locus-tag class description GNE05_00005 PF11638 DnaA N-terminal domain GNE05_00005 PF08299 Bacterial dnaA protein helix-turn-helix GNE05_00005 PF00308 Bacterial dnaA protein GNE05_00010 PF02767 DNA polymerase III beta subunit, central domain GNE05_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GNE05_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GNE05_00020 PF02463 RecF/RecN/SMC N terminal domain GNE05_00025 PF04025 Domain of unknown function (DUF370) GNE05_00030 PF01751 Toprim domain GNE05_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_00030 PF00986 DNA gyrase B subunit, carboxyl terminus GNE05_00030 PF00204 DNA gyrase B GNE05_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A GNE05_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller GNE05_00065 PF14175 YaaC-like Protein GNE05_00070 PF00571 CBS domain GNE05_00070 PF00478 IMP dehydrogenase / GMP reductase domain GNE05_00075 PF07943 Penicillin-binding protein 5, C-terminal domain GNE05_00075 PF00768 D-alanyl-D-alanine carboxypeptidase GNE05_00080 PF01680 SOR/SNZ family GNE05_00085 PF01174 SNO glutamine amidotransferase family GNE05_00090 PF02403 Seryl-tRNA synthetase N-terminal domain GNE05_00090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE05_00095 PF02595 Glycerate kinase family GNE05_00105 PF01712 Deoxynucleoside kinase GNE05_00110 PF01712 Deoxynucleoside kinase GNE05_00115 PF01476 LysM domain GNE05_00115 PF00704 Glycosyl hydrolases family 18 GNE05_00120 PF00857 Isochorismatase family GNE05_00125 PF14437 MafB19-like deaminase GNE05_00135 PF12169 DNA polymerase III subunits gamma and tau domain III GNE05_00140 PF02575 YbaB/EbfC DNA-binding family GNE05_00145 PF02132 RecR protein GNE05_00145 PF13662 Toprim domain GNE05_00150 PF10704 Protein of unknown function (DUF2508) GNE05_00155 PF07441 SigmaK-factor processing regulatory protein BofA GNE05_00185 PF10764 Inhibitor of sigma-G Gin GNE05_00190 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein GNE05_00195 PF05816 Toxic anion resistance protein (TelA) GNE05_00200 PF01276 Orn/Lys/Arg decarboxylase, major domain GNE05_00200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GNE05_00205 PF02223 Thymidylate kinase GNE05_00210 PF06153 Cyclic-di-AMP receptor GNE05_00215 PF03885 Protein of unknown function (DUF327) GNE05_00220 PF09115 DNA polymerase III, delta subunit, C terminal GNE05_00225 PF04468 PSP1 C-terminal conserved region GNE05_00230 PF06156 Initiation control protein YabA GNE05_00235 PF05175 Methyltransferase small domain GNE05_00240 PF01541 GIY-YIG catalytic domain GNE05_00245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE05_00250 PF18277 AbrB C-terminal domain GNE05_00250 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNE05_00255 PF08264 Anticodon-binding domain of tRNA GNE05_00255 PF09334 tRNA synthetases class I (M) GNE05_00255 PF01588 Putative tRNA binding domain GNE05_00260 PF01026 TatD related DNase GNE05_00265 PF07501 G5 domain GNE05_00265 PF03990 G5-linked-Ubiquitin-like domain GNE05_00265 PF06725 3D domain GNE05_00270 PF13331 Domain of unknown function (DUF4093) GNE05_00270 PF13662 Toprim domain GNE05_00275 PF00398 Ribosomal RNA adenine dimethylase GNE05_00280 PF05582 YabG peptidase U57 GNE05_00285 PF06257 Biofilm formation stimulator VEG GNE05_00290 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE05_00295 PF00288 GHMP kinases N terminal domain GNE05_00295 PF08544 GHMP kinases C terminal GNE05_00300 PF09182 Bacterial purine repressor, N-terminal GNE05_00300 PF00156 Phosphoribosyl transferase domain GNE05_00305 PF01042 Endoribonuclease L-PSP GNE05_00310 PF04026 SpoVG GNE05_00315 PF00132 Bacterial transferase hexapeptide (six repeats) GNE05_00315 PF00483 Nucleotidyl transferase GNE05_00320 PF14572 Phosphoribosyl synthetase-associated domain GNE05_00320 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GNE05_00325 PF14693 Ribosomal protein TL5, C-terminal domain GNE05_00325 PF01386 Ribosomal L25p family GNE05_00330 PF01195 Peptidyl-tRNA hydrolase GNE05_00335 PF10955 Protein of unknown function (DUF2757) GNE05_00340 PF00271 Helicase conserved C-terminal domain GNE05_00340 PF00270 DEAD/DEAH box helicase GNE05_00340 PF03461 TRCF domain GNE05_00340 PF02559 CarD-like/TRCF domain GNE05_00340 PF17757 UvrB interaction domain GNE05_00345 PF15714 Stage V sporulation protein T C-terminal, transcription factor GNE05_00345 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNE05_00350 PF14667 Polysaccharide biosynthesis C-terminal domain GNE05_00350 PF01943 Polysaccharide biosynthesis protein GNE05_00355 PF03819 MazG nucleotide pyrophosphohydrolase domain GNE05_00355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE05_00360 PF01479 S4 domain GNE05_00365 PF07873 YabP family GNE05_00370 PF09578 Spore cortex protein YabQ (Spore_YabQ) GNE05_00375 PF04977 Septum formation initiator GNE05_00380 PF00575 S1 RNA binding domain GNE05_00395 PF07228 Stage II sporulation protein E (SpoIIE) GNE05_00400 PF00092 von Willebrand factor type A domain GNE05_00405 PF00069 Protein kinase domain GNE05_00410 PF11734 TilS substrate C-terminal domain GNE05_00410 PF01171 PP-loop family GNE05_00410 PF09179 TilS substrate binding domain GNE05_00420 PF01434 Peptidase family M41 GNE05_00420 PF06480 FtsH Extracellular GNE05_00420 PF00004 ATPase family associated with various cellular activities (AAA) GNE05_00420 PF17862 AAA+ lid domain GNE05_00425 PF03309 Type III pantothenate kinase GNE05_00430 PF01430 Hsp33 protein GNE05_00435 PF13145 PPIC-type PPIASE domain GNE05_00440 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_00445 PF04715 Anthranilate synthase component I, N terminal region GNE05_00445 PF00425 chorismate binding enzyme GNE05_00450 PF00117 Glutamine amidotransferase class-I GNE05_00455 PF01063 Amino-transferase class IV GNE05_00460 PF00809 Pterin binding enzyme GNE05_00465 PF02152 Dihydroneopterin aldolase GNE05_00470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GNE05_00475 PF01381 Helix-turn-helix GNE05_00480 PF01207 Dihydrouridine synthase (Dus) GNE05_00485 PF01336 OB-fold nucleic acid binding domain GNE05_00485 PF00152 tRNA synthetases class II (D, K and N) GNE05_00565 PF17727 CtsR C-terminal dimerization domain GNE05_00565 PF05848 CtsR N-terminal HTH domain GNE05_00570 PF02151 UvrB/uvrC motif GNE05_00575 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GNE05_00580 PF17871 AAA lid domain GNE05_00580 PF00004 ATPase family associated with various cellular activities (AAA) GNE05_00580 PF02861 Clp amino terminal domain, pathogenicity island component GNE05_00580 PF07724 AAA domain (Cdc48 subfamily) GNE05_00580 PF10431 C-terminal, D2-small domain, of ClpB protein GNE05_00585 PF18073 Rubredoxin metal binding domain GNE05_00590 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNE05_00590 PF10635 DisA bacterial checkpoint controller linker region GNE05_00600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GNE05_00605 PF02542 YgbB family GNE05_00610 PF00749 tRNA synthetases class I (E and Q), catalytic domain GNE05_00615 PF00132 Bacterial transferase hexapeptide (six repeats) GNE05_00615 PF06426 Serine acetyltransferase, N-terminal GNE05_00620 PF01406 tRNA synthetases class I (C) catalytic domain GNE05_00620 PF09190 DALR domain GNE05_00625 PF00636 Ribonuclease III domain GNE05_00630 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNE05_00630 PF00588 SpoU rRNA Methylase family GNE05_00635 PF05991 YacP-like NYN domain GNE05_00640 PF08281 Sigma-70, region 4 GNE05_00640 PF04542 Sigma-70 region 2 GNE05_00645 PF00471 Ribosomal protein L33 GNE05_00650 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GNE05_00655 PF02357 Transcription termination factor nusG GNE05_00655 PF00467 KOW motif GNE05_00660 PF03946 Ribosomal protein L11, N-terminal domain GNE05_00660 PF00298 Ribosomal protein L11, RNA binding domain GNE05_00665 PF00687 Ribosomal protein L1p/L10e family GNE05_00670 PF00466 Ribosomal protein L10 GNE05_00675 PF00542 Ribosomal protein L7/L12 C-terminal domain GNE05_00675 PF16320 Ribosomal protein L7/L12 dimerisation domain GNE05_00680 PF05175 Methyltransferase small domain GNE05_00685 PF00562 RNA polymerase Rpb2, domain 6 GNE05_00685 PF04563 RNA polymerase beta subunit GNE05_00685 PF04565 RNA polymerase Rpb2, domain 3 GNE05_00685 PF04561 RNA polymerase Rpb2, domain 2 GNE05_00685 PF04560 RNA polymerase Rpb2, domain 7 GNE05_00685 PF10385 RNA polymerase beta subunit external 1 domain GNE05_00690 PF04998 RNA polymerase Rpb1, domain 5 GNE05_00690 PF05000 RNA polymerase Rpb1, domain 4 GNE05_00690 PF00623 RNA polymerase Rpb1, domain 2 GNE05_00690 PF04983 RNA polymerase Rpb1, domain 3 GNE05_00690 PF04997 RNA polymerase Rpb1, domain 1 GNE05_00695 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GNE05_00700 PF00164 Ribosomal protein S12/S23 GNE05_00705 PF00177 Ribosomal protein S7p/S5e GNE05_00710 PF00679 Elongation factor G C-terminus GNE05_00710 PF00009 Elongation factor Tu GTP binding domain GNE05_00710 PF03144 Elongation factor Tu domain 2 GNE05_00710 PF14492 Elongation Factor G, domain II GNE05_00710 PF03764 Elongation factor G, domain IV GNE05_00715 PF03144 Elongation factor Tu domain 2 GNE05_00715 PF03143 Elongation factor Tu C-terminal domain GNE05_00715 PF00009 Elongation factor Tu GTP binding domain GNE05_00720 PF12146 Serine aminopeptidase, S33 GNE05_00725 PF00338 Ribosomal protein S10p/S20e GNE05_00730 PF00297 Ribosomal protein L3 GNE05_00735 PF00573 Ribosomal protein L4/L1 family GNE05_00740 PF00276 Ribosomal protein L23 GNE05_00745 PF03947 Ribosomal Proteins L2, C-terminal domain GNE05_00745 PF00181 Ribosomal Proteins L2, RNA binding domain GNE05_00750 PF00203 Ribosomal protein S19 GNE05_00755 PF00237 Ribosomal protein L22p/L17e GNE05_00760 PF07650 KH domain GNE05_00760 PF00189 Ribosomal protein S3, C-terminal domain GNE05_00765 PF00252 Ribosomal protein L16p/L10e GNE05_00770 PF00831 Ribosomal L29 protein GNE05_00775 PF00366 Ribosomal protein S17 GNE05_00780 PF00238 Ribosomal protein L14p/L23e GNE05_00785 PF00467 KOW motif GNE05_00785 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GNE05_00790 PF00281 Ribosomal protein L5 GNE05_00790 PF00673 ribosomal L5P family C-terminus GNE05_00795 PF00253 Ribosomal protein S14p/S29e GNE05_00800 PF00410 Ribosomal protein S8 GNE05_00805 PF00347 Ribosomal protein L6 GNE05_00810 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GNE05_00815 PF00333 Ribosomal protein S5, N-terminal domain GNE05_00815 PF03719 Ribosomal protein S5, C-terminal domain GNE05_00820 PF00327 Ribosomal protein L30p/L7e GNE05_00825 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GNE05_00830 PF00344 SecY translocase GNE05_00835 PF05191 Adenylate kinase, active site lid GNE05_00840 PF00557 Metallopeptidase family M24 GNE05_00850 PF01176 Translation initiation factor 1A / IF-1 GNE05_00855 PF00444 Ribosomal protein L36 GNE05_00860 PF00416 Ribosomal protein S13/S18 GNE05_00865 PF00411 Ribosomal protein S11 GNE05_00870 PF01000 RNA polymerase Rpb3/RpoA insert domain GNE05_00870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GNE05_00870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GNE05_00875 PF01196 Ribosomal protein L17 GNE05_00880 PF00005 ABC transporter GNE05_00885 PF00005 ABC transporter GNE05_00890 PF02361 Cobalt transport protein GNE05_00895 PF01416 tRNA pseudouridine synthase GNE05_00900 PF00572 Ribosomal protein L13 GNE05_00905 PF00380 Ribosomal protein S9/S16 GNE05_00910 PF08241 Methyltransferase domain GNE05_00915 PF05163 DinB family GNE05_00920 PF10730 Protein of unknown function (DUF2521) GNE05_00925 PF01520 N-acetylmuramoyl-L-alanine amidase GNE05_00930 PF10609 NUBPL iron-transfer P-loop NTPase GNE05_00935 PF17898 Spore germination GerD central core domain GNE05_00940 PF14089 KinB-signalling pathway activation in sporulation GNE05_00945 PF01522 Polysaccharide deacetylase GNE05_00980 PF06114 IrrE N-terminal-like domain GNE05_00990 PF01381 Helix-turn-helix GNE05_01055 PF00772 DnaB-like helicase N terminal domain GNE05_01055 PF03796 DnaB-like helicase C terminal domain GNE05_01065 PF05866 Endodeoxyribonuclease RusA GNE05_01160 PF17288 Terminase RNAseH like domain GNE05_01160 PF04466 Phage terminase large subunit GNE05_01165 PF04860 Phage portal protein GNE05_01170 PF04233 Phage Mu protein F like protein GNE05_01180 PF14550 Putative phage serine protease XkdF GNE05_01185 PF05065 Phage capsid family GNE05_01190 PF14553 YqbF, hypothetical protein domain GNE05_01195 PF11436 Protein of unknown function (DUF3199) GNE05_01200 PF12206 Domain of unknown function (DUF3599) GNE05_01205 PF04883 Bacteriophage HK97-gp10, putative tail-component GNE05_01220 PF17481 Phage tail sheath protein beta-sandwich domain GNE05_01220 PF17482 Phage tail sheath C-terminal domain GNE05_01220 PF04984 Phage tail sheath protein subtilisin-like domain GNE05_01225 PF09393 Phage tail tube protein GNE05_01235 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GNE05_01240 PF01464 Transglycosylase SLT domain GNE05_01245 PF01476 LysM domain GNE05_01255 PF10844 Protein of unknown function (DUF2577) GNE05_01260 PF10934 Protein of unknown function (DUF2634) GNE05_01265 PF04865 Baseplate J-like protein GNE05_01270 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GNE05_01285 PF09636 XkdW protein GNE05_01290 PF09693 Phage uncharacterised protein (Phage_XkdX) GNE05_01300 PF10779 Haemolysin XhlA GNE05_01305 PF04688 SPP1 phage holin GNE05_01310 PF01510 N-acetylmuramoyl-L-alanine amidase GNE05_01310 PF01471 Putative peptidoglycan binding domain GNE05_01320 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_01320 PF13176 Tetratricopeptide repeat GNE05_01325 PF00717 Peptidase S24-like GNE05_01325 PF01726 LexA DNA binding domain GNE05_01360 PF07690 Major Facilitator Superfamily GNE05_01365 PF00202 Aminotransferase class-III GNE05_01375 PF00107 Zinc-binding dehydrogenase GNE05_01375 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_01380 PF00916 Sulfate permease family GNE05_01380 PF01740 STAS domain GNE05_01385 PF01758 Sodium Bile acid symporter family GNE05_01390 PF00756 Putative esterase GNE05_01395 PF01032 FecCD transport family GNE05_01400 PF01032 FecCD transport family GNE05_01405 PF01497 Periplasmic binding protein GNE05_01410 PF01497 Periplasmic binding protein GNE05_01410 PF12833 Helix-turn-helix domain GNE05_01415 PF07075 Protein of unknown function (DUF1343) GNE05_01420 PF00933 Glycosyl hydrolase family 3 N terminal domain GNE05_01420 PF01915 Glycosyl hydrolase family 3 C-terminal domain GNE05_01425 PF00144 Beta-lactamase GNE05_01430 PF00367 phosphotransferase system, EIIB GNE05_01430 PF02378 Phosphotransferase system, EIIC GNE05_01435 PF01380 SIS domain GNE05_01445 PF04463 Protein of unknown function (DUF523) GNE05_01475 PF04542 Sigma-70 region 2 GNE05_01475 PF08281 Sigma-70, region 4 GNE05_01480 PF13490 Putative zinc-finger GNE05_01485 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNE05_01490 PF07949 YbbR-like protein GNE05_01495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNE05_01495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNE05_01495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNE05_01495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNE05_01500 PF01380 SIS domain GNE05_01515 PF00005 ABC transporter GNE05_01530 PF16226 Domain of unknown function (DUF4885) GNE05_01535 PF00248 Aldo/keto reductase family GNE05_01540 PF04172 LrgB-like family GNE05_01545 PF03788 LrgA family GNE05_01550 PF01047 MarR family GNE05_01555 PF00324 Amino acid permease GNE05_01560 PF13419 Haloacid dehalogenase-like hydrolase GNE05_01565 PF07730 Histidine kinase GNE05_01570 PF00196 Bacterial regulatory proteins, luxR family GNE05_01570 PF00072 Response regulator receiver domain GNE05_01575 PF00005 ABC transporter GNE05_01600 PF17334 Minor curli fiber component A GNE05_01615 PF13520 Amino acid permease GNE05_01620 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 GNE05_01620 PF00535 Glycosyl transferase family 2 GNE05_01635 PF10852 Protein of unknown function (DUF2651) GNE05_01640 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE05_01645 PF07690 Major Facilitator Superfamily GNE05_01650 PF10852 Protein of unknown function (DUF2651) GNE05_01655 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GNE05_01655 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GNE05_01665 PF01471 Putative peptidoglycan binding domain GNE05_01665 PF08924 Domain of unknown function (DUF1906) GNE05_01680 PF00465 Iron-containing alcohol dehydrogenase GNE05_01685 PF02222 ATP-grasp domain GNE05_01690 PF01066 CDP-alcohol phosphatidyltransferase GNE05_01695 PF09335 SNARE associated Golgi protein GNE05_01700 PF02666 Phosphatidylserine decarboxylase GNE05_01715 PF00375 Sodium:dicarboxylate symporter family GNE05_01720 PF01063 Amino-transferase class IV GNE05_01725 PF00324 Amino acid permease GNE05_01730 PF02574 Homocysteine S-methyltransferase GNE05_01735 PF01235 Sodium:alanine symporter family GNE05_01740 PF04960 Glutaminase GNE05_01745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_01750 PF00072 Response regulator receiver domain GNE05_01750 PF08664 YcbB domain GNE05_01755 PF01636 Phosphotransferase enzyme family GNE05_01760 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein GNE05_01765 PF10710 Protein of unknown function (DUF2512) GNE05_01770 PF07486 Cell Wall Hydrolase GNE05_01775 PF16655 PhoD-like phosphatase, N-terminal domain GNE05_01775 PF09423 PhoD-like phosphatase GNE05_01780 PF02416 mttA/Hcf106 family GNE05_01785 PF00902 Sec-independent protein translocase protein (TatC) GNE05_01790 PF01470 Pyroglutamyl peptidase GNE05_01795 PF00266 Aminotransferase class-V GNE05_01800 PF07690 Major Facilitator Superfamily GNE05_01805 PF00440 Bacterial regulatory proteins, tetR family GNE05_01810 PF17763 Glutaminase/Asparaginase C-terminal domain GNE05_01810 PF00710 Asparaginase, N-terminal GNE05_01815 PF01674 Lipase (class 2) GNE05_01820 PF05225 helix-turn-helix, Psq domain GNE05_01820 PF02810 SEC-C motif GNE05_01825 PF00248 Aldo/keto reductase family GNE05_01830 PF11611 Domain of unknown function (DUF4352) GNE05_01830 PF17118 Domain of unknown function (DUF5105) GNE05_01835 PF16244 Domain of unknown function (DUF4901) GNE05_01840 PF16244 Domain of unknown function (DUF4901) GNE05_01845 PF13539 D-alanyl-D-alanine carboxypeptidase GNE05_01850 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_01860 PF00128 Alpha amylase, catalytic domain GNE05_01865 PF01297 Zinc-uptake complex component A periplasmic GNE05_01870 PF00005 ABC transporter GNE05_01875 PF00950 ABC 3 transport family GNE05_01880 PF00296 Luciferase-like monooxygenase GNE05_01885 PF02342 TerD domain GNE05_01890 PF02342 TerD domain GNE05_01895 PF02342 TerD domain GNE05_01900 PF03741 Integral membrane protein TerC family GNE05_01905 PF14266 Putative component of 'biosynthetic module' GNE05_01910 PF05816 Toxic anion resistance protein (TelA) GNE05_01915 PF07690 Major Facilitator Superfamily GNE05_01920 PF00571 CBS domain GNE05_01920 PF00005 ABC transporter GNE05_01925 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_01930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNE05_01935 PF07687 Peptidase dimerisation domain GNE05_01935 PF01546 Peptidase family M20/M25/M40 GNE05_01940 PF03606 C4-dicarboxylate anaerobic carrier GNE05_01950 PF16738 Starch-binding module 26 GNE05_01950 PF00128 Alpha amylase, catalytic domain GNE05_01955 PF00056 lactate/malate dehydrogenase, NAD binding domain GNE05_01955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNE05_01960 PF07690 Major Facilitator Superfamily GNE05_01965 PF01047 MarR family GNE05_01970 PF01810 LysE type translocator GNE05_01975 PF08892 YqcI/YcgG family GNE05_01980 PF00324 Amino acid permease GNE05_01985 PF09347 Domain of unknown function (DUF1989) GNE05_01990 PF02540 NAD synthase GNE05_01995 PF12197 Bacillus cereus group antimicrobial protein GNE05_02005 PF01261 Xylose isomerase-like TIM barrel GNE05_02010 PF07690 Major Facilitator Superfamily GNE05_02015 PF01202 Shikimate kinase GNE05_02020 PF05448 Acetyl xylan esterase (AXE1) GNE05_02025 PF10127 RNA repair pathway DNA polymerase beta family GNE05_02030 PF01619 Proline dehydrogenase GNE05_02035 PF00171 Aldehyde dehydrogenase family GNE05_02040 PF00474 Sodium:solute symporter family GNE05_02045 PF17853 GGDEF-like domain GNE05_02045 PF13556 PucR C-terminal helix-turn-helix domain GNE05_02050 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_02055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE05_02060 PF00355 Rieske [2Fe-2S] domain GNE05_02065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNE05_02065 PF04324 BFD-like [2Fe-2S] binding domain GNE05_02065 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_02065 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNE05_02065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNE05_02070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNE05_02070 PF01568 Molydopterin dinucleotide binding domain GNE05_02070 PF00384 Molybdopterin oxidoreductase GNE05_02075 PF18267 Rubredoxin NAD+ reductase C-terminal domain GNE05_02075 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_02075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNE05_02075 PF04324 BFD-like [2Fe-2S] binding domain GNE05_02080 PF07690 Major Facilitator Superfamily GNE05_02085 PF02492 CobW/HypB/UreG, nucleotide-binding domain GNE05_02085 PF07683 Cobalamin synthesis protein cobW C-terminal domain GNE05_02090 PF13823 Alcohol dehydrogenase GroES-associated GNE05_02090 PF00107 Zinc-binding dehydrogenase GNE05_02090 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_02095 PF06271 RDD family GNE05_02100 PF10925 Protein of unknown function (DUF2680) GNE05_02105 PF00232 Glycosyl hydrolase family 1 GNE05_02110 PF11033 Competence protein J (ComJ) GNE05_02115 PF14040 Deoxyribonuclease NucA/NucB GNE05_02120 PF01380 SIS domain GNE05_02125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GNE05_02130 PF01638 HxlR-like helix-turn-helix GNE05_02135 PF13193 AMP-binding enzyme C-terminal domain GNE05_02135 PF00668 Condensation domain GNE05_02135 PF00550 Phosphopantetheine attachment site GNE05_02135 PF00501 AMP-binding enzyme GNE05_02140 PF00668 Condensation domain GNE05_02140 PF13193 AMP-binding enzyme C-terminal domain GNE05_02140 PF00501 AMP-binding enzyme GNE05_02140 PF00550 Phosphopantetheine attachment site GNE05_02145 PF00975 Thioesterase domain GNE05_02145 PF13193 AMP-binding enzyme C-terminal domain GNE05_02145 PF00501 AMP-binding enzyme GNE05_02145 PF00550 Phosphopantetheine attachment site GNE05_02145 PF00668 Condensation domain GNE05_02150 PF00975 Thioesterase domain GNE05_02160 PF01648 4'-phosphopantetheinyl transferase superfamily GNE05_02170 PF00005 ABC transporter GNE05_02175 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_02180 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE05_02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_02185 PF03466 LysR substrate binding domain GNE05_02190 PF02441 Flavoprotein GNE05_02195 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GNE05_02210 PF00854 POT family GNE05_02215 PF12708 Pectate lyase superfamily protein GNE05_02215 PF13229 Right handed beta helix region GNE05_02225 PF03323 Bacillus/Clostridium GerA spore germination protein GNE05_02230 PF05504 Spore germination B3/ GerAC like, C-terminal GNE05_02235 PF03845 Spore germination protein GNE05_02240 PF00296 Luciferase-like monooxygenase GNE05_02245 PF00583 Acetyltransferase (GNAT) family GNE05_02250 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE05_02255 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_02260 PF00005 ABC transporter GNE05_02265 PF01546 Peptidase family M20/M25/M40 GNE05_02265 PF07687 Peptidase dimerisation domain GNE05_02270 PF03972 MmgE/PrpD family GNE05_02275 PF00005 ABC transporter GNE05_02280 PF12704 MacB-like periplasmic core domain GNE05_02280 PF02687 FtsX-like permease family GNE05_02285 PF00072 Response regulator receiver domain GNE05_02285 PF00486 Transcriptional regulatory protein, C terminal GNE05_02290 PF00512 His Kinase A (phospho-acceptor) domain GNE05_02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_02290 PF00672 HAMP domain GNE05_02295 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_02300 PF11131 Rap-phr extracellular signalling GNE05_02305 PF09680 Family of unknown function GNE05_02310 PF13840 ACT domain GNE05_02310 PF00696 Amino acid kinase family GNE05_02315 PF01032 FecCD transport family GNE05_02320 PF01032 FecCD transport family GNE05_02325 PF00005 ABC transporter GNE05_02330 PF01497 Periplasmic binding protein GNE05_02335 PF07690 Major Facilitator Superfamily GNE05_02340 PF00440 Bacterial regulatory proteins, tetR family GNE05_02345 PF00881 Nitroreductase family GNE05_02350 PF03992 Antibiotic biosynthesis monooxygenase GNE05_02355 PF01022 Bacterial regulatory protein, arsR family GNE05_02360 PF00392 Bacterial regulatory proteins, gntR family GNE05_02360 PF00155 Aminotransferase class I and II GNE05_02365 PF00202 Aminotransferase class-III GNE05_02370 PF00171 Aldehyde dehydrogenase family GNE05_02375 PF06800 Sugar transport protein GNE05_02385 PF07987 Domain of unkown function (DUF1775) GNE05_02390 PF13115 YtkA-like GNE05_02390 PF05425 Copper resistance protein D GNE05_02390 PF04234 CopC domain GNE05_02395 PF08220 DeoR-like helix-turn-helix domain GNE05_02395 PF05573 NosL GNE05_02405 PF02378 Phosphotransferase system, EIIC GNE05_02405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE05_02410 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE05_02415 PF08125 Mannitol dehydrogenase C-terminal domain GNE05_02415 PF01232 Mannitol dehydrogenase Rossmann domain GNE05_02420 PF07977 FabA-like domain GNE05_02435 PF03746 LamB/YcsF family GNE05_02440 PF01566 Natural resistance-associated macrophage protein GNE05_02445 PF07286 Protein of unknown function (DUF1445) GNE05_02450 PF02682 Carboxyltransferase domain, subdomain C and D GNE05_02455 PF02626 Carboxyltransferase domain, subdomain A and B GNE05_02460 PF01614 Bacterial transcriptional regulator GNE05_02460 PF09339 IclR helix-turn-helix domain GNE05_02465 PF13472 GDSL-like Lipase/Acylhydrolase family GNE05_02470 PF13129 Protein of unknown function (DUF3953) GNE05_02475 PF03992 Antibiotic biosynthesis monooxygenase GNE05_02480 PF00905 Penicillin binding protein transpeptidase domain GNE05_02480 PF03717 Penicillin-binding Protein dimerisation domain GNE05_02480 PF05223 NTF2-like N-terminal transpeptidase domain GNE05_02485 PF00248 Aldo/keto reductase family GNE05_02490 PF08279 HTH domain GNE05_02490 PF00874 PRD domain GNE05_02490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE05_02490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE05_02490 PF05043 Mga helix-turn-helix domain GNE05_02495 PF00501 AMP-binding enzyme GNE05_02495 PF13193 AMP-binding enzyme C-terminal domain GNE05_02510 PF13302 Acetyltransferase (GNAT) domain GNE05_02515 PF16242 Pyridoxamine 5'-phosphate oxidase like GNE05_02520 PF10997 Alternate to MurJ GNE05_02525 PF12823 Domain of unknown function (DUF3817) GNE05_02530 PF01037 Lrp/AsnC ligand binding domain GNE05_02535 PF01131 DNA topoisomerase GNE05_02535 PF01751 Toprim domain GNE05_02545 PF00990 Diguanylate cyclase, GGDEF domain GNE05_02550 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) GNE05_02560 PF03170 Bacterial cellulose synthase subunit GNE05_02565 PF13520 Amino acid permease GNE05_02570 PF00293 NUDIX domain GNE05_02575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE05_02575 PF00205 Thiamine pyrophosphate enzyme, central domain GNE05_02575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE05_02595 PF09346 SMI1 / KNR4 family (SUKH-1) GNE05_02605 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_02605 PF13176 Tetratricopeptide repeat GNE05_02630 PF01566 Natural resistance-associated macrophage protein GNE05_02640 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GNE05_02645 PF17314 Family of unknown function (DUF5360) GNE05_02650 PF00893 Small Multidrug Resistance protein GNE05_02655 PF12787 EcsC protein family GNE05_02665 PF07883 Cupin domain GNE05_02670 PF16291 Domain of unknown function (DUF4937 GNE05_02675 PF05067 Manganese containing catalase GNE05_02680 PF03480 Bacterial extracellular solute-binding protein, family 7 GNE05_02685 PF17203 Single cache domain 3 GNE05_02685 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNE05_02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_02690 PF00072 Response regulator receiver domain GNE05_02690 PF08279 HTH domain GNE05_02695 PF00375 Sodium:dicarboxylate symporter family GNE05_02700 PF01594 AI-2E family transporter GNE05_02705 PF00005 ABC transporter GNE05_02720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE05_02720 PF02770 Acyl-CoA dehydrogenase, middle domain GNE05_02720 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GNE05_02725 PF13040 Fur-regulated basic protein B GNE05_02735 PF01545 Cation efflux family GNE05_02735 PF16916 Dimerisation domain of Zinc Transporter GNE05_02740 PF00085 Thioredoxin GNE05_02745 PF07478 D-ala D-ala ligase C-terminus GNE05_02745 PF01820 D-ala D-ala ligase N-terminus GNE05_02750 PF01225 Mur ligase family, catalytic domain GNE05_02750 PF08245 Mur ligase middle domain GNE05_02750 PF02875 Mur ligase family, glutamate ligase domain GNE05_02755 PF00270 DEAD/DEAH box helicase GNE05_02755 PF00271 Helicase conserved C-terminal domain GNE05_02760 PF03703 Bacterial PH domain GNE05_02765 PF03703 Bacterial PH domain GNE05_02770 PF01694 Rhomboid family GNE05_02775 PF01648 4'-phosphopantetheinyl transferase superfamily GNE05_02785 PF01168 Alanine racemase, N-terminal domain GNE05_02785 PF00842 Alanine racemase, C-terminal domain GNE05_02790 PF01402 Ribbon-helix-helix protein, copG family GNE05_02795 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GNE05_02800 PF08678 Rsbr N terminal GNE05_02800 PF01740 STAS domain GNE05_02805 PF01740 STAS domain GNE05_02810 PF13581 Histidine kinase-like ATPase domain GNE05_02815 PF07228 Stage II sporulation protein E (SpoIIE) GNE05_02815 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain GNE05_02820 PF01740 STAS domain GNE05_02825 PF13581 Histidine kinase-like ATPase domain GNE05_02830 PF04545 Sigma-70, region 4 GNE05_02830 PF04542 Sigma-70 region 2 GNE05_02830 PF04539 Sigma-70 region 3 GNE05_02835 PF07228 Stage II sporulation protein E (SpoIIE) GNE05_02840 PF00575 S1 RNA binding domain GNE05_02840 PF16921 Tex protein YqgF-like domain GNE05_02840 PF09371 Tex-like protein N-terminal domain GNE05_02840 PF17674 HHH domain GNE05_02850 PF10263 SprT-like family GNE05_02890 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_02895 PF02028 BCCT, betaine/carnitine/choline family transporter GNE05_02900 PF07690 Major Facilitator Superfamily GNE05_02915 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) GNE05_02920 PF01575 MaoC like domain GNE05_02935 PF02082 Transcriptional regulator GNE05_02940 PF13460 NAD(P)H-binding GNE05_02945 PF00487 Fatty acid desaturase GNE05_02955 PF00313 'Cold-shock' DNA-binding domain GNE05_02960 PF02559 CarD-like/TRCF domain GNE05_02965 PF02583 Metal-sensitive transcriptional repressor GNE05_02970 PF13686 DsrE/DsrF/DrsH-like family GNE05_02980 PF00581 Rhodanese-like domain GNE05_02980 PF01206 Sulfurtransferase TusA GNE05_02985 PF00753 Metallo-beta-lactamase superfamily GNE05_02985 PF00581 Rhodanese-like domain GNE05_02990 PF01206 Sulfurtransferase TusA GNE05_02995 PF01925 Sulfite exporter TauE/SafE GNE05_03000 PF01177 Asp/Glu/Hydantoin racemase GNE05_03015 PF01734 Patatin-like phospholipase GNE05_03025 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_03030 PF00392 Bacterial regulatory proteins, gntR family GNE05_03030 PF07729 FCD domain GNE05_03035 PF01042 Endoribonuclease L-PSP GNE05_03045 PF07687 Peptidase dimerisation domain GNE05_03045 PF01546 Peptidase family M20/M25/M40 GNE05_03050 PF02311 AraC-like ligand binding domain GNE05_03050 PF12833 Helix-turn-helix domain GNE05_03055 PF01546 Peptidase family M20/M25/M40 GNE05_03055 PF07687 Peptidase dimerisation domain GNE05_03060 PF00155 Aminotransferase class I and II GNE05_03060 PF00392 Bacterial regulatory proteins, gntR family GNE05_03065 PF07690 Major Facilitator Superfamily GNE05_03070 PF13344 Haloacid dehalogenase-like hydrolase GNE05_03070 PF00293 NUDIX domain GNE05_03085 PF01565 FAD binding domain GNE05_03085 PF08031 Berberine and berberine like GNE05_03090 PF16916 Dimerisation domain of Zinc Transporter GNE05_03090 PF01545 Cation efflux family GNE05_03130 PF13649 Methyltransferase domain GNE05_03135 PF08543 Phosphomethylpyrimidine kinase GNE05_03140 PF00293 NUDIX domain GNE05_03140 PF13344 Haloacid dehalogenase-like hydrolase GNE05_03150 PF00107 Zinc-binding dehydrogenase GNE05_03150 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_03155 PF13411 MerR HTH family regulatory protein GNE05_03165 PF00155 Aminotransferase class I and II GNE05_03165 PF00392 Bacterial regulatory proteins, gntR family GNE05_03180 PF07690 Major Facilitator Superfamily GNE05_03185 PF16859 Tetracyclin repressor-like, C-terminal domain GNE05_03185 PF00440 Bacterial regulatory proteins, tetR family GNE05_03190 PF00892 EamA-like transporter family GNE05_03195 PF00155 Aminotransferase class I and II GNE05_03195 PF00392 Bacterial regulatory proteins, gntR family GNE05_03200 PF07875 Coat F domain GNE05_03210 PF00107 Zinc-binding dehydrogenase GNE05_03210 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_03210 PF13823 Alcohol dehydrogenase GroES-associated GNE05_03215 PF07875 Coat F domain GNE05_03225 PF07690 Major Facilitator Superfamily GNE05_03240 PF00132 Bacterial transferase hexapeptide (six repeats) GNE05_03240 PF14602 Hexapeptide repeat of succinyl-transferase GNE05_03240 PF12464 Maltose acetyltransferase GNE05_03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_03245 PF07730 Histidine kinase GNE05_03250 PF00196 Bacterial regulatory proteins, luxR family GNE05_03250 PF00072 Response regulator receiver domain GNE05_03255 PF03176 MMPL family GNE05_03260 PF07722 Peptidase C26 GNE05_03270 PF13302 Acetyltransferase (GNAT) domain GNE05_03275 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE05_03275 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_03280 PF00465 Iron-containing alcohol dehydrogenase GNE05_03285 PF07690 Major Facilitator Superfamily GNE05_03290 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_03290 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_03300 PF01925 Sulfite exporter TauE/SafE GNE05_03305 PF00583 Acetyltransferase (GNAT) family GNE05_03310 PF13411 MerR HTH family regulatory protein GNE05_03310 PF06445 GyrI-like small molecule binding domain GNE05_03315 PF00892 EamA-like transporter family GNE05_03320 PF00293 NUDIX domain GNE05_03325 PF08241 Methyltransferase domain GNE05_03330 PF00180 Isocitrate/isopropylmalate dehydrogenase GNE05_03335 PF07729 FCD domain GNE05_03335 PF00392 Bacterial regulatory proteins, gntR family GNE05_03340 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GNE05_03355 PF11954 Domain of unknown function (DUF3471) GNE05_03355 PF00144 Beta-lactamase GNE05_03360 PF07563 Protein of unknown function (DUF1541) GNE05_03365 PF07690 Major Facilitator Superfamily GNE05_03370 PF00392 Bacterial regulatory proteins, gntR family GNE05_03370 PF07702 UTRA domain GNE05_03375 PF07729 FCD domain GNE05_03375 PF00392 Bacterial regulatory proteins, gntR family GNE05_03380 PF07690 Major Facilitator Superfamily GNE05_03385 PF00893 Small Multidrug Resistance protein GNE05_03390 PF00893 Small Multidrug Resistance protein GNE05_03395 PF00440 Bacterial regulatory proteins, tetR family GNE05_03395 PF17934 Tetracyclin repressor-like, C-terminal domain GNE05_03400 PF13520 Amino acid permease GNE05_03410 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GNE05_03415 PF00107 Zinc-binding dehydrogenase GNE05_03415 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_03420 PF00083 Sugar (and other) transporter GNE05_03460 PF00586 AIR synthase related protein, N-terminal domain GNE05_03460 PF02769 AIR synthase related protein, C-terminal domain GNE05_03465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GNE05_03470 PF00814 Glycoprotease family GNE05_03475 PF00583 Acetyltransferase (GNAT) family GNE05_03480 PF00814 Glycoprotease family GNE05_03485 PF12848 ABC transporter GNE05_03485 PF00005 ABC transporter GNE05_03485 PF16326 ABC transporter C-terminal domain GNE05_03490 PF01967 MoaC family GNE05_03495 PF02629 CoA binding domain GNE05_03495 PF06971 Putative DNA-binding protein N-terminus GNE05_03500 PF02416 mttA/Hcf106 family GNE05_03505 PF00902 Sec-independent protein translocase protein (TatC) GNE05_03510 PF14146 Domain of unknown function (DUF4305) GNE05_03515 PF02517 CPBP intramembrane metalloprotease GNE05_03520 PF00166 Chaperonin 10 Kd subunit GNE05_03525 PF00118 TCP-1/cpn60 chaperonin family GNE05_03530 PF01546 Peptidase family M20/M25/M40 GNE05_03530 PF07687 Peptidase dimerisation domain GNE05_03565 PF00881 Nitroreductase family GNE05_03575 PF00005 ABC transporter GNE05_03585 PF13176 Tetratricopeptide repeat GNE05_03585 PF00931 NB-ARC domain GNE05_03590 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_03590 PF00107 Zinc-binding dehydrogenase GNE05_03600 PF00294 pfkB family carbohydrate kinase GNE05_03605 PF14154 Domain of unknown function (DUF4306) GNE05_03610 PF04012 PspA/IM30 family GNE05_03615 PF08271 TFIIB zinc-binding GNE05_03620 PF04536 TPM domain GNE05_03625 PF13421 SPFH domain-Band 7 family GNE05_03630 PF01757 Acyltransferase family GNE05_03635 PF13739 Deacetylase PdaC GNE05_03635 PF11738 Protein of unknown function (DUF3298) GNE05_03640 PF04542 Sigma-70 region 2 GNE05_03640 PF08281 Sigma-70, region 4 GNE05_03645 PF00107 Zinc-binding dehydrogenase GNE05_03645 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_03650 PF03330 Lytic transglycolase GNE05_03655 PF07676 WD40-like Beta Propeller Repeat GNE05_03665 PF14169 Cold-inducible protein YdjO GNE05_03670 PF00394 Multicopper oxidase GNE05_03670 PF07731 Multicopper oxidase GNE05_03670 PF07732 Multicopper oxidase GNE05_03675 PF00324 Amino acid permease GNE05_03680 PF01545 Cation efflux family GNE05_03680 PF16916 Dimerisation domain of Zinc Transporter GNE05_03685 PF17863 AAA lid domain GNE05_03685 PF07726 ATPase family associated with various cellular activities (AAA) GNE05_03690 PF01882 Protein of unknown function DUF58 GNE05_03695 PF01841 Transglutaminase-like superfamily GNE05_03695 PF13559 Domain of unknown function (DUF4129) GNE05_03695 PF11992 Domain of unknown function (DUF3488) GNE05_03700 PF00117 Glutamine amidotransferase class-I GNE05_03700 PF02540 NAD synthase GNE05_03700 PF00958 GMP synthase C terminal domain GNE05_03705 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GNE05_03705 PF02142 MGS-like domain GNE05_03705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE05_03710 PF02655 ATP-grasp domain GNE05_03710 PF00206 Lyase GNE05_03720 PF00155 Aminotransferase class I and II GNE05_03725 PF07690 Major Facilitator Superfamily GNE05_03730 PF04545 Sigma-70, region 4 GNE05_03730 PF04542 Sigma-70 region 2 GNE05_03740 PF00860 Permease family GNE05_03750 PF13076 Fur-regulated basic protein A GNE05_03755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_03760 PF14044 NETI protein GNE05_03765 PF00731 AIR carboxylase GNE05_03770 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GNE05_03770 PF02222 ATP-grasp domain GNE05_03775 PF00206 Lyase GNE05_03775 PF10397 Adenylosuccinate lyase C-terminus GNE05_03780 PF01259 SAICAR synthetase GNE05_03785 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GNE05_03795 PF00586 AIR synthase related protein, N-terminal domain GNE05_03795 PF02769 AIR synthase related protein, C-terminal domain GNE05_03795 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GNE05_03800 PF00156 Phosphoribosyl transferase domain GNE05_03805 PF02769 AIR synthase related protein, C-terminal domain GNE05_03805 PF00586 AIR synthase related protein, N-terminal domain GNE05_03810 PF00551 Formyl transferase GNE05_03815 PF02142 MGS-like domain GNE05_03815 PF01808 AICARFT/IMPCHase bienzyme GNE05_03820 PF02843 Phosphoribosylglycinamide synthetase, C domain GNE05_03820 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GNE05_03820 PF02844 Phosphoribosylglycinamide synthetase, N domain GNE05_03825 PF11127 Protein of unknown function (DUF2892) GNE05_03830 PF01979 Amidohydrolase family GNE05_03830 PF13382 Adenine deaminase C-terminal domain GNE05_03835 PF11258 Protein of unknown function (DUF3048) N-terminal domain GNE05_03835 PF17479 Protein of unknown function (DUF3048) C-terminal domain GNE05_03840 PF01371 Trp repressor protein GNE05_03845 PF01645 Conserved region in glutamate synthase GNE05_03850 PF01884 PcrB family GNE05_03855 PF13361 UvrD-like helicase C-terminal domain GNE05_03855 PF00580 UvrD/REP helicase N-terminal domain GNE05_03860 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GNE05_03860 PF00533 BRCA1 C Terminus (BRCT) domain GNE05_03860 PF01653 NAD-dependent DNA ligase adenylation domain GNE05_03860 PF12826 Helix-hairpin-helix motif GNE05_03860 PF03120 NAD-dependent DNA ligase OB-fold domain GNE05_03865 PF07537 CamS sex pheromone cAM373 precursor GNE05_03870 PF01636 Phosphotransferase enzyme family GNE05_03875 PF02308 MgtC family GNE05_03880 PF00474 Sodium:solute symporter family GNE05_03885 PF02686 Glu-tRNAGln amidotransferase C subunit GNE05_03890 PF01425 Amidase GNE05_03895 PF02637 GatB domain GNE05_03895 PF02934 GatB/GatE catalytic domain GNE05_03900 PF00440 Bacterial regulatory proteins, tetR family GNE05_03905 PF00873 AcrB/AcrD/AcrF family GNE05_03910 PF00781 Diacylglycerol kinase catalytic domain GNE05_03915 PF05958 tRNA (Uracil-5-)-methyltransferase GNE05_03915 PF01938 TRAM domain GNE05_03935 PF04634 Protein of unknown function, DUF600 GNE05_03940 PF04634 Protein of unknown function, DUF600 GNE05_03945 PF04634 Protein of unknown function, DUF600 GNE05_03950 PF04634 Protein of unknown function, DUF600 GNE05_03955 PF04740 LXG domain of WXG superfamily GNE05_03960 PF18593 CdiI immunity protein GNE05_03965 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GNE05_03965 PF04740 LXG domain of WXG superfamily GNE05_03970 PF01709 Transcriptional regulator GNE05_03980 PF11007 Spore coat associated protein JA (CotJA) GNE05_03985 PF12652 CotJB protein GNE05_03990 PF05067 Manganese containing catalase GNE05_03995 PF00583 Acetyltransferase (GNAT) family GNE05_04005 PF04239 Protein of unknown function (DUF421) GNE05_04010 PF03992 Antibiotic biosynthesis monooxygenase GNE05_04015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_04020 PF01740 STAS domain GNE05_04020 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GNE05_04025 PF10055 Uncharacterized small protein (DUF2292) GNE05_04030 PF01687 Riboflavin kinase GNE05_04035 PF01027 Inhibitor of apoptosis-promoting Bax1 GNE05_04040 PF01047 MarR family GNE05_04045 PF01494 FAD binding domain GNE05_04050 PF13037 Domain of unknown function (DUF3898) GNE05_04050 PF13039 Protein of unknown function (DUF3900) GNE05_04055 PF00667 FAD binding domain GNE05_04055 PF00258 Flavodoxin GNE05_04055 PF00067 Cytochrome P450 GNE05_04055 PF00175 Oxidoreductase NAD-binding domain GNE05_04060 PF00884 Sulfatase GNE05_04065 PF00483 Nucleotidyl transferase GNE05_04070 PF16363 GDP-mannose 4,6 dehydratase GNE05_04075 PF03407 Nucleotide-diphospho-sugar transferase GNE05_04080 PF00535 Glycosyl transferase family 2 GNE05_04085 PF03407 Nucleotide-diphospho-sugar transferase GNE05_04090 PF07690 Major Facilitator Superfamily GNE05_04095 PF13520 Amino acid permease GNE05_04100 PF00171 Aldehyde dehydrogenase family GNE05_04105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_04115 PF00535 Glycosyl transferase family 2 GNE05_04115 PF13181 Tetratricopeptide repeat GNE05_04120 PF12848 ABC transporter GNE05_04120 PF16326 ABC transporter C-terminal domain GNE05_04120 PF00005 ABC transporter GNE05_04125 PF13411 MerR HTH family regulatory protein GNE05_04130 PF07690 Major Facilitator Superfamily GNE05_04135 PF12848 ABC transporter GNE05_04135 PF00005 ABC transporter GNE05_04140 PF00271 Helicase conserved C-terminal domain GNE05_04140 PF00270 DEAD/DEAH box helicase GNE05_04150 PF16884 N-terminal domain of oxidoreductase GNE05_04150 PF00107 Zinc-binding dehydrogenase GNE05_04155 PF11486 Protein of unknown function (DUF3212) GNE05_04160 PF11181 Heat induced stress protein YflT GNE05_04165 PF00544 Pectate lyase GNE05_04170 PF00939 Sodium:sulfate symporter transmembrane region GNE05_04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_04190 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNE05_04195 PF00072 Response regulator receiver domain GNE05_04195 PF08279 HTH domain GNE05_04195 PF12431 Transcriptional regulator GNE05_04200 PF03401 Tripartite tricarboxylate transporter family receptor GNE05_04205 PF03600 Citrate transporter GNE05_04210 PF00753 Metallo-beta-lactamase superfamily GNE05_04215 PF02898 Nitric oxide synthase, oxygenase domain GNE05_04220 PF00708 Acylphosphatase GNE05_04225 PF03475 3-alpha domain GNE05_04225 PF03473 MOSC domain GNE05_04230 PF11121 Protein of unknown function (DUF2639) GNE05_04240 PF11588 Protein of unknown function (DUF3243) GNE05_04245 PF00557 Metallopeptidase family M24 GNE05_04250 PF00367 phosphotransferase system, EIIB GNE05_04250 PF02378 Phosphotransferase system, EIIC GNE05_04255 PF10787 Uncharacterised protein from bacillus cereus group GNE05_04260 PF00884 Sulfatase GNE05_04265 PF09350 Domain of unknown function (DUF1992) GNE05_04270 PF00011 Hsp20/alpha crystallin family GNE05_04275 PF10676 Spore germination protein gerPA/gerPF GNE05_04280 PF10676 Spore germination protein gerPA/gerPF GNE05_04285 PF00367 phosphotransferase system, EIIB GNE05_04285 PF02378 Phosphotransferase system, EIIC GNE05_04290 PF16657 Maltogenic Amylase, C-terminal domain GNE05_04290 PF00128 Alpha amylase, catalytic domain GNE05_04295 PF00392 Bacterial regulatory proteins, gntR family GNE05_04295 PF07702 UTRA domain GNE05_04300 PF00881 Nitroreductase family GNE05_04315 PF02872 5'-nucleotidase, C-terminal domain GNE05_04315 PF00149 Calcineurin-like phosphoesterase GNE05_04320 PF01965 DJ-1/PfpI family GNE05_04325 PF00356 Bacterial regulatory proteins, lacI family GNE05_04330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GNE05_04330 PF08501 Shikimate dehydrogenase substrate binding domain GNE05_04335 PF01487 Type I 3-dehydroquinase GNE05_04340 PF07690 Major Facilitator Superfamily GNE05_04345 PF06569 Protein of unknown function (DUF1128) GNE05_04350 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNE05_04360 PF03631 Virulence factor BrkB GNE05_04365 PF07690 Major Facilitator Superfamily GNE05_04370 PF01699 Sodium/calcium exchanger protein GNE05_04375 PF14167 YfkD-like protein GNE05_04380 PF00924 Mechanosensitive ion channel GNE05_04385 PF08756 YfkB-like domain GNE05_04385 PF04055 Radical SAM superfamily GNE05_04395 PF01522 Polysaccharide deacetylase GNE05_04400 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNE05_04400 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNE05_04410 PF01544 CorA-like Mg2+ transporter protein GNE05_04415 PF00730 HhH-GPD superfamily base excision DNA repair protein GNE05_04420 PF01938 TRAM domain GNE05_04420 PF05958 tRNA (Uracil-5-)-methyltransferase GNE05_04425 PF14118 YfzA-like protein GNE05_04430 PF01207 Dihydrouridine synthase (Dus) GNE05_04440 PF00676 Dehydrogenase E1 component GNE05_04445 PF02780 Transketolase, C-terminal domain GNE05_04445 PF02779 Transketolase, pyrimidine binding domain GNE05_04450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE05_04450 PF00364 Biotin-requiring enzyme GNE05_04450 PF02817 e3 binding domain GNE05_04455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE05_04455 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_04460 PF00158 Sigma-54 interaction domain GNE05_04460 PF02954 Bacterial regulatory protein, Fis family GNE05_04460 PF01590 GAF domain GNE05_04465 PF08141 Small acid-soluble spore protein H family GNE05_04470 PF11975 Family 4 glycosyl hydrolase C-terminal domain GNE05_04470 PF02056 Family 4 glycosyl hydrolase GNE05_04475 PF01380 SIS domain GNE05_04475 PF01418 Helix-turn-helix domain, rpiR family GNE05_04480 PF00367 phosphotransferase system, EIIB GNE05_04480 PF02378 Phosphotransferase system, EIIC GNE05_04485 PF00005 ABC transporter GNE05_04485 PF00664 ABC transporter transmembrane region GNE05_04490 PF00664 ABC transporter transmembrane region GNE05_04490 PF00005 ABC transporter GNE05_04495 PF07681 DoxX GNE05_04500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_04505 PF02311 AraC-like ligand binding domain GNE05_04505 PF12833 Helix-turn-helix domain GNE05_04510 PF00083 Sugar (and other) transporter GNE05_04515 PF01261 Xylose isomerase-like TIM barrel GNE05_04520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNE05_04520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNE05_04525 PF01040 UbiA prenyltransferase family GNE05_04530 PF10400 Virulence activator alpha C-term GNE05_04530 PF03551 Transcriptional regulator PadR-like family GNE05_04535 PF02525 Flavodoxin-like fold GNE05_04540 PF01757 Acyltransferase family GNE05_04545 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GNE05_04545 PF00391 PEP-utilising enzyme, mobile domain GNE05_04550 PF01337 Barstar (barnase inhibitor) GNE05_04555 PF12867 DinB superfamily GNE05_04560 PF07690 Major Facilitator Superfamily GNE05_04565 PF01047 MarR family GNE05_04570 PF09924 Uncharacterised conserved protein (DUF2156) GNE05_04570 PF03706 Lysylphosphatidylglycerol synthase TM region GNE05_04575 PF02567 Phenazine biosynthesis-like protein GNE05_04580 PF00881 Nitroreductase family GNE05_04585 PF14151 YfhD-like protein GNE05_04590 PF14152 YfhE-like protein GNE05_04595 PF01370 NAD dependent epimerase/dehydratase family GNE05_04595 PF08338 Domain of unknown function (DUF1731) GNE05_04600 PF02631 RecX family GNE05_04605 PF08838 Protein of unknown function (DUF1811) GNE05_04610 PF07690 Major Facilitator Superfamily GNE05_04615 PF10794 Protein of unknown function (DUF2606) GNE05_04620 PF00089 Trypsin GNE05_04625 PF08176 Small acid-soluble spore protein K family GNE05_04630 PF14043 WVELL protein GNE05_04635 PF08239 Bacterial SH3 domain GNE05_04640 PF13630 SdpI/YhfL protein family GNE05_04645 PF00561 alpha/beta hydrolase fold GNE05_04650 PF00535 Glycosyl transferase family 2 GNE05_04655 PF09586 Bacterial membrane protein YfhO GNE05_04660 PF04307 LexA-binding, inner membrane-associated putative hydrolase GNE05_04665 PF14815 NUDIX domain GNE05_04665 PF00730 HhH-GPD superfamily base excision DNA repair protein GNE05_04680 PF04259 Small, acid-soluble spore protein, gamma-type GNE05_04685 PF14182 YgaB-like protein GNE05_04690 PF04167 Protein of unknown function (DUF402) GNE05_04695 PF00005 ABC transporter GNE05_04695 PF00664 ABC transporter transmembrane region GNE05_04700 PF06081 Aromatic acid exporter family member 1 GNE05_04705 PF00202 Aminotransferase class-III GNE05_04710 PF00578 AhpC/TSA family GNE05_04715 PF01475 Ferric uptake regulator family GNE05_04720 PF11023 Zinc-ribbon containing domain GNE05_04725 PF14540 Nucleotidyltransferase-like GNE05_04725 PF18576 Helix-turn-helix domain GNE05_04825 PF03553 Na+/H+ antiporter family GNE05_04830 PF03575 Peptidase family S51 GNE05_04835 PF13667 ThiC-associated domain GNE05_04835 PF01964 Radical SAM ThiC family GNE05_04840 PF01565 FAD binding domain GNE05_04840 PF08031 Berberine and berberine like GNE05_04845 PF13040 Fur-regulated basic protein B GNE05_04850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE05_04855 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_04860 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_04860 PF12911 N-terminal TM domain of oligopeptide transport permease C GNE05_04865 PF00005 ABC transporter GNE05_04865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_04870 PF00005 ABC transporter GNE05_04870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_04875 PF06628 Catalase-related immune-responsive GNE05_04875 PF00199 Catalase GNE05_04885 PF00005 ABC transporter GNE05_04890 PF09084 NMT1/THI5 like GNE05_04895 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_04900 PF00296 Luciferase-like monooxygenase GNE05_04905 PF00253 Ribosomal protein S14p/S29e GNE05_04915 PF01381 Helix-turn-helix GNE05_04930 PF08331 Domain of unknown function (DUF1730) GNE05_04935 PF12671 Putative amidase domain GNE05_04940 PF00588 SpoU rRNA Methylase family GNE05_04945 PF13171 Protein of unknown function (DUF4004) GNE05_04950 PF04519 Polymer-forming cytoskeletal GNE05_04960 PF06798 PrkA serine protein kinase C-terminal domain GNE05_04960 PF08298 PrkA AAA domain GNE05_04965 PF04285 Protein of unknown function (DUF444) GNE05_04970 PF01047 MarR family GNE05_04980 PF07690 Major Facilitator Superfamily GNE05_04985 PF03358 NADPH-dependent FMN reductase GNE05_05000 PF00392 Bacterial regulatory proteins, gntR family GNE05_05005 PF00005 ABC transporter GNE05_05010 PF00005 ABC transporter GNE05_05015 PF12679 ABC-2 family transporter protein GNE05_05020 PF00313 'Cold-shock' DNA-binding domain GNE05_05025 PF03180 NLPA lipoprotein GNE05_05030 PF07694 5TMR of 5TMR-LYT GNE05_05030 PF00990 Diguanylate cyclase, GGDEF domain GNE05_05035 PF00375 Sodium:dicarboxylate symporter family GNE05_05045 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNE05_05055 PF07875 Coat F domain GNE05_05060 PF00746 LPXTG cell wall anchor motif GNE05_05060 PF00149 Calcineurin-like phosphoesterase GNE05_05060 PF00565 Staphylococcal nuclease homologue GNE05_05060 PF02872 5'-nucleotidase, C-terminal domain GNE05_05065 PF04203 Sortase domain GNE05_05070 PF01479 S4 domain GNE05_05070 PF00849 RNA pseudouridylate synthase GNE05_05075 PF17326 Family of unknown function (DUF5365) GNE05_05080 PF00571 CBS domain GNE05_05085 PF13419 Haloacid dehalogenase-like hydrolase GNE05_05090 PF00795 Carbon-nitrogen hydrolase GNE05_05090 PF00583 Acetyltransferase (GNAT) family GNE05_05095 PF00202 Aminotransferase class-III GNE05_05100 PF04309 Glycerol-3-phosphate responsive antiterminator GNE05_05105 PF00230 Major intrinsic protein GNE05_05110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE05_05110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE05_05115 PF01266 FAD dependent oxidoreductase GNE05_05115 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GNE05_05120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GNE05_05120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GNE05_05120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GNE05_05120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GNE05_05125 PF13185 GAF domain GNE05_05125 PF07730 Histidine kinase GNE05_05130 PF00196 Bacterial regulatory proteins, luxR family GNE05_05130 PF00072 Response regulator receiver domain GNE05_05135 PF03358 NADPH-dependent FMN reductase GNE05_05140 PF14148 YhdB-like protein GNE05_05145 PF13028 Protein of unknown function (DUF3889) GNE05_05150 PF01476 LysM domain GNE05_05150 PF00877 NlpC/P60 family GNE05_05155 PF02082 Transcriptional regulator GNE05_05160 PF05552 Conserved TM helix GNE05_05165 PF04293 SpoVR like protein GNE05_05170 PF00245 Alkaline phosphatase GNE05_05175 PF00877 NlpC/P60 family GNE05_05175 PF01476 LysM domain GNE05_05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_05180 PF03466 LysR substrate binding domain GNE05_05185 PF00285 Citrate synthase, C-terminal domain GNE05_05195 PF13520 Amino acid permease GNE05_05200 PF00209 Sodium:neurotransmitter symporter family GNE05_05205 PF17453 Sigma-M inhibitor GNE05_05210 PF13791 Sigma factor regulator C-terminal GNE05_05210 PF13800 Sigma factor regulator N-terminal GNE05_05215 PF08281 Sigma-70, region 4 GNE05_05215 PF04542 Sigma-70 region 2 GNE05_05220 PF01553 Acyltransferase GNE05_05225 PF01595 Cyclin M transmembrane N-terminal domain GNE05_05225 PF03471 Transporter associated domain GNE05_05225 PF00571 CBS domain GNE05_05230 PF13411 MerR HTH family regulatory protein GNE05_05235 PF00155 Aminotransferase class I and II GNE05_05240 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_05240 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_05245 PF03471 Transporter associated domain GNE05_05245 PF01595 Cyclin M transmembrane N-terminal domain GNE05_05245 PF00571 CBS domain GNE05_05250 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GNE05_05255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GNE05_05260 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE05_05265 PF17444 Uncharacterized YhdX-like GNE05_05270 PF00924 Mechanosensitive ion channel GNE05_05275 PF02146 Sir2 family GNE05_05280 PF01522 Polysaccharide deacetylase GNE05_05285 PF01063 Amino-transferase class IV GNE05_05290 PF00440 Bacterial regulatory proteins, tetR family GNE05_05290 PF13977 BetI-type transcriptional repressor, C-terminal GNE05_05300 PF00582 Universal stress protein family GNE05_05305 PF00005 ABC transporter GNE05_05305 PF00664 ABC transporter transmembrane region GNE05_05310 PF00664 ABC transporter transmembrane region GNE05_05310 PF00005 ABC transporter GNE05_05315 PF13460 NAD(P)H-binding GNE05_05320 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE05_05325 PF17277 Family of unknown function (DUF5342) GNE05_05330 PF14398 YheC/D like ATP-grasp GNE05_05335 PF14398 YheC/D like ATP-grasp GNE05_05340 PF04286 Protein of unknown function (DUF445) GNE05_05345 PF06133 Control of competence regulator ComK, YlbF/YmcA GNE05_05360 PF04055 Radical SAM superfamily GNE05_05365 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) GNE05_05370 PF00999 Sodium/hydrogen exchanger family GNE05_05375 PF02080 TrkA-C domain GNE05_05385 PF00378 Enoyl-CoA hydratase/isomerase GNE05_05390 PF14120 YhzD-like protein GNE05_05395 PF13732 Domain of unknown function (DUF4162) GNE05_05395 PF00005 ABC transporter GNE05_05405 PF00149 Calcineurin-like phosphoesterase GNE05_05410 PF13514 AAA domain GNE05_05415 PF01966 HD domain GNE05_05420 PF14147 Sporulation protein YhaL GNE05_05430 PF09680 Family of unknown function GNE05_05435 PF09680 Family of unknown function GNE05_05445 PF11667 Putative zincin peptidase GNE05_05450 PF08963 Protein of unknown function (DUF1878) GNE05_05455 PF01047 MarR family GNE05_05460 PF12732 YtxH-like protein GNE05_05470 PF17099 Tryptophan transporter TrpP GNE05_05475 PF00266 Aminotransferase class-V GNE05_05480 PF01230 HIT domain GNE05_05485 PF00005 ABC transporter GNE05_05490 PF05975 Bacterial ABC transporter protein EcsB GNE05_05495 PF12787 EcsC protein family GNE05_05500 PF07687 Peptidase dimerisation domain GNE05_05500 PF01546 Peptidase family M20/M25/M40 GNE05_05510 PF03992 Antibiotic biosynthesis monooxygenase GNE05_05515 PF00905 Penicillin binding protein transpeptidase domain GNE05_05515 PF00912 Transglycosylase GNE05_05520 PF01208 Uroporphyrinogen decarboxylase (URO-D) GNE05_05535 PF00440 Bacterial regulatory proteins, tetR family GNE05_05535 PF17932 Tetracyclin repressor-like, C-terminal domain GNE05_05545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GNE05_05545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GNE05_05555 PF05343 M42 glutamyl aminopeptidase GNE05_05560 PF00375 Sodium:dicarboxylate symporter family GNE05_05565 PF14149 YhfH-like protein GNE05_05570 PF12706 Beta-lactamase superfamily domain GNE05_05575 PF10437 Bacterial lipoate protein ligase C-terminus GNE05_05575 PF03099 Biotin/lipoate A/B protein ligase family GNE05_05580 PF13460 NAD(P)H-binding GNE05_05585 PF13193 AMP-binding enzyme C-terminal domain GNE05_05585 PF00501 AMP-binding enzyme GNE05_05595 PF16491 CAAX prenyl protease N-terminal, five membrane helices GNE05_05595 PF01435 Peptidase family M48 GNE05_05600 PF00082 Subtilase family GNE05_05600 PF05922 Peptidase inhibitor I9 GNE05_05610 PF01497 Periplasmic binding protein GNE05_05615 PF00300 Histidine phosphatase superfamily (branch 1) GNE05_05620 PF00108 Thiolase, N-terminal domain GNE05_05620 PF02803 Thiolase, C-terminal domain GNE05_05625 PF13193 AMP-binding enzyme C-terminal domain GNE05_05625 PF00501 AMP-binding enzyme GNE05_05630 PF02632 BioY family GNE05_05635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_05640 PF00355 Rieske [2Fe-2S] domain GNE05_05640 PF01266 FAD dependent oxidoreductase GNE05_05650 PF08858 IDEAL domain GNE05_05655 PF06338 ComK protein GNE05_05665 PF08818 Domain of unknown function (DU1801) GNE05_05675 PF15493 Domain of unknown function, YrpD GNE05_05680 PF05901 Excalibur calcium-binding domain GNE05_05685 PF01906 Putative heavy-metal-binding GNE05_05690 PF00474 Sodium:solute symporter family GNE05_05695 PF11755 Protein of unknown function (DUF3311) GNE05_05705 PF09335 SNARE associated Golgi protein GNE05_05710 PF10502 Signal peptidase, peptidase S26 GNE05_05715 PF01494 FAD binding domain GNE05_05720 PF01047 MarR family GNE05_05725 PF05145 Transition state regulatory protein AbrB GNE05_05730 PF07690 Major Facilitator Superfamily GNE05_05735 PF08361 MAATS-type transcriptional repressor, C-terminal region GNE05_05735 PF00440 Bacterial regulatory proteins, tetR family GNE05_05740 PF02915 Rubrerythrin GNE05_05745 PF04239 Protein of unknown function (DUF421) GNE05_05750 PF13361 UvrD-like helicase C-terminal domain GNE05_05750 PF12705 PD-(D/E)XK nuclease superfamily GNE05_05755 PF12705 PD-(D/E)XK nuclease superfamily GNE05_05755 PF13361 UvrD-like helicase C-terminal domain GNE05_05755 PF00580 UvrD/REP helicase N-terminal domain GNE05_05760 PF00149 Calcineurin-like phosphoesterase GNE05_05760 PF12320 Type 5 capsule protein repressor C-terminal domain GNE05_05765 PF13476 AAA domain GNE05_05775 PF10676 Spore germination protein gerPA/gerPF GNE05_05780 PF10970 Spore germination protein GerPE GNE05_05790 PF10737 Spore germination protein GerPC GNE05_05795 PF10803 Spore germination GerPB GNE05_05800 PF10676 Spore germination protein gerPA/gerPF GNE05_05805 PF09388 Spo0E like sporulation regulatory protein GNE05_05810 PF01557 Fumarylacetoacetate (FAA) hydrolase family GNE05_05815 PF07457 Protein of unknown function (DUF1516) GNE05_05820 PF10949 Protein of unknown function (DUF2777) GNE05_05825 PF13537 Glutamine amidotransferase domain GNE05_05825 PF00733 Asparagine synthase GNE05_05835 PF01554 MatE GNE05_05840 PF12833 Helix-turn-helix domain GNE05_05840 PF02311 AraC-like ligand binding domain GNE05_05845 PF05163 DinB family GNE05_05850 PF01810 LysE type translocator GNE05_05855 PF00392 Bacterial regulatory proteins, gntR family GNE05_05855 PF00155 Aminotransferase class I and II GNE05_05860 PF13599 Pentapeptide repeats (9 copies) GNE05_05865 PF13673 Acetyltransferase (GNAT) domain GNE05_05870 PF02219 Methylenetetrahydrofolate reductase GNE05_05870 PF02574 Homocysteine S-methyltransferase GNE05_05875 PF04461 Protein of unknown function (DUF520) GNE05_05880 PF13509 S1 domain GNE05_05880 PF17783 CvfB-like winged helix domain GNE05_05890 PF12729 Four helix bundle sensory module for signal transduction GNE05_05890 PF00672 HAMP domain GNE05_05890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_05895 PF00067 Cytochrome P450 GNE05_05905 PF02645 Uncharacterised protein, DegV family COG1307 GNE05_05910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE05_05910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_05915 PF12690 Intracellular proteinase inhibitor GNE05_05920 PF12758 Protein of unknown function (DUF3813) GNE05_05930 PF00326 Prolyl oligopeptidase family GNE05_05935 PF01883 Iron-sulfur cluster assembly protein GNE05_05940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_05945 PF01565 FAD binding domain GNE05_05950 PF07690 Major Facilitator Superfamily GNE05_05955 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNE05_05955 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNE05_05960 PF01960 ArgJ family GNE05_05965 PF00696 Amino acid kinase family GNE05_05970 PF00202 Aminotransferase class-III GNE05_05975 PF00117 Glutamine amidotransferase class-I GNE05_05975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GNE05_05980 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GNE05_05980 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE05_05985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNE05_05985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNE05_05990 PF14168 YjzC-like protein GNE05_05995 PF11151 Protein of unknown function (DUF2929) GNE05_06010 PF02608 ABC transporter substrate-binding protein PnrA-like GNE05_06015 PF10815 ComZ GNE05_06025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GNE05_06025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GNE05_06030 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_06030 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_06035 PF10026 Predicted Zn-dependent protease (DUF2268) GNE05_06040 PF00005 ABC transporter GNE05_06040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_06045 PF00005 ABC transporter GNE05_06045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_06050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE05_06055 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_06060 PF12911 N-terminal TM domain of oligopeptide transport permease C GNE05_06060 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_06070 PF07690 Major Facilitator Superfamily GNE05_06075 PF12227 Protein of unknown function (DUF3603) GNE05_06080 PF00579 tRNA synthetases class I (W and Y) GNE05_06085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE05_06090 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_06095 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_06095 PF12911 N-terminal TM domain of oligopeptide transport permease C GNE05_06100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_06100 PF00005 ABC transporter GNE05_06105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_06105 PF00005 ABC transporter GNE05_06115 PF13508 Acetyltransferase (GNAT) domain GNE05_06120 PF03960 ArsC family GNE05_06125 PF03741 Integral membrane protein TerC family GNE05_06130 PF05389 Negative regulator of genetic competence (MecA) GNE05_06135 PF06054 Competence protein CoiA-like family GNE05_06140 PF08439 Oligopeptidase F GNE05_06140 PF01432 Peptidase family M3 GNE05_06150 PF01152 Bacterial-like globin GNE05_06155 PF01464 Transglycosylase SLT domain GNE05_06160 PF01928 CYTH domain GNE05_06170 PF04607 Region found in RelA / SpoT proteins GNE05_06175 PF01513 ATP-NAD kinase GNE05_06180 PF00849 RNA pseudouridylate synthase GNE05_06185 PF00149 Calcineurin-like phosphoesterase GNE05_06190 PF02254 TrkA-N domain GNE05_06190 PF00999 Sodium/hydrogen exchanger family GNE05_06190 PF02080 TrkA-C domain GNE05_06195 PF03070 TENA/THI-4/PQQC family GNE05_06200 PF02581 Thiamine monophosphate synthase GNE05_06205 PF01266 FAD dependent oxidoreductase GNE05_06210 PF02597 ThiS family GNE05_06215 PF05690 Thiazole biosynthesis protein ThiG GNE05_06220 PF00899 ThiF family GNE05_06225 PF08543 Phosphomethylpyrimidine kinase GNE05_06235 PF14153 Spore coat protein CotO GNE05_06240 PF10612 Spore coat protein Z GNE05_06245 PF10612 Spore coat protein Z GNE05_06250 PF07552 Spore Coat Protein X and V domain GNE05_06260 PF07552 Spore Coat Protein X and V domain GNE05_06265 PF07098 Protein of unknown function (DUF1360) GNE05_06280 PF14069 Stage VI sporulation protein F GNE05_06285 PF00580 UvrD/REP helicase N-terminal domain GNE05_06285 PF13361 UvrD-like helicase C-terminal domain GNE05_06295 PF00753 Metallo-beta-lactamase superfamily GNE05_06305 PF00005 ABC transporter GNE05_06315 PF13673 Acetyltransferase (GNAT) domain GNE05_06325 PF00756 Putative esterase GNE05_06330 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE05_06335 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE05_06400 PF13443 Cro/C1-type HTH DNA-binding domain GNE05_06465 PF03992 Antibiotic biosynthesis monooxygenase GNE05_06470 PF07690 Major Facilitator Superfamily GNE05_06475 PF01047 MarR family GNE05_06480 PF07745 Glycosyl hydrolase family 53 GNE05_06485 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GNE05_06485 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GNE05_06490 PF16363 GDP-mannose 4,6 dehydratase GNE05_06495 PF00288 GHMP kinases N terminal domain GNE05_06495 PF08544 GHMP kinases C terminal GNE05_06495 PF10509 Galactokinase galactose-binding signature GNE05_06500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE05_06500 PF02378 Phosphotransferase system, EIIC GNE05_06505 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GNE05_06510 PF00232 Glycosyl hydrolase family 1 GNE05_06515 PF00455 DeoR C terminal sensor domain GNE05_06515 PF08220 DeoR-like helix-turn-helix domain GNE05_06530 PF02308 MgtC family GNE05_06540 PF14070 Putative motility protein GNE05_06545 PF10990 Protein of unknown function (DUF2809) GNE05_06550 PF14172 Domain of unknown function (DUF4309) GNE05_06555 PF12838 4Fe-4S dicluster domain GNE05_06555 PF01568 Molydopterin dinucleotide binding domain GNE05_06555 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNE05_06555 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GNE05_06555 PF00384 Molybdopterin oxidoreductase GNE05_06560 PF07849 Protein of unknown function (DUF1641) GNE05_06565 PF00067 Cytochrome P450 GNE05_06570 PF04101 Glycosyltransferase family 28 C-terminal domain GNE05_06580 PF02602 Uroporphyrinogen-III synthase HemD GNE05_06585 PF03649 Uncharacterised protein family (UPF0014) GNE05_06590 PF00005 ABC transporter GNE05_06595 PF13536 Putative multidrug resistance efflux transporter GNE05_06605 PF07849 Protein of unknown function (DUF1641) GNE05_06610 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_06615 PF02614 Glucuronate isomerase GNE05_06625 PF00356 Bacterial regulatory proteins, lacI family GNE05_06630 PF08125 Mannitol dehydrogenase C-terminal domain GNE05_06630 PF01232 Mannitol dehydrogenase Rossmann domain GNE05_06635 PF08666 SAF domain GNE05_06635 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus GNE05_06640 PF01925 Sulfite exporter TauE/SafE GNE05_06645 PF05163 DinB family GNE05_06650 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_06660 PF01476 LysM domain GNE05_06660 PF01471 Putative peptidoglycan binding domain GNE05_06660 PF01510 N-acetylmuramoyl-L-alanine amidase GNE05_06665 PF08000 Bacterial PH domain GNE05_06670 PF05908 Poly-gamma-glutamate hydrolase GNE05_06675 PF05067 Manganese containing catalase GNE05_06680 PF06114 IrrE N-terminal-like domain GNE05_06685 PF01381 Helix-turn-helix GNE05_06700 PF01695 IstB-like ATP binding protein GNE05_06710 PF17356 Phage-like element PBSX protein XtrA GNE05_06715 PF08281 Sigma-70, region 4 GNE05_06720 PF10668 Phage terminase small subunit GNE05_06720 PF03592 Terminase small subunit GNE05_06725 PF04466 Phage terminase large subunit GNE05_06725 PF17288 Terminase RNAseH like domain GNE05_06730 PF04860 Phage portal protein GNE05_06735 PF14550 Putative phage serine protease XkdF GNE05_06740 PF05065 Phage capsid family GNE05_06745 PF11436 Protein of unknown function (DUF3199) GNE05_06750 PF12206 Domain of unknown function (DUF3599) GNE05_06755 PF04883 Bacteriophage HK97-gp10, putative tail-component GNE05_06770 PF17482 Phage tail sheath C-terminal domain GNE05_06770 PF04984 Phage tail sheath protein subtilisin-like domain GNE05_06770 PF17481 Phage tail sheath protein beta-sandwich domain GNE05_06775 PF09393 Phage tail tube protein GNE05_06780 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GNE05_06790 PF01464 Transglycosylase SLT domain GNE05_06790 PF01464 Transglycosylase SLT domain GNE05_06790 PF01464 Transglycosylase SLT domain GNE05_06795 PF01476 LysM domain GNE05_06805 PF10844 Protein of unknown function (DUF2577) GNE05_06810 PF10934 Protein of unknown function (DUF2634) GNE05_06815 PF04865 Baseplate J-like protein GNE05_06820 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) GNE05_06840 PF09693 Phage uncharacterised protein (Phage_XkdX) GNE05_06850 PF10779 Haemolysin XhlA GNE05_06855 PF04688 SPP1 phage holin GNE05_06860 PF01510 N-acetylmuramoyl-L-alanine amidase GNE05_06860 PF01471 Putative peptidoglycan binding domain GNE05_06860 PF01476 LysM domain GNE05_06865 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system GNE05_06870 PF14171 Toxin SpoIISA, type II toxin-antitoxin system GNE05_06875 PF01384 Phosphate transporter family GNE05_06880 PF01865 Protein of unknown function DUF47 GNE05_06885 PF13520 Amino acid permease GNE05_06890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_06895 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GNE05_06900 PF00535 Glycosyl transferase family 2 GNE05_06905 PF13180 PDZ domain GNE05_06910 PF07690 Major Facilitator Superfamily GNE05_06915 PF04951 D-aminopeptidase GNE05_06920 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_06925 PF12911 N-terminal TM domain of oligopeptide transport permease C GNE05_06925 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_06930 PF00005 ABC transporter GNE05_06930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_06935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GNE05_06940 PF17676 LD-carboxypeptidase C-terminal domain GNE05_06940 PF02016 LD-carboxypeptidase N-terminal domain GNE05_06945 PF13378 Enolase C-terminal domain-like GNE05_06945 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNE05_06950 PF00877 NlpC/P60 family GNE05_06955 PF00005 ABC transporter GNE05_06955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GNE05_06960 PF10282 Lactonase, 7-bladed beta-propeller GNE05_06970 PF03061 Thioesterase superfamily GNE05_06975 PF13302 Acetyltransferase (GNAT) domain GNE05_06980 PF00893 Small Multidrug Resistance protein GNE05_06985 PF00893 Small Multidrug Resistance protein GNE05_06990 PF01842 ACT domain GNE05_06990 PF00551 Formyl transferase GNE05_06995 PF00696 Amino acid kinase family GNE05_06995 PF01472 PUA domain GNE05_07000 PF00171 Aldehyde dehydrogenase family GNE05_07005 PF02566 OsmC-like protein GNE05_07010 PF01047 MarR family GNE05_07015 PF02566 OsmC-like protein GNE05_07030 PF00535 Glycosyl transferase family 2 GNE05_07030 PF13181 Tetratricopeptide repeat GNE05_07040 PF12832 MFS_1 like family GNE05_07045 PF00027 Cyclic nucleotide-binding domain GNE05_07050 PF08267 Cobalamin-independent synthase, N-terminal domain GNE05_07050 PF01717 Cobalamin-independent synthase, Catalytic domain GNE05_07055 PF00082 Subtilase family GNE05_07060 PF01740 STAS domain GNE05_07065 PF02361 Cobalt transport protein GNE05_07070 PF00005 ABC transporter GNE05_07075 PF09819 ABC-type cobalt transport system, permease component GNE05_07080 PF00704 Glycosyl hydrolases family 18 GNE05_07080 PF01476 LysM domain GNE05_07085 PF11132 Transcriptional regulator protein (SplA) GNE05_07095 PF00571 CBS domain GNE05_07095 PF01769 Divalent cation transporter GNE05_07095 PF03448 MgtE intracellular N domain GNE05_07100 PF13411 MerR HTH family regulatory protein GNE05_07115 PF01047 MarR family GNE05_07125 PF01068 ATP dependent DNA ligase domain GNE05_07130 PF02735 Ku70/Ku80 beta-barrel domain GNE05_07135 PF09335 SNARE associated Golgi protein GNE05_07140 PF03741 Integral membrane protein TerC family GNE05_07145 PF04542 Sigma-70 region 2 GNE05_07150 PF12791 Anti-sigma factor N-terminus GNE05_07155 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE05_07170 PF02386 Cation transport protein GNE05_07175 PF04239 Protein of unknown function (DUF421) GNE05_07185 PF01757 Acyltransferase family GNE05_07190 PF00512 His Kinase A (phospho-acceptor) domain GNE05_07190 PF00989 PAS fold GNE05_07190 PF13188 PAS domain GNE05_07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_07190 PF13426 PAS domain GNE05_07195 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GNE05_07195 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GNE05_07200 PF01008 Initiation factor 2 subunit family GNE05_07205 PF01636 Phosphotransferase enzyme family GNE05_07210 PF00795 Carbon-nitrogen hydrolase GNE05_07215 PF00155 Aminotransferase class I and II GNE05_07220 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GNE05_07220 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GNE05_07230 PF00596 Class II Aldolase and Adducin N-terminal domain GNE05_07235 PF03079 ARD/ARD' family GNE05_07240 PF09388 Spo0E like sporulation regulatory protein GNE05_07245 PF00512 His Kinase A (phospho-acceptor) domain GNE05_07245 PF02743 Cache domain GNE05_07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_07250 PF01047 MarR family GNE05_07255 PF13677 Membrane MotB of proton-channel complex MotA/MotB GNE05_07255 PF00691 OmpA family GNE05_07260 PF01618 MotA/TolQ/ExbB proton channel family GNE05_07265 PF10431 C-terminal, D2-small domain, of ClpB protein GNE05_07265 PF17871 AAA lid domain GNE05_07265 PF07724 AAA domain (Cdc48 subfamily) GNE05_07265 PF00004 ATPase family associated with various cellular activities (AAA) GNE05_07280 PF06508 Queuosine biosynthesis protein QueC GNE05_07285 PF01242 6-pyruvoyl tetrahydropterin synthase GNE05_07290 PF04055 Radical SAM superfamily GNE05_07295 PF14489 QueF-like protein GNE05_07305 PF01638 HxlR-like helix-turn-helix GNE05_07320 PF01476 LysM domain GNE05_07325 PF01476 LysM domain GNE05_07330 PF00704 Glycosyl hydrolases family 18 GNE05_07335 PF11514 Protein of unknown function (DUF3219) GNE05_07340 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GNE05_07350 PF07486 Cell Wall Hydrolase GNE05_07355 PF01943 Polysaccharide biosynthesis protein GNE05_07360 PF00578 AhpC/TSA family GNE05_07370 PF00557 Metallopeptidase family M24 GNE05_07370 PF01321 Creatinase/Prolidase N-terminal domain GNE05_07375 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNE05_07375 PF00356 Bacterial regulatory proteins, lacI family GNE05_07380 PF03123 CAT RNA binding domain GNE05_07380 PF00874 PRD domain GNE05_07385 PF02378 Phosphotransferase system, EIIC GNE05_07385 PF00367 phosphotransferase system, EIIB GNE05_07385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNE05_07390 PF00381 PTS HPr component phosphorylation site GNE05_07395 PF05524 PEP-utilising enzyme, N-terminal GNE05_07395 PF00391 PEP-utilising enzyme, mobile domain GNE05_07395 PF02896 PEP-utilising enzyme, TIM barrel domain GNE05_07400 PF11132 Transcriptional regulator protein (SplA) GNE05_07410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_07410 PF00672 HAMP domain GNE05_07410 PF02743 Cache domain GNE05_07415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNE05_07415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GNE05_07420 PF00188 Cysteine-rich secretory protein family GNE05_07425 PF03717 Penicillin-binding Protein dimerisation domain GNE05_07425 PF00905 Penicillin binding protein transpeptidase domain GNE05_07430 PF08447 PAS fold GNE05_07430 PF00512 His Kinase A (phospho-acceptor) domain GNE05_07430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_07430 PF00989 PAS fold GNE05_07435 PF00155 Aminotransferase class I and II GNE05_07440 PF01584 CheW-like domain GNE05_07440 PF00072 Response regulator receiver domain GNE05_07445 PF14177 YkyB-like protein GNE05_07450 PF07690 Major Facilitator Superfamily GNE05_07455 PF03734 L,D-transpeptidase catalytic domain GNE05_07455 PF01476 LysM domain GNE05_07460 PF10518 TAT (twin-arginine translocation) pathway signal sequence GNE05_07460 PF00149 Calcineurin-like phosphoesterase GNE05_07475 PF00563 EAL domain GNE05_07475 PF10388 EAL-domain associated signalling protein domain GNE05_07480 PF08796 Protein of unknown function (DUF1797) GNE05_07485 PF04308 Ribonuclease H-like GNE05_07490 PF14156 Antirepressor AbbA GNE05_07500 PF03466 LysR substrate binding domain GNE05_07500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_07505 PF00258 Flavodoxin GNE05_07515 PF00258 Flavodoxin GNE05_07520 PF00132 Bacterial transferase hexapeptide (six repeats) GNE05_07520 PF14602 Hexapeptide repeat of succinyl-transferase GNE05_07520 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GNE05_07525 PF01546 Peptidase family M20/M25/M40 GNE05_07525 PF07687 Peptidase dimerisation domain GNE05_07530 PF03698 Uncharacterised protein family (UPF0180) GNE05_07535 PF00924 Mechanosensitive ion channel GNE05_07540 PF00578 AhpC/TSA family GNE05_07555 PF12804 MobA-like NTP transferase domain GNE05_07560 PF00899 ThiF family GNE05_07565 PF00994 Probable molybdopterin binding domain GNE05_07565 PF03454 MoeA C-terminal region (domain IV) GNE05_07565 PF03453 MoeA N-terminal region (domain I and II) GNE05_07570 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GNE05_07575 PF02391 MoaE protein GNE05_07580 PF02597 ThiS family GNE05_07585 PF04893 Yip1 domain GNE05_07590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GNE05_07595 PF00005 ABC transporter GNE05_07600 PF12704 MacB-like periplasmic core domain GNE05_07600 PF02687 FtsX-like permease family GNE05_07605 PF00455 DeoR C terminal sensor domain GNE05_07605 PF08220 DeoR-like helix-turn-helix domain GNE05_07610 PF00294 pfkB family carbohydrate kinase GNE05_07615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE05_07615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE05_07620 PF10502 Signal peptidase, peptidase S26 GNE05_07630 PF00005 ABC transporter GNE05_07630 PF12848 ABC transporter GNE05_07635 PF02558 Ketopantoate reductase PanE/ApbA GNE05_07635 PF08546 Ketopantoate reductase PanE/ApbA C terminal GNE05_07640 PF02073 Thermophilic metalloprotease (M29) GNE05_07645 PF17447 Uncharacterized YkpC-like GNE05_07655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GNE05_07655 PF18277 AbrB C-terminal domain GNE05_07660 PF00512 His Kinase A (phospho-acceptor) domain GNE05_07660 PF00989 PAS fold GNE05_07660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_07665 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GNE05_07670 PF02254 TrkA-N domain GNE05_07670 PF02080 TrkA-C domain GNE05_07675 PF01979 Amidohydrolase family GNE05_07675 PF13382 Adenine deaminase C-terminal domain GNE05_07680 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GNE05_07680 PF00753 Metallo-beta-lactamase superfamily GNE05_07680 PF17770 Ribonuclease J C-terminal domain GNE05_07695 PF01327 Polypeptide deformylase GNE05_07705 PF10368 Putative cell-wall binding lipoprotein GNE05_07710 PF00698 Acyl transferase domain GNE05_07715 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_07715 PF14765 Polyketide synthase dehydratase GNE05_07715 PF00550 Phosphopantetheine attachment site GNE05_07715 PF08659 KR domain GNE05_07715 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_07715 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_07715 PF00668 Condensation domain GNE05_07715 PF13193 AMP-binding enzyme C-terminal domain GNE05_07715 PF00501 AMP-binding enzyme GNE05_07720 PF14765 Polyketide synthase dehydratase GNE05_07720 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_07720 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_07720 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_07720 PF08659 KR domain GNE05_07720 PF00550 Phosphopantetheine attachment site GNE05_07725 PF14765 Polyketide synthase dehydratase GNE05_07725 PF00550 Phosphopantetheine attachment site GNE05_07725 PF08659 KR domain GNE05_07725 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_07725 PF00501 AMP-binding enzyme GNE05_07725 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_07725 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_07725 PF13193 AMP-binding enzyme C-terminal domain GNE05_07725 PF00668 Condensation domain GNE05_07730 PF00550 Phosphopantetheine attachment site GNE05_07730 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_07730 PF14765 Polyketide synthase dehydratase GNE05_07730 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_07730 PF08659 KR domain GNE05_07730 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_07735 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_07735 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_07735 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_07735 PF08659 KR domain GNE05_07735 PF00550 Phosphopantetheine attachment site GNE05_07735 PF14765 Polyketide synthase dehydratase GNE05_07740 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_07740 PF00550 Phosphopantetheine attachment site GNE05_07740 PF14765 Polyketide synthase dehydratase GNE05_07740 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_07740 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_07740 PF08659 KR domain GNE05_07745 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_07745 PF00550 Phosphopantetheine attachment site GNE05_07745 PF14765 Polyketide synthase dehydratase GNE05_07745 PF00501 AMP-binding enzyme GNE05_07745 PF00668 Condensation domain GNE05_07745 PF13193 AMP-binding enzyme C-terminal domain GNE05_07745 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_07745 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_07745 PF08659 KR domain GNE05_07750 PF11954 Domain of unknown function (DUF3471) GNE05_07750 PF00144 Beta-lactamase GNE05_07755 PF00676 Dehydrogenase E1 component GNE05_07760 PF02779 Transketolase, pyrimidine binding domain GNE05_07760 PF02780 Transketolase, C-terminal domain GNE05_07765 PF02817 e3 binding domain GNE05_07765 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE05_07765 PF00364 Biotin-requiring enzyme GNE05_07770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE05_07770 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_07785 PF13790 SR1 protein GNE05_07790 PF01276 Orn/Lys/Arg decarboxylase, major domain GNE05_07790 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GNE05_07795 PF05256 Uncharacterised protein family (UPF0223) GNE05_07800 PF06335 Protein of unknown function (DUF1054) GNE05_07810 PF00459 Inositol monophosphatase family GNE05_07815 PF00583 Acetyltransferase (GNAT) family GNE05_07820 PF01447 Thermolysin metallopeptidase, catalytic domain GNE05_07820 PF02868 Thermolysin metallopeptidase, alpha-helical domain GNE05_07820 PF07504 Fungalysin/Thermolysin Propeptide Motif GNE05_07820 PF03413 Peptidase propeptide and YPEB domain GNE05_07830 PF13490 Putative zinc-finger GNE05_07840 PF17259 Family of unknown function (DUF5325) GNE05_07850 PF14036 YlaH-like protein GNE05_07855 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GNE05_07860 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNE05_07865 PF02562 PhoH-like protein GNE05_07865 PF13638 PIN domain GNE05_07875 PF04960 Glutaminase GNE05_07880 PF07408 Protein of unknown function (DUF1507) GNE05_07885 PF01098 Cell cycle protein GNE05_07890 PF02436 Conserved carboxylase domain GNE05_07890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE05_07890 PF00364 Biotin-requiring enzyme GNE05_07890 PF00289 Biotin carboxylase, N-terminal domain GNE05_07890 PF02785 Biotin carboxylase C-terminal domain GNE05_07890 PF00682 HMGL-like GNE05_07895 PF02628 Cytochrome oxidase assembly protein GNE05_07900 PF01040 UbiA prenyltransferase family GNE05_07905 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GNE05_07905 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GNE05_07905 PF00034 Cytochrome c GNE05_07910 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNE05_07915 PF00510 Cytochrome c oxidase subunit III GNE05_07920 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GNE05_07925 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GNE05_07935 PF08868 YugN-like family GNE05_07940 PF00571 CBS domain GNE05_07945 PF00188 Cysteine-rich secretory protein family GNE05_07945 PF14504 CAP-associated N-terminal GNE05_07950 PF14071 Putative coat protein GNE05_07955 PF14003 YlbE-like protein GNE05_07960 PF06133 Control of competence regulator ComK, YlbF/YmcA GNE05_07965 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GNE05_07975 PF01467 Cytidylyltransferase-like GNE05_07980 PF07670 Nucleoside recognition GNE05_07985 PF01734 Patatin-like phospholipase GNE05_07990 PF13180 PDZ domain GNE05_07990 PF05362 Lon protease (S16) C-terminal proteolytic domain GNE05_08000 PF05636 HIGH Nucleotidyl Transferase GNE05_08005 PF02620 Large ribosomal RNA subunit accumulation protein YceD GNE05_08010 PF01783 Ribosomal L32p protein family GNE05_08020 PF00583 Acetyltransferase (GNAT) family GNE05_08025 PF08546 Ketopantoate reductase PanE/ApbA C terminal GNE05_08025 PF02558 Ketopantoate reductase PanE/ApbA GNE05_08030 PF10079 Bacillithiol biosynthesis BshC GNE05_08035 PF02381 MraZ protein, putative antitoxin-like GNE05_08040 PF01795 MraW methylase family GNE05_08055 PF00905 Penicillin binding protein transpeptidase domain GNE05_08055 PF03793 PASTA domain GNE05_08055 PF03717 Penicillin-binding Protein dimerisation domain GNE05_08060 PF02875 Mur ligase family, glutamate ligase domain GNE05_08060 PF01225 Mur ligase family, catalytic domain GNE05_08060 PF08245 Mur ligase middle domain GNE05_08065 PF00953 Glycosyl transferase family 4 GNE05_08065 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GNE05_08070 PF08245 Mur ligase middle domain GNE05_08070 PF02875 Mur ligase family, glutamate ligase domain GNE05_08075 PF01098 Cell cycle protein GNE05_08080 PF04101 Glycosyltransferase family 28 C-terminal domain GNE05_08080 PF03033 Glycosyltransferase family 28 N-terminal domain GNE05_08085 PF01565 FAD binding domain GNE05_08085 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GNE05_08090 PF08478 POTRA domain, FtsQ-type GNE05_08095 PF02491 SHS2 domain inserted in FTSA GNE05_08100 PF12327 FtsZ family, C-terminal domain GNE05_08100 PF00091 Tubulin/FtsZ family, GTPase domain GNE05_08105 PF05922 Peptidase inhibitor I9 GNE05_08105 PF00082 Subtilase family GNE05_08110 PF03419 Sporulation factor SpoIIGA GNE05_08115 PF04542 Sigma-70 region 2 GNE05_08115 PF04545 Sigma-70, region 4 GNE05_08120 PF04539 Sigma-70 region 3 GNE05_08120 PF04545 Sigma-70, region 4 GNE05_08120 PF04542 Sigma-70 region 2 GNE05_08125 PF00005 ABC transporter GNE05_08130 PF01546 Peptidase family M20/M25/M40 GNE05_08130 PF07687 Peptidase dimerisation domain GNE05_08135 PF05239 PRC-barrel domain GNE05_08145 PF01168 Alanine racemase, N-terminal domain GNE05_08150 PF04472 Cell division protein SepF GNE05_08155 PF02325 YGGT family GNE05_08160 PF01479 S4 domain GNE05_08160 PF17774 Putative RNA-binding domain in YlmH GNE05_08165 PF05103 DivIVA protein GNE05_08170 PF00133 tRNA synthetases class I (I, L, M and V) GNE05_08170 PF08264 Anticodon-binding domain of tRNA GNE05_08175 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNE05_08180 PF01252 Signal peptidase (SPase) II GNE05_08185 PF00849 RNA pseudouridylate synthase GNE05_08185 PF01479 S4 domain GNE05_08190 PF00156 Phosphoribosyl transferase domain GNE05_08195 PF00860 Permease family GNE05_08200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GNE05_08200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GNE05_08205 PF01979 Amidohydrolase family GNE05_08210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GNE05_08210 PF00117 Glutamine amidotransferase class-I GNE05_08215 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GNE05_08215 PF02142 MGS-like domain GNE05_08215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE05_08220 PF00175 Oxidoreductase NAD-binding domain GNE05_08220 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GNE05_08225 PF01180 Dihydroorotate dehydrogenase GNE05_08230 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GNE05_08235 PF00156 Phosphoribosyl transferase domain GNE05_08240 PF01507 Phosphoadenosine phosphosulfate reductase family GNE05_08245 PF01384 Phosphate transporter family GNE05_08250 PF14306 PUA-like domain GNE05_08250 PF01747 ATP-sulfurylase GNE05_08260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GNE05_08265 PF01903 CbiX GNE05_08275 PF05670 NFACT protein RNA binding domain GNE05_08280 PF00690 Cation transporter/ATPase, N-terminus GNE05_08280 PF00689 Cation transporting ATPase, C-terminus GNE05_08285 PF03755 YicC-like family, N-terminal region GNE05_08285 PF08340 Domain of unknown function (DUF1732) GNE05_08290 PF04025 Domain of unknown function (DUF370) GNE05_08295 PF00625 Guanylate kinase GNE05_08300 PF01192 RNA polymerase Rpb6 GNE05_08305 PF04127 DNA / pantothenate metabolism flavoprotein GNE05_08305 PF02441 Flavoprotein GNE05_08310 PF18074 Primosomal protein N C-terminal domain GNE05_08310 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GNE05_08310 PF00271 Helicase conserved C-terminal domain GNE05_08310 PF04851 Type III restriction enzyme, res subunit GNE05_08310 PF17764 3′ DNA-binding domain (3′BD) GNE05_08315 PF01327 Polypeptide deformylase GNE05_08320 PF02911 Formyl transferase, C-terminal domain GNE05_08320 PF00551 Formyl transferase GNE05_08325 PF01029 NusB family GNE05_08325 PF01189 16S rRNA methyltransferase RsmB/F GNE05_08330 PF04055 Radical SAM superfamily GNE05_08340 PF03793 PASTA domain GNE05_08340 PF00069 Protein kinase domain GNE05_08345 PF03193 RsgA GTPase GNE05_08345 PF16745 RsgA N-terminal domain GNE05_08350 PF00834 Ribulose-phosphate 3 epimerase family GNE05_08355 PF04263 Thiamin pyrophosphokinase, catalytic domain GNE05_08355 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GNE05_08360 PF08183 Stage V sporulation protein family GNE05_08365 PF00830 Ribosomal L28 family GNE05_08370 PF03780 Asp23 family, cell envelope-related function GNE05_08375 PF02734 DAK2 domain GNE05_08375 PF13684 Dihydroxyacetone kinase family GNE05_08380 PF01842 ACT domain GNE05_08380 PF03315 Serine dehydratase beta chain GNE05_08385 PF03313 Serine dehydratase alpha chain GNE05_08390 PF00270 DEAD/DEAH box helicase GNE05_08390 PF00271 Helicase conserved C-terminal domain GNE05_08390 PF17191 RecG wedge domain GNE05_08395 PF03061 Thioesterase superfamily GNE05_08400 PF02504 Fatty acid synthesis protein GNE05_08405 PF00698 Acyl transferase domain GNE05_08415 PF00550 Phosphopantetheine attachment site GNE05_08420 PF14622 Ribonuclease-III-like GNE05_08420 PF00035 Double-stranded RNA binding motif GNE05_08425 PF06470 SMC proteins Flexible Hinge Domain GNE05_08425 PF02463 RecF/RecN/SMC N terminal domain GNE05_08430 PF00448 SRP54-type protein, GTPase domain GNE05_08430 PF02881 SRP54-type protein, helical bundle domain GNE05_08440 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GNE05_08445 PF02881 SRP54-type protein, helical bundle domain GNE05_08445 PF00448 SRP54-type protein, GTPase domain GNE05_08445 PF02978 Signal peptide binding domain GNE05_08450 PF00886 Ribosomal protein S16 GNE05_08460 PF11068 YlqD protein GNE05_08465 PF01782 RimM N-terminal domain GNE05_08465 PF05239 PRC-barrel domain GNE05_08470 PF01746 tRNA (Guanine-1)-methyltransferase GNE05_08475 PF01245 Ribosomal protein L19 GNE05_08480 PF01926 50S ribosome-binding GTPase GNE05_08485 PF01351 Ribonuclease HII GNE05_08495 PF01312 FlhB HrpN YscU SpaS Family GNE05_08500 PF08442 ATP-grasp domain GNE05_08500 PF00549 CoA-ligase GNE05_08505 PF02629 CoA binding domain GNE05_08505 PF00549 CoA-ligase GNE05_08510 PF02481 DNA recombination-mediator protein A GNE05_08515 PF01396 Topoisomerase DNA binding C4 zinc finger GNE05_08515 PF01751 Toprim domain GNE05_08515 PF01131 DNA topoisomerase GNE05_08520 PF01134 Glucose inhibited division protein A GNE05_08525 PF00589 Phage integrase family GNE05_08525 PF02899 Phage integrase, N-terminal SAM-like domain GNE05_08530 PF00227 Proteasome subunit GNE05_08535 PF07724 AAA domain (Cdc48 subfamily) GNE05_08535 PF00004 ATPase family associated with various cellular activities (AAA) GNE05_08535 PF10431 C-terminal, D2-small domain, of ClpB protein GNE05_08540 PF06018 CodY GAF-like domain GNE05_08540 PF08222 CodY helix-turn-helix domain GNE05_08545 PF00460 Flagella basal body rod protein GNE05_08550 PF00460 Flagella basal body rod protein GNE05_08550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE05_08555 PF02049 Flagellar hook-basal body complex protein FliE GNE05_08560 PF01514 Secretory protein of YscJ/FliF family GNE05_08560 PF08345 Flagellar M-ring protein C-terminal GNE05_08565 PF14842 FliG N-terminal domain GNE05_08565 PF01706 FliG C-terminal domain GNE05_08565 PF14841 FliG middle domain GNE05_08570 PF02108 Flagellar assembly protein FliH GNE05_08575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE05_08575 PF18269 T3SS EscN ATPase C-terminal domain GNE05_08575 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNE05_08580 PF02050 Flagellar FliJ protein GNE05_08585 PF03448 MgtE intracellular N domain GNE05_08590 PF02120 Flagellar hook-length control protein FliK GNE05_08595 PF03963 Flagellar hook capping protein - N-terminal region GNE05_08600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE05_08600 PF00460 Flagella basal body rod protein GNE05_08605 PF06289 Flagellar and Swarming motility proteins GNE05_08610 PF03748 Flagellar basal body-associated protein FliL GNE05_08615 PF02154 Flagellar motor switch protein FliM GNE05_08615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNE05_08620 PF04509 CheC-like family GNE05_08620 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GNE05_08625 PF00072 Response regulator receiver domain GNE05_08630 PF04347 Flagellar biosynthesis protein, FliO GNE05_08635 PF00813 FliP family GNE05_08640 PF01313 Bacterial export proteins, family 3 GNE05_08645 PF01311 Bacterial export proteins, family 1 GNE05_08650 PF01312 FlhB HrpN YscU SpaS Family GNE05_08655 PF00771 FHIPEP family GNE05_08660 PF00448 SRP54-type protein, GTPase domain GNE05_08665 PF10609 NUBPL iron-transfer P-loop NTPase GNE05_08670 PF01339 CheB methylesterase GNE05_08670 PF00072 Response regulator receiver domain GNE05_08675 PF01584 CheW-like domain GNE05_08675 PF02895 Signal transducing histidine kinase, homodimeric domain GNE05_08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_08675 PF01627 Hpt domain GNE05_08675 PF07194 P2 response regulator binding domain GNE05_08680 PF01584 CheW-like domain GNE05_08685 PF04509 CheC-like family GNE05_08690 PF03975 CheD chemotactic sensory transduction GNE05_08695 PF04539 Sigma-70 region 3 GNE05_08695 PF04542 Sigma-70 region 2 GNE05_08695 PF04545 Sigma-70, region 4 GNE05_08705 PF00318 Ribosomal protein S2 GNE05_08710 PF00889 Elongation factor TS GNE05_08715 PF00696 Amino acid kinase family GNE05_08720 PF01765 Ribosome recycling factor GNE05_08725 PF01255 Putative undecaprenyl diphosphate synthase GNE05_08735 PF13288 DXP reductoisomerase C-terminal domain GNE05_08735 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GNE05_08735 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GNE05_08740 PF02163 Peptidase family M50 GNE05_08740 PF17820 PDZ domain GNE05_08745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE05_08745 PF03129 Anticodon binding domain GNE05_08745 PF04073 Aminoacyl-tRNA editing domain GNE05_08750 PF14480 DNA polymerase III polC-type N-terminus I GNE05_08750 PF02811 PHP domain GNE05_08750 PF14579 Helix-hairpin-helix motif GNE05_08750 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNE05_08750 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNE05_08750 PF11490 DNA polymerase III polC-type N-terminus II GNE05_08750 PF00929 Exonuclease GNE05_08755 PF17384 RimP C-terminal SH3 domain GNE05_08755 PF02576 RimP N-terminal domain GNE05_08760 PF08529 NusA N-terminal domain GNE05_08760 PF00575 S1 RNA binding domain GNE05_08760 PF13184 NusA-like KH domain GNE05_08765 PF04296 Protein of unknown function (DUF448) GNE05_08770 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GNE05_08775 PF04760 Translation initiation factor IF-2, N-terminal region GNE05_08775 PF11987 Translation-initiation factor 2 GNE05_08775 PF00009 Elongation factor Tu GTP binding domain GNE05_08780 PF04456 Protein of unknown function (DUF503) GNE05_08785 PF02033 Ribosome-binding factor A GNE05_08790 PF01509 TruB family pseudouridylate synthase (N terminal domain) GNE05_08790 PF16198 tRNA pseudouridylate synthase B C-terminal domain GNE05_08795 PF01687 Riboflavin kinase GNE05_08795 PF06574 FAD synthetase GNE05_08800 PF00312 Ribosomal protein S15 GNE05_08805 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GNE05_08805 PF00013 KH domain GNE05_08805 PF00575 S1 RNA binding domain GNE05_08805 PF03725 3' exoribonuclease family, domain 2 GNE05_08805 PF01138 3' exoribonuclease family, domain 1 GNE05_08810 PF01522 Polysaccharide deacetylase GNE05_08815 PF05193 Peptidase M16 inactive domain GNE05_08815 PF00675 Insulinase (Peptidase family M16) GNE05_08820 PF05239 PRC-barrel domain GNE05_08825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNE05_08825 PF16924 Dipicolinate synthase subunit A N-terminal domain GNE05_08830 PF02441 Flavoprotein GNE05_08835 PF02774 Semialdehyde dehydrogenase, dimerisation domain GNE05_08835 PF01118 Semialdehyde dehydrogenase, NAD binding domain GNE05_08840 PF13840 ACT domain GNE05_08840 PF00696 Amino acid kinase family GNE05_08845 PF00701 Dihydrodipicolinate synthetase family GNE05_08850 PF17770 Ribonuclease J C-terminal domain GNE05_08850 PF00753 Metallo-beta-lactamase superfamily GNE05_08850 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GNE05_08855 PF00574 Clp protease GNE05_08860 PF14035 YlzJ-like protein GNE05_08865 PF17854 FtsK alpha domain GNE05_08865 PF09397 Ftsk gamma domain GNE05_08865 PF01580 FtsK/SpoIIIE family GNE05_08870 PF07702 UTRA domain GNE05_08870 PF00392 Bacterial regulatory proteins, gntR family GNE05_08875 PF07690 Major Facilitator Superfamily GNE05_08880 PF01047 MarR family GNE05_08885 PF03176 MMPL family GNE05_08890 PF05193 Peptidase M16 inactive domain GNE05_08895 PF05193 Peptidase M16 inactive domain GNE05_08895 PF00675 Insulinase (Peptidase family M16) GNE05_08905 PF11588 Protein of unknown function (DUF3243) GNE05_08910 PF11868 Protein of unknown function (DUF3388) GNE05_08915 PF13464 Domain of unknown function (DUF4115) GNE05_08920 PF01066 CDP-alcohol phosphatidyltransferase GNE05_08925 PF00994 Probable molybdopterin binding domain GNE05_08925 PF18146 Damage-inducible protein CinA KH domain GNE05_08925 PF02464 Competence-damaged protein GNE05_08930 PF00154 recA bacterial DNA recombination protein GNE05_08935 PF00144 Beta-lactamase GNE05_08940 PF12072 Domain of unknown function (DUF3552) GNE05_08940 PF00013 KH domain GNE05_08940 PF01966 HD domain GNE05_08945 PF13277 YmdB-like protein GNE05_08950 PF04232 Stage V sporulation protein S (SpoVS) GNE05_08955 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_08955 PF00107 Zinc-binding dehydrogenase GNE05_08960 PF00155 Aminotransferase class I and II GNE05_08965 PF04055 Radical SAM superfamily GNE05_08965 PF01938 TRAM domain GNE05_08965 PF00919 Uncharacterized protein family UPF0004 GNE05_08970 PF06133 Control of competence regulator ComK, YlbF/YmcA GNE05_08975 PF10628 Outer spore coat protein E (CotE) GNE05_08980 PF01624 MutS domain I GNE05_08980 PF05192 MutS domain III GNE05_08980 PF00488 MutS domain V GNE05_08980 PF05190 MutS family domain IV GNE05_08980 PF05188 MutS domain II GNE05_08985 PF08676 MutL C terminal dimerisation domain GNE05_08985 PF01119 DNA mismatch repair protein, C-terminal domain GNE05_09035 PF00753 Metallo-beta-lactamase superfamily GNE05_09040 PF00698 Acyl transferase domain GNE05_09045 PF00698 Acyl transferase domain GNE05_09050 PF00698 Acyl transferase domain GNE05_09055 PF00550 Phosphopantetheine attachment site GNE05_09060 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal GNE05_09060 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal GNE05_09065 PF00378 Enoyl-CoA hydratase/isomerase GNE05_09070 PF00378 Enoyl-CoA hydratase/isomerase GNE05_09075 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_09075 PF00550 Phosphopantetheine attachment site GNE05_09075 PF00668 Condensation domain GNE05_09075 PF13193 AMP-binding enzyme C-terminal domain GNE05_09075 PF00501 AMP-binding enzyme GNE05_09075 PF08659 KR domain GNE05_09075 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_09075 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_09075 PF14765 Polyketide synthase dehydratase GNE05_09080 PF14765 Polyketide synthase dehydratase GNE05_09080 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_09080 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_09080 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_09080 PF08659 KR domain GNE05_09080 PF00550 Phosphopantetheine attachment site GNE05_09085 PF08242 Methyltransferase domain GNE05_09085 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_09085 PF14765 Polyketide synthase dehydratase GNE05_09085 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_09085 PF00550 Phosphopantetheine attachment site GNE05_09085 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_09085 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_09085 PF08242 Methyltransferase domain GNE05_09085 PF14765 Polyketide synthase dehydratase GNE05_09085 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_09085 PF08659 KR domain GNE05_09085 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_09085 PF00550 Phosphopantetheine attachment site GNE05_09085 PF08659 KR domain GNE05_09090 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_09090 PF00668 Condensation domain GNE05_09090 PF14765 Polyketide synthase dehydratase GNE05_09090 PF00501 AMP-binding enzyme GNE05_09090 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_09090 PF13193 AMP-binding enzyme C-terminal domain GNE05_09090 PF08659 KR domain GNE05_09090 PF00550 Phosphopantetheine attachment site GNE05_09090 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_09095 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_09095 PF00975 Thioesterase domain GNE05_09095 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_09095 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_09095 PF08242 Methyltransferase domain GNE05_09095 PF00550 Phosphopantetheine attachment site GNE05_09095 PF14765 Polyketide synthase dehydratase GNE05_09100 PF00067 Cytochrome P450 GNE05_09105 PF14040 Deoxyribonuclease NucA/NucB GNE05_09110 PF06912 Protein of unknown function (DUF1275) GNE05_09120 PF00082 Subtilase family GNE05_09130 PF05908 Poly-gamma-glutamate hydrolase GNE05_09135 PF02566 OsmC-like protein GNE05_09140 PF00893 Small Multidrug Resistance protein GNE05_09145 PF00893 Small Multidrug Resistance protein GNE05_09155 PF12788 YmaF family GNE05_09165 PF17209 Hfq protein GNE05_09170 PF14157 YmzC-like protein GNE05_09180 PF07972 NrdI Flavodoxin like GNE05_09185 PF00317 Ribonucleotide reductase, all-alpha domain GNE05_09185 PF08343 Ribonucleotide reductase N-terminal GNE05_09185 PF02867 Ribonucleotide reductase, barrel domain GNE05_09190 PF00268 Ribonucleotide reductase, small chain GNE05_09200 PF01520 N-acetylmuramoyl-L-alanine amidase GNE05_09200 PF05036 Sporulation related domain GNE05_09210 PF00004 ATPase family associated with various cellular activities (AAA) GNE05_09210 PF17866 AAA lid domain GNE05_09215 PF01926 50S ribosome-binding GTPase GNE05_09215 PF13167 GTP-binding GTPase N-terminal GNE05_09215 PF16360 GTP-binding GTPase Middle Region GNE05_09220 PF06838 Methionine gamma-lyase GNE05_09225 PF13411 MerR HTH family regulatory protein GNE05_09230 PF00120 Glutamine synthetase, catalytic domain GNE05_09230 PF03951 Glutamine synthetase, beta-Grasp domain GNE05_09245 PF04616 Glycosyl hydrolases family 43 GNE05_09245 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain GNE05_09250 PF00480 ROK family GNE05_09255 PF01261 Xylose isomerase-like TIM barrel GNE05_09260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE05_09260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE05_09265 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GNE05_09265 PF00391 PEP-utilising enzyme, mobile domain GNE05_09285 PF13280 WYL domain GNE05_09285 PF08279 HTH domain GNE05_09290 PF05163 DinB family GNE05_09295 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_09295 PF00107 Zinc-binding dehydrogenase GNE05_09305 PF17094 Uncharacterised protein family (UPF0715) GNE05_09310 PF14268 YoaP-like GNE05_09310 PF00583 Acetyltransferase (GNAT) family GNE05_09315 PF04740 LXG domain of WXG superfamily GNE05_09315 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GNE05_09330 PF16219 Domain of unknown function (DUF4879) GNE05_09340 PF16302 Domain of unknown function (DUF4944) GNE05_09350 PF13021 Domain of unknown function (DUF3885) GNE05_09360 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GNE05_09360 PF18416 N-acetylglucosamine binding protein domain 2 GNE05_09365 PF09680 Family of unknown function GNE05_09370 PF13302 Acetyltransferase (GNAT) domain GNE05_09380 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain GNE05_09380 PF12708 Pectate lyase superfamily protein GNE05_09385 PF00692 dUTPase GNE05_09390 PF05908 Poly-gamma-glutamate hydrolase GNE05_09400 PF10710 Protein of unknown function (DUF2512) GNE05_09410 PF01726 LexA DNA binding domain GNE05_09410 PF00717 Peptidase S24-like GNE05_09415 PF01476 LysM domain GNE05_09420 PF00239 Resolvase, N terminal domain GNE05_09425 PF05979 Bacterial protein of unknown function (DUF896) GNE05_09430 PF00456 Transketolase, thiamine diphosphate binding domain GNE05_09430 PF02780 Transketolase, C-terminal domain GNE05_09430 PF02779 Transketolase, pyrimidine binding domain GNE05_09435 PF10747 Sporulation inhibitor of replication protein SirA GNE05_09440 PF03672 Uncharacterised protein family (UPF0154) GNE05_09445 PF09388 Spo0E like sporulation regulatory protein GNE05_09450 PF02683 Cytochrome C biogenesis protein transmembrane region GNE05_09455 PF00072 Response regulator receiver domain GNE05_09460 PF07301 Protein of unknown function (DUF1453) GNE05_09465 PF11084 Protein of unknown function (DUF2621) GNE05_09475 PF08179 Small acid-soluble spore protein P family GNE05_09485 PF00330 Aconitase family (aconitate hydratase) GNE05_09485 PF00694 Aconitase C-terminal domain GNE05_09490 PF00578 AhpC/TSA family GNE05_09495 PF13040 Fur-regulated basic protein B GNE05_09500 PF08177 Small acid-soluble spore protein N family GNE05_09510 PF03061 Thioesterase superfamily GNE05_09520 PF01521 Iron-sulphur cluster biosynthesis GNE05_09525 PF02660 Glycerol-3-phosphate acyltransferase GNE05_09530 PF13380 CoA binding domain GNE05_09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_09535 PF01751 Toprim domain GNE05_09535 PF00986 DNA gyrase B subunit, carboxyl terminus GNE05_09535 PF00204 DNA gyrase B GNE05_09540 PF03989 DNA gyrase C-terminal domain, beta-propeller GNE05_09540 PF00521 DNA gyrase/topoisomerase IV, subunit A GNE05_09550 PF01235 Sodium:alanine symporter family GNE05_09555 PF00294 pfkB family carbohydrate kinase GNE05_09560 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_09560 PF00107 Zinc-binding dehydrogenase GNE05_09565 PF01081 KDPG and KHG aldolase GNE05_09570 PF03786 D-mannonate dehydratase (UxuA) GNE05_09575 PF00106 short chain dehydrogenase GNE05_09580 PF00356 Bacterial regulatory proteins, lacI family GNE05_09585 PF07690 Major Facilitator Superfamily GNE05_09595 PF13761 Domain of unknown function (DUF4166) GNE05_09600 PF14158 YndJ-like protein GNE05_09615 PF00942 Cellulose binding domain GNE05_09615 PF00150 Cellulase (glycosyl hydrolase family 5) GNE05_09625 PF00512 His Kinase A (phospho-acceptor) domain GNE05_09625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_09630 PF00486 Transcriptional regulatory protein, C terminal GNE05_09630 PF00072 Response regulator receiver domain GNE05_09635 PF02055 Glycosyl hydrolase family 30 TIM-barrel domain GNE05_09635 PF17189 Glycosyl hydrolase family 30 beta sandwich domain GNE05_09640 PF04616 Glycosyl hydrolases family 43 GNE05_09640 PF03422 Carbohydrate binding module (family 6) GNE05_09645 PF00668 Condensation domain GNE05_09645 PF00550 Phosphopantetheine attachment site GNE05_09645 PF00975 Thioesterase domain GNE05_09645 PF13193 AMP-binding enzyme C-terminal domain GNE05_09645 PF00501 AMP-binding enzyme GNE05_09650 PF00501 AMP-binding enzyme GNE05_09650 PF00550 Phosphopantetheine attachment site GNE05_09650 PF00668 Condensation domain GNE05_09650 PF13193 AMP-binding enzyme C-terminal domain GNE05_09655 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_09655 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_09655 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_09655 PF00202 Aminotransferase class-III GNE05_09655 PF00501 AMP-binding enzyme GNE05_09655 PF13193 AMP-binding enzyme C-terminal domain GNE05_09655 PF00668 Condensation domain GNE05_09655 PF00550 Phosphopantetheine attachment site GNE05_09660 PF00698 Acyl transferase domain GNE05_09670 PF01144 Coenzyme A transferase GNE05_09675 PF01144 Coenzyme A transferase GNE05_09685 PF00067 Cytochrome P450 GNE05_09690 PF04055 Radical SAM superfamily GNE05_09690 PF06968 Biotin and Thiamin Synthesis associated domain GNE05_09700 PF00155 Aminotransferase class I and II GNE05_09705 PF00202 Aminotransferase class-III GNE05_09710 PF03744 6-carboxyhexanoate--CoA ligase GNE05_09715 PF04138 GtrA-like protein GNE05_09720 PF00483 Nucleotidyl transferase GNE05_09725 PF09335 SNARE associated Golgi protein GNE05_09730 PF01039 Carboxyl transferase domain GNE05_09735 PF00378 Enoyl-CoA hydratase/isomerase GNE05_09740 PF00682 HMGL-like GNE05_09745 PF00364 Biotin-requiring enzyme GNE05_09750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE05_09750 PF02785 Biotin carboxylase C-terminal domain GNE05_09750 PF00289 Biotin carboxylase, N-terminal domain GNE05_09755 PF00501 AMP-binding enzyme GNE05_09755 PF13193 AMP-binding enzyme C-terminal domain GNE05_09760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE05_09760 PF02770 Acyl-CoA dehydrogenase, middle domain GNE05_09760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE05_09765 PF02638 Glycosyl hydrolase-like 10 GNE05_09770 PF07098 Protein of unknown function (DUF1360) GNE05_09775 PF00975 Thioesterase domain GNE05_09775 PF00550 Phosphopantetheine attachment site GNE05_09775 PF00668 Condensation domain GNE05_09775 PF13193 AMP-binding enzyme C-terminal domain GNE05_09775 PF00501 AMP-binding enzyme GNE05_09780 PF00668 Condensation domain GNE05_09780 PF00550 Phosphopantetheine attachment site GNE05_09780 PF13193 AMP-binding enzyme C-terminal domain GNE05_09780 PF00501 AMP-binding enzyme GNE05_09785 PF00550 Phosphopantetheine attachment site GNE05_09785 PF00668 Condensation domain GNE05_09785 PF13193 AMP-binding enzyme C-terminal domain GNE05_09785 PF00501 AMP-binding enzyme GNE05_09790 PF13193 AMP-binding enzyme C-terminal domain GNE05_09790 PF00501 AMP-binding enzyme GNE05_09790 PF00668 Condensation domain GNE05_09790 PF00550 Phosphopantetheine attachment site GNE05_09795 PF00550 Phosphopantetheine attachment site GNE05_09795 PF13193 AMP-binding enzyme C-terminal domain GNE05_09795 PF00501 AMP-binding enzyme GNE05_09795 PF00668 Condensation domain GNE05_09800 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GNE05_09805 PF01263 Aldose 1-epimerase GNE05_09815 PF16800 IseA DL-endopeptidase inhibitor GNE05_09825 PF00589 Phage integrase family GNE05_09830 PF12728 Helix-turn-helix domain GNE05_09840 PF07690 Major Facilitator Superfamily GNE05_09850 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE05_09850 PF03129 Anticodon binding domain GNE05_09850 PF02824 TGS domain GNE05_09850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE05_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_09855 PF03466 LysR substrate binding domain GNE05_09860 PF08240 Alcohol dehydrogenase GroES-like domain GNE05_09860 PF00107 Zinc-binding dehydrogenase GNE05_09865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GNE05_09865 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_09870 PF01493 GXGXG motif GNE05_09870 PF01645 Conserved region in glutamate synthase GNE05_09870 PF04898 Glutamate synthase central domain GNE05_09870 PF00310 Glutamine amidotransferases class-II GNE05_09875 PF03466 LysR substrate binding domain GNE05_09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_09880 PF01472 PUA domain GNE05_09880 PF00696 Amino acid kinase family GNE05_09885 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE05_09885 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE05_09890 PF02334 Replication terminator protein GNE05_09895 PF00106 short chain dehydrogenase GNE05_09900 PF06103 Bacterial protein of unknown function (DUF948) GNE05_09910 PF07690 Major Facilitator Superfamily GNE05_09915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE05_09915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE05_09920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNE05_09920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNE05_09925 PF01568 Molydopterin dinucleotide binding domain GNE05_09925 PF00384 Molybdopterin oxidoreductase GNE05_09925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNE05_09955 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GNE05_09955 PF04740 LXG domain of WXG superfamily GNE05_09960 PF01588 Putative tRNA binding domain GNE05_09965 PF07883 Cupin domain GNE05_09965 PF12833 Helix-turn-helix domain GNE05_09970 PF00440 Bacterial regulatory proteins, tetR family GNE05_09970 PF13305 Tetracyclin repressor-like, C-terminal domain GNE05_09975 PF00753 Metallo-beta-lactamase superfamily GNE05_09985 PF01022 Bacterial regulatory protein, arsR family GNE05_09995 PF04238 Protein of unknown function (DUF420) GNE05_10000 PF18846 Bacterial archaeo-eukaryotic release factor family 5 GNE05_10010 PF02016 LD-carboxypeptidase N-terminal domain GNE05_10010 PF17676 LD-carboxypeptidase C-terminal domain GNE05_10020 PF01476 LysM domain GNE05_10020 PF06725 3D domain GNE05_10025 PF00570 HRDC domain GNE05_10025 PF00270 DEAD/DEAH box helicase GNE05_10025 PF00271 Helicase conserved C-terminal domain GNE05_10025 PF09382 RQC domain GNE05_10025 PF16124 RecQ zinc-binding GNE05_10035 PF02525 Flavodoxin-like fold GNE05_10040 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNE05_10055 PF00011 Hsp20/alpha crystallin family GNE05_10070 PF08000 Bacterial PH domain GNE05_10085 PF00171 Aldehyde dehydrogenase family GNE05_10090 PF13243 Squalene-hopene cyclase C-terminal domain GNE05_10090 PF13249 Squalene-hopene cyclase N-terminal domain GNE05_10095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNE05_10095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNE05_10100 PF00209 Sodium:neurotransmitter symporter family GNE05_10105 PF01758 Sodium Bile acid symporter family GNE05_10110 PF00753 Metallo-beta-lactamase superfamily GNE05_10115 PF02817 e3 binding domain GNE05_10115 PF00364 Biotin-requiring enzyme GNE05_10115 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE05_10120 PF02779 Transketolase, pyrimidine binding domain GNE05_10120 PF00676 Dehydrogenase E1 component GNE05_10120 PF16870 2-oxoglutarate dehydrogenase C-terminal GNE05_10125 PF00092 von Willebrand factor type A domain GNE05_10130 PF07728 AAA domain (dynein-related subfamily) GNE05_10135 PF00080 Copper/zinc superoxide dismutase (SODC) GNE05_10135 PF13627 Prokaryotic lipoprotein-attachment site GNE05_10140 PF01476 LysM domain GNE05_10140 PF00877 NlpC/P60 family GNE05_10145 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GNE05_10150 PF10372 Bacterial membrane-spanning protein N-terminus GNE05_10150 PF02457 DisA bacterial checkpoint controller nucleotide-binding GNE05_10155 PF01554 MatE GNE05_10160 PF01740 STAS domain GNE05_10165 PF02585 GlcNAc-PI de-N-acetylase GNE05_10170 PF08830 Protein of unknown function (DUF1806) GNE05_10180 PF00892 EamA-like transporter family GNE05_10195 PF14552 Tautomerase enzyme GNE05_10205 PF01638 HxlR-like helix-turn-helix GNE05_10210 PF00881 Nitroreductase family GNE05_10215 PF01738 Dienelactone hydrolase family GNE05_10220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_10225 PF11755 Protein of unknown function (DUF3311) GNE05_10230 PF00474 Sodium:solute symporter family GNE05_10240 PF00232 Glycosyl hydrolase family 1 GNE05_10245 PF07702 UTRA domain GNE05_10245 PF00392 Bacterial regulatory proteins, gntR family GNE05_10250 PF01471 Putative peptidoglycan binding domain GNE05_10250 PF17820 PDZ domain GNE05_10250 PF03572 Peptidase family S41 GNE05_10255 PF08241 Methyltransferase domain GNE05_10265 PF02557 D-alanyl-D-alanine carboxypeptidase GNE05_10270 PF01048 Phosphorylase superfamily GNE05_10280 PF14191 YodL-like GNE05_10285 PF01569 PAP2 superfamily GNE05_10290 PF14162 YozD-like protein GNE05_10300 PF06855 YozE SAM-like fold GNE05_10305 PF14122 YokU-like protein, putative antitoxin GNE05_10310 PF12544 Lysine-2,3-aminomutase GNE05_10315 PF00583 Acetyltransferase (GNAT) family GNE05_10320 PF07687 Peptidase dimerisation domain GNE05_10320 PF01546 Peptidase family M20/M25/M40 GNE05_10325 PF01144 Coenzyme A transferase GNE05_10330 PF01144 Coenzyme A transferase GNE05_10335 PF00202 Aminotransferase class-III GNE05_10340 PF06445 GyrI-like small molecule binding domain GNE05_10350 PF00583 Acetyltransferase (GNAT) family GNE05_10355 PF00535 Glycosyl transferase family 2 GNE05_10370 PF12996 DUF based on E. rectale Gene description (DUF3880) GNE05_10375 PF02333 Phytase GNE05_10380 PF02719 Polysaccharide biosynthesis protein GNE05_10380 PF08485 Polysaccharide biosynthesis protein C-terminal GNE05_10390 PF11518 Protein of unknown function (DUF3221) GNE05_10410 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_10430 PF16219 Domain of unknown function (DUF4879) GNE05_10455 PF04740 LXG domain of WXG superfamily GNE05_10455 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GNE05_10465 PF05901 Excalibur calcium-binding domain GNE05_10465 PF00565 Staphylococcal nuclease homologue GNE05_10480 PF00239 Resolvase, N terminal domain GNE05_10480 PF07508 Recombinase GNE05_10485 PF02719 Polysaccharide biosynthesis protein GNE05_10490 PF01641 SelR domain GNE05_10495 PF01625 Peptide methionine sulfoxide reductase GNE05_10500 PF01047 MarR family GNE05_10505 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) GNE05_10510 PF13472 GDSL-like Lipase/Acylhydrolase family GNE05_10515 PF02630 SCO1/SenC GNE05_10520 PF10751 Protein of unknown function (DUF2535) GNE05_10525 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_10525 PF00585 C-terminal regulatory domain of Threonine dehydratase GNE05_10530 PF00158 Sigma-54 interaction domain GNE05_10530 PF08461 Ribonuclease R winged-helix domain GNE05_10535 PF03006 Haemolysin-III related GNE05_10550 PF00186 Dihydrofolate reductase GNE05_10555 PF00303 Thymidylate synthase GNE05_10560 PF14005 YpjP-like protein GNE05_10565 PF04445 Putative SAM-dependent methyltransferase GNE05_10570 PF06491 Disulphide isomerase GNE05_10575 PF00920 Dehydratase family GNE05_10580 PF08712 Scaffold protein Nfu/NifU N terminal GNE05_10580 PF13769 Virulence factor GNE05_10585 PF01966 HD domain GNE05_10590 PF00255 Glutathione peroxidase GNE05_10595 PF04204 Homoserine O-succinyltransferase GNE05_10600 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GNE05_10600 PF00534 Glycosyl transferases group 1 GNE05_10610 PF00313 'Cold-shock' DNA-binding domain GNE05_10620 PF10819 Protein of unknown function (DUF2564) GNE05_10625 PF10782 Zinc-finger GNE05_10630 PF13456 Reverse transcriptase-like GNE05_10635 PF02592 Putative vitamin uptake transporter GNE05_10640 PF13456 Reverse transcriptase-like GNE05_10650 PF01367 5'-3' exonuclease, C-terminal SAM fold GNE05_10650 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNE05_10660 PF10752 Protein of unknown function (DUF2533) GNE05_10665 PF00350 Dynamin family GNE05_10675 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GNE05_10680 PF00195 Chalcone and stilbene synthases, N-terminal domain GNE05_10680 PF02797 Chalcone and stilbene synthases, C-terminal domain GNE05_10700 PF00857 Isochorismatase family GNE05_10720 PF13443 Cro/C1-type HTH DNA-binding domain GNE05_10760 PF00149 Calcineurin-like phosphoesterase GNE05_10790 PF00186 Dihydrofolate reductase GNE05_10795 PF00303 Thymidylate synthase GNE05_10820 PF00692 dUTPase GNE05_10830 PF00085 Thioredoxin GNE05_10840 PF13392 HNH endonuclease GNE05_10865 PF00317 Ribonucleotide reductase, all-alpha domain GNE05_10865 PF14528 LAGLIDADG-like domain GNE05_10865 PF02867 Ribonucleotide reductase, barrel domain GNE05_10865 PF08343 Ribonucleotide reductase N-terminal GNE05_10870 PF07972 NrdI Flavodoxin like GNE05_10960 PF00145 C-5 cytosine-specific DNA methylase GNE05_10970 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) GNE05_10975 PF02223 Thymidylate kinase GNE05_10980 PF09629 YorP protein GNE05_10985 PF06725 3D domain GNE05_10990 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNE05_10990 PF14579 Helix-hairpin-helix motif GNE05_10990 PF02811 PHP domain GNE05_10990 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNE05_10995 PF01368 DHH family GNE05_10995 PF17768 RecJ OB domain GNE05_11005 PF03796 DnaB-like helicase C terminal domain GNE05_11035 PF13229 Right handed beta helix region GNE05_11040 PF05908 Poly-gamma-glutamate hydrolase GNE05_11055 PF02586 SOS response associated peptidase (SRAP) GNE05_11060 PF01068 ATP dependent DNA ligase domain GNE05_11105 PF09643 YopX protein GNE05_11135 PF13443 Cro/C1-type HTH DNA-binding domain GNE05_11145 PF14072 DNA-sulfur modification-associated GNE05_11215 PF08808 RES domain GNE05_11220 PF13443 Cro/C1-type HTH DNA-binding domain GNE05_11230 PF01757 Acyltransferase family GNE05_11295 PF00216 Bacterial DNA-binding protein GNE05_11435 PF13495 Phage integrase, N-terminal SAM-like domain GNE05_11435 PF00589 Phage integrase family GNE05_11455 PF01551 Peptidase family M23 GNE05_11455 PF01464 Transglycosylase SLT domain GNE05_11455 PF10145 Phage-related minor tail protein GNE05_11460 PF05709 Phage tail protein GNE05_11475 PF12708 Pectate lyase superfamily protein GNE05_11475 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain GNE05_11480 PF01510 N-acetylmuramoyl-L-alanine amidase GNE05_11480 PF01471 Putative peptidoglycan binding domain GNE05_11500 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_11505 PF11799 impB/mucB/samB family C-terminal domain GNE05_11505 PF11798 IMS family HHH motif GNE05_11505 PF00817 impB/mucB/samB family GNE05_11510 PF08863 YolD-like protein GNE05_11515 PF09560 Sporulation protein YunB (Spo_YunB) GNE05_11540 PF04740 LXG domain of WXG superfamily GNE05_11540 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH GNE05_11545 PF05901 Excalibur calcium-binding domain GNE05_11545 PF00565 Staphylococcal nuclease homologue GNE05_11560 PF00156 Phosphoribosyl transferase domain GNE05_11565 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GNE05_11570 PF13307 Helicase C-terminal domain GNE05_11580 PF14139 YpzG-like protein GNE05_11585 PF02926 THUMP domain GNE05_11585 PF01170 Putative RNA methylase family UPF0020 GNE05_11595 PF05103 DivIVA protein GNE05_11600 PF06908 YspA SLOG family GNE05_11605 PF11122 Inner spore coat protein D GNE05_11615 PF13482 RNase_H superfamily GNE05_11620 PF00270 DEAD/DEAH box helicase GNE05_11620 PF09369 Domain of unknown function (DUF1998) GNE05_11620 PF00271 Helicase conserved C-terminal domain GNE05_11625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GNE05_11635 PF14179 YppG-like protein GNE05_11640 PF14178 YppF-like protein GNE05_11645 PF08807 Bacterial domain of unknown function (DUF1798) GNE05_11650 PF17522 Family of unknown function (DUF5446) GNE05_11660 PF10720 Protein of unknown function (DUF2515) GNE05_11665 PF03838 Recombination protein U GNE05_11670 PF00905 Penicillin binding protein transpeptidase domain GNE05_11670 PF00912 Transglycosylase GNE05_11680 PF00730 HhH-GPD superfamily base excision DNA repair protein GNE05_11680 PF00633 Helix-hairpin-helix motif GNE05_11680 PF10576 Iron-sulfur binding domain of endonuclease III GNE05_11685 PF07261 Replication initiation and membrane attachment GNE05_11690 PF00152 tRNA synthetases class II (D, K and N) GNE05_11690 PF01336 OB-fold nucleic acid binding domain GNE05_11695 PF00155 Aminotransferase class I and II GNE05_11700 PF03413 Peptidase propeptide and YPEB domain GNE05_11700 PF17881 Domain of unknown function (DUF5590) GNE05_11705 PF14084 Protein of unknown function (DUF4264) GNE05_11710 PF00929 Exonuclease GNE05_11710 PF04851 Type III restriction enzyme, res subunit GNE05_11710 PF13307 Helicase C-terminal domain GNE05_11715 PF02261 Aspartate decarboxylase GNE05_11720 PF02569 Pantoate-beta-alanine ligase GNE05_11725 PF02548 Ketopantoate hydroxymethyltransferase GNE05_11730 PF03099 Biotin/lipoate A/B protein ligase family GNE05_11730 PF08279 HTH domain GNE05_11730 PF02237 Biotin protein ligase C terminal domain GNE05_11735 PF13735 tRNA nucleotidyltransferase domain 2 putative GNE05_11735 PF12627 Probable RNA and SrmB- binding site of polymerase A GNE05_11735 PF01743 Poly A polymerase head domain GNE05_11740 PF00534 Glycosyl transferases group 1 GNE05_11740 PF13439 Glycosyltransferase Family 4 GNE05_11745 PF02585 GlcNAc-PI de-N-acetylase GNE05_11750 PF02142 MGS-like domain GNE05_11755 PF05173 Dihydrodipicolinate reductase, C-terminus GNE05_11755 PF01113 Dihydrodipicolinate reductase, N-terminus GNE05_11760 PF03819 MazG nucleotide pyrophosphohydrolase domain GNE05_11765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_11765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE05_11770 PF00190 Cupin GNE05_11775 PF09577 Sporulation protein YpjB (SpoYpjB) GNE05_11780 PF07187 Protein of unknown function (DUF1405) GNE05_11785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNE05_11785 PF00032 Cytochrome b(C-terminal)/b6/petD GNE05_11790 PF00033 Cytochrome b/b6/petB GNE05_11795 PF00355 Rieske [2Fe-2S] domain GNE05_11800 PF10673 Protein of unknown function (DUF2487) GNE05_11805 PF08858 IDEAL domain GNE05_11805 PF08864 UPF0302 domain GNE05_11815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNE05_11820 PF02153 Prephenate dehydrogenase GNE05_11820 PF01842 ACT domain GNE05_11825 PF00155 Aminotransferase class I and II GNE05_11830 PF00290 Tryptophan synthase alpha chain GNE05_11835 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_11840 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GNE05_11845 PF00218 Indole-3-glycerol phosphate synthase GNE05_11850 PF02885 Glycosyl transferase family, helical bundle domain GNE05_11850 PF00591 Glycosyl transferase family, a/b domain GNE05_11855 PF00425 chorismate binding enzyme GNE05_11855 PF04715 Anthranilate synthase component I, N terminal region GNE05_11860 PF07736 Chorismate mutase type I GNE05_11865 PF01761 3-dehydroquinate synthase GNE05_11870 PF01264 Chorismate synthase GNE05_11875 PF01739 CheR methyltransferase, SAM binding domain GNE05_11875 PF03705 CheR methyltransferase, all-alpha domain GNE05_11880 PF00334 Nucleoside diphosphate kinase GNE05_11885 PF00348 Polyprenyl synthetase GNE05_11890 PF01209 ubiE/COQ5 methyltransferase family GNE05_11895 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GNE05_11900 PF02081 Tryptophan RNA-binding attenuator protein GNE05_11905 PF01227 GTP cyclohydrolase I GNE05_11910 PF00216 Bacterial DNA-binding protein GNE05_11915 PF09547 Stage IV sporulation protein A (spore_IV_A) GNE05_11925 PF10966 Protein of unknown function (DUF2768) GNE05_11930 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GNE05_11930 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GNE05_11935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GNE05_11935 PF01926 50S ribosome-binding GTPase GNE05_11945 PF14140 YpzI-like protein GNE05_11950 PF01070 FMN-dependent dehydrogenase GNE05_11955 PF00575 S1 RNA binding domain GNE05_11960 PF02224 Cytidylate kinase GNE05_11965 PF17313 Family of unknown function (DUF5359) GNE05_11970 PF07238 PilZ domain GNE05_11970 PF12945 Flagellar protein YcgR GNE05_11975 PF14620 YpeB sporulation GNE05_11975 PF03413 Peptidase propeptide and YPEB domain GNE05_11980 PF01471 Putative peptidoglycan binding domain GNE05_11980 PF07486 Cell Wall Hydrolase GNE05_11985 PF13367 PrsW family intramembrane metalloprotease GNE05_11995 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNE05_11995 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNE05_12000 PF05389 Negative regulator of genetic competence (MecA) GNE05_12005 PF00149 Calcineurin-like phosphoesterase GNE05_12010 PF10864 Protein of unknown function (DUF2663) GNE05_12015 PF01476 LysM domain GNE05_12020 PF02517 CPBP intramembrane metalloprotease GNE05_12025 PF00270 DEAD/DEAH box helicase GNE05_12025 PF00271 Helicase conserved C-terminal domain GNE05_12030 PF14493 Helix-turn-helix domain GNE05_12040 PF12822 ECF transporter, substrate-specific component GNE05_12045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNE05_12045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNE05_12045 PF01842 ACT domain GNE05_12055 PF04542 Sigma-70 region 2 GNE05_12055 PF08281 Sigma-70, region 4 GNE05_12060 PF00989 PAS fold GNE05_12060 PF00512 His Kinase A (phospho-acceptor) domain GNE05_12060 PF00672 HAMP domain GNE05_12060 PF18698 Histidine kinase sensor domain GNE05_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_12065 PF00486 Transcriptional regulatory protein, C terminal GNE05_12065 PF00072 Response regulator receiver domain GNE05_12070 PF01578 Cytochrome C assembly protein GNE05_12075 PF05140 ResB-like family GNE05_12080 PF00578 AhpC/TSA family GNE05_12085 PF01479 S4 domain GNE05_12085 PF00849 RNA pseudouridylate synthase GNE05_12090 PF07670 Nucleoside recognition GNE05_12095 PF07670 Nucleoside recognition GNE05_12100 PF07943 Penicillin-binding protein 5, C-terminal domain GNE05_12100 PF00768 D-alanyl-D-alanine carboxypeptidase GNE05_12105 PF13047 Protein of unknown function (DUF3907) GNE05_12110 PF04079 Segregation and condensation complex subunit ScpB GNE05_12115 PF02616 Segregation and condensation protein ScpA GNE05_12125 PF03745 Domain of unknown function (DUF309) GNE05_12130 PF00583 Acetyltransferase (GNAT) family GNE05_12135 PF00885 6,7-dimethyl-8-ribityllumazine synthase GNE05_12140 PF00925 GTP cyclohydrolase II GNE05_12140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GNE05_12145 PF00677 Lumazine binding domain GNE05_12150 PF01872 RibD C-terminal domain GNE05_12150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNE05_12160 PF10502 Signal peptidase, peptidase S26 GNE05_12170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GNE05_12175 PF06207 Protein of unknown function (DUF1002) GNE05_12180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GNE05_12180 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GNE05_12185 PF03323 Bacillus/Clostridium GerA spore germination protein GNE05_12190 PF14097 Stage V sporulation protein AE1 GNE05_12195 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNE05_12200 PF07451 Stage V sporulation protein AD (SpoVAD) GNE05_12205 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GNE05_12210 PF13782 Stage V sporulation protein AB GNE05_12215 PF12164 Stage V sporulation protein AA GNE05_12220 PF04545 Sigma-70, region 4 GNE05_12220 PF04542 Sigma-70 region 2 GNE05_12220 PF04539 Sigma-70 region 3 GNE05_12225 PF13581 Histidine kinase-like ATPase domain GNE05_12230 PF01740 STAS domain GNE05_12235 PF00768 D-alanyl-D-alanine carboxypeptidase GNE05_12235 PF07943 Penicillin-binding protein 5, C-terminal domain GNE05_12240 PF01048 Phosphorylase superfamily GNE05_12245 PF01676 Metalloenzyme superfamily GNE05_12250 PF00589 Phage integrase family GNE05_12250 PF02899 Phage integrase, N-terminal SAM-like domain GNE05_12255 PF14004 Protein of unknown function (DUF4227) GNE05_12260 PF01475 Ferric uptake regulator family GNE05_12265 PF01944 Stage II sporulation protein M GNE05_12280 PF03949 Malic enzyme, NAD binding domain GNE05_12280 PF00390 Malic enzyme, N-terminal domain GNE05_12280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNE05_12285 PF03553 Na+/H+ antiporter family GNE05_12290 PF00206 Lyase GNE05_12290 PF10415 Fumarase C C-terminus GNE05_12295 PF17763 Glutaminase/Asparaginase C-terminal domain GNE05_12295 PF00710 Asparaginase, N-terminal GNE05_12300 PF01381 Helix-turn-helix GNE05_12310 PF00293 NUDIX domain GNE05_12315 PF13072 Mother cell inhibitor of FtsZ GNE05_12320 PF00248 Aldo/keto reductase family GNE05_12330 PF12146 Serine aminopeptidase, S33 GNE05_12335 PF10827 Protein of unknown function (DUF2552) GNE05_12340 PF01521 Iron-sulphur cluster biosynthesis GNE05_12345 PF13673 Acetyltransferase (GNAT) domain GNE05_12345 PF04229 GrpB protein GNE05_12350 PF03992 Antibiotic biosynthesis monooxygenase GNE05_12355 PF00583 Acetyltransferase (GNAT) family GNE05_12360 PF11799 impB/mucB/samB family C-terminal domain GNE05_12360 PF00817 impB/mucB/samB family GNE05_12365 PF08863 YolD-like protein GNE05_12370 PF14164 YqzH-like protein GNE05_12375 PF01594 AI-2E family transporter GNE05_12390 PF00485 Phosphoribulokinase / Uridine kinase family GNE05_12395 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_12400 PF00106 short chain dehydrogenase GNE05_12405 PF00753 Metallo-beta-lactamase superfamily GNE05_12410 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE05_12410 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE05_12415 PF00378 Enoyl-CoA hydratase/isomerase GNE05_12420 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal GNE05_12420 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal GNE05_12425 PF00067 Cytochrome P450 GNE05_12430 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_12430 PF00550 Phosphopantetheine attachment site GNE05_12430 PF08659 KR domain GNE05_12430 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_12430 PF14765 Polyketide synthase dehydratase GNE05_12430 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_12430 PF08242 Methyltransferase domain GNE05_12435 PF00550 Phosphopantetheine attachment site GNE05_12435 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_12435 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_12435 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_12435 PF14765 Polyketide synthase dehydratase GNE05_12435 PF08659 KR domain GNE05_12435 PF08242 Methyltransferase domain GNE05_12440 PF13193 AMP-binding enzyme C-terminal domain GNE05_12440 PF00668 Condensation domain GNE05_12440 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_12440 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_12440 PF14765 Polyketide synthase dehydratase GNE05_12440 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_12440 PF00550 Phosphopantetheine attachment site GNE05_12440 PF08659 KR domain GNE05_12440 PF00501 AMP-binding enzyme GNE05_12445 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_12445 PF00501 AMP-binding enzyme GNE05_12445 PF13193 AMP-binding enzyme C-terminal domain GNE05_12445 PF14765 Polyketide synthase dehydratase GNE05_12445 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_12445 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_12445 PF08659 KR domain GNE05_12445 PF00668 Condensation domain GNE05_12445 PF00550 Phosphopantetheine attachment site GNE05_12450 PF08659 KR domain GNE05_12450 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_12450 PF14765 Polyketide synthase dehydratase GNE05_12450 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_12450 PF00550 Phosphopantetheine attachment site GNE05_12450 PF08242 Methyltransferase domain GNE05_12450 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_12455 PF14765 Polyketide synthase dehydratase GNE05_12455 PF13193 AMP-binding enzyme C-terminal domain GNE05_12455 PF00550 Phosphopantetheine attachment site GNE05_12455 PF08659 KR domain GNE05_12455 PF00668 Condensation domain GNE05_12455 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_12455 PF00501 AMP-binding enzyme GNE05_12455 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_12455 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_12460 PF08242 Methyltransferase domain GNE05_12460 PF14765 Polyketide synthase dehydratase GNE05_12460 PF00109 Beta-ketoacyl synthase, N-terminal domain GNE05_12460 PF02801 Beta-ketoacyl synthase, C-terminal domain GNE05_12460 PF08659 KR domain GNE05_12460 PF16197 Ketoacyl-synthetase C-terminal extension GNE05_12460 PF00550 Phosphopantetheine attachment site GNE05_12470 PF13193 AMP-binding enzyme C-terminal domain GNE05_12470 PF00501 AMP-binding enzyme GNE05_12485 PF00698 Acyl transferase domain GNE05_12485 PF03060 Nitronate monooxygenase GNE05_12490 PF00467 KOW motif GNE05_12490 PF02357 Transcription termination factor nusG GNE05_12500 PF03466 LysR substrate binding domain GNE05_12500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_12510 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNE05_12515 PF12146 Serine aminopeptidase, S33 GNE05_12520 PF00471 Ribosomal protein L33 GNE05_12525 PF12706 Beta-lactamase superfamily domain GNE05_12530 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GNE05_12530 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GNE05_12535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GNE05_12535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GNE05_12540 PF11799 impB/mucB/samB family C-terminal domain GNE05_12540 PF00817 impB/mucB/samB family GNE05_12540 PF11798 IMS family HHH motif GNE05_12550 PF02096 60Kd inner membrane protein GNE05_12555 PF07687 Peptidase dimerisation domain GNE05_12555 PF01546 Peptidase family M20/M25/M40 GNE05_12560 PF01039 Carboxyl transferase domain GNE05_12575 PF03734 L,D-transpeptidase catalytic domain GNE05_12580 PF11728 Putative aromatic acid exporter C-terminal domain GNE05_12580 PF06081 Aromatic acid exporter family member 1 GNE05_12585 PF00005 ABC transporter GNE05_12590 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_12595 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE05_12600 PF06491 Disulphide isomerase GNE05_12605 PF00781 Diacylglycerol kinase catalytic domain GNE05_12610 PF00364 Biotin-requiring enzyme GNE05_12610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GNE05_12610 PF02817 e3 binding domain GNE05_12615 PF02779 Transketolase, pyrimidine binding domain GNE05_12615 PF02780 Transketolase, C-terminal domain GNE05_12620 PF00676 Dehydrogenase E1 component GNE05_12625 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_12625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GNE05_12630 PF00871 Acetokinase family GNE05_12635 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNE05_12635 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNE05_12640 PF01515 Phosphate acetyl/butaryl transferase GNE05_12645 PF02954 Bacterial regulatory protein, Fis family GNE05_12645 PF00989 PAS fold GNE05_12645 PF00158 Sigma-54 interaction domain GNE05_12650 PF11118 Protein of unknown function (DUF2627) GNE05_12660 PF03972 MmgE/PrpD family GNE05_12665 PF00285 Citrate synthase, C-terminal domain GNE05_12670 PF02770 Acyl-CoA dehydrogenase, middle domain GNE05_12670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE05_12670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE05_12675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNE05_12675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNE05_12680 PF02803 Thiolase, C-terminal domain GNE05_12680 PF00108 Thiolase, N-terminal domain GNE05_12685 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE05_12690 PF01520 N-acetylmuramoyl-L-alanine amidase GNE05_12710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GNE05_12715 PF10676 Spore germination protein gerPA/gerPF GNE05_12720 PF10676 Spore germination protein gerPA/gerPF GNE05_12725 PF01168 Alanine racemase, N-terminal domain GNE05_12725 PF00842 Alanine racemase, C-terminal domain GNE05_12730 PF00072 Response regulator receiver domain GNE05_12730 PF08769 Sporulation initiation factor Spo0A C terminal GNE05_12735 PF05580 SpoIVB peptidase S55 GNE05_12735 PF17820 PDZ domain GNE05_12740 PF13476 AAA domain GNE05_12745 PF02863 Arginine repressor, C-terminal domain GNE05_12745 PF01316 Arginine repressor, DNA binding domain GNE05_12750 PF01479 S4 domain GNE05_12750 PF01728 FtsJ-like methyltransferase GNE05_12755 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GNE05_12755 PF02779 Transketolase, pyrimidine binding domain GNE05_12755 PF02780 Transketolase, C-terminal domain GNE05_12760 PF00348 Polyprenyl synthetase GNE05_12765 PF02609 Exonuclease VII small subunit GNE05_12770 PF02601 Exonuclease VII, large subunit GNE05_12770 PF13742 OB-fold nucleic acid binding domain GNE05_12775 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GNE05_12775 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GNE05_12780 PF01029 NusB family GNE05_12785 PF03780 Asp23 family, cell envelope-related function GNE05_12790 PF02785 Biotin carboxylase C-terminal domain GNE05_12790 PF00289 Biotin carboxylase, N-terminal domain GNE05_12790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GNE05_12795 PF00364 Biotin-requiring enzyme GNE05_12800 PF12685 SpoIIIAH-like protein GNE05_12810 PF09581 Stage III sporulation protein AF (Spore_III_AF) GNE05_12815 PF09546 Stage III sporulation protein AE (spore_III_AE) GNE05_12820 PF06686 Stage III sporulation protein AC/AD protein family GNE05_12825 PF06686 Stage III sporulation protein AC/AD protein family GNE05_12830 PF09548 Stage III sporulation protein AB (spore_III_AB) GNE05_12840 PF10942 Protein of unknown function (DUF2619) GNE05_12845 PF08207 Elongation factor P (EF-P) KOW-like domain GNE05_12845 PF09285 Elongation factor P, C-terminal GNE05_12845 PF01132 Elongation factor P (EF-P) OB domain GNE05_12850 PF01321 Creatinase/Prolidase N-terminal domain GNE05_12850 PF00557 Metallopeptidase family M24 GNE05_12855 PF11085 Conserved membrane protein YqhR GNE05_12860 PF07136 Protein of unknown function (DUF1385) GNE05_12870 PF01734 Patatin-like phospholipase GNE05_12875 PF02742 Iron dependent repressor, metal binding and dimerisation domain GNE05_12875 PF01325 Iron dependent repressor, N-terminal DNA binding domain GNE05_12880 PF03099 Biotin/lipoate A/B protein ligase family GNE05_12885 PF00581 Rhodanese-like domain GNE05_12890 PF02347 Glycine cleavage system P-protein GNE05_12895 PF02347 Glycine cleavage system P-protein GNE05_12900 PF08669 Glycine cleavage T-protein C-terminal barrel domain GNE05_12900 PF01571 Aminomethyltransferase folate-binding domain GNE05_12905 PF00271 Helicase conserved C-terminal domain GNE05_12905 PF00176 SNF2 family N-terminal domain GNE05_12910 PF11079 Bacterial protein YqhG of unknown function GNE05_12915 PF08671 Anti-repressor SinI GNE05_12920 PF01381 Helix-turn-helix GNE05_12920 PF08671 Anti-repressor SinI GNE05_12925 PF12389 Camelysin metallo-endopeptidase GNE05_12940 PF13028 Protein of unknown function (DUF3889) GNE05_12945 PF14038 YqzE-like protein GNE05_12950 PF14173 ComG operon protein 7 GNE05_12955 PF15980 Putative Competence protein ComGF GNE05_12965 PF07963 Prokaryotic N-terminal methylation motif GNE05_12970 PF07963 Prokaryotic N-terminal methylation motif GNE05_12975 PF00482 Type II secretion system (T2SS), protein F GNE05_12980 PF00437 Type II/IV secretion system protein GNE05_12985 PF01544 CorA-like Mg2+ transporter protein GNE05_12990 PF00571 CBS domain GNE05_12990 PF01595 Cyclin M transmembrane N-terminal domain GNE05_12990 PF03471 Transporter associated domain GNE05_12995 PF01740 STAS domain GNE05_12995 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain GNE05_13005 PF03960 ArsC family GNE05_13010 PF11117 Protein of unknown function (DUF2626) GNE05_13015 PF00753 Metallo-beta-lactamase superfamily GNE05_13020 PF10958 Protein of unknown function (DUF2759) GNE05_13025 PF01910 Thiamine-binding protein GNE05_13035 PF00246 Zinc carboxypeptidase GNE05_13040 PF00480 ROK family GNE05_13045 PF06014 Bacterial protein of unknown function (DUF910) GNE05_13050 PF03553 Na+/H+ antiporter family GNE05_13060 PF01812 5-formyltetrahydrofolate cyclo-ligase family GNE05_13065 PF00471 Ribosomal protein L33 GNE05_13080 PF00005 ABC transporter GNE05_13085 PF00005 ABC transporter GNE05_13090 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_13095 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_13100 PF12849 PBP superfamily domain GNE05_13110 PF07690 Major Facilitator Superfamily GNE05_13115 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GNE05_13115 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GNE05_13120 PF04306 Protein of unknown function (DUF456) GNE05_13125 PF06691 Protein of unknown function (DUF1189) GNE05_13135 PF04551 GcpE protein GNE05_13150 PF01475 Ferric uptake regulator family GNE05_13155 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_13155 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE05_13160 PF11116 Protein of unknown function (DUF2624) GNE05_13165 PF01261 Xylose isomerase-like TIM barrel GNE05_13170 PF00270 DEAD/DEAH box helicase GNE05_13170 PF00271 Helicase conserved C-terminal domain GNE05_13175 PF14181 YqfQ-like protein GNE05_13180 PF02401 LytB protein GNE05_13185 PF01784 NIF3 (NGG1p interacting factor 3) GNE05_13190 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GNE05_13195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNE05_13200 PF03979 Sigma-70 factor, region 1.1 GNE05_13200 PF04539 Sigma-70 region 3 GNE05_13200 PF04542 Sigma-70 region 2 GNE05_13200 PF00140 Sigma-70 factor, region 1.2 GNE05_13200 PF04545 Sigma-70, region 4 GNE05_13205 PF01807 CHC2 zinc finger GNE05_13205 PF08275 DNA primase catalytic core, N-terminal domain GNE05_13205 PF10410 DnaB-helicase binding domain of primase GNE05_13210 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GNE05_13215 PF03618 Kinase/pyrophosphorylase GNE05_13220 PF00571 CBS domain GNE05_13220 PF08279 HTH domain GNE05_13225 PF02092 Glycyl-tRNA synthetase beta subunit GNE05_13230 PF02091 Glycyl-tRNA synthetase alpha subunit GNE05_13235 PF11967 Recombination protein O N terminal GNE05_13235 PF02565 Recombination protein O C terminal GNE05_13240 PF14006 YqzL-like protein GNE05_13245 PF07650 KH domain GNE05_13245 PF01926 50S ribosome-binding GTPase GNE05_13250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNE05_13255 PF01219 Prokaryotic diacylglycerol kinase GNE05_13260 PF02130 Uncharacterized protein family UPF0054 GNE05_13265 PF07698 7TM receptor with intracellular HD hydrolase GNE05_13265 PF01966 HD domain GNE05_13265 PF07697 7TM-HD extracellular GNE05_13270 PF02562 PhoH-like protein GNE05_13275 PF06898 Putative stage IV sporulation protein YqfD GNE05_13280 PF07873 YabP family GNE05_13290 PF12127 SigmaW regulon antibacterial GNE05_13295 PF01957 NfeD-like C-terminal, partner-binding GNE05_13295 PF01972 Serine dehydrogenase proteinase GNE05_13300 PF09424 Yqey-like protein GNE05_13305 PF01165 Ribosomal protein S21 GNE05_13310 PF02690 Na+/Pi-cotransporter GNE05_13315 PF01938 TRAM domain GNE05_13315 PF04055 Radical SAM superfamily GNE05_13315 PF00919 Uncharacterized protein family UPF0004 GNE05_13320 PF04452 RNA methyltransferase GNE05_13330 PF00684 DnaJ central domain GNE05_13330 PF00226 DnaJ domain GNE05_13330 PF01556 DnaJ C terminal domain GNE05_13335 PF00012 Hsp70 protein GNE05_13340 PF01025 GrpE GNE05_13345 PF01628 HrcA protein C terminal domain GNE05_13350 PF04055 Radical SAM superfamily GNE05_13350 PF06969 HemN C-terminal domain GNE05_13355 PF06421 GTP-binding protein LepA C-terminus GNE05_13355 PF03144 Elongation factor Tu domain 2 GNE05_13355 PF00009 Elongation factor Tu GTP binding domain GNE05_13355 PF00679 Elongation factor G C-terminus GNE05_13360 PF12438 Protein of unknown function (DUF3679) GNE05_13365 PF07454 Stage II sporulation protein P (SpoIIP) GNE05_13370 PF03418 Germination protease GNE05_13375 PF01649 Ribosomal protein S20 GNE05_13380 PF06144 DNA polymerase III, delta subunit GNE05_13390 PF14141 YqzM-like protein GNE05_13395 PF03772 Competence protein GNE05_13395 PF13567 Domain of unknown function (DUF4131) GNE05_13395 PF00753 Metallo-beta-lactamase superfamily GNE05_13400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GNE05_13405 PF10531 SLBB domain GNE05_13410 PF03807 NADP oxidoreductase coenzyme F420-dependent GNE05_13410 PF14748 Pyrroline-5-carboxylate reductase dimerisation GNE05_13415 PF13649 Methyltransferase domain GNE05_13425 PF01966 HD domain GNE05_13430 PF01467 Cytidylyltransferase-like GNE05_13435 PF01985 CRS1 / YhbY (CRM) domain GNE05_13440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GNE05_13440 PF01488 Shikimate / quinate 5-dehydrogenase GNE05_13440 PF08501 Shikimate dehydrogenase substrate binding domain GNE05_13445 PF01926 50S ribosome-binding GTPase GNE05_13455 PF08970 Sporulation inhibitor A GNE05_13460 PF00657 GDSL-like Lipase/Acylhydrolase GNE05_13465 PF01522 Polysaccharide deacetylase GNE05_13470 PF09335 SNARE associated Golgi protein GNE05_13480 PF04545 Sigma-70, region 4 GNE05_13480 PF04542 Sigma-70 region 2 GNE05_13495 PF12833 Helix-turn-helix domain GNE05_13495 PF06445 GyrI-like small molecule binding domain GNE05_13500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_13500 PF03466 LysR substrate binding domain GNE05_13510 PF06146 Phosphate-starvation-inducible E GNE05_13515 PF00512 His Kinase A (phospho-acceptor) domain GNE05_13520 PF00072 Response regulator receiver domain GNE05_13520 PF00486 Transcriptional regulatory protein, C terminal GNE05_13525 PF04235 Protein of unknown function (DUF418) GNE05_13535 PF00583 Acetyltransferase (GNAT) family GNE05_13550 PF07690 Major Facilitator Superfamily GNE05_13555 PF08050 Tetracycline resistance leader peptide GNE05_13560 PF00583 Acetyltransferase (GNAT) family GNE05_13565 PF05163 DinB family GNE05_13585 PF01380 SIS domain GNE05_13585 PF01418 Helix-turn-helix domain, rpiR family GNE05_13590 PF01238 Phosphomannose isomerase type I GNE05_13595 PF02378 Phosphotransferase system, EIIC GNE05_13595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE05_13595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE05_13600 PF08279 HTH domain GNE05_13600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE05_13600 PF00874 PRD domain GNE05_13600 PF05043 Mga helix-turn-helix domain GNE05_13605 PF12706 Beta-lactamase superfamily domain GNE05_13610 PF04073 Aminoacyl-tRNA editing domain GNE05_13615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_13615 PF03466 LysR substrate binding domain GNE05_13620 PF07690 Major Facilitator Superfamily GNE05_13625 PF00667 FAD binding domain GNE05_13625 PF00258 Flavodoxin GNE05_13625 PF00175 Oxidoreductase NAD-binding domain GNE05_13625 PF00067 Cytochrome P450 GNE05_13630 PF16295 Tetracyclin repressor-like, C-terminal domain GNE05_13630 PF00440 Bacterial regulatory proteins, tetR family GNE05_13635 PF08241 Methyltransferase domain GNE05_13640 PF09501 Probable sporulation protein (Bac_small_yrzI) GNE05_13645 PF01226 Formate/nitrite transporter GNE05_13650 PF10057 Uncharacterized conserved protein (DUF2294) GNE05_13655 PF00037 4Fe-4S binding domain GNE05_13655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GNE05_13655 PF01568 Molydopterin dinucleotide binding domain GNE05_13655 PF00384 Molybdopterin oxidoreductase GNE05_13655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNE05_13660 PF07849 Protein of unknown function (DUF1641) GNE05_13665 PF14143 YrhC-like protein GNE05_13670 PF01053 Cys/Met metabolism PLP-dependent enzyme GNE05_13675 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_13680 PF01048 Phosphorylase superfamily GNE05_13685 PF13649 Methyltransferase domain GNE05_13690 PF10750 Protein of unknown function (DUF2536) GNE05_13695 PF07423 Domain of unknown function (DUF1510) GNE05_13700 PF03717 Penicillin-binding Protein dimerisation domain GNE05_13700 PF00905 Penicillin binding protein transpeptidase domain GNE05_13705 PF03449 Transcription elongation factor, N-terminal GNE05_13705 PF01272 Transcription elongation factor, GreA/GreB, C-term GNE05_13710 PF00485 Phosphoribulokinase / Uridine kinase family GNE05_13725 PF01596 O-methyltransferase GNE05_13730 PF02618 YceG-like family GNE05_13735 PF06949 Protein of unknown function (DUF1292) GNE05_13740 PF03652 Holliday junction resolvase GNE05_13745 PF06135 IreB regulatory phosphoprotein GNE05_13750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE05_13750 PF02272 DHHA1 domain GNE05_13750 PF01411 tRNA synthetases class II (A) GNE05_13755 PF01594 AI-2E family transporter GNE05_13760 PF00005 ABC transporter GNE05_13765 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE05_13770 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_13775 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_13780 PF13056 Protein of unknown function (DUF3918) GNE05_13790 PF05239 PRC-barrel domain GNE05_13795 PF13538 UvrD-like helicase C-terminal domain GNE05_13795 PF14490 Helix-hairpin-helix containing domain GNE05_13795 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GNE05_13800 PF07719 Tetratricopeptide repeat GNE05_13800 PF13181 Tetratricopeptide repeat GNE05_13810 PF00266 Aminotransferase class-V GNE05_13815 PF02082 Transcriptional regulator GNE05_13820 PF05496 Holliday junction DNA helicase RuvB P-loop domain GNE05_13820 PF12002 MgsA AAA+ ATPase C terminal GNE05_13820 PF16193 AAA C-terminal domain GNE05_13825 PF00899 ThiF family GNE05_13835 PF02938 GAD domain GNE05_13835 PF00152 tRNA synthetases class II (D, K and N) GNE05_13835 PF01336 OB-fold nucleic acid binding domain GNE05_13840 PF03129 Anticodon binding domain GNE05_13840 PF13393 Histidyl-tRNA synthetase GNE05_13845 PF17449 Uncharacterized YrzK-like GNE05_13850 PF01520 N-acetylmuramoyl-L-alanine amidase GNE05_13850 PF08239 Bacterial SH3 domain GNE05_13855 PF02580 D-Tyr-tRNA(Tyr) deacylase GNE05_13860 PF02824 TGS domain GNE05_13860 PF04607 Region found in RelA / SpoT proteins GNE05_13860 PF13291 ACT domain GNE05_13865 PF00156 Phosphoribosyl transferase domain GNE05_13870 PF17768 RecJ OB domain GNE05_13870 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GNE05_13870 PF01368 DHH family GNE05_13870 PF02272 DHHA1 domain GNE05_13875 PF06305 Lipopolysaccharide assembly protein A domain GNE05_13880 PF02080 TrkA-C domain GNE05_13885 PF07549 SecD/SecF GG Motif GNE05_13885 PF02355 Protein export membrane protein GNE05_13890 PF13797 Post-transcriptional regulator GNE05_13895 PF14667 Polysaccharide biosynthesis C-terminal domain GNE05_13895 PF01943 Polysaccharide biosynthesis protein GNE05_13900 PF04239 Protein of unknown function (DUF421) GNE05_13905 PF12670 Protein of unknown function (DUF3792) GNE05_13910 PF02699 Preprotein translocase subunit GNE05_13915 PF01702 Queuine tRNA-ribosyltransferase GNE05_13920 PF02547 Queuosine biosynthesis protein GNE05_13925 PF11146 Protein of unknown function (DUF2905) GNE05_13930 PF17864 RuvB AAA lid domain GNE05_13930 PF05491 RuvB C-terminal winged helix domain GNE05_13930 PF05496 Holliday junction DNA helicase RuvB P-loop domain GNE05_13935 PF01330 RuvA N terminal domain GNE05_13935 PF07499 RuvA, C-terminal domain GNE05_13940 PF08977 Bypass of Forespore C, N terminal GNE05_13940 PF08955 BofC C-terminal domain GNE05_13950 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GNE05_13955 PF01476 LysM domain GNE05_13960 PF02445 Quinolinate synthetase A protein GNE05_13965 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GNE05_13965 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GNE05_13970 PF00890 FAD binding domain GNE05_13970 PF02910 Fumarate reductase flavoprotein C-term GNE05_13975 PF00266 Aminotransferase class-V GNE05_13980 PF02829 3H domain GNE05_13980 PF08279 HTH domain GNE05_13985 PF01842 ACT domain GNE05_13985 PF00800 Prephenate dehydratase GNE05_13990 PF01842 ACT domain GNE05_13995 PF01018 GTP1/OBG GNE05_13995 PF01926 50S ribosome-binding GTPase GNE05_13995 PF09269 Domain of unknown function (DUF1967) GNE05_14000 PF14682 Sporulation initiation phospho-transferase B, C-terminal GNE05_14000 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNE05_14005 PF01016 Ribosomal L27 protein GNE05_14010 PF04327 Cysteine protease Prp GNE05_14015 PF00829 Ribosomal prokaryotic L21 protein GNE05_14020 PF02163 Peptidase family M50 GNE05_14025 PF01551 Peptidase family M23 GNE05_14030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GNE05_14035 PF03775 Septum formation inhibitor MinC, C-terminal domain GNE05_14040 PF04093 rod shape-determining protein MreD GNE05_14045 PF04085 rod shape-determining protein MreC GNE05_14055 PF04002 RadC-like JAB domain GNE05_14060 PF02545 Maf-like protein GNE05_14065 PF05036 Sporulation related domain GNE05_14070 PF06750 Bacterial Peptidase A24 N-terminal domain GNE05_14070 PF01478 Type IV leader peptidase family GNE05_14075 PF02875 Mur ligase family, glutamate ligase domain GNE05_14075 PF08245 Mur ligase middle domain GNE05_14080 PF08264 Anticodon-binding domain of tRNA GNE05_14080 PF00133 tRNA synthetases class I (I, L, M and V) GNE05_14080 PF10458 Valyl tRNA synthetase tRNA binding arm GNE05_14095 PF01476 LysM domain GNE05_14100 PF00202 Aminotransferase class-III GNE05_14105 PF00490 Delta-aminolevulinic acid dehydratase GNE05_14110 PF02602 Uroporphyrinogen-III synthase HemD GNE05_14115 PF03900 Porphobilinogen deaminase, C-terminal domain GNE05_14115 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GNE05_14120 PF01578 Cytochrome C assembly protein GNE05_14125 PF01488 Shikimate / quinate 5-dehydrogenase GNE05_14125 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GNE05_14125 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GNE05_14135 PF01926 50S ribosome-binding GTPase GNE05_14140 PF00004 ATPase family associated with various cellular activities (AAA) GNE05_14140 PF05362 Lon protease (S16) C-terminal proteolytic domain GNE05_14140 PF02190 ATP-dependent protease La (LON) substrate-binding domain GNE05_14145 PF00004 ATPase family associated with various cellular activities (AAA) GNE05_14145 PF05362 Lon protease (S16) C-terminal proteolytic domain GNE05_14150 PF07724 AAA domain (Cdc48 subfamily) GNE05_14150 PF06689 ClpX C4-type zinc finger GNE05_14150 PF10431 C-terminal, D2-small domain, of ClpB protein GNE05_14155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GNE05_14155 PF05698 Bacterial trigger factor protein (TF) C-terminus GNE05_14155 PF05697 Bacterial trigger factor protein (TF) GNE05_14165 PF00694 Aconitase C-terminal domain GNE05_14170 PF00330 Aconitase family (aconitate hydratase) GNE05_14175 PF00180 Isocitrate/isopropylmalate dehydrogenase GNE05_14180 PF08502 LeuA allosteric (dimerisation) domain GNE05_14180 PF00682 HMGL-like GNE05_14185 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GNE05_14185 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GNE05_14190 PF10369 Small subunit of acetolactate synthase GNE05_14190 PF01842 ACT domain GNE05_14195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE05_14195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE05_14195 PF00205 Thiamine pyrophosphate enzyme, central domain GNE05_14215 PF01420 Type I restriction modification DNA specificity domain GNE05_14220 PF02384 N-6 DNA Methylase GNE05_14225 PF08463 EcoEI R protein C-terminal GNE05_14225 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GNE05_14225 PF04851 Type III restriction enzyme, res subunit GNE05_14225 PF00271 Helicase conserved C-terminal domain GNE05_14250 PF12850 Calcineurin-like phosphoesterase superfamily domain GNE05_14255 PF01725 Ham1 family GNE05_14260 PF03725 3' exoribonuclease family, domain 2 GNE05_14260 PF01138 3' exoribonuclease family, domain 1 GNE05_14265 PF10646 Sporulation and spore germination GNE05_14270 PF01177 Asp/Glu/Hydantoin racemase GNE05_14275 PF01047 MarR family GNE05_14280 PF00196 Bacterial regulatory proteins, luxR family GNE05_14285 PF03061 Thioesterase superfamily GNE05_14290 PF13085 2Fe-2S iron-sulfur cluster binding domain GNE05_14290 PF13183 4Fe-4S dicluster domain GNE05_14295 PF02910 Fumarate reductase flavoprotein C-term GNE05_14295 PF00890 FAD binding domain GNE05_14300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GNE05_14305 PF10702 Protein of unknown function (DUF2507) GNE05_14310 PF00696 Amino acid kinase family GNE05_14310 PF13840 ACT domain GNE05_14310 PF01842 ACT domain GNE05_14315 PF08459 UvrC Helix-hairpin-helix N-terminal GNE05_14315 PF02151 UvrB/uvrC motif GNE05_14315 PF01541 GIY-YIG catalytic domain GNE05_14320 PF00085 Thioredoxin GNE05_14325 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GNE05_14330 PF01012 Electron transfer flavoprotein domain GNE05_14330 PF00766 Electron transfer flavoprotein FAD-binding domain GNE05_14335 PF01012 Electron transfer flavoprotein domain GNE05_14340 PF00378 Enoyl-CoA hydratase/isomerase GNE05_14345 PF00440 Bacterial regulatory proteins, tetR family GNE05_14345 PF08359 YsiA-like protein, C-terminal region GNE05_14350 PF13193 AMP-binding enzyme C-terminal domain GNE05_14350 PF00501 AMP-binding enzyme GNE05_14355 PF10924 Protein of unknown function (DUF2711) GNE05_14360 PF03994 Domain of Unknown Function (DUF350) GNE05_14365 PF00488 MutS domain V GNE05_14365 PF01713 Smr domain GNE05_14370 PF14791 DNA polymerase beta thumb GNE05_14370 PF14716 Helix-hairpin-helix domain GNE05_14370 PF02811 PHP domain GNE05_14375 PF02674 Colicin V production protein GNE05_14380 PF05164 Cell division protein ZapA GNE05_14385 PF11858 Domain of unknown function (DUF3378) GNE05_14385 PF01351 Ribonuclease HII GNE05_14395 PF03483 B3/4 domain GNE05_14395 PF03484 tRNA synthetase B5 domain GNE05_14395 PF01588 Putative tRNA binding domain GNE05_14395 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GNE05_14395 PF03147 Ferredoxin-fold anticodon binding domain GNE05_14400 PF01409 tRNA synthetases class II core domain (F) GNE05_14400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GNE05_14405 PF08032 RNA 2'-O ribose methyltransferase substrate binding GNE05_14405 PF00588 SpoU rRNA Methylase family GNE05_14410 PF14098 Small, acid-soluble spore protein I GNE05_14415 PF17853 GGDEF-like domain GNE05_14415 PF05651 Putative sugar diacid recognition GNE05_14415 PF13556 PucR C-terminal helix-turn-helix domain GNE05_14420 PF01565 FAD binding domain GNE05_14420 PF02913 FAD linked oxidases, C-terminal domain GNE05_14425 PF13183 4Fe-4S dicluster domain GNE05_14425 PF02754 Cysteine-rich domain GNE05_14430 PF13722 5TM C-terminal transporter carbon starvation CstA GNE05_14430 PF02554 Carbon starvation protein CstA GNE05_14435 PF06964 Alpha-L-arabinofuranosidase C-terminal domain GNE05_14440 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_14445 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_14450 PF01547 Bacterial extracellular solute-binding protein GNE05_14455 PF13685 Iron-containing alcohol dehydrogenase GNE05_14460 PF13344 Haloacid dehalogenase-like hydrolase GNE05_14465 PF00596 Class II Aldolase and Adducin N-terminal domain GNE05_14470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE05_14470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE05_14475 PF02610 L-arabinose isomerase GNE05_14475 PF11762 L-arabinose isomerase C-terminal domain GNE05_14480 PF04616 Glycosyl hydrolases family 43 GNE05_14485 PF05343 M42 glutamyl aminopeptidase GNE05_14495 PF06961 Protein of unknown function (DUF1294) GNE05_14500 PF00453 Ribosomal protein L20 GNE05_14505 PF01632 Ribosomal protein L35 GNE05_14510 PF05198 Translation initiation factor IF-3, N-terminal domain GNE05_14510 PF00707 Translation initiation factor IF-3, C-terminal domain GNE05_14515 PF04172 LrgB-like family GNE05_14520 PF03788 LrgA family GNE05_14525 PF00072 Response regulator receiver domain GNE05_14525 PF04397 LytTr DNA-binding domain GNE05_14530 PF06580 Histidine kinase GNE05_14530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_14530 PF07694 5TMR of 5TMR-LYT GNE05_14535 PF13419 Haloacid dehalogenase-like hydrolase GNE05_14540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GNE05_14540 PF02824 TGS domain GNE05_14540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GNE05_14540 PF03129 Anticodon binding domain GNE05_14545 PF08812 YtxC-like family GNE05_14550 PF09335 SNARE associated Golgi protein GNE05_14555 PF07319 Primosomal protein DnaI N-terminus GNE05_14555 PF01695 IstB-like ATP binding protein GNE05_14560 PF07261 Replication initiation and membrane attachment GNE05_14565 PF03477 ATP cone domain GNE05_14570 PF02675 S-adenosylmethionine decarboxylase GNE05_14575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNE05_14575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNE05_14580 PF01638 HxlR-like helix-turn-helix GNE05_14585 PF07690 Major Facilitator Superfamily GNE05_14590 PF00248 Aldo/keto reductase family GNE05_14595 PF01121 Dephospho-CoA kinase GNE05_14600 PF02659 Putative manganese efflux pump GNE05_14605 PF06827 Zinc finger found in FPG and IleRS GNE05_14605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GNE05_14605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GNE05_14610 PF01367 5'-3' exonuclease, C-terminal SAM fold GNE05_14610 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GNE05_14610 PF00476 DNA polymerase family A GNE05_14615 PF16736 Single Cache-like GNE05_14615 PF00989 PAS fold GNE05_14615 PF00512 His Kinase A (phospho-acceptor) domain GNE05_14615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_14620 PF00486 Transcriptional regulatory protein, C terminal GNE05_14620 PF00072 Response regulator receiver domain GNE05_14625 PF00056 lactate/malate dehydrogenase, NAD binding domain GNE05_14625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GNE05_14630 PF00180 Isocitrate/isopropylmalate dehydrogenase GNE05_14635 PF00285 Citrate synthase, C-terminal domain GNE05_14640 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_14660 PF11208 Protein of unknown function (DUF2992) GNE05_14665 PF01510 N-acetylmuramoyl-L-alanine amidase GNE05_14670 PF04284 Protein of unknown function (DUF441) GNE05_14675 PF01594 AI-2E family transporter GNE05_14680 PF04186 FxsA cytoplasmic membrane protein GNE05_14685 PF00391 PEP-utilising enzyme, mobile domain GNE05_14685 PF02887 Pyruvate kinase, alpha/beta domain GNE05_14685 PF00224 Pyruvate kinase, barrel domain GNE05_14690 PF00365 Phosphofructokinase GNE05_14695 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GNE05_14700 PF01039 Carboxyl transferase domain GNE05_14700 PF17848 Acetyl-coA carboxylase zinc finger domain GNE05_14705 PF00390 Malic enzyme, N-terminal domain GNE05_14705 PF03949 Malic enzyme, NAD binding domain GNE05_14710 PF01336 OB-fold nucleic acid binding domain GNE05_14710 PF02811 PHP domain GNE05_14710 PF14579 Helix-hairpin-helix motif GNE05_14710 PF07733 Bacterial DNA polymerase III alpha NTPase domain GNE05_14710 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GNE05_14715 PF14034 Sporulation protein YtrH GNE05_14730 PF02272 DHHA1 domain GNE05_14730 PF01368 DHH family GNE05_14735 PF14007 YtpI-like protein GNE05_14740 PF03061 Thioesterase superfamily GNE05_14740 PF00571 CBS domain GNE05_14740 PF07085 DRTGG domain GNE05_14740 PF00392 Bacterial regulatory proteins, gntR family GNE05_14755 PF00206 Lyase GNE05_14755 PF14698 Argininosuccinate lyase C-terminal GNE05_14760 PF00764 Arginosuccinate synthase GNE05_14765 PF00994 Probable molybdopterin binding domain GNE05_14770 PF00871 Acetokinase family GNE05_14775 PF02384 N-6 DNA Methylase GNE05_14780 PF08534 Redoxin GNE05_14785 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GNE05_14790 PF11167 Protein of unknown function (DUF2953) GNE05_14795 PF06271 RDD family GNE05_14800 PF01343 Peptidase family S49 GNE05_14805 PF01513 ATP-NAD kinase GNE05_14810 PF07969 Amidohydrolase family GNE05_14815 PF00501 AMP-binding enzyme GNE05_14815 PF13193 AMP-binding enzyme C-terminal domain GNE05_14820 PF00269 Small, acid-soluble spore proteins, alpha/beta type GNE05_14825 PF02568 Thiamine biosynthesis protein (ThiI) GNE05_14825 PF02926 THUMP domain GNE05_14830 PF00266 Aminotransferase class-V GNE05_14835 PF05525 Branched-chain amino acid transport protein GNE05_14840 PF06160 Septation ring formation regulator, EzrA GNE05_14845 PF02811 PHP domain GNE05_14850 PF00440 Bacterial regulatory proteins, tetR family GNE05_14855 PF13185 GAF domain GNE05_14860 PF00990 Diguanylate cyclase, GGDEF domain GNE05_14870 PF01479 S4 domain GNE05_14870 PF00163 Ribosomal protein S4/S9 N-terminal domain GNE05_14875 PF00171 Aldehyde dehydrogenase family GNE05_14895 PF00175 Oxidoreductase NAD-binding domain GNE05_14895 PF00970 Oxidoreductase FAD-binding domain GNE05_14895 PF00042 Globin GNE05_14905 PF01965 DJ-1/PfpI family GNE05_14920 PF16916 Dimerisation domain of Zinc Transporter GNE05_14920 PF01545 Cation efflux family GNE05_14925 PF11495 Archaeal transcriptional regulator TrmB GNE05_14925 PF01978 Sugar-specific transcriptional regulator TrmB GNE05_14940 PF01479 S4 domain GNE05_14940 PF00579 tRNA synthetases class I (W and Y) GNE05_14945 PF13193 AMP-binding enzyme C-terminal domain GNE05_14945 PF00501 AMP-binding enzyme GNE05_14950 PF00583 Acetyltransferase (GNAT) family GNE05_14955 PF00571 CBS domain GNE05_14960 PF00850 Histone deacetylase domain GNE05_14965 PF00691 OmpA family GNE05_14965 PF13677 Membrane MotB of proton-channel complex MotA/MotB GNE05_14970 PF01618 MotA/TolQ/ExbB proton channel family GNE05_14975 PF00356 Bacterial regulatory proteins, lacI family GNE05_14980 PF01817 Chorismate mutase type II GNE05_14980 PF00793 DAHP synthetase I family GNE05_14985 PF11009 Protein of unknown function (DUF2847) GNE05_14990 PF12732 YtxH-like protein GNE05_14995 PF06103 Bacterial protein of unknown function (DUF948) GNE05_15000 PF01225 Mur ligase family, catalytic domain GNE05_15000 PF02875 Mur ligase family, glutamate ligase domain GNE05_15000 PF08245 Mur ligase middle domain GNE05_15005 PF01580 FtsK/SpoIIIE family GNE05_15005 PF09397 Ftsk gamma domain GNE05_15005 PF17854 FtsK alpha domain GNE05_15010 PF01588 Putative tRNA binding domain GNE05_15010 PF14794 Domain of unknown function (DUF4479) GNE05_15015 PF07285 Protein of unknown function (DUF1444) GNE05_15020 PF00085 Thioredoxin GNE05_15025 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ GNE05_15030 PF05343 M42 glutamyl aminopeptidase GNE05_15035 PF03413 Peptidase propeptide and YPEB domain GNE05_15040 PF03949 Malic enzyme, NAD binding domain GNE05_15040 PF00390 Malic enzyme, N-terminal domain GNE05_15045 PF00753 Metallo-beta-lactamase superfamily GNE05_15050 PF02390 Putative methyltransferase GNE05_15055 PF14165 YtzH-like protein GNE05_15060 PF01636 Phosphotransferase enzyme family GNE05_15065 PF00781 Diacylglycerol kinase catalytic domain GNE05_15080 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_15085 PF01546 Peptidase family M20/M25/M40 GNE05_15090 PF00860 Permease family GNE05_15095 PF05975 Bacterial ABC transporter protein EcsB GNE05_15100 PF00005 ABC transporter GNE05_15105 PF08220 DeoR-like helix-turn-helix domain GNE05_15110 PF00849 RNA pseudouridylate synthase GNE05_15110 PF01479 S4 domain GNE05_15115 PF01943 Polysaccharide biosynthesis protein GNE05_15115 PF14667 Polysaccharide biosynthesis C-terminal domain GNE05_15125 PF02028 BCCT, betaine/carnitine/choline family transporter GNE05_15135 PF10957 Sporulation protein Cse60 GNE05_15140 PF00356 Bacterial regulatory proteins, lacI family GNE05_15145 PF01547 Bacterial extracellular solute-binding protein GNE05_15150 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_15155 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_15160 PF11975 Family 4 glycosyl hydrolase C-terminal domain GNE05_15160 PF02056 Family 4 glycosyl hydrolase GNE05_15170 PF00581 Rhodanese-like domain GNE05_15175 PF09334 tRNA synthetases class I (M) GNE05_15175 PF13603 Leucyl-tRNA synthetase, Domain 2 GNE05_15175 PF00133 tRNA synthetases class I (I, L, M and V) GNE05_15175 PF08264 Anticodon-binding domain of tRNA GNE05_15180 PF14074 Protein of unknown function (DUF4257) GNE05_15185 PF13426 PAS domain GNE05_15185 PF01740 STAS domain GNE05_15195 PF07690 Major Facilitator Superfamily GNE05_15200 PF09529 Integral membrane protein (intg_mem_TP0381) GNE05_15205 PF02687 FtsX-like permease family GNE05_15210 PF00005 ABC transporter GNE05_15215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_15220 PF00072 Response regulator receiver domain GNE05_15220 PF00486 Transcriptional regulatory protein, C terminal GNE05_15225 PF12704 MacB-like periplasmic core domain GNE05_15225 PF02687 FtsX-like permease family GNE05_15230 PF00005 ABC transporter GNE05_15250 PF00005 ABC transporter GNE05_15255 PF00392 Bacterial regulatory proteins, gntR family GNE05_15260 PF10732 Protein of unknown function (DUF2524) GNE05_15265 PF01022 Bacterial regulatory protein, arsR family GNE05_15270 PF07690 Major Facilitator Superfamily GNE05_15275 PF04055 Radical SAM superfamily GNE05_15275 PF16199 Radical_SAM C-terminal domain GNE05_15280 PF06962 Putative rRNA methylase GNE05_15290 PF03009 Glycerophosphoryl diester phosphodiesterase family GNE05_15295 PF10776 Protein of unknown function (DUF2600) GNE05_15300 PF12146 Serine aminopeptidase, S33 GNE05_15305 PF00132 Bacterial transferase hexapeptide (six repeats) GNE05_15310 PF00324 Amino acid permease GNE05_15315 PF00733 Asparagine synthase GNE05_15315 PF13537 Glutamine amidotransferase domain GNE05_15320 PF02773 S-adenosylmethionine synthetase, C-terminal domain GNE05_15320 PF00438 S-adenosylmethionine synthetase, N-terminal domain GNE05_15320 PF02772 S-adenosylmethionine synthetase, central domain GNE05_15325 PF01293 Phosphoenolpyruvate carboxykinase GNE05_15330 PF10763 Protein of unknown function (DUF2584) GNE05_15335 PF00326 Prolyl oligopeptidase family GNE05_15345 PF00005 ABC transporter GNE05_15350 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_15355 PF00293 NUDIX domain GNE05_15360 PF05105 Bacteriophage holin family GNE05_15365 PF00210 Ferritin-like domain GNE05_15375 PF13115 YtkA-like GNE05_15380 PF02664 S-Ribosylhomocysteinase (LuxS) GNE05_15385 PF01809 Putative membrane protein insertion efficiency factor GNE05_15390 PF00484 Carbonic anhydrase GNE05_15395 PF01197 Ribosomal protein L31 GNE05_15400 PF01654 Cytochrome bd terminal oxidase subunit I GNE05_15405 PF02322 Cytochrome bd terminal oxidase subunit II GNE05_15410 PF07561 Domain of Unknown Function (DUF1540) GNE05_15415 PF00950 ABC 3 transport family GNE05_15420 PF00950 ABC 3 transport family GNE05_15425 PF00005 ABC transporter GNE05_15430 PF01297 Zinc-uptake complex component A periplasmic GNE05_15435 PF13378 Enolase C-terminal domain-like GNE05_15435 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GNE05_15440 PF13193 AMP-binding enzyme C-terminal domain GNE05_15440 PF00501 AMP-binding enzyme GNE05_15445 PF00378 Enoyl-CoA hydratase/isomerase GNE05_15450 PF00561 alpha/beta hydrolase fold GNE05_15455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE05_15455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE05_15455 PF16582 Middle domain of thiamine pyrophosphate GNE05_15460 PF00425 chorismate binding enzyme GNE05_15465 PF01258 Prokaryotic dksA/traR C4-type zinc finger GNE05_15470 PF03073 TspO/MBR family GNE05_15595 PF09515 Thiamine transporter protein (Thia_YuaJ) GNE05_15655 PF01551 Peptidase family M23 GNE05_15655 PF10145 Phage-related minor tail protein GNE05_15655 PF01464 Transglycosylase SLT domain GNE05_15695 PF00239 Resolvase, N terminal domain GNE05_15695 PF02796 Helix-turn-helix domain of resolvase GNE05_15815 PF12867 DinB superfamily GNE05_15825 PF00465 Iron-containing alcohol dehydrogenase GNE05_15830 PF00171 Aldehyde dehydrogenase family GNE05_15840 PF17735 Biofilm surface layer A GNE05_15845 PF02254 TrkA-N domain GNE05_15845 PF02080 TrkA-C domain GNE05_15850 PF13457 GW (Gly-Tryp) dipeptide domain GNE05_15850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GNE05_15855 PF00175 Oxidoreductase NAD-binding domain GNE05_15855 PF00970 Oxidoreductase FAD-binding domain GNE05_15855 PF00042 Globin GNE05_15875 PF02673 Bacitracin resistance protein BacA GNE05_15880 PF01594 AI-2E family transporter GNE05_15885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNE05_15885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNE05_15890 PF01965 DJ-1/PfpI family GNE05_15895 PF02743 Cache domain GNE05_15895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_15895 PF00672 HAMP domain GNE05_15900 PF00672 HAMP domain GNE05_15900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_15900 PF02743 Cache domain GNE05_15905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_15905 PF00672 HAMP domain GNE05_15905 PF02743 Cache domain GNE05_15910 PF00672 HAMP domain GNE05_15910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GNE05_15910 PF02743 Cache domain GNE05_15925 PF03060 Nitronate monooxygenase GNE05_15930 PF01894 Uncharacterised protein family UPF0047 GNE05_15935 PF16657 Maltogenic Amylase, C-terminal domain GNE05_15935 PF00128 Alpha amylase, catalytic domain GNE05_15940 PF01595 Cyclin M transmembrane N-terminal domain GNE05_15940 PF03471 Transporter associated domain GNE05_15940 PF00571 CBS domain GNE05_15945 PF04298 Putative neutral zinc metallopeptidase GNE05_15955 PF11458 Membrane-integrating protein Mistic GNE05_15960 PF02254 TrkA-N domain GNE05_15960 PF07885 Ion channel GNE05_15965 PF08868 YugN-like family GNE05_15975 PF00342 Phosphoglucose isomerase GNE05_15980 PF03358 NADPH-dependent FMN reductase GNE05_15985 PF00857 Isochorismatase family GNE05_15990 PF00465 Iron-containing alcohol dehydrogenase GNE05_15995 PF00465 Iron-containing alcohol dehydrogenase GNE05_16000 PF04070 Domain of unknown function (DUF378) GNE05_16005 PF00575 S1 RNA binding domain GNE05_16010 PF00155 Aminotransferase class I and II GNE05_16015 PF01037 Lrp/AsnC ligand binding domain GNE05_16020 PF00561 alpha/beta hydrolase fold GNE05_16020 PF08386 TAP-like protein GNE05_16025 PF08958 Domain of unknown function (DUF1871) GNE05_16030 PF00155 Aminotransferase class I and II GNE05_16035 PF00512 His Kinase A (phospho-acceptor) domain GNE05_16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_16040 PF08810 Kinase associated protein B GNE05_16045 PF00929 Exonuclease GNE05_16050 PF07690 Major Facilitator Superfamily GNE05_16055 PF00912 Transglycosylase GNE05_16055 PF00905 Penicillin binding protein transpeptidase domain GNE05_16060 PF04134 Protein of unknown function, DUF393 GNE05_16065 PF17328 Family of unknown function (DUF5366) GNE05_16070 PF17203 Single cache domain 3 GNE05_16070 PF00989 PAS fold GNE05_16070 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GNE05_16070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_16075 PF00072 Response regulator receiver domain GNE05_16105 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GNE05_16105 PF13244 Domain of unknown function (DUF4040) GNE05_16105 PF00361 Proton-conducting membrane transporter GNE05_16110 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GNE05_16115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GNE05_16120 PF00361 Proton-conducting membrane transporter GNE05_16125 PF01899 Na+/H+ ion antiporter subunit GNE05_16130 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GNE05_16135 PF03334 Na+/H+ antiporter subunit GNE05_16140 PF03061 Thioesterase superfamily GNE05_16145 PF00072 Response regulator receiver domain GNE05_16145 PF00196 Bacterial regulatory proteins, luxR family GNE05_16150 PF07730 Histidine kinase GNE05_16150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_16155 PF05952 Bacillus competence pheromone ComX GNE05_16160 PF00348 Polyprenyl synthetase GNE05_16165 PF08181 DegQ (SacQ) family GNE05_16175 PF08668 HDOD domain GNE05_16175 PF00563 EAL domain GNE05_16180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GNE05_16180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GNE05_16180 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GNE05_16185 PF00857 Isochorismatase family GNE05_16190 PF07997 Protein of unknown function (DUF1694) GNE05_16195 PF14166 YueH-like protein GNE05_16200 PF10676 Spore germination protein gerPA/gerPF GNE05_16205 PF01594 AI-2E family transporter GNE05_16210 PF10842 Protein of unknown function (DUF2642) GNE05_16215 PF01966 HD domain GNE05_16220 PF00106 short chain dehydrogenase GNE05_16225 PF17355 Family of unknown function (DUF5383) GNE05_16235 PF12538 DNA transporter GNE05_16235 PF01580 FtsK/SpoIIIE family GNE05_16240 PF10140 WXG100 protein secretion system (Wss), protein YukC GNE05_16245 PF08817 WXG100 protein secretion system (Wss), protein YukD GNE05_16250 PF06013 Proteins of 100 residues with WXG GNE05_16255 PF13556 PucR C-terminal helix-turn-helix domain GNE05_16255 PF17853 GGDEF-like domain GNE05_16255 PF06018 CodY GAF-like domain GNE05_16260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GNE05_16260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GNE05_16265 PF10042 Uncharacterized conserved protein (DUF2278) GNE05_16270 PF03621 MbtH-like protein GNE05_16275 PF13193 AMP-binding enzyme C-terminal domain GNE05_16275 PF00668 Condensation domain GNE05_16275 PF00550 Phosphopantetheine attachment site GNE05_16275 PF00975 Thioesterase domain GNE05_16275 PF00501 AMP-binding enzyme GNE05_16280 PF00857 Isochorismatase family GNE05_16280 PF00550 Phosphopantetheine attachment site GNE05_16285 PF13193 AMP-binding enzyme C-terminal domain GNE05_16285 PF00501 AMP-binding enzyme GNE05_16290 PF00425 chorismate binding enzyme GNE05_16295 PF00106 short chain dehydrogenase GNE05_16300 PF00756 Putative esterase GNE05_16305 PF00174 Oxidoreductase molybdopterin binding domain GNE05_16310 PF02632 BioY family GNE05_16315 PF13726 Na+-H+ antiporter family GNE05_16315 PF03553 Na+/H+ antiporter family GNE05_16320 PF00883 Cytosol aminopeptidase family, catalytic domain GNE05_16320 PF02789 Cytosol aminopeptidase family, N-terminal domain GNE05_16325 PF02681 Divergent PAP2 family GNE05_16330 PF06725 3D domain GNE05_16335 PF14068 Putative membrane protein GNE05_16340 PF17302 Family of unknown function (DUF5351) GNE05_16345 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_16350 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_16355 PF00478 IMP dehydrogenase / GMP reductase domain GNE05_16370 PF00005 ABC transporter GNE05_16390 PF13302 Acetyltransferase (GNAT) domain GNE05_16395 PF00106 short chain dehydrogenase GNE05_16400 PF01521 Iron-sulphur cluster biosynthesis GNE05_16405 PF01678 Diaminopimelate epimerase GNE05_16410 PF07662 Na+ dependent nucleoside transporter C-terminus GNE05_16410 PF01773 Na+ dependent nucleoside transporter N-terminus GNE05_16415 PF07293 Protein of unknown function (DUF1450) GNE05_16420 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_16425 PF07315 Protein of unknown function (DUF1462) GNE05_16430 PF01106 NifU-like domain GNE05_16435 PF07676 WD40-like Beta Propeller Repeat GNE05_16435 PF00326 Prolyl oligopeptidase family GNE05_16440 PF08544 GHMP kinases C terminal GNE05_16440 PF00288 GHMP kinases N terminal domain GNE05_16445 PF00291 Pyridoxal-phosphate dependent enzyme GNE05_16450 PF03447 Homoserine dehydrogenase, NAD binding domain GNE05_16450 PF00742 Homoserine dehydrogenase GNE05_16450 PF01842 ACT domain GNE05_16460 PF04608 Phosphatidylglycerophosphatase A GNE05_16465 PF13344 Haloacid dehalogenase-like hydrolase GNE05_16470 PF01934 Protein of unknown function DUF86 GNE05_16475 PF06265 Protein of unknown function (DUF1027) GNE05_16480 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GNE05_16480 PF04055 Radical SAM superfamily GNE05_16485 PF01551 Peptidase family M23 GNE05_16490 PF09560 Sporulation protein YunB (Spo_YunB) GNE05_16495 PF02872 5'-nucleotidase, C-terminal domain GNE05_16500 PF01925 Sulfite exporter TauE/SafE GNE05_16505 PF01904 Protein of unknown function DUF72 GNE05_16515 PF01979 Amidohydrolase family GNE05_16520 PF13556 PucR C-terminal helix-turn-helix domain GNE05_16520 PF17853 GGDEF-like domain GNE05_16520 PF07905 Purine catabolism regulatory protein-like family GNE05_16545 PF07690 Major Facilitator Superfamily GNE05_16550 PF00266 Aminotransferase class-V GNE05_16555 PF01546 Peptidase family M20/M25/M40 GNE05_16560 PF04231 Endonuclease I GNE05_16565 PF03459 TOBE domain GNE05_16565 PF17912 MalK OB fold domain GNE05_16565 PF00005 ABC transporter GNE05_16570 PF07702 UTRA domain GNE05_16570 PF00392 Bacterial regulatory proteins, gntR family GNE05_16575 PF00294 pfkB family carbohydrate kinase GNE05_16580 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_16585 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_16590 PF01547 Bacterial extracellular solute-binding protein GNE05_16595 PF01380 SIS domain GNE05_16600 PF13411 MerR HTH family regulatory protein GNE05_16615 PF17418 Sporulation delaying protein SdpA GNE05_16620 PF07853 Protein of unknown function (DUF1648) GNE05_16625 PF01541 GIY-YIG catalytic domain GNE05_16630 PF01266 FAD dependent oxidoreductase GNE05_16635 PF01209 ubiE/COQ5 methyltransferase family GNE05_16640 PF10903 Protein of unknown function (DUF2691) GNE05_16645 PF01374 Glycosyl hydrolase family 46 GNE05_16650 PF01458 Uncharacterized protein family (UPF0051) GNE05_16655 PF01592 NifU-like N terminal domain GNE05_16660 PF00266 Aminotransferase class-V GNE05_16665 PF01458 Uncharacterized protein family (UPF0051) GNE05_16670 PF00005 ABC transporter GNE05_16680 PF02627 Carboxymuconolactone decarboxylase family GNE05_16685 PF03180 NLPA lipoprotein GNE05_16690 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_16695 PF09383 NIL domain GNE05_16695 PF00005 ABC transporter GNE05_16700 PF02036 SCP-2 sterol transfer family GNE05_16705 PF00085 Thioredoxin GNE05_16710 PF01751 Toprim domain GNE05_16715 PF10830 Protein of unknown function (DUF2553) GNE05_16720 PF01597 Glycine cleavage H-protein GNE05_16725 PF03960 ArsC family GNE05_16730 PF02770 Acyl-CoA dehydrogenase, middle domain GNE05_16730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GNE05_16730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GNE05_16735 PF00108 Thiolase, N-terminal domain GNE05_16735 PF02803 Thiolase, C-terminal domain GNE05_16740 PF00378 Enoyl-CoA hydratase/isomerase GNE05_16740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GNE05_16740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GNE05_16745 PF14115 YuzL-like protein GNE05_16750 PF01619 Proline dehydrogenase GNE05_16760 PF07875 Coat F domain GNE05_16765 PF01047 MarR family GNE05_16770 PF07690 Major Facilitator Superfamily GNE05_16775 PF03466 LysR substrate binding domain GNE05_16775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_16780 PF06314 Acetoacetate decarboxylase (ADC) GNE05_16790 PF10835 Protein of unknown function (DUF2573) GNE05_16795 PF00005 ABC transporter GNE05_16800 PF14039 YusW-like protein GNE05_16810 PF00106 short chain dehydrogenase GNE05_16815 PF00210 Ferritin-like domain GNE05_16820 PF13180 PDZ domain GNE05_16825 PF00486 Transcriptional regulatory protein, C terminal GNE05_16825 PF00072 Response regulator receiver domain GNE05_16830 PF00512 His Kinase A (phospho-acceptor) domain GNE05_16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_16830 PF00672 HAMP domain GNE05_16840 PF00440 Bacterial regulatory proteins, tetR family GNE05_16845 PF00206 Lyase GNE05_16845 PF10415 Fumarase C C-terminus GNE05_16850 PF13113 Protein of unknown function (DUF3970) GNE05_16855 PF03323 Bacillus/Clostridium GerA spore germination protein GNE05_16860 PF03845 Spore germination protein GNE05_16865 PF05504 Spore germination B3/ GerAC like, C-terminal GNE05_16870 PF00072 Response regulator receiver domain GNE05_16870 PF00196 Bacterial regulatory proteins, luxR family GNE05_16875 PF00672 HAMP domain GNE05_16875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_16875 PF07730 Histidine kinase GNE05_16880 PF09922 Cell wall-active antibiotics response 4TMS YvqF GNE05_16885 PF13349 Putative adhesin GNE05_16890 PF04012 PspA/IM30 family GNE05_16900 PF07690 Major Facilitator Superfamily GNE05_16905 PF01923 Cobalamin adenosyltransferase GNE05_16910 PF00005 ABC transporter GNE05_16915 PF01032 FecCD transport family GNE05_16920 PF01497 Periplasmic binding protein GNE05_16925 PF00106 short chain dehydrogenase GNE05_16930 PF08450 SMP-30/Gluconolactonase/LRE-like region GNE05_16935 PF00512 His Kinase A (phospho-acceptor) domain GNE05_16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_16940 PF00486 Transcriptional regulatory protein, C terminal GNE05_16940 PF00072 Response regulator receiver domain GNE05_16950 PF04545 Sigma-70, region 4 GNE05_16955 PF12841 YvrJ protein family GNE05_16960 PF00190 Cupin GNE05_16965 PF14184 Regulatory protein YrvL GNE05_16970 PF00005 ABC transporter GNE05_16975 PF01032 FecCD transport family GNE05_16980 PF01032 FecCD transport family GNE05_16985 PF01497 Periplasmic binding protein GNE05_16990 PF04072 Leucine carboxyl methyltransferase GNE05_16995 PF13520 Amino acid permease GNE05_17000 PF09575 Small spore protein J (Spore_SspJ) GNE05_17005 PF04307 LexA-binding, inner membrane-associated putative hydrolase GNE05_17010 PF00884 Sulfatase GNE05_17015 PF12728 Helix-turn-helix domain GNE05_17015 PF12727 PBP superfamily domain GNE05_17025 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17030 PF00072 Response regulator receiver domain GNE05_17030 PF00196 Bacterial regulatory proteins, luxR family GNE05_17035 PF07730 Histidine kinase GNE05_17035 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GNE05_17035 PF00672 HAMP domain GNE05_17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_17040 PF00005 ABC transporter GNE05_17055 PF00248 Aldo/keto reductase family GNE05_17065 PF00999 Sodium/hydrogen exchanger family GNE05_17070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GNE05_17070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GNE05_17075 PF00175 Oxidoreductase NAD-binding domain GNE05_17075 PF00258 Flavodoxin GNE05_17075 PF00667 FAD binding domain GNE05_17080 PF13538 UvrD-like helicase C-terminal domain GNE05_17085 PF03458 UPF0126 domain GNE05_17095 PF02600 Disulfide bond formation protein DsbB GNE05_17100 PF13462 Thioredoxin GNE05_17105 PF00403 Heavy-metal-associated domain GNE05_17110 PF00403 Heavy-metal-associated domain GNE05_17115 PF00403 Heavy-metal-associated domain GNE05_17120 PF02583 Metal-sensitive transcriptional repressor GNE05_17125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNE05_17125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNE05_17130 PF02525 Flavodoxin-like fold GNE05_17135 PF00296 Luciferase-like monooxygenase GNE05_17140 PF00462 Glutaredoxin GNE05_17145 PF00296 Luciferase-like monooxygenase GNE05_17150 PF00005 ABC transporter GNE05_17155 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17160 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17165 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE05_17170 PF00497 Bacterial extracellular solute-binding proteins, family 3 GNE05_17175 PF00583 Acetyltransferase (GNAT) family GNE05_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_17180 PF03466 LysR substrate binding domain GNE05_17185 PF00106 short chain dehydrogenase GNE05_17190 PF01337 Barstar (barnase inhibitor) GNE05_17195 PF01337 Barstar (barnase inhibitor) GNE05_17205 PF01668 SmpB protein GNE05_17210 PF17876 Cold shock domain GNE05_17210 PF08206 Ribonuclease B OB domain GNE05_17210 PF00773 RNB domain GNE05_17210 PF00575 S1 RNA binding domain GNE05_17215 PF12146 Serine aminopeptidase, S33 GNE05_17220 PF03840 Preprotein translocase SecG subunit GNE05_17225 PF01381 Helix-turn-helix GNE05_17240 PF01638 HxlR-like helix-turn-helix GNE05_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_17245 PF00512 His Kinase A (phospho-acceptor) domain GNE05_17250 PF00486 Transcriptional regulatory protein, C terminal GNE05_17250 PF00072 Response regulator receiver domain GNE05_17265 PF00005 ABC transporter GNE05_17275 PF02052 Gallidermin GNE05_17285 PF02052 Gallidermin GNE05_17290 PF05147 Lanthionine synthetase C-like protein GNE05_17295 PF00005 ABC transporter GNE05_17300 PF04738 Lantibiotic dehydratase, N terminus GNE05_17300 PF14028 Lantibiotic biosynthesis dehydratase C-term GNE05_17305 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17310 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNE05_17315 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17320 PF00005 ABC transporter GNE05_17320 PF00571 CBS domain GNE05_17325 PF12802 MarR family GNE05_17330 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17335 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GNE05_17340 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17345 PF00571 CBS domain GNE05_17345 PF00005 ABC transporter GNE05_17350 PF12802 MarR family GNE05_17355 PF01914 MarC family integral membrane protein GNE05_17365 PF13240 zinc-ribbon domain GNE05_17370 PF00583 Acetyltransferase (GNAT) family GNE05_17375 PF00113 Enolase, C-terminal TIM barrel domain GNE05_17375 PF03952 Enolase, N-terminal domain GNE05_17380 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GNE05_17380 PF01676 Metalloenzyme superfamily GNE05_17385 PF00121 Triosephosphate isomerase GNE05_17390 PF00162 Phosphoglycerate kinase GNE05_17395 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GNE05_17395 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GNE05_17400 PF04198 Putative sugar-binding domain GNE05_17405 PF00083 Sugar (and other) transporter GNE05_17410 PF00392 Bacterial regulatory proteins, gntR family GNE05_17415 PF00296 Luciferase-like monooxygenase GNE05_17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_17420 PF03466 LysR substrate binding domain GNE05_17425 PF00892 EamA-like transporter family GNE05_17430 PF00324 Amino acid permease GNE05_17435 PF01380 SIS domain GNE05_17435 PF01418 Helix-turn-helix domain, rpiR family GNE05_17440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GNE05_17440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GNE05_17445 PF02447 GntP family permease GNE05_17450 PF02589 LUD domain GNE05_17455 PF13183 4Fe-4S dicluster domain GNE05_17455 PF11870 Domain of unknown function (DUF3390) GNE05_17455 PF02589 LUD domain GNE05_17460 PF02754 Cysteine-rich domain GNE05_17465 PF00155 Aminotransferase class I and II GNE05_17470 PF00392 Bacterial regulatory proteins, gntR family GNE05_17470 PF07729 FCD domain GNE05_17475 PF02652 L-lactate permease GNE05_17480 PF00309 Sigma-54 factor, Activator interacting domain (AID) GNE05_17480 PF04963 Sigma-54 factor, core binding domain GNE05_17480 PF04552 Sigma-54, DNA binding domain GNE05_17485 PF09628 YvfG protein GNE05_17490 PF04230 Polysaccharide pyruvyl transferase GNE05_17495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNE05_17500 PF17836 PglD N-terminal domain GNE05_17500 PF00132 Bacterial transferase hexapeptide (six repeats) GNE05_17505 PF02397 Bacterial sugar transferase GNE05_17510 PF14667 Polysaccharide biosynthesis C-terminal domain GNE05_17510 PF01943 Polysaccharide biosynthesis protein GNE05_17515 PF00535 Glycosyl transferase family 2 GNE05_17520 PF04230 Polysaccharide pyruvyl transferase GNE05_17525 PF00535 Glycosyl transferase family 2 GNE05_17535 PF00534 Glycosyl transferases group 1 GNE05_17535 PF13439 Glycosyltransferase Family 4 GNE05_17540 PF00535 Glycosyl transferase family 2 GNE05_17545 PF13439 Glycosyltransferase Family 4 GNE05_17545 PF00534 Glycosyl transferases group 1 GNE05_17550 PF02719 Polysaccharide biosynthesis protein GNE05_17555 PF13614 AAA domain GNE05_17560 PF02706 Chain length determinant protein GNE05_17565 PF01381 Helix-turn-helix GNE05_17565 PF08671 Anti-repressor SinI GNE05_17570 PF00135 Carboxylesterase family GNE05_17580 PF01872 RibD C-terminal domain GNE05_17590 PF00583 Acetyltransferase (GNAT) family GNE05_17595 PF05870 Phenolic acid decarboxylase (PAD) GNE05_17630 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNE05_17630 PF08244 Glycosyl hydrolases family 32 C terminal GNE05_17635 PF01306 LacY proton/sugar symporter GNE05_17640 PF00356 Bacterial regulatory proteins, lacI family GNE05_17645 PF00574 Clp protease GNE05_17650 PF13419 Haloacid dehalogenase-like hydrolase GNE05_17655 PF16657 Maltogenic Amylase, C-terminal domain GNE05_17655 PF00128 Alpha amylase, catalytic domain GNE05_17660 PF03632 Glycosyl hydrolase family 65 central catalytic domain GNE05_17660 PF03633 Glycosyl hydrolase family 65, C-terminal domain GNE05_17660 PF03636 Glycosyl hydrolase family 65, N-terminal domain GNE05_17665 PF06691 Protein of unknown function (DUF1189) GNE05_17670 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17675 PF00528 Binding-protein-dependent transport system inner membrane component GNE05_17680 PF13416 Bacterial extracellular solute-binding protein GNE05_17685 PF02903 Alpha amylase, N-terminal ig-like domain GNE05_17685 PF00128 Alpha amylase, catalytic domain GNE05_17690 PF00356 Bacterial regulatory proteins, lacI family GNE05_17695 PF03641 Possible lysine decarboxylase GNE05_17700 PF03819 MazG nucleotide pyrophosphohydrolase domain GNE05_17705 PF00916 Sulfate permease family GNE05_17705 PF01740 STAS domain GNE05_17710 PF00484 Carbonic anhydrase GNE05_17715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GNE05_17715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GNE05_17720 PF00545 ribonuclease GNE05_17725 PF00797 N-acetyltransferase GNE05_17730 PF00381 PTS HPr component phosphorylation site GNE05_17735 PF10298 WhiA N-terminal LAGLIDADG-like domain GNE05_17735 PF02650 WhiA C-terminal HTH domain GNE05_17735 PF14527 WhiA LAGLIDADG-like domain GNE05_17740 PF01933 Uncharacterised protein family UPF0052 GNE05_17745 PF03668 P-loop ATPase protein family GNE05_17750 PF00293 NUDIX domain GNE05_17755 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_17760 PF00877 NlpC/P60 family GNE05_17770 PF18698 Histidine kinase sensor domain GNE05_17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_17770 PF00989 PAS fold GNE05_17770 PF00672 HAMP domain GNE05_17770 PF00512 His Kinase A (phospho-acceptor) domain GNE05_17775 PF00486 Transcriptional regulatory protein, C terminal GNE05_17775 PF00072 Response regulator receiver domain GNE05_17780 PF00664 ABC transporter transmembrane region GNE05_17780 PF00005 ABC transporter GNE05_17785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GNE05_17785 PF01502 Phosphoribosyl-AMP cyclohydrolase GNE05_17790 PF00977 Histidine biosynthesis protein GNE05_17795 PF00977 Histidine biosynthesis protein GNE05_17800 PF00117 Glutamine amidotransferase class-I GNE05_17805 PF00475 Imidazoleglycerol-phosphate dehydratase GNE05_17810 PF00815 Histidinol dehydrogenase GNE05_17815 PF01634 ATP phosphoribosyltransferase GNE05_17820 PF13393 Histidyl-tRNA synthetase GNE05_17825 PF13529 Peptidase_C39 like family GNE05_17830 PF14602 Hexapeptide repeat of succinyl-transferase GNE05_17835 PF13419 Haloacid dehalogenase-like hydrolase GNE05_17840 PF01790 Prolipoprotein diacylglyceryl transferase GNE05_17845 PF07475 HPr Serine kinase C-terminal domain GNE05_17845 PF02603 HPr Serine kinase N terminus GNE05_17850 PF01979 Amidohydrolase family GNE05_17855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GNE05_17860 PF07702 UTRA domain GNE05_17860 PF00392 Bacterial regulatory proteins, gntR family GNE05_17865 PF00440 Bacterial regulatory proteins, tetR family GNE05_17870 PF00149 Calcineurin-like phosphoesterase GNE05_17875 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GNE05_17880 PF04024 PspC domain GNE05_17885 PF13349 Putative adhesin GNE05_17900 PF00005 ABC transporter GNE05_17900 PF17755 UvrA DNA-binding domain GNE05_17900 PF17760 UvrA interaction domain GNE05_17905 PF04851 Type III restriction enzyme, res subunit GNE05_17905 PF00271 Helicase conserved C-terminal domain GNE05_17905 PF02151 UvrB/uvrC motif GNE05_17905 PF12344 Ultra-violet resistance protein B GNE05_17905 PF17757 UvrB interaction domain GNE05_17910 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) GNE05_17915 PF00391 PEP-utilising enzyme, mobile domain GNE05_17915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GNE05_17920 PF00440 Bacterial regulatory proteins, tetR family GNE05_17925 PF07690 Major Facilitator Superfamily GNE05_17930 PF00975 Thioesterase domain GNE05_17940 PF17820 PDZ domain GNE05_17945 PF17423 Swarming motility protein GNE05_17950 PF01471 Putative peptidoglycan binding domain GNE05_17950 PF03572 Peptidase family S41 GNE05_17950 PF17820 PDZ domain GNE05_17955 PF13229 Right handed beta helix region GNE05_17960 PF18075 FtsX extracellular domain GNE05_17960 PF02687 FtsX-like permease family GNE05_17965 PF00005 ABC transporter GNE05_17970 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GNE05_17975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_17975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE05_17985 PF01043 SecA preprotein cross-linking domain GNE05_17985 PF02810 SEC-C motif GNE05_17985 PF07516 SecA Wing and Scaffold domain GNE05_17985 PF07517 SecA DEAD-like domain GNE05_17990 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GNE05_17990 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GNE05_18005 PF02561 Flagellar protein FliS GNE05_18010 PF07196 Flagellin hook IN motif GNE05_18010 PF07195 Flagellar hook-associated protein 2 C-terminus GNE05_18010 PF02465 Flagellar hook-associated protein 2 N-terminus GNE05_18015 PF00700 Bacterial flagellin C-terminal helical region GNE05_18015 PF00669 Bacterial flagellin N-terminal helical region GNE05_18020 PF02599 Global regulator protein family GNE05_18025 PF02623 FliW protein GNE05_18035 PF00700 Bacterial flagellin C-terminal helical region GNE05_18035 PF00669 Bacterial flagellin N-terminal helical region GNE05_18040 PF00460 Flagella basal body rod protein GNE05_18040 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE05_18045 PF05130 FlgN protein GNE05_18050 PF04316 Anti-sigma-28 factor, FlgM GNE05_18065 PF10719 Late competence development protein ComFB GNE05_18070 PF00271 Helicase conserved C-terminal domain GNE05_18070 PF04851 Type III restriction enzyme, res subunit GNE05_18075 PF02645 Uncharacterised protein, DegV family COG1307 GNE05_18080 PF00072 Response regulator receiver domain GNE05_18080 PF00196 Bacterial regulatory proteins, luxR family GNE05_18085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_18085 PF07730 Histidine kinase GNE05_18085 PF05384 Sensor protein DegS GNE05_18090 PF01205 Uncharacterized protein family UPF0029 GNE05_18090 PF09186 Domain of unknown function (DUF1949) GNE05_18095 PF03816 Cell envelope-related transcriptional attenuator domain GNE05_18100 PF00953 Glycosyl transferase family 4 GNE05_18110 PF00535 Glycosyl transferase family 2 GNE05_18115 PF02706 Chain length determinant protein GNE05_18120 PF04932 O-Antigen ligase GNE05_18125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNE05_18125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNE05_18125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNE05_18130 PF13439 Glycosyltransferase Family 4 GNE05_18130 PF00534 Glycosyl transferases group 1 GNE05_18135 PF01943 Polysaccharide biosynthesis protein GNE05_18135 PF14667 Polysaccharide biosynthesis C-terminal domain GNE05_18140 PF02397 Bacterial sugar transferase GNE05_18145 PF04122 Putative cell wall binding repeat 2 GNE05_18145 PF01520 N-acetylmuramoyl-L-alanine amidase GNE05_18150 PF04122 Putative cell wall binding repeat 2 GNE05_18150 PF08486 Stage II sporulation protein GNE05_18160 PF03816 Cell envelope-related transcriptional attenuator domain GNE05_18165 PF02350 UDP-N-acetylglucosamine 2-epimerase GNE05_18170 PF00483 Nucleotidyl transferase GNE05_18175 PF00005 ABC transporter GNE05_18180 PF01061 ABC-2 type transporter GNE05_18190 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNE05_18195 PF00534 Glycosyl transferases group 1 GNE05_18195 PF09318 Glycosyl transferase 1 domain A GNE05_18200 PF01467 Cytidylyltransferase-like GNE05_18205 PF03808 Glycosyl transferase WecB/TagA/CpsF family GNE05_18210 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNE05_18215 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GNE05_18215 PF08239 Bacterial SH3 domain GNE05_18215 PF05036 Sporulation related domain GNE05_18220 PF01238 Phosphomannose isomerase type I GNE05_18225 PF03323 Bacillus/Clostridium GerA spore germination protein GNE05_18230 PF03845 Spore germination protein GNE05_18235 PF05504 Spore germination B3/ GerAC like, C-terminal GNE05_18245 PF00083 Sugar (and other) transporter GNE05_18250 PF03816 Cell envelope-related transcriptional attenuator domain GNE05_18260 PF04791 LMBR1-like membrane protein GNE05_18265 PF00877 NlpC/P60 family GNE05_18275 PF09587 Bacterial capsule synthesis protein PGA_cap GNE05_18280 PF14102 Capsule biosynthesis CapC GNE05_18285 PF08245 Mur ligase middle domain GNE05_18290 PF03323 Bacillus/Clostridium GerA spore germination protein GNE05_18295 PF03845 Spore germination protein GNE05_18305 PF00356 Bacterial regulatory proteins, lacI family GNE05_18310 PF00294 pfkB family carbohydrate kinase GNE05_18315 PF05025 RbsD / FucU transport protein family GNE05_18320 PF00005 ABC transporter GNE05_18325 PF02653 Branched-chain amino acid transport system / permease component GNE05_18330 PF13407 Periplasmic binding protein domain GNE05_18335 PF08239 Bacterial SH3 domain GNE05_18340 PF02525 Flavodoxin-like fold GNE05_18345 PF03306 Alpha-acetolactate decarboxylase GNE05_18350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE05_18350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE05_18350 PF00205 Thiamine pyrophosphate enzyme, central domain GNE05_18355 PF03466 LysR substrate binding domain GNE05_18355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_18360 PF02040 Arsenical pump membrane protein GNE05_18375 PF08757 CotH kinase protein GNE05_18385 PF01613 Flavin reductase like domain GNE05_18400 PF13404 AsnC-type helix-turn-helix domain GNE05_18400 PF01037 Lrp/AsnC ligand binding domain GNE05_18405 PF02417 Chromate transporter GNE05_18410 PF02417 Chromate transporter GNE05_18420 PF03358 NADPH-dependent FMN reductase GNE05_18425 PF03466 LysR substrate binding domain GNE05_18425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_18430 PF04493 Endonuclease V GNE05_18475 PF14431 YwqJ-like deaminase GNE05_18475 PF14449 Pre-toxin TG GNE05_18475 PF04740 LXG domain of WXG superfamily GNE05_18485 PF16888 Domain of unknown function (DUF5082) GNE05_18490 PF09234 Domain of unknown function (DUF1963) GNE05_18495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GNE05_18495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GNE05_18495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GNE05_18505 PF13614 AAA domain GNE05_18510 PF02706 Chain length determinant protein GNE05_18510 PF13807 G-rich domain on putative tyrosine kinase GNE05_18520 PF04434 SWIM zinc finger GNE05_18525 PF12419 SNF2 Helicase protein GNE05_18525 PF00176 SNF2 family N-terminal domain GNE05_18525 PF00271 Helicase conserved C-terminal domain GNE05_18535 PF08220 DeoR-like helix-turn-helix domain GNE05_18535 PF00455 DeoR C terminal sensor domain GNE05_18540 PF00436 Single-strand binding protein family GNE05_18550 PF14183 YwpF-like protein GNE05_18555 PF01741 Large-conductance mechanosensitive channel, MscL GNE05_18560 PF07977 FabA-like domain GNE05_18565 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_18570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE05_18570 PF00460 Flagella basal body rod protein GNE05_18575 PF00460 Flagella basal body rod protein GNE05_18575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GNE05_18585 PF12116 Stage III sporulation protein D GNE05_18590 PF01047 MarR family GNE05_18595 PF07690 Major Facilitator Superfamily GNE05_18600 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GNE05_18605 PF07690 Major Facilitator Superfamily GNE05_18610 PF00857 Isochorismatase family GNE05_18615 PF00909 Ammonium Transporter Family GNE05_18620 PF00543 Nitrogen regulatory protein P-II GNE05_18625 PF01098 Cell cycle protein GNE05_18630 PF01569 PAP2 superfamily GNE05_18635 PF04892 VanZ like family GNE05_18640 PF01551 Peptidase family M23 GNE05_18645 PF00583 Acetyltransferase (GNAT) family GNE05_18650 PF17319 Family of unknown function (DUF5362) GNE05_18655 PF17370 Family of unknown function (DUF5392) GNE05_18660 PF13091 PLD-like domain GNE05_18660 PF13396 Phospholipase_D-nuclease N-terminal GNE05_18665 PF17319 Family of unknown function (DUF5362) GNE05_18670 PF00457 Glycosyl hydrolases family 11 GNE05_18675 PF02082 Transcriptional regulator GNE05_18680 PF01979 Amidohydrolase family GNE05_18680 PF00449 Urease alpha-subunit, N-terminal domain GNE05_18685 PF00699 Urease beta subunit GNE05_18690 PF00547 Urease, gamma subunit GNE05_18705 PF17874 MalT-like TPR region GNE05_18705 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_18710 PF06463 Molybdenum Cofactor Synthesis C GNE05_18710 PF04055 Radical SAM superfamily GNE05_18715 PF02634 FdhD/NarQ family GNE05_18720 PF00092 von Willebrand factor type A domain GNE05_18725 PF00092 von Willebrand factor type A domain GNE05_18730 PF08486 Stage II sporulation protein GNE05_18735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNE05_18740 PF08680 TATA-box binding GNE05_18745 PF06612 Protein of unknown function (DUF1146) GNE05_18755 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GNE05_18755 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GNE05_18760 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE05_18760 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNE05_18765 PF00231 ATP synthase GNE05_18770 PF00306 ATP synthase alpha/beta chain, C terminal domain GNE05_18770 PF02874 ATP synthase alpha/beta family, beta-barrel domain GNE05_18770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE05_18775 PF00213 ATP synthase delta (OSCP) subunit GNE05_18780 PF00430 ATP synthase B/B' CF(0) GNE05_18785 PF00137 ATP synthase subunit C GNE05_18790 PF00119 ATP synthase A chain GNE05_18795 PF03899 ATP synthase I chain GNE05_18805 PF00464 Serine hydroxymethyltransferase GNE05_18810 PF04260 Protein of unknown function (DUF436) GNE05_18815 PF02502 Ribose/Galactose Isomerase GNE05_18820 PF01451 Low molecular weight phosphotyrosine protein phosphatase GNE05_18825 PF02659 Putative manganese efflux pump GNE05_18830 PF01300 Telomere recombination GNE05_18830 PF03481 Putative GTP-binding controlling metal-binding GNE05_18840 PF09551 Stage II sporulation protein R (spore_II_R) GNE05_18845 PF17094 Uncharacterised protein family (UPF0715) GNE05_18850 PF17247 Family of unknown function (DUF5316) GNE05_18855 PF17827 PrmC N-terminal domain GNE05_18855 PF05175 Methyltransferase small domain GNE05_18860 PF00472 RF-1 domain GNE05_18860 PF03462 PCRF domain GNE05_18865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_18870 PF13411 MerR HTH family regulatory protein GNE05_18875 PF03547 Membrane transport protein GNE05_18880 PF03949 Malic enzyme, NAD binding domain GNE05_18880 PF00390 Malic enzyme, N-terminal domain GNE05_18885 PF00265 Thymidine kinase GNE05_18890 PF01197 Ribosomal protein L31 GNE05_18895 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GNE05_18895 PF07498 Rho termination factor, N-terminal domain GNE05_18895 PF07497 Rho termination factor, RNA-binding domain GNE05_18900 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GNE05_18905 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GNE05_18910 PF00923 Transaldolase/Fructose-6-phosphate aldolase GNE05_18915 PF01116 Fructose-bisphosphate aldolase class-II GNE05_18920 PF00072 Response regulator receiver domain GNE05_18925 PF10740 Domain of unknown function (DUF2529) GNE05_18930 PF06418 CTP synthase N-terminus GNE05_18930 PF00117 Glutamine amidotransferase class-I GNE05_18935 PF05066 HB1, ASXL, restriction endonuclease HTH domain GNE05_18940 PF13183 4Fe-4S dicluster domain GNE05_18940 PF02754 Cysteine-rich domain GNE05_18945 PF13091 PLD-like domain GNE05_18950 PF03851 UV-endonuclease UvdE GNE05_18960 PF00664 ABC transporter transmembrane region GNE05_18960 PF00005 ABC transporter GNE05_18965 PF13091 PLD-like domain GNE05_18965 PF13396 Phospholipase_D-nuclease N-terminal GNE05_18975 PF02665 Nitrate reductase gamma subunit GNE05_18980 PF02613 Nitrate reductase delta subunit GNE05_18985 PF13247 4Fe-4S dicluster domain GNE05_18985 PF14711 Respiratory nitrate reductase beta C-terminal GNE05_18990 PF00384 Molybdopterin oxidoreductase GNE05_18990 PF01568 Molydopterin dinucleotide binding domain GNE05_18990 PF14710 Respiratory nitrate reductase alpha N-terminal GNE05_19000 PF14256 YwiC-like protein GNE05_19005 PF00325 Bacterial regulatory proteins, crp family GNE05_19005 PF00027 Cyclic nucleotide-binding domain GNE05_19010 PF07690 Major Facilitator Superfamily GNE05_19015 PF05746 DALR anticodon binding domain GNE05_19015 PF03485 Arginyl tRNA synthetase N terminal domain GNE05_19015 PF00750 tRNA synthetases class I (R) GNE05_19020 PF09148 Domain of unknown function (DUF1934) GNE05_19025 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_19070 PF00491 Arginase family GNE05_19075 PF17284 Spermidine synthase tetramerisation domain GNE05_19080 PF00905 Penicillin binding protein transpeptidase domain GNE05_19080 PF00912 Transglycosylase GNE05_19090 PF08741 YwhD family GNE05_19095 PF02163 Peptidase family M50 GNE05_19100 PF01361 Tautomerase enzyme GNE05_19105 PF01047 MarR family GNE05_19115 PF13520 Amino acid permease GNE05_19125 PF01966 HD domain GNE05_19130 PF07293 Protein of unknown function (DUF1450) GNE05_19140 PF03551 Transcriptional regulator PadR-like family GNE05_19150 PF00005 ABC transporter GNE05_19155 PF12679 ABC-2 family transporter protein GNE05_19180 PF03099 Biotin/lipoate A/B protein ligase family GNE05_19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_19185 PF03466 LysR substrate binding domain GNE05_19190 PF03601 Conserved hypothetical protein 698 GNE05_19195 PF01515 Phosphate acetyl/butaryl transferase GNE05_19225 PF00085 Thioredoxin GNE05_19235 PF00155 Aminotransferase class I and II GNE05_19240 PF07690 Major Facilitator Superfamily GNE05_19255 PF07883 Cupin domain GNE05_19265 PF07690 Major Facilitator Superfamily GNE05_19270 PF07690 Major Facilitator Superfamily GNE05_19275 PF00324 Amino acid permease GNE05_19280 PF01546 Peptidase family M20/M25/M40 GNE05_19285 PF00171 Aldehyde dehydrogenase family GNE05_19290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GNE05_19290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GNE05_19295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_19295 PF00512 His Kinase A (phospho-acceptor) domain GNE05_19300 PF00486 Transcriptional regulatory protein, C terminal GNE05_19300 PF00072 Response regulator receiver domain GNE05_19315 PF00005 ABC transporter GNE05_19320 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GNE05_19325 PF04321 RmlD substrate binding domain GNE05_19330 PF16363 GDP-mannose 4,6 dehydratase GNE05_19335 PF00483 Nucleotidyl transferase GNE05_19340 PF04101 Glycosyltransferase family 28 C-terminal domain GNE05_19345 PF02348 Cytidylyltransferase GNE05_19350 PF03102 NeuB family GNE05_19350 PF08666 SAF domain GNE05_19355 PF00583 Acetyltransferase (GNAT) family GNE05_19360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GNE05_19365 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase GNE05_19370 PF00535 Glycosyl transferase family 2 GNE05_19375 PF09671 Spore coat protein (Spore_GerQ) GNE05_19380 PF04241 Protein of unknown function (DUF423) GNE05_19385 PF00860 Permease family GNE05_19390 PF17261 Family of unknown function (DUF5327) GNE05_19395 PF03167 Uracil DNA glycosylase superfamily GNE05_19400 PF00535 Glycosyl transferase family 2 GNE05_19415 PF03551 Transcriptional regulator PadR-like family GNE05_19420 PF08543 Phosphomethylpyrimidine kinase GNE05_19430 PF08244 Glycosyl hydrolases family 32 C terminal GNE05_19430 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNE05_19435 PF02378 Phosphotransferase system, EIIC GNE05_19435 PF00367 phosphotransferase system, EIIB GNE05_19440 PF00874 PRD domain GNE05_19440 PF03123 CAT RNA binding domain GNE05_19450 PF05922 Peptidase inhibitor I9 GNE05_19450 PF02225 PA domain GNE05_19450 PF00082 Subtilase family GNE05_19450 PF13860 FlgD Ig-like domain GNE05_19455 PF00296 Luciferase-like monooxygenase GNE05_19460 PF00881 Nitroreductase family GNE05_19465 PF01098 Cell cycle protein GNE05_19470 PF00583 Acetyltransferase (GNAT) family GNE05_19475 PF17368 Spore morphogenesis and germination YwcE GNE05_19480 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GNE05_19485 PF00510 Cytochrome c oxidase subunit III GNE05_19490 PF00115 Cytochrome C and Quinol oxidase polypeptide I GNE05_19495 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GNE05_19495 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GNE05_19500 PF04226 Transglycosylase associated protein GNE05_19510 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GNE05_19510 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GNE05_19515 PF10509 Galactokinase galactose-binding signature GNE05_19515 PF08544 GHMP kinases C terminal GNE05_19515 PF00288 GHMP kinases N terminal domain GNE05_19520 PF04138 GtrA-like protein GNE05_19525 PF00440 Bacterial regulatory proteins, tetR family GNE05_19530 PF08671 Anti-repressor SinI GNE05_19545 PF01323 DSBA-like thioredoxin domain GNE05_19550 PF10518 TAT (twin-arginine translocation) pathway signal sequence GNE05_19550 PF04261 Dyp-type peroxidase family GNE05_19555 PF09375 Imelysin GNE05_19560 PF02581 Thiamine monophosphate synthase GNE05_19565 PF02110 Hydroxyethylthiazole kinase family GNE05_19570 PF03466 LysR substrate binding domain GNE05_19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GNE05_19575 PF03788 LrgA family GNE05_19580 PF04172 LrgB-like family GNE05_19585 PF09962 Uncharacterized conserved protein (DUF2196) GNE05_19590 PF13411 MerR HTH family regulatory protein GNE05_19590 PF07739 TipAS antibiotic-recognition domain GNE05_19595 PF10026 Predicted Zn-dependent protease (DUF2268) GNE05_19600 PF17785 PUA-like domain GNE05_19600 PF10672 S-adenosylmethionine-dependent methyltransferase GNE05_19605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_19610 PF02378 Phosphotransferase system, EIIC GNE05_19615 PF00082 Subtilase family GNE05_19620 PF01501 Glycosyl transferase family 8 GNE05_19625 PF01047 MarR family GNE05_19630 PF00579 tRNA synthetases class I (W and Y) GNE05_19630 PF01479 S4 domain GNE05_19635 PF04607 Region found in RelA / SpoT proteins GNE05_19640 PF01040 UbiA prenyltransferase family GNE05_19645 PF12459 D-Ala-teichoic acid biosynthesis protein GNE05_19650 PF00501 AMP-binding enzyme GNE05_19650 PF13193 AMP-binding enzyme C-terminal domain GNE05_19655 PF03062 MBOAT, membrane-bound O-acyltransferase family GNE05_19660 PF00550 Phosphopantetheine attachment site GNE05_19665 PF04914 DltD protein GNE05_19670 PF01063 Amino-transferase class IV GNE05_19675 PF11975 Family 4 glycosyl hydrolase C-terminal domain GNE05_19675 PF02056 Family 4 glycosyl hydrolase GNE05_19680 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GNE05_19685 PF02378 Phosphotransferase system, EIIC GNE05_19690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE05_19695 PF00874 PRD domain GNE05_19695 PF05043 Mga helix-turn-helix domain GNE05_19695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GNE05_19695 PF08279 HTH domain GNE05_19700 PF02245 Methylpurine-DNA glycosylase (MPG) GNE05_19705 PF01032 FecCD transport family GNE05_19710 PF01032 FecCD transport family GNE05_19720 PF01022 Bacterial regulatory protein, arsR family GNE05_19725 PF02040 Arsenical pump membrane protein GNE05_19730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GNE05_19735 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GNE05_19740 PF02378 Phosphotransferase system, EIIC GNE05_19745 PF00232 Glycosyl hydrolase family 1 GNE05_19750 PF00480 ROK family GNE05_19755 PF01238 Phosphomannose isomerase type I GNE05_19760 PF02156 Glycosyl hydrolase family 26 GNE05_19765 PF00199 Catalase GNE05_19765 PF06628 Catalase-related immune-responsive GNE05_19770 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family GNE05_19775 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GNE05_19780 PF01256 Carbohydrate kinase GNE05_19785 PF00005 ABC transporter GNE05_19785 PF00664 ABC transporter transmembrane region GNE05_19790 PF00005 ABC transporter GNE05_19790 PF00664 ABC transporter transmembrane region GNE05_19795 PF02322 Cytochrome bd terminal oxidase subunit II GNE05_19800 PF01654 Cytochrome bd terminal oxidase subunit I GNE05_19805 PF03390 2-hydroxycarboxylate transporter family GNE05_19810 PF01522 Polysaccharide deacetylase GNE05_19815 PF17912 MalK OB fold domain GNE05_19815 PF00005 ABC transporter GNE05_19815 PF03459 TOBE domain GNE05_19820 PF13556 PucR C-terminal helix-turn-helix domain GNE05_19825 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE05_19825 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_19830 PF11611 Domain of unknown function (DUF4352) GNE05_19835 PF16363 GDP-mannose 4,6 dehydratase GNE05_19840 PF01546 Peptidase family M20/M25/M40 GNE05_19840 PF07687 Peptidase dimerisation domain GNE05_19845 PF04525 LURP-one-related GNE05_19850 PF01717 Cobalamin-independent synthase, Catalytic domain GNE05_19855 PF08241 Methyltransferase domain GNE05_19860 PF07662 Na+ dependent nucleoside transporter C-terminus GNE05_19860 PF01773 Na+ dependent nucleoside transporter N-terminus GNE05_19875 PF06628 Catalase-related immune-responsive GNE05_19875 PF18011 C-terminal domain found in long catalases GNE05_19875 PF00199 Catalase GNE05_19880 PF03600 Citrate transporter GNE05_19885 PF00722 Glycosyl hydrolases family 16 GNE05_19890 PF03123 CAT RNA binding domain GNE05_19890 PF00874 PRD domain GNE05_19895 PF11700 Vacuole effluxer Atg22 like GNE05_19900 PF03880 DbpA RNA binding domain GNE05_19900 PF00271 Helicase conserved C-terminal domain GNE05_19900 PF00270 DEAD/DEAH box helicase GNE05_19915 PF14176 YxiJ-like protein GNE05_19955 PF05593 RHS Repeat GNE05_19960 PF00544 Pectate lyase GNE05_19965 PF00892 EamA-like transporter family GNE05_19970 PF00582 Universal stress protein family GNE05_20015 PF00145 C-5 cytosine-specific DNA methylase GNE05_20030 PF16369 C-terminal lipocalin-like domain GNE05_20030 PF04616 Glycosyl hydrolases family 43 GNE05_20035 PF09021 HutP GNE05_20040 PF00221 Aromatic amino acid lyase GNE05_20045 PF17391 Urocanase N-terminal domain GNE05_20045 PF17392 Urocanase C-terminal domain GNE05_20045 PF01175 Urocanase Rossmann-like domain GNE05_20050 PF01979 Amidohydrolase family GNE05_20055 PF00491 Arginase family GNE05_20060 PF00324 Amino acid permease GNE05_20065 PF00591 Glycosyl transferase family, a/b domain GNE05_20065 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GNE05_20065 PF02885 Glycosyl transferase family, helical bundle domain GNE05_20070 PF01773 Na+ dependent nucleoside transporter N-terminus GNE05_20070 PF07662 Na+ dependent nucleoside transporter C-terminus GNE05_20075 PF01791 DeoC/LacD family aldolase GNE05_20080 PF04198 Putative sugar-binding domain GNE05_20095 PF11631 Protein of unknown function (DUF3255) GNE05_20115 PF01497 Periplasmic binding protein GNE05_20120 PF06486 Protein of unknown function (DUF1093) GNE05_20125 PF02687 FtsX-like permease family GNE05_20130 PF00005 ABC transporter GNE05_20135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_20140 PF00486 Transcriptional regulatory protein, C terminal GNE05_20140 PF00072 Response regulator receiver domain GNE05_20145 PF00512 His Kinase A (phospho-acceptor) domain GNE05_20145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_20150 PF00486 Transcriptional regulatory protein, C terminal GNE05_20150 PF00072 Response regulator receiver domain GNE05_20155 PF00005 ABC transporter GNE05_20170 PF01116 Fructose-bisphosphate aldolase class-II GNE05_20175 PF01261 Xylose isomerase-like TIM barrel GNE05_20180 PF01261 Xylose isomerase-like TIM barrel GNE05_20185 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GNE05_20185 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GNE05_20190 PF07690 Major Facilitator Superfamily GNE05_20195 PF01261 Xylose isomerase-like TIM barrel GNE05_20200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GNE05_20200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GNE05_20200 PF00205 Thiamine pyrophosphate enzyme, central domain GNE05_20205 PF00294 pfkB family carbohydrate kinase GNE05_20210 PF04962 KduI/IolB family GNE05_20215 PF00171 Aldehyde dehydrogenase family GNE05_20220 PF00455 DeoR C terminal sensor domain GNE05_20220 PF08220 DeoR-like helix-turn-helix domain GNE05_20225 PF00248 Aldo/keto reductase family GNE05_20230 PF00083 Sugar (and other) transporter GNE05_20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_20235 PF00183 Hsp90 protein GNE05_20250 PF00196 Bacterial regulatory proteins, luxR family GNE05_20250 PF00072 Response regulator receiver domain GNE05_20255 PF07730 Histidine kinase GNE05_20260 PF00487 Fatty acid desaturase GNE05_20270 PF00440 Bacterial regulatory proteins, tetR family GNE05_20275 PF00171 Aldehyde dehydrogenase family GNE05_20280 PF01011 PQQ enzyme repeat GNE05_20280 PF13360 PQQ-like domain GNE05_20280 PF13570 PQQ-like domain GNE05_20285 PF17369 Family of unknown function (DUF5391) GNE05_20295 PF07690 Major Facilitator Superfamily GNE05_20300 PF06271 RDD family GNE05_20310 PF01435 Peptidase family M48 GNE05_20315 PF14338 Mrr N-terminal domain GNE05_20315 PF04471 Restriction endonuclease GNE05_20320 PF00578 AhpC/TSA family GNE05_20325 PF07992 Pyridine nucleotide-disulphide oxidoreductase GNE05_20325 PF13192 Thioredoxin domain GNE05_20330 PF13784 Fic/DOC family N-terminal GNE05_20330 PF02661 Fic/DOC family GNE05_20335 PF00324 Amino acid permease GNE05_20340 PF06874 Firmicute fructose-1,6-bisphosphatase GNE05_20345 PF00111 2Fe-2S iron-sulfur cluster binding domain GNE05_20345 PF01799 [2Fe-2S] binding domain GNE05_20355 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GNE05_20355 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GNE05_20355 PF00111 2Fe-2S iron-sulfur cluster binding domain GNE05_20355 PF01799 [2Fe-2S] binding domain GNE05_20360 PF12804 MobA-like NTP transferase domain GNE05_20365 PF13478 XdhC Rossmann domain GNE05_20365 PF02625 XdhC and CoxI family GNE05_20405 PF02590 Predicted SPOUT methyltransferase GNE05_20410 PF14116 YyzF-like protein GNE05_20425 PF00248 Aldo/keto reductase family GNE05_20430 PF00583 Acetyltransferase (GNAT) family GNE05_20435 PF18801 response regulator aspartate phosphatase H, N terminal GNE05_20440 PF00491 Arginase family GNE05_20445 PF00324 Amino acid permease GNE05_20450 PF00202 Aminotransferase class-III GNE05_20455 PF13630 SdpI/YhfL protein family GNE05_20455 PF07853 Protein of unknown function (DUF1648) GNE05_20460 PF01022 Bacterial regulatory protein, arsR family GNE05_20465 PF13426 PAS domain GNE05_20465 PF02954 Bacterial regulatory protein, Fis family GNE05_20465 PF00158 Sigma-54 interaction domain GNE05_20475 PF12848 ABC transporter GNE05_20475 PF00005 ABC transporter GNE05_20475 PF16326 ABC transporter C-terminal domain GNE05_20490 PF00899 ThiF family GNE05_20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_20495 PF00672 HAMP domain GNE05_20495 PF00512 His Kinase A (phospho-acceptor) domain GNE05_20500 PF00486 Transcriptional regulatory protein, C terminal GNE05_20500 PF00072 Response regulator receiver domain GNE05_20510 PF13180 PDZ domain GNE05_20515 PF00753 Metallo-beta-lactamase superfamily GNE05_20520 PF09648 YycH protein GNE05_20525 PF07435 YycH protein GNE05_20530 PF00512 His Kinase A (phospho-acceptor) domain GNE05_20530 PF13426 PAS domain GNE05_20530 PF00672 HAMP domain GNE05_20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GNE05_20535 PF00486 Transcriptional regulatory protein, C terminal GNE05_20535 PF00072 Response regulator receiver domain GNE05_20560 PF00709 Adenylosuccinate synthetase GNE05_20565 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_20570 PF03796 DnaB-like helicase C terminal domain GNE05_20570 PF00772 DnaB-like helicase N terminal domain GNE05_20575 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) GNE05_20585 PF14174 YycC-like protein GNE05_20590 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase GNE05_20595 PF00534 Glycosyl transferases group 1 GNE05_20595 PF13439 Glycosyltransferase Family 4 GNE05_20605 PF02222 ATP-grasp domain GNE05_20610 PF13439 Glycosyltransferase Family 4 GNE05_20610 PF00534 Glycosyl transferases group 1 GNE05_20625 PF01281 Ribosomal protein L9, N-terminal domain GNE05_20625 PF03948 Ribosomal protein L9, C-terminal domain GNE05_20630 PF01368 DHH family GNE05_20630 PF02272 DHHA1 domain GNE05_20635 PF09991 Predicted membrane protein (DUF2232) GNE05_20645 PF07875 Coat F domain GNE05_20650 PF01638 HxlR-like helix-turn-helix GNE05_20655 PF01368 DHH family GNE05_20655 PF02833 DHHA2 domain GNE05_20660 PF00892 EamA-like transporter family GNE05_20665 PF02435 Levansucrase/Invertase GNE05_20670 PF00251 Glycosyl hydrolases family 32 N-terminal domain GNE05_20670 PF08244 Glycosyl hydrolases family 32 C terminal GNE05_20675 PF07729 FCD domain GNE05_20675 PF00392 Bacterial regulatory proteins, gntR family GNE05_20680 PF05163 DinB family GNE05_20685 PF07690 Major Facilitator Superfamily GNE05_20690 PF00892 EamA-like transporter family GNE05_20700 PF00881 Nitroreductase family GNE05_20705 PF01047 MarR family GNE05_20710 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GNE05_20710 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GNE05_20715 PF01047 MarR family GNE05_20720 PF13673 Acetyltransferase (GNAT) domain GNE05_20730 PF13419 Haloacid dehalogenase-like hydrolase GNE05_20735 PF13344 Haloacid dehalogenase-like hydrolase GNE05_20735 PF00293 NUDIX domain GNE05_20760 PF05922 Peptidase inhibitor I9 GNE05_20760 PF00082 Subtilase family GNE05_20770 PF00155 Aminotransferase class I and II GNE05_20770 PF00392 Bacterial regulatory proteins, gntR family GNE05_20775 PF00892 EamA-like transporter family GNE05_20780 PF03190 Protein of unknown function, DUF255 GNE05_20785 PF02517 CPBP intramembrane metalloprotease GNE05_20790 PF00083 Sugar (and other) transporter GNE05_20795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GNE05_20800 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GNE05_20800 PF00356 Bacterial regulatory proteins, lacI family GNE05_20810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GNE05_20810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GNE05_20815 PF12833 Helix-turn-helix domain GNE05_20815 PF02805 Metal binding domain of Ada GNE05_20820 PF01084 Ribosomal protein S18 GNE05_20825 PF00436 Single-strand binding protein family GNE05_20830 PF01250 Ribosomal protein S6 GNE05_20835 PF06071 Protein of unknown function (DUF933) GNE05_20835 PF01926 50S ribosome-binding GTPase GNE05_20840 PF01568 Molydopterin dinucleotide binding domain GNE05_20840 PF00384 Molybdopterin oxidoreductase GNE05_20840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GNE05_20845 PF06107 Bacterial protein of unknown function (DUF951) GNE05_20860 PF06866 Protein of unknown function (DUF1256) GNE05_20865 PF17762 HTH domain found in ParB protein GNE05_20865 PF02195 ParB-like nuclease domain GNE05_20870 PF13614 AAA domain GNE05_20875 PF17762 HTH domain found in ParB protein GNE05_20875 PF02195 ParB-like nuclease domain GNE05_20880 PF02527 rRNA small subunit methyltransferase G GNE05_20885 PF01134 Glucose inhibited division protein A GNE05_20885 PF13932 GidA associated domain GNE05_20890 PF12631 MnmE helical domain GNE05_20890 PF10396 GTP-binding protein TrmE N-terminus GNE05_20890 PF01926 50S ribosome-binding GTPase GNE05_20895 PF01424 R3H domain GNE05_20895 PF14804 Jag N-terminus GNE05_20900 PF02096 60Kd inner membrane protein GNE05_20905 PF00825 Ribonuclease P GNE05_20910 PF00468 Ribosomal protein L34