05500 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJO35_05500 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_05505 IPR019808 Histidine triad, conserved site CJO35_05505 IPR011146 HIT-like domain CJO35_05505 IPR039384 HINT family CJO35_05505 IPR001310 Histidine triad (HIT) protein CJO35_05505 IPR036265 HIT-like superfamily CJO35_05515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05515 IPR003593 AAA+ ATPase domain CJO35_05515 IPR003439 ABC transporter-like CJO35_05520 IPR010288 Bacterial ABC transporter EcsB CJO35_05525 IPR024787 EcsC protein CJO35_05530 IPR017439 Amidohydrolase CJO35_05530 IPR002933 Peptidase M20 CJO35_05530 IPR011650 Peptidase M20, dimerisation domain CJO35_05530 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_05540 IPR007138 Antibiotic biosynthesis monooxygenase domain CJO35_05540 IPR011008 Dimeric alpha-beta barrel CJO35_05545 IPR036950 Penicillin binding protein transglycosylase domain CJO35_05545 IPR023346 Lysozyme-like domain superfamily CJO35_05545 IPR012338 Beta-lactamase/transpeptidase-like CJO35_05545 IPR001460 Penicillin-binding protein, transpeptidase CJO35_05545 IPR001264 Glycosyl transferase, family 51 CJO35_05550 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CJO35_05550 IPR038071 UROD/MetE-like superfamily CJO35_05550 IPR006361 Uroporphyrinogen decarboxylase HemE CJO35_05565 IPR009057 Homeobox-like domain superfamily CJO35_05565 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_05565 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal CJO35_05565 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_05565 IPR001647 DNA-binding HTH domain, TetR-type CJO35_05570 IPR023908 xxxLxxG heptad repeat CJO35_05570 IPR017500 Phage infection protein, YhgE, N-terminal CJO35_05570 IPR017501 Phage infection protein, YhgE, C-terminal CJO35_05575 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO35_05575 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CJO35_05575 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CJO35_05575 IPR016039 Thiolase-like CJO35_05580 IPR023367 Peptidase M42, domain 2 CJO35_05580 IPR008007 Peptidase M42 CJO35_05590 IPR018107 Sodium:dicarboxylate symporter, conserved site CJO35_05590 IPR033380 Glutamate-aspartate symport protein GltP/GltT CJO35_05590 IPR036458 Sodium:dicarboxylate symporter superfamily CJO35_05590 IPR001991 Sodium:dicarboxylate symporter CJO35_05595 IPR025432 YhfH-like protein CJO35_05600 IPR001279 Metallo-beta-lactamase CJO35_05600 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_05605 IPR004562 Lipoyltransferase/lipoate-protein ligase CJO35_05605 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CJO35_05605 IPR019491 Lipoate protein ligase, C-terminal CJO35_05610 IPR042099 AMP-dependent synthetase-like superfamily CJO35_05610 IPR000873 AMP-dependent synthetase/ligase CJO35_05610 IPR020459 AMP-binding CJO35_05610 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_05610 IPR020845 AMP-binding, conserved site CJO35_05620 IPR011051 RmlC-like cupin domain superfamily CJO35_05620 IPR014710 RmlC-like jelly roll fold CJO35_05620 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_05620 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_05620 IPR013096 Cupin 2, conserved barrel CJO35_05635 IPR032456 CAAX prenyl protease 1, N-terminal CJO35_05635 IPR001915 Peptidase M48 CJO35_05635 IPR027057 CAAX prenyl protease 1 CJO35_05645 IPR000620 EamA domain CJO35_05650 IPR002491 ABC transporter periplasmic binding domain CJO35_05655 IPR037294 ABC transporter, BtuC-like CJO35_05655 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_05660 IPR037294 ABC transporter, BtuC-like CJO35_05660 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_05665 IPR013078 Histidine phosphatase superfamily, clade-1 CJO35_05665 IPR029033 Histidine phosphatase superfamily CJO35_05665 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CJO35_05670 IPR009050 Globin-like superfamily CJO35_05670 IPR012292 Globin/Protoglobin CJO35_05670 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_05670 IPR039379 Protoglobin, globin sensor domain CJO35_05675 IPR006076 FAD dependent oxidoreductase CJO35_05675 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CJO35_05675 IPR005805 Rieske iron-sulphur protein, C-terminal CJO35_05675 IPR038010 YhfW, C-terminal Rieske domain CJO35_05675 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CJO35_05675 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_05680 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_05680 IPR036291 NAD(P)-binding domain superfamily CJO35_05680 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_05685 IPR014957 IDEAL domain CJO35_05685 IPR027393 Virus scaffolding protein, C-terminal CJO35_05690 IPR010461 Competence protein ComK CJO35_05700 IPR032816 SNARE associated Golgi protein CJO35_05700 IPR015414 Transmembrane protein TMEM64 CJO35_05705 IPR019758 Peptidase S26A, signal peptidase I, conserved site CJO35_05705 IPR000223 Peptidase S26A, signal peptidase I CJO35_05705 IPR019756 Peptidase S26A, signal peptidase I, serine active site CJO35_05705 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CJO35_05705 IPR019533 Peptidase S26 CJO35_05705 IPR036286 LexA/Signal peptidase-like superfamily CJO35_05710 IPR041909 Sbi, C3 binding domain IV CJO35_05710 IPR000209 Peptidase S8/S53 domain CJO35_05710 IPR036852 Peptidase S8/S53 domain superfamily CJO35_05710 IPR023827 Peptidase S8, subtilisin, Asp-active site CJO35_05710 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily CJO35_05710 IPR015500 Peptidase S8, subtilisin-related CJO35_05710 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_05710 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_05710 IPR034202 Subtilisin Carlsberg-like catalytic domain CJO35_05720 IPR041522 CdaR, GGDEF-like domain CJO35_05720 IPR012914 Purine catabolism PurC-like domain CJO35_05720 IPR025736 PucR C-terminal helix-turn-helix domain CJO35_05720 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CJO35_05730 IPR017593 Allantoinase CJO35_05730 IPR006680 Amidohydrolase-related CJO35_05730 IPR011059 Metal-dependent hydrolase, composite domain superfamily CJO35_05730 IPR032466 Metal-dependent hydrolase CJO35_05740 IPR008579 Domain of unknown function DUF861, cupin-3 CJO35_05740 IPR014710 RmlC-like jelly roll fold CJO35_05740 IPR013096 Cupin 2, conserved barrel CJO35_05740 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein CJO35_05740 IPR011051 RmlC-like cupin domain superfamily CJO35_05745 IPR003767 Malate/L-lactate dehydrogenase-like CJO35_05745 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily CJO35_05745 IPR017590 Ureidoglycolate dehydrogenase CJO35_05750 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily CJO35_05750 IPR017590 Ureidoglycolate dehydrogenase CJO35_05750 IPR003767 Malate/L-lactate dehydrogenase-like CJO35_05755 IPR003781 CoA-binding CJO35_05755 IPR016102 Succinyl-CoA synthetase-like CJO35_05755 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CJO35_05760 IPR024033 Uncharacterised domain superfamily, YlbE CJO35_05760 IPR009499 Protein of unknown function DUF1116 CJO35_05770 IPR036393 Acetylglutamate kinase-like superfamily CJO35_05770 IPR003964 Carbamate kinase CJO35_05770 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_05775 IPR036259 MFS transporter superfamily CJO35_05775 IPR023495 Sugar efflux transporter, putative CJO35_05775 IPR020846 Major facilitator superfamily domain CJO35_05775 IPR011701 Major facilitator superfamily CJO35_05785 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_05785 IPR019734 Tetratricopeptide repeat CJO35_05785 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_05785 IPR013026 Tetratricopeptide repeat-containing domain CJO35_05825 IPR019802 Glycoside hydrolase, family 4, conserved site CJO35_05825 IPR001088 Glycoside hydrolase, family 4 CJO35_05825 IPR022616 Glycosyl hydrolase, family 4, C-terminal CJO35_05825 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CJO35_05825 IPR036291 NAD(P)-binding domain superfamily CJO35_05830 IPR017516 AbrB duplication CJO35_05830 IPR007820 AbrB family CJO35_05835 IPR020256 Spore coat protein CotJA CJO35_05840 IPR024207 Spore coat assembly protein CotJB, domain CJO35_05840 IPR016571 Spore coat assembly protein CotJB CJO35_05845 IPR012347 Ferritin-like CJO35_05845 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain CJO35_05845 IPR009078 Ferritin-like superfamily CJO35_05845 IPR007760 Manganese catalase CJO35_05850 IPR000873 AMP-dependent synthetase/ligase CJO35_05850 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_05850 IPR020845 AMP-binding, conserved site CJO35_05855 IPR011701 Major facilitator superfamily CJO35_05855 IPR036259 MFS transporter superfamily CJO35_05855 IPR020846 Major facilitator superfamily domain CJO35_05865 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_05865 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_05865 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_05865 IPR013767 PAS fold CJO35_05865 IPR031967 PhoR, single Cache-like domain CJO35_05865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_05865 IPR005467 Histidine kinase domain CJO35_05865 IPR000014 PAS domain CJO35_05865 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_05865 IPR035965 PAS domain superfamily CJO35_05870 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_05870 IPR001789 Signal transduction response regulator, receiver domain CJO35_05870 IPR011006 CheY-like superfamily CJO35_05870 IPR039420 Transcriptional regulatory protein WalR-like CJO35_05870 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_05870 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_05875 IPR003251 Rubrerythrin CJO35_05875 IPR009078 Ferritin-like superfamily CJO35_05880 IPR005950 Molybdate ABC transporter, substrate-binding protein CJO35_05880 IPR041879 YvgL-like, substrate binding domain CJO35_05885 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_05885 IPR035906 MetI-like superfamily CJO35_05885 IPR011867 Molybdate ABC transporter, permease protein CJO35_05890 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CJO35_05890 IPR014017 UvrD-like DNA helicase, C-terminal CJO35_05890 IPR000212 DNA helicase, UvrD/REP type CJO35_05890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05890 IPR014140 DNA helicase subunit AddB CJO35_05890 IPR014016 UvrD-like helicase, ATP-binding domain CJO35_05895 IPR014152 DNA helicase subunit AddA CJO35_05895 IPR011335 Restriction endonuclease type II-like CJO35_05895 IPR014016 UvrD-like helicase, ATP-binding domain CJO35_05895 IPR011604 Exonuclease, phage-type/RecB, C-terminal CJO35_05895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05895 IPR014017 UvrD-like DNA helicase, C-terminal CJO35_05895 IPR034739 UvrD/AddA helicase, N-terminal CJO35_05895 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CJO35_05895 IPR000212 DNA helicase, UvrD/REP type CJO35_05900 IPR004593 Nuclease SbcCD subunit D CJO35_05900 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CJO35_05900 IPR029052 Metallo-dependent phosphatase-like CJO35_05900 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_05900 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CJO35_05905 IPR038729 Rad50/SbcC-type AAA domain CJO35_05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05910 IPR019618 Spore germination protein GerPA/GerPF CJO35_05915 IPR024496 Spore germination protein GerPE CJO35_05920 IPR017257 Spore germination protein GerPD, predicted CJO35_05925 IPR019673 Spore germination protein GerPC CJO35_05930 IPR024255 Spore germination GerPB CJO35_05935 IPR019618 Spore germination protein GerPA/GerPF CJO35_05940 IPR017259 Uncharacterised conserved protein UCP037672 CJO35_05945 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily CJO35_05945 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like CJO35_05950 IPR014867 Spore coat protein CotH CJO35_05960 IPR011234 Fumarylacetoacetase-like, C-terminal CJO35_05960 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CJO35_05965 IPR004881 Ribosome biogenesis GTPase RsgA CJO35_05965 IPR010914 RsgA GTPase domain CJO35_05965 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CJO35_05965 IPR012340 Nucleic acid-binding, OB-fold CJO35_05965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_05970 IPR010899 Protein of unknown function UPF0344 CJO35_05975 IPR024488 Protein of unknown function DUF2777 CJO35_05980 IPR006426 Asparagine synthase, glutamine-hydrolyzing CJO35_05980 IPR001962 Asparagine synthase CJO35_05980 IPR033738 Asparagine synthase, N-terminal domain CJO35_05980 IPR017932 Glutamine amidotransferase type 2 domain CJO35_05980 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_05985 IPR001905 Ammonium transporter CJO35_05985 IPR029020 Ammonium/urea transporter CJO35_05985 IPR024041 Ammonium transporter AmtB-like domain CJO35_05985 IPR018047 Ammonium transporter, conserved site CJO35_05990 IPR011322 Nitrogen regulatory PII-like, alpha/beta CJO35_05990 IPR002187 Nitrogen regulatory protein PII CJO35_05990 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_05990 IPR017918 Nitrogen regulatory protein PII, conserved site CJO35_05995 IPR002528 Multi antimicrobial extrusion protein CJO35_06000 IPR018062 HTH domain AraC-type, conserved site CJO35_06000 IPR018060 DNA binding HTH domain, AraC-type CJO35_06000 IPR003313 AraC-type arabinose-binding/dimerisation domain CJO35_06000 IPR009057 Homeobox-like domain superfamily CJO35_06000 IPR037923 Transcription regulator HTH-like CJO35_06010 IPR028082 Periplasmic binding protein-like I CJO35_06010 IPR000843 LacI-type HTH domain CJO35_06010 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_06015 IPR000683 Oxidoreductase, N-terminal CJO35_06015 IPR036291 NAD(P)-binding domain superfamily CJO35_06015 IPR004104 Oxidoreductase, C-terminal CJO35_06030 IPR004995 Bacillus/Clostridium Ger spore germination protein CJO35_06035 IPR001123 Amino acid exporter protein, LeuE-type CJO35_06040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_06040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_06040 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_06040 IPR000524 Transcription regulator HTH, GntR CJO35_06040 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_06040 IPR036390 Winged helix DNA-binding domain superfamily CJO35_06040 IPR004839 Aminotransferase, class I/classII CJO35_06045 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_06045 IPR005814 Aminotransferase class-III CJO35_06045 IPR004637 2,4-diaminobutyrate 4-transaminase CJO35_06045 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_06045 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_06050 IPR002129 Pyridoxal phosphate-dependent decarboxylase CJO35_06050 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_06050 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_06050 IPR021115 Pyridoxal-phosphate binding site CJO35_06055 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CJO35_06055 IPR022770 Ferric iron reductase FhuF domain CJO35_06055 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CJO35_06060 IPR016181 Acyl-CoA N-acyltransferase CJO35_06060 IPR019432 Siderophore biosynthesis protein, conserved domain CJO35_06065 IPR031043 Putative histamine N-monooxygenase CJO35_06065 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_06065 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CJO35_06070 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CJO35_06070 IPR022770 Ferric iron reductase FhuF domain CJO35_06070 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CJO35_06075 IPR016181 Acyl-CoA N-acyltransferase CJO35_06075 IPR039143 Glucosamine 6-phosphate N-acetyltransferase CJO35_06075 IPR000182 GNAT domain CJO35_06080 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_06080 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_06080 IPR036291 NAD(P)-binding domain superfamily CJO35_06085 IPR036390 Winged helix DNA-binding domain superfamily CJO35_06085 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_06085 IPR028349 Protein PafC CJO35_06085 IPR001034 DeoR-type HTH domain CJO35_06085 IPR013196 Helix-turn-helix, type 11 CJO35_06085 IPR026881 WYL domain CJO35_06090 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily CJO35_06090 IPR033706 Methionine synthase, B12-binding domain CJO35_06090 IPR036589 Homocysteine-binding domain superfamily CJO35_06090 IPR011005 Dihydropteroate synthase-like CJO35_06090 IPR036724 Cobalamin-binding domain superfamily CJO35_06090 IPR006158 Cobalamin (vitamin B12)-binding domain CJO35_06090 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CJO35_06090 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CJO35_06090 IPR000489 Pterin-binding domain CJO35_06090 IPR011822 Cobalamin-dependent methionine synthase CJO35_06090 IPR036594 Methionine synthase domain CJO35_06090 IPR003726 Homocysteine-binding domain CJO35_06095 IPR029041 FAD-linked oxidoreductase-like CJO35_06095 IPR003171 Methylenetetrahydrofolate reductase CJO35_06095 IPR036589 Homocysteine-binding domain superfamily CJO35_06095 IPR003726 Homocysteine-binding domain CJO35_06100 IPR036183 YajQ-like superfamily CJO35_06100 IPR035570 UPF0234, N-terminal CJO35_06100 IPR007551 Protein of unknown function DUF520 CJO35_06100 IPR035571 UPF0234-like, C-terminal CJO35_06105 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_06105 IPR012340 Nucleic acid-binding, OB-fold CJO35_06105 IPR040764 Conserved virulence factor B-like, winged helix domain CJO35_06105 IPR039566 Conserved virulence factor B, S1 domain CJO35_06105 IPR022967 RNA-binding domain, S1 CJO35_06105 IPR003029 S1 domain CJO35_06105 IPR014464 Conserved virulence factor B CJO35_06120 IPR003797 DegV CJO35_06125 IPR003740 Uncharacterised membrane protein YitT CJO35_06125 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_06125 IPR019264 Domain of unknown function DUF2179 CJO35_06130 IPR038144 Intracellular proteinase inhibitor CJO35_06130 IPR020481 Intracellular proteinase inhibitor BsuPI CJO35_06135 IPR001093 IMP dehydrogenase/GMP reductase CJO35_06135 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CJO35_06135 IPR005994 Guanosine monophosphate reductase, type2 CJO35_06135 IPR013785 Aldolase-type TIM barrel CJO35_06140 IPR024217 Protein of unknown function DUF3813 CJO35_06145 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_06145 IPR023214 HAD superfamily CJO35_06145 IPR036412 HAD-like superfamily CJO35_06145 IPR000150 Cof family CJO35_06150 IPR029058 Alpha/Beta hydrolase fold CJO35_06150 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CJO35_06155 IPR002744 MIP18 family-like CJO35_06155 IPR034904 Fe-S cluster assembly domain superfamily CJO35_06165 IPR000534 Semialdehyde dehydrogenase, NAD-binding CJO35_06165 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CJO35_06165 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CJO35_06165 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CJO35_06165 IPR036291 NAD(P)-binding domain superfamily CJO35_06170 IPR016117 ArgJ-like domain superfamily CJO35_06170 IPR042195 ArgJ beta chain, C-terminal domain CJO35_06170 IPR002813 Arginine biosynthesis protein ArgJ CJO35_06175 IPR004662 Acetylglutamate kinase family CJO35_06175 IPR036393 Acetylglutamate kinase-like superfamily CJO35_06175 IPR037528 Acetylglutamate kinase ArgB CJO35_06175 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_06180 IPR004636 Acetylornithine/Succinylornithine transaminase family CJO35_06180 IPR005814 Aminotransferase class-III CJO35_06180 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_06180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_06180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_06185 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CJO35_06185 IPR029062 Class I glutamine amidotransferase-like CJO35_06185 IPR006274 Carbamoyl-phosphate synthase, small subunit CJO35_06185 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CJO35_06185 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CJO35_06185 IPR017926 Glutamine amidotransferase CJO35_06190 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CJO35_06190 IPR006275 Carbamoyl-phosphate synthase, large subunit CJO35_06190 IPR011607 Methylglyoxal synthase-like domain CJO35_06190 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CJO35_06190 IPR013815 ATP-grasp fold, subdomain 1 CJO35_06190 IPR016185 Pre-ATP-grasp domain superfamily CJO35_06190 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CJO35_06190 IPR011761 ATP-grasp fold CJO35_06190 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CJO35_06195 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CJO35_06195 IPR002292 Ornithine/putrescine carbamoyltransferase CJO35_06195 IPR024904 Ornithine carbamoyltransferase CJO35_06195 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CJO35_06195 IPR006130 Aspartate/ornithine carbamoyltransferase CJO35_06195 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CJO35_06200 IPR003824 Undecaprenyl-diphosphatase UppP CJO35_06205 IPR025549 YjzC-like protein CJO35_06215 IPR029058 Alpha/Beta hydrolase fold CJO35_06225 IPR028082 Periplasmic binding protein-like I CJO35_06225 IPR003760 ABC transporter substrate-binding protein PnrA-like CJO35_06230 IPR024558 ComZ CJO35_06240 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJO35_06240 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CJO35_06240 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CJO35_06240 IPR016039 Thiolase-like CJO35_06245 IPR018201 Beta-ketoacyl synthase, active site CJO35_06245 IPR014031 Beta-ketoacyl synthase, C-terminal CJO35_06245 IPR000794 Beta-ketoacyl synthase CJO35_06245 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CJO35_06245 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CJO35_06245 IPR014030 Beta-ketoacyl synthase, N-terminal CJO35_06245 IPR016039 Thiolase-like CJO35_06250 IPR018728 Domain of unknown function DUF2268 CJO35_06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_06255 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_06255 IPR017871 ABC transporter, conserved site CJO35_06255 IPR003439 ABC transporter-like CJO35_06255 IPR003593 AAA+ ATPase domain CJO35_06260 IPR003439 ABC transporter-like CJO35_06260 IPR017871 ABC transporter, conserved site CJO35_06260 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_06260 IPR003593 AAA+ ATPase domain CJO35_06265 IPR000914 Solute-binding protein family 5 domain CJO35_06265 IPR039424 Solute-binding protein family 5 CJO35_06265 IPR030678 Peptide/nickel binding protein, MppA-type CJO35_06265 IPR023765 Solute-binding protein family 5, conserved site CJO35_06270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_06270 IPR035906 MetI-like superfamily CJO35_06275 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CJO35_06275 IPR035906 MetI-like superfamily CJO35_06275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_06285 IPR003382 Flavoprotein CJO35_06285 IPR036551 Flavin prenyltransferase-like CJO35_06295 IPR020909 UPF0736 CJO35_06300 IPR002306 Tryptophan-tRNA ligase CJO35_06300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_06300 IPR002305 Aminoacyl-tRNA synthetase, class Ic CJO35_06300 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_06300 IPR024109 Tryptophan-tRNA ligase, bacterial-type CJO35_06310 IPR000914 Solute-binding protein family 5 domain CJO35_06310 IPR030678 Peptide/nickel binding protein, MppA-type CJO35_06310 IPR039424 Solute-binding protein family 5 CJO35_06310 IPR023765 Solute-binding protein family 5, conserved site CJO35_06315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_06315 IPR035906 MetI-like superfamily CJO35_06320 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CJO35_06320 IPR035906 MetI-like superfamily CJO35_06320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_06325 IPR003593 AAA+ ATPase domain CJO35_06325 IPR017871 ABC transporter, conserved site CJO35_06325 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_06325 IPR003439 ABC transporter-like CJO35_06325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_06330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_06330 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_06330 IPR017871 ABC transporter, conserved site CJO35_06330 IPR003439 ABC transporter-like CJO35_06330 IPR003593 AAA+ ATPase domain CJO35_06335 IPR016181 Acyl-CoA N-acyltransferase CJO35_06335 IPR000182 GNAT domain CJO35_06340 IPR023731 Regulatory protein Spx CJO35_06340 IPR036249 Thioredoxin-like superfamily CJO35_06340 IPR006504 Transcriptional regulator Spx/MgsR CJO35_06340 IPR006660 Arsenate reductase-like CJO35_06345 IPR005496 Integral membrane protein TerC CJO35_06345 IPR022301 Integral membrane protein YjbE CJO35_06350 IPR008681 Negative regulator of genetic competence, MecA CJO35_06350 IPR038471 MecA, C-terminal domain superfamily CJO35_06365 IPR002823 Protein of unknown function DUF112, transmembrane CJO35_06370 IPR001789 Signal transduction response regulator, receiver domain CJO35_06370 IPR024187 Signal transduction response regulator, citrate/malate metabolism CJO35_06370 IPR011006 CheY-like superfamily CJO35_06370 IPR028141 Transcriptional regulator CJO35_06375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_06375 IPR005467 Histidine kinase domain CJO35_06375 IPR000014 PAS domain CJO35_06375 IPR035965 PAS domain superfamily CJO35_06375 IPR013767 PAS fold CJO35_06375 IPR033463 Single cache domain 3 CJO35_06375 IPR029151 Periplasmic sensor-like domain superfamily CJO35_06375 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CJO35_06375 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_06375 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_06375 IPR039506 SpoOB, alpha-helical domain CJO35_06380 IPR010330 Competence-induced protein CoiA-like CJO35_06380 IPR021176 Competence-induced protein CoiA CJO35_06385 IPR042088 Oligoendopeptidase F, C-terminal domain CJO35_06385 IPR004438 Peptidase M3B, oligoendopeptidase F CJO35_06385 IPR013647 Oligopeptidase F, N-terminal domain CJO35_06385 IPR001567 Peptidase M3A/M3B catalytic domain CJO35_06400 IPR001486 Truncated hemoglobin CJO35_06400 IPR009050 Globin-like superfamily CJO35_06400 IPR012292 Globin/Protoglobin CJO35_06400 IPR019795 Globin, bacterial-like, conserved site CJO35_06405 IPR023346 Lysozyme-like domain superfamily CJO35_06405 IPR000189 Prokaryotic transglycosylase, active site CJO35_06405 IPR008258 Transglycosylase SLT domain 1 CJO35_06410 IPR033469 CYTH-like domain superfamily CJO35_06410 IPR023577 CYTH domain CJO35_06410 IPR009195 Uncharacterised protein family YjbK CJO35_06415 IPR020908 Uncharacterised protein family UPF0738 CJO35_06420 IPR007685 RelA/SpoT CJO35_06425 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CJO35_06425 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CJO35_06425 IPR002504 NAD kinase CJO35_06425 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CJO35_06430 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CJO35_06430 IPR002942 RNA-binding S4 domain CJO35_06430 IPR020103 Pseudouridine synthase, catalytic domain superfamily CJO35_06430 IPR006225 Pseudouridine synthase, RluC/RluD CJO35_06430 IPR006145 Pseudouridine synthase, RsuA/RluA CJO35_06435 IPR029052 Metallo-dependent phosphatase-like CJO35_06435 IPR041780 PrpE-like, metallophosphatase domain CJO35_06435 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_06435 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE CJO35_06435 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase CJO35_06445 IPR006037 Regulator of K+ conductance, C-terminal CJO35_06445 IPR036291 NAD(P)-binding domain superfamily CJO35_06445 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CJO35_06445 IPR003148 Regulator of K+ conductance, N-terminal CJO35_06445 IPR006153 Cation/H+ exchanger CJO35_06445 IPR038770 Sodium/solute symporter superfamily CJO35_06450 IPR027574 Thiaminase II CJO35_06450 IPR004305 Thiaminase-2/PQQC CJO35_06450 IPR016084 Haem oxygenase-like, multi-helical CJO35_06455 IPR036206 Thiamin phosphate synthase superfamily CJO35_06455 IPR022998 Thiamine phosphate synthase/TenI CJO35_06455 IPR013785 Aldolase-type TIM barrel CJO35_06460 IPR006076 FAD dependent oxidoreductase CJO35_06460 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_06460 IPR012727 Glycine oxidase ThiO CJO35_06465 IPR010035 ThiS, thiamine-biosynthesis CJO35_06465 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CJO35_06465 IPR012675 Beta-grasp domain superfamily CJO35_06465 IPR003749 Sulfur carrier ThiS/MoaD-like CJO35_06470 IPR008867 Thiazole synthase CJO35_06470 IPR013785 Aldolase-type TIM barrel CJO35_06470 IPR033983 Thiazole synthase ThiG CJO35_06475 IPR035985 Ubiquitin-activating enzyme CJO35_06475 IPR000594 THIF-type NAD/FAD binding fold CJO35_06480 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CJO35_06480 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CJO35_06480 IPR029056 Ribokinase-like CJO35_06485 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_06485 IPR036291 NAD(P)-binding domain superfamily CJO35_06485 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CJO35_06490 IPR025439 Spore coat protein CotO CJO35_06495 IPR019593 Spore coat protein Z/Y CJO35_06500 IPR019593 Spore coat protein Z/Y CJO35_06505 IPR011428 Spore coat protein X/V CJO35_06515 IPR011428 Spore coat protein X/V CJO35_06520 IPR010773 Mycobacterium phage PG1, Gp7 CJO35_06535 IPR025942 Stage VI sporulation protein F CJO35_06540 IPR034739 UvrD/AddA helicase, N-terminal CJO35_06540 IPR014016 UvrD-like helicase, ATP-binding domain CJO35_06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_06540 IPR000212 DNA helicase, UvrD/REP type CJO35_06540 IPR014017 UvrD-like DNA helicase, C-terminal CJO35_06540 IPR013986 DExx box DNA helicase domain superfamily CJO35_06550 IPR032816 SNARE associated Golgi protein CJO35_06555 IPR016040 NAD(P)-binding domain CJO35_06555 IPR036291 NAD(P)-binding domain superfamily CJO35_06555 IPR005886 UDP-glucose 4-epimerase CJO35_06560 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CJO35_06560 IPR005835 Nucleotidyl transferase domain CJO35_06560 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_06565 IPR007267 GtrA-like protein CJO35_06570 IPR000182 GNAT domain CJO35_06570 IPR016181 Acyl-CoA N-acyltransferase CJO35_06570 IPR039143 Glucosamine 6-phosphate N-acetyltransferase CJO35_06575 IPR022932 Putative phosphoesterase YjcG CJO35_06575 IPR009097 Cyclic phosphodiesterase CJO35_06580 IPR000801 Putative esterase CJO35_06580 IPR029058 Alpha/Beta hydrolase fold CJO35_06600 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CJO35_06600 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_06600 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_06600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_06605 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CJO35_06605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_06605 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_06605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_06630 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase CJO35_06630 IPR006710 Glycoside hydrolase, family 43 CJO35_06630 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_06650 IPR001451 Hexapeptide repeat CJO35_06650 IPR011004 Trimeric LpxA-like superfamily CJO35_06650 IPR024688 Maltose/galactoside acetyltransferase CJO35_06650 IPR018357 Hexapeptide transferase, conserved site CJO35_06660 IPR000847 Transcription regulator HTH, LysR CJO35_06660 IPR005119 LysR, substrate-binding CJO35_06660 IPR036390 Winged helix DNA-binding domain superfamily CJO35_06660 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_06665 IPR008254 Flavodoxin/nitric oxide synthase CJO35_06665 IPR029039 Flavoprotein-like superfamily CJO35_06665 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CJO35_06665 IPR001433 Oxidoreductase FAD/NAD(P)-binding CJO35_06665 IPR017938 Riboflavin synthase-like beta-barrel CJO35_06665 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CJO35_06665 IPR001094 Flavodoxin-like CJO35_06665 IPR017927 FAD-binding domain, ferredoxin reductase-type CJO35_06665 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CJO35_06665 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CJO35_06665 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CJO35_06670 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CJO35_06670 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CJO35_06670 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CJO35_06670 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CJO35_06670 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CJO35_06675 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_06675 IPR005119 LysR, substrate-binding CJO35_06675 IPR000847 Transcription regulator HTH, LysR CJO35_06675 IPR036390 Winged helix DNA-binding domain superfamily CJO35_06680 IPR000620 EamA domain CJO35_06685 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_06685 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_06685 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_06690 IPR031841 DL-endopeptidase inhibitor IseA CJO35_06695 IPR036908 RlpA-like domain superfamily CJO35_06695 IPR010611 3D domain CJO35_06695 IPR036779 LysM domain superfamily CJO35_06695 IPR018392 LysM domain CJO35_06700 IPR036259 MFS transporter superfamily CJO35_06700 IPR011701 Major facilitator superfamily CJO35_06700 IPR004638 Drug resistance transporter EmrB-like CJO35_06700 IPR020846 Major facilitator superfamily domain CJO35_06705 IPR009057 Homeobox-like domain superfamily CJO35_06705 IPR001647 DNA-binding HTH domain, TetR-type CJO35_06705 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_06720 IPR036170 Probable antitoxin YezG superfamily CJO35_06720 IPR006728 Protein of unknown function DUF600 CJO35_06730 IPR008585 Poly-gamma-glutamate hydrolase CJO35_06730 IPR038128 Poly-gamma-glutamate hydrolase superfamily CJO35_06735 IPR010359 IrrE N-terminal-like domain CJO35_06740 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_06740 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_06755 IPR036390 Winged helix DNA-binding domain superfamily CJO35_06760 IPR003593 AAA+ ATPase domain CJO35_06760 IPR002611 IstB-like ATP-binding protein CJO35_06760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_06770 IPR035530 Phage-like element PBSX protein XtrA CJO35_06775 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_06775 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_06775 IPR014284 RNA polymerase sigma-70 like domain CJO35_06775 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_06780 IPR018925 Phage terminase small subunit CJO35_06780 IPR038713 Terminase small subunit, N-terminal domain superfamily CJO35_06780 IPR005335 Terminase small subunit CJO35_06785 IPR006437 Bacteriophage terminase, large subunit CJO35_06785 IPR035413 Phage terminase large subunit, C-terminal CJO35_06785 IPR035412 Phage terminase large subunit, N-terminal CJO35_06790 IPR016753 Phage portal protein PBSX family, Firmicutes CJO35_06790 IPR006430 Phage portal protein PBSX family CJO35_06790 IPR006944 Bacteriophage/Gene transfer agent portal protein CJO35_06795 IPR027924 Phage-like element PBSX protein, XkdF CJO35_06800 IPR024455 Phage capsid CJO35_06805 IPR013514 Protein of unknown function DUF3199, YqbG CJO35_06805 IPR036558 YqbG-like superfamily CJO35_06810 IPR038667 XkdH-like superfamily CJO35_06810 IPR024556 Protein of unknown function DUF3599 CJO35_06815 IPR010064 Bacteriophage HK97-gp10, putative tail-component CJO35_06830 IPR035326 Phage tail sheath protein, beta-sandwich domain CJO35_06830 IPR020287 Tail sheath protein, C-terminal domain CJO35_06830 IPR035089 Tail sheath protein, subtilisin-like domain CJO35_06835 IPR038628 XkdM-like superfamily CJO35_06835 IPR018989 Phage tail tube protein CJO35_06840 IPR038559 Clostridium phage phiCD119, XkdN superfamily CJO35_06840 IPR014986 Clostridium phage phiCD119, XkdN CJO35_06855 IPR036779 LysM domain superfamily CJO35_06855 IPR018392 LysM domain CJO35_06865 IPR022555 Protein of unknown function, DUF2577 CJO35_06870 IPR020288 Protein of unknown function DUF2634 CJO35_06875 IPR006949 Baseplate protein J-like CJO35_06880 IPR018755 Bacteriophage Mu-like, Gp48 CJO35_06890 IPR008983 Tumour necrosis factor-like domain superfamily CJO35_06900 IPR019715 Haemolysin XhlA CJO35_06905 IPR006479 Holin CJO35_06910 IPR036365 PGBD-like superfamily CJO35_06910 IPR036366 PGBD superfamily CJO35_06910 IPR002477 Peptidoglycan binding-like CJO35_06910 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CJO35_06910 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CJO35_06915 IPR036390 Winged helix DNA-binding domain superfamily CJO35_06915 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_06915 IPR011711 GntR, C-terminal CJO35_06915 IPR000524 Transcription regulator HTH, GntR CJO35_06915 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_06920 IPR013149 Alcohol dehydrogenase, C-terminal CJO35_06920 IPR013154 Alcohol dehydrogenase, N-terminal CJO35_06920 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CJO35_06920 IPR011032 GroES-like superfamily CJO35_06920 IPR036291 NAD(P)-binding domain superfamily CJO35_06920 IPR020843 Polyketide synthase, enoylreductase domain CJO35_06925 IPR036237 Xylose isomerase-like superfamily CJO35_06925 IPR004628 Mannonate dehydratase CJO35_06930 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_06930 IPR036291 NAD(P)-binding domain superfamily CJO35_06930 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_06935 IPR013149 Alcohol dehydrogenase, C-terminal CJO35_06935 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CJO35_06935 IPR011032 GroES-like superfamily CJO35_06935 IPR013154 Alcohol dehydrogenase, N-terminal CJO35_06935 IPR036291 NAD(P)-binding domain superfamily CJO35_06935 IPR020843 Polyketide synthase, enoylreductase domain CJO35_06940 IPR000849 Sugar phosphate transporter CJO35_06940 IPR036259 MFS transporter superfamily CJO35_06940 IPR020846 Major facilitator superfamily domain CJO35_06940 IPR011701 Major facilitator superfamily CJO35_06945 IPR025897 Antitoxin SpoIISB CJO35_06950 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system CJO35_06955 IPR001204 Phosphate transporter CJO35_06960 IPR038078 PhoU-like domain superfamily CJO35_06960 IPR018445 Putative phosphate transport regulator CJO35_06965 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_06965 IPR000101 Gamma-glutamyltranspeptidase CJO35_06970 IPR006938 Protein of unknown function DUF624 CJO35_06975 IPR033479 Double Cache domain 1 CJO35_06975 IPR010559 Signal transduction histidine kinase, internal region CJO35_06975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_06975 IPR005467 Histidine kinase domain CJO35_06975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_06975 IPR003660 HAMP domain CJO35_06975 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_06980 IPR001789 Signal transduction response regulator, receiver domain CJO35_06980 IPR018060 DNA binding HTH domain, AraC-type CJO35_06980 IPR009057 Homeobox-like domain superfamily CJO35_06980 IPR011006 CheY-like superfamily CJO35_06985 IPR006059 Bacterial extracellular solute-binding protein CJO35_06990 IPR035906 MetI-like superfamily CJO35_06990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_06995 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_06995 IPR035906 MetI-like superfamily CJO35_07000 IPR008928 Six-hairpin glycosidase superfamily CJO35_07000 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_07000 IPR010905 Glycosyl hydrolase, family 88 CJO35_07005 IPR009057 Homeobox-like domain superfamily CJO35_07005 IPR018060 DNA binding HTH domain, AraC-type CJO35_07005 IPR018062 HTH domain AraC-type, conserved site CJO35_07010 IPR036514 SGNH hydrolase superfamily CJO35_07010 IPR013830 SGNH hydrolase-type esterase domain CJO35_07010 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like CJO35_07015 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_07015 IPR015305 Protein of unknown function DUF1961 CJO35_07020 IPR006938 Protein of unknown function DUF624 CJO35_07025 IPR013783 Immunoglobulin-like fold CJO35_07025 IPR034641 Polysaccharide lyase family 11 CJO35_07025 IPR041624 Rhamnogalacturonan I lyase beta-sheet domain CJO35_07035 IPR036514 SGNH hydrolase superfamily CJO35_07035 IPR013830 SGNH hydrolase-type esterase domain CJO35_07035 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like CJO35_07040 IPR034641 Polysaccharide lyase family 11 CJO35_07040 IPR041624 Rhamnogalacturonan I lyase beta-sheet domain CJO35_07040 IPR013783 Immunoglobulin-like fold CJO35_07040 IPR013517 FG-GAP repeat CJO35_07045 IPR036812 NADP-dependent oxidoreductase domain superfamily CJO35_07045 IPR023210 NADP-dependent oxidoreductase domain CJO35_07050 IPR036514 SGNH hydrolase superfamily CJO35_07050 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like CJO35_07050 IPR001087 GDSL lipase/esterase CJO35_07055 IPR013780 Glycosyl hydrolase, all-beta CJO35_07055 IPR013529 Glycoside hydrolase, family 42, N-terminal CJO35_07055 IPR003476 Glycoside hydrolase, family 42 CJO35_07055 IPR013739 Beta-galactosidase C-terminal CJO35_07055 IPR017853 Glycoside hydrolase superfamily CJO35_07055 IPR029062 Class I glutamine amidotransferase-like CJO35_07055 IPR013738 Beta-galactosidase trimerisation CJO35_07065 IPR006059 Bacterial extracellular solute-binding protein CJO35_07070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_07070 IPR035906 MetI-like superfamily CJO35_07075 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_07075 IPR035906 MetI-like superfamily CJO35_07080 IPR002293 Amino acid/polyamine transporter I CJO35_07085 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_07085 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_07085 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_07095 IPR036034 PDZ superfamily CJO35_07095 IPR009003 Peptidase S1, PA clan CJO35_07095 IPR001940 Peptidase S1C CJO35_07095 IPR001478 PDZ domain CJO35_07100 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_07100 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CJO35_07100 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CJO35_07100 IPR000304 Pyrroline-5-carboxylate reductase CJO35_07100 IPR036291 NAD(P)-binding domain superfamily CJO35_07105 IPR036177 Peptidase M55, D-aminopeptidase superfamily CJO35_07105 IPR033824 D-aminopeptidase DppA CJO35_07105 IPR007035 Peptidase M55, D-aminopeptidase CJO35_07105 IPR027476 D-aminopeptidase, N-terminal CJO35_07110 IPR035906 MetI-like superfamily CJO35_07110 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_07115 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CJO35_07115 IPR035906 MetI-like superfamily CJO35_07115 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_07120 IPR003593 AAA+ ATPase domain CJO35_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_07120 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_07120 IPR003439 ABC transporter-like CJO35_07120 IPR017871 ABC transporter, conserved site CJO35_07125 IPR023765 Solute-binding protein family 5, conserved site CJO35_07125 IPR000914 Solute-binding protein family 5 domain CJO35_07125 IPR030678 Peptide/nickel binding protein, MppA-type CJO35_07125 IPR039424 Solute-binding protein family 5 CJO35_07130 IPR040449 LD-carboxypeptidase, N-terminal CJO35_07130 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal CJO35_07130 IPR029062 Class I glutamine amidotransferase-like CJO35_07130 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily CJO35_07130 IPR003507 Peptidase family S66 CJO35_07130 IPR040921 LD-carboxypeptidase, C-terminal CJO35_07135 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CJO35_07135 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CJO35_07135 IPR029065 Enolase C-terminal domain-like CJO35_07135 IPR029017 Enolase-like, N-terminal CJO35_07135 IPR036849 Enolase-like, C-terminal domain superfamily CJO35_07135 IPR034603 Dipeptide epimerase CJO35_07140 IPR038765 Papain-like cysteine peptidase superfamily CJO35_07140 IPR000064 Endopeptidase, NLPC/P60 domain CJO35_07145 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_07145 IPR017871 ABC transporter, conserved site CJO35_07145 IPR003439 ABC transporter-like CJO35_07145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_07145 IPR003593 AAA+ ATPase domain CJO35_07155 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CJO35_07155 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CJO35_07155 IPR029069 HotDog domain superfamily CJO35_07155 IPR006683 Thioesterase domain CJO35_07190 IPR000390 Small multidrug resistance protein family CJO35_07195 IPR000390 Small multidrug resistance protein family CJO35_07200 IPR002912 ACT domain CJO35_07200 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CJO35_07200 IPR004810 Formyltetrahydrofolate deformylase CJO35_07200 IPR002376 Formyl transferase, N-terminal CJO35_07200 IPR036477 Formyl transferase, N-terminal domain superfamily CJO35_07205 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_07205 IPR036974 PUA domain superfamily CJO35_07205 IPR015947 PUA-like superfamily CJO35_07205 IPR011529 Glutamate 5-kinase CJO35_07205 IPR002478 PUA domain CJO35_07205 IPR019797 Glutamate 5-kinase, conserved site CJO35_07205 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CJO35_07205 IPR001057 Glutamate/acetylglutamate kinase CJO35_07205 IPR036393 Acetylglutamate kinase-like superfamily CJO35_07205 IPR041739 Glutamate-5-kinase domain CJO35_07210 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_07210 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_07210 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_07210 IPR015590 Aldehyde dehydrogenase domain CJO35_07210 IPR000965 GPR domain CJO35_07210 IPR012134 Glutamate-5-semialdehyde dehydrogenase CJO35_07210 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CJO35_07215 IPR003718 OsmC/Ohr family CJO35_07215 IPR036102 OsmC/Ohr superfamily CJO35_07215 IPR019953 Organic hydroperoxide resistance protein famiy CJO35_07215 IPR015946 K homology domain-like, alpha/beta CJO35_07220 IPR000835 MarR-type HTH domain CJO35_07220 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_07220 IPR036390 Winged helix DNA-binding domain superfamily CJO35_07225 IPR036102 OsmC/Ohr superfamily CJO35_07225 IPR003718 OsmC/Ohr family CJO35_07225 IPR019953 Organic hydroperoxide resistance protein famiy CJO35_07225 IPR015946 K homology domain-like, alpha/beta CJO35_07235 IPR016192 APOBEC/CMP deaminase, zinc-binding CJO35_07235 IPR002125 Cytidine and deoxycytidylate deaminase domain CJO35_07235 IPR016193 Cytidine deaminase-like CJO35_07240 IPR029033 Histidine phosphatase superfamily CJO35_07240 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CJO35_07240 IPR023086 Phosphoglycerate mutase, GpmB, probable CJO35_07240 IPR013078 Histidine phosphatase superfamily, clade-1 CJO35_07255 IPR038071 UROD/MetE-like superfamily CJO35_07255 IPR006276 Cobalamin-independent methionine synthase CJO35_07255 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CJO35_07255 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CJO35_07260 IPR023827 Peptidase S8, subtilisin, Asp-active site CJO35_07260 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_07260 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_07260 IPR015500 Peptidase S8, subtilisin-related CJO35_07260 IPR034202 Subtilisin Carlsberg-like catalytic domain CJO35_07260 IPR036852 Peptidase S8/S53 domain superfamily CJO35_07260 IPR000209 Peptidase S8/S53 domain CJO35_07265 IPR022608 Transcription regulator SplA CJO35_07270 IPR000644 CBS domain CJO35_07270 IPR038048 Magnesium transporter MgtE, transmembrane domain CJO35_07270 IPR006669 Magnesium transporter MgtE CJO35_07270 IPR006667 SLC41 divalent cation transporters, integral membrane domain CJO35_07270 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CJO35_07270 IPR038076 MgtE, N-terminal domain superfamily CJO35_07270 IPR006668 Magnesium transporter, MgtE intracellular domain CJO35_07285 IPR010359 IrrE N-terminal-like domain CJO35_07295 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_07295 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_07320 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_07320 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_07325 IPR020278 Uncharacterized protein YqaH-like CJO35_07345 IPR006343 DnaD domain CJO35_07345 IPR034829 DnaD-like domain superfamily CJO35_07350 IPR002611 IstB-like ATP-binding protein CJO35_07350 IPR003593 AAA+ ATPase domain CJO35_07350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_07370 IPR035530 Phage-like element PBSX protein XtrA CJO35_07440 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_07450 IPR018925 Phage terminase small subunit CJO35_07455 IPR035412 Phage terminase large subunit, N-terminal CJO35_07455 IPR006437 Bacteriophage terminase, large subunit CJO35_07455 IPR035413 Phage terminase large subunit, C-terminal CJO35_07560 IPR019715 Haemolysin XhlA CJO35_07565 IPR006479 Holin CJO35_07570 IPR002053 Glycoside hydrolase, family 25 CJO35_07570 IPR008270 Glycoside hydrolase, family 25, active site CJO35_07570 IPR018077 Glycoside hydrolase, family 25 subgroup CJO35_07570 IPR017853 Glycoside hydrolase superfamily CJO35_07570 IPR003646 SH3-like domain, bacterial-type CJO35_07575 IPR014710 RmlC-like jelly roll fold CJO35_07575 IPR013096 Cupin 2, conserved barrel CJO35_07575 IPR011051 RmlC-like cupin domain superfamily CJO35_07580 IPR009078 Ferritin-like superfamily CJO35_07580 IPR003251 Rubrerythrin CJO35_07585 IPR007353 Protein of unknown function DUF421 CJO35_07585 IPR023090 UPF0702, alpha/beta domain superfamily CJO35_07590 IPR000551 MerR-type HTH domain CJO35_07590 IPR009061 Putative DNA-binding domain superfamily CJO35_07605 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_07605 IPR036390 Winged helix DNA-binding domain superfamily CJO35_07605 IPR000835 MarR-type HTH domain CJO35_07605 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_07610 IPR014143 DNA ligase D CJO35_07610 IPR014145 DNA ligase D, polymerase domain CJO35_07610 IPR033652 LigD polymerase domain, type 3 CJO35_07610 IPR012310 DNA ligase, ATP-dependent, central CJO35_07610 IPR014146 DNA ligase D, ligase domain CJO35_07615 IPR016194 SPOC-like, C-terminal domain superfamily CJO35_07615 IPR006164 Ku70/Ku80 beta-barrel domain CJO35_07615 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CJO35_07620 IPR029787 Nucleotide cyclase CJO35_07620 IPR035965 PAS domain superfamily CJO35_07620 IPR035919 EAL domain superfamily CJO35_07620 IPR001633 EAL domain CJO35_07620 IPR005330 MHYT domain CJO35_07620 IPR000160 GGDEF domain CJO35_07625 IPR032816 SNARE associated Golgi protein CJO35_07630 IPR022493 Integral membrane YkoY CJO35_07630 IPR036259 MFS transporter superfamily CJO35_07630 IPR005496 Integral membrane protein TerC CJO35_07635 IPR007627 RNA polymerase sigma-70 region 2 CJO35_07635 IPR013325 RNA polymerase sigma factor, region 2 CJO35_07635 IPR014244 RNA polymerase sigma-I type CJO35_07635 IPR014284 RNA polymerase sigma-70 like domain CJO35_07640 IPR024449 Anti-sigma factor RsgI, N-terminal CJO35_07645 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CJO35_07645 IPR001448 Small acid-soluble spore protein, alpha/beta-type CJO35_07645 IPR038300 SASP, alpha/beta-type superfamily CJO35_07650 IPR014975 Protein of unknown function DUF1836 CJO35_07655 IPR022919 Peptidase M48, protease HtpX, putative CJO35_07655 IPR001915 Peptidase M48 CJO35_07660 IPR003445 Cation transporter CJO35_07665 IPR005311 Penicillin-binding protein, dimerisation domain CJO35_07665 IPR032710 NTF2-like domain superfamily CJO35_07665 IPR012338 Beta-lactamase/transpeptidase-like CJO35_07665 IPR007887 NTF2-like N-terminal transpeptidase CJO35_07665 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CJO35_07665 IPR001460 Penicillin-binding protein, transpeptidase CJO35_07680 IPR002656 Acyltransferase 3 CJO35_07685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_07685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_07685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_07685 IPR005467 Histidine kinase domain CJO35_07685 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_07685 IPR013767 PAS fold CJO35_07685 IPR000014 PAS domain CJO35_07685 IPR035965 PAS domain superfamily CJO35_07685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_07690 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CJO35_07690 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CJO35_07690 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CJO35_07690 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CJO35_07690 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CJO35_07690 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CJO35_07690 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_07700 IPR009212 Methylthioribose kinase CJO35_07700 IPR011009 Protein kinase-like domain superfamily CJO35_07700 IPR002575 Aminoglycoside phosphotransferase CJO35_07705 IPR036526 Carbon-nitrogen hydrolase superfamily CJO35_07705 IPR003010 Carbon-nitrogen hydrolase CJO35_07710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_07710 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_07710 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_07710 IPR004839 Aminotransferase, class I/classII CJO35_07715 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal CJO35_07715 IPR036422 RuBisCO large subunit, N-terminal domain superfamily CJO35_07715 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase CJO35_07715 IPR033966 RuBisCO CJO35_07715 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal CJO35_07715 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily CJO35_07720 IPR006384 Pyridoxal phosphate phosphatase-related CJO35_07720 IPR017714 Methylthioribulose-1-phosphate dehydratase CJO35_07720 IPR023214 HAD superfamily CJO35_07720 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase CJO35_07720 IPR036412 HAD-like superfamily CJO35_07720 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CJO35_07720 IPR001303 Class II aldolase/adducin N-terminal CJO35_07725 IPR014710 RmlC-like jelly roll fold CJO35_07725 IPR004313 Acireductone dioxygenase ARD family CJO35_07725 IPR023956 Acireductone dioxygenase ARD, bacteria CJO35_07725 IPR011051 RmlC-like cupin domain superfamily CJO35_07730 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_07730 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_07730 IPR022858 Metallothiol transferase FosB CJO35_07730 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_07735 IPR010652 Domain of unknown function DUF1232 CJO35_07745 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_07745 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_07745 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_07745 IPR005467 Histidine kinase domain CJO35_07745 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_07745 IPR033479 Double Cache domain 1 CJO35_07745 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_07745 IPR029151 Periplasmic sensor-like domain superfamily CJO35_07750 IPR000835 MarR-type HTH domain CJO35_07750 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_07750 IPR036390 Winged helix DNA-binding domain superfamily CJO35_07750 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_07755 IPR025713 Motility protein B, N-terminal domain CJO35_07755 IPR006665 OmpA-like domain CJO35_07755 IPR036737 OmpA-like domain superfamily CJO35_07760 IPR002898 MotA/TolQ/ExbB proton channel CJO35_07760 IPR000540 Flagellar motor protein MotA, conserved site CJO35_07765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_07765 IPR001943 UVR domain CJO35_07765 IPR003593 AAA+ ATPase domain CJO35_07765 IPR041546 ClpA/ClpB, AAA lid domain CJO35_07765 IPR028299 ClpA/B, conserved site 2 CJO35_07765 IPR003959 ATPase, AAA-type, core CJO35_07765 IPR018368 ClpA/B, conserved site 1 CJO35_07765 IPR001270 ClpA/B family CJO35_07765 IPR019489 Clp ATPase, C-terminal CJO35_07770 IPR038728 Uncharacterized membrane protein YkvI CJO35_07775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_07775 IPR018317 Queuosine biosynthesis protein QueC CJO35_07780 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CJO35_07780 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CJO35_07785 IPR017742 7-carboxy-7-deazaguanine synthase CJO35_07785 IPR007197 Radical SAM CJO35_07785 IPR013785 Aldolase-type TIM barrel CJO35_07785 IPR024924 7-carboxy-7-deazaguanine synthase-like CJO35_07790 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 CJO35_07790 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CJO35_07800 IPR008535 Protein of unknown function DUF817 CJO35_07805 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_07805 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_07810 IPR021354 Protein of unknown function DUF2975 CJO35_07835 IPR018690 Protein of unknown function DUF2187 CJO35_07845 IPR011105 Cell wall hydrolase, SleB CJO35_07845 IPR042047 Cell wall hydrolase SleB, domain 1 CJO35_07850 IPR002797 Polysaccharide biosynthesis protein CJO35_07850 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CJO35_07855 IPR013766 Thioredoxin domain CJO35_07855 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CJO35_07855 IPR017937 Thioredoxin, conserved site CJO35_07855 IPR036249 Thioredoxin-like superfamily CJO35_07860 IPR023299 P-type ATPase, cytoplasmic domain N CJO35_07860 IPR001757 P-type ATPase CJO35_07860 IPR008250 P-type ATPase, A domain superfamily CJO35_07860 IPR027256 P-type ATPase, subfamily IB CJO35_07860 IPR023214 HAD superfamily CJO35_07860 IPR036412 HAD-like superfamily CJO35_07860 IPR018303 P-type ATPase, phosphorylation site CJO35_07860 IPR023298 P-type ATPase, transmembrane domain superfamily CJO35_07865 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CJO35_07865 IPR036005 Creatinase/aminopeptidase-like CJO35_07865 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CJO35_07865 IPR000587 Creatinase, N-terminal CJO35_07865 IPR000994 Peptidase M24 CJO35_07865 IPR001714 Peptidase M24, methionine aminopeptidase CJO35_07875 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_07875 IPR000843 LacI-type HTH domain CJO35_07875 IPR028082 Periplasmic binding protein-like I CJO35_07875 IPR001761 Periplasmic binding protein/LacI sugar binding domain CJO35_07880 IPR001550 Transcription antiterminator, conserved site CJO35_07880 IPR036634 PRD domain superfamily CJO35_07880 IPR011608 PRD domain CJO35_07880 IPR036650 CAT RNA-binding domain superfamily CJO35_07880 IPR004341 CAT RNA-binding domain CJO35_07885 IPR011055 Duplicated hybrid motif CJO35_07885 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_07885 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CJO35_07885 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CJO35_07885 IPR003352 Phosphotransferase system, EIIC CJO35_07885 IPR011299 PTS system glucose-specific IIBC component CJO35_07885 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_07885 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_07885 IPR036878 Glucose permease domain IIB CJO35_07890 IPR000032 Phosphocarrier protein HPr-like CJO35_07890 IPR035895 HPr-like superfamily CJO35_07890 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CJO35_07890 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CJO35_07895 IPR008279 PEP-utilising enzyme, mobile domain CJO35_07895 IPR018274 PEP-utilising enzyme, active site CJO35_07895 IPR000121 PEP-utilising enzyme, C-terminal CJO35_07895 IPR023151 PEP-utilising enzyme, conserved site CJO35_07895 IPR006318 Phosphotransferase system, enzyme I-like CJO35_07895 IPR024692 Phosphotransferase system, enzyme I CJO35_07895 IPR008731 Phosphotransferase system, enzyme I N-terminal CJO35_07895 IPR036618 PtsI, HPr-binding domain superfamily CJO35_07895 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CJO35_07895 IPR040442 Pyruvate kinase-like domain superfamily CJO35_07895 IPR036637 Phosphohistidine domain superfamily CJO35_07900 IPR022608 Transcription regulator SplA CJO35_07905 IPR007197 Radical SAM CJO35_07905 IPR034560 Spore photoproduct lyase, Bacilli type CJO35_07905 IPR023897 Spore photoproduct lyase CJO35_07910 IPR016181 Acyl-CoA N-acyltransferase CJO35_07910 IPR000182 GNAT domain CJO35_07915 IPR029151 Periplasmic sensor-like domain superfamily CJO35_07915 IPR003660 HAMP domain CJO35_07915 IPR033479 Double Cache domain 1 CJO35_07915 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_07920 IPR036291 NAD(P)-binding domain superfamily CJO35_07920 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_07920 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CJO35_07920 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_07925 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_07925 IPR036291 NAD(P)-binding domain superfamily CJO35_07925 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CJO35_07925 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CJO35_07925 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CJO35_07925 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CJO35_07925 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_07930 IPR035940 CAP superfamily CJO35_07930 IPR014258 CAP domain, YkwD-like CJO35_07930 IPR014044 CAP domain CJO35_07935 IPR001460 Penicillin-binding protein, transpeptidase CJO35_07935 IPR012338 Beta-lactamase/transpeptidase-like CJO35_07935 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CJO35_07935 IPR005311 Penicillin-binding protein, dimerisation domain CJO35_07940 IPR005467 Histidine kinase domain CJO35_07940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_07940 IPR035965 PAS domain superfamily CJO35_07940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_07940 IPR013767 PAS fold CJO35_07940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_07940 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_07940 IPR001610 PAC motif CJO35_07940 IPR000014 PAS domain CJO35_07940 IPR013655 PAS fold-3 CJO35_07940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_07945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_07945 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_07945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_07945 IPR004839 Aminotransferase, class I/classII CJO35_07945 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CJO35_07950 IPR010432 RDD CJO35_07960 IPR011006 CheY-like superfamily CJO35_07960 IPR002545 CheW-like domain CJO35_07960 IPR001789 Signal transduction response regulator, receiver domain CJO35_07960 IPR024181 Chemotaxis response regulator CheV CJO35_07960 IPR036061 CheW-like domain superfamily CJO35_07965 IPR025552 YkyB-like protein CJO35_07970 IPR004751 Drug antiporter protein CJO35_07970 IPR011701 Major facilitator superfamily CJO35_07970 IPR020846 Major facilitator superfamily domain CJO35_07970 IPR036259 MFS transporter superfamily CJO35_07975 IPR038063 L,D-transpeptidase catalytic domain-like CJO35_07975 IPR036779 LysM domain superfamily CJO35_07975 IPR005490 L,D-transpeptidase catalytic domain CJO35_07975 IPR018392 LysM domain CJO35_07985 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CJO35_07985 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_07985 IPR029052 Metallo-dependent phosphatase-like CJO35_07985 IPR006311 Twin-arginine translocation pathway, signal sequence CJO35_07990 IPR036291 NAD(P)-binding domain superfamily CJO35_07990 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_07995 IPR018842 YkuI, C-terminal CJO35_07995 IPR035919 EAL domain superfamily CJO35_07995 IPR001633 EAL domain CJO35_07995 IPR029151 Periplasmic sensor-like domain superfamily CJO35_08005 IPR038073 YkuJ-like superfamily CJO35_08005 IPR014904 Protein of unknown function DUF1797 CJO35_08015 IPR007405 Bacteriophage KVP40, Orf299 CJO35_08020 IPR025446 Antirepressor AbbA CJO35_08030 IPR036390 Winged helix DNA-binding domain superfamily CJO35_08030 IPR005119 LysR, substrate-binding CJO35_08030 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_08030 IPR000847 Transcription regulator HTH, LysR CJO35_08035 IPR029039 Flavoprotein-like superfamily CJO35_08035 IPR010087 Flavodoxin, short chain CJO35_08035 IPR001094 Flavodoxin-like CJO35_08035 IPR008254 Flavodoxin/nitric oxide synthase CJO35_08040 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CJO35_08045 IPR029039 Flavoprotein-like superfamily CJO35_08045 IPR010087 Flavodoxin, short chain CJO35_08045 IPR001226 Flavodoxin, conserved site CJO35_08045 IPR001094 Flavodoxin-like CJO35_08045 IPR008254 Flavodoxin/nitric oxide synthase CJO35_08050 IPR011004 Trimeric LpxA-like superfamily CJO35_08050 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH CJO35_08050 IPR018357 Hexapeptide transferase, conserved site CJO35_08050 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal CJO35_08050 IPR001451 Hexapeptide repeat CJO35_08055 IPR017439 Amidohydrolase CJO35_08055 IPR023905 Acetyldiaminopimelate deacetylase CJO35_08055 IPR002933 Peptidase M20 CJO35_08055 IPR011650 Peptidase M20, dimerisation domain CJO35_08055 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_08060 IPR005370 Uncharacterised protein family UPF0180 CJO35_08065 IPR019479 Peroxiredoxin, C-terminal CJO35_08065 IPR024706 Peroxiredoxin, AhpC-type CJO35_08065 IPR013766 Thioredoxin domain CJO35_08065 IPR036249 Thioredoxin-like superfamily CJO35_08065 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CJO35_08070 IPR013766 Thioredoxin domain CJO35_08070 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CJO35_08070 IPR036249 Thioredoxin-like superfamily CJO35_08085 IPR025877 MobA-like NTP transferase CJO35_08085 IPR013482 Molybdenum cofactor guanylyltransferase CJO35_08085 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_08090 IPR035985 Ubiquitin-activating enzyme CJO35_08090 IPR000594 THIF-type NAD/FAD binding fold CJO35_08095 IPR036135 MoeA, N-terminal and linker domain superfamily CJO35_08095 IPR005110 MoeA, N-terminal and linker domain CJO35_08095 IPR036688 MoeA, C-terminal, domain IV superfamily CJO35_08095 IPR005111 MoeA, C-terminal, domain IV CJO35_08095 IPR038987 Molybdopterin biosynthesis protein MoeA-like CJO35_08095 IPR001453 MoaB/Mog domain CJO35_08095 IPR036425 MoaB/Mog-like domain superfamily CJO35_08100 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CJO35_08100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08105 IPR003448 Molybdopterin biosynthesis MoaE CJO35_08105 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CJO35_08110 IPR003749 Sulfur carrier ThiS/MoaD-like CJO35_08110 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CJO35_08110 IPR012675 Beta-grasp domain superfamily CJO35_08120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08120 IPR039421 Type I protein exporter CJO35_08120 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_08120 IPR011527 ABC transporter type 1, transmembrane domain CJO35_08120 IPR003593 AAA+ ATPase domain CJO35_08120 IPR003439 ABC transporter-like CJO35_08120 IPR017871 ABC transporter, conserved site CJO35_08125 IPR039421 Type I protein exporter CJO35_08125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08125 IPR017871 ABC transporter, conserved site CJO35_08125 IPR003439 ABC transporter-like CJO35_08125 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_08125 IPR011527 ABC transporter type 1, transmembrane domain CJO35_08125 IPR003593 AAA+ ATPase domain CJO35_08130 IPR006977 Yip1 domain CJO35_08135 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJO35_08135 IPR006143 RND efflux pump, membrane fusion protein CJO35_08140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08140 IPR017871 ABC transporter, conserved site CJO35_08140 IPR003439 ABC transporter-like CJO35_08140 IPR003593 AAA+ ATPase domain CJO35_08145 IPR005085 Carbohydrate binding module family 25 CJO35_08145 IPR003838 ABC transporter permease protein domain CJO35_08145 IPR025857 MacB-like periplasmic core domain CJO35_08150 IPR014036 DeoR C-terminal sensor domain CJO35_08150 IPR001034 DeoR-type HTH domain CJO35_08150 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CJO35_08150 IPR036390 Winged helix DNA-binding domain superfamily CJO35_08150 IPR037171 NagB/RpiA transferase-like CJO35_08155 IPR022463 Fructose 1-phosphate kinase CJO35_08155 IPR017583 Tagatose/fructose phosphokinase CJO35_08155 IPR029056 Ribokinase-like CJO35_08155 IPR011611 Carbohydrate kinase PfkB CJO35_08155 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CJO35_08160 IPR016152 Phosphotransferase/anion transporter CJO35_08160 IPR002178 PTS EIIA type-2 domain CJO35_08160 IPR036095 PTS system IIB component-like superfamily CJO35_08160 IPR013011 Phosphotransferase system, EIIB component, type 2 CJO35_08160 IPR013014 Phosphotransferase system, EIIC component, type 2 CJO35_08160 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_08160 IPR004715 Phosphotransferase system, IIA component fructose subfamily CJO35_08160 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CJO35_08160 IPR006327 Phosphotransferase system, fructose IIC component CJO35_08165 IPR036286 LexA/Signal peptidase-like superfamily CJO35_08165 IPR000223 Peptidase S26A, signal peptidase I CJO35_08165 IPR019758 Peptidase S26A, signal peptidase I, conserved site CJO35_08165 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CJO35_08165 IPR019756 Peptidase S26A, signal peptidase I, serine active site CJO35_08165 IPR019533 Peptidase S26 CJO35_08180 IPR003593 AAA+ ATPase domain CJO35_08180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08180 IPR032781 ABC-transporter extension domain CJO35_08180 IPR003439 ABC transporter-like CJO35_08190 IPR035097 Peptidase M29, N-terminal CJO35_08190 IPR000787 Peptidase M29 CJO35_08195 IPR035379 Uncharacterized protein YkpC-like CJO35_08200 IPR004753 Cell shape determining protein MreB CJO35_08205 IPR040678 AbrB, C-terminal CJO35_08205 IPR007159 SpoVT-AbrB domain CJO35_08205 IPR037914 SpoVT-AbrB domain superfamily CJO35_08210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_08210 IPR013767 PAS fold CJO35_08210 IPR035965 PAS domain superfamily CJO35_08210 IPR000700 PAS-associated, C-terminal CJO35_08210 IPR001610 PAC motif CJO35_08210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_08210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_08210 IPR005467 Histidine kinase domain CJO35_08210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_08210 IPR000014 PAS domain CJO35_08210 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_08215 IPR036291 NAD(P)-binding domain superfamily CJO35_08215 IPR006037 Regulator of K+ conductance, C-terminal CJO35_08215 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CJO35_08215 IPR003148 Regulator of K+ conductance, N-terminal CJO35_08220 IPR032466 Metal-dependent hydrolase CJO35_08220 IPR006679 Adenine deaminase CJO35_08220 IPR011059 Metal-dependent hydrolase, composite domain superfamily CJO35_08220 IPR006680 Amidohydrolase-related CJO35_08220 IPR026912 Adenine deaminase C-terminal domain CJO35_08225 IPR001279 Metallo-beta-lactamase CJO35_08225 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_08225 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CJO35_08225 IPR004613 Ribonuclease J CJO35_08225 IPR042173 Ribonuclease J, domain 2 CJO35_08225 IPR030854 Ribonuclease J, bacteria CJO35_08225 IPR041636 Ribonuclease J, C-terminal CJO35_08225 IPR001587 Ribonuclease J, conserved site CJO35_08235 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_08235 IPR023214 HAD superfamily CJO35_08235 IPR000150 Cof family CJO35_08235 IPR036412 HAD-like superfamily CJO35_08245 IPR023635 Peptide deformylase CJO35_08245 IPR036821 Peptide deformylase superfamily CJO35_08255 IPR036785 YkyA-like superfamily CJO35_08255 IPR019454 Putative cell-wall binding lipoprotein YkyA-like CJO35_08260 IPR029061 Thiamin diphosphate-binding fold CJO35_08260 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha CJO35_08260 IPR001017 Dehydrogenase, E1 component CJO35_08265 IPR005475 Transketolase-like, pyrimidine-binding domain CJO35_08265 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CJO35_08265 IPR029061 Thiamin diphosphate-binding fold CJO35_08265 IPR033248 Transketolase, C-terminal domain CJO35_08270 IPR036625 E3-binding domain superfamily CJO35_08270 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CJO35_08270 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CJO35_08270 IPR000089 Biotin/lipoyl attachment CJO35_08270 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_08270 IPR004167 Peripheral subunit-binding domain CJO35_08270 IPR011053 Single hybrid motif CJO35_08275 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CJO35_08275 IPR006258 Dihydrolipoamide dehydrogenase CJO35_08275 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CJO35_08275 IPR023753 FAD/NAD(P)-binding domain CJO35_08275 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_08275 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CJO35_08275 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO35_08285 IPR025236 SR1 protein CJO35_08290 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CJO35_08290 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CJO35_08290 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_08290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_08290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_08290 IPR000310 Orn/Lys/Arg decarboxylase, major domain CJO35_08295 IPR023324 BH2638-like superfamily CJO35_08295 IPR007920 Protein of unknown function UPF0223 CJO35_08300 IPR009403 Protein of unknown function UPF0637 CJO35_08310 IPR020550 Inositol monophosphatase, conserved site CJO35_08310 IPR000760 Inositol monophosphatase-like CJO35_08310 IPR020583 Inositol monophosphatase, metal-binding site CJO35_08315 IPR016181 Acyl-CoA N-acyltransferase CJO35_08315 IPR000182 GNAT domain CJO35_08330 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_08330 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_08330 IPR013325 RNA polymerase sigma factor, region 2 CJO35_08330 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_08330 IPR007627 RNA polymerase sigma-70 region 2 CJO35_08330 IPR014296 RNA polymerase sigma-M, bacillaceae CJO35_08330 IPR014284 RNA polymerase sigma-70 like domain CJO35_08330 IPR039425 RNA polymerase sigma-70 like CJO35_08335 IPR027383 Putative zinc-finger CJO35_08350 IPR025620 YlaH-like protein CJO35_08355 IPR000835 MarR-type HTH domain CJO35_08355 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_08355 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_08355 IPR036390 Winged helix DNA-binding domain superfamily CJO35_08360 IPR002938 FAD-binding domain CJO35_08360 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_08365 IPR019241 Protein of unknown function DUF2197 CJO35_08370 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like CJO35_08370 IPR014247 Sporulation lipoprotein YhcN/YlaJ CJO35_08375 IPR002716 PIN domain CJO35_08375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08375 IPR003714 PhoH-like protein CJO35_08375 IPR029060 PIN-like domain superfamily CJO35_08385 IPR015868 Glutaminase CJO35_08385 IPR012338 Beta-lactamase/transpeptidase-like CJO35_08390 IPR009983 Uncharacterised protein family UPF0358 CJO35_08390 IPR036270 UPF0358 superfamily CJO35_08395 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CJO35_08395 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CJO35_08400 IPR011053 Single hybrid motif CJO35_08400 IPR016185 Pre-ATP-grasp domain superfamily CJO35_08400 IPR003379 Carboxylase, conserved domain CJO35_08400 IPR011054 Rudiment single hybrid motif CJO35_08400 IPR000891 Pyruvate carboxyltransferase CJO35_08400 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CJO35_08400 IPR005482 Biotin carboxylase, C-terminal CJO35_08400 IPR000089 Biotin/lipoyl attachment CJO35_08400 IPR011764 Biotin carboxylation domain CJO35_08400 IPR005481 Biotin carboxylase-like, N-terminal domain CJO35_08400 IPR013785 Aldolase-type TIM barrel CJO35_08400 IPR011761 ATP-grasp fold CJO35_08400 IPR005930 Pyruvate carboxylase CJO35_08405 IPR003780 COX15/CtaA family CJO35_08405 IPR023755 Heme A synthase, type 1 CJO35_08410 IPR030470 UbiA prenyltransferase conserved site CJO35_08410 IPR000537 UbiA prenyltransferase family CJO35_08410 IPR006369 Protohaem IX farnesyltransferase CJO35_08415 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CJO35_08415 IPR014222 Cytochrome c oxidase, subunit II CJO35_08415 IPR008972 Cupredoxin CJO35_08415 IPR009056 Cytochrome c-like domain CJO35_08415 IPR036909 Cytochrome c-like domain superfamily CJO35_08415 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CJO35_08415 IPR034236 Caa3-type Cytochrome c oxidase subunit II, cupredoxin domain CJO35_08415 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CJO35_08415 IPR001505 Copper centre Cu(A) CJO35_08420 IPR014241 Cytochrome c oxidase, subunit I bacterial type CJO35_08420 IPR000883 Cytochrome c oxidase subunit I CJO35_08420 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CJO35_08420 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CJO35_08420 IPR023616 Cytochrome c oxidase-like, subunit I domain CJO35_08425 IPR000298 Cytochrome c oxidase subunit III-like CJO35_08425 IPR033946 Ubiquinol oxidase subunit III domain CJO35_08425 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CJO35_08425 IPR024791 Cytochrome c oxidase subunit III CJO35_08425 IPR035973 Cytochrome c oxidase subunit III-like superfamily CJO35_08430 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CJO35_08430 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae CJO35_08435 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG CJO35_08435 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related CJO35_08440 IPR036491 YugN-like superfamily CJO35_08440 IPR014967 Uncharacterised protein family, YugN-like CJO35_08445 IPR000644 CBS domain CJO35_08450 IPR014044 CAP domain CJO35_08450 IPR035940 CAP superfamily CJO35_08450 IPR029410 CAP-associated domain CJO35_08455 IPR025953 Putative coat protein YlbD CJO35_08460 IPR025613 YlbE-like protein CJO35_08465 IPR010368 Control of competence regulator ComK, YlbF/YmcA CJO35_08465 IPR023378 YheA/YmcA-like domain superfamily CJO35_08470 IPR016979 Protein of unknown function DUF2129 CJO35_08475 IPR004398 RNA methyltransferase, RsmD CJO35_08475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_08480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_08480 IPR001980 Phosphopantetheine adenylyltransferase CJO35_08480 IPR004821 Cytidyltransferase-like domain CJO35_08485 IPR014226 Sporulation integral membrane protein YlbJ CJO35_08485 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CJO35_08490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_08490 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_08490 IPR008269 Peptidase S16, Lon proteolytic domain CJO35_08490 IPR039381 Endopeptidase La, PDZ domain CJO35_08490 IPR001478 PDZ domain CJO35_08490 IPR027065 Lon protease CJO35_08490 IPR036034 PDZ superfamily CJO35_08495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_08495 IPR008513 tRNA(Met) cytidine acetate ligase CJO35_08500 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CJO35_08505 IPR002677 Ribosomal protein L32p CJO35_08505 IPR011332 Zinc-binding ribosomal protein CJO35_08510 IPR009057 Homeobox-like domain superfamily CJO35_08510 IPR017930 Myb domain CJO35_08510 IPR014243 Transcription factor, RsfA CJO35_08515 IPR000182 GNAT domain CJO35_08515 IPR016181 Acyl-CoA N-acyltransferase CJO35_08515 IPR017274 Putative N-acetyltransferase YlbP CJO35_08520 IPR013332 Ketopantoate reductase, N-terminal domain CJO35_08520 IPR013752 Ketopantoate reductase, C-terminal domain CJO35_08520 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_08520 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_08520 IPR003710 Ketopantoate reductase ApbA/PanE CJO35_08520 IPR036291 NAD(P)-binding domain superfamily CJO35_08525 IPR011199 Bacillithiol biosynthesis BshC CJO35_08530 IPR003444 Transcriptional regulator MraZ CJO35_08530 IPR035644 MraZ, C-terminal CJO35_08530 IPR007159 SpoVT-AbrB domain CJO35_08530 IPR035642 MraZ, N-terminal CJO35_08530 IPR038619 MraZ superfamily CJO35_08530 IPR037914 SpoVT-AbrB domain superfamily CJO35_08530 IPR020603 MraZ domain CJO35_08535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_08535 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CJO35_08535 IPR002903 Ribosomal RNA small subunit methyltransferase H CJO35_08540 IPR011922 Cell division protein FtsL CJO35_08550 IPR011927 Stage V sporulation protein D CJO35_08550 IPR012338 Beta-lactamase/transpeptidase-like CJO35_08550 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CJO35_08550 IPR005311 Penicillin-binding protein, dimerisation domain CJO35_08550 IPR005543 PASTA domain CJO35_08550 IPR001460 Penicillin-binding protein, transpeptidase CJO35_08555 IPR000713 Mur ligase, N-terminal catalytic domain CJO35_08555 IPR004101 Mur ligase, C-terminal CJO35_08555 IPR036565 Mur-like, catalytic domain superfamily CJO35_08555 IPR035911 MurE/MurF, N-terminal CJO35_08555 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CJO35_08555 IPR013221 Mur ligase, central CJO35_08555 IPR036615 Mur ligase, C-terminal domain superfamily CJO35_08560 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CJO35_08560 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CJO35_08560 IPR000715 Glycosyl transferase, family 4 CJO35_08565 IPR013221 Mur ligase, central CJO35_08565 IPR036565 Mur-like, catalytic domain superfamily CJO35_08565 IPR004101 Mur ligase, C-terminal CJO35_08565 IPR036615 Mur ligase, C-terminal domain superfamily CJO35_08565 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CJO35_08570 IPR013437 Probable peptidoglycan glycosyltransferase FtsW CJO35_08570 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CJO35_08570 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CJO35_08570 IPR013438 Sporulation stage V, protein E CJO35_08575 IPR007235 Glycosyl transferase, family 28, C-terminal CJO35_08575 IPR006009 N-acetylglucosaminyltransferase, MurG CJO35_08575 IPR004276 Glycosyltransferase family 28, N-terminal domain CJO35_08580 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CJO35_08580 IPR016167 FAD-binding, type PCMH, subdomain 1 CJO35_08580 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CJO35_08580 IPR016169 FAD-binding, type PCMH, subdomain 2 CJO35_08580 IPR006094 FAD linked oxidase, N-terminal CJO35_08580 IPR036318 FAD-binding, type PCMH-like superfamily CJO35_08580 IPR016166 FAD-binding domain, PCMH-type CJO35_08580 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CJO35_08585 IPR026580 Cell division protein DivIB CJO35_08585 IPR034746 POTRA domain CJO35_08585 IPR013685 POTRA domain, FtsQ-type CJO35_08590 IPR010273 Protein of unknown function DUF881 CJO35_08595 IPR010273 Protein of unknown function DUF881 CJO35_08600 IPR009709 Protein of unknown function DUF1290 CJO35_08605 IPR020823 Cell division protein FtsA CJO35_08605 IPR003494 SHS2 domain inserted in FtsA CJO35_08610 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CJO35_08610 IPR008280 Tubulin/FtsZ, C-terminal CJO35_08610 IPR024757 Cell division protein FtsZ, C-terminal CJO35_08610 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CJO35_08610 IPR003008 Tubulin/FtsZ, GTPase domain CJO35_08610 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily CJO35_08610 IPR000158 Cell division protein FtsZ CJO35_08610 IPR020805 Cell division protein FtsZ, conserved site CJO35_08615 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_08615 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_08615 IPR036852 Peptidase S8/S53 domain superfamily CJO35_08615 IPR000209 Peptidase S8/S53 domain CJO35_08615 IPR012103 Peptidase S8A, bacillopeptidase F CJO35_08615 IPR015500 Peptidase S8, subtilisin-related CJO35_08615 IPR013783 Immunoglobulin-like fold CJO35_08615 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CJO35_08615 IPR033857 Bacillopeptidase F, peptidase domain CJO35_08615 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_08615 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 CJO35_08620 IPR012103 Peptidase S8A, bacillopeptidase F CJO35_08620 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 CJO35_08620 IPR015500 Peptidase S8, subtilisin-related CJO35_08620 IPR036852 Peptidase S8/S53 domain superfamily CJO35_08620 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_08620 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_08620 IPR000209 Peptidase S8/S53 domain CJO35_08620 IPR033857 Bacillopeptidase F, peptidase domain CJO35_08620 IPR008969 Carboxypeptidase-like, regulatory domain superfamily CJO35_08620 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_08620 IPR013783 Immunoglobulin-like fold CJO35_08625 IPR005081 Sigma-E processing peptidase SpoIIGA CJO35_08630 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_08630 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_08630 IPR014200 RNA polymerase sigma-E type CJO35_08630 IPR014284 RNA polymerase sigma-70 like domain CJO35_08630 IPR000943 RNA polymerase sigma-70 CJO35_08630 IPR007627 RNA polymerase sigma-70 region 2 CJO35_08630 IPR007630 RNA polymerase sigma-70 region 4 CJO35_08630 IPR013325 RNA polymerase sigma factor, region 2 CJO35_08635 IPR014284 RNA polymerase sigma-70 like domain CJO35_08635 IPR007624 RNA polymerase sigma-70 region 3 CJO35_08635 IPR007630 RNA polymerase sigma-70 region 4 CJO35_08635 IPR013325 RNA polymerase sigma factor, region 2 CJO35_08635 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_08635 IPR007627 RNA polymerase sigma-70 region 2 CJO35_08635 IPR000943 RNA polymerase sigma-70 CJO35_08635 IPR014212 RNA polymerase sigma-G type CJO35_08635 IPR014322 RNA polymerase sigma-B/F/G type CJO35_08640 IPR003593 AAA+ ATPase domain CJO35_08640 IPR017871 ABC transporter, conserved site CJO35_08640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08640 IPR003439 ABC transporter-like CJO35_08645 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted CJO35_08645 IPR013216 Methyltransferase type 11 CJO35_08645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_08650 IPR014238 Sporulation protein YlmC/YmxH CJO35_08650 IPR011033 PRC-barrel-like superfamily CJO35_08650 IPR027275 PRC-barrel domain CJO35_08660 IPR001608 Alanine racemase, N-terminal CJO35_08660 IPR029066 PLP-binding barrel CJO35_08660 IPR011078 Pyridoxal phosphate homeostasis protein CJO35_08665 IPR023052 Cell division protein SepF CJO35_08665 IPR038594 SepF-like superfamily CJO35_08665 IPR007561 Cell division protein SepF/SepF-related CJO35_08670 IPR003425 CCB3/YggT CJO35_08675 IPR002942 RNA-binding S4 domain CJO35_08675 IPR040591 YlmH, putative RNA-binding domain CJO35_08675 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CJO35_08675 IPR036986 RNA-binding S4 domain superfamily CJO35_08680 IPR007793 DivIVA family CJO35_08680 IPR019933 DivIVA domain CJO35_08685 IPR023585 Isoleucine-tRNA ligase, type 1 CJO35_08685 IPR002301 Isoleucine-tRNA ligase CJO35_08685 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CJO35_08685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_08685 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CJO35_08685 IPR002300 Aminoacyl-tRNA synthetase, class Ia CJO35_08685 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CJO35_08685 IPR010663 Zinc finger, FPG/IleRS-type CJO35_08685 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_08685 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CJO35_08690 IPR016841 Transcription regulator DksA-related, predicted CJO35_08690 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CJO35_08690 IPR000962 Zinc finger, DksA/TraR C4-type CJO35_08695 IPR001872 Peptidase A8, signal peptidase II CJO35_08700 IPR036986 RNA-binding S4 domain superfamily CJO35_08700 IPR020103 Pseudouridine synthase, catalytic domain superfamily CJO35_08700 IPR002942 RNA-binding S4 domain CJO35_08700 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CJO35_08700 IPR006225 Pseudouridine synthase, RluC/RluD CJO35_08700 IPR006145 Pseudouridine synthase, RsuA/RluA CJO35_08705 IPR000836 Phosphoribosyltransferase domain CJO35_08705 IPR029057 Phosphoribosyltransferase-like CJO35_08705 IPR023050 Bifunctional protein PyrR CJO35_08710 IPR006043 Xanthine/uracil/vitamin C permease CJO35_08710 IPR029935 Uracil permease CJO35_08710 IPR006042 Xanthine/uracil permease CJO35_08715 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CJO35_08715 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CJO35_08715 IPR006130 Aspartate/ornithine carbamoyltransferase CJO35_08715 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CJO35_08715 IPR002082 Aspartate carbamoyltransferase CJO35_08720 IPR004722 Dihydroorotase CJO35_08720 IPR002195 Dihydroorotase, conserved site CJO35_08720 IPR032466 Metal-dependent hydrolase CJO35_08720 IPR006680 Amidohydrolase-related CJO35_08720 IPR011059 Metal-dependent hydrolase, composite domain superfamily CJO35_08725 IPR029062 Class I glutamine amidotransferase-like CJO35_08725 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CJO35_08725 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CJO35_08725 IPR006274 Carbamoyl-phosphate synthase, small subunit CJO35_08725 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CJO35_08725 IPR017926 Glutamine amidotransferase CJO35_08730 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CJO35_08730 IPR016185 Pre-ATP-grasp domain superfamily CJO35_08730 IPR006275 Carbamoyl-phosphate synthase, large subunit CJO35_08730 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CJO35_08730 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CJO35_08730 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CJO35_08730 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CJO35_08730 IPR011607 Methylglyoxal synthase-like domain CJO35_08730 IPR036914 Methylglyoxal synthase-like domain superfamily CJO35_08730 IPR011761 ATP-grasp fold CJO35_08735 IPR001433 Oxidoreductase FAD/NAD(P)-binding CJO35_08735 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit CJO35_08735 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit CJO35_08735 IPR017927 FAD-binding domain, ferredoxin reductase-type CJO35_08735 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CJO35_08735 IPR017938 Riboflavin synthase-like beta-barrel CJO35_08735 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CJO35_08735 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily CJO35_08740 IPR033888 Dihydroorotate dehydrogenase, class 1B CJO35_08740 IPR005720 Dihydroorotate dehydrogenase domain CJO35_08740 IPR024920 Dihydroorotate dehydrogenase, class 1 CJO35_08740 IPR013785 Aldolase-type TIM barrel CJO35_08740 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CJO35_08740 IPR001295 Dihydroorotate dehydrogenase, conserved site CJO35_08745 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CJO35_08745 IPR001754 Orotidine 5'-phosphate decarboxylase domain CJO35_08745 IPR011060 Ribulose-phosphate binding barrel CJO35_08745 IPR014732 Orotidine 5'-phosphate decarboxylase CJO35_08745 IPR013785 Aldolase-type TIM barrel CJO35_08750 IPR029057 Phosphoribosyltransferase-like CJO35_08750 IPR000836 Phosphoribosyltransferase domain CJO35_08750 IPR004467 Orotate phosphoribosyl transferase domain CJO35_08750 IPR023031 Orotate phosphoribosyltransferase CJO35_08760 IPR011798 Adenosine 5'-phosphosulphate reductase CJO35_08760 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CJO35_08760 IPR002500 Phosphoadenosine phosphosulphate reductase CJO35_08760 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_08765 IPR001204 Phosphate transporter CJO35_08770 IPR025980 ATP-sulfurylase PUA-like domain CJO35_08770 IPR020792 Sulphate adenylyltransferase, prokaryotic-type CJO35_08770 IPR024951 Sulphate adenylyltransferase catalytic domain CJO35_08770 IPR015947 PUA-like superfamily CJO35_08770 IPR002650 Sulphate adenylyltransferase CJO35_08770 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_08775 IPR002891 Adenylyl-sulfate kinase CJO35_08775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08780 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CJO35_08780 IPR000878 Tetrapyrrole methylase CJO35_08780 IPR006366 Uroporphyrin-III C-methyltransferase CJO35_08780 IPR035996 Tetrapyrrole methylase superfamily CJO35_08780 IPR014777 Tetrapyrrole methylase, subdomain 1 CJO35_08780 IPR014776 Tetrapyrrole methylase, subdomain 2 CJO35_08785 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX CJO35_08790 IPR006367 Sirohaem synthase, N-terminal CJO35_08790 IPR036291 NAD(P)-binding domain superfamily CJO35_08790 IPR028161 Siroheme biosynthesis protein Met8 CJO35_08800 IPR004014 Cation-transporting P-type ATPase, N-terminal CJO35_08800 IPR023298 P-type ATPase, transmembrane domain superfamily CJO35_08800 IPR008250 P-type ATPase, A domain superfamily CJO35_08800 IPR036412 HAD-like superfamily CJO35_08800 IPR023214 HAD superfamily CJO35_08800 IPR006068 Cation-transporting P-type ATPase, C-terminal CJO35_08800 IPR005782 P-type ATPase, subfamily IIA, SERCA-type CJO35_08800 IPR023299 P-type ATPase, cytoplasmic domain N CJO35_08800 IPR018303 P-type ATPase, phosphorylation site CJO35_08800 IPR001757 P-type ATPase CJO35_08805 IPR013527 YicC-like, N-terminal CJO35_08805 IPR013551 Domain of unknown function DUF1732 CJO35_08805 IPR005229 Conserved hypothetical protein CHP00255 CJO35_08810 IPR007169 Extracellular matrix regulatory protein A CJO35_08815 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CJO35_08815 IPR017665 Guanylate kinase CJO35_08815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08815 IPR020590 Guanylate kinase, conserved site CJO35_08815 IPR008144 Guanylate kinase-like domain CJO35_08820 IPR036161 RPB6/omega subunit-like superfamily CJO35_08820 IPR003716 DNA-directed RNA polymerase, omega subunit CJO35_08820 IPR006110 RNA polymerase, subunit omega/K/RPB6 CJO35_08820 IPR012293 RNA polymerase subunit, RPB6/omega CJO35_08825 IPR035929 CoaB-like superfamily CJO35_08825 IPR003382 Flavoprotein CJO35_08825 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CJO35_08825 IPR036551 Flavin prenyltransferase-like CJO35_08825 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CJO35_08830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08830 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_08830 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CJO35_08830 IPR041236 Primosomal protein N, C-terminal domain CJO35_08830 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CJO35_08830 IPR001650 Helicase, C-terminal CJO35_08830 IPR005259 Primosomal protein N' CJO35_08830 IPR006935 Helicase/UvrB, N-terminal CJO35_08830 IPR041222 Primosomal protein N', 3' DNA-binding domain CJO35_08835 IPR036821 Peptide deformylase superfamily CJO35_08835 IPR023635 Peptide deformylase CJO35_08840 IPR011034 Formyl transferase-like, C-terminal domain superfamily CJO35_08840 IPR002376 Formyl transferase, N-terminal CJO35_08840 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CJO35_08840 IPR005794 Methionyl-tRNA formyltransferase CJO35_08840 IPR036477 Formyl transferase, N-terminal domain superfamily CJO35_08840 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CJO35_08840 IPR005793 Formyl transferase, C-terminal CJO35_08840 IPR037022 Formyl transferase, C-terminal domain superfamily CJO35_08845 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CJO35_08845 IPR004573 rRNA small subunit methyltransferase B CJO35_08845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_08845 IPR023267 RNA (C5-cytosine) methyltransferase CJO35_08845 IPR006027 NusB/RsmB/TIM44 CJO35_08845 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CJO35_08845 IPR035926 NusB-like superfamily CJO35_08850 IPR007197 Radical SAM CJO35_08850 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CJO35_08850 IPR027492 Dual-specificity RNA methyltransferase RlmN CJO35_08850 IPR040072 Methyltransferase (Class A) CJO35_08850 IPR013785 Aldolase-type TIM barrel CJO35_08855 IPR001932 PPM-type phosphatase domain CJO35_08855 IPR036457 PPM-type phosphatase domain superfamily CJO35_08855 IPR015655 Protein phosphatase 2C family CJO35_08860 IPR000719 Protein kinase domain CJO35_08860 IPR017441 Protein kinase, ATP binding site CJO35_08860 IPR011009 Protein kinase-like domain superfamily CJO35_08860 IPR005543 PASTA domain CJO35_08860 IPR008271 Serine/threonine-protein kinase, active site CJO35_08865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08865 IPR004881 Ribosome biogenesis GTPase RsgA CJO35_08865 IPR010914 RsgA GTPase domain CJO35_08865 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CJO35_08865 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CJO35_08865 IPR012340 Nucleic acid-binding, OB-fold CJO35_08870 IPR013785 Aldolase-type TIM barrel CJO35_08870 IPR000056 Ribulose-phosphate 3-epimerase-like CJO35_08870 IPR011060 Ribulose-phosphate binding barrel CJO35_08870 IPR026019 Ribulose-phosphate 3-epimerase CJO35_08875 IPR006282 Thiamin pyrophosphokinase CJO35_08875 IPR007371 Thiamin pyrophosphokinase, catalytic domain CJO35_08875 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily CJO35_08875 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily CJO35_08875 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain CJO35_08880 IPR012609 Sporulation stage V, protein M CJO35_08885 IPR001383 Ribosomal protein L28 CJO35_08885 IPR037147 Ribosomal protein L28/L24 superfamily CJO35_08885 IPR034704 L28p-like CJO35_08885 IPR026569 Ribosomal protein L28/L24 CJO35_08890 IPR005531 Alkaline shock protein Asp23 CJO35_08895 IPR033470 Uncharacterised protein, DhaK domain CJO35_08895 IPR019986 DAK2 domain-containing protein YloV CJO35_08895 IPR036117 DhaL domain superfamily CJO35_08895 IPR004007 DhaL domain CJO35_08900 IPR002912 ACT domain CJO35_08900 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit CJO35_08900 IPR005131 Serine dehydratase beta chain CJO35_08900 IPR029009 Allosteric substrate binding domain superfamily CJO35_08905 IPR004642 Serine dehydratase, alpha subunit CJO35_08905 IPR005130 Serine dehydratase-like, alpha subunit CJO35_08910 IPR004609 ATP-dependent DNA helicase RecG CJO35_08910 IPR011545 DEAD/DEAH box helicase domain CJO35_08910 IPR033454 RecG, wedge domain CJO35_08910 IPR012340 Nucleic acid-binding, OB-fold CJO35_08910 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_08910 IPR001650 Helicase, C-terminal CJO35_08910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08915 IPR036390 Winged helix DNA-binding domain superfamily CJO35_08915 IPR013196 Helix-turn-helix, type 11 CJO35_08915 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_08915 IPR017275 Transcription factor FapR CJO35_08915 IPR006683 Thioesterase domain CJO35_08915 IPR029069 HotDog domain superfamily CJO35_08920 IPR003664 Fatty acid synthesis PlsX protein CJO35_08920 IPR012281 Phospholipid biosynthesis protein, PlsX-like CJO35_08925 IPR014043 Acyl transferase CJO35_08925 IPR024925 Malonyl CoA-acyl carrier protein transacylase CJO35_08925 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CJO35_08925 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CJO35_08925 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CJO35_08925 IPR001227 Acyl transferase domain superfamily CJO35_08930 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CJO35_08930 IPR036291 NAD(P)-binding domain superfamily CJO35_08930 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_08935 IPR036736 ACP-like superfamily CJO35_08935 IPR003231 Acyl carrier protein (ACP) CJO35_08935 IPR009081 Phosphopantetheine binding ACP domain CJO35_08935 IPR006162 Phosphopantetheine attachment site CJO35_08940 IPR000999 Ribonuclease III domain CJO35_08940 IPR011907 Ribonuclease III CJO35_08940 IPR036389 Ribonuclease III, endonuclease domain superfamily CJO35_08940 IPR014720 Double-stranded RNA-binding domain CJO35_08945 IPR036277 SMCs flexible hinge superfamily CJO35_08945 IPR024704 Structural maintenance of chromosomes protein CJO35_08945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08945 IPR003395 RecF/RecN/SMC, N-terminal CJO35_08945 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CJO35_08945 IPR010935 SMCs flexible hinge CJO35_08950 IPR036225 SRP/SRP receptor, N-terminal CJO35_08950 IPR013822 Signal recognition particle SRP54, helical bundle CJO35_08950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08950 IPR003593 AAA+ ATPase domain CJO35_08950 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CJO35_08950 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CJO35_08950 IPR004390 Signal-recognition particle receptor FtsY CJO35_08955 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_08955 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_08955 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CJO35_08960 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CJO35_08960 IPR003593 AAA+ ATPase domain CJO35_08960 IPR013822 Signal recognition particle SRP54, helical bundle CJO35_08960 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CJO35_08960 IPR004780 Signal recognition particle protein CJO35_08960 IPR022941 Signal recognition particle, SRP54 subunit CJO35_08960 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CJO35_08960 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CJO35_08960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08965 IPR020592 Ribosomal protein S16, conserved site CJO35_08965 IPR000307 Ribosomal protein S16 CJO35_08965 IPR023803 Ribosomal protein S16 domain superfamily CJO35_08970 IPR036612 K Homology domain, type 1 superfamily CJO35_08970 IPR020627 Uncharacterised protein family UPF0109 CJO35_08970 IPR009019 K homology domain superfamily, prokaryotic type CJO35_08975 IPR021297 YlqD protein CJO35_08980 IPR002676 RimM, N-terminal CJO35_08980 IPR036976 RimM, N-terminal domain superfamily CJO35_08980 IPR027275 PRC-barrel domain CJO35_08980 IPR011961 16S rRNA processing protein RimM CJO35_08980 IPR009000 Translation protein, beta-barrel domain superfamily CJO35_08980 IPR011033 PRC-barrel-like superfamily CJO35_08985 IPR029028 Alpha/beta knot methyltransferases CJO35_08985 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJO35_08985 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CJO35_08985 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CJO35_08985 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CJO35_08990 IPR038657 Ribosomal protein L19 superfamily CJO35_08990 IPR001857 Ribosomal protein L19 CJO35_08990 IPR018257 Ribosomal protein L19, conserved site CJO35_08990 IPR008991 Translation protein SH3-like domain superfamily CJO35_08995 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CJO35_08995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_08995 IPR016478 GTPase, MTG1 CJO35_08995 IPR006073 GTP binding domain CJO35_08995 IPR019991 GTP-binding protein, ribosome biogenesis CJO35_08995 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily CJO35_09000 IPR022898 Ribonuclease HII CJO35_09000 IPR001352 Ribonuclease HII/HIII CJO35_09000 IPR036397 Ribonuclease H superfamily CJO35_09000 IPR012337 Ribonuclease H-like superfamily CJO35_09000 IPR024567 Ribonuclease HII/HIII domain CJO35_09010 IPR004683 Type III secretion system substrate exporter FlhB-like CJO35_09010 IPR029025 Type III secretion system substrate exporter, C-terminal CJO35_09010 IPR006135 Type III secretion system substrate exporter CJO35_09015 IPR005809 Succinate--CoA synthetase, beta subunit CJO35_09015 IPR016102 Succinyl-CoA synthetase-like CJO35_09015 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CJO35_09015 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CJO35_09015 IPR013815 ATP-grasp fold, subdomain 1 CJO35_09015 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CJO35_09015 IPR011761 ATP-grasp fold CJO35_09020 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CJO35_09020 IPR036291 NAD(P)-binding domain superfamily CJO35_09020 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CJO35_09020 IPR016102 Succinyl-CoA synthetase-like CJO35_09020 IPR005810 Succinyl-CoA ligase, alpha subunit CJO35_09020 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CJO35_09020 IPR003781 CoA-binding CJO35_09025 IPR003488 DNA recombination-mediator protein A CJO35_09030 IPR000380 DNA topoisomerase, type IA CJO35_09030 IPR003601 DNA topoisomerase, type IA, domain 2 CJO35_09030 IPR023405 DNA topoisomerase, type IA, core domain CJO35_09030 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CJO35_09030 IPR013498 DNA topoisomerase, type IA, zn finger CJO35_09030 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CJO35_09030 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CJO35_09030 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CJO35_09030 IPR013497 DNA topoisomerase, type IA, central CJO35_09030 IPR005733 DNA topoisomerase I, bacterial-type CJO35_09030 IPR023406 DNA topoisomerase, type IA, active site CJO35_09030 IPR028612 DNA topoisomerase I, type IA CJO35_09030 IPR006171 TOPRIM domain CJO35_09030 IPR034149 DNA topoisomerase 1, TOPRIM domain CJO35_09035 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO CJO35_09035 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CJO35_09035 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_09035 IPR020595 MnmG-related, conserved site CJO35_09040 IPR010998 Integrase/recombinase, N-terminal CJO35_09040 IPR013762 Integrase-like, catalytic domain superfamily CJO35_09040 IPR002104 Integrase, catalytic domain CJO35_09040 IPR023009 Tyrosine recombinase XerC/XerD CJO35_09040 IPR011931 Tyrosine recombinase XerC CJO35_09040 IPR004107 Integrase, SAM-like, N-terminal CJO35_09040 IPR011010 DNA breaking-rejoining enzyme, catalytic core CJO35_09045 IPR001353 Proteasome, subunit alpha/beta CJO35_09045 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_09045 IPR023333 Proteasome B-type subunit CJO35_09045 IPR022281 ATP-dependent protease, HslV subunit CJO35_09050 IPR019489 Clp ATPase, C-terminal CJO35_09050 IPR003959 ATPase, AAA-type, core CJO35_09050 IPR004491 Heat shock protein HslU CJO35_09050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09050 IPR003593 AAA+ ATPase domain CJO35_09055 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal CJO35_09055 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_09055 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal CJO35_09055 IPR036390 Winged helix DNA-binding domain superfamily CJO35_09055 IPR029016 GAF-like domain superfamily CJO35_09055 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY CJO35_09060 IPR001444 Flagellar basal body rod protein, N-terminal CJO35_09060 IPR019776 Flagellar basal body rod protein, conserved site CJO35_09060 IPR006300 Flagellar basal-body rod protein FlgB CJO35_09065 IPR019776 Flagellar basal body rod protein, conserved site CJO35_09065 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJO35_09065 IPR006299 Flagellar basal-body rod protein FlgC CJO35_09065 IPR001444 Flagellar basal body rod protein, N-terminal CJO35_09070 IPR001624 Flagellar hook-basal body complex protein FliE CJO35_09075 IPR006182 Secretory protein YscJ/FliF CJO35_09075 IPR000067 Flagellar M-ring protein FliF CJO35_09075 IPR013556 Flagellar M-ring C-terminal CJO35_09080 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CJO35_09080 IPR000090 Flagellar motor switch protein FliG CJO35_09080 IPR023087 Flagellar motor switch protein FliG, C-terminal CJO35_09080 IPR032779 Flagellar motor switch protein FliG, middle domain CJO35_09080 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJO35_09085 IPR022524 Flagellar assembly FliH, Bacilli CJO35_09085 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CJO35_09090 IPR005714 ATPase, type III secretion system, FliI/YscN CJO35_09090 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CJO35_09090 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CJO35_09090 IPR032463 ATPase, type III secretion system, FliI CJO35_09090 IPR022425 Flagellar export ATPase FliI, clade 2 CJO35_09090 IPR040627 T3SS EscN ATPase, C-terminal CJO35_09090 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CJO35_09090 IPR000225 Armadillo CJO35_09090 IPR003593 AAA+ ATPase domain CJO35_09090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09095 IPR012823 Flagellar export FliJ CJO35_09105 IPR001635 Flagellar hook-length control protein FliK CJO35_09105 IPR038610 FliK-like, C-terminal domain superfamily CJO35_09105 IPR021136 Flagellar hook-length control protein-like, C-terminal CJO35_09110 IPR005648 Flagellar hook capping protein CJO35_09115 IPR012836 Flagellar basal-body rod FlgF CJO35_09115 IPR019776 Flagellar basal body rod protein, conserved site CJO35_09115 IPR001444 Flagellar basal body rod protein, N-terminal CJO35_09115 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJO35_09115 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CJO35_09115 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CJO35_09120 IPR009384 Swarming motility protein SwrD-like CJO35_09125 IPR005503 Flagellar basal body-associated protein FliL CJO35_09130 IPR001689 Flagellar motor switch protein FliM CJO35_09130 IPR028976 CheC-like superfamily CJO35_09130 IPR001543 Surface presentation of antigen (SpoA) CJO35_09130 IPR036429 SpoA-like superfamily CJO35_09135 IPR001543 Surface presentation of antigen (SpoA) CJO35_09135 IPR012826 Flagellar motor switch FliN CJO35_09135 IPR028976 CheC-like superfamily CJO35_09135 IPR007597 CheC-like protein CJO35_09135 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CJO35_09135 IPR036429 SpoA-like superfamily CJO35_09140 IPR011006 CheY-like superfamily CJO35_09140 IPR001789 Signal transduction response regulator, receiver domain CJO35_09145 IPR022781 Flagellar biosynthesis protein, FliO CJO35_09150 IPR005838 Type III secretion system inner membrane P protein CJO35_09150 IPR005837 Flagellar transport protein FliP CJO35_09155 IPR002191 Bacterial export protein family 3 CJO35_09155 IPR006305 Flagellar biosynthesis protein FliQ CJO35_09160 IPR006303 Flagellar biosynthesis protein FliR CJO35_09160 IPR002010 Type III secretion system inner membrane R protein CJO35_09165 IPR006136 Flagellar biosynthetic protein FlhB CJO35_09165 IPR006135 Type III secretion system substrate exporter CJO35_09165 IPR029025 Type III secretion system substrate exporter, C-terminal CJO35_09170 IPR042193 FHIPEP, domain 3 CJO35_09170 IPR042196 FHIPEP, domain 4 CJO35_09170 IPR025505 FHIPEP conserved site CJO35_09170 IPR006301 Flagellar biosynthesis protein FlhA CJO35_09170 IPR001712 Type III secretion system FHIPEP CJO35_09170 IPR042194 FHIPEP, domain 1 CJO35_09175 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CJO35_09175 IPR020006 Flagellar biosynthesis protein FlhF CJO35_09175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09180 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CJO35_09180 IPR025501 ATP binding protein MinD CJO35_09185 IPR035909 Methylesterase CheB, C-terminal CJO35_09185 IPR011006 CheY-like superfamily CJO35_09185 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CJO35_09185 IPR001789 Signal transduction response regulator, receiver domain CJO35_09185 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CJO35_09190 IPR004105 Histidine kinase CheA-like, homodimeric domain CJO35_09190 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CJO35_09190 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_09190 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding CJO35_09190 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_09190 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CJO35_09190 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily CJO35_09190 IPR002545 CheW-like domain CJO35_09190 IPR036061 CheW-like domain superfamily CJO35_09190 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_09190 IPR035891 CheY-binding domain of CheA CJO35_09190 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_09190 IPR005467 Histidine kinase domain CJO35_09190 IPR036641 HPT domain superfamily CJO35_09195 IPR039315 Chemotaxis protein CheW CJO35_09195 IPR036061 CheW-like domain superfamily CJO35_09195 IPR002545 CheW-like domain CJO35_09200 IPR028976 CheC-like superfamily CJO35_09200 IPR007597 CheC-like protein CJO35_09205 IPR005659 Chemoreceptor glutamine deamidase CheD CJO35_09205 IPR011324 Cytotoxic necrotizing factor-like, catalytic CJO35_09205 IPR038592 CheD-like superfamily CJO35_09210 IPR007630 RNA polymerase sigma-70 region 4 CJO35_09210 IPR012845 RNA polymerase sigma factor, FliA/WhiG CJO35_09210 IPR007624 RNA polymerase sigma-70 region 3 CJO35_09210 IPR007627 RNA polymerase sigma-70 region 2 CJO35_09210 IPR013325 RNA polymerase sigma factor, region 2 CJO35_09210 IPR000943 RNA polymerase sigma-70 CJO35_09210 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_09210 IPR014284 RNA polymerase sigma-70 like domain CJO35_09220 IPR018130 Ribosomal protein S2, conserved site CJO35_09220 IPR001865 Ribosomal protein S2 CJO35_09220 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CJO35_09220 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CJO35_09225 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CJO35_09225 IPR001816 Translation elongation factor EFTs/EF1B CJO35_09225 IPR009060 UBA-like superfamily CJO35_09225 IPR036402 Elongation factor Ts, dimerisation domain superfamily CJO35_09225 IPR018101 Translation elongation factor Ts, conserved site CJO35_09230 IPR015963 Uridylate kinase, bacteria CJO35_09230 IPR036393 Acetylglutamate kinase-like superfamily CJO35_09230 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_09230 IPR011817 Uridylate kinase CJO35_09235 IPR023584 Ribosome recycling factor domain CJO35_09235 IPR036191 RRF superfamily CJO35_09235 IPR002661 Ribosome recycling factor CJO35_09240 IPR001441 Decaprenyl diphosphate synthase-like CJO35_09240 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CJO35_09240 IPR036424 Decaprenyl diphosphate synthase-like superfamily CJO35_09245 IPR000374 Phosphatidate cytidylyltransferase CJO35_09250 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJO35_09250 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CJO35_09250 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CJO35_09250 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CJO35_09250 IPR026877 DXP reductoisomerase C-terminal domain CJO35_09250 IPR036291 NAD(P)-binding domain superfamily CJO35_09255 IPR001478 PDZ domain CJO35_09255 IPR041489 PDZ domain 6 CJO35_09255 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CJO35_09255 IPR008915 Peptidase M50 CJO35_09255 IPR036034 PDZ superfamily CJO35_09260 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CJO35_09260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CJO35_09260 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CJO35_09260 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_09260 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CJO35_09260 IPR033730 Prokaryote proline-tRNA ligase core domain CJO35_09260 IPR004154 Anticodon-binding CJO35_09260 IPR036621 Anticodon-binding domain superfamily CJO35_09260 IPR002316 Proline-tRNA ligase, class IIa CJO35_09260 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CJO35_09265 IPR013520 Exonuclease, RNase T/DNA polymerase III CJO35_09265 IPR036397 Ribonuclease H superfamily CJO35_09265 IPR004013 PHP domain CJO35_09265 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CJO35_09265 IPR029460 DNA polymerase, helix-hairpin-helix motif CJO35_09265 IPR012340 Nucleic acid-binding, OB-fold CJO35_09265 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type CJO35_09265 IPR028112 DNA polymerase III polC-type, N-terminal domain I CJO35_09265 IPR024754 DNA polymerase III polC-like, N-terminal domain II CJO35_09265 IPR040982 DNA polymerase III alpha subunit finger domain CJO35_09265 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CJO35_09265 IPR003141 Polymerase/histidinol phosphatase, N-terminal CJO35_09265 IPR012337 Ribonuclease H-like superfamily CJO35_09275 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_09275 IPR008928 Six-hairpin glycosidase superfamily CJO35_09275 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CJO35_09275 IPR001956 Carbohydrate-binding module 3 CJO35_09275 IPR036966 Carbohydrate-binding module 3 superfamily CJO35_09275 IPR018221 Glycoside hydrolase family 9, His active site CJO35_09275 IPR001701 Glycoside hydrolase family 9 CJO35_09275 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites CJO35_09280 IPR000556 Glycoside hydrolase, 48F CJO35_09280 IPR036966 Carbohydrate-binding module 3 superfamily CJO35_09280 IPR001956 Carbohydrate-binding module 3 CJO35_09280 IPR001701 Glycoside hydrolase family 9 CJO35_09280 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_09280 IPR008928 Six-hairpin glycosidase superfamily CJO35_09280 IPR027390 Endoglucanase F, domain 3 CJO35_09280 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CJO35_09280 IPR023309 Endoglucanase F, domain 2 CJO35_09280 IPR033126 Glycosyl hydrolases family 9, Asp/Glu active sites CJO35_09280 IPR018221 Glycoside hydrolase family 9, His active site CJO35_09285 IPR014756 Immunoglobulin E-set CJO35_09285 IPR017853 Glycoside hydrolase superfamily CJO35_09285 IPR005102 Carbohydrate binding X2 domain CJO35_09285 IPR016282 Glycoside hydrolase, family 5, endoglucanase B CJO35_09285 IPR001547 Glycoside hydrolase, family 5 CJO35_09285 IPR018087 Glycoside hydrolase, family 5, conserved site CJO35_09285 IPR040946 Endoglucanase B, carbohydrate binding domain CJO35_09285 IPR013783 Immunoglobulin-like fold CJO35_09295 IPR003728 Ribosome maturation factor RimP CJO35_09295 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CJO35_09295 IPR028989 Ribosome maturation factor RimP, N-terminal CJO35_09295 IPR035956 RimP, N-terminal domain superfamily CJO35_09295 IPR028998 Ribosome maturation factor RimP, C-terminal CJO35_09300 IPR012340 Nucleic acid-binding, OB-fold CJO35_09300 IPR009019 K homology domain superfamily, prokaryotic type CJO35_09300 IPR013735 Transcription factor NusA, N-terminal CJO35_09300 IPR025249 KH domain, NusA-like CJO35_09300 IPR030842 Transcription termination/antitermination protein NusA, bacterial CJO35_09300 IPR015946 K homology domain-like, alpha/beta CJO35_09300 IPR010213 Transcription termination factor NusA CJO35_09300 IPR004087 K Homology domain CJO35_09300 IPR022967 RNA-binding domain, S1 CJO35_09300 IPR036555 NusA, N-terminal domain superfamily CJO35_09300 IPR003029 S1 domain CJO35_09305 IPR007393 Domain of unknown function DUF448 CJO35_09305 IPR037465 Uncharacterized protein YlxR CJO35_09305 IPR035931 YlxR-like superfamily CJO35_09310 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CJO35_09310 IPR039107 Ribosomal protein YlxQ CJO35_09310 IPR004037 Ribosomal protein L7Ae conserved site CJO35_09310 IPR029064 50S ribosomal protein L30e-like CJO35_09310 IPR039109 Ribosomal protein L30/YlxQ CJO35_09315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09315 IPR006847 Translation initiation factor IF-2, N-terminal CJO35_09315 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CJO35_09315 IPR005225 Small GTP-binding protein domain CJO35_09315 IPR000795 Transcription factor, GTP-binding domain CJO35_09315 IPR000178 Translation initiation factor aIF-2, bacterial-like CJO35_09315 IPR023115 Translation initiation factor IF- 2, domain 3 CJO35_09315 IPR009000 Translation protein, beta-barrel domain superfamily CJO35_09315 IPR015760 Translation initiation factor IF- 2 CJO35_09320 IPR036746 TT1725-like superfamily CJO35_09320 IPR007546 Protein of unknown function DUF503 CJO35_09325 IPR015946 K homology domain-like, alpha/beta CJO35_09325 IPR000238 Ribosome-binding factor A CJO35_09325 IPR023799 Ribosome-binding factor A domain superfamily CJO35_09325 IPR020053 Ribosome-binding factor A, conserved site CJO35_09330 IPR014780 tRNA pseudouridine synthase II, TruB CJO35_09330 IPR032819 tRNA pseudouridylate synthase B, C-terminal CJO35_09330 IPR002501 Pseudouridine synthase II, N-terminal CJO35_09330 IPR020103 Pseudouridine synthase, catalytic domain superfamily CJO35_09335 IPR015864 FAD synthetase CJO35_09335 IPR023468 Riboflavin kinase CJO35_09335 IPR002606 Riboflavin kinase, bacterial CJO35_09335 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CJO35_09335 IPR023465 Riboflavin kinase domain superfamily CJO35_09335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_09335 IPR004821 Cytidyltransferase-like domain CJO35_09340 IPR009068 S15/NS1, RNA-binding CJO35_09340 IPR000589 Ribosomal protein S15 CJO35_09340 IPR005290 Ribosomal protein S15, bacterial-type CJO35_09345 IPR036612 K Homology domain, type 1 superfamily CJO35_09345 IPR012340 Nucleic acid-binding, OB-fold CJO35_09345 IPR012162 Polyribonucleotide nucleotidyltransferase CJO35_09345 IPR015847 Exoribonuclease, phosphorolytic domain 2 CJO35_09345 IPR027408 PNPase/RNase PH domain superfamily CJO35_09345 IPR036345 Exoribonuclease, PH domain 2 superfamily CJO35_09345 IPR004088 K Homology domain, type 1 CJO35_09345 IPR004087 K Homology domain CJO35_09345 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CJO35_09345 IPR001247 Exoribonuclease, phosphorolytic domain 1 CJO35_09345 IPR003029 S1 domain CJO35_09345 IPR022967 RNA-binding domain, S1 CJO35_09345 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_09350 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_09350 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY CJO35_09350 IPR010916 TonB box, conserved site CJO35_09350 IPR002509 NodB homology domain CJO35_09355 IPR011765 Peptidase M16, N-terminal CJO35_09355 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CJO35_09355 IPR007863 Peptidase M16, C-terminal CJO35_09355 IPR001431 Peptidase M16, zinc-binding site CJO35_09360 IPR014238 Sporulation protein YlmC/YmxH CJO35_09360 IPR011033 PRC-barrel-like superfamily CJO35_09360 IPR027275 PRC-barrel domain CJO35_09365 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CJO35_09365 IPR014215 Dipicolinic acid synthetase subunit A CJO35_09365 IPR036291 NAD(P)-binding domain superfamily CJO35_09365 IPR031629 Dipicolinate synthase subunit A, N-terminal CJO35_09370 IPR014214 Dipicolinic acid synthetase, subunit B CJO35_09370 IPR036551 Flavin prenyltransferase-like CJO35_09370 IPR003382 Flavoprotein CJO35_09375 IPR012080 Aspartate-semialdehyde dehydrogenase CJO35_09375 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CJO35_09375 IPR000534 Semialdehyde dehydrogenase, NAD-binding CJO35_09375 IPR036291 NAD(P)-binding domain superfamily CJO35_09375 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CJO35_09375 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CJO35_09380 IPR001341 Aspartate kinase CJO35_09380 IPR002912 ACT domain CJO35_09380 IPR018042 Aspartate kinase, conserved site CJO35_09380 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_09380 IPR027795 CASTOR, ACT domain CJO35_09380 IPR005260 Aspartate kinase, monofunctional class CJO35_09380 IPR036393 Acetylglutamate kinase-like superfamily CJO35_09385 IPR020625 Schiff base-forming aldolase, active site CJO35_09385 IPR002220 DapA-like CJO35_09385 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CJO35_09385 IPR013785 Aldolase-type TIM barrel CJO35_09385 IPR020624 Schiff base-forming aldolase, conserved site CJO35_09390 IPR030854 Ribonuclease J, bacteria CJO35_09390 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_09390 IPR041636 Ribonuclease J, C-terminal CJO35_09390 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CJO35_09390 IPR042173 Ribonuclease J, domain 2 CJO35_09390 IPR001279 Metallo-beta-lactamase CJO35_09390 IPR004613 Ribonuclease J CJO35_09395 IPR029045 ClpP/crotonase-like domain superfamily CJO35_09395 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJO35_09400 IPR025619 YlzJ-like protein CJO35_09405 IPR041027 FtsK alpha domain CJO35_09405 IPR002543 FtsK domain CJO35_09405 IPR018541 FtsK gamma domain CJO35_09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09405 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_09405 IPR036390 Winged helix DNA-binding domain superfamily CJO35_09405 IPR003593 AAA+ ATPase domain CJO35_09410 IPR000524 Transcription regulator HTH, GntR CJO35_09410 IPR011663 UbiC transcription regulator-associated CJO35_09410 IPR036390 Winged helix DNA-binding domain superfamily CJO35_09410 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_09410 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CJO35_09415 IPR020846 Major facilitator superfamily domain CJO35_09415 IPR036259 MFS transporter superfamily CJO35_09415 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_09415 IPR011701 Major facilitator superfamily CJO35_09420 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CJO35_09420 IPR007863 Peptidase M16, C-terminal CJO35_09425 IPR011765 Peptidase M16, N-terminal CJO35_09425 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CJO35_09425 IPR007863 Peptidase M16, C-terminal CJO35_09430 IPR036291 NAD(P)-binding domain superfamily CJO35_09430 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_09435 IPR024702 Uncharacterised conserved protein YmfJ CJO35_09435 IPR021637 Protein of unknown function DUF3243 CJO35_09435 IPR038292 YmfJ/YflH superfamily CJO35_09440 IPR002912 ACT domain CJO35_09440 IPR016784 Uncharacterised protein UCP021288 with ACT domain CJO35_09440 IPR024514 Domain of unknown function DUF3388 CJO35_09445 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_09445 IPR025194 Domain of unknown function DUF4115 CJO35_09450 IPR000462 CDP-alcohol phosphatidyltransferase CJO35_09450 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CJO35_09455 IPR001453 MoaB/Mog domain CJO35_09455 IPR036425 MoaB/Mog-like domain superfamily CJO35_09455 IPR008135 Competence-induced protein CinA CJO35_09455 IPR041424 CinA, KH domain CJO35_09455 IPR008136 CinA, C-terminal CJO35_09455 IPR036653 CinA-like, C-terminal CJO35_09460 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CJO35_09460 IPR023400 DNA recombination and repair protein RecA, C-terminal CJO35_09460 IPR013765 DNA recombination and repair protein RecA CJO35_09460 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CJO35_09460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09460 IPR020584 DNA recombination/repair protein RecA, conserved site CJO35_09460 IPR003593 AAA+ ATPase domain CJO35_09465 IPR006674 HD domain CJO35_09465 IPR006675 HDIG domain CJO35_09465 IPR017705 Ribonuclease Y CJO35_09465 IPR022711 Ribonuclease Y, N-terminal CJO35_09465 IPR004087 K Homology domain CJO35_09465 IPR004088 K Homology domain, type 1 CJO35_09465 IPR003607 HD/PDEase domain CJO35_09465 IPR036612 K Homology domain, type 1 superfamily CJO35_09470 IPR005235 Metallophosphoesterase, YmdB-like CJO35_09470 IPR029052 Metallo-dependent phosphatase-like CJO35_09475 IPR007347 Sporulation stage V, protein S CJO35_09475 IPR036882 Alba-like domain superfamily CJO35_09480 IPR008257 Peptidase M19 CJO35_09480 IPR032466 Metal-dependent hydrolase CJO35_09485 IPR013149 Alcohol dehydrogenase, C-terminal CJO35_09485 IPR036291 NAD(P)-binding domain superfamily CJO35_09485 IPR013154 Alcohol dehydrogenase, N-terminal CJO35_09485 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CJO35_09485 IPR011032 GroES-like superfamily CJO35_09485 IPR004627 L-threonine 3-dehydrogenase CJO35_09485 IPR020843 Polyketide synthase, enoylreductase domain CJO35_09490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_09490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_09490 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_09490 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CJO35_09490 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type CJO35_09490 IPR004839 Aminotransferase, class I/classII CJO35_09490 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CJO35_09495 IPR020612 Methylthiotransferase, conserved site CJO35_09495 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CJO35_09495 IPR038135 Methylthiotransferase, N-terminal domain superfamily CJO35_09495 IPR013848 Methylthiotransferase, N-terminal CJO35_09495 IPR007197 Radical SAM CJO35_09495 IPR006638 Elp3/MiaB/NifB CJO35_09495 IPR005839 Methylthiotransferase CJO35_09495 IPR002792 TRAM domain CJO35_09495 IPR023404 Radical SAM, alpha/beta horseshoe CJO35_09500 IPR023378 YheA/YmcA-like domain superfamily CJO35_09500 IPR010368 Control of competence regulator ComK, YlbF/YmcA CJO35_09500 IPR016783 Biofilm formation YmcA CJO35_09505 IPR018901 Spore coat protein CotE CJO35_09510 IPR036678 MutS, connector domain superfamily CJO35_09510 IPR007696 DNA mismatch repair protein MutS, core CJO35_09510 IPR007860 DNA mismatch repair protein MutS, connector domain CJO35_09510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09510 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CJO35_09510 IPR007861 DNA mismatch repair protein MutS, clamp CJO35_09510 IPR016151 DNA mismatch repair protein MutS, N-terminal CJO35_09510 IPR000432 DNA mismatch repair protein MutS, C-terminal CJO35_09510 IPR017261 DNA mismatch repair protein MutS/MSH CJO35_09510 IPR005748 DNA mismatch repair protein MutS CJO35_09510 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CJO35_09515 IPR013507 DNA mismatch repair protein, S5 domain 2-like CJO35_09515 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_09515 IPR014790 MutL, C-terminal, dimerisation CJO35_09515 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CJO35_09515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_09515 IPR037198 MutL, C-terminal domain superfamily CJO35_09515 IPR002099 DNA mismatch repair protein family, N-terminal CJO35_09515 IPR042120 MutL, C-terminal domain, dimerisation subdomain CJO35_09515 IPR020667 DNA mismatch repair protein, MutL CJO35_09515 IPR014762 DNA mismatch repair, conserved site CJO35_09515 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_09515 IPR042121 MutL, C-terminal domain, regulatory subdomain CJO35_09520 IPR007138 Antibiotic biosynthesis monooxygenase domain CJO35_09520 IPR011008 Dimeric alpha-beta barrel CJO35_09525 IPR006829 LXG domain CJO35_09525 IPR003615 HNH nuclease CJO35_09525 IPR027797 Pre-toxin TG domain CJO35_09545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09545 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CJO35_09545 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CJO35_09545 IPR036627 CobW-like, C-terminal domain superfamily CJO35_09550 IPR036249 Thioredoxin-like superfamily CJO35_09555 IPR016181 Acyl-CoA N-acyltransferase CJO35_09555 IPR000182 GNAT domain CJO35_09575 IPR010699 Protein of unknown function DUF1275 CJO35_09580 IPR023729 K(+)/H(+) antiporter NhaP2 CJO35_09580 IPR005170 Transporter-associated domain CJO35_09580 IPR030151 K(+)/H(+) antiporter NhaP CJO35_09580 IPR038770 Sodium/solute symporter superfamily CJO35_09580 IPR016169 FAD-binding, type PCMH, subdomain 2 CJO35_09580 IPR036318 FAD-binding, type PCMH-like superfamily CJO35_09580 IPR006153 Cation/H+ exchanger CJO35_09580 IPR006037 Regulator of K+ conductance, C-terminal CJO35_09580 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CJO35_09585 IPR011701 Major facilitator superfamily CJO35_09585 IPR020846 Major facilitator superfamily domain CJO35_09585 IPR036259 MFS transporter superfamily CJO35_09590 IPR036259 MFS transporter superfamily CJO35_09590 IPR011701 Major facilitator superfamily CJO35_09590 IPR020846 Major facilitator superfamily domain CJO35_09595 IPR011701 Major facilitator superfamily CJO35_09595 IPR020846 Major facilitator superfamily domain CJO35_09595 IPR036259 MFS transporter superfamily CJO35_09600 IPR029058 Alpha/Beta hydrolase fold CJO35_09600 IPR000073 Alpha/beta hydrolase fold-1 CJO35_09605 IPR000073 Alpha/beta hydrolase fold-1 CJO35_09605 IPR029058 Alpha/Beta hydrolase fold CJO35_09615 IPR035439 UPF0145 domain superfamily CJO35_09615 IPR002765 Uncharacterised protein family UPF0145 CJO35_09620 IPR032816 SNARE associated Golgi protein CJO35_09620 IPR015414 Transmembrane protein TMEM64 CJO35_09625 IPR012338 Beta-lactamase/transpeptidase-like CJO35_09625 IPR021860 Peptidase S12, Pab87-related, C-terminal CJO35_09625 IPR001466 Beta-lactamase-related CJO35_09630 IPR006326 UDP-glycosyltransferase, MGT CJO35_09630 IPR007235 Glycosyl transferase, family 28, C-terminal CJO35_09635 IPR002293 Amino acid/polyamine transporter I CJO35_09640 IPR012851 Spore coat protein CotF-like CJO35_09645 IPR012851 Spore coat protein CotF-like CJO35_09650 IPR018392 LysM domain CJO35_09650 IPR017853 Glycoside hydrolase superfamily CJO35_09650 IPR041704 CFLE, GH18 catalytic domain CJO35_09650 IPR029070 Chitinase insertion domain superfamily CJO35_09650 IPR011583 Chitinase II CJO35_09650 IPR001223 Glycoside hydrolase family 18, catalytic domain CJO35_09650 IPR036779 LysM domain superfamily CJO35_09655 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_09655 IPR001647 DNA-binding HTH domain, TetR-type CJO35_09655 IPR009057 Homeobox-like domain superfamily CJO35_09660 IPR032710 NTF2-like domain superfamily CJO35_09660 IPR037401 SnoaL-like domain CJO35_09665 IPR001509 NAD-dependent epimerase/dehydratase CJO35_09665 IPR036291 NAD(P)-binding domain superfamily CJO35_09675 IPR015946 K homology domain-like, alpha/beta CJO35_09675 IPR036102 OsmC/Ohr superfamily CJO35_09675 IPR003718 OsmC/Ohr family CJO35_09675 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes CJO35_09680 IPR000390 Small multidrug resistance protein family CJO35_09685 IPR000390 Small multidrug resistance protein family CJO35_09695 IPR024307 YmaF CJO35_09700 IPR039657 Dimethylallyltransferase CJO35_09700 IPR018022 IPP transferase CJO35_09700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09705 IPR010920 LSM domain superfamily CJO35_09705 IPR005001 RNA-binding protein Hfq CJO35_09720 IPR029039 Flavoprotein-like superfamily CJO35_09720 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CJO35_09720 IPR004465 Ribonucleotide reductase Class Ib, NrdI CJO35_09725 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CJO35_09725 IPR013346 Ribonucleotide reductase, class I , alpha subunit CJO35_09725 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE CJO35_09725 IPR000788 Ribonucleotide reductase large subunit, C-terminal CJO35_09725 IPR013509 Ribonucleotide reductase large subunit, N-terminal CJO35_09725 IPR039718 Ribonucleoside-diphosphate reductase large subunit CJO35_09725 IPR013554 Ribonucleotide reductase N-terminal CJO35_09730 IPR009078 Ferritin-like superfamily CJO35_09730 IPR026494 Ribonucleoside reductase subunit beta, NrdF CJO35_09730 IPR033909 Ribonucleotide reductase small subunit CJO35_09730 IPR030475 Ribonucleotide reductase small subunit, acitve site CJO35_09730 IPR012348 Ribonucleotide reductase-like CJO35_09730 IPR000358 Ribonucleotide reductase small subunit family CJO35_09735 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_09740 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_09740 IPR001279 Metallo-beta-lactamase CJO35_09745 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CJO35_09750 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_09750 IPR036390 Winged helix DNA-binding domain superfamily CJO35_09750 IPR002481 Ferric-uptake regulator CJO35_09755 IPR000485 AsnC-type HTH domain CJO35_09755 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_09755 IPR000524 Transcription regulator HTH, GntR CJO35_09755 IPR011711 GntR, C-terminal CJO35_09755 IPR036390 Winged helix DNA-binding domain superfamily CJO35_09755 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_09760 IPR032713 Putative multidrug resistance efflux transporter CJO35_09765 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CJO35_09765 IPR007730 Sporulation-like domain CJO35_09765 IPR036680 Sporulation-like domain superfamily CJO35_09795 IPR001647 DNA-binding HTH domain, TetR-type CJO35_09795 IPR009057 Homeobox-like domain superfamily CJO35_09795 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_09810 IPR002821 Hydantoinase A/oxoprolinase CJO35_09810 IPR008040 Hydantoinaseoxoprolinase, N-terminal CJO35_09820 IPR003692 Hydantoinase B/oxoprolinase CJO35_09850 IPR003593 AAA+ ATPase domain CJO35_09850 IPR041627 CbbX, AAA lid domain CJO35_09850 IPR003959 ATPase, AAA-type, core CJO35_09850 IPR000641 CbxX/CfxQ CJO35_09850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09850 IPR014232 Sporulation stage V, protein K CJO35_09855 IPR042108 GTPase HflX, N-terminal domain superfamily CJO35_09855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_09855 IPR030394 HflX-type guanine nucleotide-binding (G) domain CJO35_09855 IPR006073 GTP binding domain CJO35_09855 IPR016496 GTPase HflX CJO35_09855 IPR025121 GTPase HflX, N-terminal CJO35_09855 IPR032305 GTP-binding protein, middle domain CJO35_09860 IPR009651 Putative methionine gamma-lyase CJO35_09860 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_09860 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_09865 IPR009061 Putative DNA-binding domain superfamily CJO35_09865 IPR000551 MerR-type HTH domain CJO35_09870 IPR008146 Glutamine synthetase, catalytic domain CJO35_09870 IPR027303 Glutamine synthetase, glycine-rich site CJO35_09870 IPR001637 Glutamine synthetase class-I, adenylation site CJO35_09870 IPR027302 Glutamine synthetase, N-terminal conserved site CJO35_09870 IPR004809 Glutamine synthetase type I CJO35_09870 IPR036651 Glutamine synthetase, N-terminal domain superfamily CJO35_09870 IPR008147 Glutamine synthetase, beta-Grasp domain CJO35_09870 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CJO35_09900 IPR036265 HIT-like superfamily CJO35_09900 IPR001310 Histidine triad (HIT) protein CJO35_09900 IPR011146 HIT-like domain CJO35_09900 IPR039384 HINT family CJO35_09900 IPR019808 Histidine triad, conserved site CJO35_09915 IPR029058 Alpha/Beta hydrolase fold CJO35_09935 IPR032545 Protein of unknown function DUF4944 CJO35_09955 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_09955 IPR001647 DNA-binding HTH domain, TetR-type CJO35_09955 IPR041603 YvdT, C-terminal CJO35_09955 IPR009057 Homeobox-like domain superfamily CJO35_09960 IPR000390 Small multidrug resistance protein family CJO35_09965 IPR000390 Small multidrug resistance protein family CJO35_09970 IPR016181 Acyl-CoA N-acyltransferase CJO35_09970 IPR000182 GNAT domain CJO35_09985 IPR036249 Thioredoxin-like superfamily CJO35_09985 IPR013740 Redoxin CJO35_09985 IPR013766 Thioredoxin domain CJO35_09985 IPR017937 Thioredoxin, conserved site CJO35_09990 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain CJO35_09990 IPR027407 Manganese catalase, C-terminal CJO35_09990 IPR012347 Ferritin-like CJO35_09990 IPR009078 Ferritin-like superfamily CJO35_09990 IPR007760 Manganese catalase CJO35_10010 IPR001647 DNA-binding HTH domain, TetR-type CJO35_10010 IPR009057 Homeobox-like domain superfamily CJO35_10010 IPR013571 Transcription regulator QacR, C-terminal CJO35_10010 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_10010 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_10015 IPR000835 MarR-type HTH domain CJO35_10015 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_10015 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10015 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10020 IPR029479 Nitroreductase CJO35_10020 IPR000415 Nitroreductase-like CJO35_10025 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_10025 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_10025 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_10030 IPR012349 FMN-binding split barrel CJO35_10030 IPR002563 Flavin reductase like domain CJO35_10035 IPR029039 Flavoprotein-like superfamily CJO35_10035 IPR010089 Flavoprotein WrbA-like CJO35_10035 IPR005025 NADPH-dependent FMN reductase-like CJO35_10035 IPR008254 Flavodoxin/nitric oxide synthase CJO35_10050 IPR020940 Thymidylate synthase, active site CJO35_10050 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CJO35_10050 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CJO35_10050 IPR000398 Thymidylate synthase CJO35_10055 IPR029476 Deoxyribonuclease NucA/NucB CJO35_10060 IPR015927 Peptidase S24/S26A/S26B/S26C CJO35_10060 IPR006199 LexA repressor, DNA-binding domain CJO35_10060 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10060 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10060 IPR006200 Transcription regulator LexA CJO35_10060 IPR006197 Peptidase S24, LexA-like CJO35_10060 IPR011991 ArsR-like helix-turn-helix domain CJO35_10060 IPR036286 LexA/Signal peptidase-like superfamily CJO35_10060 IPR039418 LexA-like CJO35_10065 IPR022887 Cell division suppressor protein, YneA CJO35_10065 IPR018392 LysM domain CJO35_10065 IPR036779 LysM domain superfamily CJO35_10070 IPR006119 Resolvase, N-terminal catalytic domain CJO35_10070 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CJO35_10075 IPR009242 Protein of unknown function DUF896 CJO35_10080 IPR005475 Transketolase-like, pyrimidine-binding domain CJO35_10080 IPR005478 Transketolase, bacterial-like CJO35_10080 IPR033247 Transketolase family CJO35_10080 IPR029061 Thiamin diphosphate-binding fold CJO35_10080 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CJO35_10080 IPR033248 Transketolase, C-terminal domain CJO35_10080 IPR020826 Transketolase binding site CJO35_10080 IPR005474 Transketolase, N-terminal CJO35_10085 IPR019683 Sporulation inhibitor of replication protein SirA CJO35_10085 IPR038449 SirA superfamily CJO35_10090 IPR005359 Protein with unknown function UPF0154 CJO35_10095 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like CJO35_10095 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily CJO35_10100 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CJO35_10105 IPR011006 CheY-like superfamily CJO35_10105 IPR001789 Signal transduction response regulator, receiver domain CJO35_10110 IPR031306 CcdC protein CJO35_10115 IPR020203 Uncharacterised protein family, YneK CJO35_10120 IPR008978 HSP20-like chaperone CJO35_10125 IPR012614 Small acid-soluble spore protein, SspP CJO35_10130 IPR012613 Small acid-soluble spore protein, SspO CJO35_10135 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CJO35_10135 IPR036008 Aconitase, iron-sulfur domain CJO35_10135 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CJO35_10135 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJO35_10135 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CJO35_10135 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CJO35_10135 IPR018136 Aconitase family, 4Fe-4S cluster binding site CJO35_10140 IPR036249 Thioredoxin-like superfamily CJO35_10140 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CJO35_10140 IPR013766 Thioredoxin domain CJO35_10145 IPR025004 Transcriptional regulatory protein SenN/SenS CJO35_10150 IPR012612 Small acid-soluble spore protein, SspN CJO35_10155 IPR017524 Small acid-soluble spore protein, thioredoxin-like CJO35_10160 IPR006683 Thioesterase domain CJO35_10160 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CJO35_10160 IPR029069 HotDog domain superfamily CJO35_10185 IPR008326 Uncharacterised conserved protein UCP034852 CJO35_10185 IPR000361 FeS cluster biogenesis CJO35_10185 IPR035903 HesB-like domain superfamily CJO35_10190 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CJO35_10195 IPR036291 NAD(P)-binding domain superfamily CJO35_10195 IPR003781 CoA-binding CJO35_10200 IPR018522 DNA topoisomerase, type IIA, conserved site CJO35_10200 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes CJO35_10200 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CJO35_10200 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CJO35_10200 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CJO35_10200 IPR002288 DNA gyrase B subunit, C-terminal CJO35_10200 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_10200 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_10200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_10200 IPR006171 TOPRIM domain CJO35_10200 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_10200 IPR001241 DNA topoisomerase, type IIA CJO35_10205 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CJO35_10205 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CJO35_10205 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CJO35_10205 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CJO35_10205 IPR005741 DNA topoisomerase IV subunit A, Gram-positive CJO35_10205 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CJO35_10205 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CJO35_10210 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain CJO35_10210 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10210 IPR000524 Transcription regulator HTH, GntR CJO35_10210 IPR028082 Periplasmic binding protein-like I CJO35_10210 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10220 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CJO35_10220 IPR001303 Class II aldolase/adducin N-terminal CJO35_10220 IPR004661 L-ribulose-5-phosphate 4-epimerase CJO35_10225 IPR003762 L-arabinose isomerase CJO35_10225 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CJO35_10225 IPR038583 L-arabinose isomerase, N-terminal domain superfamily CJO35_10225 IPR024664 L-arabinose isomerase, C-terminal CJO35_10225 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily CJO35_10230 IPR020846 Major facilitator superfamily domain CJO35_10230 IPR005829 Sugar transporter, conserved site CJO35_10230 IPR003663 Sugar/inositol transporter CJO35_10230 IPR036259 MFS transporter superfamily CJO35_10230 IPR005828 Major facilitator, sugar transporter-like CJO35_10235 IPR014007 Acetoin reductase CJO35_10235 IPR036291 NAD(P)-binding domain superfamily CJO35_10235 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_10235 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_10245 IPR001463 Sodium:alanine symporter CJO35_10255 IPR023234 NarG-like domain CJO35_10255 IPR036197 NarG-like superfamily CJO35_10255 IPR003816 Nitrate reductase, gamma subunit CJO35_10260 IPR020945 DMSO/Nitrate reductase chaperone CJO35_10260 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 CJO35_10260 IPR003765 Nitrate reductase chaperone, NarJ CJO35_10260 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 CJO35_10260 IPR036411 TorD-like superfamily CJO35_10265 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_10265 IPR006547 Nitrate reductase, beta subunit CJO35_10265 IPR029263 Respiratory nitrate reductase beta, C-terminal CJO35_10265 IPR038262 Nitrate reductase beta, C-terminal domain superfamily CJO35_10270 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CJO35_10270 IPR037943 Nitrate reductase alpha subunit-like, MopB domain CJO35_10270 IPR006656 Molybdopterin oxidoreductase CJO35_10270 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CJO35_10270 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CJO35_10270 IPR006468 Nitrate reductase, alpha subunit CJO35_10270 IPR028189 Nitrate reductase, alpha subunit, N-terminal CJO35_10270 IPR009010 Aspartate decarboxylase-like domain superfamily CJO35_10270 IPR006657 Molybdopterin dinucleotide-binding domain CJO35_10285 IPR006638 Elp3/MiaB/NifB CJO35_10285 IPR013785 Aldolase-type TIM barrel CJO35_10285 IPR007197 Radical SAM CJO35_10285 IPR013483 Molybdenum cofactor biosynthesis protein A CJO35_10285 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CJO35_10285 IPR010505 Molybdenum cofactor synthesis C-terminal CJO35_10290 IPR018490 Cyclic nucleotide-binding-like CJO35_10290 IPR014710 RmlC-like jelly roll fold CJO35_10295 IPR025576 YwiC-like protein CJO35_10300 IPR014710 RmlC-like jelly roll fold CJO35_10300 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10300 IPR000595 Cyclic nucleotide-binding domain CJO35_10300 IPR018490 Cyclic nucleotide-binding-like CJO35_10300 IPR018335 Transcription regulator HTH, Crp-type, conserved site CJO35_10300 IPR012318 Crp-type HTH domain CJO35_10300 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10305 IPR020846 Major facilitator superfamily domain CJO35_10305 IPR011701 Major facilitator superfamily CJO35_10305 IPR036259 MFS transporter superfamily CJO35_10315 IPR018490 Cyclic nucleotide-binding-like CJO35_10315 IPR012318 Crp-type HTH domain CJO35_10315 IPR014710 RmlC-like jelly roll fold CJO35_10315 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10315 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10315 IPR000595 Cyclic nucleotide-binding domain CJO35_10320 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CJO35_10320 IPR000883 Cytochrome c oxidase subunit I CJO35_10320 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CJO35_10320 IPR023616 Cytochrome c oxidase-like, subunit I domain CJO35_10325 IPR019903 Repair of iron centres family CJO35_10325 IPR012312 Haemerythrin-like CJO35_10330 IPR010773 Mycobacterium phage PG1, Gp7 CJO35_10335 IPR017853 Glycoside hydrolase superfamily CJO35_10335 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily CJO35_10335 IPR018087 Glycoside hydrolase, family 5, conserved site CJO35_10335 IPR001547 Glycoside hydrolase, family 5 CJO35_10335 IPR001956 Carbohydrate-binding module 3 CJO35_10335 IPR036966 Carbohydrate-binding module 3 superfamily CJO35_10340 IPR020302 Uncharacterized YnfE-like CJO35_10345 IPR016181 Acyl-CoA N-acyltransferase CJO35_10345 IPR000182 GNAT domain CJO35_10370 IPR039448 Right handed beta helix domain CJO35_10370 IPR006633 Carbohydrate-binding/sugar hydrolysis domain CJO35_10370 IPR006626 Parallel beta-helix repeat CJO35_10370 IPR011050 Pectin lyase fold/virulence factor CJO35_10370 IPR012334 Pectin lyase fold CJO35_10375 IPR004685 Branched-chain amino acid transport system II carrier protein CJO35_10385 IPR009061 Putative DNA-binding domain superfamily CJO35_10385 IPR000551 MerR-type HTH domain CJO35_10395 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D CJO35_10395 IPR001279 Metallo-beta-lactamase CJO35_10395 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_10410 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CJO35_10410 IPR029045 ClpP/crotonase-like domain superfamily CJO35_10410 IPR001753 Enoyl-CoA hydratase/isomerase CJO35_10415 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria CJO35_10415 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_10415 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_10415 IPR016160 Aldehyde dehydrogenase, cysteine active site CJO35_10415 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_10415 IPR015590 Aldehyde dehydrogenase domain CJO35_10415 IPR010061 Methylmalonate-semialdehyde dehydrogenase CJO35_10420 IPR006398 2-hydroxy-3-oxopropionate reductase CJO35_10420 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CJO35_10420 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CJO35_10420 IPR036291 NAD(P)-binding domain superfamily CJO35_10420 IPR015815 3-hydroxyisobutyrate dehydrogenase-related CJO35_10420 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_10420 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_10420 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CJO35_10425 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CJO35_10425 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CJO35_10425 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CJO35_10425 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CJO35_10425 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CJO35_10425 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CJO35_10425 IPR006089 Acyl-CoA dehydrogenase, conserved site CJO35_10430 IPR001250 Mannose-6-phosphate isomerase, type I CJO35_10430 IPR011051 RmlC-like cupin domain superfamily CJO35_10430 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form CJO35_10430 IPR014710 RmlC-like jelly roll fold CJO35_10435 IPR016152 Phosphotransferase/anion transporter CJO35_10435 IPR036095 PTS system IIB component-like superfamily CJO35_10435 IPR013011 Phosphotransferase system, EIIB component, type 2 CJO35_10435 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_10435 IPR002178 PTS EIIA type-2 domain CJO35_10435 IPR013014 Phosphotransferase system, EIIC component, type 2 CJO35_10435 IPR004715 Phosphotransferase system, IIA component fructose subfamily CJO35_10435 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CJO35_10435 IPR006327 Phosphotransferase system, fructose IIC component CJO35_10435 IPR003352 Phosphotransferase system, EIIC CJO35_10455 IPR007737 Mga helix-turn-helix domain CJO35_10455 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10455 IPR013011 Phosphotransferase system, EIIB component, type 2 CJO35_10455 IPR036095 PTS system IIB component-like superfamily CJO35_10455 IPR002178 PTS EIIA type-2 domain CJO35_10455 IPR016152 Phosphotransferase/anion transporter CJO35_10455 IPR011608 PRD domain CJO35_10455 IPR013196 Helix-turn-helix, type 11 CJO35_10455 IPR036634 PRD domain superfamily CJO35_10465 IPR017871 ABC transporter, conserved site CJO35_10465 IPR003439 ABC transporter-like CJO35_10465 IPR003593 AAA+ ATPase domain CJO35_10465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_10470 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10470 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10470 IPR000524 Transcription regulator HTH, GntR CJO35_10475 IPR036291 NAD(P)-binding domain superfamily CJO35_10475 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_10475 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_10480 IPR036237 Xylose isomerase-like superfamily CJO35_10480 IPR004628 Mannonate dehydratase CJO35_10485 IPR013780 Glycosyl hydrolase, all-beta CJO35_10485 IPR025887 Glycoside hydrolase family 31, N-terminal domain CJO35_10485 IPR030459 Glycosyl hydrolases family 31, conserved site CJO35_10485 IPR017853 Glycoside hydrolase superfamily CJO35_10485 IPR000322 Glycoside hydrolase family 31 CJO35_10485 IPR011013 Galactose mutarotase-like domain superfamily CJO35_10485 IPR033403 Domain of unknown function DUF5110 CJO35_10485 IPR030458 Glycosyl hydrolases family 31, active site CJO35_10485 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 CJO35_10490 IPR004681 TRAP transporter large membrane protein DctM CJO35_10490 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CJO35_10495 IPR007387 TRAP transporter, small membrane protein DctQ CJO35_10500 IPR038404 TRAP transporter solute receptor DctP superfamily CJO35_10500 IPR018389 TRAP transporter solute receptor DctP/TeaA CJO35_10500 IPR004682 TRAP transporter solute receptor, DctP family CJO35_10505 IPR028082 Periplasmic binding protein-like I CJO35_10505 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_10505 IPR000843 LacI-type HTH domain CJO35_10510 IPR036196 Phosphotyrosine protein phosphatase I superfamily CJO35_10510 IPR014064 Arsenate reductase ArsC CJO35_10510 IPR023485 Phosphotyrosine protein phosphatase I CJO35_10515 IPR000802 Arsenical pump membrane protein, ArsB CJO35_10520 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10520 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10520 IPR001845 HTH ArsR-type DNA-binding domain CJO35_10520 IPR011991 ArsR-like helix-turn-helix domain CJO35_10530 IPR014922 Domain of unknown function DUF1801 CJO35_10530 IPR016786 Uncharacterised protein YdeI, bacterial CJO35_10540 IPR010651 Sugar transport protein CJO35_10545 IPR003790 Glycosyl hydrolase-like 10 CJO35_10545 IPR013785 Aldolase-type TIM barrel CJO35_10545 IPR013783 Immunoglobulin-like fold CJO35_10545 IPR017853 Glycoside hydrolase superfamily CJO35_10550 IPR038763 DHH phosphoesterase superfamily CJO35_10555 IPR007197 Radical SAM CJO35_10555 IPR012838 Pyruvate formate-lyase 1 activating enzyme CJO35_10555 IPR034465 Pyruvate formate-lyase activase CJO35_10555 IPR012839 Organic radical enzyme activase CJO35_10555 IPR034457 Organic radical-activating enzymes CJO35_10555 IPR013785 Aldolase-type TIM barrel CJO35_10555 IPR001989 Radical-activating enzyme, conserved site CJO35_10560 IPR005949 Formate acetyltransferase CJO35_10560 IPR004184 Pyruvate formate lyase domain CJO35_10560 IPR001150 Glycine radical domain CJO35_10560 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CJO35_10565 IPR012338 Beta-lactamase/transpeptidase-like CJO35_10565 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C CJO35_10570 IPR023753 FAD/NAD(P)-binding domain CJO35_10570 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_10575 IPR012440 Protein of unknown function DUF1641 CJO35_10585 IPR041657 Helix-turn-helix domain, group 17 CJO35_10585 IPR010093 SinI-like, DNA-binding domain CJO35_10595 IPR000873 AMP-dependent synthetase/ligase CJO35_10595 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain CJO35_10595 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_10595 IPR042099 AMP-dependent synthetase-like superfamily CJO35_10595 IPR020845 AMP-binding, conserved site CJO35_10595 IPR011904 Acetate-CoA ligase CJO35_10600 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CJO35_10600 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CJO35_10600 IPR034733 Acetyl-CoA carboxylase CJO35_10600 IPR029045 ClpP/crotonase-like domain superfamily CJO35_10605 IPR029045 ClpP/crotonase-like domain superfamily CJO35_10605 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CJO35_10605 IPR001753 Enoyl-CoA hydratase/isomerase CJO35_10605 IPR014748 Enoyl-CoA hydratase, C-terminal CJO35_10610 IPR013785 Aldolase-type TIM barrel CJO35_10610 IPR000891 Pyruvate carboxyltransferase CJO35_10615 IPR000089 Biotin/lipoyl attachment CJO35_10615 IPR011053 Single hybrid motif CJO35_10620 IPR011761 ATP-grasp fold CJO35_10620 IPR013815 ATP-grasp fold, subdomain 1 CJO35_10620 IPR011054 Rudiment single hybrid motif CJO35_10620 IPR005481 Biotin carboxylase-like, N-terminal domain CJO35_10620 IPR011764 Biotin carboxylation domain CJO35_10620 IPR005482 Biotin carboxylase, C-terminal CJO35_10620 IPR016185 Pre-ATP-grasp domain superfamily CJO35_10620 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CJO35_10625 IPR000873 AMP-dependent synthetase/ligase CJO35_10625 IPR020845 AMP-binding, conserved site CJO35_10625 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_10630 IPR006089 Acyl-CoA dehydrogenase, conserved site CJO35_10630 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CJO35_10630 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CJO35_10630 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CJO35_10630 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CJO35_10630 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CJO35_10630 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CJO35_10635 IPR003680 Flavodoxin-like fold CJO35_10635 IPR029039 Flavoprotein-like superfamily CJO35_10640 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10640 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10640 IPR002577 Helix-turn-helix, HxlR type CJO35_10640 IPR011991 ArsR-like helix-turn-helix domain CJO35_10645 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CJO35_10645 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_10645 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_10645 IPR015590 Aldehyde dehydrogenase domain CJO35_10645 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_10645 IPR000965 GPR domain CJO35_10645 IPR012134 Glutamate-5-semialdehyde dehydrogenase CJO35_10650 IPR002478 PUA domain CJO35_10650 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CJO35_10650 IPR011529 Glutamate 5-kinase CJO35_10650 IPR001057 Glutamate/acetylglutamate kinase CJO35_10650 IPR041739 Glutamate-5-kinase domain CJO35_10650 IPR015947 PUA-like superfamily CJO35_10650 IPR036393 Acetylglutamate kinase-like superfamily CJO35_10650 IPR036974 PUA domain superfamily CJO35_10650 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_10655 IPR000304 Pyrroline-5-carboxylate reductase CJO35_10655 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CJO35_10655 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_10655 IPR036291 NAD(P)-binding domain superfamily CJO35_10655 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CJO35_10660 IPR007353 Protein of unknown function DUF421 CJO35_10660 IPR023090 UPF0702, alpha/beta domain superfamily CJO35_10670 IPR001204 Phosphate transporter CJO35_10675 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CJO35_10675 IPR011798 Adenosine 5'-phosphosulphate reductase CJO35_10675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_10675 IPR002500 Phosphoadenosine phosphosulphate reductase CJO35_10680 IPR036112 (2R)-phospho-3-sulpholactate synthase, ComA superfamily CJO35_10680 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA CJO35_10680 IPR013785 Aldolase-type TIM barrel CJO35_10685 IPR003740 Uncharacterised membrane protein YitT CJO35_10690 IPR036849 Enolase-like, C-terminal domain superfamily CJO35_10690 IPR029017 Enolase-like, N-terminal CJO35_10690 IPR029065 Enolase C-terminal domain-like CJO35_10690 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CJO35_10690 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CJO35_10695 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_10695 IPR036259 MFS transporter superfamily CJO35_10695 IPR020846 Major facilitator superfamily domain CJO35_10695 IPR011701 Major facilitator superfamily CJO35_10700 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_10700 IPR001173 Glycosyltransferase 2-like CJO35_10715 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 CJO35_10715 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_10715 IPR023753 FAD/NAD(P)-binding domain CJO35_10715 IPR009051 Alpha-helical ferredoxin CJO35_10715 IPR028261 Dihydroprymidine dehydrogenase domain II CJO35_10720 IPR006982 Glutamate synthase, central-N CJO35_10720 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CJO35_10720 IPR002489 Glutamate synthase, alpha subunit, C-terminal CJO35_10720 IPR017932 Glutamine amidotransferase type 2 domain CJO35_10720 IPR013785 Aldolase-type TIM barrel CJO35_10720 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_10720 IPR002932 Glutamate synthase domain CJO35_10725 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10725 IPR000847 Transcription regulator HTH, LysR CJO35_10725 IPR005119 LysR, substrate-binding CJO35_10725 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10745 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10745 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10745 IPR000835 MarR-type HTH domain CJO35_10750 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_10750 IPR003439 ABC transporter-like CJO35_10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_10750 IPR039421 Type I protein exporter CJO35_10750 IPR003593 AAA+ ATPase domain CJO35_10750 IPR011527 ABC transporter type 1, transmembrane domain CJO35_10750 IPR017871 ABC transporter, conserved site CJO35_10755 IPR039421 Type I protein exporter CJO35_10755 IPR011527 ABC transporter type 1, transmembrane domain CJO35_10755 IPR003439 ABC transporter-like CJO35_10755 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_10755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_10755 IPR003593 AAA+ ATPase domain CJO35_10760 IPR002397 Cytochrome P450, B-class CJO35_10760 IPR017972 Cytochrome P450, conserved site CJO35_10760 IPR001128 Cytochrome P450 CJO35_10760 IPR036396 Cytochrome P450 superfamily CJO35_10765 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_10765 IPR036291 NAD(P)-binding domain superfamily CJO35_10765 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_10770 IPR013815 ATP-grasp fold, subdomain 1 CJO35_10770 IPR036637 Phosphohistidine domain superfamily CJO35_10770 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CJO35_10770 IPR008279 PEP-utilising enzyme, mobile domain CJO35_10780 IPR004638 Drug resistance transporter EmrB-like CJO35_10780 IPR011701 Major facilitator superfamily CJO35_10780 IPR036259 MFS transporter superfamily CJO35_10780 IPR020846 Major facilitator superfamily domain CJO35_10785 IPR006656 Molybdopterin oxidoreductase CJO35_10785 IPR006657 Molybdopterin dinucleotide-binding domain CJO35_10785 IPR009010 Aspartate decarboxylase-like domain superfamily CJO35_10785 IPR037920 Probable oxidoreductase YoaE, C-terminal CJO35_10785 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CJO35_10785 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CJO35_10790 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10790 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10790 IPR000835 MarR-type HTH domain CJO35_10790 IPR011991 ArsR-like helix-turn-helix domain CJO35_10800 IPR004761 Spore germination GerAB CJO35_10805 IPR008844 Spore germination GerAC CJO35_10805 IPR038501 Spore germination GerAC superfamily CJO35_10810 IPR004761 Spore germination GerAB CJO35_10815 IPR004761 Spore germination GerAB CJO35_10820 IPR004995 Bacillus/Clostridium Ger spore germination protein CJO35_10835 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CJO35_10835 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_10835 IPR029151 Periplasmic sensor-like domain superfamily CJO35_10835 IPR003660 HAMP domain CJO35_10835 IPR033479 Double Cache domain 1 CJO35_10840 IPR012340 Nucleic acid-binding, OB-fold CJO35_10840 IPR008231 Probable chaperone CsaA CJO35_10840 IPR002547 tRNA-binding domain CJO35_10845 IPR036852 Peptidase S8/S53 domain superfamily CJO35_10845 IPR015500 Peptidase S8, subtilisin-related CJO35_10845 IPR000209 Peptidase S8/S53 domain CJO35_10845 IPR023827 Peptidase S8, subtilisin, Asp-active site CJO35_10845 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_10845 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_10855 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal CJO35_10855 IPR001647 DNA-binding HTH domain, TetR-type CJO35_10855 IPR009057 Homeobox-like domain superfamily CJO35_10855 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_10860 IPR000835 MarR-type HTH domain CJO35_10860 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10860 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10860 IPR023187 Transcriptional regulator MarR-type, conserved site CJO35_10865 IPR003607 HD/PDEase domain CJO35_10865 IPR006674 HD domain CJO35_10875 IPR025450 YndJ-like protein CJO35_10880 IPR025311 Domain of unknown function DUF4166 CJO35_10890 IPR001647 DNA-binding HTH domain, TetR-type CJO35_10890 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_10890 IPR025996 Tetracyclin repressor-like, C-terminal domain (WHG) CJO35_10890 IPR009057 Homeobox-like domain superfamily CJO35_10910 IPR026881 WYL domain CJO35_10910 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10910 IPR013196 Helix-turn-helix, type 11 CJO35_10910 IPR028349 Protein PafC CJO35_10910 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10910 IPR001034 DeoR-type HTH domain CJO35_10920 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10920 IPR001845 HTH ArsR-type DNA-binding domain CJO35_10920 IPR011991 ArsR-like helix-turn-helix domain CJO35_10920 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10925 IPR001279 Metallo-beta-lactamase CJO35_10925 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_10935 IPR004841 Amino acid permease/ SLC12A domain CJO35_10940 IPR023346 Lysozyme-like domain superfamily CJO35_10945 IPR036291 NAD(P)-binding domain superfamily CJO35_10945 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) CJO35_10945 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CJO35_10960 IPR001296 Glycosyl transferase, family 1 CJO35_10965 IPR007352 Protein of unknown function DUF420 CJO35_10975 IPR016181 Acyl-CoA N-acyltransferase CJO35_10980 IPR018212 Sodium/solute symporter, conserved site CJO35_10980 IPR001734 Sodium/solute symporter CJO35_10980 IPR038377 Sodium/glucose symporter superfamily CJO35_10985 IPR036779 LysM domain superfamily CJO35_10985 IPR018392 LysM domain CJO35_10985 IPR010611 3D domain CJO35_10985 IPR036908 RlpA-like domain superfamily CJO35_10990 IPR010997 HRDC-like superfamily CJO35_10990 IPR011545 DEAD/DEAH box helicase domain CJO35_10990 IPR004589 DNA helicase, ATP-dependent, RecQ type CJO35_10990 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CJO35_10990 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_10990 IPR002121 HRDC domain CJO35_10990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_10990 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CJO35_10990 IPR018982 RQC domain CJO35_10990 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_10990 IPR036390 Winged helix DNA-binding domain superfamily CJO35_10990 IPR001650 Helicase, C-terminal CJO35_11030 IPR012440 Protein of unknown function DUF1641 CJO35_11035 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CJO35_11035 IPR036010 2Fe-2S ferredoxin-like superfamily CJO35_11035 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CJO35_11035 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CJO35_11035 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJO35_11035 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_11035 IPR006656 Molybdopterin oxidoreductase CJO35_11035 IPR006657 Molybdopterin dinucleotide-binding domain CJO35_11035 IPR006478 Formate dehydrogenase, alpha subunit CJO35_11035 IPR041924 Formate dehydrogenase H, N-terminal CJO35_11035 IPR009010 Aspartate decarboxylase-like domain superfamily CJO35_11060 IPR009875 PilZ domain CJO35_11060 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CJO35_11085 IPR025100 Protein of unknown function DUF4025 CJO35_11090 IPR038501 Spore germination GerAC superfamily CJO35_11090 IPR008844 Spore germination GerAC CJO35_11105 IPR006680 Amidohydrolase-related CJO35_11105 IPR023512 Deaminase MtaD/DadD CJO35_11105 IPR011059 Metal-dependent hydrolase, composite domain superfamily CJO35_11105 IPR032466 Metal-dependent hydrolase CJO35_11110 IPR020108 Spore coat protein CotD CJO35_11120 IPR029058 Alpha/Beta hydrolase fold CJO35_11120 IPR000073 Alpha/beta hydrolase fold-1 CJO35_11120 IPR000639 Epoxide hydrolase-like CJO35_11120 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal CJO35_11130 IPR020108 Spore coat protein CotD CJO35_11135 IPR001123 Amino acid exporter protein, LeuE-type CJO35_11135 IPR004778 Homoserine/Threonine efflux protein CJO35_11140 IPR023053 Ribosomal protein S14, type Z CJO35_11140 IPR018271 Ribosomal protein S14, conserved site CJO35_11140 IPR001209 Ribosomal protein S14 CJO35_11145 IPR000086 NUDIX hydrolase domain CJO35_11145 IPR036412 HAD-like superfamily CJO35_11145 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_11145 IPR020476 NUDIX hydrolase CJO35_11145 IPR023214 HAD superfamily CJO35_11145 IPR020084 NUDIX hydrolase, conserved site CJO35_11145 IPR006357 HAD-superfamily hydrolase, subfamily IIA CJO35_11150 IPR013815 ATP-grasp fold, subdomain 1 CJO35_11150 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CJO35_11150 IPR036637 Phosphohistidine domain superfamily CJO35_11150 IPR008279 PEP-utilising enzyme, mobile domain CJO35_11155 IPR001647 DNA-binding HTH domain, TetR-type CJO35_11155 IPR009057 Homeobox-like domain superfamily CJO35_11165 IPR019649 Protein of unknown function DUF2512 CJO35_11170 IPR034660 DinB/YfiT-like putative metalloenzymes CJO35_11170 IPR007837 DNA damage-inducible protein DinB CJO35_11175 IPR023048 NADH-azoreductase, FMN-dependent CJO35_11175 IPR029039 Flavoprotein-like superfamily CJO35_11175 IPR003680 Flavodoxin-like fold CJO35_11180 IPR000962 Zinc finger, DksA/TraR C4-type CJO35_11180 IPR037187 DksA, N-terminal domain superfamily CJO35_11180 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CJO35_11185 IPR037063 Bacterial Pleckstrin homology domain superfamily CJO35_11185 IPR012544 Bacterial Pleckstrin homology domain CJO35_11195 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_11195 IPR015590 Aldehyde dehydrogenase domain CJO35_11195 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_11195 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_11195 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CJO35_11195 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CJO35_11200 IPR011701 Major facilitator superfamily CJO35_11200 IPR036259 MFS transporter superfamily CJO35_11205 IPR011009 Protein kinase-like domain superfamily CJO35_11205 IPR000182 GNAT domain CJO35_11205 IPR002575 Aminoglycoside phosphotransferase CJO35_11205 IPR016181 Acyl-CoA N-acyltransferase CJO35_11215 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CJO35_11215 IPR018333 Squalene cyclase CJO35_11215 IPR032696 Squalene cyclase, C-terminal CJO35_11215 IPR032697 Squalene cyclase, N-terminal CJO35_11220 IPR019832 Manganese/iron superoxide dismutase, C-terminal CJO35_11220 IPR019831 Manganese/iron superoxide dismutase, N-terminal CJO35_11220 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CJO35_11220 IPR019833 Manganese/iron superoxide dismutase, binding site CJO35_11220 IPR001189 Manganese/iron superoxide dismutase CJO35_11220 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CJO35_11230 IPR037272 Sodium:neurotransmitter symporter superfamily CJO35_11230 IPR000175 Sodium:neurotransmitter symporter CJO35_11235 IPR038770 Sodium/solute symporter superfamily CJO35_11235 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 CJO35_11235 IPR004710 Bile acid:sodium symporter CJO35_11240 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_11240 IPR036625 E3-binding domain superfamily CJO35_11240 IPR004167 Peripheral subunit-binding domain CJO35_11240 IPR011053 Single hybrid motif CJO35_11240 IPR006255 Dihydrolipoamide succinyltransferase CJO35_11240 IPR000089 Biotin/lipoyl attachment CJO35_11240 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CJO35_11240 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CJO35_11245 IPR029061 Thiamin diphosphate-binding fold CJO35_11245 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CJO35_11245 IPR001017 Dehydrogenase, E1 component CJO35_11245 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial CJO35_11245 IPR011603 2-oxoglutarate dehydrogenase E1 component CJO35_11245 IPR005475 Transketolase-like, pyrimidine-binding domain CJO35_11245 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CJO35_11250 IPR002035 von Willebrand factor, type A CJO35_11250 IPR036465 von Willebrand factor A-like domain superfamily CJO35_11255 IPR001270 ClpA/B family CJO35_11255 IPR011704 ATPase, dynein-related, AAA domain CJO35_11255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_11255 IPR003593 AAA+ ATPase domain CJO35_11260 IPR001424 Superoxide dismutase, copper/zinc binding domain CJO35_11260 IPR032831 Prokaryotic lipoprotein-attachment site CJO35_11260 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CJO35_11260 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CJO35_11265 IPR038765 Papain-like cysteine peptidase superfamily CJO35_11265 IPR036779 LysM domain superfamily CJO35_11265 IPR018392 LysM domain CJO35_11265 IPR000064 Endopeptidase, NLPC/P60 domain CJO35_11275 IPR002528 Multi antimicrobial extrusion protein CJO35_11280 IPR024078 Putative deacetylase LmbE-like domain superfamily CJO35_11280 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CJO35_11280 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 CJO35_11285 IPR036492 Hypothetical protein YojF superfamily CJO35_11285 IPR014934 Protein of unknown function DUF1806 CJO35_11295 IPR004626 RarD protein CJO35_11295 IPR000620 EamA domain CJO35_11300 IPR008978 HSP20-like chaperone CJO35_11305 IPR036908 RlpA-like domain superfamily CJO35_11305 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJO35_11305 IPR036749 Expansin, cellulose-binding-like domain superfamily CJO35_11320 IPR002577 Helix-turn-helix, HxlR type CJO35_11320 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_11320 IPR036390 Winged helix DNA-binding domain superfamily CJO35_11320 IPR011991 ArsR-like helix-turn-helix domain CJO35_11325 IPR000415 Nitroreductase-like CJO35_11325 IPR029479 Nitroreductase CJO35_11330 IPR029058 Alpha/Beta hydrolase fold CJO35_11330 IPR002925 Dienelactone hydrolase CJO35_11335 IPR021741 Protein of unknown function DUF3311 CJO35_11340 IPR038377 Sodium/glucose symporter superfamily CJO35_11340 IPR001734 Sodium/solute symporter CJO35_11345 IPR029045 ClpP/crotonase-like domain superfamily CJO35_11345 IPR002477 Peptidoglycan binding-like CJO35_11345 IPR041489 PDZ domain 6 CJO35_11345 IPR004447 C-terminal-processing peptidase S41A CJO35_11345 IPR036366 PGBD superfamily CJO35_11345 IPR036365 PGBD-like superfamily CJO35_11345 IPR005151 Tail specific protease CJO35_11345 IPR001478 PDZ domain CJO35_11345 IPR036034 PDZ superfamily CJO35_11350 IPR013216 Methyltransferase type 11 CJO35_11350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_11360 IPR003709 Peptidase M15B CJO35_11360 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CJO35_11365 IPR000845 Nucleoside phosphorylase domain CJO35_11365 IPR035994 Nucleoside phosphorylase superfamily CJO35_11365 IPR018016 Nucleoside phosphorylase, conserved site CJO35_11365 IPR004402 Purine nucleoside phosphorylase DeoD-type CJO35_11370 IPR005524 Predicted permease DUF318 CJO35_11385 IPR025923 YodL-like CJO35_11390 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CJO35_11390 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJO35_11395 IPR025545 YozD-like protein CJO35_11410 IPR023089 YozE SAM-like domain CJO35_11410 IPR036806 YozE SAM-like superfamily CJO35_11410 IPR010673 Protein of unknown function UPF0346 CJO35_11415 IPR022451 Conserved hypothetical protein CHP03829, YokU CJO35_11415 IPR022453 Zinc finger, MqsA-type CJO35_11420 IPR013785 Aldolase-type TIM barrel CJO35_11420 IPR022459 Lysine-2,3-aminomutase CJO35_11420 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CJO35_11420 IPR025895 Lysine-2,3-aminomutase, C-terminal domain CJO35_11425 IPR016181 Acyl-CoA N-acyltransferase CJO35_11425 IPR022525 Beta-lysine N-acetyltransferase CJO35_11425 IPR000182 GNAT domain CJO35_11430 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_11430 IPR011650 Peptidase M20, dimerisation domain CJO35_11430 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase CJO35_11430 IPR002933 Peptidase M20 CJO35_11435 IPR037171 NagB/RpiA transferase-like CJO35_11435 IPR004165 Coenzyme A transferase family I CJO35_11435 IPR012791 3-oxoacid CoA-transferase, subunit B CJO35_11440 IPR037171 NagB/RpiA transferase-like CJO35_11440 IPR004163 Coenzyme A transferase binding site CJO35_11440 IPR004165 Coenzyme A transferase family I CJO35_11440 IPR012792 3-oxoacid CoA-transferase, subunit A CJO35_11445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_11445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_11445 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_11445 IPR005814 Aminotransferase class-III CJO35_11460 IPR016181 Acyl-CoA N-acyltransferase CJO35_11460 IPR000182 GNAT domain CJO35_11465 IPR028427 Peptide methionine sulfoxide reductase CJO35_11465 IPR002579 Peptide methionine sulphoxide reductase MrsB CJO35_11465 IPR011057 Mss4-like superfamily CJO35_11470 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CJO35_11470 IPR002569 Peptide methionine sulphoxide reductase MsrA CJO35_11475 IPR036390 Winged helix DNA-binding domain superfamily CJO35_11475 IPR000835 MarR-type HTH domain CJO35_11475 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_11485 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CJO35_11485 IPR029787 Nucleotide cyclase CJO35_11485 IPR000160 GGDEF domain CJO35_11490 IPR002528 Multi antimicrobial extrusion protein CJO35_11500 IPR035403 Uncharacterized protein YmpT-like CJO35_11505 IPR018672 Protein of unknown function DUF2140 CJO35_11510 IPR013830 SGNH hydrolase-type esterase domain CJO35_11510 IPR036514 SGNH hydrolase superfamily CJO35_11515 IPR013766 Thioredoxin domain CJO35_11515 IPR036249 Thioredoxin-like superfamily CJO35_11515 IPR003782 Copper chaperone SCO1/SenC CJO35_11520 IPR003797 DegV CJO35_11525 IPR019687 Protein of unknown function DUF2535 CJO35_11530 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJO35_11530 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CJO35_11530 IPR001721 Threonine dehydratase, ACT-like domain CJO35_11530 IPR011820 L-threonine dehydratase biosynthetic IlvA CJO35_11530 IPR001926 Pyridoxal-phosphate dependent enzyme CJO35_11535 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_11535 IPR002078 RNA polymerase sigma factor 54 interaction domain CJO35_11535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_11535 IPR003593 AAA+ ATPase domain CJO35_11535 IPR013668 Ribonuclease R winged-helix domain CJO35_11540 IPR005744 Hly-III CJO35_11540 IPR004254 AdipoR/Haemolysin-III-related CJO35_11550 IPR012259 Dihydrofolate reductase CJO35_11550 IPR024072 Dihydrofolate reductase-like domain superfamily CJO35_11550 IPR017925 Dihydrofolate reductase conserved site CJO35_11550 IPR001796 Dihydrofolate reductase domain CJO35_11555 IPR036681 PgpA-like superfamily CJO35_11555 IPR026038 Putative phosphatidylglycerophosphatase CJO35_11555 IPR007686 YutG/PgpA domain CJO35_11560 IPR025616 YpjP-like protein CJO35_11565 IPR007536 Ribosomal RNA small subunit methyltransferase J CJO35_11565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_11570 IPR009474 Putative bacilliredoxin, YphP/YqiW family CJO35_11570 IPR036249 Thioredoxin-like superfamily CJO35_11575 IPR037237 IlvD/EDD, N-terminal domain CJO35_11575 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CJO35_11575 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CJO35_11575 IPR004404 Dihydroxy-acid dehydratase CJO35_11575 IPR042096 Dihydroxy-acid dehydratase, C-terminal CJO35_11580 IPR014824 Scaffold protein Nfu/NifU, N-terminal CJO35_11580 IPR004155 PBS lyase HEAT-like repeat CJO35_11580 IPR025989 Virulence factor domain CJO35_11580 IPR016024 Armadillo-type fold CJO35_11580 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily CJO35_11580 IPR011989 Armadillo-like helical CJO35_11585 IPR006674 HD domain CJO35_11585 IPR003607 HD/PDEase domain CJO35_11590 IPR036249 Thioredoxin-like superfamily CJO35_11590 IPR029760 Glutathione peroxidase conserved site CJO35_11590 IPR029759 Glutathione peroxidase active site CJO35_11590 IPR000889 Glutathione peroxidase CJO35_11595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_11595 IPR000559 Formate-tetrahydrofolate ligase, FTHFS CJO35_11595 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site CJO35_11600 IPR029062 Class I glutamine amidotransferase-like CJO35_11600 IPR005697 Homoserine O-succinyltransferase MetA CJO35_11600 IPR033752 MetA family CJO35_11605 IPR001296 Glycosyl transferase, family 1 CJO35_11605 IPR009695 Diacylglycerol glucosyltransferase, N-terminal CJO35_11605 IPR023589 Processive diacylglycerol beta-glucosyltransferase CJO35_11615 IPR012156 Cold shock, CspA CJO35_11615 IPR012340 Nucleic acid-binding, OB-fold CJO35_11615 IPR011129 Cold shock domain CJO35_11615 IPR019844 Cold-shock (CSD) domain CJO35_11615 IPR002059 Cold-shock protein, DNA-binding CJO35_11625 IPR020314 Uncharacterised protein family YpzA CJO35_11630 IPR019718 Protein of unknown function DUF2602 CJO35_11635 IPR036397 Ribonuclease H superfamily CJO35_11635 IPR002156 Ribonuclease H domain CJO35_11635 IPR012337 Ribonuclease H-like superfamily CJO35_11640 IPR003744 Queuosine precursor transporter CJO35_11645 IPR012337 Ribonuclease H-like superfamily CJO35_11645 IPR036397 Ribonuclease H superfamily CJO35_11645 IPR002156 Ribonuclease H domain CJO35_11650 IPR017526 Small acid-soluble spore protein, SspL CJO35_11655 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CJO35_11655 IPR002421 5'-3' exonuclease, N-terminal CJO35_11655 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CJO35_11655 IPR020045 DNA polymerase I-like, H3TH domain CJO35_11655 IPR038969 Flap endonuclease CJO35_11655 IPR008918 Helix-hairpin-helix motif, class 2 CJO35_11655 IPR029060 PIN-like domain superfamily CJO35_11665 IPR019688 Protein of unknown function DUF2533 CJO35_11670 IPR022812 Dynamin superfamily CJO35_11670 IPR027094 Mitofusin family CJO35_11670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_11680 IPR007269 Isoprenylcysteine carboxyl methyltransferase CJO35_11685 IPR011141 Polyketide synthase, type III CJO35_11685 IPR016039 Thiolase-like CJO35_11685 IPR012328 Chalcone/stilbene synthase, C-terminal CJO35_11685 IPR001099 Chalcone/stilbene synthase, N-terminal CJO35_11685 IPR018088 Chalcone/stilbene synthase, active site CJO35_11690 IPR017813 Mycothiol acetyltransferase CJO35_11690 IPR000182 GNAT domain CJO35_11690 IPR016181 Acyl-CoA N-acyltransferase CJO35_11695 IPR006043 Xanthine/uracil/vitamin C permease CJO35_11695 IPR006042 Xanthine/uracil permease CJO35_11695 IPR017588 Uric acid permease UacT-like CJO35_11700 IPR010079 Xanthine phosphoribosyltransferase CJO35_11700 IPR029057 Phosphoribosyltransferase-like CJO35_11700 IPR000836 Phosphoribosyltransferase domain CJO35_11705 IPR001333 Peptidase M32, carboxypeptidase Taq CJO35_11710 IPR006555 ATP-dependent helicase, C-terminal CJO35_11710 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CJO35_11710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_11725 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CJO35_11725 IPR000241 Putative RNA methylase domain CJO35_11725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_11725 IPR004114 THUMP domain CJO35_11735 IPR019933 DivIVA domain CJO35_11735 IPR011229 Cell cycle protein GpsB CJO35_11735 IPR007793 DivIVA family CJO35_11740 IPR010697 YspA SLOG family CJO35_11745 IPR020108 Spore coat protein CotD CJO35_11750 IPR038720 YprB, ribonuclease H-like domain CJO35_11750 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_11750 IPR012337 Ribonuclease H-like superfamily CJO35_11755 IPR001650 Helicase, C-terminal CJO35_11755 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_11755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_11755 IPR011545 DEAD/DEAH box helicase domain CJO35_11755 IPR018973 DEAD/DEAH-box helicase, putative CJO35_11760 IPR011055 Duplicated hybrid motif CJO35_11760 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CJO35_11765 IPR002068 Alpha crystallin/Hsp20 domain CJO35_11765 IPR008978 HSP20-like chaperone CJO35_11770 IPR025555 YppG-like protein CJO35_11775 IPR025553 YppF-like protein CJO35_11780 IPR014913 Protein of unknown function DUF1798 CJO35_11780 IPR023351 YppE-like superfamily CJO35_11795 IPR019658 Protein of unknown function DUF2515 CJO35_11800 IPR011856 tRNA endonuclease-like domain superfamily CJO35_11800 IPR011335 Restriction endonuclease type II-like CJO35_11800 IPR004612 Holliday junction resolvase RecU CJO35_11805 IPR012338 Beta-lactamase/transpeptidase-like CJO35_11805 IPR013783 Immunoglobulin-like fold CJO35_11805 IPR023346 Lysozyme-like domain superfamily CJO35_11805 IPR036950 Penicillin binding protein transglycosylase domain CJO35_11805 IPR001460 Penicillin-binding protein, transpeptidase CJO35_11805 IPR036116 Fibronectin type III superfamily CJO35_11805 IPR003961 Fibronectin type III CJO35_11805 IPR001264 Glycosyl transferase, family 51 CJO35_11815 IPR003265 HhH-GPD domain CJO35_11815 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CJO35_11815 IPR004036 Endonuclease III-like, conserved site-2 CJO35_11815 IPR000445 Helix-hairpin-helix motif CJO35_11815 IPR011257 DNA glycosylase CJO35_11815 IPR004035 Endonuclease III, iron-sulphur binding site CJO35_11815 IPR005759 Endonuclease III CJO35_11815 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CJO35_11820 IPR034829 DnaD-like domain superfamily CJO35_11820 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_11820 IPR006343 DnaD domain CJO35_11825 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CJO35_11825 IPR004522 Asparagine-tRNA ligase CJO35_11825 IPR012340 Nucleic acid-binding, OB-fold CJO35_11825 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_11825 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CJO35_11825 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CJO35_11830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_11830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_11830 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_11830 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CJO35_11830 IPR004839 Aminotransferase, class I/classII CJO35_11835 IPR041401 Domain of unknown function DUF5590 CJO35_11835 IPR025711 PepSY domain CJO35_11840 IPR012190 Uncharacterised conserved protein UCP036698, YpmA CJO35_11845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_11845 IPR001650 Helicase, C-terminal CJO35_11845 IPR012337 Ribonuclease H-like superfamily CJO35_11845 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_11845 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CJO35_11845 IPR036397 Ribonuclease H superfamily CJO35_11845 IPR006555 ATP-dependent helicase, C-terminal CJO35_11845 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CJO35_11845 IPR006310 3'-5' exonuclease DinG CJO35_11845 IPR013520 Exonuclease, RNase T/DNA polymerase III CJO35_11845 IPR006935 Helicase/UvrB, N-terminal CJO35_11850 IPR003190 Aspartate decarboxylase CJO35_11850 IPR009010 Aspartate decarboxylase-like domain superfamily CJO35_11855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_11855 IPR003721 Pantoate-beta-alanine ligase CJO35_11855 IPR004821 Cytidyltransferase-like domain CJO35_11855 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CJO35_11860 IPR003700 Ketopantoate hydroxymethyltransferase CJO35_11860 IPR040442 Pyruvate kinase-like domain superfamily CJO35_11860 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CJO35_11870 IPR030855 Bifunctional ligase/repressor BirA CJO35_11870 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CJO35_11870 IPR004409 Biotin operon repressor, helix-turn-helix domain CJO35_11870 IPR003142 Biotin protein ligase, C-terminal CJO35_11870 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CJO35_11870 IPR013196 Helix-turn-helix, type 11 CJO35_11870 IPR008988 Transcriptional repressor, C-terminal CJO35_11870 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_11870 IPR036390 Winged helix DNA-binding domain superfamily CJO35_11875 IPR023068 CCA-adding enzyme, firmicutes CJO35_11875 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CJO35_11875 IPR032810 CCA-adding enzyme, C-terminal CJO35_11875 IPR002646 Poly A polymerase, head domain CJO35_11880 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA CJO35_11880 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJO35_11880 IPR001296 Glycosyl transferase, family 1 CJO35_11885 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CJO35_11885 IPR024078 Putative deacetylase LmbE-like domain superfamily CJO35_11885 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 CJO35_11890 IPR004363 Methylglyoxal synthase CJO35_11890 IPR018148 Methylglyoxal synthase, active site CJO35_11890 IPR036914 Methylglyoxal synthase-like domain superfamily CJO35_11890 IPR011607 Methylglyoxal synthase-like domain CJO35_11895 IPR023940 Dihydrodipicolinate reductase CJO35_11895 IPR036291 NAD(P)-binding domain superfamily CJO35_11895 IPR022663 Dihydrodipicolinate reductase, C-terminal CJO35_11895 IPR000846 Dihydrodipicolinate reductase, N-terminal CJO35_11895 IPR022664 Dihydrodipicolinate reductase, conserved site CJO35_11900 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CJO35_11900 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD CJO35_11905 IPR019264 Domain of unknown function DUF2179 CJO35_11905 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_11905 IPR003740 Uncharacterised membrane protein YitT CJO35_11910 IPR014231 Sporulation protein YpjB CJO35_11915 IPR009845 Protein of unknown function DUF1405 CJO35_11920 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit CJO35_11920 IPR036150 Cytochrome b/b6, C-terminal domain superfamily CJO35_11920 IPR005798 Cytochrome b/b6, C-terminal CJO35_11920 IPR009056 Cytochrome c-like domain CJO35_11920 IPR036909 Cytochrome c-like domain superfamily CJO35_11920 IPR027387 Cytochrome b/b6-like domain superfamily CJO35_11925 IPR027387 Cytochrome b/b6-like domain superfamily CJO35_11925 IPR016174 Di-haem cytochrome, transmembrane CJO35_11925 IPR005797 Cytochrome b/b6, N-terminal CJO35_11930 IPR014349 Rieske iron-sulphur protein CJO35_11930 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CJO35_11930 IPR006311 Twin-arginine translocation pathway, signal sequence CJO35_11930 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CJO35_11935 IPR019615 Protein of unknown function DUF2487 CJO35_11940 IPR014957 IDEAL domain CJO35_11940 IPR027393 Virus scaffolding protein, C-terminal CJO35_11940 IPR011188 Uncharacterised protein family UPF0302 CJO35_11940 IPR014963 Uncharacterised domain UPF0302, N-terminal CJO35_11940 IPR038091 UPF0302, N-terminal domain superfamily CJO35_11945 IPR019734 Tetratricopeptide repeat CJO35_11945 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_11945 IPR013026 Tetratricopeptide repeat-containing domain CJO35_11950 IPR036968 Enolpyruvate transferase domain superfamily CJO35_11950 IPR001986 Enolpyruvate transferase domain CJO35_11950 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CJO35_11950 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CJO35_11950 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CJO35_11955 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_11955 IPR036291 NAD(P)-binding domain superfamily CJO35_11955 IPR002912 ACT domain CJO35_11955 IPR003099 Prephenate dehydrogenase CJO35_11960 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CJO35_11960 IPR005861 Histidinol-phosphate aminotransferase family CJO35_11960 IPR004839 Aminotransferase, class I/classII CJO35_11960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_11960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_11960 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_11965 IPR011060 Ribulose-phosphate binding barrel CJO35_11965 IPR018204 Tryptophan synthase, alpha chain, active site CJO35_11965 IPR002028 Tryptophan synthase, alpha chain CJO35_11965 IPR013785 Aldolase-type TIM barrel CJO35_11970 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJO35_11970 IPR006653 Tryptophan synthase, beta chain, conserved site CJO35_11970 IPR006654 Tryptophan synthase, beta chain CJO35_11970 IPR023026 Tryptophan synthase beta chain/beta chain-like CJO35_11970 IPR001926 Pyridoxal-phosphate dependent enzyme CJO35_11975 IPR011060 Ribulose-phosphate binding barrel CJO35_11975 IPR013785 Aldolase-type TIM barrel CJO35_11975 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CJO35_11980 IPR013785 Aldolase-type TIM barrel CJO35_11980 IPR013798 Indole-3-glycerol phosphate synthase CJO35_11980 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CJO35_11980 IPR011060 Ribulose-phosphate binding barrel CJO35_11985 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CJO35_11985 IPR017459 Glycosyl transferase family 3, N-terminal domain CJO35_11985 IPR000312 Glycosyl transferase, family 3 CJO35_11985 IPR005940 Anthranilate phosphoribosyl transferase CJO35_11985 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CJO35_11990 IPR005256 Anthranilate synthase component I, PabB-like CJO35_11990 IPR015890 Chorismate-utilising enzyme, C-terminal CJO35_11990 IPR006805 Anthranilate synthase component I, N-terminal CJO35_11990 IPR005801 ADC synthase CJO35_11990 IPR019999 Anthranilate synthase component I-like CJO35_11995 IPR035959 RutC-like superfamily CJO35_11995 IPR008243 Chorismate mutase, AroH class CJO35_12000 IPR030960 3-dehydroquinate synthase domain CJO35_12000 IPR016037 3-dehydroquinate synthase AroB CJO35_12000 IPR030963 3-dehydroquinate synthase family CJO35_12005 IPR020541 Chorismate synthase, conserved site CJO35_12005 IPR000453 Chorismate synthase CJO35_12005 IPR035904 Chorismate synthase AroC superfamily CJO35_12010 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CJO35_12010 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJO35_12010 IPR000780 MCP methyltransferase, CheR-type CJO35_12010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_12015 IPR034907 Nucleoside diphosphate kinase-like domain CJO35_12015 IPR023005 Nucleoside diphosphate kinase, active site CJO35_12015 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CJO35_12015 IPR001564 Nucleoside diphosphate kinase CJO35_12020 IPR000092 Polyprenyl synthetase CJO35_12020 IPR014119 Heptaprenyl diphosphate synthase component II CJO35_12020 IPR033749 Polyprenyl synthetase, conserved site CJO35_12020 IPR008949 Isoprenoid synthase domain superfamily CJO35_12025 IPR023576 UbiE/COQ5 methyltransferase, conserved site CJO35_12025 IPR004033 UbiE/COQ5 methyltransferase CJO35_12025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_12025 IPR014122 Demethylmenaquinone methyltransferase CJO35_12030 IPR009920 Heptaprenyl diphosphate synthase subunit 1 CJO35_12035 IPR000824 Transcription attenuation protein MtrB CJO35_12035 IPR023558 Tryptophan RNA-binding attenuator protein domain CJO35_12035 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily CJO35_12040 IPR020602 GTP cyclohydrolase I domain CJO35_12040 IPR018234 GTP cyclohydrolase I, conserved site CJO35_12040 IPR001474 GTP cyclohydrolase I CJO35_12045 IPR020816 Histone-like DNA-binding protein, conserved site CJO35_12045 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CJO35_12045 IPR000119 Histone-like DNA-binding protein CJO35_12050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12050 IPR014201 Sporulation stage IV, protein A CJO35_12060 IPR020076 Protein of unknown function DUF2768 CJO35_12070 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CJO35_12070 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_12070 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CJO35_12070 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_12070 IPR036291 NAD(P)-binding domain superfamily CJO35_12070 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CJO35_12075 IPR006073 GTP binding domain CJO35_12075 IPR032859 GTPase Der, C-terminal KH-domain-like CJO35_12075 IPR015946 K homology domain-like, alpha/beta CJO35_12075 IPR005225 Small GTP-binding protein domain CJO35_12075 IPR031166 EngA-type guanine nucleotide-binding (G) domain CJO35_12075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12075 IPR016484 GTP-binding protein EngA CJO35_12085 IPR025918 YIEGIA protein CJO35_12090 IPR014617 Predicted membrane protein, Bacillus YphA type CJO35_12095 IPR025414 YpzI-like protein CJO35_12100 IPR013785 Aldolase-type TIM barrel CJO35_12100 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent CJO35_12100 IPR000262 FMN-dependent dehydrogenase CJO35_12105 IPR003029 S1 domain CJO35_12105 IPR022967 RNA-binding domain, S1 CJO35_12105 IPR012340 Nucleic acid-binding, OB-fold CJO35_12110 IPR003136 Cytidylate kinase CJO35_12110 IPR011994 Cytidylate kinase domain CJO35_12110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12115 IPR035281 Protein of unknown function DUF5359 CJO35_12120 IPR014239 Spore germination YpeB CJO35_12120 IPR025711 PepSY domain CJO35_12125 IPR002477 Peptidoglycan binding-like CJO35_12125 IPR014224 Spore cortex-lytic enzyme SleB CJO35_12125 IPR011105 Cell wall hydrolase, SleB CJO35_12125 IPR036365 PGBD-like superfamily CJO35_12125 IPR042047 Cell wall hydrolase SleB, domain 1 CJO35_12125 IPR036366 PGBD superfamily CJO35_12130 IPR023596 Peptidase PrsW, archaeal/bacterial CJO35_12130 IPR026898 Intramembrane metalloprotease PrsW CJO35_12135 IPR006034 Asparaginase/glutaminase-like CJO35_12135 IPR020827 Asparaginase/glutaminase, active site 1 CJO35_12135 IPR027473 L-asparaginase, C-terminal CJO35_12135 IPR027475 Asparaginase/glutaminase, active site 2 CJO35_12135 IPR040919 Asparaginase/glutaminase, C-terminal CJO35_12135 IPR004550 L-asparaginase, type II CJO35_12135 IPR037152 L-asparaginase, N-terminal domain superfamily CJO35_12135 IPR027474 L-asparaginase, N-terminal CJO35_12135 IPR036152 Asparaginase/glutaminase-like superfamily CJO35_12140 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_12140 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA CJO35_12145 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CJO35_12145 IPR036291 NAD(P)-binding domain superfamily CJO35_12145 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CJO35_12145 IPR033524 Leu/Phe/Val dehydrogenases active site CJO35_12145 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CJO35_12145 IPR014362 Glutamate dehydrogenase CJO35_12145 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CJO35_12150 IPR008681 Negative regulator of genetic competence, MecA CJO35_12150 IPR038471 MecA, C-terminal domain superfamily CJO35_12155 IPR029052 Metallo-dependent phosphatase-like CJO35_12155 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_12160 IPR020210 Uncharacterised protein family, YpbF, transmembrane CJO35_12165 IPR036779 LysM domain superfamily CJO35_12165 IPR018392 LysM domain CJO35_12170 IPR003675 CAAX prenyl protease 2 CJO35_12175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12175 IPR001650 Helicase, C-terminal CJO35_12175 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_12175 IPR004589 DNA helicase, ATP-dependent, RecQ type CJO35_12175 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CJO35_12175 IPR011545 DEAD/DEAH box helicase domain CJO35_12180 IPR008308 Uncharacterised conserved protein UCP021350 CJO35_12180 IPR029491 Helicase Helix-turn-helix domain CJO35_12180 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12185 IPR001080 3Fe-4S ferredoxin CJO35_12185 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_12190 IPR024529 ECF transporter, substrate-specific component CJO35_12190 IPR025720 ECF transporter, Riboflavin transporter RibU CJO35_12195 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CJO35_12195 IPR036291 NAD(P)-binding domain superfamily CJO35_12195 IPR006236 D-3-phosphoglycerate dehydrogenase CJO35_12195 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJO35_12195 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CJO35_12195 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO35_12195 IPR002912 ACT domain CJO35_12195 IPR029009 Allosteric substrate binding domain superfamily CJO35_12200 IPR016047 Peptidase M23 CJO35_12200 IPR011055 Duplicated hybrid motif CJO35_12200 IPR007340 Opacity-associated protein A CJO35_12210 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12210 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_12210 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_12210 IPR007627 RNA polymerase sigma-70 region 2 CJO35_12210 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CJO35_12210 IPR013325 RNA polymerase sigma factor, region 2 CJO35_12210 IPR014284 RNA polymerase sigma-70 like domain CJO35_12210 IPR039425 RNA polymerase sigma-70 like CJO35_12215 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU CJO35_12215 IPR004474 Cell envelope-related transcriptional attenuator domain CJO35_12230 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_12230 IPR005467 Histidine kinase domain CJO35_12230 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_12230 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_12230 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_12235 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12235 IPR011006 CheY-like superfamily CJO35_12235 IPR039420 Transcriptional regulatory protein WalR-like CJO35_12235 IPR001789 Signal transduction response regulator, receiver domain CJO35_12235 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_12235 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_12240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_12240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_12240 IPR041328 ResE, histidine kinase sensor domain CJO35_12240 IPR000014 PAS domain CJO35_12240 IPR035965 PAS domain superfamily CJO35_12240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_12240 IPR013767 PAS fold CJO35_12240 IPR003660 HAMP domain CJO35_12240 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_12240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_12240 IPR005467 Histidine kinase domain CJO35_12245 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_12245 IPR001789 Signal transduction response regulator, receiver domain CJO35_12245 IPR039420 Transcriptional regulatory protein WalR-like CJO35_12245 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12245 IPR011006 CheY-like superfamily CJO35_12250 IPR002541 Cytochrome c assembly protein CJO35_12250 IPR017562 Cytochrome c-type biogenesis protein CcsA CJO35_12255 IPR007816 ResB-like domain CJO35_12260 IPR023555 Thiol-disulphide oxidoreductase ResA CJO35_12260 IPR036249 Thioredoxin-like superfamily CJO35_12260 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CJO35_12260 IPR017937 Thioredoxin, conserved site CJO35_12260 IPR013766 Thioredoxin domain CJO35_12265 IPR036986 RNA-binding S4 domain superfamily CJO35_12265 IPR002942 RNA-binding S4 domain CJO35_12265 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CJO35_12265 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CJO35_12265 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CJO35_12265 IPR006145 Pseudouridine synthase, RsuA/RluA CJO35_12265 IPR020103 Pseudouridine synthase, catalytic domain superfamily CJO35_12270 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CJO35_12275 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CJO35_12280 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CJO35_12280 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CJO35_12280 IPR012338 Beta-lactamase/transpeptidase-like CJO35_12280 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CJO35_12285 IPR025013 Protein of unknown function DUF3907 CJO35_12290 IPR005234 Chromosome segregation/condensation protein ScpB CJO35_12290 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12290 IPR036390 Winged helix DNA-binding domain superfamily CJO35_12295 IPR003768 Segregation and condensation protein A CJO35_12305 IPR023203 TTHA0068-like superfamily CJO35_12305 IPR005500 Protein of unknown function DUF309 CJO35_12310 IPR016181 Acyl-CoA N-acyltransferase CJO35_12310 IPR000182 GNAT domain CJO35_12315 IPR002180 Lumazine/riboflavin synthase CJO35_12315 IPR036467 Lumazine/riboflavin synthase superfamily CJO35_12315 IPR034964 Lumazine synthase CJO35_12320 IPR036144 RibA-like superfamily CJO35_12320 IPR032677 GTP cyclohydrolase II CJO35_12320 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CJO35_12320 IPR016299 Riboflavin biosynthesis protein RibBA CJO35_12320 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CJO35_12320 IPR000926 GTP cyclohydrolase II, RibA CJO35_12325 IPR026017 Lumazine-binding domain CJO35_12325 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CJO35_12325 IPR017938 Riboflavin synthase-like beta-barrel CJO35_12325 IPR001783 Lumazine-binding protein CJO35_12330 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CJO35_12330 IPR011549 Riboflavin-specific deaminase, C-terminal CJO35_12330 IPR016192 APOBEC/CMP deaminase, zinc-binding CJO35_12330 IPR024072 Dihydrofolate reductase-like domain superfamily CJO35_12330 IPR016193 Cytidine deaminase-like CJO35_12330 IPR002125 Cytidine and deoxycytidylate deaminase domain CJO35_12330 IPR004794 Riboflavin biosynthesis protein RibD CJO35_12340 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_12340 IPR029052 Metallo-dependent phosphatase-like CJO35_12345 IPR002068 Alpha crystallin/Hsp20 domain CJO35_12345 IPR008978 HSP20-like chaperone CJO35_12355 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_12355 IPR019734 Tetratricopeptide repeat CJO35_12355 IPR013026 Tetratricopeptide repeat-containing domain CJO35_12355 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_12360 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CJO35_12360 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CJO35_12360 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CJO35_12360 IPR029000 Cyclophilin-like domain superfamily CJO35_12365 IPR009343 Protein of unknown function DUF1002 CJO35_12370 IPR008585 Poly-gamma-glutamate hydrolase CJO35_12370 IPR038128 Poly-gamma-glutamate hydrolase superfamily CJO35_12375 IPR002986 Diaminopimelate decarboxylase, LysA CJO35_12375 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CJO35_12375 IPR029066 PLP-binding barrel CJO35_12375 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CJO35_12375 IPR000183 Ornithine/DAP/Arg decarboxylase CJO35_12375 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CJO35_12375 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CJO35_12375 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CJO35_12385 IPR004995 Bacillus/Clostridium Ger spore germination protein CJO35_12390 IPR025914 Stage V sporulation protein AE CJO35_12395 IPR005562 SpoVA CJO35_12395 IPR014204 Sporulation stage V, protein AE CJO35_12400 IPR016039 Thiolase-like CJO35_12400 IPR010894 Stage V sporulation AD CJO35_12400 IPR038369 Stage V sporulation AD superfamily CJO35_12405 IPR014203 Sporulation stage V, protein AC CJO35_12405 IPR005562 SpoVA CJO35_12410 IPR020144 Stage V sporulation protein AB CJO35_12415 IPR021997 Stage V sporulation protein AA CJO35_12415 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily CJO35_12420 IPR014236 RNA polymerase sigma-F type CJO35_12420 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_12420 IPR014284 RNA polymerase sigma-70 like domain CJO35_12420 IPR014322 RNA polymerase sigma-B/F/G type CJO35_12420 IPR013325 RNA polymerase sigma factor, region 2 CJO35_12420 IPR007627 RNA polymerase sigma-70 region 2 CJO35_12420 IPR000943 RNA polymerase sigma-70 CJO35_12420 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12420 IPR007624 RNA polymerase sigma-70 region 3 CJO35_12420 IPR007630 RNA polymerase sigma-70 region 4 CJO35_12425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_12425 IPR010194 Anti-sigma F factor CJO35_12425 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_12430 IPR036513 STAS domain superfamily CJO35_12430 IPR002645 STAS domain CJO35_12430 IPR014237 Anti-sigma F factor antagonist CJO35_12430 IPR003658 Anti-sigma factor antagonist CJO35_12435 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CJO35_12435 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CJO35_12435 IPR012338 Beta-lactamase/transpeptidase-like CJO35_12435 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CJO35_12435 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CJO35_12435 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CJO35_12440 IPR011268 Purine nucleoside phosphorylase CJO35_12440 IPR018099 Purine phosphorylase, family 2, conserved site CJO35_12440 IPR035994 Nucleoside phosphorylase superfamily CJO35_12440 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific CJO35_12440 IPR000845 Nucleoside phosphorylase domain CJO35_12445 IPR010045 Phosphopentomutase CJO35_12445 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_12445 IPR006124 Metalloenzyme CJO35_12445 IPR024052 Phosphopentomutase DeoB cap domain superfamily CJO35_12450 IPR011932 Tyrosine recombinase XerD CJO35_12450 IPR002104 Integrase, catalytic domain CJO35_12450 IPR011010 DNA breaking-rejoining enzyme, catalytic core CJO35_12450 IPR013762 Integrase-like, catalytic domain superfamily CJO35_12450 IPR010998 Integrase/recombinase, N-terminal CJO35_12450 IPR023009 Tyrosine recombinase XerC/XerD CJO35_12450 IPR004107 Integrase, SAM-like, N-terminal CJO35_12455 IPR025321 Protein of unknown function DUF4227 CJO35_12460 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12460 IPR036390 Winged helix DNA-binding domain superfamily CJO35_12460 IPR002481 Ferric-uptake regulator CJO35_12465 IPR002798 Stage II sporulation protein M-like CJO35_12465 IPR014196 Stage II sporulation protein M CJO35_12470 IPR004501 Phosphotransferase system, EIIC component, type 3 CJO35_12470 IPR003352 Phosphotransferase system, EIIC CJO35_12475 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_12475 IPR013012 Phosphotransferase system, EIIB component, type 3 CJO35_12475 IPR036095 PTS system IIB component-like superfamily CJO35_12490 IPR016181 Acyl-CoA N-acyltransferase CJO35_12490 IPR000182 GNAT domain CJO35_12495 IPR016195 Polymerase/histidinol phosphatase-like CJO35_12495 IPR005287 Conserved hypothetical protein CHP00375 CJO35_12495 IPR010994 RuvA domain 2-like CJO35_12500 IPR020084 NUDIX hydrolase, conserved site CJO35_12500 IPR020476 NUDIX hydrolase CJO35_12500 IPR000086 NUDIX hydrolase domain CJO35_12500 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_12505 IPR025177 Cell division inhibitor MciZ CJO35_12510 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_12510 IPR009057 Homeobox-like domain superfamily CJO35_12510 IPR001647 DNA-binding HTH domain, TetR-type CJO35_12515 IPR032808 DoxX family CJO35_12520 IPR023210 NADP-dependent oxidoreductase domain CJO35_12520 IPR036812 NADP-dependent oxidoreductase domain superfamily CJO35_12520 IPR020471 Aldo/keto reductase CJO35_12530 IPR022742 Serine aminopeptidase, S33 CJO35_12530 IPR029058 Alpha/Beta hydrolase fold CJO35_12535 IPR020157 Uncharacterised protein family YqkC CJO35_12540 IPR035903 HesB-like domain superfamily CJO35_12540 IPR000361 FeS cluster biogenesis CJO35_12555 IPR007138 Antibiotic biosynthesis monooxygenase domain CJO35_12555 IPR011008 Dimeric alpha-beta barrel CJO35_12565 IPR002918 Lipase EstA/Esterase EstB CJO35_12565 IPR029058 Alpha/Beta hydrolase fold CJO35_12575 IPR000914 Solute-binding protein family 5 domain CJO35_12575 IPR030678 Peptide/nickel binding protein, MppA-type CJO35_12575 IPR039424 Solute-binding protein family 5 CJO35_12580 IPR035906 MetI-like superfamily CJO35_12580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_12585 IPR035906 MetI-like superfamily CJO35_12585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_12590 IPR003593 AAA+ ATPase domain CJO35_12590 IPR017871 ABC transporter, conserved site CJO35_12590 IPR003439 ABC transporter-like CJO35_12590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12595 IPR017871 ABC transporter, conserved site CJO35_12595 IPR003439 ABC transporter-like CJO35_12595 IPR003593 AAA+ ATPase domain CJO35_12595 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_12595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12600 IPR002528 Multi antimicrobial extrusion protein CJO35_12610 IPR014962 YolD-like protein CJO35_12615 IPR001126 UmuC domain CJO35_12615 IPR017961 DNA polymerase, Y-family, little finger domain CJO35_12615 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CJO35_12615 IPR024728 DNA polymerase type-Y, HhH motif CJO35_12620 IPR025546 YqzH-like protein CJO35_12625 IPR005829 Sugar transporter, conserved site CJO35_12625 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_12625 IPR020846 Major facilitator superfamily domain CJO35_12625 IPR011701 Major facilitator superfamily CJO35_12625 IPR036259 MFS transporter superfamily CJO35_12630 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_12630 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_12635 IPR004566 Pantothenate kinase CJO35_12635 IPR006083 Phosphoribulokinase/uridine kinase CJO35_12635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12650 IPR017871 ABC transporter, conserved site CJO35_12650 IPR003593 AAA+ ATPase domain CJO35_12650 IPR022501 Gallidermin ABC transporter, ATP-binding subunit CJO35_12650 IPR003439 ABC transporter-like CJO35_12650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12670 IPR008585 Poly-gamma-glutamate hydrolase CJO35_12670 IPR038128 Poly-gamma-glutamate hydrolase superfamily CJO35_12680 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_12680 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_12680 IPR036291 NAD(P)-binding domain superfamily CJO35_12685 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_12685 IPR001279 Metallo-beta-lactamase CJO35_12690 IPR036291 NAD(P)-binding domain superfamily CJO35_12690 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CJO35_12690 IPR000304 Pyrroline-5-carboxylate reductase CJO35_12690 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CJO35_12690 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_12695 IPR002933 Peptidase M20 CJO35_12695 IPR012166 Uncharacterised protein family RocB CJO35_12700 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CJO35_12700 IPR023663 NADPH dehydrogenase CJO35_12700 IPR013785 Aldolase-type TIM barrel CJO35_12705 IPR029058 Alpha/Beta hydrolase fold CJO35_12705 IPR022742 Serine aminopeptidase, S33 CJO35_12710 IPR038584 Ribosomal protein L33 superfamily CJO35_12710 IPR001705 Ribosomal protein L33 CJO35_12710 IPR018264 Ribosomal protein L33, conserved site CJO35_12710 IPR011332 Zinc-binding ribosomal protein CJO35_12715 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_12715 IPR013471 Ribonuclease Z/BN CJO35_12715 IPR001279 Metallo-beta-lactamase CJO35_12720 IPR019796 Glucose-6-phosphate dehydrogenase, active site CJO35_12720 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CJO35_12720 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CJO35_12720 IPR036291 NAD(P)-binding domain superfamily CJO35_12720 IPR001282 Glucose-6-phosphate dehydrogenase CJO35_12735 IPR011852 TRAP transporter solute receptor, TAXI family CJO35_12740 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CJO35_12740 IPR036390 Winged helix DNA-binding domain superfamily CJO35_12740 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12740 IPR011663 UbiC transcription regulator-associated CJO35_12740 IPR000524 Transcription regulator HTH, GntR CJO35_12745 IPR018120 Glycoside hydrolase family 1, active site CJO35_12745 IPR017853 Glycoside hydrolase superfamily CJO35_12745 IPR001360 Glycoside hydrolase family 1 CJO35_12750 IPR004501 Phosphotransferase system, EIIC component, type 3 CJO35_12750 IPR004796 Phosphotransferase system, cellobiose-type IIC component CJO35_12750 IPR003352 Phosphotransferase system, EIIC CJO35_12755 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CJO35_12755 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CJO35_12760 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_12760 IPR036095 PTS system IIB component-like superfamily CJO35_12760 IPR013012 Phosphotransferase system, EIIB component, type 3 CJO35_12765 IPR001952 Alkaline phosphatase CJO35_12765 IPR018299 Alkaline phosphatase, active site CJO35_12765 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_12770 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_12770 IPR036291 NAD(P)-binding domain superfamily CJO35_12770 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_12775 IPR006184 6-phosphogluconate-binding site CJO35_12775 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_12775 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CJO35_12775 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CJO35_12775 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CJO35_12775 IPR006183 6-phosphogluconate dehydrogenase CJO35_12775 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_12775 IPR036291 NAD(P)-binding domain superfamily CJO35_12780 IPR024728 DNA polymerase type-Y, HhH motif CJO35_12780 IPR001126 UmuC domain CJO35_12780 IPR017961 DNA polymerase, Y-family, little finger domain CJO35_12780 IPR022880 DNA polymerase IV CJO35_12780 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CJO35_12790 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes CJO35_12790 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CJO35_12790 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CJO35_12795 IPR002933 Peptidase M20 CJO35_12795 IPR010162 Peptidase M20B, peptidase T-like CJO35_12795 IPR008007 Peptidase M42 CJO35_12795 IPR011650 Peptidase M20, dimerisation domain CJO35_12795 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_12795 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CJO35_12800 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CJO35_12800 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CJO35_12800 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CJO35_12800 IPR029045 ClpP/crotonase-like domain superfamily CJO35_12800 IPR034733 Acetyl-CoA carboxylase CJO35_12805 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily CJO35_12805 IPR021062 Putative aromatic acid exporter, C-terminal CJO35_12805 IPR010343 Aromatic acid exporter family member 1 CJO35_12810 IPR003593 AAA+ ATPase domain CJO35_12810 IPR017871 ABC transporter, conserved site CJO35_12810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12810 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CJO35_12810 IPR003439 ABC transporter-like CJO35_12815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_12815 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CJO35_12815 IPR035906 MetI-like superfamily CJO35_12820 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJO35_12820 IPR018313 Solute-binding protein family 3, conserved site CJO35_12820 IPR001320 Ionotropic glutamate receptor CJO35_12825 IPR036249 Thioredoxin-like superfamily CJO35_12825 IPR009474 Putative bacilliredoxin, YphP/YqiW family CJO35_12830 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CJO35_12830 IPR005218 Diacylglycerol/lipid kinase CJO35_12830 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CJO35_12830 IPR001206 Diacylglycerol kinase, catalytic domain CJO35_12835 IPR011053 Single hybrid motif CJO35_12835 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_12835 IPR000089 Biotin/lipoyl attachment CJO35_12835 IPR036625 E3-binding domain superfamily CJO35_12835 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CJO35_12835 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CJO35_12835 IPR004167 Peripheral subunit-binding domain CJO35_12840 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CJO35_12840 IPR033248 Transketolase, C-terminal domain CJO35_12840 IPR029061 Thiamin diphosphate-binding fold CJO35_12840 IPR005475 Transketolase-like, pyrimidine-binding domain CJO35_12845 IPR029061 Thiamin diphosphate-binding fold CJO35_12845 IPR001017 Dehydrogenase, E1 component CJO35_12850 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CJO35_12850 IPR006258 Dihydrolipoamide dehydrogenase CJO35_12850 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CJO35_12850 IPR023753 FAD/NAD(P)-binding domain CJO35_12850 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_12850 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJO35_12850 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CJO35_12855 IPR000890 Aliphatic acid kinase, short-chain CJO35_12855 IPR023865 Aliphatic acid kinase, short-chain, conserved site CJO35_12855 IPR011245 Butyrate kinase CJO35_12860 IPR033524 Leu/Phe/Val dehydrogenases active site CJO35_12860 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CJO35_12860 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CJO35_12860 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal CJO35_12860 IPR036291 NAD(P)-binding domain superfamily CJO35_12860 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CJO35_12865 IPR002505 Phosphate acetyl/butaryl transferase CJO35_12865 IPR012147 Phosphate acetyl/butyryltransferase CJO35_12865 IPR014079 Phosphate butyryltransferase CJO35_12870 IPR000014 PAS domain CJO35_12870 IPR035965 PAS domain superfamily CJO35_12870 IPR013767 PAS fold CJO35_12870 IPR002078 RNA polymerase sigma factor 54 interaction domain CJO35_12870 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJO35_12870 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJO35_12870 IPR025944 Sigma-54 interaction domain, conserved site CJO35_12870 IPR036291 NAD(P)-binding domain superfamily CJO35_12870 IPR002197 DNA binding HTH domain, Fis-type CJO35_12870 IPR009057 Homeobox-like domain superfamily CJO35_12870 IPR003593 AAA+ ATPase domain CJO35_12870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12875 IPR020138 Uncharacterised protein family YqzF CJO35_12880 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CJO35_12880 IPR030395 Glycerophosphodiester phosphodiesterase domain CJO35_12885 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CJO35_12900 IPR001451 Hexapeptide repeat CJO35_12900 IPR011004 Trimeric LpxA-like superfamily CJO35_12900 IPR010493 Serine acetyltransferase, N-terminal CJO35_12900 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CJO35_12900 IPR005881 Serine O-acetyltransferase CJO35_12900 IPR018357 Hexapeptide transferase, conserved site CJO35_12910 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12910 IPR011006 CheY-like superfamily CJO35_12910 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_12910 IPR001789 Signal transduction response regulator, receiver domain CJO35_12910 IPR014879 Sporulation initiation factor Spo0A, C-terminal CJO35_12910 IPR012052 Sporulation transcription factor Spo0A CJO35_12915 IPR001478 PDZ domain CJO35_12915 IPR014219 Peptidase S55, sporulation stage IV, protein B CJO35_12915 IPR009003 Peptidase S1, PA clan CJO35_12915 IPR008763 Peptidase S55, SpoIVB CJO35_12915 IPR036034 PDZ superfamily CJO35_12915 IPR041489 PDZ domain 6 CJO35_12920 IPR004604 DNA recombination/repair protein RecN CJO35_12920 IPR038729 Rad50/SbcC-type AAA domain CJO35_12920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_12925 IPR020899 Arginine repressor, C-terminal CJO35_12925 IPR036251 Arginine repressor, C-terminal domain superfamily CJO35_12925 IPR001669 Arginine repressor CJO35_12925 IPR036390 Winged helix DNA-binding domain superfamily CJO35_12925 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_12925 IPR020900 Arginine repressor, DNA-binding domain CJO35_12930 IPR004538 Haemolysin A /rRNA methyltransferase TlyA CJO35_12930 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CJO35_12930 IPR002942 RNA-binding S4 domain CJO35_12930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_12930 IPR036986 RNA-binding S4 domain superfamily CJO35_12935 IPR033248 Transketolase, C-terminal domain CJO35_12935 IPR005474 Transketolase, N-terminal CJO35_12935 IPR005477 Deoxyxylulose-5-phosphate synthase CJO35_12935 IPR029061 Thiamin diphosphate-binding fold CJO35_12935 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CJO35_12935 IPR005475 Transketolase-like, pyrimidine-binding domain CJO35_12935 IPR020826 Transketolase binding site CJO35_12940 IPR008949 Isoprenoid synthase domain superfamily CJO35_12940 IPR000092 Polyprenyl synthetase CJO35_12940 IPR033749 Polyprenyl synthetase, conserved site CJO35_12945 IPR003761 Exonuclease VII, small subunit CJO35_12945 IPR037004 Exonuclease VII, small subunit superfamily CJO35_12950 IPR003753 Exonuclease VII, large subunit CJO35_12950 IPR025824 OB-fold nucleic acid binding domain CJO35_12950 IPR020579 Exonuclease VII, large subunit, C-terminal CJO35_12955 IPR036291 NAD(P)-binding domain superfamily CJO35_12955 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJO35_12955 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CJO35_12955 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CJO35_12955 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJO35_12960 IPR035926 NusB-like superfamily CJO35_12960 IPR011605 NusB antitermination factor CJO35_12960 IPR006027 NusB/RsmB/TIM44 CJO35_12965 IPR005531 Alkaline shock protein Asp23 CJO35_12970 IPR005482 Biotin carboxylase, C-terminal CJO35_12970 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CJO35_12970 IPR016185 Pre-ATP-grasp domain superfamily CJO35_12970 IPR005481 Biotin carboxylase-like, N-terminal domain CJO35_12970 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CJO35_12970 IPR011761 ATP-grasp fold CJO35_12970 IPR011054 Rudiment single hybrid motif CJO35_12970 IPR011764 Biotin carboxylation domain CJO35_12975 IPR011053 Single hybrid motif CJO35_12975 IPR001882 Biotin-binding site CJO35_12975 IPR001249 Acetyl-CoA biotin carboxyl carrier CJO35_12975 IPR000089 Biotin/lipoyl attachment CJO35_12980 IPR038503 Stage III sporulation protein AH-like superfamily CJO35_12980 IPR024232 Stage III sporulation protein AH-like CJO35_12985 IPR014195 Sporulation stage III, protein AG CJO35_12990 IPR014245 Sporulation stage III, protein AF CJO35_12995 IPR014194 Sporulation stage III, protein AE CJO35_13000 IPR025664 Stage III sporulation protein AC/AD family CJO35_13000 IPR014211 Stage III sporulation protein AD CJO35_13005 IPR025664 Stage III sporulation protein AC/AD family CJO35_13005 IPR009570 Stage III sporulation protein AC CJO35_13010 IPR014198 Stage III sporulation protein AB CJO35_13015 IPR014217 Sporulation stage III, protein AA CJO35_13015 IPR003593 AAA+ ATPase domain CJO35_13015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13020 IPR020390 Uncharacterised protein family YqhV CJO35_13025 IPR001059 Translation elongation factor P/YeiP, central CJO35_13025 IPR020599 Translation elongation factor P/YeiP CJO35_13025 IPR014722 Ribosomal protein L2, domain 2 CJO35_13025 IPR012340 Nucleic acid-binding, OB-fold CJO35_13025 IPR015365 Elongation factor P, C-terminal CJO35_13025 IPR013185 Translation elongation factor, KOW-like CJO35_13025 IPR013852 Translation elongation factor P/YeiP, conserved site CJO35_13025 IPR011768 Translation elongation factor P CJO35_13025 IPR008991 Translation protein SH3-like domain superfamily CJO35_13030 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CJO35_13030 IPR000587 Creatinase, N-terminal CJO35_13030 IPR036005 Creatinase/aminopeptidase-like CJO35_13030 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CJO35_13030 IPR001714 Peptidase M24, methionine aminopeptidase CJO35_13030 IPR000994 Peptidase M24 CJO35_13035 IPR036441 Dehydroquinase, class II superfamily CJO35_13035 IPR018509 Dehydroquinase, class II, conserved site CJO35_13035 IPR001874 Dehydroquinase, class II CJO35_13040 IPR024563 Uncharacterised protein family YqhR CJO35_13045 IPR010787 Protein of unknown function DUF1385 CJO35_13055 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CJO35_13055 IPR002641 Patatin-like phospholipase domain CJO35_13060 IPR036390 Winged helix DNA-binding domain superfamily CJO35_13060 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_13060 IPR022689 Iron dependent repressor CJO35_13060 IPR001367 Iron dependent repressor, metal binding and dimerisation domain CJO35_13060 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily CJO35_13060 IPR022897 HTH-type transcription regulator MntR CJO35_13060 IPR022687 DTXR-type HTH domain CJO35_13065 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CJO35_13065 IPR024898 Octanoyltransferase LipM CJO35_13070 IPR001763 Rhodanese-like domain CJO35_13070 IPR036873 Rhodanese-like domain superfamily CJO35_13075 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CJO35_13080 IPR035906 MetI-like superfamily CJO35_13080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_13085 IPR003593 AAA+ ATPase domain CJO35_13085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13085 IPR005892 Glycine betaine transport ATP-binding subunit CJO35_13085 IPR000644 CBS domain CJO35_13085 IPR017871 ABC transporter, conserved site CJO35_13085 IPR003439 ABC transporter-like CJO35_13090 IPR020581 Glycine cleavage system P protein CJO35_13090 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 CJO35_13090 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_13090 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_13090 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_13095 IPR020581 Glycine cleavage system P protein CJO35_13095 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_13095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_13095 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 CJO35_13095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_13100 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CJO35_13100 IPR022903 Glycine cleavage system T protein, bacteria CJO35_13100 IPR006222 Aminomethyltransferase, folate-binding domain CJO35_13100 IPR028896 Aminomethyltransferase-like CJO35_13100 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CJO35_13100 IPR006223 Glycine cleavage system T protein CJO35_13100 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CJO35_13105 IPR000330 SNF2-related, N-terminal domain CJO35_13105 IPR001650 Helicase, C-terminal CJO35_13105 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_13105 IPR038718 SNF2-like, N-terminal domain superfamily CJO35_13105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13110 IPR024562 Uncharacterised protein family YqhG CJO35_13115 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain CJO35_13115 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily CJO35_13120 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_13120 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_13120 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain CJO35_13120 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily CJO35_13125 IPR023833 Signal peptide, camelysin CJO35_13125 IPR022121 Peptidase M73, camelysin CJO35_13130 IPR001733 Peptidase S26B CJO35_13130 IPR036286 LexA/Signal peptidase-like superfamily CJO35_13135 IPR023833 Signal peptide, camelysin CJO35_13135 IPR023848 TasA anchoring/assembly protein CJO35_13140 IPR024987 Protein of unknown function DUF3889 CJO35_13145 IPR025622 YqzE-like protein CJO35_13155 IPR016977 Competence operon G, ComGF CJO35_13160 IPR012902 Prokaryotic N-terminal methylation site CJO35_13165 IPR012902 Prokaryotic N-terminal methylation site CJO35_13165 IPR002416 Type II secretion system protein H CJO35_13165 IPR016785 ComG operon protein 4 CJO35_13170 IPR012902 Prokaryotic N-terminal methylation site CJO35_13170 IPR016940 ComG operon protein C CJO35_13170 IPR000983 Bacterial general secretion pathway protein G-type pilin CJO35_13175 IPR003004 GspF/PilC family CJO35_13175 IPR001992 Type II secretion system conserved site CJO35_13175 IPR018076 Type II secretion system F domain CJO35_13175 IPR042094 Type II secretion system F domain superfamily CJO35_13180 IPR001482 Type II/IV secretion system protein CJO35_13180 IPR003593 AAA+ ATPase domain CJO35_13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13185 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain CJO35_13185 IPR002645 STAS domain CJO35_13185 IPR036513 STAS domain superfamily CJO35_13195 IPR036249 Thioredoxin-like superfamily CJO35_13195 IPR006504 Transcriptional regulator Spx/MgsR CJO35_13195 IPR006660 Arsenate reductase-like CJO35_13200 IPR020254 Protein of unknown function DUF2626 CJO35_13205 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_13205 IPR001279 Metallo-beta-lactamase CJO35_13210 IPR024490 Protein of unknown function DUF2759 CJO35_13215 IPR002767 Thiamine-binding protein CJO35_13215 IPR029756 MTH1187/YkoF-like CJO35_13225 IPR034274 ENP1, carboxypeptidase domain CJO35_13225 IPR000834 Peptidase M14, carboxypeptidase A CJO35_13230 IPR002491 ABC transporter periplasmic binding domain CJO35_13235 IPR000917 Sulfatase, N-terminal CJO35_13235 IPR012160 Lipoteichoic acid synthase-like CJO35_13235 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_13240 IPR000600 ROK family CJO35_13240 IPR004654 Glucokinase ROK CJO35_13245 IPR023164 YqgQ-like superfamily CJO35_13245 IPR009256 Protein of unknown function DUF910 CJO35_13250 IPR004995 Bacillus/Clostridium Ger spore germination protein CJO35_13255 IPR035952 Rhomboid-like superfamily CJO35_13255 IPR022764 Peptidase S54, rhomboid domain CJO35_13255 IPR013026 Tetratricopeptide repeat-containing domain CJO35_13255 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_13255 IPR019734 Tetratricopeptide repeat CJO35_13265 IPR037171 NagB/RpiA transferase-like CJO35_13265 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CJO35_13265 IPR002698 5-formyltetrahydrofolate cyclo-ligase CJO35_13270 IPR011332 Zinc-binding ribosomal protein CJO35_13270 IPR018264 Ribosomal protein L33, conserved site CJO35_13270 IPR001705 Ribosomal protein L33 CJO35_13270 IPR038584 Ribosomal protein L33 superfamily CJO35_13275 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJO35_13275 IPR001296 Glycosyl transferase, family 1 CJO35_13295 IPR005670 Phosphate transport system permease protein 1 CJO35_13295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13295 IPR015850 ABC transporter, phosphate import, PstB CJO35_13295 IPR017871 ABC transporter, conserved site CJO35_13295 IPR003439 ABC transporter-like CJO35_13295 IPR003593 AAA+ ATPase domain CJO35_13300 IPR005670 Phosphate transport system permease protein 1 CJO35_13300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13300 IPR015850 ABC transporter, phosphate import, PstB CJO35_13300 IPR017871 ABC transporter, conserved site CJO35_13300 IPR003593 AAA+ ATPase domain CJO35_13300 IPR003439 ABC transporter-like CJO35_13305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_13305 IPR035906 MetI-like superfamily CJO35_13305 IPR005672 Phosphate transport system permease protein PstA CJO35_13310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_13310 IPR035906 MetI-like superfamily CJO35_13310 IPR011864 Phosphate ABC transporter, permease protein PstC CJO35_13315 IPR011862 Phosphate binding protein CJO35_13315 IPR024370 PBP domain CJO35_13325 IPR011701 Major facilitator superfamily CJO35_13325 IPR036259 MFS transporter superfamily CJO35_13330 IPR019831 Manganese/iron superoxide dismutase, N-terminal CJO35_13330 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CJO35_13330 IPR019832 Manganese/iron superoxide dismutase, C-terminal CJO35_13330 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CJO35_13330 IPR019833 Manganese/iron superoxide dismutase, binding site CJO35_13330 IPR001189 Manganese/iron superoxide dismutase CJO35_13335 IPR007403 Protein of unknown function DUF456 CJO35_13340 IPR009574 Protein of unknown function DUF1189 CJO35_13345 IPR018392 LysM domain CJO35_13350 IPR011005 Dihydropteroate synthase-like CJO35_13350 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CJO35_13350 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CJO35_13360 IPR009206 Nucleotidase, putative CJO35_13360 IPR036412 HAD-like superfamily CJO35_13360 IPR023214 HAD superfamily CJO35_13365 IPR002481 Ferric-uptake regulator CJO35_13365 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_13365 IPR036390 Winged helix DNA-binding domain superfamily CJO35_13370 IPR037294 ABC transporter, BtuC-like CJO35_13370 IPR001626 ABC transporter, TroCD-like CJO35_13375 IPR003593 AAA+ ATPase domain CJO35_13375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13375 IPR017871 ABC transporter, conserved site CJO35_13375 IPR003439 ABC transporter-like CJO35_13380 IPR003740 Uncharacterised membrane protein YitT CJO35_13380 IPR019264 Domain of unknown function DUF2179 CJO35_13380 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_13385 IPR020277 Protein of unknown function DUF2624 CJO35_13390 IPR036237 Xylose isomerase-like superfamily CJO35_13390 IPR001719 AP endonuclease 2 CJO35_13390 IPR013022 Xylose isomerase-like, TIM barrel domain CJO35_13390 IPR018246 AP endonuclease 2, zinc binding site CJO35_13395 IPR030881 DEAD-box ATP-dependent RNA helicase CshB CJO35_13395 IPR014014 RNA helicase, DEAD-box type, Q motif CJO35_13395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13395 IPR001650 Helicase, C-terminal CJO35_13395 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_13395 IPR011545 DEAD/DEAH box helicase domain CJO35_13405 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CJO35_13410 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_13410 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria CJO35_13410 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CJO35_13410 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CJO35_13415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_13415 IPR006901 tRNA methyltransferase TrmK CJO35_13420 IPR007581 Endonuclease V CJO35_13425 IPR007581 Endonuclease V CJO35_13470 IPR027797 Pre-toxin TG domain CJO35_13470 IPR006829 LXG domain CJO35_13470 IPR025968 YwqJ-like deaminase CJO35_13485 IPR009056 Cytochrome c-like domain CJO35_13485 IPR012218 Cytochrome c, Bacillus subtilis c550-related CJO35_13485 IPR036909 Cytochrome c-like domain superfamily CJO35_13490 IPR028630 RNA polymerase sigma factor RpoD CJO35_13490 IPR007127 RNA polymerase sigma factor 70, region 1.1 CJO35_13490 IPR007630 RNA polymerase sigma-70 region 4 CJO35_13490 IPR007624 RNA polymerase sigma-70 region 3 CJO35_13490 IPR007627 RNA polymerase sigma-70 region 2 CJO35_13490 IPR009042 RNA polymerase sigma-70 region 1.2 CJO35_13490 IPR000943 RNA polymerase sigma-70 CJO35_13490 IPR014284 RNA polymerase sigma-70 like domain CJO35_13490 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CJO35_13490 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_13490 IPR042189 Sigma-70 factor, region 1.1 superfamily CJO35_13490 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_13490 IPR013325 RNA polymerase sigma factor, region 2 CJO35_13495 IPR036977 DNA Primase, CHC2-type zinc finger CJO35_13495 IPR030846 DNA primase DnaG, bacteria CJO35_13495 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CJO35_13495 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CJO35_13495 IPR034151 Bacterial DnaG primase, TOPRIM domain CJO35_13495 IPR006171 TOPRIM domain CJO35_13495 IPR013264 DNA primase, catalytic core, N-terminal CJO35_13495 IPR002694 Zinc finger, CHC2-type CJO35_13495 IPR006295 DNA primase, DnaG CJO35_13495 IPR019475 DNA primase, DnaB-helicase binding domain CJO35_13495 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CJO35_13500 IPR003791 Protein of unknown function UPF0178 CJO35_13505 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CJO35_13505 IPR005177 Bifunctional kinase-pyrophosphorylase CJO35_13510 IPR000644 CBS domain CJO35_13510 IPR016842 Protein of unknown function UCP026546, HtH-CBS CJO35_13510 IPR013196 Helix-turn-helix, type 11 CJO35_13510 IPR036390 Winged helix DNA-binding domain superfamily CJO35_13510 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_13515 IPR006194 Glycine-tRNA synthetase, heterodimeric CJO35_13515 IPR015944 Glycine-tRNA ligase, beta subunit CJO35_13520 IPR002310 Glycine-tRNA ligase, alpha subunit CJO35_13520 IPR006194 Glycine-tRNA synthetase, heterodimeric CJO35_13525 IPR003717 Recombination protein O, RecO CJO35_13525 IPR042242 Recombination protein O, zinc-binding domain CJO35_13525 IPR022572 DNA replication/recombination mediator RecO, N-terminal CJO35_13525 IPR037278 ARFGAP/RecO-like zinc finger CJO35_13525 IPR012340 Nucleic acid-binding, OB-fold CJO35_13530 IPR025617 YqzL-like protein CJO35_13535 IPR004044 K Homology domain, type 2 CJO35_13535 IPR015946 K homology domain-like, alpha/beta CJO35_13535 IPR030388 Era-type guanine nucleotide-binding (G) domain CJO35_13535 IPR005225 Small GTP-binding protein domain CJO35_13535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13535 IPR005662 GTP-binding protein Era CJO35_13535 IPR009019 K homology domain superfamily, prokaryotic type CJO35_13535 IPR006073 GTP binding domain CJO35_13540 IPR002125 Cytidine and deoxycytidylate deaminase domain CJO35_13540 IPR016192 APOBEC/CMP deaminase, zinc-binding CJO35_13540 IPR006262 Cytidine deaminase, homotetrameric CJO35_13540 IPR016193 Cytidine deaminase-like CJO35_13545 IPR000829 DAGK family CJO35_13545 IPR033717 Undecaprenol kinase CJO35_13545 IPR036945 Diacylglycerol kinase (DAGK) superfamily CJO35_13550 IPR020549 Endoribonuclease YbeY, conserved site CJO35_13550 IPR002036 Endoribonuclease YbeY CJO35_13550 IPR023091 Metalloprotease catalytic domain superfamily, predicted CJO35_13555 IPR003607 HD/PDEase domain CJO35_13555 IPR006674 HD domain CJO35_13555 IPR006675 HDIG domain CJO35_13555 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain CJO35_13555 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain CJO35_13560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13560 IPR003714 PhoH-like protein CJO35_13565 IPR010690 Putative stage IV sporulation YqfD CJO35_13570 IPR022476 Sporulation protein YabP/YqfC CJO35_13570 IPR022477 Sporulation protein YqfC CJO35_13575 IPR016788 Uncharacterised conserved protein UCP021361 CJO35_13580 IPR022853 Uncharacterised protein family YdfA-immunity CJO35_13585 IPR002810 NfeD-like, C-terminal domain CJO35_13585 IPR002825 Peptidase S49, serine-peptidase prokaryotes CJO35_13585 IPR029045 ClpP/crotonase-like domain superfamily CJO35_13590 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CJO35_13590 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CJO35_13590 IPR042184 YqeY/Aim41, N-terminal domain CJO35_13590 IPR019004 Uncharacterised protein YqeY/Aim41 CJO35_13595 IPR018278 Ribosomal protein S21, conserved site CJO35_13595 IPR001911 Ribosomal protein S21 CJO35_13595 IPR038380 Ribosomal protein S21 superfamily CJO35_13600 IPR003841 Sodium-dependent phosphate transport protein CJO35_13600 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein CJO35_13605 IPR028581 Deoxyribose-phosphate aldolase type I CJO35_13605 IPR002915 DeoC/FbaB/ lacD aldolase CJO35_13605 IPR013785 Aldolase-type TIM barrel CJO35_13605 IPR011343 Deoxyribose-phosphate aldolase CJO35_13610 IPR007197 Radical SAM CJO35_13610 IPR013848 Methylthiotransferase, N-terminal CJO35_13610 IPR006467 MiaB-like tRNA modifying enzyme CJO35_13610 IPR023404 Radical SAM, alpha/beta horseshoe CJO35_13610 IPR020612 Methylthiotransferase, conserved site CJO35_13610 IPR002792 TRAM domain CJO35_13610 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase CJO35_13610 IPR038135 Methylthiotransferase, N-terminal domain superfamily CJO35_13610 IPR005839 Methylthiotransferase CJO35_13610 IPR006638 Elp3/MiaB/NifB CJO35_13615 IPR015947 PUA-like superfamily CJO35_13615 IPR029028 Alpha/beta knot methyltransferases CJO35_13615 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJO35_13615 IPR006700 Ribosomal RNA small subunit methyltransferase E CJO35_13620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_13620 IPR004498 Ribosomal protein L11 methyltransferase CJO35_13625 IPR001623 DnaJ domain CJO35_13625 IPR018253 DnaJ domain, conserved site CJO35_13625 IPR002939 Chaperone DnaJ, C-terminal CJO35_13625 IPR008971 HSP40/DnaJ peptide-binding CJO35_13625 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CJO35_13625 IPR012724 Chaperone DnaJ CJO35_13625 IPR036869 Chaperone J-domain superfamily CJO35_13625 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CJO35_13630 IPR013126 Heat shock protein 70 family CJO35_13630 IPR018181 Heat shock protein 70, conserved site CJO35_13630 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CJO35_13630 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CJO35_13630 IPR012725 Chaperone DnaK CJO35_13635 IPR000740 GrpE nucleotide exchange factor CJO35_13635 IPR013805 GrpE nucleotide exchange factor, coiled-coil CJO35_13635 IPR009012 GrpE nucleotide exchange factor, head CJO35_13640 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CJO35_13640 IPR002571 Heat-inducible transcription repressor HrcA CJO35_13640 IPR029016 GAF-like domain superfamily CJO35_13640 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_13640 IPR036390 Winged helix DNA-binding domain superfamily CJO35_13640 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CJO35_13645 IPR023404 Radical SAM, alpha/beta horseshoe CJO35_13645 IPR006638 Elp3/MiaB/NifB CJO35_13645 IPR004559 Heme chaperone HemW-like CJO35_13645 IPR034505 Anaerobic coproporphyrinogen-III oxidase CJO35_13645 IPR010723 HemN, C-terminal CJO35_13645 IPR007197 Radical SAM CJO35_13650 IPR013842 GTP-binding protein LepA, C-terminal CJO35_13650 IPR000640 Elongation factor EFG, domain V-like CJO35_13650 IPR004161 Translation elongation factor EFTu-like, domain 2 CJO35_13650 IPR035654 Elongation factor 4, domain IV CJO35_13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13650 IPR005225 Small GTP-binding protein domain CJO35_13650 IPR035647 EF-G domain III/V-like CJO35_13650 IPR000795 Transcription factor, GTP-binding domain CJO35_13650 IPR038363 LepA, C-terminal domain superfamily CJO35_13650 IPR031157 Tr-type G domain, conserved site CJO35_13650 IPR009000 Translation protein, beta-barrel domain superfamily CJO35_13650 IPR006297 Elongation factor 4 CJO35_13655 IPR020534 Uncharacterised protein family YqxA CJO35_13660 IPR010897 Sporulation stage II, protein P CJO35_13665 IPR005080 Peptidase A25, germination protease CJO35_13665 IPR023430 Peptidase HybD-like domain superfamily CJO35_13670 IPR036510 Ribosomal protein S20 superfamily CJO35_13670 IPR002583 Ribosomal protein S20 CJO35_13675 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CJO35_13675 IPR010372 DNA polymerase III delta, N-terminal CJO35_13675 IPR005790 DNA polymerase III, delta subunit CJO35_13675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13680 IPR025416 YqzM-like protein CJO35_13685 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_13685 IPR035681 ComA-like, MBL domain CJO35_13685 IPR004797 Competence protein ComEC/Rec2 CJO35_13685 IPR025405 Domain of unknown function DUF4131 CJO35_13685 IPR001279 Metallo-beta-lactamase CJO35_13685 IPR004477 ComEC/Rec2-related protein CJO35_13690 IPR016193 Cytidine deaminase-like CJO35_13690 IPR002125 Cytidine and deoxycytidylate deaminase domain CJO35_13690 IPR013404 Competence operon E, ComEB CJO35_13690 IPR015517 Deoxycytidylate deaminase-related CJO35_13690 IPR016192 APOBEC/CMP deaminase, zinc-binding CJO35_13690 IPR035105 Deoxycytidylate deaminase domain CJO35_13695 IPR010994 RuvA domain 2-like CJO35_13695 IPR019554 Soluble ligand binding domain CJO35_13695 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CJO35_13695 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CJO35_13695 IPR004787 Competence protein ComEA CJO35_13700 IPR036291 NAD(P)-binding domain superfamily CJO35_13700 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_13700 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CJO35_13700 IPR000304 Pyrroline-5-carboxylate reductase CJO35_13700 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CJO35_13705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_13705 IPR041698 Methyltransferase domain 25 CJO35_13710 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CJO35_13715 IPR005249 Conserved hypothetical protein CHP00488 CJO35_13715 IPR006674 HD domain CJO35_13715 IPR003607 HD/PDEase domain CJO35_13720 IPR004821 Cytidyltransferase-like domain CJO35_13720 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CJO35_13720 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_13725 IPR001890 RNA-binding, CRM domain CJO35_13725 IPR017924 RNA-binding protein YhbY CJO35_13725 IPR035920 YhbY-like superfamily CJO35_13730 IPR041121 SDH, C-terminal CJO35_13730 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CJO35_13730 IPR011342 Shikimate dehydrogenase CJO35_13730 IPR022893 Shikimate dehydrogenase family CJO35_13730 IPR036291 NAD(P)-binding domain superfamily CJO35_13730 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CJO35_13735 IPR006073 GTP binding domain CJO35_13735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13735 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH CJO35_13735 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CJO35_13740 IPR023214 HAD superfamily CJO35_13740 IPR036412 HAD-like superfamily CJO35_13740 IPR006439 HAD hydrolase, subfamily IA CJO35_13740 IPR010021 HAD-superfamily phosphatase, YqeG-like CJO35_13740 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CJO35_13745 IPR036916 Sporulation inhibitor A superfamily CJO35_13745 IPR015064 Sporulation inhibitor A CJO35_13750 IPR001087 GDSL lipase/esterase CJO35_13750 IPR036514 SGNH hydrolase superfamily CJO35_13755 IPR027365 GNAT acetyltransferase YdfB-like CJO35_13755 IPR000182 GNAT domain CJO35_13755 IPR016181 Acyl-CoA N-acyltransferase CJO35_13760 IPR018745 Domain of unknown function DUF2294 CJO35_13765 IPR006478 Formate dehydrogenase, alpha subunit CJO35_13765 IPR006657 Molybdopterin dinucleotide-binding domain CJO35_13765 IPR006656 Molybdopterin oxidoreductase CJO35_13765 IPR041924 Formate dehydrogenase H, N-terminal CJO35_13765 IPR009010 Aspartate decarboxylase-like domain superfamily CJO35_13765 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJO35_13765 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CJO35_13765 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_13765 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CJO35_13765 IPR036010 2Fe-2S ferredoxin-like superfamily CJO35_13765 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CJO35_13770 IPR012440 Protein of unknown function DUF1641 CJO35_13780 IPR014284 RNA polymerase sigma-70 like domain CJO35_13780 IPR000943 RNA polymerase sigma-70 CJO35_13780 IPR007627 RNA polymerase sigma-70 region 2 CJO35_13780 IPR013325 RNA polymerase sigma factor, region 2 CJO35_13780 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_13780 IPR007630 RNA polymerase sigma-70 region 4 CJO35_13790 IPR003593 AAA+ ATPase domain CJO35_13790 IPR011527 ABC transporter type 1, transmembrane domain CJO35_13790 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_13790 IPR003439 ABC transporter-like CJO35_13790 IPR017871 ABC transporter, conserved site CJO35_13790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_13790 IPR039421 Type I protein exporter CJO35_13805 IPR010897 Sporulation stage II, protein P CJO35_13815 IPR014284 RNA polymerase sigma-70 like domain CJO35_13815 IPR000943 RNA polymerase sigma-70 CJO35_13815 IPR013325 RNA polymerase sigma factor, region 2 CJO35_13815 IPR007627 RNA polymerase sigma-70 region 2 CJO35_13815 IPR007630 RNA polymerase sigma-70 region 4 CJO35_13815 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_13835 IPR031374 Uncharacterised protein family UPF0715 CJO35_13860 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CJO35_13860 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CJO35_13860 IPR017782 Hydroxyacylglutathione hydrolase CJO35_13860 IPR001279 Metallo-beta-lactamase CJO35_13860 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_13870 IPR001789 Signal transduction response regulator, receiver domain CJO35_13870 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_13870 IPR011006 CheY-like superfamily CJO35_13870 IPR000792 Transcription regulator LuxR, C-terminal CJO35_13875 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_13875 IPR017203 Signal transduction histidine kinase, NreB CJO35_13875 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_13875 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_13875 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_13875 IPR005467 Histidine kinase domain CJO35_13880 IPR036249 Thioredoxin-like superfamily CJO35_13880 IPR013766 Thioredoxin domain CJO35_13885 IPR002781 Transmembrane protein TauE-like CJO35_13890 IPR036868 TusA-like domain superfamily CJO35_13890 IPR001455 TusA-like domain CJO35_13895 IPR001763 Rhodanese-like domain CJO35_13895 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_13895 IPR036873 Rhodanese-like domain superfamily CJO35_13895 IPR001279 Metallo-beta-lactamase CJO35_13900 IPR036868 TusA-like domain superfamily CJO35_13900 IPR001763 Rhodanese-like domain CJO35_13900 IPR036873 Rhodanese-like domain superfamily CJO35_13900 IPR001455 TusA-like domain CJO35_13905 IPR027396 DsrEFH-like CJO35_13905 IPR032836 DsrE2-like family CJO35_13910 IPR038390 Metal-sensitive transcriptional repressor superfamily CJO35_13910 IPR003735 Metal-sensitive transcriptional repressor CJO35_13915 IPR010233 Ubiquinone biosynthesis O-methyltransferase CJO35_13915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_13950 IPR002696 Putative membrane protein insertion efficiency factor CJO35_13955 IPR013785 Aldolase-type TIM barrel CJO35_13955 IPR030656 Delta-aminolevulinic acid dehydratase, active site CJO35_13955 IPR001731 Delta-aminolevulinic acid dehydratase CJO35_13960 IPR017552 3-hexulose-6-phosphate isomerase CJO35_13960 IPR001347 Sugar isomerase (SIS) CJO35_13965 IPR013785 Aldolase-type TIM barrel CJO35_13965 IPR017553 3-hexulose-6-phosphate synthase CJO35_13965 IPR041710 HPS/KGPDC domain CJO35_13965 IPR011060 Ribulose-phosphate binding barrel CJO35_13965 IPR001754 Orotidine 5'-phosphate decarboxylase domain CJO35_13970 IPR036390 Winged helix DNA-binding domain superfamily CJO35_13970 IPR002577 Helix-turn-helix, HxlR type CJO35_13970 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_13975 IPR005804 Fatty acid desaturase domain CJO35_13980 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_13980 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_13985 IPR011006 CheY-like superfamily CJO35_13985 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_13985 IPR000792 Transcription regulator LuxR, C-terminal CJO35_13985 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_13985 IPR001789 Signal transduction response regulator, receiver domain CJO35_13990 IPR023753 FAD/NAD(P)-binding domain CJO35_13990 IPR022890 Ferredoxin--NADP reductase, type 2 CJO35_13990 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_13995 IPR011980 Nickel ABC transporter, substrate-binding protein NikA CJO35_13995 IPR000914 Solute-binding protein family 5 domain CJO35_13995 IPR023765 Solute-binding protein family 5, conserved site CJO35_13995 IPR039424 Solute-binding protein family 5 CJO35_13995 IPR030678 Peptide/nickel binding protein, MppA-type CJO35_14000 IPR014156 Nickel ABC transporter, permease subunit NikB CJO35_14000 IPR035906 MetI-like superfamily CJO35_14000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_14010 IPR017871 ABC transporter, conserved site CJO35_14010 IPR003439 ABC transporter-like CJO35_14010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14010 IPR003593 AAA+ ATPase domain CJO35_14010 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_14015 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CJO35_14015 IPR017871 ABC transporter, conserved site CJO35_14015 IPR003439 ABC transporter-like CJO35_14015 IPR003593 AAA+ ATPase domain CJO35_14015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14030 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal CJO35_14030 IPR020449 Transcription regulator HTH, AraC- type CJO35_14030 IPR009057 Homeobox-like domain superfamily CJO35_14030 IPR018060 DNA binding HTH domain, AraC-type CJO35_14035 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_14035 IPR036291 NAD(P)-binding domain superfamily CJO35_14050 IPR002397 Cytochrome P450, B-class CJO35_14050 IPR036396 Cytochrome P450 superfamily CJO35_14050 IPR001128 Cytochrome P450 CJO35_14050 IPR017972 Cytochrome P450, conserved site CJO35_14055 IPR002781 Transmembrane protein TauE-like CJO35_14070 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_14070 IPR036291 NAD(P)-binding domain superfamily CJO35_14075 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_14075 IPR001362 Glycoside hydrolase, family 32 CJO35_14075 IPR018053 Glycoside hydrolase, family 32, active site CJO35_14075 IPR013189 Glycosyl hydrolase family 32, C-terminal CJO35_14075 IPR013148 Glycosyl hydrolase family 32, N-terminal CJO35_14075 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_14080 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component CJO35_14085 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit CJO35_14090 IPR004720 Phosphotransferase system, sorbose subfamily IIB component CJO35_14090 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup CJO35_14090 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily CJO35_14095 IPR033887 PTS system mannose/sorbose specific IIA subunit CJO35_14095 IPR013789 Phosphotransferase system, mannose family IIA component CJO35_14095 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CJO35_14095 IPR004701 Phosphotransferase system, mannose-type IIA component CJO35_14100 IPR011608 PRD domain CJO35_14100 IPR036634 PRD domain superfamily CJO35_14100 IPR003593 AAA+ ATPase domain CJO35_14100 IPR033887 PTS system mannose/sorbose specific IIA subunit CJO35_14100 IPR002078 RNA polymerase sigma factor 54 interaction domain CJO35_14100 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJO35_14100 IPR001550 Transcription antiterminator, conserved site CJO35_14100 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14100 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CJO35_14100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14100 IPR004701 Phosphotransferase system, mannose-type IIA component CJO35_14110 IPR025424 YrhK domain CJO35_14125 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14125 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CJO35_14125 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CJO35_14125 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CJO35_14125 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CJO35_14125 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CJO35_14130 IPR036812 NADP-dependent oxidoreductase domain superfamily CJO35_14130 IPR018170 Aldo/keto reductase, conserved site CJO35_14130 IPR023210 NADP-dependent oxidoreductase domain CJO35_14130 IPR020471 Aldo/keto reductase CJO35_14135 IPR036259 MFS transporter superfamily CJO35_14135 IPR020846 Major facilitator superfamily domain CJO35_14135 IPR011701 Major facilitator superfamily CJO35_14140 IPR002577 Helix-turn-helix, HxlR type CJO35_14140 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14140 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14145 IPR029062 Class I glutamine amidotransferase-like CJO35_14145 IPR005320 Peptidase S51 CJO35_14145 IPR023172 Peptidase S51, dipeptidase E CJO35_14150 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CJO35_14150 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CJO35_14150 IPR039793 Uroporphyrinogen-III synthase CJO35_14160 IPR002491 ABC transporter periplasmic binding domain CJO35_14165 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14165 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14165 IPR005119 LysR, substrate-binding CJO35_14165 IPR000847 Transcription regulator HTH, LysR CJO35_14170 IPR020846 Major facilitator superfamily domain CJO35_14170 IPR036259 MFS transporter superfamily CJO35_14170 IPR011701 Major facilitator superfamily CJO35_14180 IPR001128 Cytochrome P450 CJO35_14180 IPR001094 Flavodoxin-like CJO35_14180 IPR008254 Flavodoxin/nitric oxide synthase CJO35_14180 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CJO35_14180 IPR029039 Flavoprotein-like superfamily CJO35_14180 IPR036396 Cytochrome P450 superfamily CJO35_14180 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase CJO35_14180 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CJO35_14180 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CJO35_14180 IPR001433 Oxidoreductase FAD/NAD(P)-binding CJO35_14180 IPR017938 Riboflavin synthase-like beta-barrel CJO35_14180 IPR017972 Cytochrome P450, conserved site CJO35_14180 IPR017927 FAD-binding domain, ferredoxin reductase-type CJO35_14180 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CJO35_14185 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_14185 IPR001647 DNA-binding HTH domain, TetR-type CJO35_14185 IPR009057 Homeobox-like domain superfamily CJO35_14185 IPR032551 HTH-type transcriptional repressor, C-terminal CJO35_14190 IPR015500 Peptidase S8, subtilisin-related CJO35_14190 IPR000209 Peptidase S8/S53 domain CJO35_14190 IPR041498 Bacterial Ig domain CJO35_14190 IPR013783 Immunoglobulin-like fold CJO35_14190 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_14190 IPR034084 Thermitase-like, domain CJO35_14190 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_14190 IPR036852 Peptidase S8/S53 domain superfamily CJO35_14195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_14195 IPR013216 Methyltransferase type 11 CJO35_14210 IPR012655 Uncharacterised protein YrzI CJO35_14215 IPR025418 YrhC-like protein CJO35_14220 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_14220 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CJO35_14220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_14220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_14225 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJO35_14225 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CJO35_14225 IPR001926 Pyridoxal-phosphate dependent enzyme CJO35_14230 IPR035994 Nucleoside phosphorylase superfamily CJO35_14230 IPR000845 Nucleoside phosphorylase domain CJO35_14230 IPR010049 MTA/SAH nucleosidase CJO35_14235 IPR041698 Methyltransferase domain 25 CJO35_14235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_14235 IPR023553 Uncharacterised methyltransferase, YrrT CJO35_14235 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CJO35_14240 IPR019686 Protein of unknown function DUF2536 CJO35_14245 IPR009988 Domain of unknown function DUF1510 CJO35_14250 IPR012338 Beta-lactamase/transpeptidase-like CJO35_14250 IPR005311 Penicillin-binding protein, dimerisation domain CJO35_14250 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CJO35_14250 IPR001460 Penicillin-binding protein, transpeptidase CJO35_14255 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CJO35_14255 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CJO35_14255 IPR006359 Transcription elongation factor GreA CJO35_14255 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CJO35_14255 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CJO35_14255 IPR023459 Transcription elongation factor GreA/GreB family CJO35_14255 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CJO35_14255 IPR028624 Transcription elongation factor GreA/GreB CJO35_14260 IPR000764 Uridine kinase-like CJO35_14260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14260 IPR006083 Phosphoribulokinase/uridine kinase CJO35_14260 IPR026008 Uridine kinase CJO35_14280 IPR003770 Endolytic murein transglycosylase CJO35_14285 IPR009711 Uncharacterised protein family UPF0473 CJO35_14290 IPR012337 Ribonuclease H-like superfamily CJO35_14290 IPR005227 Putative pre-16S rRNA nuclease CJO35_14290 IPR006641 YqgF/RNase H-like domain CJO35_14290 IPR037027 YqgF/RNase H-like domain superfamily CJO35_14295 IPR009309 IreB regulatory phosphoprotein CJO35_14300 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CJO35_14300 IPR003156 DHHA1 domain CJO35_14300 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CJO35_14300 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CJO35_14300 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CJO35_14300 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CJO35_14300 IPR002318 Alanine-tRNA ligase, class IIc CJO35_14300 IPR009000 Translation protein, beta-barrel domain superfamily CJO35_14300 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CJO35_14305 IPR002549 Transmembrane protein TqsA-like CJO35_14310 IPR025029 Protein of unknown function DUF3918 CJO35_14320 IPR011033 PRC-barrel-like superfamily CJO35_14320 IPR027275 PRC-barrel domain CJO35_14325 IPR041451 RecD-like DNA helicase, SH3 domain CJO35_14325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14325 IPR029493 RecD helicase-like helix-hairpin-helix domain CJO35_14325 IPR006345 RecD-like DNA helicase CJO35_14325 IPR027785 UvrD-like helicase C-terminal domain CJO35_14325 IPR003593 AAA+ ATPase domain CJO35_14330 IPR019734 Tetratricopeptide repeat CJO35_14330 IPR013026 Tetratricopeptide repeat-containing domain CJO35_14330 IPR013105 Tetratricopeptide repeat 2 CJO35_14330 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_14335 IPR023382 Adenine nucleotide alpha hydrolase-like domains CJO35_14335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_14335 IPR004506 tRNA-specific 2-thiouridylase CJO35_14340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_14340 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_14340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_14340 IPR000192 Aminotransferase class V domain CJO35_14340 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJO35_14340 IPR016454 Cysteine desulfurase CJO35_14345 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14345 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14345 IPR030489 Transcription regulator Rrf2-type, conserved site CJO35_14345 IPR000944 Transcription regulator Rrf2-type CJO35_14350 IPR021886 MgsA AAA+ ATPase C-terminal CJO35_14350 IPR032423 AAA C-terminal domain CJO35_14350 IPR008824 RuvB-like P-loop domain CJO35_14350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14350 IPR003593 AAA+ ATPase domain CJO35_14350 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CJO35_14355 IPR000594 THIF-type NAD/FAD binding fold CJO35_14355 IPR035985 Ubiquitin-activating enzyme CJO35_14365 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CJO35_14365 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_14365 IPR004524 Aspartate-tRNA ligase, type 1 CJO35_14365 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CJO35_14365 IPR004115 GAD-like domain superfamily CJO35_14365 IPR029351 GAD domain CJO35_14365 IPR012340 Nucleic acid-binding, OB-fold CJO35_14365 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CJO35_14370 IPR036621 Anticodon-binding domain superfamily CJO35_14370 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CJO35_14370 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CJO35_14370 IPR004154 Anticodon-binding CJO35_14370 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_14370 IPR015807 Histidine-tRNA ligase CJO35_14370 IPR033656 Histidyl-anticodon-binding CJO35_14380 IPR003646 SH3-like domain, bacterial-type CJO35_14380 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted CJO35_14380 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CJO35_14385 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CJO35_14385 IPR003732 D-aminoacyl-tRNA deacylase DTD CJO35_14390 IPR012676 TGS-like CJO35_14390 IPR004095 TGS CJO35_14390 IPR007685 RelA/SpoT CJO35_14390 IPR004811 RelA/SpoT family CJO35_14390 IPR033655 RelA, TGS domain CJO35_14390 IPR012675 Beta-grasp domain superfamily CJO35_14390 IPR002912 ACT domain CJO35_14390 IPR003607 HD/PDEase domain CJO35_14395 IPR005764 Adenine phosphoribosyl transferase CJO35_14395 IPR000836 Phosphoribosyltransferase domain CJO35_14395 IPR029057 Phosphoribosyltransferase-like CJO35_14400 IPR041122 RecJ, OB domain CJO35_14400 IPR001667 DDH domain CJO35_14400 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal CJO35_14400 IPR004610 Bacterial RecJ exonuclease CJO35_14400 IPR003156 DHHA1 domain CJO35_14400 IPR038763 DHH phosphoesterase superfamily CJO35_14405 IPR010445 Lipopolysaccharide assembly protein A domain CJO35_14410 IPR005791 Protein translocase subunit SecD CJO35_14410 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJO35_14410 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CJO35_14410 IPR005665 Protein-export membrane protein SecF, bacterial CJO35_14410 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CJO35_14415 IPR025716 Post-transcriptional regulator CJO35_14420 IPR014249 Sporulation stage V protein B CJO35_14420 IPR002797 Polysaccharide biosynthesis protein CJO35_14420 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CJO35_14420 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CJO35_14425 IPR007353 Protein of unknown function DUF421 CJO35_14425 IPR023090 UPF0702, alpha/beta domain superfamily CJO35_14430 IPR023804 Protein of unknown function DUF3792, transmembrane CJO35_14435 IPR003849 Preprotein translocase YajC CJO35_14440 IPR004803 tRNA-guanine transglycosylase CJO35_14440 IPR036511 Queuine tRNA-ribosyltransferase-like CJO35_14440 IPR002616 tRNA-guanine(15) transglycosylase-like CJO35_14445 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CJO35_14445 IPR042118 QueA, domain 1 CJO35_14445 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CJO35_14445 IPR042119 QueA, domain 2 CJO35_14450 IPR021320 Protein of unknown function DUF2905 CJO35_14455 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14455 IPR008824 RuvB-like P-loop domain CJO35_14455 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14455 IPR004605 DNA helicase, Holliday junction RuvB-type CJO35_14455 IPR041445 RuvB, AAA lid domain CJO35_14455 IPR003593 AAA+ ATPase domain CJO35_14455 IPR008823 RuvB C-terminal winged helix domain CJO35_14460 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CJO35_14460 IPR000085 Bacterial DNA recombination protein RuvA CJO35_14460 IPR012340 Nucleic acid-binding, OB-fold CJO35_14460 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CJO35_14460 IPR010994 RuvA domain 2-like CJO35_14460 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CJO35_14460 IPR036267 RuvA, C-terminal domain superfamily CJO35_14465 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily CJO35_14465 IPR015071 Bypass-of-forespore C, N-terminal CJO35_14465 IPR038117 Bypass of forespore C, C-terminal domain superfamily CJO35_14465 IPR015050 Bypass of forespore C, C-terminal CJO35_14470 IPR017441 Protein kinase, ATP binding site CJO35_14470 IPR011009 Protein kinase-like domain superfamily CJO35_14475 IPR012610 Small acid-soluble spore protein, SspH CJO35_14480 IPR034660 DinB/YfiT-like putative metalloenzymes CJO35_14480 IPR007837 DNA damage-inducible protein DinB CJO35_14485 IPR038128 Poly-gamma-glutamate hydrolase superfamily CJO35_14485 IPR008585 Poly-gamma-glutamate hydrolase CJO35_14500 IPR002876 Transcriptional regulator TACO1-like CJO35_14500 IPR017856 Integrase-like, N-terminal CJO35_14500 IPR029072 YebC-like CJO35_14500 IPR026564 Transcriptional regulator TACO1-like, domain 3 CJO35_14505 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like CJO35_14510 IPR014248 Spore coat assembly protein SafA CJO35_14510 IPR036779 LysM domain superfamily CJO35_14510 IPR018392 LysM domain CJO35_14515 IPR003473 Quinolinate synthetase A CJO35_14515 IPR036094 Quinolinate synthetase A superfamily CJO35_14515 IPR023515 Quinolinate synthase A, type 3 CJO35_14520 IPR004393 Nicotinate-nucleotide pyrophosphorylase CJO35_14520 IPR013785 Aldolase-type TIM barrel CJO35_14520 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CJO35_14520 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CJO35_14520 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CJO35_14520 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CJO35_14520 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CJO35_14525 IPR005288 L-aspartate oxidase CJO35_14525 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CJO35_14525 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CJO35_14525 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_14525 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CJO35_14525 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CJO35_14530 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_14530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_14530 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJO35_14530 IPR000192 Aminotransferase class V domain CJO35_14530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_14530 IPR016454 Cysteine desulfurase CJO35_14535 IPR035922 3H domain superfamily CJO35_14535 IPR004173 3H domain CJO35_14535 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14535 IPR013196 Helix-turn-helix, type 11 CJO35_14535 IPR026043 Transcription repressor NadR CJO35_14535 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14540 IPR018528 Prephenate dehydratase, conserved site CJO35_14540 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CJO35_14540 IPR001086 Prephenate dehydratase CJO35_14540 IPR002912 ACT domain CJO35_14545 IPR008310 UPF0735 ACT domain-containing protein CJO35_14545 IPR002912 ACT domain CJO35_14550 IPR006169 GTP1/OBG domain CJO35_14550 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily CJO35_14550 IPR006074 GTP1/OBG, conserved site CJO35_14550 IPR014100 GTP-binding protein Obg/CgtA CJO35_14550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14550 IPR036726 GTP1/OBG domain superfamily CJO35_14550 IPR006073 GTP binding domain CJO35_14550 IPR031167 OBG-type guanine nucleotide-binding (G) domain CJO35_14550 IPR035101 GTP-binding protein, Obg-type CJO35_14550 IPR005225 Small GTP-binding protein domain CJO35_14550 IPR015349 GTP-binding protein OBG, C-terminal CJO35_14555 IPR039506 SpoOB, alpha-helical domain CJO35_14555 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily CJO35_14555 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CJO35_14555 IPR016122 Sporulation initiation phosphotransferase B, C-terminal CJO35_14560 IPR018261 Ribosomal protein L27, conserved site CJO35_14560 IPR001684 Ribosomal protein L27 CJO35_14565 IPR036764 Cysteine protease Prp superfamily CJO35_14565 IPR007422 Cysteine protease Prp CJO35_14570 IPR001787 Ribosomal protein L21 CJO35_14570 IPR018258 Ribosomal protein L21, conserved site CJO35_14570 IPR036164 L21-like superfamily CJO35_14570 IPR028909 Ribosomal protein L21-like CJO35_14575 IPR008915 Peptidase M50 CJO35_14580 IPR016047 Peptidase M23 CJO35_14580 IPR011055 Duplicated hybrid motif CJO35_14585 IPR013538 Activator of Hsp90 ATPase homologue 1-like CJO35_14585 IPR023393 START-like domain superfamily CJO35_14590 IPR001845 HTH ArsR-type DNA-binding domain CJO35_14590 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14590 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14590 IPR011991 ArsR-like helix-turn-helix domain CJO35_14595 IPR025501 ATP binding protein MinD CJO35_14595 IPR010223 ATP binding protein MinD, bacterial-type CJO35_14595 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CJO35_14595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14600 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CJO35_14600 IPR013033 Septum formation inhibitor MinC CJO35_14600 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily CJO35_14600 IPR005526 Septum formation inhibitor MinC, C-terminal CJO35_14605 IPR007227 Cell shape-determining protein MreD CJO35_14610 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CJO35_14610 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CJO35_14610 IPR007221 Rod shape-determining protein MreC CJO35_14615 IPR004753 Cell shape determining protein MreB CJO35_14625 IPR029001 Inosine triphosphate pyrophosphatase-like CJO35_14625 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CJO35_14630 IPR007730 Sporulation-like domain CJO35_14630 IPR036680 Sporulation-like domain superfamily CJO35_14635 IPR000045 Prepilin type IV endopeptidase, peptidase domain CJO35_14635 IPR010627 Peptidase A24A, N-terminal CJO35_14640 IPR036615 Mur ligase, C-terminal domain superfamily CJO35_14640 IPR004101 Mur ligase, C-terminal CJO35_14640 IPR036565 Mur-like, catalytic domain superfamily CJO35_14640 IPR001645 Folylpolyglutamate synthetase CJO35_14640 IPR013221 Mur ligase, central CJO35_14640 IPR018109 Folylpolyglutamate synthetase, conserved site CJO35_14645 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_14645 IPR002300 Aminoacyl-tRNA synthetase, class Ia CJO35_14645 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CJO35_14645 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CJO35_14645 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CJO35_14645 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CJO35_14645 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CJO35_14645 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CJO35_14645 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CJO35_14645 IPR002303 Valine-tRNA ligase CJO35_14645 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_14655 IPR011009 Protein kinase-like domain superfamily CJO35_14655 IPR014253 Spore coat protein YsxE CJO35_14660 IPR018392 LysM domain CJO35_14660 IPR036779 LysM domain superfamily CJO35_14665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_14665 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_14665 IPR005814 Aminotransferase class-III CJO35_14665 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CJO35_14665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_14670 IPR001731 Delta-aminolevulinic acid dehydratase CJO35_14670 IPR013785 Aldolase-type TIM barrel CJO35_14670 IPR030656 Delta-aminolevulinic acid dehydratase, active site CJO35_14675 IPR039793 Uroporphyrinogen-III synthase CJO35_14675 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CJO35_14675 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily CJO35_14680 IPR000860 Porphobilinogen deaminase CJO35_14680 IPR022418 Porphobilinogen deaminase, C-terminal CJO35_14680 IPR022417 Porphobilinogen deaminase, N-terminal CJO35_14680 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CJO35_14680 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CJO35_14685 IPR002541 Cytochrome c assembly protein CJO35_14690 IPR036291 NAD(P)-binding domain superfamily CJO35_14690 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CJO35_14690 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CJO35_14690 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CJO35_14690 IPR018214 Glutamyl-tRNA reductase, conserved site CJO35_14690 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CJO35_14690 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CJO35_14690 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CJO35_14700 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CJO35_14700 IPR006073 GTP binding domain CJO35_14700 IPR030393 EngB-type guanine nucleotide-binding (G) domain CJO35_14700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14705 IPR003111 Lon, substrate-binding domain CJO35_14705 IPR027065 Lon protease CJO35_14705 IPR015947 PUA-like superfamily CJO35_14705 IPR008268 Peptidase S16, active site CJO35_14705 IPR004815 Lon protease, bacterial/eukaryotic-type CJO35_14705 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_14705 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_14705 IPR027543 Lon protease, bacterial CJO35_14705 IPR003959 ATPase, AAA-type, core CJO35_14705 IPR003593 AAA+ ATPase domain CJO35_14705 IPR008269 Peptidase S16, Lon proteolytic domain CJO35_14710 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_14710 IPR008268 Peptidase S16, active site CJO35_14710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14710 IPR027065 Lon protease CJO35_14710 IPR008269 Peptidase S16, Lon proteolytic domain CJO35_14710 IPR003959 ATPase, AAA-type, core CJO35_14710 IPR003593 AAA+ ATPase domain CJO35_14710 IPR014251 Sporulation protease LonB CJO35_14710 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_14715 IPR003593 AAA+ ATPase domain CJO35_14715 IPR019489 Clp ATPase, C-terminal CJO35_14715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14715 IPR004487 Clp protease, ATP-binding subunit ClpX CJO35_14715 IPR003959 ATPase, AAA-type, core CJO35_14715 IPR010603 Zinc finger, ClpX C4-type CJO35_14715 IPR038366 Zinc finger, ClpX C4-type superfamily CJO35_14720 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CJO35_14720 IPR005215 Trigger factor CJO35_14720 IPR008880 Trigger factor, C-terminal CJO35_14720 IPR037041 Trigger factor, C-terminal domain superfamily CJO35_14720 IPR008881 Trigger factor, ribosome-binding, bacterial CJO35_14720 IPR036611 Trigger factor ribosome-binding domain superfamily CJO35_14720 IPR027304 Trigger factor/SurA domain superfamily CJO35_14725 IPR019734 Tetratricopeptide repeat CJO35_14725 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_14725 IPR013026 Tetratricopeptide repeat-containing domain CJO35_14730 IPR004431 3-isopropylmalate dehydratase, small subunit CJO35_14730 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJO35_14730 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CJO35_14730 IPR033940 3-isopropylmalate dehydratase, swivel domain CJO35_14735 IPR036008 Aconitase, iron-sulfur domain CJO35_14735 IPR004430 3-isopropylmalate dehydratase, large subunit CJO35_14735 IPR018136 Aconitase family, 4Fe-4S cluster binding site CJO35_14735 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CJO35_14735 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CJO35_14735 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CJO35_14740 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CJO35_14740 IPR024084 Isopropylmalate dehydrogenase-like domain CJO35_14740 IPR004429 Isopropylmalate dehydrogenase CJO35_14745 IPR005671 2-isopropylmalate synthase, bacterial-type CJO35_14745 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CJO35_14745 IPR013785 Aldolase-type TIM barrel CJO35_14745 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CJO35_14745 IPR000891 Pyruvate carboxyltransferase CJO35_14745 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CJO35_14750 IPR000506 Ketol-acid reductoisomerase, C-terminal CJO35_14750 IPR013116 Ketol-acid reductoisomerase, N-terminal CJO35_14750 IPR013023 Ketol-acid reductoisomerase CJO35_14750 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_14750 IPR036291 NAD(P)-binding domain superfamily CJO35_14750 IPR014359 Ketol-acid reductoisomerase, prokaryotic CJO35_14755 IPR002912 ACT domain CJO35_14755 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CJO35_14755 IPR039557 AHAS, ACT domain CJO35_14755 IPR019455 Acetolactate synthase, small subunit, C-terminal CJO35_14755 IPR004789 Acetolactate synthase, small subunit CJO35_14760 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CJO35_14760 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CJO35_14760 IPR039368 Acetolactate synthase large subunit, TPP binding domain CJO35_14760 IPR029035 DHS-like NAD/FAD-binding domain superfamily CJO35_14760 IPR012846 Acetolactate synthase, large subunit, biosynthetic CJO35_14760 IPR029061 Thiamin diphosphate-binding fold CJO35_14760 IPR012000 Thiamine pyrophosphate enzyme, central domain CJO35_14765 IPR018300 Aminotransferase, class IV, conserved site CJO35_14765 IPR036038 Aminotransferase-like, PLP-dependent enzymes CJO35_14765 IPR005785 Branched-chain amino acid aminotransferase I CJO35_14765 IPR033939 Branched-chain aminotransferase CJO35_14765 IPR001544 Aminotransferase class IV CJO35_14775 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CJO35_14775 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CJO35_14775 IPR036291 NAD(P)-binding domain superfamily CJO35_14775 IPR033524 Leu/Phe/Val dehydrogenases active site CJO35_14775 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CJO35_14775 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CJO35_14775 IPR014362 Glutamate dehydrogenase CJO35_14795 IPR016753 Phage portal protein PBSX family, Firmicutes CJO35_14795 IPR006944 Bacteriophage/Gene transfer agent portal protein CJO35_14795 IPR006430 Phage portal protein PBSX family CJO35_14830 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_14830 IPR001525 C-5 cytosine methyltransferase CJO35_14830 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_14830 IPR018117 DNA methylase, C-5 cytosine-specific, active site CJO35_14830 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site CJO35_14830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_14845 IPR036170 Probable antitoxin YezG superfamily CJO35_14845 IPR006728 Protein of unknown function DUF600 CJO35_14850 IPR006829 LXG domain CJO35_14855 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_14855 IPR013026 Tetratricopeptide repeat-containing domain CJO35_14855 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_14855 IPR019734 Tetratricopeptide repeat CJO35_14875 IPR000979 Phosphodiesterase MJ0936/Vps29 CJO35_14875 IPR041802 YfcE-like, metallophosphatase domain CJO35_14875 IPR029052 Metallo-dependent phosphatase-like CJO35_14875 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type CJO35_14875 IPR020935 Phosphodiesterase YfcE, conserved site CJO35_14880 IPR020922 dITP/XTP pyrophosphatase CJO35_14880 IPR029001 Inosine triphosphate pyrophosphatase-like CJO35_14880 IPR002637 Ham1-like protein CJO35_14885 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_14885 IPR018336 Ribonuclease PH, conserved site CJO35_14885 IPR015847 Exoribonuclease, phosphorolytic domain 2 CJO35_14885 IPR036345 Exoribonuclease, PH domain 2 superfamily CJO35_14885 IPR027408 PNPase/RNase PH domain superfamily CJO35_14885 IPR002381 Ribonuclease PH, bacterial-type CJO35_14885 IPR001247 Exoribonuclease, phosphorolytic domain 1 CJO35_14890 IPR019606 GerMN domain CJO35_14895 IPR018187 Asp/Glu racemase, active site 1 CJO35_14895 IPR033134 Asp/Glu racemase, active site 2 CJO35_14895 IPR004391 Glutamate racemase CJO35_14895 IPR015942 Asp/Glu/hydantoin racemase CJO35_14895 IPR001920 Asp/Glu racemase CJO35_14900 IPR000835 MarR-type HTH domain CJO35_14900 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14900 IPR036390 Winged helix DNA-binding domain superfamily CJO35_14905 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_14905 IPR000792 Transcription regulator LuxR, C-terminal CJO35_14905 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_14910 IPR036291 NAD(P)-binding domain superfamily CJO35_14910 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_14915 IPR029069 HotDog domain superfamily CJO35_14915 IPR006683 Thioesterase domain CJO35_14920 IPR009051 Alpha-helical ferredoxin CJO35_14920 IPR036010 2Fe-2S ferredoxin-like superfamily CJO35_14920 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_14920 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJO35_14920 IPR012675 Beta-grasp domain superfamily CJO35_14920 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CJO35_14920 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CJO35_14925 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CJO35_14925 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CJO35_14925 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_14925 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CJO35_14925 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CJO35_14925 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CJO35_14925 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria CJO35_14930 IPR011138 Succinate dehydrogenase cytochrome b558 subunit CJO35_14930 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute CJO35_14930 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CJO35_14930 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CJO35_14935 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily CJO35_14935 IPR019642 Protein of unknown function DUF2507 CJO35_14940 IPR001341 Aspartate kinase CJO35_14940 IPR027795 CASTOR, ACT domain CJO35_14940 IPR018042 Aspartate kinase, conserved site CJO35_14940 IPR005260 Aspartate kinase, monofunctional class CJO35_14940 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_14940 IPR041740 Aspartokinase catalytic domain CJO35_14940 IPR002912 ACT domain CJO35_14940 IPR036393 Acetylglutamate kinase-like superfamily CJO35_14945 IPR035901 GIY-YIG endonuclease superfamily CJO35_14945 IPR010994 RuvA domain 2-like CJO35_14945 IPR036876 UVR domain superfamily CJO35_14945 IPR001943 UVR domain CJO35_14945 IPR000305 GIY-YIG endonuclease CJO35_14945 IPR038476 UvrC homology region 2 superfamily CJO35_14945 IPR001162 UvrC family homology region CJO35_14945 IPR004791 UvrABC system, subunit C CJO35_14950 IPR036249 Thioredoxin-like superfamily CJO35_14950 IPR017937 Thioredoxin, conserved site CJO35_14950 IPR005746 Thioredoxin CJO35_14950 IPR013766 Thioredoxin domain CJO35_14955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_14955 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site CJO35_14955 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CJO35_14955 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal CJO35_14955 IPR001308 Electron transfer flavoprotein alpha subunit/FixB CJO35_14955 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CJO35_14955 IPR029035 DHS-like NAD/FAD-binding domain superfamily CJO35_14960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_14960 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal CJO35_14960 IPR012255 Electron transfer flavoprotein, beta subunit CJO35_14960 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CJO35_14960 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CJO35_14965 IPR001753 Enoyl-CoA hydratase/isomerase CJO35_14965 IPR029045 ClpP/crotonase-like domain superfamily CJO35_14965 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CJO35_14970 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_14970 IPR009057 Homeobox-like domain superfamily CJO35_14970 IPR013570 Transcription regulator YsiA, C-terminal CJO35_14970 IPR001647 DNA-binding HTH domain, TetR-type CJO35_14975 IPR042099 AMP-dependent synthetase-like superfamily CJO35_14975 IPR000873 AMP-dependent synthetase/ligase CJO35_14975 IPR020845 AMP-binding, conserved site CJO35_14975 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_14980 IPR007140 Protein of unknown function DUF350 CJO35_14985 IPR007696 DNA mismatch repair protein MutS, core CJO35_14985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_14985 IPR002625 Smr domain CJO35_14985 IPR036063 Smr domain superfamily CJO35_14985 IPR000432 DNA mismatch repair protein MutS, C-terminal CJO35_14985 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CJO35_14985 IPR005747 Endonuclease MutS2 CJO35_14990 IPR010996 DNA polymerase beta-like, N-terminal domain CJO35_14990 IPR027421 DNA polymerase lambda lyase domain superfamily CJO35_14990 IPR037160 DNA polymerase, thumb domain superfamily CJO35_14990 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CJO35_14990 IPR002054 DNA-directed DNA polymerase X CJO35_14990 IPR004013 PHP domain CJO35_14990 IPR003141 Polymerase/histidinol phosphatase, N-terminal CJO35_14990 IPR016195 Polymerase/histidinol phosphatase-like CJO35_14990 IPR029398 DNA polymerase beta, thumb domain CJO35_14990 IPR022311 Uncharacterised conserved protein UCP005047, YshC CJO35_14995 IPR003825 Colicin V production, CvpA CJO35_15000 IPR023688 Cell division protein ZapA, firmicutes CJO35_15000 IPR036192 Cell division protein ZapA-like superfamily CJO35_15000 IPR007838 Cell division protein ZapA-like CJO35_15005 IPR001352 Ribonuclease HII/HIII CJO35_15005 IPR024567 Ribonuclease HII/HIII domain CJO35_15005 IPR024568 Ribonuclease HIII, N-terminal CJO35_15005 IPR012337 Ribonuclease H-like superfamily CJO35_15005 IPR036397 Ribonuclease H superfamily CJO35_15005 IPR012295 TBP domain superfamily CJO35_15005 IPR004641 Ribonuclease HIII CJO35_15030 IPR003593 AAA+ ATPase domain CJO35_15030 IPR003439 ABC transporter-like CJO35_15030 IPR017871 ABC transporter, conserved site CJO35_15030 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CJO35_15030 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CJO35_15030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_15045 IPR012340 Nucleic acid-binding, OB-fold CJO35_15045 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CJO35_15045 IPR002547 tRNA-binding domain CJO35_15045 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CJO35_15045 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CJO35_15045 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CJO35_15045 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CJO35_15045 IPR005121 Ferrodoxin-fold anticodon-binding domain CJO35_15045 IPR009061 Putative DNA-binding domain superfamily CJO35_15045 IPR005146 B3/B4 tRNA-binding domain CJO35_15045 IPR005147 tRNA synthetase, B5-domain CJO35_15050 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CJO35_15050 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_15050 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CJO35_15050 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CJO35_15050 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CJO35_15050 IPR002319 Phenylalanyl-tRNA synthetase CJO35_15055 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJO35_15055 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CJO35_15055 IPR001537 tRNA/rRNA methyltransferase, SpoU type CJO35_15055 IPR029064 50S ribosomal protein L30e-like CJO35_15055 IPR029028 Alpha/beta knot methyltransferases CJO35_15060 IPR017525 Small, acid-soluble spore protein I CJO35_15065 IPR003706 CstA, N-terminal domain CJO35_15065 IPR025299 CstA, C-terminal domain CJO35_15075 IPR017853 Glycoside hydrolase superfamily CJO35_15075 IPR010720 Alpha-L-arabinofuranosidase, C-terminal CJO35_15075 IPR013780 Glycosyl hydrolase, all-beta CJO35_15080 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_15080 IPR035906 MetI-like superfamily CJO35_15085 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_15085 IPR035906 MetI-like superfamily CJO35_15090 IPR006059 Bacterial extracellular solute-binding protein CJO35_15095 IPR023003 Glycerol-1-phosphate dehydrogenase, bacteria CJO35_15095 IPR032837 Glycerol-1-phosphate dehydrogenase CJO35_15100 IPR004661 L-ribulose-5-phosphate 4-epimerase CJO35_15100 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CJO35_15100 IPR001303 Class II aldolase/adducin N-terminal CJO35_15105 IPR018484 Carbohydrate kinase, FGGY, N-terminal CJO35_15105 IPR005929 Ribulokinase CJO35_15105 IPR018483 Carbohydrate kinase, FGGY, conserved site CJO35_15105 IPR018485 Carbohydrate kinase, FGGY, C-terminal CJO35_15105 IPR000577 Carbohydrate kinase, FGGY CJO35_15110 IPR003762 L-arabinose isomerase CJO35_15110 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CJO35_15110 IPR024664 L-arabinose isomerase, C-terminal CJO35_15110 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily CJO35_15110 IPR038583 L-arabinose isomerase, N-terminal domain superfamily CJO35_15115 IPR006710 Glycoside hydrolase, family 43 CJO35_15115 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase CJO35_15115 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_15120 IPR008007 Peptidase M42 CJO35_15120 IPR023367 Peptidase M42, domain 2 CJO35_15130 IPR010718 Protein of unknown function DUF1294 CJO35_15135 IPR005813 Ribosomal protein L20 CJO35_15135 IPR035566 Ribosomal protein L20, C-terminal CJO35_15140 IPR021137 Ribosomal protein L35 CJO35_15140 IPR018265 Ribosomal protein L35, conserved site CJO35_15140 IPR001706 Ribosomal protein L35, non-mitochondrial CJO35_15140 IPR037229 Ribosomal protein L35 superfamily CJO35_15145 IPR019815 Translation initiation factor 3, C-terminal CJO35_15145 IPR019814 Translation initiation factor 3, N-terminal CJO35_15145 IPR019813 Translation initiation factor 3, conserved site CJO35_15145 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CJO35_15145 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CJO35_15145 IPR001288 Translation initiation factor 3 CJO35_15150 IPR024891 Antiholin-like protein LrgB CJO35_15150 IPR007300 CidB/LrgB family CJO35_15155 IPR005538 LrgA/CidA family CJO35_15155 IPR023736 Antiholin-like protein LrgA CJO35_15160 IPR032093 Phospholipase D, N-terminal CJO35_15160 IPR018946 Alkaline phosphatase D-related CJO35_15160 IPR038607 PhoD-like superfamily CJO35_15160 IPR008963 Purple acid phosphatase-like, N-terminal CJO35_15165 IPR011006 CheY-like superfamily CJO35_15165 IPR007492 LytTR DNA-binding domain CJO35_15165 IPR001789 Signal transduction response regulator, receiver domain CJO35_15170 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CJO35_15170 IPR010559 Signal transduction histidine kinase, internal region CJO35_15170 IPR005467 Histidine kinase domain CJO35_15170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_15170 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_15170 IPR029016 GAF-like domain superfamily CJO35_15170 IPR003018 GAF domain CJO35_15185 IPR004154 Anticodon-binding CJO35_15185 IPR012676 TGS-like CJO35_15185 IPR002320 Threonine-tRNA ligase, class IIa CJO35_15185 IPR012675 Beta-grasp domain superfamily CJO35_15185 IPR036621 Anticodon-binding domain superfamily CJO35_15185 IPR033728 Threonine-tRNA ligase catalytic core domain CJO35_15185 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CJO35_15185 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CJO35_15185 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CJO35_15185 IPR004095 TGS CJO35_15185 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_15190 IPR014199 Sporulation protein YtxC CJO35_15195 IPR015414 Transmembrane protein TMEM64 CJO35_15195 IPR032816 SNARE associated Golgi protein CJO35_15200 IPR009928 Primosomal DnaI, N-terminal CJO35_15200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_15200 IPR002611 IstB-like ATP-binding protein CJO35_15200 IPR003593 AAA+ ATPase domain CJO35_15205 IPR006343 DnaD domain CJO35_15210 IPR003796 Ribonucleotide reductase regulator NrdR-like CJO35_15210 IPR005144 ATP-cone domain CJO35_15225 IPR016067 S-adenosylmethionine decarboxylase, core CJO35_15225 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CJO35_15225 IPR017716 S-adenosylmethionine decarboxylase proenzyme CJO35_15230 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CJO35_15230 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CJO35_15230 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CJO35_15230 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CJO35_15230 IPR036291 NAD(P)-binding domain superfamily CJO35_15230 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CJO35_15235 IPR002022 Pectate lyase CJO35_15235 IPR012334 Pectin lyase fold CJO35_15235 IPR011050 Pectin lyase fold/virulence factor CJO35_15240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_15240 IPR001977 Dephospho-CoA kinase CJO35_15245 IPR014205 Sporulation protein YtaF CJO35_15245 IPR003810 Putative manganese efflux pump CJO35_15250 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CJO35_15250 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CJO35_15250 IPR020629 Formamidopyrimidine-DNA glycosylase CJO35_15250 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CJO35_15250 IPR035937 MutM-like, N-terminal CJO35_15250 IPR010979 Ribosomal protein S13-like, H2TH CJO35_15250 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CJO35_15250 IPR010663 Zinc finger, FPG/IleRS-type CJO35_15255 IPR019760 DNA-directed DNA polymerase, family A, conserved site CJO35_15255 IPR002298 DNA polymerase A CJO35_15255 IPR018320 DNA polymerase 1 CJO35_15255 IPR020045 DNA polymerase I-like, H3TH domain CJO35_15255 IPR008918 Helix-hairpin-helix motif, class 2 CJO35_15255 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CJO35_15255 IPR002562 3'-5' exonuclease domain CJO35_15255 IPR002421 5'-3' exonuclease, N-terminal CJO35_15255 IPR029060 PIN-like domain superfamily CJO35_15255 IPR036397 Ribonuclease H superfamily CJO35_15255 IPR012337 Ribonuclease H-like superfamily CJO35_15255 IPR001098 DNA-directed DNA polymerase, family A, palm domain CJO35_15255 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CJO35_15260 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_15260 IPR031967 PhoR, single Cache-like domain CJO35_15260 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_15260 IPR013767 PAS fold CJO35_15260 IPR035965 PAS domain superfamily CJO35_15260 IPR000014 PAS domain CJO35_15260 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_15260 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_15260 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_15260 IPR005467 Histidine kinase domain CJO35_15265 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_15265 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_15265 IPR001789 Signal transduction response regulator, receiver domain CJO35_15265 IPR011006 CheY-like superfamily CJO35_15265 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15265 IPR039420 Transcriptional regulatory protein WalR-like CJO35_15270 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CJO35_15270 IPR001236 Lactate/malate dehydrogenase, N-terminal CJO35_15270 IPR001557 L-lactate/malate dehydrogenase CJO35_15270 IPR011275 Malate dehydrogenase, type 3 CJO35_15270 IPR036291 NAD(P)-binding domain superfamily CJO35_15270 IPR022383 Lactate/malate dehydrogenase, C-terminal CJO35_15275 IPR024084 Isopropylmalate dehydrogenase-like domain CJO35_15275 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CJO35_15275 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CJO35_15280 IPR002020 Citrate synthase CJO35_15280 IPR036969 Citrate synthase superfamily CJO35_15280 IPR024176 Citrate synthase, bacterial-type CJO35_15280 IPR011278 2-methylcitrate synthase/citrate synthase type I CJO35_15280 IPR016142 Citrate synthase-like, large alpha subdomain CJO35_15280 IPR016143 Citrate synthase-like, small alpha subdomain CJO35_15280 IPR019810 Citrate synthase active site CJO35_15285 IPR007382 Uncharacterised protein family UPF0756, transmembrame CJO35_15290 IPR002549 Transmembrane protein TqsA-like CJO35_15290 IPR014227 Putative transport protein YtvI-like CJO35_15295 IPR007313 FxsA cytoplasmic membrane protein CJO35_15300 IPR015806 Pyruvate kinase, insert domain superfamily CJO35_15300 IPR015795 Pyruvate kinase, C-terminal CJO35_15300 IPR018209 Pyruvate kinase, active site CJO35_15300 IPR011037 Pyruvate kinase-like, insert domain superfamily CJO35_15300 IPR040442 Pyruvate kinase-like domain superfamily CJO35_15300 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CJO35_15300 IPR001697 Pyruvate kinase CJO35_15300 IPR036637 Phosphohistidine domain superfamily CJO35_15300 IPR008279 PEP-utilising enzyme, mobile domain CJO35_15300 IPR036918 Pyruvate kinase, C-terminal domain superfamily CJO35_15300 IPR015793 Pyruvate kinase, barrel CJO35_15305 IPR035966 Phosphofructokinase superfamily CJO35_15305 IPR022953 ATP-dependent 6-phosphofructokinase CJO35_15305 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type CJO35_15305 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic CJO35_15305 IPR015912 Phosphofructokinase, conserved site CJO35_15305 IPR000023 Phosphofructokinase domain CJO35_15310 IPR001095 Acetyl-CoA carboxylase, alpha subunit CJO35_15310 IPR029045 ClpP/crotonase-like domain superfamily CJO35_15310 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CJO35_15315 IPR034733 Acetyl-CoA carboxylase CJO35_15315 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CJO35_15315 IPR041010 Acetyl-coA carboxylase zinc finger domain CJO35_15315 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CJO35_15315 IPR029045 ClpP/crotonase-like domain superfamily CJO35_15320 IPR012301 Malic enzyme, N-terminal domain CJO35_15320 IPR037062 Malic enzyme, N-terminal domain superfamily CJO35_15320 IPR012302 Malic enzyme, NAD-binding CJO35_15320 IPR015884 Malic enzyme, conserved site CJO35_15320 IPR001891 Malic oxidoreductase CJO35_15320 IPR036291 NAD(P)-binding domain superfamily CJO35_15325 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CJO35_15325 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CJO35_15325 IPR040982 DNA polymerase III alpha subunit finger domain CJO35_15325 IPR029460 DNA polymerase, helix-hairpin-helix motif CJO35_15325 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CJO35_15325 IPR004013 PHP domain CJO35_15325 IPR003141 Polymerase/histidinol phosphatase, N-terminal CJO35_15325 IPR004805 DNA polymerase III, alpha subunit CJO35_15325 IPR016195 Polymerase/histidinol phosphatase-like CJO35_15330 IPR025689 Sporulation protein YtrH CJO35_15345 IPR003156 DHHA1 domain CJO35_15345 IPR038763 DHH phosphoesterase superfamily CJO35_15345 IPR001667 DDH domain CJO35_15350 IPR025618 YtpI-like protein CJO35_15355 IPR036390 Winged helix DNA-binding domain superfamily CJO35_15355 IPR000644 CBS domain CJO35_15355 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CJO35_15355 IPR006683 Thioesterase domain CJO35_15355 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15355 IPR000524 Transcription regulator HTH, GntR CJO35_15355 IPR010766 DRTGG CJO35_15355 IPR029069 HotDog domain superfamily CJO35_15360 IPR005149 Transcription regulator PadR, N-terminal CJO35_15360 IPR018309 Transcription regulator PadR, C-terminal CJO35_15360 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15360 IPR036390 Winged helix DNA-binding domain superfamily CJO35_15365 IPR022877 Protein of unknown funcion UPF0173 CJO35_15365 IPR001279 Metallo-beta-lactamase CJO35_15365 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_15370 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_15370 IPR036291 NAD(P)-binding domain superfamily CJO35_15375 IPR024083 Fumarase/histidase, N-terminal CJO35_15375 IPR009049 Argininosuccinate lyase CJO35_15375 IPR000362 Fumarate lyase family CJO35_15375 IPR029419 Argininosuccinate lyase, C-terminal CJO35_15375 IPR022761 Fumarate lyase, N-terminal CJO35_15375 IPR008948 L-Aspartase-like CJO35_15375 IPR020557 Fumarate lyase, conserved site CJO35_15380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_15380 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CJO35_15380 IPR023434 Argininosuccinate synthase, type 1 subfamily CJO35_15380 IPR018223 Argininosuccinate synthase, conserved site CJO35_15380 IPR001518 Argininosuccinate synthase CJO35_15385 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CJO35_15385 IPR001453 MoaB/Mog domain CJO35_15385 IPR008284 Molybdenum cofactor biosynthesis, conserved site CJO35_15385 IPR036425 MoaB/Mog-like domain superfamily CJO35_15390 IPR004372 Acetate/propionate kinase CJO35_15390 IPR000890 Aliphatic acid kinase, short-chain CJO35_15390 IPR023865 Aliphatic acid kinase, short-chain, conserved site CJO35_15395 IPR003356 DNA methylase, adenine-specific CJO35_15395 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted CJO35_15395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_15400 IPR018219 Thiol peroxidase conserved site CJO35_15400 IPR002065 Thiol peroxidase Tpx CJO35_15400 IPR013740 Redoxin CJO35_15400 IPR036249 Thioredoxin-like superfamily CJO35_15400 IPR013766 Thioredoxin domain CJO35_15405 IPR014229 Sporulation protein YtfJ CJO35_15410 IPR021338 Protein of unknown function DUF2953 CJO35_15415 IPR010432 RDD CJO35_15420 IPR029045 ClpP/crotonase-like domain superfamily CJO35_15420 IPR004635 Peptidase S49, SppA CJO35_15420 IPR002142 Peptidase S49 CJO35_15425 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CJO35_15425 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CJO35_15425 IPR002504 NAD kinase CJO35_15425 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CJO35_15430 IPR011053 Single hybrid motif CJO35_15435 IPR036259 MFS transporter superfamily CJO35_15435 IPR011701 Major facilitator superfamily CJO35_15435 IPR020846 Major facilitator superfamily domain CJO35_15445 IPR042099 AMP-dependent synthetase-like superfamily CJO35_15445 IPR020845 AMP-binding, conserved site CJO35_15445 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_15445 IPR000873 AMP-dependent synthetase/ligase CJO35_15450 IPR001448 Small acid-soluble spore protein, alpha/beta-type CJO35_15450 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CJO35_15450 IPR038300 SASP, alpha/beta-type superfamily CJO35_15455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_15455 IPR020536 Thil, AANH domain CJO35_15455 IPR004114 THUMP domain CJO35_15455 IPR003720 tRNA sulfurtransferase ThiI CJO35_15460 IPR016454 Cysteine desulfurase CJO35_15460 IPR000192 Aminotransferase class V domain CJO35_15460 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_15460 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_15460 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_15465 IPR004685 Branched-chain amino acid transport system II carrier protein CJO35_15470 IPR010379 Septation ring formation regulator EzrA CJO35_15475 IPR010140 Histidinol phosphate phosphatase, HisJ CJO35_15475 IPR004013 PHP domain CJO35_15475 IPR016195 Polymerase/histidinol phosphatase-like CJO35_15480 IPR001647 DNA-binding HTH domain, TetR-type CJO35_15480 IPR009057 Homeobox-like domain superfamily CJO35_15480 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_15485 IPR000614 Free Met sulfoxide reductase conserved site CJO35_15485 IPR029016 GAF-like domain superfamily CJO35_15485 IPR003018 GAF domain CJO35_15500 IPR005709 Ribosomal protein S4, bacterial-type CJO35_15500 IPR022801 Ribosomal protein S4/S9 CJO35_15500 IPR018079 Ribosomal protein S4, conserved site CJO35_15500 IPR002942 RNA-binding S4 domain CJO35_15500 IPR036986 RNA-binding S4 domain superfamily CJO35_15500 IPR001912 Ribosomal protein S4/S9, N-terminal CJO35_15515 IPR008523 Protein of unknown function DUF805 CJO35_15520 IPR001279 Metallo-beta-lactamase CJO35_15520 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_15525 IPR011008 Dimeric alpha-beta barrel CJO35_15525 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJO35_15525 IPR000485 AsnC-type HTH domain CJO35_15525 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15525 IPR036390 Winged helix DNA-binding domain superfamily CJO35_15525 IPR019888 Transcription regulator AsnC-type CJO35_15530 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_15530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_15530 IPR002942 RNA-binding S4 domain CJO35_15530 IPR036986 RNA-binding S4 domain superfamily CJO35_15530 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CJO35_15530 IPR024088 Tyrosine-tRNA ligase, bacterial-type CJO35_15530 IPR002305 Aminoacyl-tRNA synthetase, class Ic CJO35_15530 IPR002307 Tyrosine-tRNA ligase CJO35_15535 IPR042099 AMP-dependent synthetase-like superfamily CJO35_15535 IPR000873 AMP-dependent synthetase/ligase CJO35_15535 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_15535 IPR020845 AMP-binding, conserved site CJO35_15540 IPR000182 GNAT domain CJO35_15540 IPR016181 Acyl-CoA N-acyltransferase CJO35_15540 IPR024699 Acetoin utilization protein AcuA CJO35_15545 IPR000644 CBS domain CJO35_15550 IPR000286 Histone deacetylase family CJO35_15550 IPR023801 Histone deacetylase domain CJO35_15550 IPR037138 Histone deacetylase domain superfamily CJO35_15550 IPR003085 Acetoin utilization protein AcuC CJO35_15550 IPR023696 Ureohydrolase domain superfamily CJO35_15555 IPR025713 Motility protein B, N-terminal domain CJO35_15555 IPR036737 OmpA-like domain superfamily CJO35_15555 IPR006665 OmpA-like domain CJO35_15560 IPR000540 Flagellar motor protein MotA, conserved site CJO35_15560 IPR002898 MotA/TolQ/ExbB proton channel CJO35_15565 IPR006377 Catabolite control protein A CJO35_15565 IPR000843 LacI-type HTH domain CJO35_15565 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_15565 IPR028082 Periplasmic binding protein-like I CJO35_15570 IPR036979 Chorismate mutase domain superfamily CJO35_15570 IPR002701 Chorismate mutase II, prokaryotic-type CJO35_15570 IPR006218 DAHP synthetase I/KDSA CJO35_15570 IPR013785 Aldolase-type TIM barrel CJO35_15570 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 CJO35_15570 IPR010954 Chorismate mutase, Firmicutes/Deinococcus CJO35_15580 IPR036249 Thioredoxin-like superfamily CJO35_15580 IPR022551 Protein of unknown function DUF2847 CJO35_15585 IPR024623 Uncharacterised protein family YtxH CJO35_15590 IPR009293 Uncharacterised protein family UPF0478 CJO35_15595 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CJO35_15595 IPR000713 Mur ligase, N-terminal catalytic domain CJO35_15595 IPR036615 Mur ligase, C-terminal domain superfamily CJO35_15595 IPR036565 Mur-like, catalytic domain superfamily CJO35_15595 IPR013221 Mur ligase, central CJO35_15595 IPR004101 Mur ligase, C-terminal CJO35_15600 IPR018541 FtsK gamma domain CJO35_15600 IPR002543 FtsK domain CJO35_15600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_15600 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15600 IPR036390 Winged helix DNA-binding domain superfamily CJO35_15600 IPR041027 FtsK alpha domain CJO35_15600 IPR003593 AAA+ ATPase domain CJO35_15605 IPR027855 Domain of unknown function DUF4479 CJO35_15605 IPR012340 Nucleic acid-binding, OB-fold CJO35_15605 IPR002547 tRNA-binding domain CJO35_15605 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CJO35_15605 IPR037154 YtpR-like superfamily CJO35_15610 IPR010838 Protein of unknown unction DUF1444 CJO35_15615 IPR013766 Thioredoxin domain CJO35_15615 IPR036249 Thioredoxin-like superfamily CJO35_15620 IPR019884 YtoQ family protein CJO35_15625 IPR023367 Peptidase M42, domain 2 CJO35_15625 IPR008007 Peptidase M42 CJO35_15630 IPR025711 PepSY domain CJO35_15635 IPR037062 Malic enzyme, N-terminal domain superfamily CJO35_15635 IPR012301 Malic enzyme, N-terminal domain CJO35_15635 IPR001891 Malic oxidoreductase CJO35_15635 IPR036291 NAD(P)-binding domain superfamily CJO35_15635 IPR012302 Malic enzyme, NAD-binding CJO35_15635 IPR015884 Malic enzyme, conserved site CJO35_15640 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_15640 IPR001279 Metallo-beta-lactamase CJO35_15645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_15645 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CJO35_15650 IPR025547 YtzH-like protein CJO35_15655 IPR002575 Aminoglycoside phosphotransferase CJO35_15655 IPR011009 Protein kinase-like domain superfamily CJO35_15660 IPR011840 Pullulanase, type I CJO35_15660 IPR014756 Immunoglobulin E-set CJO35_15660 IPR013783 Immunoglobulin-like fold CJO35_15660 IPR017853 Glycoside hydrolase superfamily CJO35_15660 IPR004193 Glycoside hydrolase, family 13, N-terminal CJO35_15660 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CJO35_15660 IPR040697 Pullulanase, N1 domain CJO35_15660 IPR013780 Glycosyl hydrolase, all-beta CJO35_15665 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CJO35_15665 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CJO35_15665 IPR005218 Diacylglycerol/lipid kinase CJO35_15665 IPR001206 Diacylglycerol kinase, catalytic domain CJO35_15670 IPR012397 Pullulan 6-glucanohydrolase CJO35_15675 IPR004175 RNA 2',3'-cyclic phosphodiesterase CJO35_15675 IPR009097 Cyclic phosphodiesterase CJO35_15680 IPR005859 Cysteine synthase CysK CJO35_15680 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CJO35_15680 IPR001926 Pyridoxal-phosphate dependent enzyme CJO35_15680 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJO35_15680 IPR005856 Cysteine synthase CJO35_15695 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CJO35_15695 IPR010964 Peptidase M20A, peptidase V-related CJO35_15695 IPR002933 Peptidase M20 CJO35_15695 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_15700 IPR006043 Xanthine/uracil/vitamin C permease CJO35_15700 IPR026033 Azaguanine-like transporters CJO35_15705 IPR036390 Winged helix DNA-binding domain superfamily CJO35_15705 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15705 IPR001034 DeoR-type HTH domain CJO35_15710 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CJO35_15710 IPR036986 RNA-binding S4 domain superfamily CJO35_15710 IPR002942 RNA-binding S4 domain CJO35_15710 IPR020103 Pseudouridine synthase, catalytic domain superfamily CJO35_15710 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CJO35_15710 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CJO35_15710 IPR006145 Pseudouridine synthase, RsuA/RluA CJO35_15715 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CJO35_15715 IPR002797 Polysaccharide biosynthesis protein CJO35_15715 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CJO35_15720 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_15720 IPR023166 HI0933-like insert domain superfamily CJO35_15720 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CJO35_15725 IPR018093 BCCT transporter, conserved site CJO35_15725 IPR000060 BCCT transporter family CJO35_15730 IPR020296 Sporulation protein Cse60 CJO35_15735 IPR036873 Rhodanese-like domain superfamily CJO35_15735 IPR001763 Rhodanese-like domain CJO35_15750 IPR006938 Protein of unknown function DUF624 CJO35_15755 IPR004104 Oxidoreductase, C-terminal CJO35_15755 IPR036291 NAD(P)-binding domain superfamily CJO35_15755 IPR000683 Oxidoreductase, N-terminal CJO35_15765 IPR010905 Glycosyl hydrolase, family 88 CJO35_15765 IPR008928 Six-hairpin glycosidase superfamily CJO35_15765 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_15770 IPR035906 MetI-like superfamily CJO35_15770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_15775 IPR009057 Homeobox-like domain superfamily CJO35_15775 IPR041522 CdaR, GGDEF-like domain CJO35_15775 IPR018060 DNA binding HTH domain, AraC-type CJO35_15780 IPR006059 Bacterial extracellular solute-binding protein CJO35_15785 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_15785 IPR035906 MetI-like superfamily CJO35_15790 IPR001509 NAD-dependent epimerase/dehydratase CJO35_15790 IPR036291 NAD(P)-binding domain superfamily CJO35_15795 IPR029058 Alpha/Beta hydrolase fold CJO35_15795 IPR002925 Dienelactone hydrolase CJO35_15795 IPR002471 Peptidase S9, serine active site CJO35_15805 IPR000847 Transcription regulator HTH, LysR CJO35_15805 IPR005119 LysR, substrate-binding CJO35_15805 IPR036390 Winged helix DNA-binding domain superfamily CJO35_15805 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15810 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_15810 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_15810 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_15815 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_15815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_15815 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CJO35_15815 IPR002302 Leucine-tRNA ligase CJO35_15815 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CJO35_15815 IPR002300 Aminoacyl-tRNA synthetase, class Ia CJO35_15815 IPR025709 Leucyl-tRNA synthetase, editing domain CJO35_15815 IPR015413 Methionyl/Leucyl tRNA synthetase CJO35_15815 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CJO35_15820 IPR025353 Protein of unknown function DUF4257) CJO35_15825 IPR036259 MFS transporter superfamily CJO35_15825 IPR020846 Major facilitator superfamily domain CJO35_15825 IPR011701 Major facilitator superfamily CJO35_15830 IPR004872 Lipoprotein NlpA family CJO35_15835 IPR006876 LMBR1-like membrane protein CJO35_15840 IPR003838 ABC transporter permease protein domain CJO35_15840 IPR025857 MacB-like periplasmic core domain CJO35_15845 IPR017871 ABC transporter, conserved site CJO35_15845 IPR003593 AAA+ ATPase domain CJO35_15845 IPR003439 ABC transporter-like CJO35_15845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_15850 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD CJO35_15855 IPR003593 AAA+ ATPase domain CJO35_15855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_15855 IPR003439 ABC transporter-like CJO35_15860 IPR036390 Winged helix DNA-binding domain superfamily CJO35_15860 IPR000524 Transcription regulator HTH, GntR CJO35_15860 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_15865 IPR019668 Uncharacterised protein family YtzC CJO35_15870 IPR032432 Radical SAM, C-terminal extension CJO35_15870 IPR007197 Radical SAM CJO35_15870 IPR006638 Elp3/MiaB/NifB CJO35_15870 IPR039661 ELP3/YhcC CJO35_15870 IPR023404 Radical SAM, alpha/beta horseshoe CJO35_15870 IPR005911 Protein YhcC-like CJO35_15875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_15875 IPR010719 Putative rRNA methylase CJO35_15880 IPR033380 Glutamate-aspartate symport protein GltP/GltT CJO35_15880 IPR001991 Sodium:dicarboxylate symporter CJO35_15880 IPR018107 Sodium:dicarboxylate symporter, conserved site CJO35_15880 IPR036458 Sodium:dicarboxylate symporter superfamily CJO35_15885 IPR019712 Tetraprenyl-beta-curcumene synthase YtpB-like CJO35_15890 IPR022742 Serine aminopeptidase, S33 CJO35_15890 IPR000073 Alpha/beta hydrolase fold-1 CJO35_15890 IPR029058 Alpha/Beta hydrolase fold CJO35_15895 IPR001451 Hexapeptide repeat CJO35_15895 IPR011004 Trimeric LpxA-like superfamily CJO35_15900 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CJO35_15900 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJO35_15905 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJO35_15905 IPR001296 Glycosyl transferase, family 1 CJO35_15910 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_15910 IPR033738 Asparagine synthase, N-terminal domain CJO35_15910 IPR006426 Asparagine synthase, glutamine-hydrolyzing CJO35_15910 IPR001962 Asparagine synthase CJO35_15910 IPR017932 Glutamine amidotransferase type 2 domain CJO35_15915 IPR022631 S-adenosylmethionine synthetase, conserved site CJO35_15915 IPR022630 S-adenosylmethionine synthetase, C-terminal CJO35_15915 IPR022629 S-adenosylmethionine synthetase, central domain CJO35_15915 IPR022628 S-adenosylmethionine synthetase, N-terminal CJO35_15915 IPR002133 S-adenosylmethionine synthetase CJO35_15915 IPR022636 S-adenosylmethionine synthetase superfamily CJO35_15920 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CJO35_15920 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CJO35_15920 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CJO35_15925 IPR018107 Sodium:dicarboxylate symporter, conserved site CJO35_15925 IPR036458 Sodium:dicarboxylate symporter superfamily CJO35_15925 IPR001991 Sodium:dicarboxylate symporter CJO35_15925 IPR023954 C4-dicarboxylate transport protein CJO35_15930 IPR019699 Protein of unknown function DUF2584 CJO35_15930 IPR015947 PUA-like superfamily CJO35_15935 IPR029058 Alpha/Beta hydrolase fold CJO35_15935 IPR002471 Peptidase S9, serine active site CJO35_15935 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CJO35_15945 IPR017871 ABC transporter, conserved site CJO35_15945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_15945 IPR003593 AAA+ ATPase domain CJO35_15945 IPR003439 ABC transporter-like CJO35_15950 IPR035906 MetI-like superfamily CJO35_15950 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_15955 IPR014078 Nucleoside triphosphatase YtkD CJO35_15955 IPR000086 NUDIX hydrolase domain CJO35_15955 IPR020084 NUDIX hydrolase, conserved site CJO35_15955 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_15955 IPR020476 NUDIX hydrolase CJO35_15965 IPR006480 Bacteriophage holin family CJO35_15970 IPR009078 Ferritin-like superfamily CJO35_15970 IPR023188 DNA-binding protein Dps, conserved site CJO35_15970 IPR002177 DNA-binding protein Dps CJO35_15970 IPR008331 Ferritin/DPS protein domain CJO35_15970 IPR012347 Ferritin-like CJO35_15980 IPR032693 YtkA-like domain CJO35_15985 IPR003815 S-ribosylhomocysteinase (LuxS) CJO35_15985 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CJO35_15985 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CJO35_15990 IPR002696 Putative membrane protein insertion efficiency factor CJO35_15995 IPR036874 Carbonic anhydrase superfamily CJO35_15995 IPR001765 Carbonic anhydrase CJO35_16000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_16000 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CJO35_16000 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CJO35_16005 IPR006129 Adhesin B CJO35_16005 IPR006128 Adhesion lipoprotein CJO35_16005 IPR006127 Periplasmic solute binding protein, ZnuA-like CJO35_16010 IPR042105 Ribosomal protein L31 superfamily CJO35_16010 IPR027493 Ribosomal protein L31 type B CJO35_16010 IPR002150 Ribosomal protein L31 CJO35_16010 IPR034704 L28p-like CJO35_16015 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CJO35_16020 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CJO35_16025 IPR011437 Domain of unknown function DUF1540 CJO35_16035 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CJO35_16035 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CJO35_16035 IPR029065 Enolase C-terminal domain-like CJO35_16035 IPR010197 o-Succinylbenzoate synthase, MenC type 2 CJO35_16035 IPR029017 Enolase-like, N-terminal CJO35_16035 IPR036849 Enolase-like, C-terminal domain superfamily CJO35_16040 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_16040 IPR042099 AMP-dependent synthetase-like superfamily CJO35_16040 IPR010192 2-succinylbenzoate--CoA ligase CJO35_16040 IPR000873 AMP-dependent synthetase/ligase CJO35_16040 IPR020845 AMP-binding, conserved site CJO35_16045 IPR014748 Enoyl-CoA hydratase, C-terminal CJO35_16045 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CJO35_16045 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CJO35_16045 IPR029045 ClpP/crotonase-like domain superfamily CJO35_16045 IPR001753 Enoyl-CoA hydratase/isomerase CJO35_16050 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CJO35_16050 IPR029058 Alpha/Beta hydrolase fold CJO35_16050 IPR000639 Epoxide hydrolase-like CJO35_16050 IPR000073 Alpha/beta hydrolase fold-1 CJO35_16055 IPR029035 DHS-like NAD/FAD-binding domain superfamily CJO35_16055 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CJO35_16055 IPR032264 Menaquinone biosynthesis protein MenD, middle domain CJO35_16055 IPR029061 Thiamin diphosphate-binding fold CJO35_16055 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CJO35_16055 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase CJO35_16060 IPR034681 Isochorismate synthase MenF CJO35_16060 IPR004561 Isochorismate synthase CJO35_16060 IPR015890 Chorismate-utilising enzyme, C-terminal CJO35_16060 IPR005801 ADC synthase CJO35_16065 IPR000537 UbiA prenyltransferase family CJO35_16065 IPR026046 UbiA prenyltransferase domain containing protein 1 CJO35_16065 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CJO35_16070 IPR014240 Regulatory protein, YteA family CJO35_16070 IPR000962 Zinc finger, DksA/TraR C4-type CJO35_16070 IPR037187 DksA, N-terminal domain superfamily CJO35_16075 IPR035090 Phosphorylase pyridoxal-phosphate attachment site CJO35_16075 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CJO35_16075 IPR000811 Glycosyl transferase, family 35 CJO35_16080 IPR013534 Starch synthase, catalytic domain CJO35_16080 IPR011835 Bacterial/plant glycogen synthase CJO35_16080 IPR001296 Glycosyl transferase, family 1 CJO35_16085 IPR005835 Nucleotidyl transferase domain CJO35_16085 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit CJO35_16085 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_16085 IPR011004 Trimeric LpxA-like superfamily CJO35_16090 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_16090 IPR011831 Glucose-1-phosphate adenylyltransferase CJO35_16090 IPR005835 Nucleotidyl transferase domain CJO35_16090 IPR011004 Trimeric LpxA-like superfamily CJO35_16090 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CJO35_16090 IPR005836 ADP-glucose pyrophosphorylase, conserved site CJO35_16095 IPR013783 Immunoglobulin-like fold CJO35_16095 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta CJO35_16095 IPR037439 1,4-alpha-glucan-branching enzyme CJO35_16095 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CJO35_16095 IPR004193 Glycoside hydrolase, family 13, N-terminal CJO35_16095 IPR014756 Immunoglobulin E-set CJO35_16095 IPR017853 Glycoside hydrolase superfamily CJO35_16095 IPR013780 Glycosyl hydrolase, all-beta CJO35_16095 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CJO35_16220 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_16220 IPR000524 Transcription regulator HTH, GntR CJO35_16220 IPR036390 Winged helix DNA-binding domain superfamily CJO35_16220 IPR028082 Periplasmic binding protein-like I CJO35_16220 IPR033532 Arabinose metabolism transcriptional repressor, ligand-binding domain CJO35_16225 IPR012651 Thiamine transporter ThiT CJO35_16230 IPR041999 Sortase D, type 1 CJO35_16230 IPR023365 Sortase domain superfamily CJO35_16230 IPR005754 Sortase family CJO35_16245 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_16245 IPR019734 Tetratricopeptide repeat CJO35_16245 IPR013026 Tetratricopeptide repeat-containing domain CJO35_16245 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_16250 IPR029762 Pyroglutamyl peptidase I, bacterial-type CJO35_16250 IPR033693 Pyroglutamyl peptidase I, Glu active site CJO35_16250 IPR000816 Peptidase C15, pyroglutamyl peptidase I CJO35_16250 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CJO35_16250 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily CJO35_16250 IPR033694 Pyroglutamyl peptidase I, Cys active site CJO35_16255 IPR036291 NAD(P)-binding domain superfamily CJO35_16255 IPR006037 Regulator of K+ conductance, C-terminal CJO35_16255 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CJO35_16255 IPR003148 Regulator of K+ conductance, N-terminal CJO35_16260 IPR003445 Cation transporter CJO35_16260 IPR004772 TrkH potassium transport family CJO35_16270 IPR034660 DinB/YfiT-like putative metalloenzymes CJO35_16270 IPR024775 DinB-like domain CJO35_16275 IPR011037 Pyruvate kinase-like, insert domain superfamily CJO35_16275 IPR005302 Molybdenum cofactor sulfurase, C-terminal CJO35_16280 IPR039697 Iron-type alcohol dehydrogenase-like CJO35_16280 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CJO35_16280 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CJO35_16290 IPR036390 Winged helix DNA-binding domain superfamily CJO35_16290 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_16290 IPR026282 DNA-binding protein, MJ1563 type CJO35_16300 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp CJO35_16300 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative CJO35_16300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_16300 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP CJO35_16305 IPR029066 PLP-binding barrel CJO35_16305 IPR000821 Alanine racemase CJO35_16305 IPR011079 Alanine racemase, C-terminal CJO35_16305 IPR001608 Alanine racemase, N-terminal CJO35_16305 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CJO35_16305 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CJO35_16310 IPR017774 Bicupin, oxalate decarboxylase/oxidase CJO35_16310 IPR011051 RmlC-like cupin domain superfamily CJO35_16310 IPR006045 Cupin 1 CJO35_16310 IPR014710 RmlC-like jelly roll fold CJO35_16340 IPR005502 ADP-ribosylation/Crystallin J1 CJO35_16340 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CJO35_16375 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon CJO35_16385 IPR009695 Diacylglycerol glucosyltransferase, N-terminal CJO35_16395 IPR029052 Metallo-dependent phosphatase-like CJO35_16395 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_16400 IPR003824 Undecaprenyl-diphosphatase UppP CJO35_16405 IPR002549 Transmembrane protein TqsA-like CJO35_16410 IPR036291 NAD(P)-binding domain superfamily CJO35_16410 IPR004104 Oxidoreductase, C-terminal CJO35_16410 IPR000683 Oxidoreductase, N-terminal CJO35_16415 IPR002818 DJ-1/PfpI CJO35_16415 IPR029062 Class I glutamine amidotransferase-like CJO35_16415 IPR006286 Deglycase PfpI CJO35_16420 IPR033479 Double Cache domain 1 CJO35_16420 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_16420 IPR029151 Periplasmic sensor-like domain superfamily CJO35_16420 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CJO35_16420 IPR003660 HAMP domain CJO35_16425 IPR003660 HAMP domain CJO35_16425 IPR033479 Double Cache domain 1 CJO35_16425 IPR029151 Periplasmic sensor-like domain superfamily CJO35_16425 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_16425 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CJO35_16430 IPR003660 HAMP domain CJO35_16430 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_16430 IPR029151 Periplasmic sensor-like domain superfamily CJO35_16430 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding CJO35_16430 IPR033479 Double Cache domain 1 CJO35_16435 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria CJO35_16440 IPR013785 Aldolase-type TIM barrel CJO35_16440 IPR004136 Nitronate monooxygenase CJO35_16445 IPR001602 Uncharacterised protein family UPF0047 CJO35_16445 IPR035917 YjbQ-like superfamily CJO35_16450 IPR032091 Maltogenic Amylase, C-terminal CJO35_16450 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CJO35_16450 IPR013780 Glycosyl hydrolase, all-beta CJO35_16450 IPR017853 Glycoside hydrolase superfamily CJO35_16465 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_16465 IPR013319 Glycoside hydrolase family 11/12 CJO35_16465 IPR002594 Glycoside hydrolase family 12 CJO35_16470 IPR002550 CNNM, transmembrane domain CJO35_16470 IPR036318 FAD-binding, type PCMH-like superfamily CJO35_16470 IPR016169 FAD-binding, type PCMH, subdomain 2 CJO35_16470 IPR005170 Transporter-associated domain CJO35_16470 IPR000644 CBS domain CJO35_16475 IPR007395 Putative neutral zinc metallopeptidase CJO35_16480 IPR038193 Mistic superfamily CJO35_16480 IPR021078 Membrane-integrating protein Mistic CJO35_16485 IPR003148 Regulator of K+ conductance, N-terminal CJO35_16485 IPR036291 NAD(P)-binding domain superfamily CJO35_16485 IPR013099 Potassium channel domain CJO35_16490 IPR036491 YugN-like superfamily CJO35_16490 IPR014967 Uncharacterised protein family, YugN-like CJO35_16500 IPR038330 TspO/MBR-related superfamily CJO35_16500 IPR004307 TspO/MBR-related protein CJO35_16505 IPR000182 GNAT domain CJO35_16505 IPR016181 Acyl-CoA N-acyltransferase CJO35_16510 IPR018189 Phosphoglucose isomerase, conserved site CJO35_16510 IPR035482 Phosphoglucose isomerase, SIS domain 2 CJO35_16510 IPR001672 Phosphoglucose isomerase (PGI) CJO35_16510 IPR035476 Phosphoglucose isomerase, SIS domain 1 CJO35_16515 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CJO35_16515 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CJO35_16520 IPR007211 Protein of unknown function DUF378 CJO35_16525 IPR003029 S1 domain CJO35_16525 IPR012340 Nucleic acid-binding, OB-fold CJO35_16525 IPR022967 RNA-binding domain, S1 CJO35_16530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_16530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_16530 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CJO35_16530 IPR004839 Aminotransferase, class I/classII CJO35_16530 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_16535 IPR000485 AsnC-type HTH domain CJO35_16535 IPR036390 Winged helix DNA-binding domain superfamily CJO35_16535 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_16535 IPR011008 Dimeric alpha-beta barrel CJO35_16535 IPR019888 Transcription regulator AsnC-type CJO35_16535 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJO35_16540 IPR029058 Alpha/Beta hydrolase fold CJO35_16540 IPR000073 Alpha/beta hydrolase fold-1 CJO35_16540 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal CJO35_16540 IPR000639 Epoxide hydrolase-like CJO35_16545 IPR023162 Apc36109-like domain superfamily CJO35_16545 IPR015053 Protein of unknown function DUF1871 CJO35_16555 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_16555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_16555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_16555 IPR004839 Aminotransferase, class I/classII CJO35_16555 IPR027619 Putative C-S lyase CJO35_16565 IPR038080 Kinase associated protein B superfamily CJO35_16565 IPR014916 Kinase associated protein B CJO35_16570 IPR013520 Exonuclease, RNase T/DNA polymerase III CJO35_16570 IPR012337 Ribonuclease H-like superfamily CJO35_16570 IPR036397 Ribonuclease H superfamily CJO35_16575 IPR020846 Major facilitator superfamily domain CJO35_16575 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_16575 IPR011701 Major facilitator superfamily CJO35_16575 IPR036259 MFS transporter superfamily CJO35_16580 IPR036950 Penicillin binding protein transglycosylase domain CJO35_16580 IPR001460 Penicillin-binding protein, transpeptidase CJO35_16580 IPR001264 Glycosyl transferase, family 51 CJO35_16580 IPR012338 Beta-lactamase/transpeptidase-like CJO35_16580 IPR023346 Lysozyme-like domain superfamily CJO35_16585 IPR007263 Protein of unknown function DUF393 CJO35_16590 IPR035289 Protein of unknown function DUF5366 CJO35_16595 IPR039506 SpoOB, alpha-helical domain CJO35_16595 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CJO35_16595 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_16595 IPR033463 Single cache domain 3 CJO35_16595 IPR013767 PAS fold CJO35_16595 IPR000014 PAS domain CJO35_16595 IPR005467 Histidine kinase domain CJO35_16595 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_16595 IPR029151 Periplasmic sensor-like domain superfamily CJO35_16595 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_16600 IPR001789 Signal transduction response regulator, receiver domain CJO35_16600 IPR024187 Signal transduction response regulator, citrate/malate metabolism CJO35_16600 IPR011006 CheY-like superfamily CJO35_16610 IPR000462 CDP-alcohol phosphatidyltransferase CJO35_16610 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CJO35_16615 IPR032816 SNARE associated Golgi protein CJO35_16620 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CJO35_16620 IPR003817 Phosphatidylserine decarboxylase-related CJO35_16620 IPR033177 Phosphatidylserine decarboxylase CJO35_16625 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes CJO35_16625 IPR004679 2-hydroxycarboxylate transporter CJO35_16635 IPR025383 Domain of unknown function DUF4040 CJO35_16635 IPR005663 Monovalent cation proton antiporter subunit A CJO35_16635 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CJO35_16635 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CJO35_16635 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CJO35_16640 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CJO35_16640 IPR005281 Monovalent cation:proton antiporter, subunit B CJO35_16645 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CJO35_16650 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CJO35_16650 IPR003918 NADH:ubiquinone oxidoreductase CJO35_16650 IPR004775 Na(+)/H(+) antiporter subunit D1 CJO35_16655 IPR002758 Na+/H+ antiporter subunit E CJO35_16660 IPR007208 Na(+)/H(+) antiporter subunit F-like CJO35_16665 IPR005133 Na+/H+ antiporter subunit G CJO35_16670 IPR003736 Phenylacetic acid degradation-related domain CJO35_16670 IPR029069 HotDog domain superfamily CJO35_16670 IPR006683 Thioesterase domain CJO35_16675 IPR001789 Signal transduction response regulator, receiver domain CJO35_16675 IPR000792 Transcription regulator LuxR, C-terminal CJO35_16675 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_16675 IPR011006 CheY-like superfamily CJO35_16675 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_16680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_16680 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_16680 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_16680 IPR005467 Histidine kinase domain CJO35_16690 IPR033965 Competence Regulatory Protein ComQ CJO35_16690 IPR008949 Isoprenoid synthase domain superfamily CJO35_16690 IPR000092 Polyprenyl synthetase CJO35_16695 IPR012554 Degradation enzyme regulation protein DegQ CJO35_16710 IPR001633 EAL domain CJO35_16710 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CJO35_16710 IPR035919 EAL domain superfamily CJO35_16710 IPR013976 Metal-dependent hydrolase HDOD CJO35_16715 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CJO35_16715 IPR013785 Aldolase-type TIM barrel CJO35_16715 IPR007229 Nicotinate phosphoribosyltransferase family CJO35_16715 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CJO35_16715 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CJO35_16715 IPR006405 Nicotinate phosphoribosyltransferase pncB-type CJO35_16715 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain CJO35_16720 IPR000868 Isochorismatase-like CJO35_16720 IPR036380 Isochorismatase-like superfamily CJO35_16725 IPR012543 Protein of unknown function DUF1694 CJO35_16725 IPR029064 50S ribosomal protein L30e-like CJO35_16730 IPR020260 Uncharacterised protein family YueH CJO35_16740 IPR002549 Transmembrane protein TqsA-like CJO35_16745 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_16745 IPR036390 Winged helix DNA-binding domain superfamily CJO35_16745 IPR000944 Transcription regulator Rrf2-type CJO35_16750 IPR013094 Alpha/beta hydrolase fold-3 CJO35_16750 IPR001000 Glycoside hydrolase family 10 domain CJO35_16750 IPR017853 Glycoside hydrolase superfamily CJO35_16750 IPR029058 Alpha/Beta hydrolase fold CJO35_16750 IPR031158 Glycosyl hydrolases family 10, active site CJO35_16760 IPR006674 HD domain CJO35_16760 IPR003607 HD/PDEase domain CJO35_16760 IPR006675 HDIG domain CJO35_16765 IPR036291 NAD(P)-binding domain superfamily CJO35_16765 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_16765 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_16770 IPR020212 ESX secretion system protein YueC CJO35_16770 IPR018920 ESAT-6 secretion machinery protein EssA/YueC CJO35_16775 IPR023838 Type VII secretion system EsaA CJO35_16780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_16780 IPR023839 Firmicutes EssC, C-terminal CJO35_16780 IPR002543 FtsK domain CJO35_16780 IPR022206 Firmicutes EssC, N-terminal CJO35_16785 IPR018778 Type VII secretion system EssB CJO35_16790 IPR024962 YukD-like CJO35_16790 IPR014921 EsaB CJO35_16790 IPR029071 Ubiquitin-like domain superfamily CJO35_16795 IPR010310 Type VII secretion system ESAT-6-like CJO35_16795 IPR036689 ESAT-6-like superfamily CJO35_16800 IPR001463 Sodium:alanine symporter CJO35_16805 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CJO35_16805 IPR029016 GAF-like domain superfamily CJO35_16805 IPR041522 CdaR, GGDEF-like domain CJO35_16805 IPR025736 PucR C-terminal helix-turn-helix domain CJO35_16805 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal CJO35_16810 IPR008141 Alanine dehydrogenase CJO35_16810 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CJO35_16810 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CJO35_16810 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CJO35_16810 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CJO35_16810 IPR036291 NAD(P)-binding domain superfamily CJO35_16820 IPR000572 Oxidoreductase, molybdopterin-binding domain CJO35_16820 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily CJO35_16825 IPR003784 BioY protein CJO35_16830 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CJO35_16830 IPR032813 Putative Na+/H+ antiporter, N-terminal CJO35_16835 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CJO35_16835 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CJO35_16835 IPR023042 Peptidase M17, leucine aminopeptidase CJO35_16835 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CJO35_16840 IPR003832 Protein of unknown function DUF212 CJO35_16845 IPR010611 3D domain CJO35_16845 IPR036908 RlpA-like domain superfamily CJO35_16850 IPR025917 Putative membrane protein YuiB CJO35_16855 IPR023753 FAD/NAD(P)-binding domain CJO35_16855 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_16860 IPR022890 Ferredoxin--NADP reductase, type 2 CJO35_16860 IPR023753 FAD/NAD(P)-binding domain CJO35_16860 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_16870 IPR025916 Cold-inducible protein YdjO CJO35_16875 IPR000182 GNAT domain CJO35_16875 IPR016181 Acyl-CoA N-acyltransferase CJO35_16880 IPR017870 FeS cluster insertion, C-terminal, conserved site CJO35_16880 IPR035903 HesB-like domain superfamily CJO35_16880 IPR016092 FeS cluster insertion protein CJO35_16880 IPR000361 FeS cluster biogenesis CJO35_16885 IPR001653 Diaminopimelate epimerase, DapF CJO35_16885 IPR018510 Diaminopimelate epimerase, active site CJO35_16890 IPR002668 Concentrative nucleoside transporter N-terminal domain CJO35_16890 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CJO35_16890 IPR011657 Concentrative nucleoside transporter C-terminal domain CJO35_16890 IPR008276 Concentrative nucleoside transporter CJO35_16895 IPR022916 Protein of unknown function UPF0349 CJO35_16895 IPR009910 Protein of unknown function DUF1450 CJO35_16900 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_16900 IPR023753 FAD/NAD(P)-binding domain CJO35_16905 IPR014922 Domain of unknown function DUF1801 CJO35_16915 IPR019734 Tetratricopeptide repeat CJO35_16915 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_16915 IPR013026 Tetratricopeptide repeat-containing domain CJO35_16915 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_16930 IPR009190 Protein of unknown function DUF1462 CJO35_16930 IPR036249 Thioredoxin-like superfamily CJO35_16930 IPR038218 YuzD-like superfamily CJO35_16935 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CJO35_16935 IPR034904 Fe-S cluster assembly domain superfamily CJO35_16940 IPR011659 WD40-like Beta Propeller CJO35_16940 IPR029058 Alpha/Beta hydrolase fold CJO35_16940 IPR011042 Six-bladed beta-propeller, TolB-like CJO35_16940 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CJO35_16945 IPR006204 GHMP kinase N-terminal domain CJO35_16945 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_16945 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_16945 IPR000870 Homoserine kinase CJO35_16945 IPR006203 GHMP kinase, ATP-binding, conserved site CJO35_16945 IPR036554 GHMP kinase, C-terminal domain superfamily CJO35_16945 IPR013750 GHMP kinase, C-terminal domain CJO35_16950 IPR001926 Pyridoxal-phosphate dependent enzyme CJO35_16950 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CJO35_16950 IPR026260 Threonine synthase, bacterial/archaeal CJO35_16950 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJO35_16950 IPR004450 Threonine synthase-like CJO35_16955 IPR036291 NAD(P)-binding domain superfamily CJO35_16955 IPR019811 Homoserine dehydrogenase, conserved site CJO35_16955 IPR001342 Homoserine dehydrogenase, catalytic CJO35_16955 IPR016204 Homoserine dehydrogenase CJO35_16955 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CJO35_16955 IPR002912 ACT domain CJO35_16960 IPR036291 NAD(P)-binding domain superfamily CJO35_16960 IPR023756 Glyoxylate/hydroxypyruvate reductase B CJO35_16960 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJO35_16960 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CJO35_16960 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO35_16965 IPR011009 Protein kinase-like domain superfamily CJO35_16965 IPR014254 Spore coat protein YutH CJO35_16970 IPR036681 PgpA-like superfamily CJO35_16970 IPR026038 Putative phosphatidylglycerophosphatase CJO35_16970 IPR007686 YutG/PgpA domain CJO35_16975 IPR023214 HAD superfamily CJO35_16975 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 CJO35_16975 IPR006357 HAD-superfamily hydrolase, subfamily IIA CJO35_16975 IPR036412 HAD-like superfamily CJO35_16980 IPR008201 Protein of unknown function DUF86 CJO35_16980 IPR037038 Bsu32300-like superfamily CJO35_16985 IPR038141 YutD-like superfamily CJO35_16985 IPR009370 Protein of unknown function DUF1027 CJO35_16990 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like CJO35_16995 IPR006638 Elp3/MiaB/NifB CJO35_16995 IPR007197 Radical SAM CJO35_16995 IPR003698 Lipoyl synthase CJO35_16995 IPR031691 Lipoyl synthase, N-terminal CJO35_16995 IPR013785 Aldolase-type TIM barrel CJO35_17000 IPR011055 Duplicated hybrid motif CJO35_17000 IPR016047 Peptidase M23 CJO35_17010 IPR000175 Sodium:neurotransmitter symporter CJO35_17010 IPR037272 Sodium:neurotransmitter symporter superfamily CJO35_17015 IPR014197 Sporulation protein YunB CJO35_17020 IPR036493 Hypothetical protein YunC superfamily CJO35_17020 IPR014931 Protein of unknown function DUF1805 CJO35_17025 IPR029052 Metallo-dependent phosphatase-like CJO35_17025 IPR008334 5'-Nucleotidase, C-terminal CJO35_17025 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CJO35_17025 IPR006179 5'-Nucleotidase/apyrase CJO35_17025 IPR011240 Phosphoesterase-related protein YunD CJO35_17030 IPR002781 Transmembrane protein TauE-like CJO35_17035 IPR036520 UPF0759 superfamily CJO35_17035 IPR002763 Protein of unknown function DUF72 CJO35_17045 IPR001647 DNA-binding HTH domain, TetR-type CJO35_17045 IPR009057 Homeobox-like domain superfamily CJO35_17045 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_17045 IPR039538 BetI-type transcriptional repressor, C-terminal CJO35_17045 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CJO35_17055 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CJO35_17055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_17055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_17055 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_17055 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJO35_17055 IPR000192 Aminotransferase class V domain CJO35_17060 IPR002933 Peptidase M20 CJO35_17060 IPR010158 Amidase, carbamoylase-type CJO35_17060 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_17065 IPR012914 Purine catabolism PurC-like domain CJO35_17065 IPR042070 PucR C-terminal helix-turn-helix domain superfamily CJO35_17065 IPR025736 PucR C-terminal helix-turn-helix domain CJO35_17065 IPR041522 CdaR, GGDEF-like domain CJO35_17070 IPR020846 Major facilitator superfamily domain CJO35_17070 IPR011701 Major facilitator superfamily CJO35_17070 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_17070 IPR005829 Sugar transporter, conserved site CJO35_17070 IPR004734 Multidrug resistance protein CJO35_17070 IPR036259 MFS transporter superfamily CJO35_17075 IPR018385 C4-dicarboxylate anaerobic carrier-like CJO35_17080 IPR005940 Anthranilate phosphoribosyl transferase CJO35_17080 IPR000312 Glycosyl transferase, family 3 CJO35_17080 IPR017459 Glycosyl transferase family 3, N-terminal domain CJO35_17080 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CJO35_17080 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CJO35_17090 IPR007346 Endonuclease I CJO35_17100 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_17100 IPR006076 FAD dependent oxidoreductase CJO35_17115 IPR019734 Tetratricopeptide repeat CJO35_17115 IPR040702 Response regulator aspartate phosphatase, N-terminal CJO35_17115 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_17115 IPR013026 Tetratricopeptide repeat-containing domain CJO35_17120 IPR010231 SUF system FeS cluster assembly, SufB CJO35_17120 IPR000825 SUF system FeS cluster assembly, SufBD CJO35_17120 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CJO35_17125 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CJO35_17130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_17130 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_17130 IPR000192 Aminotransferase class V domain CJO35_17130 IPR010970 Cysteine desulfurase, SufS CJO35_17130 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJO35_17130 IPR016454 Cysteine desulfurase CJO35_17130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_17135 IPR000825 SUF system FeS cluster assembly, SufBD CJO35_17135 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CJO35_17135 IPR011542 SUF system FeS cluster assembly, SufD CJO35_17140 IPR003593 AAA+ ATPase domain CJO35_17140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_17140 IPR010230 FeS cluster assembly SUF system, ATPase SufC CJO35_17140 IPR017871 ABC transporter, conserved site CJO35_17140 IPR003439 ABC transporter-like CJO35_17145 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CJO35_17145 IPR027469 Cation efflux transmembrane domain superfamily CJO35_17145 IPR027470 Cation efflux protein, cytoplasmic domain CJO35_17145 IPR002524 Cation efflux protein CJO35_17150 IPR029032 AhpD-like CJO35_17150 IPR003779 Carboxymuconolactone decarboxylase-like CJO35_17155 IPR004872 Lipoprotein NlpA family CJO35_17160 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_17160 IPR035906 MetI-like superfamily CJO35_17165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_17165 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CJO35_17165 IPR003593 AAA+ ATPase domain CJO35_17165 IPR003439 ABC transporter-like CJO35_17165 IPR017871 ABC transporter, conserved site CJO35_17165 IPR018449 NIL domain CJO35_17165 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CJO35_17170 IPR036527 SCP2 sterol-binding domain superfamily CJO35_17170 IPR003033 SCP2 sterol-binding domain CJO35_17175 IPR013766 Thioredoxin domain CJO35_17175 IPR036249 Thioredoxin-like superfamily CJO35_17180 IPR034141 Ribonuclease M5-like, TOPRIM domain CJO35_17180 IPR006171 TOPRIM domain CJO35_17185 IPR020140 Uncharacterised protein family YusG CJO35_17190 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CJO35_17190 IPR002930 Glycine cleavage system H-protein CJO35_17190 IPR000089 Biotin/lipoyl attachment CJO35_17190 IPR033753 Glycine cleavage system H-protein/Simiate CJO35_17190 IPR017453 Glycine cleavage system H-protein, subgroup CJO35_17190 IPR011053 Single hybrid motif CJO35_17195 IPR036249 Thioredoxin-like superfamily CJO35_17195 IPR006504 Transcriptional regulator Spx/MgsR CJO35_17195 IPR006660 Arsenate reductase-like CJO35_17200 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CJO35_17200 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CJO35_17200 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CJO35_17200 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CJO35_17200 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CJO35_17200 IPR006089 Acyl-CoA dehydrogenase, conserved site CJO35_17200 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CJO35_17205 IPR020617 Thiolase, C-terminal CJO35_17205 IPR020613 Thiolase, conserved site CJO35_17205 IPR020616 Thiolase, N-terminal CJO35_17205 IPR002155 Thiolase CJO35_17205 IPR016039 Thiolase-like CJO35_17205 IPR020615 Thiolase, acyl-enzyme intermediate active site CJO35_17205 IPR020610 Thiolase, active site CJO35_17210 IPR001753 Enoyl-CoA hydratase/isomerase CJO35_17210 IPR036291 NAD(P)-binding domain superfamily CJO35_17210 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CJO35_17210 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CJO35_17210 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_17210 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_17210 IPR029045 ClpP/crotonase-like domain superfamily CJO35_17215 IPR025625 YuzL-like protein CJO35_17225 IPR012851 Spore coat protein CotF-like CJO35_17230 IPR020393 Uncharacterised protein family YusU CJO35_17240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_17240 IPR003593 AAA+ ATPase domain CJO35_17240 IPR017871 ABC transporter, conserved site CJO35_17240 IPR003439 ABC transporter-like CJO35_17245 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_17245 IPR037294 ABC transporter, BtuC-like CJO35_17250 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_17250 IPR037294 ABC transporter, BtuC-like CJO35_17255 IPR002491 ABC transporter periplasmic binding domain CJO35_17260 IPR025623 YusW-like protein CJO35_17270 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CJO35_17270 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CJO35_17270 IPR012338 Beta-lactamase/transpeptidase-like CJO35_17270 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CJO35_17275 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_17275 IPR036291 NAD(P)-binding domain superfamily CJO35_17275 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_17280 IPR009078 Ferritin-like superfamily CJO35_17280 IPR012347 Ferritin-like CJO35_17280 IPR008331 Ferritin/DPS protein domain CJO35_17280 IPR002177 DNA-binding protein Dps CJO35_17280 IPR023188 DNA-binding protein Dps, conserved site CJO35_17285 IPR001478 PDZ domain CJO35_17285 IPR001940 Peptidase S1C CJO35_17285 IPR009003 Peptidase S1, PA clan CJO35_17285 IPR036034 PDZ superfamily CJO35_17290 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17290 IPR011006 CheY-like superfamily CJO35_17290 IPR001789 Signal transduction response regulator, receiver domain CJO35_17290 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_17290 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_17290 IPR039420 Transcriptional regulatory protein WalR-like CJO35_17295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_17295 IPR003660 HAMP domain CJO35_17295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_17295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_17295 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_17295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_17295 IPR005467 Histidine kinase domain CJO35_17305 IPR001647 DNA-binding HTH domain, TetR-type CJO35_17305 IPR009057 Homeobox-like domain superfamily CJO35_17305 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJO35_17310 IPR008948 L-Aspartase-like CJO35_17310 IPR022761 Fumarate lyase, N-terminal CJO35_17310 IPR000362 Fumarate lyase family CJO35_17310 IPR020557 Fumarate lyase, conserved site CJO35_17310 IPR005677 Fumarate hydratase, class II CJO35_17310 IPR024083 Fumarase/histidase, N-terminal CJO35_17310 IPR018951 Fumarase C, C-terminal CJO35_17315 IPR025088 Protein of unknown function DUF3970 CJO35_17320 IPR004995 Bacillus/Clostridium Ger spore germination protein CJO35_17325 IPR004761 Spore germination GerAB CJO35_17330 IPR008844 Spore germination GerAC CJO35_17330 IPR038501 Spore germination GerAC superfamily CJO35_17340 IPR000792 Transcription regulator LuxR, C-terminal CJO35_17340 IPR001789 Signal transduction response regulator, receiver domain CJO35_17340 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_17340 IPR011006 CheY-like superfamily CJO35_17345 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_17345 IPR017202 Sensor histidine kinase LiaS/VraS CJO35_17345 IPR005467 Histidine kinase domain CJO35_17345 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_17345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_17345 IPR003660 HAMP domain CJO35_17350 IPR016975 Cell wall-active antibiotic response protein CJO35_17350 IPR024425 Cell wall-active antibiotics response 4TMS YvqF CJO35_17360 IPR007157 PspA/IM30 CJO35_17370 IPR011050 Pectin lyase fold/virulence factor CJO35_17370 IPR033131 Pectinesterase, Asp active site CJO35_17370 IPR000070 Pectinesterase, catalytic CJO35_17370 IPR012334 Pectin lyase fold CJO35_17375 IPR036451 Cobalamin adenosyltransferase-like superfamily CJO35_17375 IPR016030 Cobalamin adenosyltransferase-like CJO35_17375 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CJO35_17380 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_17380 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_17380 IPR036291 NAD(P)-binding domain superfamily CJO35_17380 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CJO35_17395 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CJO35_17395 IPR039697 Iron-type alcohol dehydrogenase-like CJO35_17395 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CJO35_17400 IPR013785 Aldolase-type TIM barrel CJO35_17400 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CJO35_17400 IPR002220 DapA-like CJO35_17400 IPR020624 Schiff base-forming aldolase, conserved site CJO35_17400 IPR020625 Schiff base-forming aldolase, active site CJO35_17405 IPR003593 AAA+ ATPase domain CJO35_17405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_17405 IPR003439 ABC transporter-like CJO35_17410 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_17410 IPR037294 ABC transporter, BtuC-like CJO35_17415 IPR002491 ABC transporter periplasmic binding domain CJO35_17420 IPR000485 AsnC-type HTH domain CJO35_17420 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17420 IPR036390 Winged helix DNA-binding domain superfamily CJO35_17420 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_17420 IPR011711 GntR, C-terminal CJO35_17420 IPR000524 Transcription regulator HTH, GntR CJO35_17425 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_17425 IPR036291 NAD(P)-binding domain superfamily CJO35_17425 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_17430 IPR005302 Molybdenum cofactor sulfurase, C-terminal CJO35_17430 IPR011037 Pyruvate kinase-like, insert domain superfamily CJO35_17430 IPR005163 3-alpha domain CJO35_17435 IPR036390 Winged helix DNA-binding domain superfamily CJO35_17435 IPR000847 Transcription regulator HTH, LysR CJO35_17435 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain CJO35_17435 IPR005119 LysR, substrate-binding CJO35_17435 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17440 IPR011050 Pectin lyase fold/virulence factor CJO35_17440 IPR012334 Pectin lyase fold CJO35_17440 IPR000743 Glycoside hydrolase, family 28 CJO35_17440 IPR006626 Parallel beta-helix repeat CJO35_17445 IPR013974 SAF domain CJO35_17445 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CJO35_17450 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_17450 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_17450 IPR023668 Altronate oxidoreductase CJO35_17450 IPR036291 NAD(P)-binding domain superfamily CJO35_17450 IPR000669 Mannitol dehydrogenase CJO35_17450 IPR013118 Mannitol dehydrogenase, C-terminal CJO35_17450 IPR013131 Mannitol dehydrogenase, N-terminal CJO35_17455 IPR028082 Periplasmic binding protein-like I CJO35_17455 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_17455 IPR000843 LacI-type HTH domain CJO35_17460 IPR001927 Sodium:galactoside symporter CJO35_17460 IPR039672 Lactose permease-like CJO35_17460 IPR020846 Major facilitator superfamily domain CJO35_17460 IPR018043 Sodium:galactoside symporter, conserved site CJO35_17460 IPR036259 MFS transporter superfamily CJO35_17465 IPR032466 Metal-dependent hydrolase CJO35_17465 IPR003766 Uronate isomerase CJO35_17470 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_17470 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_17470 IPR005467 Histidine kinase domain CJO35_17470 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_17470 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_17470 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_17475 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17475 IPR039420 Transcriptional regulatory protein WalR-like CJO35_17475 IPR001789 Signal transduction response regulator, receiver domain CJO35_17475 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_17475 IPR011006 CheY-like superfamily CJO35_17475 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_17480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_17480 IPR003439 ABC transporter-like CJO35_17480 IPR017871 ABC transporter, conserved site CJO35_17480 IPR003593 AAA+ ATPase domain CJO35_17485 IPR037294 ABC transporter, BtuC-like CJO35_17485 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_17490 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_17490 IPR037294 ABC transporter, BtuC-like CJO35_17495 IPR002293 Amino acid/polyamine transporter I CJO35_17500 IPR014220 Small acid-soluble spore protein, SspJ CJO35_17505 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CJO35_17510 IPR012160 Lipoteichoic acid synthase-like CJO35_17510 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_17510 IPR000917 Sulfatase, N-terminal CJO35_17515 IPR036259 MFS transporter superfamily CJO35_17515 IPR004638 Drug resistance transporter EmrB-like CJO35_17515 IPR020846 Major facilitator superfamily domain CJO35_17515 IPR011701 Major facilitator superfamily CJO35_17520 IPR020471 Aldo/keto reductase CJO35_17520 IPR023210 NADP-dependent oxidoreductase domain CJO35_17520 IPR036812 NADP-dependent oxidoreductase domain superfamily CJO35_17520 IPR018170 Aldo/keto reductase, conserved site CJO35_17525 IPR000600 ROK family CJO35_17530 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_17530 IPR000192 Aminotransferase class V domain CJO35_17530 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJO35_17530 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_17530 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_17540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_17540 IPR000212 DNA helicase, UvrD/REP type CJO35_17540 IPR014016 UvrD-like helicase, ATP-binding domain CJO35_17540 IPR027785 UvrD-like helicase C-terminal domain CJO35_17545 IPR005115 Uncharacterised domain UPF0126 CJO35_17550 IPR016181 Acyl-CoA N-acyltransferase CJO35_17550 IPR007344 GrpB/Dephospho-CoA kinase CJO35_17550 IPR000182 GNAT domain CJO35_17555 IPR016181 Acyl-CoA N-acyltransferase CJO35_17555 IPR000182 GNAT domain CJO35_17555 IPR017813 Mycothiol acetyltransferase CJO35_17560 IPR023380 DsbB-like superfamily CJO35_17560 IPR003752 Disulphide bond formation protein DsbB/BdbC CJO35_17560 IPR012187 Disulphide bond formation protein BdbC CJO35_17565 IPR013766 Thioredoxin domain CJO35_17565 IPR012336 Thioredoxin-like fold CJO35_17565 IPR036249 Thioredoxin-like superfamily CJO35_17570 IPR018303 P-type ATPase, phosphorylation site CJO35_17570 IPR023298 P-type ATPase, transmembrane domain superfamily CJO35_17570 IPR008250 P-type ATPase, A domain superfamily CJO35_17570 IPR027256 P-type ATPase, subfamily IB CJO35_17570 IPR036412 HAD-like superfamily CJO35_17570 IPR001757 P-type ATPase CJO35_17570 IPR006121 Heavy metal-associated domain, HMA CJO35_17570 IPR017969 Heavy-metal-associated, conserved site CJO35_17570 IPR023214 HAD superfamily CJO35_17570 IPR036163 Heavy metal-associated domain superfamily CJO35_17570 IPR023299 P-type ATPase, cytoplasmic domain N CJO35_17580 IPR035906 MetI-like superfamily CJO35_17580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_17585 IPR035906 MetI-like superfamily CJO35_17585 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_17590 IPR017853 Glycoside hydrolase superfamily CJO35_17590 IPR013780 Glycosyl hydrolase, all-beta CJO35_17590 IPR011013 Galactose mutarotase-like domain superfamily CJO35_17590 IPR000322 Glycoside hydrolase family 31 CJO35_17590 IPR025887 Glycoside hydrolase family 31, N-terminal domain CJO35_17595 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CJO35_17595 IPR001764 Glycoside hydrolase, family 3, N-terminal CJO35_17595 IPR017853 Glycoside hydrolase superfamily CJO35_17595 IPR013783 Immunoglobulin-like fold CJO35_17595 IPR037524 PA14/GLEYA domain CJO35_17595 IPR011658 PA14 domain CJO35_17595 IPR026891 Fibronectin type III-like domain CJO35_17595 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily CJO35_17595 IPR002772 Glycoside hydrolase family 3 C-terminal domain CJO35_17600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_17600 IPR017871 ABC transporter, conserved site CJO35_17600 IPR003439 ABC transporter-like CJO35_17600 IPR003593 AAA+ ATPase domain CJO35_17605 IPR037294 ABC transporter, BtuC-like CJO35_17605 IPR001626 ABC transporter, TroCD-like CJO35_17610 IPR006129 Adhesin B CJO35_17610 IPR006127 Periplasmic solute binding protein, ZnuA-like CJO35_17610 IPR006128 Adhesion lipoprotein CJO35_17620 IPR009057 Homeobox-like domain superfamily CJO35_17620 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17620 IPR000281 Helix-turn-helix protein RpiR CJO35_17620 IPR035472 RpiR-like, SIS domain CJO35_17620 IPR001347 Sugar isomerase (SIS) CJO35_17630 IPR004715 Phosphotransferase system, IIA component fructose subfamily CJO35_17630 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CJO35_17630 IPR036095 PTS system IIB component-like superfamily CJO35_17630 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_17630 IPR013011 Phosphotransferase system, EIIB component, type 2 CJO35_17630 IPR002178 PTS EIIA type-2 domain CJO35_17630 IPR016152 Phosphotransferase/anion transporter CJO35_17630 IPR006327 Phosphotransferase system, fructose IIC component CJO35_17630 IPR013014 Phosphotransferase system, EIIC component, type 2 CJO35_17640 IPR000771 Fructose-bisphosphate aldolase, class-II CJO35_17640 IPR013785 Aldolase-type TIM barrel CJO35_17640 IPR023955 D-tagatose-bisphosphate aldolase, class II, subunit GatY CJO35_17640 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY CJO35_17645 IPR018303 P-type ATPase, phosphorylation site CJO35_17645 IPR027256 P-type ATPase, subfamily IB CJO35_17645 IPR036163 Heavy metal-associated domain superfamily CJO35_17645 IPR023299 P-type ATPase, cytoplasmic domain N CJO35_17645 IPR006122 Heavy metal-associated domain, copper ion-binding CJO35_17645 IPR017969 Heavy-metal-associated, conserved site CJO35_17645 IPR023214 HAD superfamily CJO35_17645 IPR036412 HAD-like superfamily CJO35_17645 IPR008250 P-type ATPase, A domain superfamily CJO35_17645 IPR023298 P-type ATPase, transmembrane domain superfamily CJO35_17645 IPR001757 P-type ATPase CJO35_17645 IPR006121 Heavy metal-associated domain, HMA CJO35_17650 IPR000428 Copper ion binding protein CJO35_17650 IPR017969 Heavy-metal-associated, conserved site CJO35_17650 IPR006122 Heavy metal-associated domain, copper ion-binding CJO35_17650 IPR006121 Heavy metal-associated domain, HMA CJO35_17650 IPR036163 Heavy metal-associated domain superfamily CJO35_17655 IPR003735 Metal-sensitive transcriptional repressor CJO35_17655 IPR038390 Metal-sensitive transcriptional repressor superfamily CJO35_17660 IPR006286 Deglycase PfpI CJO35_17660 IPR002818 DJ-1/PfpI CJO35_17660 IPR029062 Class I glutamine amidotransferase-like CJO35_17665 IPR037171 NagB/RpiA transferase-like CJO35_17665 IPR014036 DeoR C-terminal sensor domain CJO35_17665 IPR001034 DeoR-type HTH domain CJO35_17665 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CJO35_17665 IPR036390 Winged helix DNA-binding domain superfamily CJO35_17665 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17670 IPR018485 Carbohydrate kinase, FGGY, C-terminal CJO35_17670 IPR013449 Rhamnulokinase CJO35_17670 IPR018484 Carbohydrate kinase, FGGY, N-terminal CJO35_17670 IPR000577 Carbohydrate kinase, FGGY CJO35_17675 IPR036237 Xylose isomerase-like superfamily CJO35_17675 IPR013451 L-rhamnose catabolism isomerase CJO35_17675 IPR013022 Xylose isomerase-like, TIM barrel domain CJO35_17685 IPR001303 Class II aldolase/adducin N-terminal CJO35_17685 IPR036409 Class II aldolase/adducin N-terminal domain superfamily CJO35_17685 IPR036291 NAD(P)-binding domain superfamily CJO35_17685 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_17685 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase CJO35_17695 IPR011701 Major facilitator superfamily CJO35_17695 IPR020846 Major facilitator superfamily domain CJO35_17695 IPR036259 MFS transporter superfamily CJO35_17700 IPR030903 Cyclodipeptide synthase CJO35_17700 IPR038622 Cyclodipeptide synthase superfamily CJO35_17705 IPR017972 Cytochrome P450, conserved site CJO35_17705 IPR036396 Cytochrome P450 superfamily CJO35_17705 IPR001128 Cytochrome P450 CJO35_17705 IPR002397 Cytochrome P450, B-class CJO35_17705 IPR030904 Cytochrome P450, CypX CJO35_17715 IPR036390 Winged helix DNA-binding domain superfamily CJO35_17715 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17715 IPR000835 MarR-type HTH domain CJO35_17720 IPR000120 Amidase CJO35_17720 IPR036928 Amidase signature (AS) superfamily CJO35_17720 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CJO35_17720 IPR023631 Amidase signature domain CJO35_17725 IPR000683 Oxidoreductase, N-terminal CJO35_17725 IPR004104 Oxidoreductase, C-terminal CJO35_17725 IPR036291 NAD(P)-binding domain superfamily CJO35_17730 IPR029039 Flavoprotein-like superfamily CJO35_17730 IPR023048 NADH-azoreductase, FMN-dependent CJO35_17730 IPR003680 Flavodoxin-like fold CJO35_17745 IPR014284 RNA polymerase sigma-70 like domain CJO35_17745 IPR007630 RNA polymerase sigma-70 region 4 CJO35_17745 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_17750 IPR024419 Protein of unknown function YvrJ CJO35_17755 IPR014710 RmlC-like jelly roll fold CJO35_17755 IPR006045 Cupin 1 CJO35_17755 IPR017774 Bicupin, oxalate decarboxylase/oxidase CJO35_17755 IPR011051 RmlC-like cupin domain superfamily CJO35_17760 IPR025912 Regulatory protein YrvL CJO35_17790 IPR006197 Peptidase S24, LexA-like CJO35_17790 IPR011991 ArsR-like helix-turn-helix domain CJO35_17790 IPR006200 Transcription regulator LexA CJO35_17790 IPR039418 LexA-like CJO35_17790 IPR036286 LexA/Signal peptidase-like superfamily CJO35_17790 IPR006199 LexA repressor, DNA-binding domain CJO35_17790 IPR036390 Winged helix DNA-binding domain superfamily CJO35_17790 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17790 IPR015927 Peptidase S24/S26A/S26B/S26C CJO35_17845 IPR002477 Peptidoglycan binding-like CJO35_17845 IPR036366 PGBD superfamily CJO35_17845 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CJO35_17845 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CJO35_17845 IPR036365 PGBD-like superfamily CJO35_17850 IPR006479 Holin CJO35_17855 IPR019715 Haemolysin XhlA CJO35_17870 IPR008983 Tumour necrosis factor-like domain superfamily CJO35_17880 IPR025987 GW domain CJO35_17880 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CJO35_17880 IPR038200 GW domain superfamily CJO35_17890 IPR023346 Lysozyme-like domain superfamily CJO35_17890 IPR008258 Transglycosylase SLT domain 1 CJO35_17935 IPR029045 ClpP/crotonase-like domain superfamily CJO35_17935 IPR033135 ClpP, histidine active site CJO35_17935 IPR001907 ATP-dependent Clp protease proteolytic subunit CJO35_17935 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJO35_17935 IPR018215 ClpP, Ser active site CJO35_17950 IPR036390 Winged helix DNA-binding domain superfamily CJO35_17950 IPR005021 Terminase large subunit, Lambdalikevirus-type CJO35_17950 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_17985 IPR020108 Spore coat protein CotD CJO35_18105 IPR023620 Small protein B CJO35_18105 IPR000037 SsrA-binding protein CJO35_18105 IPR020081 SsrA-binding protein, conserved site CJO35_18110 IPR011805 Ribonuclease R CJO35_18110 IPR004476 Ribonuclease II/ribonuclease R CJO35_18110 IPR022966 Ribonuclease II/R, conserved site CJO35_18110 IPR001900 Ribonuclease II/R CJO35_18110 IPR013223 Ribonuclease B, N-terminal OB domain CJO35_18110 IPR003029 S1 domain CJO35_18110 IPR040476 RNase II/RNase R, cold shock domain CJO35_18110 IPR011129 Cold shock domain CJO35_18110 IPR022967 RNA-binding domain, S1 CJO35_18110 IPR012340 Nucleic acid-binding, OB-fold CJO35_18115 IPR022742 Serine aminopeptidase, S33 CJO35_18115 IPR029058 Alpha/Beta hydrolase fold CJO35_18115 IPR012354 Esterase/lipase CJO35_18120 IPR004692 Preprotein translocase SecG subunit CJO35_18125 IPR040678 AbrB, C-terminal CJO35_18125 IPR007159 SpoVT-AbrB domain CJO35_18125 IPR037914 SpoVT-AbrB domain superfamily CJO35_18130 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_18130 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_18135 IPR016759 HTH-type transcriptional repressor RghR CJO35_18135 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_18135 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_18140 IPR016759 HTH-type transcriptional repressor RghR CJO35_18140 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_18140 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_18145 IPR035906 MetI-like superfamily CJO35_18145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_18150 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CJO35_18155 IPR035906 MetI-like superfamily CJO35_18155 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_18160 IPR005892 Glycine betaine transport ATP-binding subunit CJO35_18160 IPR017871 ABC transporter, conserved site CJO35_18160 IPR003439 ABC transporter-like CJO35_18160 IPR003593 AAA+ ATPase domain CJO35_18160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18160 IPR000644 CBS domain CJO35_18165 IPR026282 DNA-binding protein, MJ1563 type CJO35_18165 IPR036390 Winged helix DNA-binding domain superfamily CJO35_18165 IPR000835 MarR-type HTH domain CJO35_18165 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_18170 IPR002771 Multiple antibiotic resistance (MarC)-related CJO35_18185 IPR002491 ABC transporter periplasmic binding domain CJO35_18195 IPR029062 Class I glutamine amidotransferase-like CJO35_18195 IPR002818 DJ-1/PfpI CJO35_18200 IPR020811 Enolase, N-terminal CJO35_18200 IPR020809 Enolase, conserved site CJO35_18200 IPR020810 Enolase, C-terminal TIM barrel domain CJO35_18200 IPR029017 Enolase-like, N-terminal CJO35_18200 IPR036849 Enolase-like, C-terminal domain superfamily CJO35_18200 IPR000941 Enolase CJO35_18205 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_18205 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CJO35_18205 IPR011258 BPG-independent PGAM, N-terminal CJO35_18205 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CJO35_18205 IPR006124 Metalloenzyme CJO35_18210 IPR013785 Aldolase-type TIM barrel CJO35_18210 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CJO35_18210 IPR000652 Triosephosphate isomerase CJO35_18210 IPR020861 Triosephosphate isomerase, active site CJO35_18210 IPR035990 Triosephosphate isomerase superfamily CJO35_18215 IPR015911 Phosphoglycerate kinase, conserved site CJO35_18215 IPR015824 Phosphoglycerate kinase, N-terminal CJO35_18215 IPR036043 Phosphoglycerate kinase superfamily CJO35_18215 IPR001576 Phosphoglycerate kinase CJO35_18220 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CJO35_18220 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CJO35_18220 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CJO35_18220 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CJO35_18220 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CJO35_18220 IPR036291 NAD(P)-binding domain superfamily CJO35_18225 IPR036390 Winged helix DNA-binding domain superfamily CJO35_18225 IPR037171 NagB/RpiA transferase-like CJO35_18225 IPR007324 Sugar-binding domain, putative CJO35_18225 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_18230 IPR011251 Luciferase-like domain CJO35_18230 IPR036661 Luciferase-like domain superfamily CJO35_18230 IPR019949 Luciferase family oxidoreductase, group 1 CJO35_18235 IPR004841 Amino acid permease/ SLC12A domain CJO35_18245 IPR017871 ABC transporter, conserved site CJO35_18245 IPR003439 ABC transporter-like CJO35_18245 IPR003593 AAA+ ATPase domain CJO35_18245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18255 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CJO35_18255 IPR037171 NagB/RpiA transferase-like CJO35_18255 IPR022823 Lactate utilization protein C CJO35_18255 IPR003741 LUD domain CJO35_18260 IPR003741 LUD domain CJO35_18260 IPR022825 Lactate utilization protein B CJO35_18260 IPR037171 NagB/RpiA transferase-like CJO35_18260 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CJO35_18260 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJO35_18260 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_18260 IPR009051 Alpha-helical ferredoxin CJO35_18260 IPR024569 4Fe-4S binding protein, C-terminal CJO35_18260 IPR004452 4Fe-4S binding protein CJO35_18265 IPR022822 Lactate utilization protein A CJO35_18265 IPR004017 Cysteine-rich domain CJO35_18270 IPR036390 Winged helix DNA-binding domain superfamily CJO35_18270 IPR000524 Transcription regulator HTH, GntR CJO35_18270 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_18270 IPR011711 GntR, C-terminal CJO35_18270 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_18275 IPR003804 L-lactate permease CJO35_18280 IPR000394 RNA polymerase sigma factor 54 CJO35_18280 IPR007046 RNA polymerase sigma factor 54, core-binding domain CJO35_18280 IPR007634 RNA polymerase sigma factor 54, DNA-binding CJO35_18280 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CJO35_18285 IPR037247 YvfG domain superfamily CJO35_18285 IPR018590 Uncharacterised domain YvfG CJO35_18290 IPR007345 Polysaccharide pyruvyl transferase CJO35_18295 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJO35_18295 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_18295 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_18295 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_18300 IPR001451 Hexapeptide repeat CJO35_18300 IPR018357 Hexapeptide transferase, conserved site CJO35_18300 IPR041561 PglD, N-terminal CJO35_18300 IPR020019 Sialic acid O-acyltransferase NeuD-like CJO35_18300 IPR011004 Trimeric LpxA-like superfamily CJO35_18305 IPR003362 Bacterial sugar transferase CJO35_18310 IPR002797 Polysaccharide biosynthesis protein CJO35_18310 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CJO35_18315 IPR001173 Glycosyltransferase 2-like CJO35_18315 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_18320 IPR007345 Polysaccharide pyruvyl transferase CJO35_18325 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_18325 IPR001173 Glycosyltransferase 2-like CJO35_18335 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJO35_18335 IPR001296 Glycosyl transferase, family 1 CJO35_18340 IPR001173 Glycosyltransferase 2-like CJO35_18340 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_18345 IPR001296 Glycosyl transferase, family 1 CJO35_18345 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJO35_18350 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CJO35_18350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_18350 IPR036291 NAD(P)-binding domain superfamily CJO35_18355 IPR025669 AAA domain CJO35_18355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18355 IPR005702 Exopolysaccharide synthesis protein CJO35_18360 IPR003856 Polysaccharide chain length determinant N-terminal domain CJO35_18365 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily CJO35_18365 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_18365 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_18365 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain CJO35_18370 IPR029039 Flavoprotein-like superfamily CJO35_18370 IPR003680 Flavodoxin-like fold CJO35_18375 IPR020846 Major facilitator superfamily domain CJO35_18375 IPR011701 Major facilitator superfamily CJO35_18375 IPR000849 Sugar phosphate transporter CJO35_18375 IPR036259 MFS transporter superfamily CJO35_18380 IPR029009 Allosteric substrate binding domain superfamily CJO35_18380 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJO35_18380 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO35_18380 IPR036291 NAD(P)-binding domain superfamily CJO35_18380 IPR006236 D-3-phosphoglycerate dehydrogenase CJO35_18380 IPR002912 ACT domain CJO35_18380 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CJO35_18380 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CJO35_18385 IPR005255 PdxA family CJO35_18390 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily CJO35_18390 IPR042213 Nucleotide-binding, C-terminal domain superfamily CJO35_18390 IPR010737 Four-carbon acid sugar kinase, N-terminal domain CJO35_18390 IPR031475 Nucleotide-binding C-terminal domain CJO35_18395 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CJO35_18395 IPR039697 Iron-type alcohol dehydrogenase-like CJO35_18395 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CJO35_18400 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CJO35_18400 IPR013785 Aldolase-type TIM barrel CJO35_18400 IPR002220 DapA-like CJO35_18400 IPR020625 Schiff base-forming aldolase, active site CJO35_18400 IPR020624 Schiff base-forming aldolase, conserved site CJO35_18405 IPR000014 PAS domain CJO35_18405 IPR035965 PAS domain superfamily CJO35_18405 IPR025944 Sigma-54 interaction domain, conserved site CJO35_18405 IPR009057 Homeobox-like domain superfamily CJO35_18405 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJO35_18405 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJO35_18405 IPR002078 RNA polymerase sigma factor 54 interaction domain CJO35_18405 IPR002197 DNA binding HTH domain, Fis-type CJO35_18405 IPR029016 GAF-like domain superfamily CJO35_18405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18405 IPR003593 AAA+ ATPase domain CJO35_18415 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CJO35_18415 IPR013785 Aldolase-type TIM barrel CJO35_18420 IPR003469 Glycoside hydrolase, family 68 CJO35_18420 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_18425 IPR001362 Glycoside hydrolase, family 32 CJO35_18425 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_18425 IPR013189 Glycosyl hydrolase family 32, C-terminal CJO35_18425 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_18425 IPR013148 Glycosyl hydrolase family 32, N-terminal CJO35_18440 IPR033135 ClpP, histidine active site CJO35_18440 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJO35_18440 IPR029045 ClpP/crotonase-like domain superfamily CJO35_18440 IPR001907 ATP-dependent Clp protease proteolytic subunit CJO35_18445 IPR031100 LOG family CJO35_18445 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CJO35_18450 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CJO35_18450 IPR011411 NTP Pyrophosphohydrolase MazG-related CJO35_18455 IPR003607 HD/PDEase domain CJO35_18455 IPR006674 HD domain CJO35_18460 IPR036513 STAS domain superfamily CJO35_18460 IPR011547 SLC26A/SulP transporter domain CJO35_18460 IPR002645 STAS domain CJO35_18460 IPR001902 SLC26A/SulP transporter CJO35_18465 IPR001765 Carbonic anhydrase CJO35_18465 IPR036874 Carbonic anhydrase superfamily CJO35_18470 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CJO35_18470 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CJO35_18470 IPR036291 NAD(P)-binding domain superfamily CJO35_18470 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJO35_18470 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO35_18475 IPR002563 Flavin reductase like domain CJO35_18475 IPR012349 FMN-binding split barrel CJO35_18480 IPR011991 ArsR-like helix-turn-helix domain CJO35_18480 IPR001845 HTH ArsR-type DNA-binding domain CJO35_18480 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_18480 IPR036390 Winged helix DNA-binding domain superfamily CJO35_18485 IPR016191 Ribonuclease/ribotoxin CJO35_18485 IPR000026 Guanine-specific ribonuclease N1/T1/U2 CJO35_18485 IPR001887 Barnase CJO35_18490 IPR035905 Barstar-like superfamily CJO35_18490 IPR000468 Barstar (barnase inhibitor) CJO35_18495 IPR001447 Arylamine N-acetyltransferase CJO35_18495 IPR038765 Papain-like cysteine peptidase superfamily CJO35_18500 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CJO35_18500 IPR035895 HPr-like superfamily CJO35_18500 IPR000032 Phosphocarrier protein HPr-like CJO35_18505 IPR003802 Sporulation regulator WhiA CJO35_18505 IPR039518 WhiA, LAGLIDADG-like domain CJO35_18505 IPR027434 Homing endonuclease CJO35_18505 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CJO35_18505 IPR023054 Sporulation regulator WhiA, C-terminal CJO35_18505 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_18510 IPR010119 Gluconeogenesis factor CJO35_18510 IPR038136 Gluconeogenesis factor superfamily CJO35_18510 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CJO35_18515 IPR005337 RapZ-like family CJO35_18515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18520 IPR020476 NUDIX hydrolase CJO35_18520 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_18520 IPR000086 NUDIX hydrolase domain CJO35_18530 IPR005982 Thioredoxin reductase CJO35_18530 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CJO35_18530 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_18530 IPR023753 FAD/NAD(P)-binding domain CJO35_18535 IPR013026 Tetratricopeptide repeat-containing domain CJO35_18535 IPR011990 Tetratricopeptide-like helical domain superfamily CJO35_18535 IPR019734 Tetratricopeptide repeat CJO35_18540 IPR016181 Acyl-CoA N-acyltransferase CJO35_18540 IPR000182 GNAT domain CJO35_18545 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CJO35_18545 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CJO35_18545 IPR026660 Phosphoribosyl-AMP cyclohydrolase CJO35_18545 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CJO35_18545 IPR023019 Histidine biosynthesis bifunctional protein HisIE CJO35_18545 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CJO35_18550 IPR006062 Histidine biosynthesis CJO35_18550 IPR004651 Histidine biosynthesis, HisF CJO35_18550 IPR013785 Aldolase-type TIM barrel CJO35_18550 IPR011060 Ribulose-phosphate binding barrel CJO35_18555 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CJO35_18555 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CJO35_18555 IPR006062 Histidine biosynthesis CJO35_18555 IPR013785 Aldolase-type TIM barrel CJO35_18555 IPR011060 Ribulose-phosphate binding barrel CJO35_18560 IPR010139 Imidazole glycerol phosphate synthase, subunit H CJO35_18560 IPR017926 Glutamine amidotransferase CJO35_18560 IPR029062 Class I glutamine amidotransferase-like CJO35_18565 IPR000807 Imidazoleglycerol-phosphate dehydratase CJO35_18565 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CJO35_18565 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_18565 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CJO35_18570 IPR022695 Histidinol dehydrogenase, monofunctional CJO35_18570 IPR012131 Histidinol dehydrogenase CJO35_18570 IPR001692 Histidinol dehydrogenase, conserved site CJO35_18570 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_18575 IPR013820 ATP phosphoribosyltransferase, catalytic domain CJO35_18575 IPR018198 ATP phosphoribosyltransferase, conserved site CJO35_18575 IPR001348 ATP phosphoribosyltransferase HisG CJO35_18575 IPR024893 ATP phosphoribosyltransferase HisG, short form CJO35_18580 IPR006195 Aminoacyl-tRNA synthetase, class II CJO35_18580 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CJO35_18580 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CJO35_18580 IPR004517 ATP phosphoribosyltransferase regulatory subunit CJO35_18585 IPR016997 Uncharacterised conserved protein UCP032442 CJO35_18585 IPR039564 Peptidase C39-like CJO35_18585 IPR039563 Peptidase C39 single domain protein CJO35_18590 IPR004898 Pectate lyase PlyH/PlyE-like CJO35_18590 IPR012334 Pectin lyase fold CJO35_18590 IPR011050 Pectin lyase fold/virulence factor CJO35_18595 IPR011004 Trimeric LpxA-like superfamily CJO35_18595 IPR001451 Hexapeptide repeat CJO35_18600 IPR006439 HAD hydrolase, subfamily IA CJO35_18600 IPR041492 Haloacid dehalogenase-like hydrolase CJO35_18600 IPR023733 Pyrophosphatase PpaX CJO35_18600 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CJO35_18600 IPR023214 HAD superfamily CJO35_18600 IPR036412 HAD-like superfamily CJO35_18605 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CJO35_18610 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CJO35_18615 IPR003755 HPr(Ser) kinase/phosphorylase CJO35_18615 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CJO35_18615 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CJO35_18615 IPR011104 HPr kinase/phosphorylase, C-terminal CJO35_18620 IPR000835 MarR-type HTH domain CJO35_18620 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_18620 IPR036390 Winged helix DNA-binding domain superfamily CJO35_18620 IPR011991 ArsR-like helix-turn-helix domain CJO35_18625 IPR011701 Major facilitator superfamily CJO35_18625 IPR036259 MFS transporter superfamily CJO35_18625 IPR020846 Major facilitator superfamily domain CJO35_18630 IPR011401 Phosphoesterase, YvnB CJO35_18630 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CJO35_18630 IPR001322 Lamin tail domain CJO35_18630 IPR036415 Lamin tail domain superfamily CJO35_18630 IPR029052 Metallo-dependent phosphatase-like CJO35_18635 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV CJO35_18640 IPR007168 Phage shock protein, PspC, N-terminal CJO35_18645 IPR016599 Uncharacterised conserved protein UCP012569 CJO35_18645 IPR025164 Putative adhesin CJO35_18660 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_18660 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_18660 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_18670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18670 IPR003439 ABC transporter-like CJO35_18670 IPR017871 ABC transporter, conserved site CJO35_18670 IPR004602 UvrABC system subunit A CJO35_18670 IPR041552 UvrA DNA-binding domain CJO35_18670 IPR041102 UvrA, interaction domain CJO35_18670 IPR003593 AAA+ ATPase domain CJO35_18675 IPR024759 UvrB, YAD/RRR-motif-containing domain CJO35_18675 IPR006935 Helicase/UvrB, N-terminal CJO35_18675 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_18675 IPR001650 Helicase, C-terminal CJO35_18675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18675 IPR001943 UVR domain CJO35_18675 IPR036876 UVR domain superfamily CJO35_18675 IPR004807 UvrABC system, subunit B CJO35_18675 IPR041471 UvrB, interaction domain CJO35_18680 IPR019242 Protein of unknown function DUF2198 CJO35_18690 IPR036034 PDZ superfamily CJO35_18690 IPR041489 PDZ domain 6 CJO35_18690 IPR001478 PDZ domain CJO35_18695 IPR035388 Swarming motility protein SwrA CJO35_18700 IPR005151 Tail specific protease CJO35_18700 IPR036366 PGBD superfamily CJO35_18700 IPR036034 PDZ superfamily CJO35_18700 IPR036365 PGBD-like superfamily CJO35_18700 IPR041489 PDZ domain 6 CJO35_18700 IPR002477 Peptidoglycan binding-like CJO35_18700 IPR004447 C-terminal-processing peptidase S41A CJO35_18700 IPR001478 PDZ domain CJO35_18700 IPR029045 ClpP/crotonase-like domain superfamily CJO35_18705 IPR024084 Isopropylmalate dehydrogenase-like domain CJO35_18705 IPR011829 Tartrate dehydrogenase CJO35_18705 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CJO35_18710 IPR038765 Papain-like cysteine peptidase superfamily CJO35_18710 IPR000064 Endopeptidase, NLPC/P60 domain CJO35_18715 IPR004513 Cell division protein FtsX CJO35_18715 IPR003838 ABC transporter permease protein domain CJO35_18715 IPR040690 FtsX, extracellular domain CJO35_18720 IPR017871 ABC transporter, conserved site CJO35_18720 IPR005286 Cell division protein FtsE, ATP-binding CJO35_18720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18720 IPR003593 AAA+ ATPase domain CJO35_18720 IPR003439 ABC transporter-like CJO35_18730 IPR012218 Cytochrome c, Bacillus subtilis c550-related CJO35_18730 IPR036909 Cytochrome c-like domain superfamily CJO35_18730 IPR009056 Cytochrome c-like domain CJO35_18735 IPR003740 Uncharacterised membrane protein YitT CJO35_18735 IPR019264 Domain of unknown function DUF2179 CJO35_18735 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_18745 IPR036670 SecA, preprotein cross-linking domain superfamily CJO35_18745 IPR036266 SecA, Wing/Scaffold superfamily CJO35_18745 IPR011116 SecA Wing/Scaffold CJO35_18745 IPR020937 SecA conserved site CJO35_18745 IPR004027 SEC-C motif CJO35_18745 IPR000185 Protein translocase subunit SecA CJO35_18745 IPR011115 SecA DEAD-like, N-terminal CJO35_18745 IPR014018 SecA motor DEAD CJO35_18745 IPR011130 SecA, preprotein cross-linking domain CJO35_18745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18750 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CJO35_18750 IPR036567 Ribosome hibernation promotion factor-like CJO35_18750 IPR003489 Ribosome hibernation promoting factor/RaiA CJO35_18750 IPR034694 Ribosome hibernation promoting factor, long/plastid CJO35_18750 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily CJO35_18765 IPR003713 Flagellar protein FliS CJO35_18765 IPR036584 Flagellar protein FliS superfamily CJO35_18770 IPR003481 Flagellar hook-associated protein 2, N-terminal CJO35_18770 IPR010810 Flagellin hook, IN motif CJO35_18770 IPR040026 Flagellar hook-associated protein 2 CJO35_18770 IPR010809 Flagellar hook-associated protein 2, C-terminal CJO35_18775 IPR005186 FlaG protein CJO35_18775 IPR035924 FlaG-like superfamily CJO35_18785 IPR042187 Flagellin, C-terminal domain, subdomain 2 CJO35_18785 IPR001029 Flagellin, D0/D1 domain CJO35_18785 IPR001492 Flagellin CJO35_18790 IPR036107 Carbon storage regulator superfamily CJO35_18790 IPR003751 Translational regulator CsrA CJO35_18795 IPR024046 Flagellar assembly factor FliW domain superfamily CJO35_18795 IPR003775 Flagellar assembly factor FliW CJO35_18805 IPR001029 Flagellin, D0/D1 domain CJO35_18805 IPR013384 Flagellar hook-associated protein 3 CJO35_18810 IPR019776 Flagellar basal body rod protein, conserved site CJO35_18810 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJO35_18810 IPR002371 Flagellar hook-associated protein 1 CJO35_18810 IPR001444 Flagellar basal body rod protein, N-terminal CJO35_18815 IPR007809 FlgN-like protein CJO35_18815 IPR036679 FlgN-like superfamily CJO35_18820 IPR007412 Anti-sigma-28 factor, FlgM CJO35_18820 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CJO35_18820 IPR035890 Anti-sigma-28 factor FlgM superfamily CJO35_18825 IPR022258 Flagellar operon protein YvyF CJO35_18830 IPR029057 Phosphoribosyltransferase-like CJO35_18830 IPR005222 Competence protein ComF CJO35_18830 IPR000836 Phosphoribosyltransferase domain CJO35_18835 IPR019657 Late competence development protein ComFB CJO35_18840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18840 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_18840 IPR001650 Helicase, C-terminal CJO35_18840 IPR006935 Helicase/UvrB, N-terminal CJO35_18845 IPR003797 DegV CJO35_18850 IPR000792 Transcription regulator LuxR, C-terminal CJO35_18850 IPR001789 Signal transduction response regulator, receiver domain CJO35_18850 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_18850 IPR011006 CheY-like superfamily CJO35_18855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_18855 IPR016381 Signal transduction histidine kinase, DegS CJO35_18855 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_18855 IPR008595 Sensor DegS CJO35_18855 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_18855 IPR005467 Histidine kinase domain CJO35_18860 IPR023582 Impact family CJO35_18860 IPR035647 EF-G domain III/V-like CJO35_18860 IPR015796 Impact family, bacterial/archaeal CJO35_18860 IPR001498 Impact, N-terminal CJO35_18860 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CJO35_18860 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_18860 IPR036956 Impact, N-terminal domain superfamily CJO35_18860 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CJO35_18865 IPR004474 Cell envelope-related transcriptional attenuator domain CJO35_18875 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CJO35_18875 IPR000715 Glycosyl transferase, family 4 CJO35_18885 IPR001173 Glycosyltransferase 2-like CJO35_18885 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_18890 IPR003856 Polysaccharide chain length determinant N-terminal domain CJO35_18895 IPR007016 O-antigen ligase-related CJO35_18900 IPR036291 NAD(P)-binding domain superfamily CJO35_18900 IPR016040 NAD(P)-binding domain CJO35_18905 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CJO35_18905 IPR036291 NAD(P)-binding domain superfamily CJO35_18905 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CJO35_18905 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CJO35_18905 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CJO35_18905 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CJO35_18905 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CJO35_18905 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_18910 IPR001296 Glycosyl transferase, family 1 CJO35_18910 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CJO35_18915 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CJO35_18915 IPR002797 Polysaccharide biosynthesis protein CJO35_18920 IPR003362 Bacterial sugar transferase CJO35_18925 IPR007253 Putative cell wall binding repeat 2 CJO35_18925 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CJO35_18930 IPR013486 Sporulation stage II protein D, amidase enhancer LytB CJO35_18930 IPR007253 Putative cell wall binding repeat 2 CJO35_18930 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CJO35_18940 IPR004474 Cell envelope-related transcriptional attenuator domain CJO35_18940 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU CJO35_18945 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CJO35_18945 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CJO35_18950 IPR005835 Nucleotidyl transferase domain CJO35_18950 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CJO35_18950 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_18955 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_18955 IPR003593 AAA+ ATPase domain CJO35_18955 IPR015860 ABC transporter, teichoic acids export, TagH CJO35_18955 IPR003439 ABC transporter-like CJO35_18955 IPR017871 ABC transporter, conserved site CJO35_18960 IPR000412 ABC-2 transporter CJO35_18960 IPR013525 ABC-2 type transporter CJO35_18965 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_18965 IPR001173 Glycosyltransferase 2-like CJO35_18965 IPR007554 CDP-glycerol glycerophosphotransferase CJO35_18970 IPR007554 CDP-glycerol glycerophosphotransferase CJO35_18975 IPR006409 Glycerol-3-phosphate cytidylyltransferase CJO35_18975 IPR004821 Cytidyltransferase-like domain CJO35_18975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_18980 IPR004629 Glycosyl transferase WecB/TagA/CpsF CJO35_18980 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase CJO35_18985 IPR007554 CDP-glycerol glycerophosphotransferase CJO35_18995 IPR014710 RmlC-like jelly roll fold CJO35_18995 IPR011051 RmlC-like cupin domain superfamily CJO35_18995 IPR001250 Mannose-6-phosphate isomerase, type I CJO35_18995 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form CJO35_19000 IPR034457 Organic radical-activating enzymes CJO35_19000 IPR013785 Aldolase-type TIM barrel CJO35_19000 IPR001989 Radical-activating enzyme, conserved site CJO35_19000 IPR012838 Pyruvate formate-lyase 1 activating enzyme CJO35_19000 IPR007197 Radical SAM CJO35_19000 IPR034465 Pyruvate formate-lyase activase CJO35_19005 IPR001150 Glycine radical domain CJO35_19005 IPR005144 ATP-cone domain CJO35_19005 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CJO35_19005 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CJO35_19010 IPR004684 2-keto-3-deoxygluconate permease CJO35_19010 IPR018395 2-keto-3-deoxygluconate permease, subgroup CJO35_19015 IPR031338 KDPG/KHG aldolase, active site 2 CJO35_19015 IPR013785 Aldolase-type TIM barrel CJO35_19015 IPR000887 KDPG/KHG aldolase CJO35_19020 IPR011611 Carbohydrate kinase PfkB CJO35_19020 IPR029056 Ribokinase-like CJO35_19020 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CJO35_19025 IPR000843 LacI-type HTH domain CJO35_19025 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_19025 IPR028082 Periplasmic binding protein-like I CJO35_19025 IPR012310 DNA ligase, ATP-dependent, central CJO35_19030 IPR007045 5-keto 4-deoxyuronate isomerase CJO35_19030 IPR021120 KduI/IolB isomerase CJO35_19030 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal CJO35_19030 IPR014710 RmlC-like jelly roll fold CJO35_19030 IPR011051 RmlC-like cupin domain superfamily CJO35_19035 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_19035 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_19035 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CJO35_19035 IPR036291 NAD(P)-binding domain superfamily CJO35_19040 IPR027399 Alcohol dehydrogenase GroES-associated CJO35_19040 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CJO35_19040 IPR013154 Alcohol dehydrogenase, N-terminal CJO35_19040 IPR036291 NAD(P)-binding domain superfamily CJO35_19040 IPR013149 Alcohol dehydrogenase, C-terminal CJO35_19040 IPR011032 GroES-like superfamily CJO35_19045 IPR036259 MFS transporter superfamily CJO35_19045 IPR003663 Sugar/inositol transporter CJO35_19045 IPR005828 Major facilitator, sugar transporter-like CJO35_19045 IPR020846 Major facilitator superfamily domain CJO35_19045 IPR005829 Sugar transporter, conserved site CJO35_19050 IPR004474 Cell envelope-related transcriptional attenuator domain CJO35_19055 IPR036412 HAD-like superfamily CJO35_19055 IPR023214 HAD superfamily CJO35_19055 IPR000150 Cof family CJO35_19055 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_19060 IPR038765 Papain-like cysteine peptidase superfamily CJO35_19060 IPR000064 Endopeptidase, NLPC/P60 domain CJO35_19070 IPR029052 Metallo-dependent phosphatase-like CJO35_19070 IPR019079 Capsule synthesis protein, CapA CJO35_19075 IPR008338 Capsule biosynthesis protein CapC CJO35_19080 IPR036565 Mur-like, catalytic domain superfamily CJO35_19080 IPR013221 Mur ligase, central CJO35_19080 IPR008337 Capsule biosynthesis protein CapB CJO35_19085 IPR000843 LacI-type HTH domain CJO35_19085 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_19085 IPR028082 Periplasmic binding protein-like I CJO35_19090 IPR011611 Carbohydrate kinase PfkB CJO35_19090 IPR002139 Ribokinase/fructokinase CJO35_19090 IPR029056 Ribokinase-like CJO35_19090 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CJO35_19090 IPR011877 Ribokinase CJO35_19095 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CJO35_19095 IPR023064 D-ribose pyranase CJO35_19095 IPR023750 RbsD-like superfamily CJO35_19100 IPR015861 ABC transporter, ribose import, RbsA CJO35_19100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19100 IPR003439 ABC transporter-like CJO35_19100 IPR003593 AAA+ ATPase domain CJO35_19100 IPR017871 ABC transporter, conserved site CJO35_19105 IPR001851 ABC transporter, permease CJO35_19110 IPR028082 Periplasmic binding protein-like I CJO35_19110 IPR025997 Periplasmic binding protein CJO35_19120 IPR005128 Alpha-acetolactate decarboxylase CJO35_19125 IPR029061 Thiamin diphosphate-binding fold CJO35_19125 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CJO35_19125 IPR000399 TPP-binding enzyme, conserved site CJO35_19125 IPR012782 Acetolactate synthase, catabolic CJO35_19125 IPR029035 DHS-like NAD/FAD-binding domain superfamily CJO35_19125 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CJO35_19125 IPR012000 Thiamine pyrophosphate enzyme, central domain CJO35_19130 IPR036390 Winged helix DNA-binding domain superfamily CJO35_19130 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_19130 IPR000847 Transcription regulator HTH, LysR CJO35_19130 IPR005119 LysR, substrate-binding CJO35_19130 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain CJO35_19135 IPR000101 Gamma-glutamyltranspeptidase CJO35_19135 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_19140 IPR011991 ArsR-like helix-turn-helix domain CJO35_19140 IPR036390 Winged helix DNA-binding domain superfamily CJO35_19140 IPR011008 Dimeric alpha-beta barrel CJO35_19140 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_19140 IPR019888 Transcription regulator AsnC-type CJO35_19140 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJO35_19140 IPR000485 AsnC-type HTH domain CJO35_19145 IPR003370 Chromate transporter CJO35_19150 IPR003370 Chromate transporter CJO35_19155 IPR016195 Polymerase/histidinol phosphatase-like CJO35_19155 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC CJO35_19160 IPR032807 Tyrosine kinase, G-rich domain CJO35_19160 IPR003856 Polysaccharide chain length determinant N-terminal domain CJO35_19170 IPR007527 Zinc finger, SWIM-type CJO35_19175 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_19175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19175 IPR022138 Helicase SWF/SNF-related CJO35_19175 IPR001650 Helicase, C-terminal CJO35_19175 IPR038718 SNF2-like, N-terminal domain superfamily CJO35_19175 IPR000330 SNF2-related, N-terminal domain CJO35_19180 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_19180 IPR023214 HAD superfamily CJO35_19180 IPR036412 HAD-like superfamily CJO35_19180 IPR000150 Cof family CJO35_19185 IPR014036 DeoR C-terminal sensor domain CJO35_19185 IPR001034 DeoR-type HTH domain CJO35_19185 IPR037171 NagB/RpiA transferase-like CJO35_19185 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CJO35_19185 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_19185 IPR036390 Winged helix DNA-binding domain superfamily CJO35_19190 IPR013785 Aldolase-type TIM barrel CJO35_19190 IPR023001 Fructose-6-phosphate aldolase CJO35_19190 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CJO35_19190 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase CJO35_19190 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial CJO35_19190 IPR018225 Transaldolase, active site CJO35_19195 IPR036291 NAD(P)-binding domain superfamily CJO35_19195 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_19195 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_19200 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component CJO35_19200 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily CJO35_19200 IPR018454 Phosphotransferase system, glucitol/sorbitol-specific IIA component, subgroup CJO35_19205 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal CJO35_19205 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal CJO35_19205 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II CJO35_19210 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor CJO35_19220 IPR007324 Sugar-binding domain, putative CJO35_19220 IPR011991 ArsR-like helix-turn-helix domain CJO35_19220 IPR025246 Transposase IS30-like HTH domain CJO35_19220 IPR037171 NagB/RpiA transferase-like CJO35_19220 IPR009057 Homeobox-like domain superfamily CJO35_19225 IPR000424 Primosome PriB/single-strand DNA-binding CJO35_19225 IPR011344 Single-stranded DNA-binding protein CJO35_19225 IPR012340 Nucleic acid-binding, OB-fold CJO35_19235 IPR025573 YwpF-like protein CJO35_19240 IPR019823 Large-conductance mechanosensitive channel, conserved site CJO35_19240 IPR001185 Large-conductance mechanosensitive channel CJO35_19240 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CJO35_19240 IPR036019 Gated mechanosensitive channel CJO35_19245 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CJO35_19245 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CJO35_19245 IPR029069 HotDog domain superfamily CJO35_19250 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CJO35_19250 IPR001444 Flagellar basal body rod protein, N-terminal CJO35_19250 IPR019776 Flagellar basal body rod protein, conserved site CJO35_19250 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CJO35_19250 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJO35_19255 IPR019776 Flagellar basal body rod protein, conserved site CJO35_19255 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJO35_19255 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CJO35_19255 IPR001444 Flagellar basal body rod protein, N-terminal CJO35_19260 IPR004753 Cell shape determining protein MreB CJO35_19265 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CJO35_19265 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CJO35_19275 IPR000835 MarR-type HTH domain CJO35_19275 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_19275 IPR036390 Winged helix DNA-binding domain superfamily CJO35_19280 IPR020846 Major facilitator superfamily domain CJO35_19280 IPR011701 Major facilitator superfamily CJO35_19280 IPR036259 MFS transporter superfamily CJO35_19285 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CJO35_19285 IPR033879 Undecaprenyl-diphosphatase CJO35_19285 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJO35_19290 IPR038763 DHH phosphoesterase superfamily CJO35_19290 IPR004097 DHHA2 domain CJO35_19290 IPR038222 DHHA2 domain superfamily CJO35_19290 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable CJO35_19290 IPR001667 DDH domain CJO35_19295 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain CJO35_19295 IPR009078 Ferritin-like superfamily CJO35_19295 IPR027407 Manganese catalase, C-terminal CJO35_19295 IPR012347 Ferritin-like CJO35_19295 IPR007760 Manganese catalase CJO35_19300 IPR023375 Acetoacetate decarboxylase domain superfamily CJO35_19300 IPR018644 Protein of unknown function DUF2071 CJO35_19305 IPR000644 CBS domain CJO35_19310 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CJO35_19315 IPR005170 Transporter-associated domain CJO35_19315 IPR016169 FAD-binding, type PCMH, subdomain 2 CJO35_19315 IPR036318 FAD-binding, type PCMH-like superfamily CJO35_19315 IPR002550 CNNM, transmembrane domain CJO35_19315 IPR000644 CBS domain CJO35_19320 IPR029020 Ammonium/urea transporter CJO35_19320 IPR001905 Ammonium transporter CJO35_19320 IPR018047 Ammonium transporter, conserved site CJO35_19320 IPR024041 Ammonium transporter AmtB-like domain CJO35_19325 IPR002187 Nitrogen regulatory protein PII CJO35_19325 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_19325 IPR017918 Nitrogen regulatory protein PII, conserved site CJO35_19325 IPR011322 Nitrogen regulatory PII-like, alpha/beta CJO35_19330 IPR001907 ATP-dependent Clp protease proteolytic subunit CJO35_19330 IPR018215 ClpP, Ser active site CJO35_19330 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJO35_19330 IPR029045 ClpP/crotonase-like domain superfamily CJO35_19335 IPR032710 NTF2-like domain superfamily CJO35_19335 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CJO35_19335 IPR039425 RNA polymerase sigma-70 like CJO35_19335 IPR007627 RNA polymerase sigma-70 region 2 CJO35_19335 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_19335 IPR013325 RNA polymerase sigma factor, region 2 CJO35_19335 IPR014305 RNA polymerase sigma-G type, actinobacteria CJO35_19335 IPR037401 SnoaL-like domain CJO35_19335 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_19335 IPR014284 RNA polymerase sigma-70 like domain CJO35_19335 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_19340 IPR016047 Peptidase M23 CJO35_19340 IPR011055 Duplicated hybrid motif CJO35_19345 IPR000182 GNAT domain CJO35_19345 IPR016181 Acyl-CoA N-acyltransferase CJO35_19350 IPR020205 Uncharacterised protein family, YwnF, transmembrane CJO35_19355 IPR027379 Cardiolipin synthase N-terminal CJO35_19355 IPR025202 Phospholipase D-like domain CJO35_19355 IPR022924 Cardiolipin synthase CJO35_19355 IPR030874 Cardiolipin synthase, Firmicutes-type CJO35_19355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_19355 IPR001736 Phospholipase D/Transphosphatidylase CJO35_19365 IPR011701 Major facilitator superfamily CJO35_19365 IPR036259 MFS transporter superfamily CJO35_19365 IPR004638 Drug resistance transporter EmrB-like CJO35_19365 IPR020846 Major facilitator superfamily domain CJO35_19375 IPR010071 Amino acid adenylation domain CJO35_19375 IPR029058 Alpha/Beta hydrolase fold CJO35_19375 IPR036736 ACP-like superfamily CJO35_19375 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_19375 IPR020845 AMP-binding, conserved site CJO35_19375 IPR000873 AMP-dependent synthetase/ligase CJO35_19375 IPR001031 Thioesterase CJO35_19375 IPR009081 Phosphopantetheine binding ACP domain CJO35_19375 IPR020802 Polyketide synthase, thioesterase domain CJO35_19375 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CJO35_19375 IPR001242 Condensation domain CJO35_19375 IPR042099 AMP-dependent synthetase-like superfamily CJO35_19375 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CJO35_19380 IPR009081 Phosphopantetheine binding ACP domain CJO35_19380 IPR036380 Isochorismatase-like superfamily CJO35_19380 IPR000868 Isochorismatase-like CJO35_19380 IPR016291 Isochorismatase CJO35_19380 IPR036736 ACP-like superfamily CJO35_19385 IPR011963 2,3-dihydroxybenzoate-AMP ligase CJO35_19385 IPR000873 AMP-dependent synthetase/ligase CJO35_19385 IPR020845 AMP-binding, conserved site CJO35_19385 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_19390 IPR005801 ADC synthase CJO35_19390 IPR004561 Isochorismate synthase CJO35_19390 IPR015890 Chorismate-utilising enzyme, C-terminal CJO35_19395 IPR036291 NAD(P)-binding domain superfamily CJO35_19395 IPR020904 Short-chain dehydrogenase/reductase, conserved site CJO35_19395 IPR002347 Short-chain dehydrogenase/reductase SDR CJO35_19395 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase CJO35_19400 IPR029058 Alpha/Beta hydrolase fold CJO35_19400 IPR000801 Putative esterase CJO35_19405 IPR037294 ABC transporter, BtuC-like CJO35_19405 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_19410 IPR000522 ABC transporter, permease protein, BtuC-like CJO35_19410 IPR037294 ABC transporter, BtuC-like CJO35_19415 IPR002491 ABC transporter periplasmic binding domain CJO35_19420 IPR020449 Transcription regulator HTH, AraC- type CJO35_19420 IPR018062 HTH domain AraC-type, conserved site CJO35_19420 IPR018060 DNA binding HTH domain, AraC-type CJO35_19420 IPR009057 Homeobox-like domain superfamily CJO35_19420 IPR002491 ABC transporter periplasmic binding domain CJO35_19425 IPR035287 Protein of unknown function DUF5362 CJO35_19430 IPR036291 NAD(P)-binding domain superfamily CJO35_19430 IPR016040 NAD(P)-binding domain CJO35_19435 IPR000944 Transcription regulator Rrf2-type CJO35_19435 IPR036390 Winged helix DNA-binding domain superfamily CJO35_19435 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_19445 IPR013785 Aldolase-type TIM barrel CJO35_19445 IPR006638 Elp3/MiaB/NifB CJO35_19445 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CJO35_19445 IPR010505 Molybdenum cofactor synthesis C-terminal CJO35_19445 IPR013483 Molybdenum cofactor biosynthesis protein A CJO35_19445 IPR007197 Radical SAM CJO35_19450 IPR016193 Cytidine deaminase-like CJO35_19450 IPR003786 Sulfur carrier protein FdhD CJO35_19455 IPR004741 Oxalate/formate antiporter family transporter CJO35_19455 IPR026355 Oxalate/formate antiporter CJO35_19455 IPR020846 Major facilitator superfamily domain CJO35_19455 IPR036259 MFS transporter superfamily CJO35_19455 IPR011701 Major facilitator superfamily CJO35_19460 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CJO35_19460 IPR006311 Twin-arginine translocation pathway, signal sequence CJO35_19460 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CJO35_19460 IPR009010 Aspartate decarboxylase-like domain superfamily CJO35_19460 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CJO35_19460 IPR006656 Molybdopterin oxidoreductase CJO35_19460 IPR006657 Molybdopterin dinucleotide-binding domain CJO35_19460 IPR010051 Periplasmic nitrate reductase, large subunit CJO35_19460 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CJO35_19465 IPR036465 von Willebrand factor A-like domain superfamily CJO35_19465 IPR002035 von Willebrand factor, type A CJO35_19470 IPR036465 von Willebrand factor A-like domain superfamily CJO35_19470 IPR002035 von Willebrand factor, type A CJO35_19475 IPR013486 Sporulation stage II protein D, amidase enhancer LytB CJO35_19475 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CJO35_19475 IPR014225 Sporulation stage II, protein D firmicutes CJO35_19480 IPR001986 Enolpyruvate transferase domain CJO35_19480 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CJO35_19480 IPR036968 Enolpyruvate transferase domain superfamily CJO35_19480 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CJO35_19485 IPR014794 TATA-box binding CJO35_19485 IPR036209 YwmB-like superfamily CJO35_19490 IPR009526 Protein of unknown function DUF1146 CJO35_19495 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CJO35_19495 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CJO35_19495 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CJO35_19495 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CJO35_19495 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CJO35_19500 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CJO35_19500 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CJO35_19500 IPR005722 ATP synthase, F1 complex, beta subunit CJO35_19500 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CJO35_19500 IPR003593 AAA+ ATPase domain CJO35_19500 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CJO35_19500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19500 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CJO35_19505 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site CJO35_19505 IPR000131 ATP synthase, F1 complex, gamma subunit CJO35_19505 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CJO35_19510 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CJO35_19510 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CJO35_19510 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CJO35_19510 IPR000793 ATP synthase, alpha subunit, C-terminal CJO35_19510 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CJO35_19510 IPR005294 ATP synthase, F1 complex, alpha subunit CJO35_19510 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CJO35_19510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19510 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CJO35_19510 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CJO35_19515 IPR000711 ATPase, OSCP/delta subunit CJO35_19515 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CJO35_19515 IPR020781 ATPase, OSCP/delta subunit, conserved site CJO35_19520 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CJO35_19520 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CJO35_19520 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CJO35_19525 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CJO35_19525 IPR000454 ATP synthase, F0 complex, subunit C CJO35_19525 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CJO35_19525 IPR038662 F1F0 ATP synthase subunit C superfamily CJO35_19525 IPR002379 V-ATPase proteolipid subunit C-like domain CJO35_19525 IPR035921 F/V-ATP synthase subunit C superfamily CJO35_19530 IPR023011 ATP synthase, F0 complex, subunit A, active site CJO35_19530 IPR000568 ATP synthase, F0 complex, subunit A CJO35_19530 IPR035908 ATP synthase, F0 complex, subunit A superfamily CJO35_19535 IPR039072 ATP synthase protein I, Bacilli-type CJO35_19535 IPR005598 ATP synthase protein I CJO35_19545 IPR000836 Phosphoribosyltransferase domain CJO35_19545 IPR029057 Phosphoribosyltransferase-like CJO35_19545 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CJO35_19545 IPR005765 Uracil phosphoribosyl transferase CJO35_19550 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_19550 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_19550 IPR001085 Serine hydroxymethyltransferase CJO35_19550 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CJO35_19550 IPR039429 Serine hydroxymethyltransferase-like domain CJO35_19550 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_19555 IPR028345 Aminoglycoside 3-N-acetyltransferase-like CJO35_19555 IPR006340 Protein of unknown function DUF436 CJO35_19560 IPR004785 Ribose 5-phosphate isomerase B CJO35_19560 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily CJO35_19560 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CJO35_19565 IPR023485 Phosphotyrosine protein phosphatase I CJO35_19565 IPR036196 Phosphotyrosine protein phosphatase I superfamily CJO35_19565 IPR017867 Protein-tyrosine phosphatase, low molecular weight CJO35_19570 IPR003810 Putative manganese efflux pump CJO35_19570 IPR022929 Putative manganese efflux pump MntP CJO35_19575 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CJO35_19575 IPR006070 YrdC-like domain CJO35_19575 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily CJO35_19575 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CJO35_19575 IPR005145 Putative GTP-binding controlling metal-binding domain CJO35_19580 IPR016181 Acyl-CoA N-acyltransferase CJO35_19585 IPR014202 Sporulation stage II, protein R CJO35_19590 IPR011701 Major facilitator superfamily CJO35_19590 IPR036259 MFS transporter superfamily CJO35_19590 IPR020846 Major facilitator superfamily domain CJO35_19595 IPR004104 Oxidoreductase, C-terminal CJO35_19595 IPR036291 NAD(P)-binding domain superfamily CJO35_19595 IPR000683 Oxidoreductase, N-terminal CJO35_19600 IPR006380 Sucrose-phosphatase-like, N-terminal CJO35_19600 IPR023214 HAD superfamily CJO35_19600 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_19600 IPR036412 HAD-like superfamily CJO35_19605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CJO35_19605 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_19605 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CJO35_19605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_19610 IPR000843 LacI-type HTH domain CJO35_19610 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_19610 IPR028082 Periplasmic binding protein-like I CJO35_19615 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CJO35_19615 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CJO35_19615 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CJO35_19615 IPR004556 Methyltransferase HemK-like CJO35_19615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_19615 IPR007848 Methyltransferase small domain CJO35_19620 IPR005139 Peptide chain release factor CJO35_19620 IPR000352 Peptide chain release factor class I CJO35_19620 IPR004373 Peptide chain release factor 1 CJO35_19625 IPR037478 YwkD-like domain CJO35_19625 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_19625 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_19625 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_19630 IPR009061 Putative DNA-binding domain superfamily CJO35_19630 IPR023522 Chromosome-anchoring protein RacA CJO35_19630 IPR000551 MerR-type HTH domain CJO35_19635 IPR004776 Membrane transport protein CJO35_19635 IPR014024 Auxin efflux carrier, plant type CJO35_19640 IPR012301 Malic enzyme, N-terminal domain CJO35_19640 IPR015884 Malic enzyme, conserved site CJO35_19640 IPR012302 Malic enzyme, NAD-binding CJO35_19640 IPR001891 Malic oxidoreductase CJO35_19640 IPR036291 NAD(P)-binding domain superfamily CJO35_19640 IPR037062 Malic enzyme, N-terminal domain superfamily CJO35_19645 IPR020633 Thymidine kinase, conserved site CJO35_19645 IPR001267 Thymidine kinase CJO35_19645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19650 IPR002150 Ribosomal protein L31 CJO35_19650 IPR034704 L28p-like CJO35_19650 IPR042105 Ribosomal protein L31 superfamily CJO35_19650 IPR027491 Ribosomal protein L31 type A CJO35_19655 IPR036269 Rho termination factor, N-terminal domain superfamily CJO35_19655 IPR004665 Transcription termination factor Rho CJO35_19655 IPR011113 Rho termination factor, RNA-binding domain CJO35_19655 IPR011112 Rho termination factor, N-terminal CJO35_19655 IPR041703 Transcription termination factor Rho, ATP binding domain CJO35_19655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19655 IPR012340 Nucleic acid-binding, OB-fold CJO35_19655 IPR011129 Cold shock domain CJO35_19655 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CJO35_19655 IPR003593 AAA+ ATPase domain CJO35_19660 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CJO35_19665 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CJO35_19665 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CJO35_19665 IPR036968 Enolpyruvate transferase domain superfamily CJO35_19665 IPR001986 Enolpyruvate transferase domain CJO35_19670 IPR018225 Transaldolase, active site CJO35_19670 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CJO35_19670 IPR022999 Transaldolase type 3B, putative CJO35_19670 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase CJO35_19670 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial CJO35_19670 IPR013785 Aldolase-type TIM barrel CJO35_19675 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 CJO35_19675 IPR013785 Aldolase-type TIM barrel CJO35_19675 IPR000771 Fructose-bisphosphate aldolase, class-II CJO35_19680 IPR011006 CheY-like superfamily CJO35_19680 IPR001789 Signal transduction response regulator, receiver domain CJO35_19685 IPR019676 Domain of unknown function (DUF2529) CJO35_19690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19690 IPR033828 CTP synthase GATase domain CJO35_19690 IPR017926 Glutamine amidotransferase CJO35_19690 IPR017456 CTP synthase, N-terminal CJO35_19690 IPR004468 CTP synthase CJO35_19690 IPR029062 Class I glutamine amidotransferase-like CJO35_19695 IPR029757 DNA-directed RNA polymerase subunit delta CJO35_19695 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily CJO35_19695 IPR007759 HB1/Asxl, restriction endonuclease HTH domain CJO35_19700 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CJO35_19700 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CJO35_19700 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CJO35_19700 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CJO35_19700 IPR006089 Acyl-CoA dehydrogenase, conserved site CJO35_19700 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CJO35_19700 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CJO35_19705 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CJO35_19705 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CJO35_19705 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CJO35_19705 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CJO35_19705 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CJO35_19705 IPR006089 Acyl-CoA dehydrogenase, conserved site CJO35_19705 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CJO35_19710 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CJO35_19710 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CJO35_19710 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_19710 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_19710 IPR036291 NAD(P)-binding domain superfamily CJO35_19710 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CJO35_19710 IPR022694 3-hydroxyacyl-CoA dehydrogenase CJO35_19715 IPR020613 Thiolase, conserved site CJO35_19715 IPR020617 Thiolase, C-terminal CJO35_19715 IPR020616 Thiolase, N-terminal CJO35_19715 IPR020610 Thiolase, active site CJO35_19715 IPR002155 Thiolase CJO35_19715 IPR016039 Thiolase-like CJO35_19715 IPR020615 Thiolase, acyl-enzyme intermediate active site CJO35_19720 IPR009051 Alpha-helical ferredoxin CJO35_19720 IPR004017 Cysteine-rich domain CJO35_19720 IPR036197 NarG-like superfamily CJO35_19720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJO35_19720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJO35_19725 IPR001736 Phospholipase D/Transphosphatidylase CJO35_19725 IPR022924 Cardiolipin synthase CJO35_19725 IPR025202 Phospholipase D-like domain CJO35_19735 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CJO35_19735 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CJO35_19735 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CJO35_19735 IPR005148 Arginyl tRNA synthetase N-terminal domain CJO35_19735 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CJO35_19735 IPR008909 DALR anticodon binding CJO35_19735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_19735 IPR001278 Arginine-tRNA ligase CJO35_19740 IPR015231 Protein of unknown function DUF1934 CJO35_19740 IPR012674 Calycin CJO35_19745 IPR023696 Ureohydrolase domain superfamily CJO35_19745 IPR005925 Agmatinase-related CJO35_19745 IPR006035 Ureohydrolase CJO35_19745 IPR020855 Ureohydrolase, manganese-binding site CJO35_19750 IPR037163 Spermidine synthase, tetramerisation domain superfamily CJO35_19750 IPR035246 Spermidine synthase, tetramerisation domain CJO35_19750 IPR001045 Spermidine/spermine synthases CJO35_19750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_19750 IPR030373 Polyamine biosynthesis domain, conserved site CJO35_19750 IPR030374 Polyamine biosynthesis domain CJO35_19765 IPR036950 Penicillin binding protein transglycosylase domain CJO35_19765 IPR023346 Lysozyme-like domain superfamily CJO35_19765 IPR001264 Glycosyl transferase, family 51 CJO35_19765 IPR001460 Penicillin-binding protein, transpeptidase CJO35_19765 IPR012338 Beta-lactamase/transpeptidase-like CJO35_19770 IPR014852 Uncharacterised protein YwhD CJO35_19775 IPR008915 Peptidase M50 CJO35_19780 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CJO35_19780 IPR004370 4-oxalocrotonate tautomerase CJO35_19780 IPR014347 Tautomerase/MIF superfamily CJO35_19795 IPR003607 HD/PDEase domain CJO35_19795 IPR006674 HD domain CJO35_19800 IPR020880 Protein of unknown function UPF0741 CJO35_19800 IPR009910 Protein of unknown function DUF1450 CJO35_19805 IPR014243 Transcription factor, RsfA CJO35_19805 IPR017877 Myb-like domain CJO35_19810 IPR025440 Protein of unknown function DUF4306 CJO35_19810 IPR016508 Uncharacterised conserved protein UCP007103 CJO35_19815 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CJO35_19815 IPR024897 Octanoyltransferase LipL CJO35_19820 IPR002938 FAD-binding domain CJO35_19820 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_19820 IPR012733 4-hydroxybenzoate 3-monooxygenase CJO35_19825 IPR011701 Major facilitator superfamily CJO35_19825 IPR005829 Sugar transporter, conserved site CJO35_19825 IPR036259 MFS transporter superfamily CJO35_19825 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family CJO35_19825 IPR020846 Major facilitator superfamily domain CJO35_19835 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CJO35_19835 IPR004370 4-oxalocrotonate tautomerase CJO35_19835 IPR014347 Tautomerase/MIF superfamily CJO35_19840 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CJO35_19840 IPR017630 4-oxalocrotonate decarboxylase CJO35_19845 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_19845 IPR016160 Aldehyde dehydrogenase, cysteine active site CJO35_19845 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_19845 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_19845 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CJO35_19845 IPR015590 Aldehyde dehydrogenase domain CJO35_19845 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase CJO35_19850 IPR014757 Transcription regulator IclR, C-terminal CJO35_19850 IPR036390 Winged helix DNA-binding domain superfamily CJO35_19850 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_19850 IPR005471 Transcription regulator IclR, N-terminal CJO35_19850 IPR029016 GAF-like domain superfamily CJO35_19860 IPR012147 Phosphate acetyl/butyryltransferase CJO35_19860 IPR004614 Phosphate acetyltransferase CJO35_19860 IPR042112 Phosphate acetyltransferase, domain 2 CJO35_19860 IPR002505 Phosphate acetyl/butaryl transferase CJO35_19860 IPR042113 Phosphate acetyltransferase, domain 1 CJO35_19870 IPR034650 YuaB-like CJO35_19870 IPR038480 YuaB-like superfamily CJO35_19880 IPR004772 TrkH potassium transport family CJO35_19880 IPR003445 Cation transporter CJO35_19885 IPR014099 Spore coat protein GerQ CJO35_19900 IPR003439 ABC transporter-like CJO35_19900 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_19900 IPR017871 ABC transporter, conserved site CJO35_19900 IPR003593 AAA+ ATPase domain CJO35_19910 IPR011006 CheY-like superfamily CJO35_19910 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_19910 IPR001789 Signal transduction response regulator, receiver domain CJO35_19910 IPR000792 Transcription regulator LuxR, C-terminal CJO35_19915 IPR006696 Protein of unknown function DUF423 CJO35_19920 IPR006043 Xanthine/uracil/vitamin C permease CJO35_19920 IPR006042 Xanthine/uracil permease CJO35_19925 IPR035218 Protein of unknown function DUF5327 CJO35_19930 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_19930 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CJO35_19930 IPR016160 Aldehyde dehydrogenase, cysteine active site CJO35_19930 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_19930 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CJO35_19930 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_19930 IPR015590 Aldehyde dehydrogenase domain CJO35_19935 IPR002043 Uracil-DNA glycosylase family 1 CJO35_19935 IPR018085 Uracil-DNA glycosylase, active site CJO35_19935 IPR036895 Uracil-DNA glycosylase-like domain superfamily CJO35_19935 IPR005122 Uracil-DNA glycosylase-like CJO35_19940 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_19940 IPR001173 Glycosyltransferase 2-like CJO35_19945 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CJO35_19945 IPR029056 Ribokinase-like CJO35_19945 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CJO35_19955 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_19955 IPR006232 Sucrose-6-phosphate hydrolase CJO35_19955 IPR013148 Glycosyl hydrolase family 32, N-terminal CJO35_19955 IPR013189 Glycosyl hydrolase family 32, C-terminal CJO35_19955 IPR001362 Glycoside hydrolase, family 32 CJO35_19955 IPR018053 Glycoside hydrolase, family 32, active site CJO35_19955 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_19960 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_19960 IPR010973 Phosphotransferase system, sucrose-specific IIBC component CJO35_19960 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CJO35_19960 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_19960 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_19960 IPR036878 Glucose permease domain IIB CJO35_19960 IPR003352 Phosphotransferase system, EIIC CJO35_19965 IPR001550 Transcription antiterminator, conserved site CJO35_19965 IPR036634 PRD domain superfamily CJO35_19965 IPR011608 PRD domain CJO35_19965 IPR004341 CAT RNA-binding domain CJO35_19965 IPR036650 CAT RNA-binding domain superfamily CJO35_19975 IPR034213 Vpr-like peptidase, catalytic domain CJO35_19975 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily CJO35_19975 IPR000209 Peptidase S8/S53 domain CJO35_19975 IPR025965 FlgD Ig-like domain CJO35_19975 IPR015500 Peptidase S8, subtilisin-related CJO35_19975 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_19975 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_19975 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 CJO35_19975 IPR003137 PA domain CJO35_19975 IPR023827 Peptidase S8, subtilisin, Asp-active site CJO35_19975 IPR036852 Peptidase S8/S53 domain superfamily CJO35_19985 IPR019949 Luciferase family oxidoreductase, group 1 CJO35_19985 IPR011251 Luciferase-like domain CJO35_19985 IPR036661 Luciferase-like domain superfamily CJO35_19990 IPR016446 Flavin oxidoreductase Frp family CJO35_19990 IPR029479 Nitroreductase CJO35_19990 IPR000415 Nitroreductase-like CJO35_19995 IPR011650 Peptidase M20, dimerisation domain CJO35_19995 IPR017439 Amidohydrolase CJO35_19995 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_19995 IPR002933 Peptidase M20 CJO35_20000 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CJO35_20000 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CJO35_20000 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CJO35_20005 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CJO35_20005 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CJO35_20005 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CJO35_20020 IPR020185 Spore morphogenesis/germination protein YwcE CJO35_20030 IPR016181 Acyl-CoA N-acyltransferase CJO35_20030 IPR000182 GNAT domain CJO35_20035 IPR017871 ABC transporter, conserved site CJO35_20035 IPR003439 ABC transporter-like CJO35_20035 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_20035 IPR011527 ABC transporter type 1, transmembrane domain CJO35_20035 IPR003593 AAA+ ATPase domain CJO35_20035 IPR039421 Type I protein exporter CJO35_20035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20040 IPR003439 ABC transporter-like CJO35_20040 IPR017871 ABC transporter, conserved site CJO35_20040 IPR039421 Type I protein exporter CJO35_20040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20040 IPR003593 AAA+ ATPase domain CJO35_20040 IPR011527 ABC transporter type 1, transmembrane domain CJO35_20040 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_20060 IPR001789 Signal transduction response regulator, receiver domain CJO35_20060 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_20060 IPR011006 CheY-like superfamily CJO35_20060 IPR000792 Transcription regulator LuxR, C-terminal CJO35_20065 IPR014250 Quinol oxidase subunit IV CJO35_20065 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CJO35_20070 IPR000298 Cytochrome c oxidase subunit III-like CJO35_20070 IPR033946 Ubiquinol oxidase subunit III domain CJO35_20070 IPR014246 Quinol oxidase subunit III CJO35_20070 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CJO35_20070 IPR035973 Cytochrome c oxidase subunit III-like superfamily CJO35_20070 IPR024791 Cytochrome c oxidase subunit III CJO35_20075 IPR014233 Quinol oxidase subunit I CJO35_20075 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CJO35_20075 IPR000883 Cytochrome c oxidase subunit I CJO35_20075 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CJO35_20075 IPR023616 Cytochrome c oxidase-like, subunit I domain CJO35_20080 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CJO35_20080 IPR008972 Cupredoxin CJO35_20080 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain CJO35_20080 IPR006332 Quinol oxidase subunit II CJO35_20080 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CJO35_20080 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CJO35_20080 IPR006333 Cytochrome o ubiquinol oxidase subunit II CJO35_20085 IPR005886 UDP-glucose 4-epimerase CJO35_20085 IPR036291 NAD(P)-binding domain superfamily CJO35_20085 IPR016040 NAD(P)-binding domain CJO35_20105 IPR007436 Protein of unknown function DUF485 CJO35_20110 IPR038377 Sodium/glucose symporter superfamily CJO35_20110 IPR001734 Sodium/solute symporter CJO35_20110 IPR018212 Sodium/solute symporter, conserved site CJO35_20115 IPR018483 Carbohydrate kinase, FGGY, conserved site CJO35_20115 IPR000577 Carbohydrate kinase, FGGY CJO35_20115 IPR018485 Carbohydrate kinase, FGGY, C-terminal CJO35_20115 IPR006000 Xylulokinase CJO35_20115 IPR018484 Carbohydrate kinase, FGGY, N-terminal CJO35_20120 IPR001998 Xylose isomerase CJO35_20120 IPR013452 Xylose isomerase, bacterial-type CJO35_20120 IPR013022 Xylose isomerase-like, TIM barrel domain CJO35_20120 IPR036237 Xylose isomerase-like superfamily CJO35_20125 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20125 IPR000600 ROK family CJO35_20125 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20130 IPR013785 Aldolase-type TIM barrel CJO35_20130 IPR034291 Thiamine phosphate synthase CJO35_20130 IPR022998 Thiamine phosphate synthase/TenI CJO35_20130 IPR036206 Thiamin phosphate synthase superfamily CJO35_20135 IPR000417 Hydroxyethylthiazole kinase CJO35_20135 IPR029056 Ribokinase-like CJO35_20140 IPR000847 Transcription regulator HTH, LysR CJO35_20140 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20140 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20140 IPR005119 LysR, substrate-binding CJO35_20155 IPR005538 LrgA/CidA family CJO35_20155 IPR023760 Holin-like protein CidA CJO35_20160 IPR005261 Conserved hypothetical protein CHP00659 CJO35_20160 IPR007300 CidB/LrgB family CJO35_20170 IPR011851 Sodium/proline symporter CJO35_20170 IPR038377 Sodium/glucose symporter superfamily CJO35_20170 IPR001734 Sodium/solute symporter CJO35_20170 IPR018212 Sodium/solute symporter, conserved site CJO35_20175 IPR015947 PUA-like superfamily CJO35_20175 IPR002478 PUA domain CJO35_20175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_20175 IPR019614 S-adenosylmethionine-dependent methyltransferase CJO35_20175 IPR041532 RlmI, PUA-like domain CJO35_20175 IPR036974 PUA domain superfamily CJO35_20180 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJO35_20180 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJO35_20180 IPR018146 Glyoxalase I, conserved site CJO35_20180 IPR037523 Vicinal oxygen chelate (VOC) domain CJO35_20185 IPR036291 NAD(P)-binding domain superfamily CJO35_20185 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CJO35_20185 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJO35_20185 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJO35_20190 IPR002495 Glycosyl transferase, family 8 CJO35_20190 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_20205 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_20205 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_20205 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_20210 IPR011006 CheY-like superfamily CJO35_20210 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_20210 IPR001789 Signal transduction response regulator, receiver domain CJO35_20210 IPR000792 Transcription regulator LuxR, C-terminal CJO35_20215 IPR004869 Membrane transport protein MMPL domain CJO35_20215 IPR000731 Sterol-sensing domain CJO35_20220 IPR011737 Conserved hypothetical protein CHP02206, TP0381 CJO35_20225 IPR036259 MFS transporter superfamily CJO35_20225 IPR020846 Major facilitator superfamily domain CJO35_20225 IPR011701 Major facilitator superfamily CJO35_20230 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CJO35_20230 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CJO35_20230 IPR034593 Mandelate racemase-like CJO35_20230 IPR029017 Enolase-like, N-terminal CJO35_20230 IPR036849 Enolase-like, C-terminal domain superfamily CJO35_20230 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CJO35_20230 IPR029065 Enolase C-terminal domain-like CJO35_20230 IPR023592 D-galactonate dehydratase CJO35_20235 IPR000887 KDPG/KHG aldolase CJO35_20235 IPR031337 KDPG/KHG aldolase, active site 1 CJO35_20235 IPR031338 KDPG/KHG aldolase, active site 2 CJO35_20235 IPR013785 Aldolase-type TIM barrel CJO35_20240 IPR029056 Ribokinase-like CJO35_20240 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CJO35_20240 IPR011611 Carbohydrate kinase PfkB CJO35_20245 IPR011991 ArsR-like helix-turn-helix domain CJO35_20245 IPR029016 GAF-like domain superfamily CJO35_20245 IPR014757 Transcription regulator IclR, C-terminal CJO35_20245 IPR005471 Transcription regulator IclR, N-terminal CJO35_20245 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20245 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20250 IPR007484 Peptidase M28 CJO35_20250 IPR003137 PA domain CJO35_20255 IPR036259 MFS transporter superfamily CJO35_20255 IPR011701 Major facilitator superfamily CJO35_20255 IPR020846 Major facilitator superfamily domain CJO35_20265 IPR007685 RelA/SpoT CJO35_20275 IPR021008 Protein of unknown function DUF3687 CJO35_20280 IPR042099 AMP-dependent synthetase-like superfamily CJO35_20280 IPR010072 D-alanine--D-alanyl carrier protein ligase CJO35_20280 IPR025110 AMP-binding enzyme, C-terminal domain CJO35_20280 IPR010071 Amino acid adenylation domain CJO35_20280 IPR020845 AMP-binding, conserved site CJO35_20280 IPR000873 AMP-dependent synthetase/ligase CJO35_20285 IPR004299 Membrane bound O-acyl transferase, MBOAT CJO35_20285 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CJO35_20285 IPR024024 D-alanyl transfer protein DltB CJO35_20290 IPR003230 D-alanyl carrier protein CJO35_20290 IPR009081 Phosphopantetheine binding ACP domain CJO35_20290 IPR036736 ACP-like superfamily CJO35_20295 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes CJO35_20295 IPR006998 DltD CJO35_20300 IPR001544 Aminotransferase class IV CJO35_20300 IPR005786 Branched-chain amino acid aminotransferase II CJO35_20300 IPR036038 Aminotransferase-like, PLP-dependent enzymes CJO35_20300 IPR018300 Aminotransferase, class IV, conserved site CJO35_20300 IPR033939 Branched-chain aminotransferase CJO35_20305 IPR036259 MFS transporter superfamily CJO35_20305 IPR011701 Major facilitator superfamily CJO35_20310 IPR001088 Glycoside hydrolase, family 4 CJO35_20310 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CJO35_20310 IPR036291 NAD(P)-binding domain superfamily CJO35_20310 IPR019802 Glycoside hydrolase, family 4, conserved site CJO35_20310 IPR022616 Glycosyl hydrolase, family 4, C-terminal CJO35_20315 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CJO35_20315 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CJO35_20320 IPR004796 Phosphotransferase system, cellobiose-type IIC component CJO35_20320 IPR003352 Phosphotransferase system, EIIC CJO35_20320 IPR004501 Phosphotransferase system, EIIC component, type 3 CJO35_20325 IPR036095 PTS system IIB component-like superfamily CJO35_20325 IPR013012 Phosphotransferase system, EIIB component, type 3 CJO35_20325 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CJO35_20330 IPR036634 PRD domain superfamily CJO35_20330 IPR013196 Helix-turn-helix, type 11 CJO35_20330 IPR007737 Mga helix-turn-helix domain CJO35_20330 IPR016152 Phosphotransferase/anion transporter CJO35_20330 IPR011608 PRD domain CJO35_20330 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20330 IPR002178 PTS EIIA type-2 domain CJO35_20330 IPR036095 PTS system IIB component-like superfamily CJO35_20330 IPR013011 Phosphotransferase system, EIIB component, type 2 CJO35_20330 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20335 IPR011034 Formyl transferase-like, C-terminal domain superfamily CJO35_20335 IPR036995 Methylpurine-DNA glycosylase superfamily CJO35_20335 IPR003180 Methylpurine-DNA glycosylase CJO35_20340 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_20340 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20340 IPR011711 GntR, C-terminal CJO35_20340 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20340 IPR000524 Transcription regulator HTH, GntR CJO35_20345 IPR024176 Citrate synthase, bacterial-type CJO35_20345 IPR016143 Citrate synthase-like, small alpha subdomain CJO35_20345 IPR002020 Citrate synthase CJO35_20345 IPR019810 Citrate synthase active site CJO35_20345 IPR016142 Citrate synthase-like, large alpha subdomain CJO35_20345 IPR036969 Citrate synthase superfamily CJO35_20350 IPR042188 MmgE/PrpD superfamily, domain 2 CJO35_20350 IPR036148 MmgE/PrpD superfamily CJO35_20350 IPR042183 MmgE/PrpD superfamily, domain 1 CJO35_20350 IPR005656 MmgE/PrpD CJO35_20350 IPR012705 2-methylcitrate dehydratase PrpD CJO35_20355 IPR012695 2-methylisocitrate lyase CJO35_20355 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CJO35_20355 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CJO35_20355 IPR039556 ICL/PEPM domain CJO35_20355 IPR040442 Pyruvate kinase-like domain superfamily CJO35_20370 IPR003593 AAA+ ATPase domain CJO35_20370 IPR003439 ABC transporter-like CJO35_20370 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_20370 IPR039421 Type I protein exporter CJO35_20370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20370 IPR011527 ABC transporter type 1, transmembrane domain CJO35_20370 IPR017871 ABC transporter, conserved site CJO35_20375 IPR013830 SGNH hydrolase-type esterase domain CJO35_20375 IPR037459 Rhamnogalacturonan acetylesterase RhgT-like CJO35_20375 IPR036514 SGNH hydrolase superfamily CJO35_20380 IPR034650 YuaB-like CJO35_20380 IPR038480 YuaB-like superfamily CJO35_20385 IPR038480 YuaB-like superfamily CJO35_20385 IPR034650 YuaB-like CJO35_20390 IPR036259 MFS transporter superfamily CJO35_20390 IPR020846 Major facilitator superfamily domain CJO35_20390 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CJO35_20390 IPR011701 Major facilitator superfamily CJO35_20395 IPR032688 ABC-2 family transporter protein CJO35_20400 IPR025302 Domain of unknown function DUF4162 CJO35_20400 IPR017871 ABC transporter, conserved site CJO35_20400 IPR003439 ABC transporter-like CJO35_20400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20400 IPR003593 AAA+ ATPase domain CJO35_20405 IPR027379 Cardiolipin synthase N-terminal CJO35_20420 IPR013325 RNA polymerase sigma factor, region 2 CJO35_20420 IPR007627 RNA polymerase sigma-70 region 2 CJO35_20420 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CJO35_20420 IPR014284 RNA polymerase sigma-70 like domain CJO35_20420 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20420 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_20420 IPR039425 RNA polymerase sigma-70 like CJO35_20420 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_20425 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CJO35_20425 IPR036259 MFS transporter superfamily CJO35_20425 IPR020846 Major facilitator superfamily domain CJO35_20425 IPR011701 Major facilitator superfamily CJO35_20430 IPR018028 Catalase, mono-functional, haem-containing CJO35_20430 IPR024708 Catalase active site CJO35_20430 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CJO35_20430 IPR020835 Catalase superfamily CJO35_20430 IPR037060 Catalase core domain superfamily CJO35_20430 IPR002226 Catalase haem-binding site CJO35_20430 IPR010582 Catalase immune-responsive domain CJO35_20430 IPR011614 Catalase core domain CJO35_20435 IPR020835 Catalase superfamily CJO35_20435 IPR010582 Catalase immune-responsive domain CJO35_20435 IPR002226 Catalase haem-binding site CJO35_20435 IPR011614 Catalase core domain CJO35_20435 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CJO35_20435 IPR040333 Catalase, clade 3 CJO35_20435 IPR018028 Catalase, mono-functional, haem-containing CJO35_20435 IPR037060 Catalase core domain superfamily CJO35_20435 IPR024708 Catalase active site CJO35_20440 IPR002481 Ferric-uptake regulator CJO35_20440 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20440 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20450 IPR032688 ABC-2 family transporter protein CJO35_20455 IPR003439 ABC transporter-like CJO35_20455 IPR003593 AAA+ ATPase domain CJO35_20455 IPR017871 ABC transporter, conserved site CJO35_20455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20470 IPR017871 ABC transporter, conserved site CJO35_20470 IPR003439 ABC transporter-like CJO35_20470 IPR003593 AAA+ ATPase domain CJO35_20490 IPR008357 Lantibiotic leader peptide-processing serine protease CJO35_20490 IPR022398 Peptidase S8, subtilisin, His-active site CJO35_20490 IPR000209 Peptidase S8/S53 domain CJO35_20490 IPR023828 Peptidase S8, subtilisin, Ser-active site CJO35_20490 IPR015500 Peptidase S8, subtilisin-related CJO35_20490 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily CJO35_20490 IPR036852 Peptidase S8/S53 domain superfamily CJO35_20490 IPR023827 Peptidase S8, subtilisin, Asp-active site CJO35_20495 IPR003439 ABC transporter-like CJO35_20495 IPR017871 ABC transporter, conserved site CJO35_20495 IPR039395 Peptidase C39-like A CJO35_20495 IPR010132 ATPase, type I secretion system, HlyB CJO35_20495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20495 IPR005074 Peptidase C39, bacteriocin processing CJO35_20495 IPR011527 ABC transporter type 1, transmembrane domain CJO35_20495 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_20495 IPR003593 AAA+ ATPase domain CJO35_20495 IPR039421 Type I protein exporter CJO35_20505 IPR027632 Type 2 lantibiotic, SP_1948 family CJO35_20510 IPR029243 Lantibiotic alpha component CJO35_20520 IPR002022 Pectate lyase CJO35_20520 IPR011050 Pectin lyase fold/virulence factor CJO35_20520 IPR012334 Pectin lyase fold CJO35_20525 IPR017953 Carbohydrate kinase, predicted, conserved site CJO35_20525 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CJO35_20525 IPR029056 Ribokinase-like CJO35_20530 IPR003593 AAA+ ATPase domain CJO35_20530 IPR011527 ABC transporter type 1, transmembrane domain CJO35_20530 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CJO35_20530 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_20530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20530 IPR017871 ABC transporter, conserved site CJO35_20530 IPR003439 ABC transporter-like CJO35_20535 IPR011527 ABC transporter type 1, transmembrane domain CJO35_20535 IPR003593 AAA+ ATPase domain CJO35_20535 IPR039421 Type I protein exporter CJO35_20535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20535 IPR003439 ABC transporter-like CJO35_20535 IPR036640 ABC transporter type 1, transmembrane domain superfamily CJO35_20535 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CJO35_20535 IPR017871 ABC transporter, conserved site CJO35_20540 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CJO35_20545 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CJO35_20555 IPR000292 Formate/nitrite transporter CJO35_20555 IPR024002 Formate/nitrite transporter, conserved site CJO35_20555 IPR023271 Aquaporin-like CJO35_20565 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CJO35_20565 IPR012301 Malic enzyme, N-terminal domain CJO35_20565 IPR037062 Malic enzyme, N-terminal domain superfamily CJO35_20565 IPR012302 Malic enzyme, NAD-binding CJO35_20565 IPR001891 Malic oxidoreductase CJO35_20565 IPR036291 NAD(P)-binding domain superfamily CJO35_20565 IPR002912 ACT domain CJO35_20565 IPR015884 Malic enzyme, conserved site CJO35_20570 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CJO35_20570 IPR004770 Na+/H+ antiporter NhaC CJO35_20575 IPR004708 Aspartate ammonia-lyase CJO35_20575 IPR024083 Fumarase/histidase, N-terminal CJO35_20575 IPR008948 L-Aspartase-like CJO35_20575 IPR018951 Fumarase C, C-terminal CJO35_20575 IPR020557 Fumarate lyase, conserved site CJO35_20575 IPR000362 Fumarate lyase family CJO35_20575 IPR022761 Fumarate lyase, N-terminal CJO35_20580 IPR036152 Asparaginase/glutaminase-like superfamily CJO35_20580 IPR040919 Asparaginase/glutaminase, C-terminal CJO35_20580 IPR027473 L-asparaginase, C-terminal CJO35_20580 IPR041725 Type I (cytosolic) L-asparaginase CJO35_20580 IPR027474 L-asparaginase, N-terminal CJO35_20580 IPR037152 L-asparaginase, N-terminal domain superfamily CJO35_20580 IPR027475 Asparaginase/glutaminase, active site 2 CJO35_20580 IPR020827 Asparaginase/glutaminase, active site 1 CJO35_20580 IPR006033 Type I L-asparaginase family CJO35_20580 IPR006034 Asparaginase/glutaminase-like CJO35_20585 IPR001387 Cro/C1-type helix-turn-helix domain CJO35_20585 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_20590 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CJO35_20590 IPR019405 Lactonase, 7-bladed beta propeller CJO35_20590 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CJO35_20595 IPR039420 Transcriptional regulatory protein WalR-like CJO35_20595 IPR011006 CheY-like superfamily CJO35_20595 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_20595 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_20595 IPR001789 Signal transduction response regulator, receiver domain CJO35_20595 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20600 IPR005467 Histidine kinase domain CJO35_20600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_20600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_20600 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_20600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_20610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20610 IPR017871 ABC transporter, conserved site CJO35_20610 IPR003439 ABC transporter-like CJO35_20610 IPR003593 AAA+ ATPase domain CJO35_20615 IPR027022 ABC transporter permease protein, BceB-type CJO35_20615 IPR003838 ABC transporter permease protein domain CJO35_20620 IPR006542 Protein of unknown function DUF1093 CJO35_20620 IPR036166 YxeA-like superfamily CJO35_20630 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CJO35_20630 IPR002509 NodB homology domain CJO35_20635 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_20635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_20635 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20635 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20635 IPR004839 Aminotransferase, class I/classII CJO35_20635 IPR000524 Transcription regulator HTH, GntR CJO35_20640 IPR009875 PilZ domain CJO35_20640 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_20640 IPR001173 Glycosyltransferase 2-like CJO35_20640 IPR005150 Cellulose synthase CJO35_20640 IPR003919 Cellulose synthase, subunit A CJO35_20645 IPR004679 2-hydroxycarboxylate transporter CJO35_20645 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes CJO35_20650 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CJO35_20650 IPR030395 Glycerophosphodiester phosphodiesterase domain CJO35_20655 IPR008613 Excalibur calcium-binding domain CJO35_20665 IPR000917 Sulfatase, N-terminal CJO35_20665 IPR012160 Lipoteichoic acid synthase-like CJO35_20665 IPR017850 Alkaline-phosphatase-like, core domain superfamily CJO35_20670 IPR035324 Protein of unknown function DUF5381 CJO35_20675 IPR019264 Domain of unknown function DUF2179 CJO35_20675 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJO35_20675 IPR003740 Uncharacterised membrane protein YitT CJO35_20680 IPR001669 Arginine repressor CJO35_20680 IPR036251 Arginine repressor, C-terminal domain superfamily CJO35_20680 IPR036390 Winged helix DNA-binding domain superfamily CJO35_20680 IPR020899 Arginine repressor, C-terminal CJO35_20680 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20680 IPR020900 Arginine repressor, DNA-binding domain CJO35_20690 IPR003876 Arginine deiminase CJO35_20695 IPR006130 Aspartate/ornithine carbamoyltransferase CJO35_20695 IPR024904 Ornithine carbamoyltransferase CJO35_20695 IPR002292 Ornithine/putrescine carbamoyltransferase CJO35_20695 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CJO35_20695 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CJO35_20695 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CJO35_20700 IPR004754 Amino acid antiporter CJO35_20700 IPR022461 Arginine/ornithine antiporter CJO35_20700 IPR002293 Amino acid/polyamine transporter I CJO35_20705 IPR003964 Carbamate kinase CJO35_20705 IPR001048 Aspartate/glutamate/uridylate kinase CJO35_20705 IPR036393 Acetylglutamate kinase-like superfamily CJO35_20720 IPR004796 Phosphotransferase system, cellobiose-type IIC component CJO35_20720 IPR003352 Phosphotransferase system, EIIC CJO35_20720 IPR004501 Phosphotransferase system, EIIC component, type 3 CJO35_20730 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20730 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_20730 IPR013325 RNA polymerase sigma factor, region 2 CJO35_20730 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CJO35_20730 IPR007627 RNA polymerase sigma-70 region 2 CJO35_20730 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CJO35_20730 IPR039425 RNA polymerase sigma-70 like CJO35_20730 IPR014284 RNA polymerase sigma-70 like domain CJO35_20740 IPR010161 Peptidase M20B, tripeptide aminopeptidase CJO35_20740 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CJO35_20740 IPR036264 Bacterial exopeptidase dimerisation domain CJO35_20740 IPR011650 Peptidase M20, dimerisation domain CJO35_20740 IPR002933 Peptidase M20 CJO35_20750 IPR013148 Glycosyl hydrolase family 32, N-terminal CJO35_20750 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CJO35_20750 IPR001362 Glycoside hydrolase, family 32 CJO35_20750 IPR018053 Glycoside hydrolase, family 32, active site CJO35_20750 IPR006232 Sucrose-6-phosphate hydrolase CJO35_20750 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_20750 IPR013189 Glycosyl hydrolase family 32, C-terminal CJO35_20755 IPR020846 Major facilitator superfamily domain CJO35_20755 IPR000576 LacY/RafB permease family CJO35_20755 IPR036259 MFS transporter superfamily CJO35_20755 IPR018457 LacY/RafB permease family, conserved site CJO35_20765 IPR028082 Periplasmic binding protein-like I CJO35_20765 IPR000843 LacI-type HTH domain CJO35_20765 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_20780 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CJO35_20780 IPR038071 UROD/MetE-like superfamily CJO35_20785 IPR038731 Glycosyltransferase RgtA/B/C/D-like CJO35_20790 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_20790 IPR001173 Glycosyltransferase 2-like CJO35_20795 IPR005886 UDP-glucose 4-epimerase CJO35_20795 IPR036291 NAD(P)-binding domain superfamily CJO35_20795 IPR001509 NAD-dependent epimerase/dehydratase CJO35_20820 IPR011657 Concentrative nucleoside transporter C-terminal domain CJO35_20820 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CJO35_20820 IPR008276 Concentrative nucleoside transporter CJO35_20820 IPR002668 Concentrative nucleoside transporter N-terminal domain CJO35_20825 IPR018028 Catalase, mono-functional, haem-containing CJO35_20825 IPR011614 Catalase core domain CJO35_20825 IPR037060 Catalase core domain superfamily CJO35_20825 IPR010582 Catalase immune-responsive domain CJO35_20825 IPR029062 Class I glutamine amidotransferase-like CJO35_20825 IPR020835 Catalase superfamily CJO35_20825 IPR041399 Large catalase, C-terminal domain CJO35_20825 IPR024712 Catalase, mono-functional, haem-containing, clade 2 CJO35_20825 IPR002226 Catalase haem-binding site CJO35_20825 IPR024708 Catalase active site CJO35_20835 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CJO35_20835 IPR001360 Glycoside hydrolase family 1 CJO35_20835 IPR018120 Glycoside hydrolase family 1, active site CJO35_20835 IPR017853 Glycoside hydrolase superfamily CJO35_20840 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_20840 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CJO35_20840 IPR003352 Phosphotransferase system, EIIC CJO35_20840 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_20840 IPR036878 Glucose permease domain IIB CJO35_20840 IPR011055 Duplicated hybrid motif CJO35_20840 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_20840 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component CJO35_20850 IPR003339 ABC/ECF transporter, transmembrane component CJO35_20855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20855 IPR003593 AAA+ ATPase domain CJO35_20855 IPR003439 ABC transporter-like CJO35_20855 IPR017871 ABC transporter, conserved site CJO35_20860 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted CJO35_20865 IPR016084 Haem oxygenase-like, multi-helical CJO35_20865 IPR026285 TenA_E protein CJO35_20865 IPR004305 Thiaminase-2/PQQC CJO35_20865 IPR027574 Thiaminase II CJO35_20870 IPR040442 Pyruvate kinase-like domain superfamily CJO35_20870 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CJO35_20870 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CJO35_20870 IPR006254 Isocitrate lyase CJO35_20870 IPR039556 ICL/PEPM domain CJO35_20875 IPR011076 Malate synthase-like superfamily CJO35_20875 IPR019830 Malate synthase, conserved site CJO35_20875 IPR006252 Malate synthase A CJO35_20875 IPR001465 Malate synthase CJO35_20885 IPR038731 Glycosyltransferase RgtA/B/C/D-like CJO35_20890 IPR027022 ABC transporter permease protein, BceB-type CJO35_20890 IPR003838 ABC transporter permease protein domain CJO35_20895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20895 IPR003439 ABC transporter-like CJO35_20895 IPR003593 AAA+ ATPase domain CJO35_20900 IPR005467 Histidine kinase domain CJO35_20900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_20900 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_20900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_20905 IPR001789 Signal transduction response regulator, receiver domain CJO35_20905 IPR011006 CheY-like superfamily CJO35_20905 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_20905 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_20905 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_20905 IPR039420 Transcriptional regulatory protein WalR-like CJO35_20910 IPR018120 Glycoside hydrolase family 1, active site CJO35_20910 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CJO35_20910 IPR017853 Glycoside hydrolase superfamily CJO35_20910 IPR001360 Glycoside hydrolase family 1 CJO35_20915 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component CJO35_20915 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_20915 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CJO35_20915 IPR003352 Phosphotransferase system, EIIC CJO35_20915 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_20915 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_20915 IPR036878 Glucose permease domain IIB CJO35_20915 IPR011055 Duplicated hybrid motif CJO35_20925 IPR029055 Nucleophile aminohydrolases, N-terminal CJO35_20925 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CJO35_20940 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal CJO35_20940 IPR006710 Glycoside hydrolase, family 43 CJO35_20940 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CJO35_20945 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CJO35_20945 IPR014014 RNA helicase, DEAD-box type, Q motif CJO35_20945 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CJO35_20945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_20945 IPR001650 Helicase, C-terminal CJO35_20945 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJO35_20945 IPR028619 ATP-dependent RNA helicase DbpA CJO35_20945 IPR011545 DEAD/DEAH box helicase domain CJO35_20945 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CJO35_20975 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CJO35_20975 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic CJO35_20975 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CJO35_20975 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily CJO35_20975 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase CJO35_20975 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CJO35_20975 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CJO35_20975 IPR017459 Glycosyl transferase family 3, N-terminal domain CJO35_20975 IPR000312 Glycosyl transferase, family 3 CJO35_20980 IPR008276 Concentrative nucleoside transporter CJO35_20980 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CJO35_20980 IPR011657 Concentrative nucleoside transporter C-terminal domain CJO35_20980 IPR002668 Concentrative nucleoside transporter N-terminal domain CJO35_20985 IPR028581 Deoxyribose-phosphate aldolase type I CJO35_20985 IPR002915 DeoC/FbaB/ lacD aldolase CJO35_20985 IPR011343 Deoxyribose-phosphate aldolase CJO35_20985 IPR013785 Aldolase-type TIM barrel CJO35_20990 IPR013324 RNA polymerase sigma factor, region 3/4-like CJO35_20990 IPR037171 NagB/RpiA transferase-like CJO35_20990 IPR007324 Sugar-binding domain, putative CJO35_21000 IPR012341 Six-hairpin glycosidase-like superfamily CJO35_21000 IPR008928 Six-hairpin glycosidase superfamily CJO35_21005 IPR029787 Nucleotide cyclase CJO35_21005 IPR000160 GGDEF domain CJO35_21010 IPR018763 Protein of unknown function DUF2334 CJO35_21015 IPR029044 Nucleotide-diphospho-sugar transferases CJO35_21025 IPR015424 Pyridoxal phosphate-dependent transferase CJO35_21025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CJO35_21025 IPR004839 Aminotransferase, class I/classII CJO35_21040 IPR013815 ATP-grasp fold, subdomain 1 CJO35_21040 IPR011761 ATP-grasp fold CJO35_21040 IPR016185 Pre-ATP-grasp domain superfamily CJO35_21040 IPR011095 D-alanine--D-alanine ligase, C-terminal CJO35_21050 IPR013785 Aldolase-type TIM barrel CJO35_21050 IPR000771 Fructose-bisphosphate aldolase, class-II CJO35_21050 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 CJO35_21055 IPR036237 Xylose isomerase-like superfamily CJO35_21055 IPR013022 Xylose isomerase-like, TIM barrel domain CJO35_21060 IPR036237 Xylose isomerase-like superfamily CJO35_21060 IPR013022 Xylose isomerase-like, TIM barrel domain CJO35_21065 IPR036291 NAD(P)-binding domain superfamily CJO35_21065 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase CJO35_21065 IPR004104 Oxidoreductase, C-terminal CJO35_21065 IPR000683 Oxidoreductase, N-terminal CJO35_21070 IPR036259 MFS transporter superfamily CJO35_21070 IPR005829 Sugar transporter, conserved site CJO35_21070 IPR011701 Major facilitator superfamily CJO35_21070 IPR020846 Major facilitator superfamily domain CJO35_21075 IPR023952 Inosose dehydratase CJO35_21075 IPR030823 IolE/MocC family CJO35_21075 IPR013022 Xylose isomerase-like, TIM barrel domain CJO35_21075 IPR036237 Xylose isomerase-like superfamily CJO35_21080 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CJO35_21080 IPR000399 TPP-binding enzyme, conserved site CJO35_21080 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CJO35_21080 IPR012000 Thiamine pyrophosphate enzyme, central domain CJO35_21080 IPR029061 Thiamin diphosphate-binding fold CJO35_21080 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes CJO35_21080 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase CJO35_21080 IPR029035 DHS-like NAD/FAD-binding domain superfamily CJO35_21085 IPR030830 5-Dehydro-2-deoxygluconokinase CJO35_21085 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CJO35_21085 IPR011611 Carbohydrate kinase PfkB CJO35_21085 IPR029056 Ribokinase-like CJO35_21085 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily CJO35_21085 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes CJO35_21090 IPR014710 RmlC-like jelly roll fold CJO35_21090 IPR023770 5-deoxy-glucuronate isomerase, Bacilli CJO35_21090 IPR021120 KduI/IolB isomerase CJO35_21090 IPR024203 5-deoxy-glucuronate isomerase, IolB CJO35_21090 IPR011051 RmlC-like cupin domain superfamily CJO35_21095 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_21095 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_21095 IPR016160 Aldehyde dehydrogenase, cysteine active site CJO35_21095 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_21095 IPR015590 Aldehyde dehydrogenase domain CJO35_21095 IPR010061 Methylmalonate-semialdehyde dehydrogenase CJO35_21095 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria CJO35_21100 IPR014036 DeoR C-terminal sensor domain CJO35_21100 IPR001034 DeoR-type HTH domain CJO35_21100 IPR037171 NagB/RpiA transferase-like CJO35_21100 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CJO35_21100 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_21100 IPR036390 Winged helix DNA-binding domain superfamily CJO35_21105 IPR018170 Aldo/keto reductase, conserved site CJO35_21105 IPR036812 NADP-dependent oxidoreductase domain superfamily CJO35_21105 IPR020471 Aldo/keto reductase CJO35_21105 IPR023210 NADP-dependent oxidoreductase domain CJO35_21110 IPR030395 Glycerophosphodiester phosphodiesterase domain CJO35_21110 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CJO35_21115 IPR005267 Glycerol-3-phosphate transporter CJO35_21115 IPR000849 Sugar phosphate transporter CJO35_21115 IPR021159 Glycerate/sugar phosphate transporter, conserved site CJO35_21115 IPR036259 MFS transporter superfamily CJO35_21115 IPR020846 Major facilitator superfamily domain CJO35_21115 IPR011701 Major facilitator superfamily CJO35_21120 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_21120 IPR019805 Heat shock protein Hsp90, conserved site CJO35_21120 IPR020575 Heat shock protein Hsp90, N-terminal CJO35_21120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_21120 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_21120 IPR037196 HSP90, C-terminal domain CJO35_21120 IPR001404 Heat shock protein Hsp90 family CJO35_21125 IPR017871 ABC transporter, conserved site CJO35_21125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21125 IPR003593 AAA+ ATPase domain CJO35_21125 IPR032781 ABC-transporter extension domain CJO35_21125 IPR003439 ABC transporter-like CJO35_21130 IPR000150 Cof family CJO35_21130 IPR023214 HAD superfamily CJO35_21130 IPR036412 HAD-like superfamily CJO35_21130 IPR006379 HAD-superfamily hydrolase, subfamily IIB CJO35_21150 IPR002491 ABC transporter periplasmic binding domain CJO35_21170 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain CJO35_21170 IPR030389 FeoB-type guanine nucleotide-binding (G) domain CJO35_21170 IPR041069 FeoB, cytosolic helical domain CJO35_21170 IPR011640 Ferrous iron transport protein B, C-terminal CJO35_21170 IPR003373 Ferrous iron transport protein B CJO35_21170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21180 IPR002656 Acyltransferase 3 CJO35_21185 IPR003838 ABC transporter permease protein domain CJO35_21185 IPR027022 ABC transporter permease protein, BceB-type CJO35_21190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21190 IPR017871 ABC transporter, conserved site CJO35_21190 IPR003439 ABC transporter-like CJO35_21190 IPR003593 AAA+ ATPase domain CJO35_21195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_21195 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_21195 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_21195 IPR005467 Histidine kinase domain CJO35_21195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_21200 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_21200 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_21200 IPR039420 Transcriptional regulatory protein WalR-like CJO35_21200 IPR011006 CheY-like superfamily CJO35_21200 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_21200 IPR001789 Signal transduction response regulator, receiver domain CJO35_21210 IPR003660 HAMP domain CJO35_21210 IPR007891 CHASE3 CJO35_21210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CJO35_21210 IPR004090 Chemotaxis methyl-accepting receptor CJO35_21215 IPR001463 Sodium:alanine symporter CJO35_21220 IPR008141 Alanine dehydrogenase CJO35_21220 IPR036291 NAD(P)-binding domain superfamily CJO35_21220 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CJO35_21220 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CJO35_21220 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CJO35_21220 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CJO35_21225 IPR011683 Glycosyl hydrolase family 53 CJO35_21225 IPR017853 Glycoside hydrolase superfamily CJO35_21230 IPR013738 Beta-galactosidase trimerisation CJO35_21230 IPR017853 Glycoside hydrolase superfamily CJO35_21230 IPR013780 Glycosyl hydrolase, all-beta CJO35_21230 IPR013529 Glycoside hydrolase, family 42, N-terminal CJO35_21230 IPR003476 Glycoside hydrolase, family 42 CJO35_21230 IPR013739 Beta-galactosidase C-terminal CJO35_21230 IPR029062 Class I glutamine amidotransferase-like CJO35_21235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_21235 IPR035906 MetI-like superfamily CJO35_21240 IPR035906 MetI-like superfamily CJO35_21240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CJO35_21245 IPR006059 Bacterial extracellular solute-binding protein CJO35_21245 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein CJO35_21250 IPR028082 Periplasmic binding protein-like I CJO35_21250 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CJO35_21250 IPR000843 LacI-type HTH domain CJO35_21255 IPR000705 Galactokinase CJO35_21255 IPR022963 Galactokinase, bacterial CJO35_21255 IPR019741 Galactokinase, conserved site CJO35_21255 IPR019539 Galactokinase galactose-binding domain CJO35_21255 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_21255 IPR006206 Mevalonate/galactokinase CJO35_21255 IPR006203 GHMP kinase, ATP-binding, conserved site CJO35_21255 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_21255 IPR036554 GHMP kinase, C-terminal domain superfamily CJO35_21255 IPR013750 GHMP kinase, C-terminal domain CJO35_21255 IPR006204 GHMP kinase N-terminal domain CJO35_21260 IPR036291 NAD(P)-binding domain superfamily CJO35_21260 IPR016040 NAD(P)-binding domain CJO35_21260 IPR005886 UDP-glucose 4-epimerase CJO35_21265 IPR000766 Galactose-1-phosphate uridyl transferase, class II CJO35_21265 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site CJO35_21265 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal CJO35_21265 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal CJO35_21270 IPR022687 DTXR-type HTH domain CJO35_21270 IPR000600 ROK family CJO35_21270 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_21270 IPR036390 Winged helix DNA-binding domain superfamily CJO35_21275 IPR036390 Winged helix DNA-binding domain superfamily CJO35_21275 IPR011711 GntR, C-terminal CJO35_21275 IPR008920 Transcription regulator FadR/GntR, C-terminal CJO35_21275 IPR000524 Transcription regulator HTH, GntR CJO35_21275 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_21280 IPR000577 Carbohydrate kinase, FGGY CJO35_21280 IPR018485 Carbohydrate kinase, FGGY, C-terminal CJO35_21280 IPR018483 Carbohydrate kinase, FGGY, conserved site CJO35_21280 IPR018484 Carbohydrate kinase, FGGY, N-terminal CJO35_21280 IPR006002 Gluconate kinase CJO35_21285 IPR003474 Gluconate transporter CJO35_21290 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CJO35_21290 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CJO35_21290 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CJO35_21290 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CJO35_21290 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CJO35_21290 IPR006183 6-phosphogluconate dehydrogenase CJO35_21290 IPR036291 NAD(P)-binding domain superfamily CJO35_21290 IPR006184 6-phosphogluconate-binding site CJO35_21295 IPR016161 Aldehyde/histidinol dehydrogenase CJO35_21295 IPR016163 Aldehyde dehydrogenase, C-terminal CJO35_21295 IPR015590 Aldehyde dehydrogenase domain CJO35_21295 IPR039697 Iron-type alcohol dehydrogenase-like CJO35_21295 IPR016162 Aldehyde dehydrogenase, N-terminal CJO35_21295 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CJO35_21295 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain CJO35_21295 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase CJO35_21295 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CJO35_21300 IPR017559 Alkyl hydroperoxide reductase subunit C CJO35_21300 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CJO35_21300 IPR036249 Thioredoxin-like superfamily CJO35_21300 IPR024706 Peroxiredoxin, AhpC-type CJO35_21300 IPR013766 Thioredoxin domain CJO35_21305 IPR012081 Alkyl hydroperoxide reductase subunit F CJO35_21305 IPR002109 Glutaredoxin CJO35_21305 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_21305 IPR012336 Thioredoxin-like fold CJO35_21305 IPR023753 FAD/NAD(P)-binding domain CJO35_21305 IPR036249 Thioredoxin-like superfamily CJO35_21305 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CJO35_21330 IPR003593 AAA+ ATPase domain CJO35_21330 IPR003439 ABC transporter-like CJO35_21330 IPR017871 ABC transporter, conserved site CJO35_21330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21335 IPR000412 ABC-2 transporter CJO35_21340 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CJO35_21340 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_21340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_21345 IPR011006 CheY-like superfamily CJO35_21345 IPR000792 Transcription regulator LuxR, C-terminal CJO35_21345 IPR001789 Signal transduction response regulator, receiver domain CJO35_21345 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_21360 IPR017871 ABC transporter, conserved site CJO35_21360 IPR014710 RmlC-like jelly roll fold CJO35_21360 IPR003439 ABC transporter-like CJO35_21360 IPR003593 AAA+ ATPase domain CJO35_21360 IPR000595 Cyclic nucleotide-binding domain CJO35_21360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21360 IPR018488 Cyclic nucleotide-binding, conserved site CJO35_21360 IPR018490 Cyclic nucleotide-binding-like CJO35_21370 IPR003742 RNA methyltransferase RlmH CJO35_21370 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJO35_21370 IPR029028 Alpha/beta knot methyltransferases CJO35_21375 IPR025626 YyzF-like protein CJO35_21385 IPR016181 Acyl-CoA N-acyltransferase CJO35_21385 IPR000182 GNAT domain CJO35_21400 IPR001478 PDZ domain CJO35_21400 IPR036034 PDZ superfamily CJO35_21400 IPR009003 Peptidase S1, PA clan CJO35_21400 IPR001940 Peptidase S1C CJO35_21405 IPR001279 Metallo-beta-lactamase CJO35_21405 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CJO35_21410 IPR018604 Regulatory protein YycH-like CJO35_21410 IPR042274 Regulatory protein YycH/YycI , domain 2 CJO35_21415 IPR042274 Regulatory protein YycH/YycI , domain 2 CJO35_21415 IPR009996 Regulatory protein YycH CJO35_21420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CJO35_21420 IPR000700 PAS-associated, C-terminal CJO35_21420 IPR000014 PAS domain CJO35_21420 IPR003660 HAMP domain CJO35_21420 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CJO35_21420 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CJO35_21420 IPR005467 Histidine kinase domain CJO35_21420 IPR003594 Histidine kinase/HSP90-like ATPase CJO35_21420 IPR001610 PAC motif CJO35_21420 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CJO35_21420 IPR035965 PAS domain superfamily CJO35_21425 IPR039420 Transcriptional regulatory protein WalR-like CJO35_21425 IPR036388 Winged helix-like DNA-binding domain superfamily CJO35_21425 IPR001789 Signal transduction response regulator, receiver domain CJO35_21425 IPR016032 Signal transduction response regulator, C-terminal effector CJO35_21425 IPR011006 CheY-like superfamily CJO35_21425 IPR001867 OmpR/PhoB-type DNA-binding domain CJO35_21450 IPR015797 NUDIX hydrolase-like domain superfamily CJO35_21450 IPR000086 NUDIX hydrolase domain CJO35_21455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21455 IPR033128 Adenylosuccinate synthase, active site CJO35_21455 IPR042111 Adenylosuccinate synthetase, domain 3 CJO35_21455 IPR042109 Adenylosuccinate synthetase, domain 1 CJO35_21455 IPR001114 Adenylosuccinate synthetase CJO35_21455 IPR018220 Adenylosuccinate synthase, GTP-binding site CJO35_21455 IPR042110 Adenylosuccinate synthetase, domain 2 CJO35_21465 IPR007692 DNA helicase, DnaB type CJO35_21465 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CJO35_21465 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CJO35_21465 IPR003593 AAA+ ATPase domain CJO35_21465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21465 IPR007693 DNA helicase, DnaB-like, N-terminal CJO35_21465 IPR007694 DNA helicase, DnaB-like, C-terminal CJO35_21470 IPR018691 Protein of unknown function DUF2188 CJO35_21480 IPR025550 YycC-like protein CJO35_21485 IPR036259 MFS transporter superfamily CJO35_21485 IPR020846 Major facilitator superfamily domain CJO35_21485 IPR011701 Major facilitator superfamily CJO35_21485 IPR004747 Cyanate transport system protein CJO35_21490 IPR032466 Metal-dependent hydrolase CJO35_21490 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CJO35_21490 IPR006680 Amidohydrolase-related CJO35_21490 IPR011059 Metal-dependent hydrolase, composite domain superfamily CJO35_21495 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CJO35_21495 IPR004547 Glucosamine-6-phosphate isomerase CJO35_21495 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CJO35_21495 IPR037171 NagB/RpiA transferase-like CJO35_21505 IPR001347 Sugar isomerase (SIS) CJO35_21505 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CJO35_21505 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein CJO35_21510 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CJO35_21510 IPR013013 Phosphotransferase system, EIIC component, type 1 CJO35_21510 IPR001996 Phosphotransferase system, IIB component, type 1 CJO35_21510 IPR003352 Phosphotransferase system, EIIC CJO35_21510 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CJO35_21510 IPR036878 Glucose permease domain IIB CJO35_21515 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CJO35_21515 IPR000244 Ribosomal protein L9 CJO35_21515 IPR020069 Ribosomal protein L9, C-terminal CJO35_21515 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CJO35_21515 IPR020070 Ribosomal protein L9, N-terminal CJO35_21515 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CJO35_21515 IPR020594 Ribosomal protein L9, bacteria/chloroplast CJO35_21520 IPR038763 DHH phosphoesterase superfamily CJO35_21520 IPR000160 GGDEF domain CJO35_21520 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA CJO35_21520 IPR003156 DHHA1 domain CJO35_21520 IPR001667 DDH domain CJO35_21525 IPR018710 Protein of unknown function DUF2232 CJO35_21535 IPR012851 Spore coat protein CotF-like CJO35_21535 IPR016493 Spore coat protein CotF CJO35_21540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJO35_21540 IPR006015 Universal stress protein A family CJO35_21540 IPR006016 UspA CJO35_21545 IPR011547 SLC26A/SulP transporter domain CJO35_21545 IPR002645 STAS domain CJO35_21545 IPR001902 SLC26A/SulP transporter CJO35_21545 IPR036513 STAS domain superfamily CJO35_21545 IPR018045 Sulphate anion transporter, conserved site CJO35_21550 IPR020846 Major facilitator superfamily domain CJO35_21550 IPR036259 MFS transporter superfamily CJO35_21550 IPR011701 Major facilitator superfamily CJO35_21555 IPR018275 Ribosomal protein S18, conserved site CJO35_21555 IPR036870 Ribosomal protein S18 superfamily CJO35_21555 IPR001648 Ribosomal protein S18 CJO35_21560 IPR011344 Single-stranded DNA-binding protein CJO35_21560 IPR000424 Primosome PriB/single-strand DNA-binding CJO35_21560 IPR012340 Nucleic acid-binding, OB-fold CJO35_21565 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CJO35_21565 IPR035980 Ribosomal protein S6 superfamily CJO35_21565 IPR000529 Ribosomal protein S6 CJO35_21565 IPR020815 Ribosomal protein S6, conserved site CJO35_21565 IPR020814 Ribosomal protein S6, plastid/chloroplast CJO35_21570 IPR041706 YchF, N-terminal CJO35_21570 IPR013029 YchF, C-terminal domain CJO35_21570 IPR023192 TGS-like domain superfamily CJO35_21570 IPR004095 TGS CJO35_21570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21570 IPR006073 GTP binding domain CJO35_21570 IPR031167 OBG-type guanine nucleotide-binding (G) domain CJO35_21570 IPR012675 Beta-grasp domain superfamily CJO35_21570 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CJO35_21570 IPR012676 TGS-like CJO35_21580 IPR009296 Protein of unknown function DUF951 CJO35_21585 IPR038728 Uncharacterized membrane protein YkvI CJO35_21590 IPR023430 Peptidase HybD-like domain superfamily CJO35_21590 IPR009665 Protein of unknown function DUF1256 CJO35_21595 IPR041468 ParB/Spo0J, HTH domain CJO35_21595 IPR036086 ParB/Sulfiredoxin superfamily CJO35_21595 IPR004437 ParB/RepB/Spo0J partition protein CJO35_21595 IPR003115 ParB/Sulfiredoxin CJO35_21600 IPR025669 AAA domain CJO35_21600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21605 IPR029032 AhpD-like CJO35_21605 IPR003779 Carboxymuconolactone decarboxylase-like CJO35_21605 IPR004675 Alkylhydroperoxidase AhpD core CJO35_21615 IPR003115 ParB/Sulfiredoxin CJO35_21615 IPR041468 ParB/Spo0J, HTH domain CJO35_21615 IPR004437 ParB/RepB/Spo0J partition protein CJO35_21615 IPR036086 ParB/Sulfiredoxin superfamily CJO35_21615 IPR023705 Nucleoid occlusion protein CJO35_21620 IPR003682 rRNA small subunit methyltransferase G CJO35_21620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJO35_21625 IPR026904 GidA associated domain 3 CJO35_21625 IPR020595 MnmG-related, conserved site CJO35_21625 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CJO35_21625 IPR036188 FAD/NAD(P)-binding domain superfamily CJO35_21625 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CJO35_21630 IPR018948 GTP-binding protein TrmE, N-terminal CJO35_21630 IPR006073 GTP binding domain CJO35_21630 IPR004520 tRNA modification GTPase MnmE CJO35_21630 IPR027368 tRNA modification GTPase MnmE domain 2 CJO35_21630 IPR025867 MnmE, helical domain CJO35_21630 IPR005225 Small GTP-binding protein domain CJO35_21630 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CJO35_21630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJO35_21630 IPR031168 TrmE-type guanine nucleotide-binding domain CJO35_21635 IPR039247 Jag protein CJO35_21635 IPR034079 Jag, R3H domain CJO35_21635 IPR036867 R3H domain superfamily CJO35_21635 IPR001374 R3H domain CJO35_21635 IPR038008 Jag, KH domain CJO35_21635 IPR004087 K Homology domain CJO35_21635 IPR015946 K homology domain-like, alpha/beta CJO35_21635 IPR038247 Jag, N-terminal domain superfamily CJO35_21635 IPR032782 Jag, N-terminal CJO35_21640 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CJO35_21640 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes CJO35_21640 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CJO35_21645 IPR020539 Ribonuclease P, conserved site CJO35_21645 IPR000100 Ribonuclease P CJO35_21645 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJO35_21645 IPR020568 Ribosomal protein S5 domain 2-type fold CJO35_21650 IPR000271 Ribosomal protein L34 CJO35_21650 IPR020939 Ribosomal protein L34, conserved site