locus-tag class description DN399_00005 PF00308 Bacterial dnaA protein DN399_00005 PF08299 Bacterial dnaA protein helix-turn-helix DN399_00005 PF11638 DnaA N-terminal domain DN399_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DN399_00010 PF02767 DNA polymerase III beta subunit, central domain DN399_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DN399_00020 PF02463 RecF/RecN/SMC N terminal domain DN399_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DN399_00025 PF00204 DNA gyrase B DN399_00025 PF01751 Toprim domain DN399_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DN399_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DN399_00060 PF14175 YaaC-like Protein DN399_00065 PF00478 IMP dehydrogenase / GMP reductase domain DN399_00065 PF00571 CBS domain DN399_00070 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_00070 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_00075 PF01680 SOR/SNZ family DN399_00080 PF01174 SNO glutamine amidotransferase family DN399_00085 PF02403 Seryl-tRNA synthetase N-terminal domain DN399_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN399_00100 PF01712 Deoxynucleoside kinase DN399_00105 PF01712 Deoxynucleoside kinase DN399_00110 PF00857 Isochorismatase family DN399_00120 PF14437 MafB19-like deaminase DN399_00130 PF12169 DNA polymerase III subunits gamma and tau domain III DN399_00135 PF02575 YbaB/EbfC DNA-binding family DN399_00140 PF13662 Toprim domain DN399_00140 PF02132 RecR protein DN399_00145 PF10704 Protein of unknown function (DUF2508) DN399_00150 PF07441 SigmaK-factor processing regulatory protein BofA DN399_00185 PF01276 Orn/Lys/Arg decarboxylase, major domain DN399_00185 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN399_00190 PF02223 Thymidylate kinase DN399_00195 PF09115 DNA polymerase III, delta subunit, C terminal DN399_00200 PF04468 PSP1 C-terminal conserved region DN399_00205 PF06156 Initiation control protein YabA DN399_00210 PF05175 Methyltransferase small domain DN399_00215 PF01541 GIY-YIG catalytic domain DN399_00220 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN399_00225 PF18277 AbrB C-terminal domain DN399_00225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN399_00230 PF08264 Anticodon-binding domain of tRNA DN399_00230 PF09334 tRNA synthetases class I (M) DN399_00230 PF01588 Putative tRNA binding domain DN399_00235 PF01026 TatD related DNase DN399_00240 PF13662 Toprim domain DN399_00240 PF13331 Domain of unknown function (DUF4093) DN399_00245 PF00398 Ribosomal RNA adenine dimethylase DN399_00250 PF05582 YabG peptidase U57 DN399_00255 PF06257 Biofilm formation stimulator VEG DN399_00260 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN399_00265 PF08544 GHMP kinases C terminal DN399_00265 PF00288 GHMP kinases N terminal domain DN399_00270 PF00156 Phosphoribosyl transferase domain DN399_00270 PF09182 Bacterial purine repressor, N-terminal DN399_00275 PF01042 Endoribonuclease L-PSP DN399_00280 PF04026 SpoVG DN399_00285 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_00285 PF00483 Nucleotidyl transferase DN399_00290 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN399_00290 PF14572 Phosphoribosyl synthetase-associated domain DN399_00295 PF01195 Peptidyl-tRNA hydrolase DN399_00305 PF17757 UvrB interaction domain DN399_00305 PF03461 TRCF domain DN399_00305 PF00270 DEAD/DEAH box helicase DN399_00305 PF02559 CarD-like/TRCF domain DN399_00305 PF00271 Helicase conserved C-terminal domain DN399_00310 PF15714 Stage V sporulation protein T C-terminal, transcription factor DN399_00310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN399_00315 PF01943 Polysaccharide biosynthesis protein DN399_00315 PF14667 Polysaccharide biosynthesis C-terminal domain DN399_00320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN399_00320 PF03819 MazG nucleotide pyrophosphohydrolase domain DN399_00325 PF01479 S4 domain DN399_00330 PF07873 YabP family DN399_00335 PF09578 Spore cortex protein YabQ (Spore_YabQ) DN399_00345 PF00575 S1 RNA binding domain DN399_00360 PF07228 Stage II sporulation protein E (SpoIIE) DN399_00365 PF01171 PP-loop family DN399_00365 PF09179 TilS substrate binding domain DN399_00365 PF11734 TilS substrate C-terminal domain DN399_00375 PF00004 ATPase family associated with various cellular activities (AAA) DN399_00375 PF06480 FtsH Extracellular DN399_00375 PF01434 Peptidase family M41 DN399_00375 PF17862 AAA+ lid domain DN399_00380 PF03309 Type III pantothenate kinase DN399_00385 PF01430 Hsp33 protein DN399_00390 PF00291 Pyridoxal-phosphate dependent enzyme DN399_00395 PF00425 chorismate binding enzyme DN399_00395 PF04715 Anthranilate synthase component I, N terminal region DN399_00400 PF00117 Glutamine amidotransferase class-I DN399_00405 PF01063 Amino-transferase class IV DN399_00410 PF00809 Pterin binding enzyme DN399_00415 PF02152 Dihydroneopterin aldolase DN399_00420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DN399_00425 PF01381 Helix-turn-helix DN399_00430 PF01207 Dihydrouridine synthase (Dus) DN399_00435 PF00152 tRNA synthetases class II (D, K and N) DN399_00435 PF01336 OB-fold nucleic acid binding domain DN399_00515 PF17727 CtsR C-terminal dimerization domain DN399_00515 PF05848 CtsR N-terminal HTH domain DN399_00520 PF02151 UvrB/uvrC motif DN399_00525 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DN399_00530 PF17871 AAA lid domain DN399_00530 PF00004 ATPase family associated with various cellular activities (AAA) DN399_00530 PF10431 C-terminal, D2-small domain, of ClpB protein DN399_00530 PF07724 AAA domain (Cdc48 subfamily) DN399_00530 PF02861 Clp amino terminal domain, pathogenicity island component DN399_00535 PF18073 Rubredoxin metal binding domain DN399_00540 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN399_00540 PF10635 DisA bacterial checkpoint controller linker region DN399_00550 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN399_00555 PF02542 YgbB family DN399_00560 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN399_00565 PF06426 Serine acetyltransferase, N-terminal DN399_00565 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_00570 PF09190 DALR domain DN399_00570 PF01406 tRNA synthetases class I (C) catalytic domain DN399_00575 PF00636 Ribonuclease III domain DN399_00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN399_00580 PF00588 SpoU rRNA Methylase family DN399_00585 PF05991 YacP-like NYN domain DN399_00590 PF04542 Sigma-70 region 2 DN399_00590 PF08281 Sigma-70, region 4 DN399_00595 PF00471 Ribosomal protein L33 DN399_00600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DN399_00605 PF02357 Transcription termination factor nusG DN399_00605 PF00467 KOW motif DN399_00610 PF03946 Ribosomal protein L11, N-terminal domain DN399_00610 PF00298 Ribosomal protein L11, RNA binding domain DN399_00615 PF00687 Ribosomal protein L1p/L10e family DN399_00620 PF00466 Ribosomal protein L10 DN399_00625 PF00542 Ribosomal protein L7/L12 C-terminal domain DN399_00625 PF16320 Ribosomal protein L7/L12 dimerisation domain DN399_00630 PF05175 Methyltransferase small domain DN399_00635 PF04561 RNA polymerase Rpb2, domain 2 DN399_00635 PF04565 RNA polymerase Rpb2, domain 3 DN399_00635 PF10385 RNA polymerase beta subunit external 1 domain DN399_00635 PF00562 RNA polymerase Rpb2, domain 6 DN399_00635 PF04560 RNA polymerase Rpb2, domain 7 DN399_00635 PF04563 RNA polymerase beta subunit DN399_00640 PF04997 RNA polymerase Rpb1, domain 1 DN399_00640 PF00623 RNA polymerase Rpb1, domain 2 DN399_00640 PF04983 RNA polymerase Rpb1, domain 3 DN399_00640 PF05000 RNA polymerase Rpb1, domain 4 DN399_00640 PF04998 RNA polymerase Rpb1, domain 5 DN399_00645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN399_00650 PF00164 Ribosomal protein S12/S23 DN399_00655 PF00177 Ribosomal protein S7p/S5e DN399_00660 PF00679 Elongation factor G C-terminus DN399_00660 PF14492 Elongation Factor G, domain II DN399_00660 PF03764 Elongation factor G, domain IV DN399_00660 PF03144 Elongation factor Tu domain 2 DN399_00660 PF00009 Elongation factor Tu GTP binding domain DN399_00665 PF00009 Elongation factor Tu GTP binding domain DN399_00665 PF03143 Elongation factor Tu C-terminal domain DN399_00665 PF03144 Elongation factor Tu domain 2 DN399_00675 PF00338 Ribosomal protein S10p/S20e DN399_00680 PF00297 Ribosomal protein L3 DN399_00685 PF00573 Ribosomal protein L4/L1 family DN399_00690 PF00276 Ribosomal protein L23 DN399_00695 PF03947 Ribosomal Proteins L2, C-terminal domain DN399_00695 PF00181 Ribosomal Proteins L2, RNA binding domain DN399_00700 PF00203 Ribosomal protein S19 DN399_00705 PF00237 Ribosomal protein L22p/L17e DN399_00710 PF00189 Ribosomal protein S3, C-terminal domain DN399_00710 PF07650 KH domain DN399_00715 PF00252 Ribosomal protein L16p/L10e DN399_00720 PF00831 Ribosomal L29 protein DN399_00725 PF00366 Ribosomal protein S17 DN399_00730 PF00238 Ribosomal protein L14p/L23e DN399_00735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DN399_00735 PF00467 KOW motif DN399_00740 PF00673 ribosomal L5P family C-terminus DN399_00740 PF00281 Ribosomal protein L5 DN399_00745 PF00253 Ribosomal protein S14p/S29e DN399_00750 PF00410 Ribosomal protein S8 DN399_00755 PF00347 Ribosomal protein L6 DN399_00760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DN399_00765 PF03719 Ribosomal protein S5, C-terminal domain DN399_00765 PF00333 Ribosomal protein S5, N-terminal domain DN399_00770 PF00327 Ribosomal protein L30p/L7e DN399_00775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DN399_00780 PF00344 SecY translocase DN399_00785 PF05191 Adenylate kinase, active site lid DN399_00790 PF00557 Metallopeptidase family M24 DN399_00795 PF01176 Translation initiation factor 1A / IF-1 DN399_00800 PF00444 Ribosomal protein L36 DN399_00805 PF00416 Ribosomal protein S13/S18 DN399_00810 PF00411 Ribosomal protein S11 DN399_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain DN399_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN399_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN399_00820 PF01196 Ribosomal protein L17 DN399_00825 PF00005 ABC transporter DN399_00830 PF00005 ABC transporter DN399_00835 PF02361 Cobalt transport protein DN399_00840 PF01416 tRNA pseudouridine synthase DN399_00845 PF00572 Ribosomal protein L13 DN399_00850 PF00380 Ribosomal protein S9/S16 DN399_00860 PF01520 N-acetylmuramoyl-L-alanine amidase DN399_00865 PF10609 NUBPL iron-transfer P-loop NTPase DN399_00870 PF17898 Spore germination GerD central core domain DN399_00875 PF14089 KinB-signalling pathway activation in sporulation DN399_00880 PF01522 Polysaccharide deacetylase DN399_00950 PF02595 Glycerate kinase family DN399_00955 PF00491 Arginase family DN399_00960 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN399_00965 PF07949 YbbR-like protein DN399_00970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN399_00970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN399_00970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN399_00970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN399_00980 PF01380 SIS domain DN399_00990 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DN399_00990 PF00326 Prolyl oligopeptidase family DN399_01010 PF00528 Binding-protein-dependent transport system inner membrane component DN399_01015 PF00005 ABC transporter DN399_01015 PF09383 NIL domain DN399_01020 PF03180 NLPA lipoprotein DN399_01025 PF00107 Zinc-binding dehydrogenase DN399_01025 PF08240 Alcohol dehydrogenase GroES-like domain DN399_01035 PF01565 FAD binding domain DN399_01040 PF07690 Major Facilitator Superfamily DN399_01050 PF07690 Major Facilitator Superfamily DN399_01065 PF00528 Binding-protein-dependent transport system inner membrane component DN399_01070 PF12911 N-terminal TM domain of oligopeptide transport permease C DN399_01070 PF00528 Binding-protein-dependent transport system inner membrane component DN399_01075 PF00005 ABC transporter DN399_01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_01080 PF00005 ABC transporter DN399_01085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_01095 PF12833 Helix-turn-helix domain DN399_01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_01115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_01120 PF00248 Aldo/keto reductase family DN399_01125 PF03807 NADP oxidoreductase coenzyme F420-dependent DN399_01125 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN399_01130 PF06800 Sugar transport protein DN399_01135 PF00528 Binding-protein-dependent transport system inner membrane component DN399_01145 PF12727 PBP superfamily domain DN399_01145 PF12728 Helix-turn-helix domain DN399_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_01155 PF03466 LysR substrate binding domain DN399_01160 PF00892 EamA-like transporter family DN399_01165 PF14142 YrzO-like protein DN399_01175 PF01553 Acyltransferase DN399_01185 PF00356 Bacterial regulatory proteins, lacI family DN399_01195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_01195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_01210 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DN399_01230 PF00005 ABC transporter DN399_01230 PF16326 ABC transporter C-terminal domain DN399_01230 PF12848 ABC transporter DN399_01245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_01250 PF00528 Binding-protein-dependent transport system inner membrane component DN399_01260 PF00005 ABC transporter DN399_01260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_01265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_01265 PF00005 ABC transporter DN399_01300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_01305 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN399_01315 PF13520 Amino acid permease DN399_01320 PF07690 Major Facilitator Superfamily DN399_01325 PF01820 D-ala D-ala ligase N-terminus DN399_01325 PF07478 D-ala D-ala ligase C-terminus DN399_01330 PF02875 Mur ligase family, glutamate ligase domain DN399_01330 PF01225 Mur ligase family, catalytic domain DN399_01330 PF08245 Mur ligase middle domain DN399_01335 PF00271 Helicase conserved C-terminal domain DN399_01335 PF00270 DEAD/DEAH box helicase DN399_01340 PF03851 UV-endonuclease UvdE DN399_01345 PF01694 Rhomboid family DN399_01350 PF01648 4'-phosphopantetheinyl transferase superfamily DN399_01360 PF00842 Alanine racemase, C-terminal domain DN399_01360 PF01168 Alanine racemase, N-terminal domain DN399_01365 PF01402 Ribbon-helix-helix protein, copG family DN399_01370 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN399_01375 PF16921 Tex protein YqgF-like domain DN399_01375 PF00575 S1 RNA binding domain DN399_01375 PF17674 HHH domain DN399_01375 PF09371 Tex-like protein N-terminal domain DN399_01385 PF17283 SprT-like zinc ribbon domain DN399_01385 PF10263 SprT-like family DN399_01475 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN399_01480 PF00814 Glycoprotease family DN399_01485 PF00583 Acetyltransferase (GNAT) family DN399_01490 PF00814 Glycoprotease family DN399_01495 PF12848 ABC transporter DN399_01495 PF16326 ABC transporter C-terminal domain DN399_01495 PF00005 ABC transporter DN399_01500 PF06971 Putative DNA-binding protein N-terminus DN399_01500 PF02629 CoA binding domain DN399_01510 PF02517 CPBP intramembrane metalloprotease DN399_01515 PF00166 Chaperonin 10 Kd subunit DN399_01520 PF00118 TCP-1/cpn60 chaperonin family DN399_01525 PF02540 NAD synthase DN399_01525 PF00117 Glutamine amidotransferase class-I DN399_01525 PF00958 GMP synthase C terminal domain DN399_01530 PF00860 Permease family DN399_01535 PF00486 Transcriptional regulatory protein, C terminal DN399_01535 PF00072 Response regulator receiver domain DN399_01540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_01540 PF00989 PAS fold DN399_01540 PF00512 His Kinase A (phospho-acceptor) domain DN399_01540 PF16736 Single Cache-like DN399_01570 PF01323 DSBA-like thioredoxin domain DN399_01600 PF02673 Bacitracin resistance protein BacA DN399_01610 PF00005 ABC transporter DN399_01615 PF00512 His Kinase A (phospho-acceptor) domain DN399_01615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_01620 PF00486 Transcriptional regulatory protein, C terminal DN399_01620 PF00072 Response regulator receiver domain DN399_01640 PF14307 Glycosyltransferase WbsX DN399_01640 PF05045 Rhamnan synthesis protein F DN399_01650 PF08241 Methyltransferase domain DN399_01660 PF01370 NAD dependent epimerase/dehydratase family DN399_01670 PF00535 Glycosyl transferase family 2 DN399_01690 PF00892 EamA-like transporter family DN399_01720 PF00731 AIR carboxylase DN399_01725 PF02222 ATP-grasp domain DN399_01725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DN399_01730 PF10397 Adenylosuccinate lyase C-terminus DN399_01730 PF00206 Lyase DN399_01735 PF01259 SAICAR synthetase DN399_01740 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DN399_01750 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DN399_01750 PF02769 AIR synthase related protein, C-terminal domain DN399_01750 PF00586 AIR synthase related protein, N-terminal domain DN399_01755 PF00156 Phosphoribosyl transferase domain DN399_01760 PF02769 AIR synthase related protein, C-terminal domain DN399_01760 PF00586 AIR synthase related protein, N-terminal domain DN399_01765 PF00551 Formyl transferase DN399_01770 PF01808 AICARFT/IMPCHase bienzyme DN399_01770 PF02142 MGS-like domain DN399_01775 PF02844 Phosphoribosylglycinamide synthetase, N domain DN399_01775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN399_01775 PF02843 Phosphoribosylglycinamide synthetase, C domain DN399_01800 PF01884 PcrB family DN399_01805 PF00580 UvrD/REP helicase N-terminal domain DN399_01805 PF13361 UvrD-like helicase C-terminal domain DN399_01810 PF12826 Helix-hairpin-helix motif DN399_01810 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DN399_01810 PF03120 NAD-dependent DNA ligase OB-fold domain DN399_01810 PF01653 NAD-dependent DNA ligase adenylation domain DN399_01810 PF00533 BRCA1 C Terminus (BRCT) domain DN399_01815 PF07537 CamS sex pheromone cAM373 precursor DN399_01820 PF01925 Sulfite exporter TauE/SafE DN399_01825 PF00171 Aldehyde dehydrogenase family DN399_01830 PF00857 Isochorismatase family DN399_01835 PF00005 ABC transporter DN399_01835 PF09383 NIL domain DN399_01840 PF00528 Binding-protein-dependent transport system inner membrane component DN399_01845 PF03180 NLPA lipoprotein DN399_01860 PF17886 HSP20-like domain found in ArsA DN399_01860 PF02374 Anion-transporting ATPase DN399_01865 PF01047 MarR family DN399_01870 PF05360 yiaA/B two helix domain DN399_01875 PF02686 Glu-tRNAGln amidotransferase C subunit DN399_01880 PF01425 Amidase DN399_01885 PF02637 GatB domain DN399_01885 PF02934 GatB/GatE catalytic domain DN399_01890 PF00781 Diacylglycerol kinase catalytic domain DN399_01895 PF13419 Haloacid dehalogenase-like hydrolase DN399_01900 PF00202 Aminotransferase class-III DN399_01905 PF00158 Sigma-54 interaction domain DN399_01910 PF00171 Aldehyde dehydrogenase family DN399_01915 PF00893 Small Multidrug Resistance protein DN399_01925 PF02073 Thermophilic metalloprotease (M29) DN399_01940 PF01773 Na+ dependent nucleoside transporter N-terminus DN399_01940 PF07662 Na+ dependent nucleoside transporter C-terminus DN399_01940 PF07670 Nucleoside recognition DN399_01945 PF13847 Methyltransferase domain DN399_01945 PF01938 TRAM domain DN399_01945 PF05958 tRNA (Uracil-5-)-methyltransferase DN399_01950 PF01207 Dihydrouridine synthase (Dus) DN399_01955 PF07308 Protein of unknown function (DUF1456) DN399_01975 PF13378 Enolase C-terminal domain-like DN399_01975 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN399_01990 PF01546 Peptidase family M20/M25/M40 DN399_01990 PF07687 Peptidase dimerisation domain DN399_02000 PF13192 Thioredoxin domain DN399_02000 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_02005 PF00578 AhpC/TSA family DN399_02010 PF01636 Phosphotransferase enzyme family DN399_02020 PF00596 Class II Aldolase and Adducin N-terminal domain DN399_02025 PF01032 FecCD transport family DN399_02030 PF01032 FecCD transport family DN399_02035 PF01497 Periplasmic binding protein DN399_02060 PF12728 Helix-turn-helix domain DN399_02085 PF00989 PAS fold DN399_02085 PF00512 His Kinase A (phospho-acceptor) domain DN399_02085 PF13188 PAS domain DN399_02085 PF13426 PAS domain DN399_02085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_02105 PF10127 RNA repair pathway DNA polymerase beta family DN399_02110 PF07690 Major Facilitator Superfamily DN399_02115 PF01266 FAD dependent oxidoreductase DN399_02115 PF00355 Rieske [2Fe-2S] domain DN399_02125 PF00528 Binding-protein-dependent transport system inner membrane component DN399_02130 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN399_02135 PF00005 ABC transporter DN399_02140 PF12729 Four helix bundle sensory module for signal transduction DN399_02140 PF00672 HAMP domain DN399_02140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_02145 PF02863 Arginine repressor, C-terminal domain DN399_02145 PF01316 Arginine repressor, DNA binding domain DN399_02155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN399_02155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN399_02160 PF13520 Amino acid permease DN399_02165 PF00696 Amino acid kinase family DN399_02170 PF13545 Crp-like helix-turn-helix domain DN399_02170 PF00027 Cyclic nucleotide-binding domain DN399_02180 PF08031 Berberine and berberine like DN399_02180 PF01565 FAD binding domain DN399_02185 PF16657 Maltogenic Amylase, C-terminal domain DN399_02185 PF00128 Alpha amylase, catalytic domain DN399_02190 PF02378 Phosphotransferase system, EIIC DN399_02190 PF00367 phosphotransferase system, EIIB DN399_02190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN399_02195 PF03372 Endonuclease/Exonuclease/phosphatase family DN399_02200 PF01061 ABC-2 type transporter DN399_02205 PF01131 DNA topoisomerase DN399_02205 PF01751 Toprim domain DN399_02210 PF02110 Hydroxyethylthiazole kinase family DN399_02215 PF02581 Thiamine monophosphate synthase DN399_02220 PF03605 Anaerobic c4-dicarboxylate membrane transporter DN399_02225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_02225 PF00672 HAMP domain DN399_02230 PF00501 AMP-binding enzyme DN399_02230 PF13193 AMP-binding enzyme C-terminal domain DN399_02230 PF00668 Condensation domain DN399_02230 PF00550 Phosphopantetheine attachment site DN399_02230 PF00975 Thioesterase domain DN399_02235 PF01910 Thiamine-binding protein DN399_02240 PF00528 Binding-protein-dependent transport system inner membrane component DN399_02250 PF00005 ABC transporter DN399_02260 PF00041 Fibronectin type III domain DN399_02260 PF00704 Glycosyl hydrolases family 18 DN399_02285 PF00440 Bacterial regulatory proteins, tetR family DN399_02285 PF08360 QacR-like protein, C-terminal region DN399_02300 PF11700 Vacuole effluxer Atg22 like DN399_02315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN399_02315 PF09180 Prolyl-tRNA synthetase, C-terminal DN399_02315 PF03129 Anticodon binding domain DN399_02325 PF00480 ROK family DN399_02330 PF02342 TerD domain DN399_02335 PF02342 TerD domain DN399_02340 PF02342 TerD domain DN399_02345 PF03741 Integral membrane protein TerC family DN399_02350 PF14266 Putative component of 'biosynthetic module' DN399_02355 PF05816 Toxic anion resistance protein (TelA) DN399_02360 PF00690 Cation transporter/ATPase, N-terminus DN399_02360 PF00689 Cation transporting ATPase, C-terminus DN399_02365 PF06569 Protein of unknown function (DUF1128) DN399_02370 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN399_02380 PF03631 Virulence factor BrkB DN399_02390 PF00892 EamA-like transporter family DN399_02400 PF10502 Signal peptidase, peptidase S26 DN399_02410 PF09335 SNARE associated Golgi protein DN399_02425 PF16242 Pyridoxamine 5'-phosphate oxidase like DN399_02430 PF01699 Sodium/calcium exchanger protein DN399_02435 PF14167 YfkD-like protein DN399_02440 PF08756 YfkB-like domain DN399_02440 PF04055 Radical SAM superfamily DN399_02450 PF05681 Fumarate hydratase (Fumerase) DN399_02450 PF05683 Fumarase C-terminus DN399_02455 PF01522 Polysaccharide deacetylase DN399_02460 PF00730 HhH-GPD superfamily base excision DNA repair protein DN399_02465 PF01938 TRAM domain DN399_02465 PF05958 tRNA (Uracil-5-)-methyltransferase DN399_02470 PF01416 tRNA pseudouridine synthase DN399_02480 PF00158 Sigma-54 interaction domain DN399_02480 PF02954 Bacterial regulatory protein, Fis family DN399_02480 PF13426 PAS domain DN399_02490 PF00324 Amino acid permease DN399_02495 PF01546 Peptidase family M20/M25/M40 DN399_02495 PF07687 Peptidase dimerisation domain DN399_02515 PF04960 Glutaminase DN399_02525 PF00367 phosphotransferase system, EIIB DN399_02525 PF02378 Phosphotransferase system, EIIC DN399_02530 PF00144 Beta-lactamase DN399_02545 PF00535 Glycosyl transferase family 2 DN399_02550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN399_02550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN399_02550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN399_02555 PF00551 Formyl transferase DN399_02555 PF01370 NAD dependent epimerase/dehydratase family DN399_02555 PF02911 Formyl transferase, C-terminal domain DN399_02560 PF00535 Glycosyl transferase family 2 DN399_02570 PF02901 Pyruvate formate lyase-like DN399_02570 PF01228 Glycine radical DN399_02575 PF04055 Radical SAM superfamily DN399_02580 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DN399_02580 PF04101 Glycosyltransferase family 28 C-terminal domain DN399_02595 PF01979 Amidohydrolase family DN399_02600 PF01370 NAD dependent epimerase/dehydratase family DN399_02600 PF08338 Domain of unknown function (DUF1731) DN399_02605 PF02631 RecX family DN399_02620 PF08176 Small acid-soluble spore protein K family DN399_02625 PF14043 WVELL protein DN399_02630 PF04307 LexA-binding, inner membrane-associated putative hydrolase DN399_02635 PF14815 NUDIX domain DN399_02635 PF00730 HhH-GPD superfamily base excision DNA repair protein DN399_02645 PF04259 Small, acid-soluble spore protein, gamma-type DN399_02650 PF14182 YgaB-like protein DN399_02655 PF04167 Protein of unknown function (DUF402) DN399_02660 PF00664 ABC transporter transmembrane region DN399_02660 PF00005 ABC transporter DN399_02665 PF06081 Aromatic acid exporter family member 1 DN399_02670 PF04898 Glutamate synthase central domain DN399_02670 PF01493 GXGXG motif DN399_02670 PF00310 Glutamine amidotransferases class-II DN399_02670 PF01645 Conserved region in glutamate synthase DN399_02675 PF00202 Aminotransferase class-III DN399_02680 PF00005 ABC transporter DN399_02695 PF07885 Ion channel DN399_02700 PF00578 AhpC/TSA family DN399_02705 PF01475 Ferric uptake regulator family DN399_02715 PF11023 Zinc-ribbon containing domain DN399_02815 PF01709 Transcriptional regulator DN399_02820 PF00293 NUDIX domain DN399_02820 PF13344 Haloacid dehalogenase-like hydrolase DN399_02825 PF00912 Transglycosylase DN399_02825 PF00905 Penicillin binding protein transpeptidase domain DN399_02830 PF13462 Thioredoxin DN399_02840 PF08331 Domain of unknown function (DUF1730) DN399_02845 PF12671 Putative amidase domain DN399_02850 PF00588 SpoU rRNA Methylase family DN399_02855 PF03707 Bacterial signalling protein N terminal repeat DN399_02855 PF00990 Diguanylate cyclase, GGDEF domain DN399_02855 PF00563 EAL domain DN399_02860 PF08298 PrkA AAA domain DN399_02860 PF06798 PrkA serine protein kinase C-terminal domain DN399_02865 PF04285 Protein of unknown function (DUF444) DN399_02880 PF02028 BCCT, betaine/carnitine/choline family transporter DN399_02885 PF01752 Collagenase DN399_02885 PF08453 Peptidase family M9 N-terminal DN399_02885 PF18496 Collagenase G catalytic helper subdomain DN399_02895 PF01145 SPFH domain / Band 7 family DN399_02895 PF15975 Flotillin DN399_02900 PF00672 HAMP domain DN399_02900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_02900 PF02743 Cache domain DN399_02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_02905 PF00989 PAS fold DN399_02905 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN399_02905 PF17203 Single cache domain 3 DN399_02910 PF12431 Transcriptional regulator DN399_02910 PF00072 Response regulator receiver domain DN399_02915 PF03600 Citrate transporter DN399_02940 PF04309 Glycerol-3-phosphate responsive antiterminator DN399_02945 PF17912 MalK OB fold domain DN399_02945 PF00005 ABC transporter DN399_02950 PF00528 Binding-protein-dependent transport system inner membrane component DN399_02955 PF00528 Binding-protein-dependent transport system inner membrane component DN399_02960 PF13416 Bacterial extracellular solute-binding protein DN399_02965 PF00149 Calcineurin-like phosphoesterase DN399_02970 PF00072 Response regulator receiver domain DN399_02970 PF00486 Transcriptional regulatory protein, C terminal DN399_02975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_02975 PF00672 HAMP domain DN399_02975 PF00512 His Kinase A (phospho-acceptor) domain DN399_02985 PF13529 Peptidase_C39 like family DN399_02990 PF00672 HAMP domain DN399_02990 PF02743 Cache domain DN399_02990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_02995 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN399_02995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_02995 PF00989 PAS fold DN399_02995 PF17203 Single cache domain 3 DN399_03000 PF00072 Response regulator receiver domain DN399_03005 PF03390 2-hydroxycarboxylate transporter family DN399_03010 PF03949 Malic enzyme, NAD binding domain DN399_03010 PF00390 Malic enzyme, N-terminal domain DN399_03020 PF00892 EamA-like transporter family DN399_03025 PF00392 Bacterial regulatory proteins, gntR family DN399_03025 PF00155 Aminotransferase class I and II DN399_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_03035 PF18698 Histidine kinase sensor domain DN399_03035 PF00512 His Kinase A (phospho-acceptor) domain DN399_03035 PF00989 PAS fold DN399_03035 PF00672 HAMP domain DN399_03040 PF00072 Response regulator receiver domain DN399_03040 PF00486 Transcriptional regulatory protein, C terminal DN399_03045 PF13508 Acetyltransferase (GNAT) domain DN399_03045 PF00583 Acetyltransferase (GNAT) family DN399_03050 PF02634 FdhD/NarQ family DN399_03055 PF00384 Molybdopterin oxidoreductase DN399_03055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN399_03055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN399_03055 PF00037 4Fe-4S binding domain DN399_03055 PF01568 Molydopterin dinucleotide binding domain DN399_03060 PF07849 Protein of unknown function (DUF1641) DN399_03070 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN399_03070 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN399_03075 PF13520 Amino acid permease DN399_03085 PF01022 Bacterial regulatory protein, arsR family DN399_03090 PF00403 Heavy-metal-associated domain DN399_03095 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN399_03095 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DN399_03095 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN399_03105 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN399_03105 PF01447 Thermolysin metallopeptidase, catalytic domain DN399_03105 PF03413 Peptidase propeptide and YPEB domain DN399_03105 PF07504 Fungalysin/Thermolysin Propeptide Motif DN399_03125 PF04294 VanW like protein DN399_03130 PF03816 Cell envelope-related transcriptional attenuator domain DN399_03135 PF07662 Na+ dependent nucleoside transporter C-terminus DN399_03135 PF01773 Na+ dependent nucleoside transporter N-terminus DN399_03140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_03145 PF00571 CBS domain DN399_03145 PF03471 Transporter associated domain DN399_03145 PF01595 Cyclin M transmembrane N-terminal domain DN399_03150 PF00206 Lyase DN399_03150 PF10415 Fumarase C C-terminus DN399_03155 PF02652 L-lactate permease DN399_03160 PF01022 Bacterial regulatory protein, arsR family DN399_03165 PF08141 Small acid-soluble spore protein H family DN399_03170 PF00854 POT family DN399_03175 PF01497 Periplasmic binding protein DN399_03180 PF01032 FecCD transport family DN399_03185 PF01032 FecCD transport family DN399_03190 PF00005 ABC transporter DN399_03195 PF08241 Methyltransferase domain DN399_03200 PF00155 Aminotransferase class I and II DN399_03205 PF01370 NAD dependent epimerase/dehydratase family DN399_03210 PF00293 NUDIX domain DN399_03210 PF13344 Haloacid dehalogenase-like hydrolase DN399_03215 PF00092 von Willebrand factor type A domain DN399_03220 PF07728 AAA domain (dynein-related subfamily) DN399_03225 PF13396 Phospholipase_D-nuclease N-terminal DN399_03225 PF13091 PLD-like domain DN399_03235 PF00563 EAL domain DN399_03235 PF03707 Bacterial signalling protein N terminal repeat DN399_03235 PF00990 Diguanylate cyclase, GGDEF domain DN399_03240 PF13520 Amino acid permease DN399_03245 PF00392 Bacterial regulatory proteins, gntR family DN399_03245 PF07702 UTRA domain DN399_03250 PF00367 phosphotransferase system, EIIB DN399_03250 PF02378 Phosphotransferase system, EIIC DN399_03255 PF00128 Alpha amylase, catalytic domain DN399_03255 PF16657 Maltogenic Amylase, C-terminal domain DN399_03270 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_03275 PF01636 Phosphotransferase enzyme family DN399_03280 PF01235 Sodium:alanine symporter family DN399_03290 PF00005 ABC transporter DN399_03295 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN399_03300 PF00528 Binding-protein-dependent transport system inner membrane component DN399_03305 PF00528 Binding-protein-dependent transport system inner membrane component DN399_03310 PF00324 Amino acid permease DN399_03325 PF13280 WYL domain DN399_03325 PF08279 HTH domain DN399_03330 PF01872 RibD C-terminal domain DN399_03335 PF00512 His Kinase A (phospho-acceptor) domain DN399_03335 PF18698 Histidine kinase sensor domain DN399_03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_03335 PF00672 HAMP domain DN399_03335 PF00989 PAS fold DN399_03340 PF00486 Transcriptional regulatory protein, C terminal DN399_03340 PF00072 Response regulator receiver domain DN399_03360 PF00916 Sulfate permease family DN399_03360 PF01740 STAS domain DN399_03365 PF00582 Universal stress protein family DN399_03375 PF07690 Major Facilitator Superfamily DN399_03380 PF01047 MarR family DN399_03385 PF07690 Major Facilitator Superfamily DN399_03390 PF00356 Bacterial regulatory proteins, lacI family DN399_03395 PF00294 pfkB family carbohydrate kinase DN399_03400 PF05025 RbsD / FucU transport protein family DN399_03405 PF00005 ABC transporter DN399_03410 PF02653 Branched-chain amino acid transport system / permease component DN399_03415 PF13407 Periplasmic binding protein domain DN399_03420 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN399_03425 PF05547 Immune inhibitor A peptidase M6 DN399_03440 PF08240 Alcohol dehydrogenase GroES-like domain DN399_03440 PF00107 Zinc-binding dehydrogenase DN399_03450 PF00882 Zinc dependent phospholipase C DN399_03455 PF03372 Endonuclease/Exonuclease/phosphatase family DN399_03485 PF02673 Bacitracin resistance protein BacA DN399_03490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_03490 PF00672 HAMP domain DN399_03490 PF02743 Cache domain DN399_03495 PF07501 G5 domain DN399_03495 PF03990 G5-linked-Ubiquitin-like domain DN399_03495 PF06725 3D domain DN399_03500 PF01381 Helix-turn-helix DN399_03510 PF04203 Sortase domain DN399_03520 PF00854 POT family DN399_03525 PF05525 Branched-chain amino acid transport protein DN399_03540 PF00324 Amino acid permease DN399_03545 PF00860 Permease family DN399_03560 PF13673 Acetyltransferase (GNAT) domain DN399_03570 PF00999 Sodium/hydrogen exchanger family DN399_03570 PF02254 TrkA-N domain DN399_03570 PF02080 TrkA-C domain DN399_03580 PF00510 Cytochrome c oxidase subunit III DN399_03585 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN399_03590 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN399_03595 PF00324 Amino acid permease DN399_03600 PF13529 Peptidase_C39 like family DN399_03605 PF07687 Peptidase dimerisation domain DN399_03605 PF01546 Peptidase family M20/M25/M40 DN399_03610 PF11755 Protein of unknown function (DUF3311) DN399_03615 PF00474 Sodium:solute symporter family DN399_03620 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_03625 PF03845 Spore germination protein DN399_03630 PF05504 Spore germination B3/ GerAC like, C-terminal DN399_03635 PF17910 FeoB cytosolic helical domain DN399_03635 PF07664 Ferrous iron transport protein B C terminus DN399_03635 PF02421 Ferrous iron transport protein B DN399_03635 PF07670 Nucleoside recognition DN399_03640 PF02421 Ferrous iron transport protein B DN399_03640 PF07670 Nucleoside recognition DN399_03640 PF07664 Ferrous iron transport protein B C terminus DN399_03640 PF17910 FeoB cytosolic helical domain DN399_03645 PF07670 Nucleoside recognition DN399_03645 PF02421 Ferrous iron transport protein B DN399_03645 PF17910 FeoB cytosolic helical domain DN399_03645 PF07664 Ferrous iron transport protein B C terminus DN399_03645 PF04023 FeoA domain DN399_03650 PF12849 PBP superfamily domain DN399_03655 PF00528 Binding-protein-dependent transport system inner membrane component DN399_03660 PF00528 Binding-protein-dependent transport system inner membrane component DN399_03670 PF00873 AcrB/AcrD/AcrF family DN399_03790 PF00571 CBS domain DN399_03805 PF08239 Bacterial SH3 domain DN399_03805 PF00246 Zinc carboxypeptidase DN399_03810 PF03070 TENA/THI-4/PQQC family DN399_03815 PF00005 ABC transporter DN399_03820 PF00528 Binding-protein-dependent transport system inner membrane component DN399_03825 PF09084 NMT1/THI5 like DN399_03830 PF02581 Thiamine monophosphate synthase DN399_03835 PF01266 FAD dependent oxidoreductase DN399_03840 PF02597 ThiS family DN399_03845 PF05690 Thiazole biosynthesis protein ThiG DN399_03850 PF00899 ThiF family DN399_03855 PF08543 Phosphomethylpyrimidine kinase DN399_03880 PF03814 Potassium-transporting ATPase A subunit DN399_03890 PF02669 K+-transporting ATPase, c chain DN399_03895 PF02702 Osmosensitive K+ channel His kinase sensor domain DN399_03900 PF07690 Major Facilitator Superfamily DN399_03905 PF01047 MarR family DN399_03915 PF00860 Permease family DN399_03925 PF17969 L,D-transpeptidase C-terminal domain DN399_03925 PF03734 L,D-transpeptidase catalytic domain DN399_03935 PF00294 pfkB family carbohydrate kinase DN399_03940 PF00251 Glycosyl hydrolases family 32 N-terminal domain DN399_03940 PF08244 Glycosyl hydrolases family 32 C terminal DN399_03945 PF02378 Phosphotransferase system, EIIC DN399_03945 PF00367 phosphotransferase system, EIIB DN399_03950 PF13407 Periplasmic binding protein domain DN399_03950 PF00356 Bacterial regulatory proteins, lacI family DN399_03960 PF00085 Thioredoxin DN399_03965 PF02600 Disulfide bond formation protein DsbB DN399_03970 PF14148 YhdB-like protein DN399_03980 PF03845 Spore germination protein DN399_03990 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_04000 PF00881 Nitroreductase family DN399_04005 PF04293 SpoVR like protein DN399_04015 PF00089 Trypsin DN399_04040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN399_04040 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_04045 PF02583 Metal-sensitive transcriptional repressor DN399_04050 PF00581 Rhodanese-like domain DN399_04050 PF01206 Sulfurtransferase TusA DN399_04055 PF00581 Rhodanese-like domain DN399_04055 PF00753 Metallo-beta-lactamase superfamily DN399_04060 PF01206 Sulfurtransferase TusA DN399_04065 PF00581 Rhodanese-like domain DN399_04065 PF01206 Sulfurtransferase TusA DN399_04070 PF00581 Rhodanese-like domain DN399_04075 PF13686 DsrE/DsrF/DrsH-like family DN399_04080 PF01925 Sulfite exporter TauE/SafE DN399_04090 PF03816 Cell envelope-related transcriptional attenuator domain DN399_04095 PF08240 Alcohol dehydrogenase GroES-like domain DN399_04095 PF00107 Zinc-binding dehydrogenase DN399_04100 PF02690 Na+/Pi-cotransporter DN399_04105 PF07690 Major Facilitator Superfamily DN399_04120 PF00874 PRD domain DN399_04120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN399_04120 PF08279 HTH domain DN399_04120 PF05043 Mga helix-turn-helix domain DN399_04125 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN399_04130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN399_04135 PF02378 Phosphotransferase system, EIIC DN399_04155 PF06725 3D domain DN399_04155 PF01476 LysM domain DN399_04160 PF02687 FtsX-like permease family DN399_04160 PF12704 MacB-like periplasmic core domain DN399_04165 PF00005 ABC transporter DN399_04175 PF09529 Integral membrane protein (intg_mem_TP0381) DN399_04190 PF05525 Branched-chain amino acid transport protein DN399_04195 PF05067 Manganese containing catalase DN399_04200 PF12652 CotJB protein DN399_04205 PF11007 Spore coat associated protein JA (CotJA) DN399_04220 PF02735 Ku70/Ku80 beta-barrel domain DN399_04230 PF09335 SNARE associated Golgi protein DN399_04260 PF13520 Amino acid permease DN399_04265 PF00999 Sodium/hydrogen exchanger family DN399_04275 PF01380 SIS domain DN399_04275 PF01418 Helix-turn-helix domain, rpiR family DN399_04280 PF13580 SIS domain DN399_04285 PF02378 Phosphotransferase system, EIIC DN399_04285 PF00367 phosphotransferase system, EIIB DN399_04295 PF07681 DoxX DN399_04310 PF00892 EamA-like transporter family DN399_04315 PF01037 Lrp/AsnC ligand binding domain DN399_04320 PF14698 Argininosuccinate lyase C-terminal DN399_04320 PF00206 Lyase DN399_04320 PF00583 Acetyltransferase (GNAT) family DN399_04325 PF00106 short chain dehydrogenase DN399_04330 PF13411 MerR HTH family regulatory protein DN399_04340 PF00893 Small Multidrug Resistance protein DN399_04350 PF17934 Tetracyclin repressor-like, C-terminal domain DN399_04350 PF00440 Bacterial regulatory proteins, tetR family DN399_04355 PF07690 Major Facilitator Superfamily DN399_04360 PF01638 HxlR-like helix-turn-helix DN399_04370 PF02525 Flavodoxin-like fold DN399_04375 PF12793 Sugar transport-related sRNA regulator N-term DN399_04375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_04380 PF07690 Major Facilitator Superfamily DN399_04400 PF13520 Amino acid permease DN399_04415 PF00171 Aldehyde dehydrogenase family DN399_04430 PF00005 ABC transporter DN399_04430 PF00664 ABC transporter transmembrane region DN399_04435 PF00005 ABC transporter DN399_04435 PF00664 ABC transporter transmembrane region DN399_04445 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN399_04450 PF00528 Binding-protein-dependent transport system inner membrane component DN399_04455 PF00005 ABC transporter DN399_04460 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN399_04470 PF14398 YheC/D like ATP-grasp DN399_04480 PF04286 Protein of unknown function (DUF445) DN399_04485 PF06133 Control of competence regulator ComK, YlbF/YmcA DN399_04500 PF00205 Thiamine pyrophosphate enzyme, central domain DN399_04500 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN399_04500 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN399_04505 PF03306 Alpha-acetolactate decarboxylase DN399_04515 PF02245 Methylpurine-DNA glycosylase (MPG) DN399_04525 PF17961 Bacterial Ig domain DN399_04525 PF17210 SdrD B-like domain DN399_04525 PF00746 LPXTG cell wall anchor motif DN399_04525 PF04650 YSIRK type signal peptide DN399_04525 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DN399_04530 PF01471 Putative peptidoglycan binding domain DN399_04530 PF01510 N-acetylmuramoyl-L-alanine amidase DN399_04535 PF04055 Radical SAM superfamily DN399_04540 PF00501 AMP-binding enzyme DN399_04540 PF13193 AMP-binding enzyme C-terminal domain DN399_04555 PF00916 Sulfate permease family DN399_04555 PF01740 STAS domain DN399_04560 PF01943 Polysaccharide biosynthesis protein DN399_04560 PF14667 Polysaccharide biosynthesis C-terminal domain DN399_04585 PF00378 Enoyl-CoA hydratase/isomerase DN399_04605 PF05343 M42 glutamyl aminopeptidase DN399_04610 PF00395 S-layer homology domain DN399_04610 PF01520 N-acetylmuramoyl-L-alanine amidase DN399_04620 PF11121 Protein of unknown function (DUF2639) DN399_04625 PF05544 Proline racemase DN399_04630 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN399_04635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_04640 PF00528 Binding-protein-dependent transport system inner membrane component DN399_04645 PF12911 N-terminal TM domain of oligopeptide transport permease C DN399_04645 PF00528 Binding-protein-dependent transport system inner membrane component DN399_04650 PF00005 ABC transporter DN399_04650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_04655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_04655 PF00005 ABC transporter DN399_04665 PF00753 Metallo-beta-lactamase superfamily DN399_04665 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN399_04685 PF00083 Sugar (and other) transporter DN399_04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_04690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN399_04695 PF08279 HTH domain DN399_04695 PF00072 Response regulator receiver domain DN399_04695 PF12431 Transcriptional regulator DN399_04700 PF03401 Tripartite tricarboxylate transporter family receptor DN399_04705 PF02342 TerD domain DN399_04735 PF06445 GyrI-like small molecule binding domain DN399_04735 PF13411 MerR HTH family regulatory protein DN399_04750 PF00772 DnaB-like helicase N terminal domain DN399_04750 PF03796 DnaB-like helicase C terminal domain DN399_04760 PF01925 Sulfite exporter TauE/SafE DN399_04775 PF07690 Major Facilitator Superfamily DN399_04785 PF09680 Family of unknown function DN399_04790 PF13302 Acetyltransferase (GNAT) domain DN399_04815 PF13026 Protein of unknown function (DUF3887) DN399_04815 PF12146 Serine aminopeptidase, S33 DN399_04855 PF01066 CDP-alcohol phosphatidyltransferase DN399_04875 PF02733 Dak1 domain DN399_04890 PF02733 Dak1 domain DN399_04930 PF00395 S-layer homology domain DN399_04950 PF12697 Alpha/beta hydrolase family DN399_04990 PF11181 Heat induced stress protein YflT DN399_05010 PF01740 STAS domain DN399_05015 PF13581 Histidine kinase-like ATPase domain DN399_05020 PF04545 Sigma-70, region 4 DN399_05020 PF04539 Sigma-70 region 3 DN399_05020 PF04542 Sigma-70 region 2 DN399_05030 PF07228 Stage II sporulation protein E (SpoIIE) DN399_05030 PF13426 PAS domain DN399_05035 PF03705 CheR methyltransferase, all-alpha domain DN399_05035 PF01739 CheR methyltransferase, SAM binding domain DN399_05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_05040 PF00672 HAMP domain DN399_05040 PF01627 Hpt domain DN399_05040 PF00072 Response regulator receiver domain DN399_05040 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DN399_05040 PF00512 His Kinase A (phospho-acceptor) domain DN399_05060 PF01906 Putative heavy-metal-binding DN399_05070 PF08240 Alcohol dehydrogenase GroES-like domain DN399_05070 PF00107 Zinc-binding dehydrogenase DN399_05075 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DN399_05080 PF11121 Protein of unknown function (DUF2639) DN399_05095 PF00149 Calcineurin-like phosphoesterase DN399_05100 PF13514 AAA domain DN399_05105 PF01966 HD domain DN399_05105 PF01336 OB-fold nucleic acid binding domain DN399_05110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_05115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_05120 PF18801 response regulator aspartate phosphatase H, N terminal DN399_05120 PF17874 MalT-like TPR region DN399_05135 PF08386 TAP-like protein DN399_05135 PF00561 alpha/beta hydrolase fold DN399_05140 PF14147 Sporulation protein YhaL DN399_05150 PF00190 Cupin DN399_05155 PF01381 Helix-turn-helix DN399_05160 PF04309 Glycerol-3-phosphate responsive antiterminator DN399_05165 PF00230 Major intrinsic protein DN399_05170 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN399_05170 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN399_05175 PF01266 FAD dependent oxidoreductase DN399_05175 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DN399_05180 PF03551 Transcriptional regulator PadR-like family DN399_05190 PF08281 Sigma-70, region 4 DN399_05190 PF04542 Sigma-70 region 2 DN399_05210 PF03176 MMPL family DN399_05215 PF13538 UvrD-like helicase C-terminal domain DN399_05245 PF01047 MarR family DN399_05250 PF12732 YtxH-like protein DN399_05255 PF01230 HIT domain DN399_05260 PF00005 ABC transporter DN399_05265 PF05975 Bacterial ABC transporter protein EcsB DN399_05270 PF12787 EcsC protein family DN399_05285 PF03703 Bacterial PH domain DN399_05290 PF03703 Bacterial PH domain DN399_05320 PF10014 2OG-Fe dioxygenase DN399_05330 PF00892 EamA-like transporter family DN399_05335 PF03703 Bacterial PH domain DN399_05340 PF03703 Bacterial PH domain DN399_05345 PF03992 Antibiotic biosynthesis monooxygenase DN399_05350 PF00905 Penicillin binding protein transpeptidase domain DN399_05350 PF00912 Transglycosylase DN399_05355 PF01208 Uroporphyrinogen decarboxylase (URO-D) DN399_05390 PF00440 Bacterial regulatory proteins, tetR family DN399_05390 PF17932 Tetracyclin repressor-like, C-terminal domain DN399_05425 PF13302 Acetyltransferase (GNAT) domain DN399_05430 PF00356 Bacterial regulatory proteins, lacI family DN399_05435 PF14149 YhfH-like protein DN399_05440 PF12706 Beta-lactamase superfamily domain DN399_05445 PF10437 Bacterial lipoate protein ligase C-terminus DN399_05445 PF03099 Biotin/lipoate A/B protein ligase family DN399_05455 PF13193 AMP-binding enzyme C-terminal domain DN399_05455 PF00501 AMP-binding enzyme DN399_05460 PF00395 S-layer homology domain DN399_05460 PF01520 N-acetylmuramoyl-L-alanine amidase DN399_05470 PF00528 Binding-protein-dependent transport system inner membrane component DN399_05475 PF00528 Binding-protein-dependent transport system inner membrane component DN399_05480 PF17850 CysA C-terminal regulatory domain DN399_05480 PF12857 TOBE-like domain DN399_05480 PF00005 ABC transporter DN399_05545 PF07968 Leukocidin/Hemolysin toxin family DN399_05555 PF00149 Calcineurin-like phosphoesterase DN399_05560 PF01966 HD domain DN399_05570 PF08281 Sigma-70, region 4 DN399_05570 PF04542 Sigma-70 region 2 DN399_05575 PF06445 GyrI-like small molecule binding domain DN399_05575 PF12833 Helix-turn-helix domain DN399_05580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_05580 PF00512 His Kinase A (phospho-acceptor) domain DN399_05585 PF00072 Response regulator receiver domain DN399_05585 PF00486 Transcriptional regulatory protein, C terminal DN399_05605 PF01435 Peptidase family M48 DN399_05605 PF16491 CAAX prenyl protease N-terminal, five membrane helices DN399_05610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_05610 PF00672 HAMP domain DN399_05610 PF02743 Cache domain DN399_05615 PF06452 Carbohydrate family 9 binding domain-like DN399_05615 PF00331 Glycosyl hydrolase family 10 DN399_05615 PF02018 Carbohydrate binding domain DN399_05615 PF00395 S-layer homology domain DN399_05625 PF01274 Malate synthase DN399_05630 PF00463 Isocitrate lyase family DN399_05645 PF00313 'Cold-shock' DNA-binding domain DN399_05665 PF09335 SNARE associated Golgi protein DN399_05670 PF10502 Signal peptidase, peptidase S26 DN399_05675 PF13361 UvrD-like helicase C-terminal domain DN399_05675 PF12705 PD-(D/E)XK nuclease superfamily DN399_05680 PF13361 UvrD-like helicase C-terminal domain DN399_05680 PF12705 PD-(D/E)XK nuclease superfamily DN399_05680 PF00580 UvrD/REP helicase N-terminal domain DN399_05690 PF10676 Spore germination protein gerPA/gerPF DN399_05695 PF10970 Spore germination protein GerPE DN399_05705 PF10737 Spore germination protein GerPC DN399_05710 PF10803 Spore germination GerPB DN399_05715 PF10676 Spore germination protein gerPA/gerPF DN399_05720 PF09388 Spo0E like sporulation regulatory protein DN399_05725 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN399_05735 PF00202 Aminotransferase class-III DN399_05740 PF07457 Protein of unknown function (DUF1516) DN399_05750 PF00733 Asparagine synthase DN399_05750 PF13537 Glutamine amidotransferase domain DN399_05760 PF00199 Catalase DN399_05760 PF06628 Catalase-related immune-responsive DN399_05765 PF00909 Ammonium Transporter Family DN399_05770 PF00128 Alpha amylase, catalytic domain DN399_05785 PF04461 Protein of unknown function (DUF520) DN399_05790 PF17783 CvfB-like winged helix domain DN399_05790 PF13509 S1 domain DN399_05805 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_05805 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_05810 PF12758 Protein of unknown function (DUF3813) DN399_05825 PF14168 YjzC-like protein DN399_05830 PF00004 ATPase family associated with various cellular activities (AAA) DN399_05830 PF07724 AAA domain (Cdc48 subfamily) DN399_05830 PF02861 Clp amino terminal domain, pathogenicity island component DN399_05830 PF10431 C-terminal, D2-small domain, of ClpB protein DN399_05830 PF17871 AAA lid domain DN399_05850 PF10815 ComZ DN399_05855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN399_05855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN399_05860 PF00109 Beta-ketoacyl synthase, N-terminal domain DN399_05860 PF02801 Beta-ketoacyl synthase, C-terminal domain DN399_05865 PF10026 Predicted Zn-dependent protease (DUF2268) DN399_05870 PF12227 Protein of unknown function (DUF3603) DN399_05880 PF00579 tRNA synthetases class I (W and Y) DN399_05895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_05900 PF00528 Binding-protein-dependent transport system inner membrane component DN399_05905 PF00528 Binding-protein-dependent transport system inner membrane component DN399_05905 PF12911 N-terminal TM domain of oligopeptide transport permease C DN399_05910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_05910 PF00005 ABC transporter DN399_05915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN399_05915 PF00005 ABC transporter DN399_05920 PF01554 MatE DN399_05925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_05935 PF03960 ArsC family DN399_05940 PF03741 Integral membrane protein TerC family DN399_05945 PF05389 Negative regulator of genetic competence (MecA) DN399_05950 PF13396 Phospholipase_D-nuclease N-terminal DN399_05950 PF13091 PLD-like domain DN399_05960 PF01432 Peptidase family M3 DN399_05960 PF08439 Oligopeptidase F DN399_05970 PF01152 Bacterial-like globin DN399_05975 PF01928 CYTH domain DN399_05985 PF04607 Region found in RelA / SpoT proteins DN399_05990 PF01513 ATP-NAD kinase DN399_05995 PF00849 RNA pseudouridylate synthase DN399_06005 PF00149 Calcineurin-like phosphoesterase DN399_06010 PF01098 Cell cycle protein DN399_06015 PF00535 Glycosyl transferase family 2 DN399_06020 PF08241 Methyltransferase domain DN399_06025 PF05711 Macrocin-O-methyltransferase (TylF) DN399_06035 PF13181 Tetratricopeptide repeat DN399_06035 PF00535 Glycosyl transferase family 2 DN399_06055 PF00483 Nucleotidyl transferase DN399_06060 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DN399_06065 PF16363 GDP-mannose 4,6 dehydratase DN399_06070 PF04321 RmlD substrate binding domain DN399_06090 PF07098 Protein of unknown function (DUF1360) DN399_06110 PF00580 UvrD/REP helicase N-terminal domain DN399_06110 PF13361 UvrD-like helicase C-terminal domain DN399_06115 PF13673 Acetyltransferase (GNAT) domain DN399_06125 PF00756 Putative esterase DN399_06145 PF02368 Bacterial Ig-like domain (group 2) DN399_06150 PF00474 Sodium:solute symporter family DN399_06165 PF00117 Glutamine amidotransferase class-I DN399_06165 PF02885 Glycosyl transferase family, helical bundle domain DN399_06165 PF00591 Glycosyl transferase family, a/b domain DN399_06170 PF00591 Glycosyl transferase family, a/b domain DN399_06170 PF02885 Glycosyl transferase family, helical bundle domain DN399_06175 PF00218 Indole-3-glycerol phosphate synthase DN399_06180 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DN399_06185 PF00291 Pyridoxal-phosphate dependent enzyme DN399_06190 PF00290 Tryptophan synthase alpha chain DN399_06200 PF02652 L-lactate permease DN399_06205 PF10042 Uncharacterized conserved protein (DUF2278) DN399_06230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN399_06230 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_06240 PF00881 Nitroreductase family DN399_06255 PF02817 e3 binding domain DN399_06255 PF00364 Biotin-requiring enzyme DN399_06255 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN399_06260 PF00676 Dehydrogenase E1 component DN399_06260 PF16870 2-oxoglutarate dehydrogenase C-terminal DN399_06260 PF02779 Transketolase, pyrimidine binding domain DN399_06265 PF01381 Helix-turn-helix DN399_06325 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_06325 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_06335 PF12389 Camelysin metallo-endopeptidase DN399_06345 PF12389 Camelysin metallo-endopeptidase DN399_06350 PF01381 Helix-turn-helix DN399_06350 PF08671 Anti-repressor SinI DN399_06360 PF05547 Immune inhibitor A peptidase M6 DN399_06365 PF00171 Aldehyde dehydrogenase family DN399_06370 PF00005 ABC transporter DN399_06370 PF08402 TOBE domain DN399_06375 PF00528 Binding-protein-dependent transport system inner membrane component DN399_06380 PF00528 Binding-protein-dependent transport system inner membrane component DN399_06385 PF13416 Bacterial extracellular solute-binding protein DN399_06390 PF01569 PAP2 superfamily DN399_06395 PF03176 MMPL family DN399_06405 PF00849 RNA pseudouridylate synthase DN399_06405 PF01479 S4 domain DN399_06415 PF00188 Cysteine-rich secretory protein family DN399_06420 PF02754 Cysteine-rich domain DN399_06420 PF13183 4Fe-4S dicluster domain DN399_06425 PF01565 FAD binding domain DN399_06425 PF02913 FAD linked oxidases, C-terminal domain DN399_06430 PF17853 GGDEF-like domain DN399_06430 PF13556 PucR C-terminal helix-turn-helix domain DN399_06430 PF05651 Putative sugar diacid recognition DN399_06440 PF00072 Response regulator receiver domain DN399_06440 PF00486 Transcriptional regulatory protein, C terminal DN399_06445 PF18698 Histidine kinase sensor domain DN399_06445 PF00512 His Kinase A (phospho-acceptor) domain DN399_06445 PF00672 HAMP domain DN399_06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_06445 PF00989 PAS fold DN399_06450 PF00392 Bacterial regulatory proteins, gntR family DN399_06450 PF07729 FCD domain DN399_06455 PF02754 Cysteine-rich domain DN399_06460 PF13183 4Fe-4S dicluster domain DN399_06460 PF02589 LUD domain DN399_06460 PF11870 Domain of unknown function (DUF3390) DN399_06465 PF02589 LUD domain DN399_06470 PF01478 Type IV leader peptidase family DN399_06470 PF06750 Bacterial Peptidase A24 N-terminal domain DN399_06480 PF01226 Formate/nitrite transporter DN399_06485 PF03741 Integral membrane protein TerC family DN399_06490 PF02386 Cation transport protein DN399_06495 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN399_06500 PF01575 MaoC like domain DN399_06525 PF00561 alpha/beta hydrolase fold DN399_06535 PF02386 Cation transport protein DN399_06555 PF00005 ABC transporter DN399_06555 PF08402 TOBE domain DN399_06560 PF00528 Binding-protein-dependent transport system inner membrane component DN399_06565 PF13419 Haloacid dehalogenase-like hydrolase DN399_06570 PF00266 Aminotransferase class-V DN399_06580 PF00455 DeoR C terminal sensor domain DN399_06580 PF08220 DeoR-like helix-turn-helix domain DN399_06590 PF00596 Class II Aldolase and Adducin N-terminal domain DN399_06600 PF04748 Divergent polysaccharide deacetylase DN399_06605 PF09388 Spo0E like sporulation regulatory protein DN399_06610 PF00512 His Kinase A (phospho-acceptor) domain DN399_06610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_06610 PF02743 Cache domain DN399_06615 PF01047 MarR family DN399_06625 PF12867 DinB superfamily DN399_06630 PF13188 PAS domain DN399_06630 PF00512 His Kinase A (phospho-acceptor) domain DN399_06630 PF13426 PAS domain DN399_06630 PF00989 PAS fold DN399_06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_06635 PF06508 Queuosine biosynthesis protein QueC DN399_06640 PF01242 6-pyruvoyl tetrahydropterin synthase DN399_06645 PF04055 Radical SAM superfamily DN399_06650 PF14489 QueF-like protein DN399_06655 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DN399_06685 PF07972 NrdI Flavodoxin like DN399_06690 PF08343 Ribonucleotide reductase N-terminal DN399_06690 PF00317 Ribonucleotide reductase, all-alpha domain DN399_06690 PF02867 Ribonucleotide reductase, barrel domain DN399_06695 PF00268 Ribonucleotide reductase, small chain DN399_06700 PF00392 Bacterial regulatory proteins, gntR family DN399_06705 PF00005 ABC transporter DN399_06715 PF00005 ABC transporter DN399_06735 PF01037 Lrp/AsnC ligand binding domain DN399_06745 PF00857 Isochorismatase family DN399_06755 PF17676 LD-carboxypeptidase C-terminal domain DN399_06755 PF02016 LD-carboxypeptidase N-terminal domain DN399_06760 PF03060 Nitronate monooxygenase DN399_06765 PF04914 DltD protein DN399_06770 PF00550 Phosphopantetheine attachment site DN399_06775 PF03062 MBOAT, membrane-bound O-acyltransferase family DN399_06780 PF13193 AMP-binding enzyme C-terminal domain DN399_06780 PF00501 AMP-binding enzyme DN399_06790 PF01546 Peptidase family M20/M25/M40 DN399_06790 PF07687 Peptidase dimerisation domain DN399_06795 PF00258 Flavodoxin DN399_06820 PF01554 MatE DN399_06825 PF02673 Bacitracin resistance protein BacA DN399_06840 PF01047 MarR family DN399_06850 PF00375 Sodium:dicarboxylate symporter family DN399_06855 PF02386 Cation transport protein DN399_06865 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN399_06875 PF03698 Uncharacterised protein family (UPF0180) DN399_06885 PF01063 Amino-transferase class IV DN399_06890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN399_06890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN399_06890 PF00205 Thiamine pyrophosphate enzyme, central domain DN399_06895 PF01842 ACT domain DN399_06895 PF10369 Small subunit of acetolactate synthase DN399_06900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN399_06900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN399_06905 PF08502 LeuA allosteric (dimerisation) domain DN399_06905 PF00682 HMGL-like DN399_06910 PF00180 Isocitrate/isopropylmalate dehydrogenase DN399_06915 PF00330 Aconitase family (aconitate hydratase) DN399_06920 PF00694 Aconitase C-terminal domain DN399_06925 PF13393 Histidyl-tRNA synthetase DN399_06930 PF01634 ATP phosphoribosyltransferase DN399_06935 PF00815 Histidinol dehydrogenase DN399_06940 PF00475 Imidazoleglycerol-phosphate dehydratase DN399_06945 PF00117 Glutamine amidotransferase class-I DN399_06950 PF00977 Histidine biosynthesis protein DN399_06955 PF00977 Histidine biosynthesis protein DN399_06960 PF01502 Phosphoribosyl-AMP cyclohydrolase DN399_06965 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DN399_06970 PF02811 PHP domain DN399_06980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN399_06980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN399_06985 PF01066 CDP-alcohol phosphatidyltransferase DN399_06990 PF00884 Sulfatase DN399_07000 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN399_07000 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN399_07010 PF01507 Phosphoadenosine phosphosulfate reductase family DN399_07015 PF14306 PUA-like domain DN399_07015 PF01747 ATP-sulfurylase DN399_07025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN399_07025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN399_07035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN399_07040 PF01903 CbiX DN399_07050 PF00209 Sodium:neurotransmitter symporter family DN399_07060 PF00375 Sodium:dicarboxylate symporter family DN399_07070 PF03553 Na+/H+ antiporter family DN399_07085 PF09922 Cell wall-active antibiotics response 4TMS YvqF DN399_07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_07090 PF07730 Histidine kinase DN399_07090 PF00672 HAMP domain DN399_07095 PF00196 Bacterial regulatory proteins, luxR family DN399_07095 PF00072 Response regulator receiver domain DN399_07105 PF05525 Branched-chain amino acid transport protein DN399_07115 PF01209 ubiE/COQ5 methyltransferase family DN399_07140 PF00042 Globin DN399_07140 PF00970 Oxidoreductase FAD-binding domain DN399_07140 PF00175 Oxidoreductase NAD-binding domain DN399_07155 PF01925 Sulfite exporter TauE/SafE DN399_07160 PF01384 Phosphate transporter family DN399_07165 PF01865 Protein of unknown function DUF47 DN399_07170 PF00912 Transglycosylase DN399_07170 PF00905 Penicillin binding protein transpeptidase domain DN399_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_07185 PF00989 PAS fold DN399_07185 PF00512 His Kinase A (phospho-acceptor) domain DN399_07190 PF01904 Protein of unknown function DUF72 DN399_07200 PF00589 Phage integrase family DN399_07205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_07205 PF16736 Single Cache-like DN399_07205 PF00989 PAS fold DN399_07205 PF00512 His Kinase A (phospho-acceptor) domain DN399_07215 PF01048 Phosphorylase superfamily DN399_07225 PF03706 Lysylphosphatidylglycerol synthase TM region DN399_07225 PF09924 Uncharacterised conserved protein (DUF2156) DN399_07240 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN399_07240 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN399_07245 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_07245 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_07250 PF07670 Nucleoside recognition DN399_07255 PF07670 Nucleoside recognition DN399_07260 PF01479 S4 domain DN399_07260 PF00849 RNA pseudouridylate synthase DN399_07265 PF00578 AhpC/TSA family DN399_07270 PF05140 ResB-like family DN399_07275 PF01578 Cytochrome C assembly protein DN399_07280 PF00072 Response regulator receiver domain DN399_07280 PF00486 Transcriptional regulatory protein, C terminal DN399_07285 PF00989 PAS fold DN399_07285 PF00512 His Kinase A (phospho-acceptor) domain DN399_07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_07285 PF18698 Histidine kinase sensor domain DN399_07285 PF00672 HAMP domain DN399_07290 PF01923 Cobalamin adenosyltransferase DN399_07305 PF12822 ECF transporter, substrate-specific component DN399_07320 PF00271 Helicase conserved C-terminal domain DN399_07320 PF00270 DEAD/DEAH box helicase DN399_07325 PF02517 CPBP intramembrane metalloprotease DN399_07335 PF00149 Calcineurin-like phosphoesterase DN399_07340 PF13411 MerR HTH family regulatory protein DN399_07345 PF05389 Negative regulator of genetic competence (MecA) DN399_07350 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN399_07350 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN399_07375 PF00710 Asparaginase, N-terminal DN399_07375 PF17763 Glutaminase/Asparaginase C-terminal domain DN399_07380 PF02224 Cytidylate kinase DN399_07385 PF00575 S1 RNA binding domain DN399_07390 PF01070 FMN-dependent dehydrogenase DN399_07395 PF14140 YpzI-like protein DN399_07405 PF14045 YIEGIA protein DN399_07415 PF01926 50S ribosome-binding GTPase DN399_07415 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DN399_07420 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DN399_07420 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DN399_07430 PF10966 Protein of unknown function (DUF2768) DN399_07440 PF09547 Stage IV sporulation protein A (spore_IV_A) DN399_07445 PF00216 Bacterial DNA-binding protein DN399_07450 PF01227 GTP cyclohydrolase I DN399_07455 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DN399_07460 PF01209 ubiE/COQ5 methyltransferase family DN399_07465 PF00348 Polyprenyl synthetase DN399_07470 PF00334 Nucleoside diphosphate kinase DN399_07475 PF01264 Chorismate synthase DN399_07480 PF01761 3-dehydroquinate synthase DN399_07485 PF00155 Aminotransferase class I and II DN399_07495 PF08864 UPF0302 domain DN399_07495 PF08858 IDEAL domain DN399_07500 PF10673 Protein of unknown function (DUF2487) DN399_07505 PF00355 Rieske [2Fe-2S] domain DN399_07510 PF00033 Cytochrome b/b6/petB DN399_07515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN399_07515 PF00032 Cytochrome b(C-terminal)/b6/petD DN399_07520 PF07187 Protein of unknown function (DUF1405) DN399_07530 PF09577 Sporulation protein YpjB (SpoYpjB) DN399_07535 PF04298 Putative neutral zinc metallopeptidase DN399_07545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_07545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_07555 PF03819 MazG nucleotide pyrophosphohydrolase domain DN399_07560 PF01113 Dihydrodipicolinate reductase, N-terminus DN399_07560 PF05173 Dihydrodipicolinate reductase, C-terminus DN399_07565 PF02142 MGS-like domain DN399_07570 PF02585 GlcNAc-PI de-N-acetylase DN399_07575 PF00534 Glycosyl transferases group 1 DN399_07575 PF13439 Glycosyltransferase Family 4 DN399_07580 PF12627 Probable RNA and SrmB- binding site of polymerase A DN399_07580 PF13735 tRNA nucleotidyltransferase domain 2 putative DN399_07580 PF01743 Poly A polymerase head domain DN399_07585 PF02237 Biotin protein ligase C terminal domain DN399_07585 PF03099 Biotin/lipoate A/B protein ligase family DN399_07585 PF08279 HTH domain DN399_07595 PF02548 Ketopantoate hydroxymethyltransferase DN399_07600 PF02569 Pantoate-beta-alanine ligase DN399_07605 PF02261 Aspartate decarboxylase DN399_07610 PF13307 Helicase C-terminal domain DN399_07610 PF04851 Type III restriction enzyme, res subunit DN399_07610 PF00929 Exonuclease DN399_07615 PF14084 Protein of unknown function (DUF4264) DN399_07625 PF00155 Aminotransferase class I and II DN399_07630 PF07261 Replication initiation and membrane attachment DN399_07635 PF00730 HhH-GPD superfamily base excision DNA repair protein DN399_07635 PF10576 Iron-sulfur binding domain of endonuclease III DN399_07635 PF00633 Helix-hairpin-helix motif DN399_07645 PF00905 Penicillin binding protein transpeptidase domain DN399_07645 PF00912 Transglycosylase DN399_07650 PF03838 Recombination protein U DN399_07655 PF10720 Protein of unknown function (DUF2515) DN399_07685 PF06908 YspA SLOG family DN399_07690 PF05103 DivIVA protein DN399_07700 PF01170 Putative RNA methylase family UPF0020 DN399_07700 PF02926 THUMP domain DN399_07710 PF13307 Helicase C-terminal domain DN399_07715 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DN399_07725 PF00557 Metallopeptidase family M24 DN399_07730 PF00156 Phosphoribosyl transferase domain DN399_07735 PF00860 Permease family DN399_07740 PF04235 Protein of unknown function (DUF418) DN399_07745 PF00350 Dynamin family DN399_07755 PF00583 Acetyltransferase (GNAT) family DN399_07760 PF10752 Protein of unknown function (DUF2533) DN399_07765 PF00581 Rhodanese-like domain DN399_07790 PF03738 Glutathionylspermidine synthase preATP-grasp DN399_07805 PF00690 Cation transporter/ATPase, N-terminus DN399_07805 PF00689 Cation transporting ATPase, C-terminus DN399_07810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN399_07810 PF01367 5'-3' exonuclease, C-terminal SAM fold DN399_07825 PF13807 G-rich domain on putative tyrosine kinase DN399_07825 PF02706 Chain length determinant protein DN399_07835 PF02397 Bacterial sugar transferase DN399_07850 PF00535 Glycosyl transferase family 2 DN399_07855 PF13439 Glycosyltransferase Family 4 DN399_07855 PF00534 Glycosyl transferases group 1 DN399_07870 PF13673 Acetyltransferase (GNAT) domain DN399_07870 PF18014 Acetyltransferase (GNAT) domain DN399_07890 PF13456 Reverse transcriptase-like DN399_07895 PF01263 Aldose 1-epimerase DN399_07920 PF00313 'Cold-shock' DNA-binding domain DN399_07925 PF08892 YqcI/YcgG family DN399_07930 PF01810 LysE type translocator DN399_07950 PF00474 Sodium:solute symporter family DN399_07955 PF00202 Aminotransferase class-III DN399_07965 PF00999 Sodium/hydrogen exchanger family DN399_07970 PF17770 Ribonuclease J C-terminal domain DN399_07970 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN399_07970 PF00753 Metallo-beta-lactamase superfamily DN399_07975 PF13411 MerR HTH family regulatory protein DN399_07975 PF06445 GyrI-like small molecule binding domain DN399_07985 PF04239 Protein of unknown function (DUF421) DN399_07990 PF02698 DUF218 domain DN399_08000 PF00881 Nitroreductase family DN399_08025 PF17209 Hfq protein DN399_08035 PF01618 MotA/TolQ/ExbB proton channel family DN399_08040 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN399_08040 PF00691 OmpA family DN399_08045 PF00072 Response regulator receiver domain DN399_08050 PF01627 Hpt domain DN399_08050 PF07194 P2 response regulator binding domain DN399_08050 PF01584 CheW-like domain DN399_08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_08050 PF02895 Signal transducing histidine kinase, homodimeric domain DN399_08055 PF04509 CheC-like family DN399_08055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN399_08070 PF03705 CheR methyltransferase, all-alpha domain DN399_08070 PF01739 CheR methyltransferase, SAM binding domain DN399_08090 PF00460 Flagella basal body rod protein DN399_08090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN399_08095 PF00700 Bacterial flagellin C-terminal helical region DN399_08095 PF00669 Bacterial flagellin N-terminal helical region DN399_08115 PF00460 Flagella basal body rod protein DN399_08120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN399_08120 PF00460 Flagella basal body rod protein DN399_08125 PF02049 Flagellar hook-basal body complex protein FliE DN399_08130 PF01514 Secretory protein of YscJ/FliF family DN399_08130 PF08345 Flagellar M-ring protein C-terminal DN399_08135 PF14841 FliG middle domain DN399_08135 PF01706 FliG C-terminal domain DN399_08135 PF14842 FliG N-terminal domain DN399_08145 PF18269 T3SS EscN ATPase C-terminal domain DN399_08145 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN399_08145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN399_08165 PF07559 Flagellar basal body protein FlaE DN399_08165 PF00460 Flagella basal body rod protein DN399_08165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN399_08180 PF01584 CheW-like domain DN399_08180 PF00072 Response regulator receiver domain DN399_08185 PF12181 DNA binding domain of the motility gene repressor (MogR) DN399_08190 PF00700 Bacterial flagellin C-terminal helical region DN399_08190 PF00669 Bacterial flagellin N-terminal helical region DN399_08195 PF00700 Bacterial flagellin C-terminal helical region DN399_08195 PF00669 Bacterial flagellin N-terminal helical region DN399_08200 PF01464 Transglycosylase SLT domain DN399_08210 PF02154 Flagellar motor switch protein FliM DN399_08210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN399_08215 PF04509 CheC-like family DN399_08215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN399_08225 PF00813 FliP family DN399_08230 PF01313 Bacterial export proteins, family 3 DN399_08240 PF01312 FlhB HrpN YscU SpaS Family DN399_08245 PF00771 FHIPEP family DN399_08250 PF00448 SRP54-type protein, GTPase domain DN399_08255 PF00460 Flagella basal body rod protein DN399_08255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN399_08260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN399_08260 PF02272 DHHA1 domain DN399_08260 PF01411 tRNA synthetases class II (A) DN399_08295 PF03992 Antibiotic biosynthesis monooxygenase DN399_08300 PF08141 Small acid-soluble spore protein H family DN399_08325 PF08402 TOBE domain DN399_08325 PF00005 ABC transporter DN399_08335 PF00528 Binding-protein-dependent transport system inner membrane component DN399_08340 PF12706 Beta-lactamase superfamily domain DN399_08340 PF00753 Metallo-beta-lactamase superfamily DN399_08350 PF10787 Uncharacterised protein from bacillus cereus group DN399_08370 PF00300 Histidine phosphatase superfamily (branch 1) DN399_08380 PF00561 alpha/beta hydrolase fold DN399_08390 PF01047 MarR family DN399_08400 PF00733 Asparagine synthase DN399_08400 PF13537 Glutamine amidotransferase domain DN399_08420 PF01545 Cation efflux family DN399_08420 PF16916 Dimerisation domain of Zinc Transporter DN399_08430 PF00392 Bacterial regulatory proteins, gntR family DN399_08430 PF07729 FCD domain DN399_08435 PF00892 EamA-like transporter family DN399_08445 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN399_08445 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN399_08455 PF03773 Predicted permease DN399_08470 PF03553 Na+/H+ antiporter family DN399_08475 PF13411 MerR HTH family regulatory protein DN399_08485 PF10415 Fumarase C C-terminus DN399_08485 PF00206 Lyase DN399_08500 PF01554 MatE DN399_08505 PF03575 Peptidase family S51 DN399_08525 PF02683 Cytochrome C biogenesis protein transmembrane region DN399_08530 PF00578 AhpC/TSA family DN399_08545 PF00291 Pyridoxal-phosphate dependent enzyme DN399_08550 PF04286 Protein of unknown function (DUF445) DN399_08580 PF00196 Bacterial regulatory proteins, luxR family DN399_08580 PF00072 Response regulator receiver domain DN399_08585 PF13185 GAF domain DN399_08585 PF13492 GAF domain DN399_08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_08585 PF07730 Histidine kinase DN399_08590 PF00005 ABC transporter DN399_08610 PF13091 PLD-like domain DN399_08615 PF00696 Amino acid kinase family DN399_08620 PF00375 Sodium:dicarboxylate symporter family DN399_08625 PF10415 Fumarase C C-terminus DN399_08625 PF00206 Lyase DN399_08630 PF03949 Malic enzyme, NAD binding domain DN399_08630 PF00390 Malic enzyme, N-terminal domain DN399_08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_08640 PF00072 Response regulator receiver domain DN399_08640 PF08664 YcbB domain DN399_08645 PF00176 SNF2 family N-terminal domain DN399_08645 PF00271 Helicase conserved C-terminal domain DN399_08645 PF04434 SWIM zinc finger DN399_08660 PF03590 Aspartate-ammonia ligase DN399_08670 PF00696 Amino acid kinase family DN399_08670 PF13840 ACT domain DN399_08685 PF13761 Domain of unknown function (DUF4166) DN399_08690 PF14158 YndJ-like protein DN399_08695 PF00293 NUDIX domain DN399_08695 PF09297 NADH pyrophosphatase zinc ribbon domain DN399_08700 PF07690 Major Facilitator Superfamily DN399_08710 PF03976 Polyphosphate kinase 2 (PPK2) DN399_08715 PF10400 Virulence activator alpha C-term DN399_08715 PF03551 Transcriptional regulator PadR-like family DN399_08720 PF07690 Major Facilitator Superfamily DN399_08730 PF07690 Major Facilitator Superfamily DN399_08735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN399_08735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN399_08740 PF01926 50S ribosome-binding GTPase DN399_08740 PF13167 GTP-binding GTPase N-terminal DN399_08740 PF16360 GTP-binding GTPase Middle Region DN399_08745 PF07690 Major Facilitator Superfamily DN399_08750 PF00291 Pyridoxal-phosphate dependent enzyme DN399_08770 PF00209 Sodium:neurotransmitter symporter family DN399_08775 PF03422 Carbohydrate binding module (family 6) DN399_08775 PF01522 Polysaccharide deacetylase DN399_08775 PF00457 Glycosyl hydrolases family 11 DN399_08785 PF04239 Protein of unknown function (DUF421) DN399_08800 PF01625 Peptide methionine sulfoxide reductase DN399_08810 PF01063 Amino-transferase class IV DN399_08815 PF00205 Thiamine pyrophosphate enzyme, central domain DN399_08815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN399_08815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN399_08825 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN399_08825 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN399_08830 PF00920 Dehydratase family DN399_08835 PF00585 C-terminal regulatory domain of Threonine dehydratase DN399_08835 PF00291 Pyridoxal-phosphate dependent enzyme DN399_08845 PF09587 Bacterial capsule synthesis protein PGA_cap DN399_08860 PF07690 Major Facilitator Superfamily DN399_08865 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN399_08875 PF00072 Response regulator receiver domain DN399_08875 PF04397 LytTr DNA-binding domain DN399_08880 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DN399_08880 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DN399_08885 PF13673 Acetyltransferase (GNAT) domain DN399_08895 PF01979 Amidohydrolase family DN399_08900 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_08905 PF13302 Acetyltransferase (GNAT) domain DN399_08910 PF00072 Response regulator receiver domain DN399_08910 PF00486 Transcriptional regulatory protein, C terminal DN399_08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_08915 PF00512 His Kinase A (phospho-acceptor) domain DN399_08925 PF01566 Natural resistance-associated macrophage protein DN399_08940 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN399_08940 PF02558 Ketopantoate reductase PanE/ApbA DN399_08945 PF13520 Amino acid permease DN399_08955 PF05791 Bacillus haemolytic enterotoxin (HBL) DN399_08960 PF05791 Bacillus haemolytic enterotoxin (HBL) DN399_08970 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase DN399_08970 PF13088 BNR repeat-like domain DN399_08970 PF00754 F5/8 type C domain DN399_08975 PF02073 Thermophilic metalloprotease (M29) DN399_08990 PF00583 Acetyltransferase (GNAT) family DN399_09000 PF01906 Putative heavy-metal-binding DN399_09010 PF00440 Bacterial regulatory proteins, tetR family DN399_09015 PF04198 Putative sugar-binding domain DN399_09020 PF01791 DeoC/LacD family aldolase DN399_09025 PF07662 Na+ dependent nucleoside transporter C-terminus DN399_09025 PF01773 Na+ dependent nucleoside transporter N-terminus DN399_09030 PF00591 Glycosyl transferase family, a/b domain DN399_09030 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN399_09030 PF02885 Glycosyl transferase family, helical bundle domain DN399_09035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN399_09065 PF07301 Protein of unknown function (DUF1453) DN399_09070 PF05979 Bacterial protein of unknown function (DUF896) DN399_09085 PF03466 LysR substrate binding domain DN399_09085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_09100 PF00557 Metallopeptidase family M24 DN399_09100 PF05195 Aminopeptidase P, N-terminal domain DN399_09110 PF07732 Multicopper oxidase DN399_09110 PF07731 Multicopper oxidase DN399_09110 PF00394 Multicopper oxidase DN399_09115 PF01551 Peptidase family M23 DN399_09150 PF02525 Flavodoxin-like fold DN399_09155 PF05525 Branched-chain amino acid transport protein DN399_09165 PF13115 YtkA-like DN399_09165 PF05425 Copper resistance protein D DN399_09165 PF04234 CopC domain DN399_09170 PF07987 Domain of unkown function (DUF1775) DN399_09175 PF00892 EamA-like transporter family DN399_09180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_09180 PF03466 LysR substrate binding domain DN399_09185 PF02082 Transcriptional regulator DN399_09190 PF01323 DSBA-like thioredoxin domain DN399_09195 PF00881 Nitroreductase family DN399_09200 PF01425 Amidase DN399_09205 PF01594 AI-2E family transporter DN399_09210 PF00056 lactate/malate dehydrogenase, NAD binding domain DN399_09210 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN399_09215 PF01593 Flavin containing amine oxidoreductase DN399_09225 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN399_09225 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN399_09235 PF00005 ABC transporter DN399_09235 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN399_09240 PF00005 ABC transporter DN399_09245 PF02653 Branched-chain amino acid transport system / permease component DN399_09255 PF03466 LysR substrate binding domain DN399_09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_09265 PF14552 Tautomerase enzyme DN399_09270 PF01047 MarR family DN399_09280 PF01654 Cytochrome bd terminal oxidase subunit I DN399_09285 PF02322 Cytochrome bd terminal oxidase subunit II DN399_09290 PF00005 ABC transporter DN399_09290 PF00664 ABC transporter transmembrane region DN399_09295 PF00005 ABC transporter DN399_09295 PF00664 ABC transporter transmembrane region DN399_09305 PF00535 Glycosyl transferase family 2 DN399_09310 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN399_09315 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_09340 PF17676 LD-carboxypeptidase C-terminal domain DN399_09340 PF02016 LD-carboxypeptidase N-terminal domain DN399_09345 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_09345 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_09360 PF01476 LysM domain DN399_09360 PF00877 NlpC/P60 family DN399_09370 PF00664 ABC transporter transmembrane region DN399_09370 PF00005 ABC transporter DN399_09375 PF00486 Transcriptional regulatory protein, C terminal DN399_09375 PF00072 Response regulator receiver domain DN399_09380 PF16736 Single Cache-like DN399_09380 PF00989 PAS fold DN399_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_09380 PF00512 His Kinase A (phospho-acceptor) domain DN399_09385 PF00106 short chain dehydrogenase DN399_09390 PF04439 Streptomycin adenylyltransferase DN399_09395 PF01522 Polysaccharide deacetylase DN399_09395 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DN399_09415 PF00742 Homoserine dehydrogenase DN399_09415 PF01842 ACT domain DN399_09415 PF03447 Homoserine dehydrogenase, NAD binding domain DN399_09420 PF00291 Pyridoxal-phosphate dependent enzyme DN399_09425 PF08544 GHMP kinases C terminal DN399_09425 PF00288 GHMP kinases N terminal domain DN399_09440 PF03816 Cell envelope-related transcriptional attenuator domain DN399_09450 PF00486 Transcriptional regulatory protein, C terminal DN399_09450 PF00072 Response regulator receiver domain DN399_09455 PF00989 PAS fold DN399_09455 PF16736 Single Cache-like DN399_09455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_09455 PF00512 His Kinase A (phospho-acceptor) domain DN399_09460 PF01522 Polysaccharide deacetylase DN399_09470 PF02308 MgtC family DN399_09475 PF00583 Acetyltransferase (GNAT) family DN399_09480 PF04183 IucA / IucC family DN399_09480 PF06276 Ferric iron reductase FhuF-like transporter DN399_09485 PF06276 Ferric iron reductase FhuF-like transporter DN399_09485 PF04183 IucA / IucC family DN399_09490 PF13193 AMP-binding enzyme C-terminal domain DN399_09490 PF00501 AMP-binding enzyme DN399_09505 PF01261 Xylose isomerase-like TIM barrel DN399_09510 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN399_09515 PF07690 Major Facilitator Superfamily DN399_09520 PF01810 LysE type translocator DN399_09525 PF00392 Bacterial regulatory proteins, gntR family DN399_09525 PF00155 Aminotransferase class I and II DN399_09535 PF01734 Patatin-like phospholipase DN399_09560 PF13344 Haloacid dehalogenase-like hydrolase DN399_09560 PF00293 NUDIX domain DN399_09565 PF02540 NAD synthase DN399_09570 PF02687 FtsX-like permease family DN399_09575 PF18277 AbrB C-terminal domain DN399_09575 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN399_09580 PF00082 Subtilase family DN399_09595 PF05656 Protein of unknown function (DUF805) DN399_09615 PF03193 RsgA GTPase DN399_09620 PF02743 Cache domain DN399_09620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_09620 PF00672 HAMP domain DN399_09640 PF00210 Ferritin-like domain DN399_09655 PF00296 Luciferase-like monooxygenase DN399_09665 PF01593 Flavin containing amine oxidoreductase DN399_09670 PF13302 Acetyltransferase (GNAT) domain DN399_09675 PF00248 Aldo/keto reductase family DN399_09685 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN399_09685 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN399_09690 PF00583 Acetyltransferase (GNAT) family DN399_09695 PF01297 Zinc-uptake complex component A periplasmic DN399_09700 PF13460 NAD(P)H-binding DN399_09705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN399_09710 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN399_09710 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN399_09720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_09725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_09735 PF00300 Histidine phosphatase superfamily (branch 1) DN399_09745 PF08757 CotH kinase protein DN399_09750 PF00293 NUDIX domain DN399_09755 PF09335 SNARE associated Golgi protein DN399_09760 PF14667 Polysaccharide biosynthesis C-terminal domain DN399_09760 PF01943 Polysaccharide biosynthesis protein DN399_09770 PF03773 Predicted permease DN399_09775 PF09323 Domain of unknown function (DUF1980) DN399_09780 PF03061 Thioesterase superfamily DN399_09790 PF13396 Phospholipase_D-nuclease N-terminal DN399_09790 PF13091 PLD-like domain DN399_09805 PF13460 NAD(P)H-binding DN399_09810 PF04306 Protein of unknown function (DUF456) DN399_09815 PF00571 CBS domain DN399_09815 PF01595 Cyclin M transmembrane N-terminal domain DN399_09815 PF03471 Transporter associated domain DN399_09830 PF05525 Branched-chain amino acid transport protein DN399_09835 PF01588 Putative tRNA binding domain DN399_09855 PF07454 Stage II sporulation protein P (SpoIIP) DN399_09865 PF02557 D-alanyl-D-alanine carboxypeptidase DN399_09875 PF01425 Amidase DN399_09880 PF07690 Major Facilitator Superfamily DN399_09890 PF01145 SPFH domain / Band 7 family DN399_09895 PF07454 Stage II sporulation protein P (SpoIIP) DN399_09920 PF01168 Alanine racemase, N-terminal domain DN399_09920 PF00842 Alanine racemase, C-terminal domain DN399_09940 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN399_09945 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_09945 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_09950 PF00155 Aminotransferase class I and II DN399_09950 PF00392 Bacterial regulatory proteins, gntR family DN399_09980 PF00583 Acetyltransferase (GNAT) family DN399_09995 PF06013 Proteins of 100 residues with WXG DN399_10010 PF08817 WXG100 protein secretion system (Wss), protein YukD DN399_10015 PF10140 WXG100 protein secretion system (Wss), protein YukC DN399_10020 PF01580 FtsK/SpoIIIE family DN399_10020 PF12538 DNA transporter DN399_10070 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN399_10095 PF01209 ubiE/COQ5 methyltransferase family DN399_10100 PF01268 Formate--tetrahydrofolate ligase DN399_10110 PF00270 DEAD/DEAH box helicase DN399_10110 PF00271 Helicase conserved C-terminal domain DN399_10115 PF01261 Xylose isomerase-like TIM barrel DN399_10120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_10130 PF08240 Alcohol dehydrogenase GroES-like domain DN399_10130 PF00107 Zinc-binding dehydrogenase DN399_10135 PF04542 Sigma-70 region 2 DN399_10135 PF08281 Sigma-70, region 4 DN399_10160 PF00255 Glutathione peroxidase DN399_10165 PF13559 Domain of unknown function (DUF4129) DN399_10165 PF01841 Transglutaminase-like superfamily DN399_10165 PF11992 Domain of unknown function (DUF3488) DN399_10170 PF01882 Protein of unknown function DUF58 DN399_10175 PF07726 ATPase family associated with various cellular activities (AAA) DN399_10175 PF17863 AAA lid domain DN399_10180 PF14710 Respiratory nitrate reductase alpha N-terminal DN399_10180 PF01568 Molydopterin dinucleotide binding domain DN399_10180 PF00384 Molybdopterin oxidoreductase DN399_10185 PF13247 4Fe-4S dicluster domain DN399_10185 PF14711 Respiratory nitrate reductase beta C-terminal DN399_10190 PF02613 Nitrate reductase delta subunit DN399_10195 PF02665 Nitrate reductase gamma subunit DN399_10200 PF00027 Cyclic nucleotide-binding domain DN399_10200 PF00325 Bacterial regulatory proteins, crp family DN399_10205 PF06463 Molybdenum Cofactor Synthesis C DN399_10205 PF04055 Radical SAM superfamily DN399_10210 PF00899 ThiF family DN399_10215 PF03453 MoeA N-terminal region (domain I and II) DN399_10215 PF00994 Probable molybdopterin binding domain DN399_10215 PF03454 MoeA C-terminal region (domain IV) DN399_10220 PF02391 MoaE protein DN399_10230 PF07690 Major Facilitator Superfamily DN399_10260 PF01903 CbiX DN399_10265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN399_10270 PF00355 Rieske [2Fe-2S] domain DN399_10275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN399_10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_10275 PF18267 Rubredoxin NAD+ reductase C-terminal domain DN399_10275 PF04324 BFD-like [2Fe-2S] binding domain DN399_10275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN399_10280 PF01814 Hemerythrin HHE cation binding domain DN399_10280 PF04405 Domain of Unknown function (DUF542) DN399_10315 PF04232 Stage V sporulation protein S (SpoVS) DN399_10340 PF17874 MalT-like TPR region DN399_10340 PF18801 response regulator aspartate phosphatase H, N terminal DN399_10355 PF01966 HD domain DN399_10360 PF16326 ABC transporter C-terminal domain DN399_10360 PF00005 ABC transporter DN399_10360 PF12848 ABC transporter DN399_10375 PF00436 Single-strand binding protein family DN399_10385 PF08712 Scaffold protein Nfu/NifU N terminal DN399_10385 PF13769 Virulence factor DN399_10395 PF06491 Disulphide isomerase DN399_10400 PF04445 Putative SAM-dependent methyltransferase DN399_10405 PF05746 DALR anticodon binding domain DN399_10405 PF03485 Arginyl tRNA synthetase N terminal domain DN399_10405 PF00750 tRNA synthetases class I (R) DN399_10430 PF08264 Anticodon-binding domain of tRNA DN399_10430 PF00133 tRNA synthetases class I (I, L, M and V) DN399_10460 PF00152 tRNA synthetases class II (D, K and N) DN399_10460 PF01336 OB-fold nucleic acid binding domain DN399_10465 PF00209 Sodium:neurotransmitter symporter family DN399_10480 PF10997 Alternate to MurJ DN399_10485 PF13419 Haloacid dehalogenase-like hydrolase DN399_10495 PF00465 Iron-containing alcohol dehydrogenase DN399_10500 PF01177 Asp/Glu/Hydantoin racemase DN399_10505 PF01980 tRNA-methyltransferase O DN399_10510 PF00583 Acetyltransferase (GNAT) family DN399_10515 PF11188 Protein of unknown function (DUF2975) DN399_10520 PF13443 Cro/C1-type HTH DNA-binding domain DN399_10535 PF00005 ABC transporter DN399_10540 PF05975 Bacterial ABC transporter protein EcsB DN399_10545 PF14005 YpjP-like protein DN399_10550 PF13419 Haloacid dehalogenase-like hydrolase DN399_10565 PF07930 D-aminopeptidase, domain B DN399_10565 PF00144 Beta-lactamase DN399_10570 PF00303 Thymidylate synthase DN399_10575 PF00186 Dihydrofolate reductase DN399_10580 PF03717 Penicillin-binding Protein dimerisation domain DN399_10580 PF00905 Penicillin binding protein transpeptidase domain DN399_10580 PF05223 NTF2-like N-terminal transpeptidase domain DN399_10585 PF02525 Flavodoxin-like fold DN399_10590 PF01553 Acyltransferase DN399_10595 PF03006 Haemolysin-III related DN399_10600 PF02416 mttA/Hcf106 family DN399_10605 PF00902 Sec-independent protein translocase protein (TatC) DN399_10615 PF02645 Uncharacterised protein, DegV family COG1307 DN399_10625 PF02630 SCO1/SenC DN399_10630 PF00011 Hsp20/alpha crystallin family DN399_10635 PF00733 Asparagine synthase DN399_10635 PF13537 Glutamine amidotransferase domain DN399_10650 PF05036 Sporulation related domain DN399_10650 PF01520 N-acetylmuramoyl-L-alanine amidase DN399_10655 PF01497 Periplasmic binding protein DN399_10660 PF01063 Amino-transferase class IV DN399_10665 PF00881 Nitroreductase family DN399_10680 PF00857 Isochorismatase family DN399_10690 PF00011 Hsp20/alpha crystallin family DN399_10695 PF00924 Mechanosensitive ion channel DN399_10700 PF13185 GAF domain DN399_10700 PF07730 Histidine kinase DN399_10705 PF00072 Response regulator receiver domain DN399_10705 PF00196 Bacterial regulatory proteins, luxR family DN399_10710 PF01418 Helix-turn-helix domain, rpiR family DN399_10710 PF01380 SIS domain DN399_10715 PF02567 Phenazine biosynthesis-like protein DN399_10720 PF08240 Alcohol dehydrogenase GroES-like domain DN399_10720 PF00107 Zinc-binding dehydrogenase DN399_10735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN399_10735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN399_10740 PF02447 GntP family permease DN399_10745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN399_10745 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN399_10750 PF10924 Protein of unknown function (DUF2711) DN399_10765 PF03358 NADPH-dependent FMN reductase DN399_10780 PF00005 ABC transporter DN399_10780 PF00571 CBS domain DN399_10785 PF00528 Binding-protein-dependent transport system inner membrane component DN399_10790 PF13520 Amino acid permease DN399_10820 PF01595 Cyclin M transmembrane N-terminal domain DN399_10820 PF00571 CBS domain DN399_10820 PF03471 Transporter associated domain DN399_10825 PF00171 Aldehyde dehydrogenase family DN399_10830 PF07997 Protein of unknown function (DUF1694) DN399_10835 PF09385 Histidine kinase N terminal DN399_10845 PF00202 Aminotransferase class-III DN399_10850 PF01144 Coenzyme A transferase DN399_10855 PF01144 Coenzyme A transferase DN399_10860 PF07687 Peptidase dimerisation domain DN399_10860 PF01546 Peptidase family M20/M25/M40 DN399_10865 PF00583 Acetyltransferase (GNAT) family DN399_10870 PF00158 Sigma-54 interaction domain DN399_10870 PF13426 PAS domain DN399_10870 PF02954 Bacterial regulatory protein, Fis family DN399_10875 PF12544 Lysine-2,3-aminomutase DN399_10880 PF14122 YokU-like protein, putative antitoxin DN399_10885 PF06855 YozE SAM-like fold DN399_10900 PF14162 YozD-like protein DN399_10910 PF00069 Protein kinase domain DN399_10910 PF08239 Bacterial SH3 domain DN399_10920 PF01569 PAP2 superfamily DN399_10925 PF01545 Cation efflux family DN399_10925 PF16916 Dimerisation domain of Zinc Transporter DN399_10930 PF00085 Thioredoxin DN399_10995 PF10676 Spore germination protein gerPA/gerPF DN399_11010 PF00106 short chain dehydrogenase DN399_11030 PF00912 Transglycosylase DN399_11030 PF00905 Penicillin binding protein transpeptidase domain DN399_11040 PF07690 Major Facilitator Superfamily DN399_11045 PF01521 Iron-sulphur cluster biosynthesis DN399_11050 PF00285 Citrate synthase, C-terminal domain DN399_11055 PF03972 MmgE/PrpD family DN399_11065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN399_11065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN399_11065 PF02770 Acyl-CoA dehydrogenase, middle domain DN399_11070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN399_11070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN399_11075 PF00171 Aldehyde dehydrogenase family DN399_11080 PF01810 LysE type translocator DN399_11085 PF00378 Enoyl-CoA hydratase/isomerase DN399_11100 PF12320 Type 5 capsule protein repressor C-terminal domain DN399_11100 PF00149 Calcineurin-like phosphoesterase DN399_11105 PF13476 AAA domain DN399_11110 PF01022 Bacterial regulatory protein, arsR family DN399_11130 PF07690 Major Facilitator Superfamily DN399_11135 PF00106 short chain dehydrogenase DN399_11140 PF00425 chorismate binding enzyme DN399_11145 PF13193 AMP-binding enzyme C-terminal domain DN399_11145 PF00501 AMP-binding enzyme DN399_11150 PF00857 Isochorismatase family DN399_11150 PF00550 Phosphopantetheine attachment site DN399_11155 PF00975 Thioesterase domain DN399_11155 PF00501 AMP-binding enzyme DN399_11155 PF13193 AMP-binding enzyme C-terminal domain DN399_11155 PF00550 Phosphopantetheine attachment site DN399_11155 PF00668 Condensation domain DN399_11160 PF03621 MbtH-like protein DN399_11165 PF07690 Major Facilitator Superfamily DN399_11180 PF00216 Bacterial DNA-binding protein DN399_11190 PF05163 DinB family DN399_11195 PF00082 Subtilase family DN399_11200 PF01235 Sodium:alanine symporter family DN399_11220 PF01479 S4 domain DN399_11220 PF00849 RNA pseudouridylate synthase DN399_11225 PF02824 TGS domain DN399_11225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN399_11225 PF03129 Anticodon binding domain DN399_11225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN399_11230 PF00005 ABC transporter DN399_11240 PF07690 Major Facilitator Superfamily DN399_11255 PF00205 Thiamine pyrophosphate enzyme, central domain DN399_11255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN399_11255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN399_11295 PF00027 Cyclic nucleotide-binding domain DN399_11305 PF00561 alpha/beta hydrolase fold DN399_11315 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN399_11315 PF00753 Metallo-beta-lactamase superfamily DN399_11325 PF03176 MMPL family DN399_11335 PF00302 Chloramphenicol acetyltransferase DN399_11345 PF00583 Acetyltransferase (GNAT) family DN399_11375 PF13302 Acetyltransferase (GNAT) domain DN399_11385 PF00313 'Cold-shock' DNA-binding domain DN399_11410 PF03466 LysR substrate binding domain DN399_11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_11415 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN399_11415 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN399_11435 PF03466 LysR substrate binding domain DN399_11435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_11440 PF03473 MOSC domain DN399_11440 PF03475 3-alpha domain DN399_11455 PF00005 ABC transporter DN399_11455 PF00664 ABC transporter transmembrane region DN399_11460 PF00664 ABC transporter transmembrane region DN399_11460 PF00005 ABC transporter DN399_11485 PF01810 LysE type translocator DN399_11490 PF07883 Cupin domain DN399_11490 PF01381 Helix-turn-helix DN399_11525 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_11525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN399_11530 PF12680 SnoaL-like domain DN399_11530 PF08281 Sigma-70, region 4 DN399_11530 PF04542 Sigma-70 region 2 DN399_11550 PF02638 Glycosyl hydrolase-like 10 DN399_11560 PF02378 Phosphotransferase system, EIIC DN399_11570 PF03702 Anhydro-N-acetylmuramic acid kinase DN399_11575 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN399_11580 PF02660 Glycerol-3-phosphate acyltransferase DN399_11585 PF00266 Aminotransferase class-V DN399_11590 PF00291 Pyridoxal-phosphate dependent enzyme DN399_11595 PF01047 MarR family DN399_11600 PF07690 Major Facilitator Superfamily DN399_11610 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN399_11610 PF00753 Metallo-beta-lactamase superfamily DN399_11620 PF00271 Helicase conserved C-terminal domain DN399_11620 PF00270 DEAD/DEAH box helicase DN399_11685 PF00589 Phage integrase family DN399_11690 PF00561 alpha/beta hydrolase fold DN399_11710 PF05105 Bacteriophage holin family DN399_11715 PF01510 N-acetylmuramoyl-L-alanine amidase DN399_11715 PF01476 LysM domain DN399_11715 PF01471 Putative peptidoglycan binding domain DN399_11730 PF09313 Domain of unknown function (DUF1971) DN399_11730 PF03848 Tellurite resistance protein TehB DN399_11745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN399_11745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN399_11745 PF00205 Thiamine pyrophosphate enzyme, central domain DN399_11750 PF12802 MarR family DN399_11755 PF00300 Histidine phosphatase superfamily (branch 1) DN399_11760 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DN399_11775 PF07687 Peptidase dimerisation domain DN399_11775 PF01546 Peptidase family M20/M25/M40 DN399_11790 PF00196 Bacterial regulatory proteins, luxR family DN399_11790 PF00072 Response regulator receiver domain DN399_11800 PF18277 AbrB C-terminal domain DN399_11800 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN399_11810 PF01925 Sulfite exporter TauE/SafE DN399_11815 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_11830 PF07690 Major Facilitator Superfamily DN399_11835 PF00550 Phosphopantetheine attachment site DN399_11835 PF00668 Condensation domain DN399_11835 PF13193 AMP-binding enzyme C-terminal domain DN399_11835 PF00501 AMP-binding enzyme DN399_11840 PF00550 Phosphopantetheine attachment site DN399_11840 PF00668 Condensation domain DN399_11840 PF13193 AMP-binding enzyme C-terminal domain DN399_11840 PF00501 AMP-binding enzyme DN399_11840 PF07993 Male sterility protein DN399_11845 PF00501 AMP-binding enzyme DN399_11845 PF13193 AMP-binding enzyme C-terminal domain DN399_11845 PF00668 Condensation domain DN399_11845 PF00550 Phosphopantetheine attachment site DN399_11850 PF01648 4'-phosphopantetheinyl transferase superfamily DN399_11855 PF00975 Thioesterase domain DN399_11880 PF05139 Erythromycin esterase DN399_11895 PF13302 Acetyltransferase (GNAT) domain DN399_11905 PF01520 N-acetylmuramoyl-L-alanine amidase DN399_11905 PF00395 S-layer homology domain DN399_11940 PF00027 Cyclic nucleotide-binding domain DN399_11940 PF01734 Patatin-like phospholipase DN399_11960 PF03315 Serine dehydratase beta chain DN399_11960 PF01842 ACT domain DN399_11965 PF03313 Serine dehydratase alpha chain DN399_11980 PF00672 HAMP domain DN399_11980 PF02743 Cache domain DN399_11980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_12005 PF18665 Tetracyclin repressor-like, C-terminal domain DN399_12005 PF00440 Bacterial regulatory proteins, tetR family DN399_12010 PF01752 Collagenase DN399_12010 PF08453 Peptidase family M9 N-terminal DN399_12010 PF18496 Collagenase G catalytic helper subdomain DN399_12015 PF00144 Beta-lactamase DN399_12015 PF11954 Domain of unknown function (DUF3471) DN399_12020 PF05223 NTF2-like N-terminal transpeptidase domain DN399_12020 PF00905 Penicillin binding protein transpeptidase domain DN399_12020 PF03717 Penicillin-binding Protein dimerisation domain DN399_12025 PF04542 Sigma-70 region 2 DN399_12025 PF08281 Sigma-70, region 4 DN399_12035 PF03717 Penicillin-binding Protein dimerisation domain DN399_12035 PF00905 Penicillin binding protein transpeptidase domain DN399_12050 PF00149 Calcineurin-like phosphoesterase DN399_12060 PF00005 ABC transporter DN399_12070 PF00440 Bacterial regulatory proteins, tetR family DN399_12070 PF08359 YsiA-like protein, C-terminal region DN399_12085 PF02770 Acyl-CoA dehydrogenase, middle domain DN399_12085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN399_12085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN399_12090 PF02785 Biotin carboxylase C-terminal domain DN399_12090 PF00289 Biotin carboxylase, N-terminal domain DN399_12090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN399_12095 PF00364 Biotin-requiring enzyme DN399_12100 PF00682 HMGL-like DN399_12105 PF00378 Enoyl-CoA hydratase/isomerase DN399_12110 PF01039 Carboxyl transferase domain DN399_12115 PF16177 Acetyl-coenzyme A synthetase N-terminus DN399_12115 PF13193 AMP-binding enzyme C-terminal domain DN399_12115 PF00501 AMP-binding enzyme DN399_12145 PF00485 Phosphoribulokinase / Uridine kinase family DN399_12170 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_12170 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_12175 PF00512 His Kinase A (phospho-acceptor) domain DN399_12180 PF00486 Transcriptional regulatory protein, C terminal DN399_12180 PF00072 Response regulator receiver domain DN399_12185 PF01966 HD domain DN399_12195 PF01048 Phosphorylase superfamily DN399_12210 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN399_12210 PF01447 Thermolysin metallopeptidase, catalytic domain DN399_12210 PF03413 Peptidase propeptide and YPEB domain DN399_12210 PF07504 Fungalysin/Thermolysin Propeptide Motif DN399_12215 PF17853 GGDEF-like domain DN399_12215 PF12833 Helix-turn-helix domain DN399_12230 PF05737 Collagen binding domain DN399_12230 PF05738 Cna protein B-type domain DN399_12230 PF17802 Prealbumin-like fold domain DN399_12245 PF17755 UvrA DNA-binding domain DN399_12245 PF17760 UvrA interaction domain DN399_12245 PF00005 ABC transporter DN399_12250 PF09278 MerR, DNA binding DN399_12250 PF00376 MerR family regulatory protein DN399_12255 PF07690 Major Facilitator Superfamily DN399_12270 PF01638 HxlR-like helix-turn-helix DN399_12275 PF13847 Methyltransferase domain DN399_12315 PF00392 Bacterial regulatory proteins, gntR family DN399_12315 PF00155 Aminotransferase class I and II DN399_12325 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DN399_12325 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DN399_12340 PF08240 Alcohol dehydrogenase GroES-like domain DN399_12340 PF00107 Zinc-binding dehydrogenase DN399_12350 PF04239 Protein of unknown function (DUF421) DN399_12365 PF08450 SMP-30/Gluconolactonase/LRE-like region DN399_12380 PF07486 Cell Wall Hydrolase DN399_12390 PF00072 Response regulator receiver domain DN399_12390 PF00486 Transcriptional regulatory protein, C terminal DN399_12395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_12415 PF00005 ABC transporter DN399_12420 PF02687 FtsX-like permease family DN399_12440 PF01842 ACT domain DN399_12440 PF03447 Homoserine dehydrogenase, NAD binding domain DN399_12440 PF00742 Homoserine dehydrogenase DN399_12445 PF00155 Aminotransferase class I and II DN399_12445 PF00392 Bacterial regulatory proteins, gntR family DN399_12450 PF07478 D-ala D-ala ligase C-terminus DN399_12450 PF01820 D-ala D-ala ligase N-terminus DN399_12455 PF03070 TENA/THI-4/PQQC family DN399_12485 PF00589 Phage integrase family DN399_12485 PF14659 Phage integrase, N-terminal SAM-like domain DN399_12565 PF13302 Acetyltransferase (GNAT) domain DN399_12585 PF01555 DNA methylase DN399_12600 PF00589 Phage integrase family DN399_12660 PF00574 Clp protease DN399_12740 PF05105 Bacteriophage holin family DN399_12795 PF00067 Cytochrome P450 DN399_12815 PF07561 Domain of Unknown Function (DUF1540) DN399_12825 PF00067 Cytochrome P450 DN399_12840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_12840 PF00989 PAS fold DN399_12840 PF13188 PAS domain DN399_12840 PF13426 PAS domain DN399_12840 PF00512 His Kinase A (phospho-acceptor) domain DN399_12850 PF10502 Signal peptidase, peptidase S26 DN399_12855 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN399_12860 PF01177 Asp/Glu/Hydantoin racemase DN399_12865 PF07155 ECF-type riboflavin transporter, S component DN399_12870 PF12558 ATP-binding cassette cobalt transporter DN399_12870 PF00005 ABC transporter DN399_12885 PF00512 His Kinase A (phospho-acceptor) domain DN399_12885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_12925 PF10676 Spore germination protein gerPA/gerPF DN399_12960 PF00067 Cytochrome P450 DN399_12965 PF01636 Phosphotransferase enzyme family DN399_13010 PF00072 Response regulator receiver domain DN399_13010 PF00486 Transcriptional regulatory protein, C terminal DN399_13015 PF00512 His Kinase A (phospho-acceptor) domain DN399_13015 PF18719 ArlS sensor domain DN399_13015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_13020 PF00107 Zinc-binding dehydrogenase DN399_13020 PF08240 Alcohol dehydrogenase GroES-like domain DN399_13025 PF01569 PAP2 superfamily DN399_13070 PF01965 DJ-1/PfpI family DN399_13085 PF03009 Glycerophosphoryl diester phosphodiesterase family DN399_13105 PF00392 Bacterial regulatory proteins, gntR family DN399_13105 PF00155 Aminotransferase class I and II DN399_13110 PF00892 EamA-like transporter family DN399_13115 PF01270 Glycosyl hydrolases family 8 DN399_13120 PF01156 Inosine-uridine preferring nucleoside hydrolase DN399_13135 PF00293 NUDIX domain DN399_13135 PF13344 Haloacid dehalogenase-like hydrolase DN399_13150 PF07690 Major Facilitator Superfamily DN399_13160 PF09297 NADH pyrophosphatase zinc ribbon domain DN399_13160 PF00293 NUDIX domain DN399_13165 PF02767 DNA polymerase III beta subunit, central domain DN399_13165 PF02768 DNA polymerase III beta subunit, C-terminal domain DN399_13165 PF00712 DNA polymerase III beta subunit, N-terminal domain DN399_13175 PF12706 Beta-lactamase superfamily domain DN399_13185 PF09234 Domain of unknown function (DUF1963) DN399_13210 PF01734 Patatin-like phospholipase DN399_13215 PF08000 Bacterial PH domain DN399_13225 PF12867 DinB superfamily DN399_13240 PF02673 Bacitracin resistance protein BacA DN399_13250 PF01541 GIY-YIG catalytic domain DN399_13290 PF01266 FAD dependent oxidoreductase DN399_13320 PF00144 Beta-lactamase DN399_13325 PF13419 Haloacid dehalogenase-like hydrolase DN399_13330 PF00072 Response regulator receiver domain DN399_13330 PF00486 Transcriptional regulatory protein, C terminal DN399_13335 PF00989 PAS fold DN399_13335 PF00512 His Kinase A (phospho-acceptor) domain DN399_13335 PF16736 Single Cache-like DN399_13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_13350 PF00005 ABC transporter DN399_13355 PF02687 FtsX-like permease family DN399_13355 PF12704 MacB-like periplasmic core domain DN399_13365 PF07859 alpha/beta hydrolase fold DN399_13370 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN399_13375 PF00550 Phosphopantetheine attachment site DN399_13375 PF00668 Condensation domain DN399_13375 PF13193 AMP-binding enzyme C-terminal domain DN399_13375 PF00501 AMP-binding enzyme DN399_13385 PF00128 Alpha amylase, catalytic domain DN399_13385 PF03714 Bacterial pullanase-associated domain DN399_13385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN399_13390 PF03413 Peptidase propeptide and YPEB domain DN399_13390 PF01447 Thermolysin metallopeptidase, catalytic domain DN399_13390 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN399_13390 PF07504 Fungalysin/Thermolysin Propeptide Motif DN399_13395 PF02872 5'-nucleotidase, C-terminal domain DN399_13395 PF00149 Calcineurin-like phosphoesterase DN399_13415 PF00344 SecY translocase DN399_13420 PF00892 EamA-like transporter family DN399_13425 PF00155 Aminotransferase class I and II DN399_13425 PF00392 Bacterial regulatory proteins, gntR family DN399_13430 PF00561 alpha/beta hydrolase fold DN399_13455 PF06081 Aromatic acid exporter family member 1 DN399_13455 PF06081 Aromatic acid exporter family member 1 DN399_13470 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN399_13475 PF03413 Peptidase propeptide and YPEB domain DN399_13475 PF14620 YpeB sporulation DN399_13480 PF01471 Putative peptidoglycan binding domain DN399_13480 PF07486 Cell Wall Hydrolase DN399_13500 PF03301 Tryptophan 2,3-dioxygenase DN399_13505 PF04199 Putative cyclase DN399_13510 PF00266 Aminotransferase class-V DN399_13515 PF00440 Bacterial regulatory proteins, tetR family DN399_13515 PF08359 YsiA-like protein, C-terminal region DN399_13540 PF00158 Sigma-54 interaction domain DN399_13540 PF01590 GAF domain DN399_13540 PF02954 Bacterial regulatory protein, Fis family DN399_13550 PF13302 Acetyltransferase (GNAT) domain DN399_13555 PF08220 DeoR-like helix-turn-helix domain DN399_13555 PF00455 DeoR C terminal sensor domain DN399_13570 PF02082 Transcriptional regulator DN399_13585 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_13585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN399_13590 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN399_13590 PF00364 Biotin-requiring enzyme DN399_13590 PF02817 e3 binding domain DN399_13595 PF02780 Transketolase, C-terminal domain DN399_13595 PF02779 Transketolase, pyrimidine binding domain DN399_13600 PF00676 Dehydrogenase E1 component DN399_13610 PF00106 short chain dehydrogenase DN399_13615 PF13789 Domain of unknown function (DUF4181) DN399_13640 PF00528 Binding-protein-dependent transport system inner membrane component DN399_13645 PF00571 CBS domain DN399_13645 PF00005 ABC transporter DN399_13650 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN399_13655 PF00574 Clp protease DN399_13670 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DN399_13675 PF13673 Acetyltransferase (GNAT) domain DN399_13680 PF18416 N-acetylglucosamine binding protein domain 2 DN399_13680 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN399_13685 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN399_13690 PF03781 Sulfatase-modifying factor enzyme 1 DN399_13705 PF10990 Protein of unknown function (DUF2809) DN399_13710 PF08241 Methyltransferase domain DN399_13715 PF04237 YjbR DN399_13760 PF00583 Acetyltransferase (GNAT) family DN399_13765 PF13538 UvrD-like helicase C-terminal domain DN399_13780 PF00570 HRDC domain DN399_13780 PF16124 RecQ zinc-binding DN399_13780 PF00271 Helicase conserved C-terminal domain DN399_13780 PF09382 RQC domain DN399_13780 PF00270 DEAD/DEAH box helicase DN399_13805 PF01510 N-acetylmuramoyl-L-alanine amidase DN399_13805 PF12123 N-acetylmuramoyl-l-alanine amidase DN399_13830 PF02833 DHHA2 domain DN399_13830 PF01368 DHH family DN399_13835 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN399_13835 PF18416 N-acetylglucosamine binding protein domain 2 DN399_13850 PF03193 RsgA GTPase DN399_13855 PF02627 Carboxymuconolactone decarboxylase family DN399_13860 PF01235 Sodium:alanine symporter family DN399_13865 PF00171 Aldehyde dehydrogenase family DN399_13870 PF00701 Dihydrodipicolinate synthetase family DN399_13875 PF05544 Proline racemase DN399_13880 PF05544 Proline racemase DN399_13885 PF01266 FAD dependent oxidoreductase DN399_13890 PF00158 Sigma-54 interaction domain DN399_13890 PF02954 Bacterial regulatory protein, Fis family DN399_13890 PF13188 PAS domain DN399_13895 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_13895 PF04324 BFD-like [2Fe-2S] binding domain DN399_13905 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_13905 PF04324 BFD-like [2Fe-2S] binding domain DN399_13920 PF08876 Domain of unknown function (DUF1836) DN399_13925 PF09335 SNARE associated Golgi protein DN399_13935 PF04914 DltD protein DN399_13945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_13950 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DN399_13950 PF00877 NlpC/P60 family DN399_13955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN399_13955 PF13378 Enolase C-terminal domain-like DN399_13970 PF00248 Aldo/keto reductase family DN399_13975 PF01965 DJ-1/PfpI family DN399_14005 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DN399_14005 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DN399_14015 PF00672 HAMP domain DN399_14015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_14015 PF00512 His Kinase A (phospho-acceptor) domain DN399_14020 PF00486 Transcriptional regulatory protein, C terminal DN399_14020 PF00072 Response regulator receiver domain DN399_14040 PF13419 Haloacid dehalogenase-like hydrolase DN399_14045 PF01048 Phosphorylase superfamily DN399_14050 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN399_14055 PF08439 Oligopeptidase F DN399_14055 PF01432 Peptidase family M3 DN399_14060 PF02645 Uncharacterised protein, DegV family COG1307 DN399_14065 PF07552 Spore Coat Protein X and V domain DN399_14100 PF07690 Major Facilitator Superfamily DN399_14110 PF04519 Polymer-forming cytoskeletal DN399_14115 PF13171 Protein of unknown function (DUF4004) DN399_14120 PF12793 Sugar transport-related sRNA regulator N-term DN399_14120 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_14125 PF07690 Major Facilitator Superfamily DN399_14145 PF04226 Transglycosylase associated protein DN399_14160 PF08241 Methyltransferase domain DN399_14195 PF00155 Aminotransferase class I and II DN399_14200 PF07977 FabA-like domain DN399_14205 PF03630 Fumble DN399_14250 PF01594 AI-2E family transporter DN399_14260 PF00296 Luciferase-like monooxygenase DN399_14265 PF00528 Binding-protein-dependent transport system inner membrane component DN399_14270 PF09084 NMT1/THI5 like DN399_14275 PF00005 ABC transporter DN399_14310 PF02522 Aminoglycoside 3-N-acetyltransferase DN399_14330 PF13536 Putative multidrug resistance efflux transporter DN399_14360 PF08713 DNA alkylation repair enzyme DN399_14365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_14375 PF01522 Polysaccharide deacetylase DN399_14385 PF03741 Integral membrane protein TerC family DN399_14390 PF00884 Sulfatase DN399_14395 PF12848 ABC transporter DN399_14395 PF00005 ABC transporter DN399_14400 PF03176 MMPL family DN399_14405 PF16295 Tetracyclin repressor-like, C-terminal domain DN399_14405 PF00440 Bacterial regulatory proteins, tetR family DN399_14415 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN399_14420 PF02153 Prephenate dehydrogenase DN399_14420 PF01842 ACT domain DN399_14425 PF00155 Aminotransferase class I and II DN399_14430 PF01264 Chorismate synthase DN399_14435 PF00793 DAHP synthetase I family DN399_14435 PF01817 Chorismate mutase type II DN399_14460 PF01636 Phosphotransferase enzyme family DN399_14485 PF01476 LysM domain DN399_14485 PF06725 3D domain DN399_14495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_14500 PF08031 Berberine and berberine like DN399_14500 PF01565 FAD binding domain DN399_14520 PF06039 Malate:quinone oxidoreductase (Mqo) DN399_14525 PF13407 Periplasmic binding protein domain DN399_14530 PF02653 Branched-chain amino acid transport system / permease component DN399_14535 PF02653 Branched-chain amino acid transport system / permease component DN399_14540 PF00005 ABC transporter DN399_14545 PF04198 Putative sugar-binding domain DN399_14545 PF00325 Bacterial regulatory proteins, crp family DN399_14550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN399_14550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN399_14560 PF01791 DeoC/LacD family aldolase DN399_14570 PF03992 Antibiotic biosynthesis monooxygenase DN399_14590 PF01773 Na+ dependent nucleoside transporter N-terminus DN399_14590 PF07662 Na+ dependent nucleoside transporter C-terminus DN399_14595 PF00171 Aldehyde dehydrogenase family DN399_14600 PF00696 Amino acid kinase family DN399_14600 PF01472 PUA domain DN399_14605 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN399_14605 PF03807 NADP oxidoreductase coenzyme F420-dependent DN399_14610 PF01546 Peptidase family M20/M25/M40 DN399_14615 PF09339 IclR helix-turn-helix domain DN399_14615 PF01614 Bacterial transcriptional regulator DN399_14625 PF00324 Amino acid permease DN399_14635 PF00487 Fatty acid desaturase DN399_14640 PF05547 Immune inhibitor A peptidase M6 DN399_14645 PF04294 VanW like protein DN399_14650 PF00245 Alkaline phosphatase DN399_14655 PF11188 Protein of unknown function (DUF2975) DN399_14660 PF13443 Cro/C1-type HTH DNA-binding domain DN399_14675 PF10086 YhfC intramembrane metalloprotease DN399_14685 PF00072 Response regulator receiver domain DN399_14685 PF04397 LytTr DNA-binding domain DN399_14695 PF13302 Acetyltransferase (GNAT) domain DN399_14700 PF12681 Glyoxalase-like domain DN399_14730 PF07726 ATPase family associated with various cellular activities (AAA) DN399_14730 PF17863 AAA lid domain DN399_14745 PF07690 Major Facilitator Superfamily DN399_14755 PF00535 Glycosyl transferase family 2 DN399_14770 PF00535 Glycosyl transferase family 2 DN399_14775 PF00535 Glycosyl transferase family 2 DN399_14785 PF00202 Aminotransferase class-III DN399_14790 PF00199 Catalase DN399_14790 PF06628 Catalase-related immune-responsive DN399_14795 PF18496 Collagenase G catalytic helper subdomain DN399_14795 PF04151 Bacterial pre-peptidase C-terminal domain DN399_14795 PF08453 Peptidase family M9 N-terminal DN399_14795 PF01752 Collagenase DN399_14805 PF01979 Amidohydrolase family DN399_14805 PF13382 Adenine deaminase C-terminal domain DN399_14810 PF00144 Beta-lactamase DN399_14830 PF17863 AAA lid domain DN399_14830 PF07726 ATPase family associated with various cellular activities (AAA) DN399_14855 PF14436 Bacterial EndoU nuclease DN399_14855 PF04740 LXG domain of WXG superfamily DN399_14875 PF00881 Nitroreductase family DN399_14880 PF01047 MarR family DN399_14890 PF14492 Elongation Factor G, domain II DN399_14890 PF03764 Elongation factor G, domain IV DN399_14890 PF00009 Elongation factor Tu GTP binding domain DN399_14890 PF00679 Elongation factor G C-terminus DN399_14900 PF00293 NUDIX domain DN399_14905 PF05406 WGR domain DN399_14925 PF12833 Helix-turn-helix domain DN399_14930 PF00583 Acetyltransferase (GNAT) family DN399_14945 PF00892 EamA-like transporter family DN399_14950 PF00155 Aminotransferase class I and II DN399_14950 PF00392 Bacterial regulatory proteins, gntR family DN399_14955 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DN399_14960 PF13031 Protein of unknown function (DUF3892) DN399_14990 PF01925 Sulfite exporter TauE/SafE DN399_15000 PF00324 Amino acid permease DN399_15010 PF08713 DNA alkylation repair enzyme DN399_15060 PF04989 Cephalosporin hydroxylase DN399_15065 PF10502 Signal peptidase, peptidase S26 DN399_15075 PF02146 Sir2 family DN399_15080 PF01470 Pyroglutamyl peptidase DN399_15095 PF03746 LamB/YcsF family DN399_15100 PF02626 Carboxyltransferase domain, subdomain A and B DN399_15105 PF02682 Carboxyltransferase domain, subdomain C and D DN399_15110 PF01614 Bacterial transcriptional regulator DN399_15110 PF09339 IclR helix-turn-helix domain DN399_15115 PF10502 Signal peptidase, peptidase S26 DN399_15120 PF03932 CutC family DN399_15135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN399_15135 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DN399_15135 PF02770 Acyl-CoA dehydrogenase, middle domain DN399_15165 PF10903 Protein of unknown function (DUF2691) DN399_15170 PF02915 Rubrerythrin DN399_15185 PF00440 Bacterial regulatory proteins, tetR family DN399_15190 PF05547 Immune inhibitor A peptidase M6 DN399_15195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN399_15195 PF00391 PEP-utilising enzyme, mobile domain DN399_15200 PF00753 Metallo-beta-lactamase superfamily DN399_15205 PF10710 Protein of unknown function (DUF2512) DN399_15210 PF11553 Protein of unknown function (DUF3231) DN399_15215 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN399_15220 PF08240 Alcohol dehydrogenase GroES-like domain DN399_15220 PF13823 Alcohol dehydrogenase GroES-associated DN399_15220 PF00107 Zinc-binding dehydrogenase DN399_15225 PF10415 Fumarase C C-terminus DN399_15225 PF00206 Lyase DN399_15230 PF17763 Glutaminase/Asparaginase C-terminal domain DN399_15230 PF00710 Asparaginase, N-terminal DN399_15235 PF01381 Helix-turn-helix DN399_15255 PF05504 Spore germination B3/ GerAC like, C-terminal DN399_15260 PF03845 Spore germination protein DN399_15265 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_15270 PF13188 PAS domain DN399_15270 PF00512 His Kinase A (phospho-acceptor) domain DN399_15270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_15270 PF13426 PAS domain DN399_15270 PF00989 PAS fold DN399_15275 PF05791 Bacillus haemolytic enterotoxin (HBL) DN399_15280 PF05791 Bacillus haemolytic enterotoxin (HBL) DN399_15295 PF17853 GGDEF-like domain DN399_15295 PF12833 Helix-turn-helix domain DN399_15320 PF13520 Amino acid permease DN399_15325 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN399_15325 PF03807 NADP oxidoreductase coenzyme F420-dependent DN399_15330 PF05504 Spore germination B3/ GerAC like, C-terminal DN399_15335 PF03845 Spore germination protein DN399_15340 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_15345 PF08664 YcbB domain DN399_15345 PF00072 Response regulator receiver domain DN399_15350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_15355 PF04960 Glutaminase DN399_15360 PF01235 Sodium:alanine symporter family DN399_15375 PF00144 Beta-lactamase DN399_15390 PF02872 5'-nucleotidase, C-terminal domain DN399_15390 PF00149 Calcineurin-like phosphoesterase DN399_15390 PF17936 Bacterial Ig domain DN399_15395 PF00561 alpha/beta hydrolase fold DN399_15400 PF00857 Isochorismatase family DN399_15415 PF01979 Amidohydrolase family DN399_15420 PF03466 LysR substrate binding domain DN399_15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_15425 PF01047 MarR family DN399_15430 PF01544 CorA-like Mg2+ transporter protein DN399_15450 PF13026 Protein of unknown function (DUF3887) DN399_15450 PF12146 Serine aminopeptidase, S33 DN399_15465 PF03073 TspO/MBR family DN399_15470 PF00875 DNA photolyase DN399_15470 PF03441 FAD binding domain of DNA photolyase DN399_15490 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) DN399_15495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN399_15495 PF00361 Proton-conducting membrane transporter DN399_15500 PF10057 Uncharacterized conserved protein (DUF2294) DN399_15505 PF01522 Polysaccharide deacetylase DN399_15515 PF01040 UbiA prenyltransferase family DN399_15530 PF01872 RibD C-terminal domain DN399_15540 PF07690 Major Facilitator Superfamily DN399_15545 PF00144 Beta-lactamase DN399_15555 PF00550 Phosphopantetheine attachment site DN399_15555 PF07993 Male sterility protein DN399_15560 PF18665 Tetracyclin repressor-like, C-terminal domain DN399_15560 PF00440 Bacterial regulatory proteins, tetR family DN399_15565 PF07690 Major Facilitator Superfamily DN399_15570 PF00440 Bacterial regulatory proteins, tetR family DN399_15580 PF01037 Lrp/AsnC ligand binding domain DN399_15595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_15605 PF00144 Beta-lactamase DN399_15610 PF08803 Putative mono-oxygenase ydhR DN399_15620 PF12802 MarR family DN399_15645 PF00667 FAD binding domain DN399_15645 PF00258 Flavodoxin DN399_15645 PF00175 Oxidoreductase NAD-binding domain DN399_15645 PF00067 Cytochrome P450 DN399_15650 PF07690 Major Facilitator Superfamily DN399_15665 PF00291 Pyridoxal-phosphate dependent enzyme DN399_15675 PF01139 tRNA-splicing ligase RtcB DN399_15685 PF04072 Leucine carboxyl methyltransferase DN399_15700 PF00005 ABC transporter DN399_15705 PF02687 FtsX-like permease family DN399_15725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_15725 PF00672 HAMP domain DN399_15725 PF00512 His Kinase A (phospho-acceptor) domain DN399_15730 PF00072 Response regulator receiver domain DN399_15730 PF00486 Transcriptional regulatory protein, C terminal DN399_15735 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_15735 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_15745 PF02016 LD-carboxypeptidase N-terminal domain DN399_15745 PF17676 LD-carboxypeptidase C-terminal domain DN399_15770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN399_15770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN399_15770 PF01842 ACT domain DN399_15775 PF00266 Aminotransferase class-V DN399_15800 PF01804 Penicillin amidase DN399_15815 PF01510 N-acetylmuramoyl-L-alanine amidase DN399_15815 PF01471 Putative peptidoglycan binding domain DN399_15815 PF01476 LysM domain DN399_15920 PF02557 D-alanyl-D-alanine carboxypeptidase DN399_15925 PF09587 Bacterial capsule synthesis protein PGA_cap DN399_15930 PF14044 NETI protein DN399_15935 PF07690 Major Facilitator Superfamily DN399_15945 PF12697 Alpha/beta hydrolase family DN399_15950 PF01047 MarR family DN399_15955 PF07690 Major Facilitator Superfamily DN399_15960 PF00144 Beta-lactamase DN399_15965 PF02667 Short chain fatty acid transporter DN399_15975 PF02525 Flavodoxin-like fold DN399_15995 PF14256 YwiC-like protein DN399_16005 PF00005 ABC transporter DN399_16025 PF03737 Aldolase/RraA DN399_16030 PF03606 C4-dicarboxylate anaerobic carrier DN399_16035 PF04231 Endonuclease I DN399_16060 PF04073 Aminoacyl-tRNA editing domain DN399_16065 PF13393 Histidyl-tRNA synthetase DN399_16065 PF03129 Anticodon binding domain DN399_16080 PF01638 HxlR-like helix-turn-helix DN399_16085 PF00881 Nitroreductase family DN399_16095 PF00391 PEP-utilising enzyme, mobile domain DN399_16095 PF00224 Pyruvate kinase, barrel domain DN399_16095 PF02887 Pyruvate kinase, alpha/beta domain DN399_16125 PF00005 ABC transporter DN399_16155 PF13419 Haloacid dehalogenase-like hydrolase DN399_16185 PF00293 NUDIX domain DN399_16185 PF13344 Haloacid dehalogenase-like hydrolase DN399_16190 PF00579 tRNA synthetases class I (W and Y) DN399_16200 PF01594 AI-2E family transporter DN399_16225 PF08003 Protein of unknown function (DUF1698) DN399_16255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_16265 PF01595 Cyclin M transmembrane N-terminal domain DN399_16265 PF03471 Transporter associated domain DN399_16265 PF00571 CBS domain DN399_16270 PF13411 MerR HTH family regulatory protein DN399_16280 PF00483 Nucleotidyl transferase DN399_16285 PF16363 GDP-mannose 4,6 dehydratase DN399_16290 PF08484 C-methyltransferase C-terminal domain DN399_16290 PF08421 Putative zinc binding domain DN399_16295 PF01370 NAD dependent epimerase/dehydratase family DN399_16310 PF00892 EamA-like transporter family DN399_16320 PF00805 Pentapeptide repeats (8 copies) DN399_16325 PF06906 Protein of unknown function (DUF1272) DN399_16330 PF10282 Lactonase, 7-bladed beta-propeller DN399_16335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN399_16335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN399_16340 PF02447 GntP family permease DN399_16345 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN399_16350 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN399_16350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN399_16355 PF00456 Transketolase, thiamine diphosphate binding domain DN399_16355 PF02780 Transketolase, C-terminal domain DN399_16355 PF02779 Transketolase, pyrimidine binding domain DN399_16360 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN399_16360 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN399_16365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN399_16365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN399_16375 PF08240 Alcohol dehydrogenase GroES-like domain DN399_16375 PF00107 Zinc-binding dehydrogenase DN399_16380 PF00296 Luciferase-like monooxygenase DN399_16385 PF13411 MerR HTH family regulatory protein DN399_16390 PF00106 short chain dehydrogenase DN399_16395 PF14765 Polyketide synthase dehydratase DN399_16395 PF00550 Phosphopantetheine attachment site DN399_16395 PF08659 KR domain DN399_16395 PF02801 Beta-ketoacyl synthase, C-terminal domain DN399_16395 PF00109 Beta-ketoacyl synthase, N-terminal domain DN399_16395 PF16197 Ketoacyl-synthetase C-terminal extension DN399_16395 PF00107 Zinc-binding dehydrogenase DN399_16395 PF08240 Alcohol dehydrogenase GroES-like domain DN399_16395 PF00698 Acyl transferase domain DN399_16400 PF00106 short chain dehydrogenase DN399_16405 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN399_16405 PF07504 Fungalysin/Thermolysin Propeptide Motif DN399_16405 PF03413 Peptidase propeptide and YPEB domain DN399_16405 PF01447 Thermolysin metallopeptidase, catalytic domain DN399_16415 PF12729 Four helix bundle sensory module for signal transduction DN399_16415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_16415 PF00672 HAMP domain DN399_16420 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) DN399_16425 PF01872 RibD C-terminal domain DN399_16425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN399_16430 PF00925 GTP cyclohydrolase II DN399_16435 PF01638 HxlR-like helix-turn-helix DN399_16450 PF00248 Aldo/keto reductase family DN399_16455 PF07690 Major Facilitator Superfamily DN399_16465 PF03928 Haem-degrading DN399_16480 PF08274 PhnA Zinc-Ribbon DN399_16480 PF03831 PhnA domain DN399_16485 PF01740 STAS domain DN399_16485 PF00916 Sulfate permease family DN399_16530 PF03960 ArsC family DN399_16535 PF01638 HxlR-like helix-turn-helix DN399_16540 PF00392 Bacterial regulatory proteins, gntR family DN399_16540 PF07702 UTRA domain DN399_16545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN399_16545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN399_16555 PF01638 HxlR-like helix-turn-helix DN399_16560 PF01638 HxlR-like helix-turn-helix DN399_16565 PF00248 Aldo/keto reductase family DN399_16605 PF02567 Phenazine biosynthesis-like protein DN399_16610 PF00501 AMP-binding enzyme DN399_16610 PF13193 AMP-binding enzyme C-terminal domain DN399_16615 PF02525 Flavodoxin-like fold DN399_16620 PF01638 HxlR-like helix-turn-helix DN399_16625 PF01022 Bacterial regulatory protein, arsR family DN399_16630 PF01522 Polysaccharide deacetylase DN399_16630 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DN399_16635 PF12791 Anti-sigma factor N-terminus DN399_16640 PF04542 Sigma-70 region 2 DN399_16645 PF00535 Glycosyl transferase family 2 DN399_16645 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DN399_16655 PF00440 Bacterial regulatory proteins, tetR family DN399_16655 PF13977 BetI-type transcriptional repressor, C-terminal DN399_16660 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN399_16685 PF01810 LysE type translocator DN399_16705 PF01061 ABC-2 type transporter DN399_16710 PF13732 Domain of unknown function (DUF4162) DN399_16710 PF00005 ABC transporter DN399_16730 PF03063 Prismane/CO dehydrogenase family DN399_16735 PF00753 Metallo-beta-lactamase superfamily DN399_16790 PF00753 Metallo-beta-lactamase superfamily DN399_16800 PF00324 Amino acid permease DN399_16805 PF07690 Major Facilitator Superfamily DN399_16840 PF02585 GlcNAc-PI de-N-acetylase DN399_16845 PF08830 Protein of unknown function (DUF1806) DN399_16850 PF03600 Citrate transporter DN399_16860 PF00583 Acetyltransferase (GNAT) family DN399_16865 PF01497 Periplasmic binding protein DN399_16870 PF01032 FecCD transport family DN399_16875 PF01032 FecCD transport family DN399_16880 PF05675 Protein of unknown function (DUF817) DN399_16885 PF13170 Protein of unknown function (DUF4003) DN399_16900 PF13302 Acetyltransferase (GNAT) domain DN399_16905 PF10901 Protein of unknown function (DUF2690) DN399_16915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_16915 PF03466 LysR substrate binding domain DN399_16920 PF00107 Zinc-binding dehydrogenase DN399_16920 PF08240 Alcohol dehydrogenase GroES-like domain DN399_16935 PF01713 Smr domain DN399_16935 PF00488 MutS domain V DN399_16940 PF09154 Domain of unknown function (DUF1939) DN399_16940 PF00128 Alpha amylase, catalytic domain DN399_16945 PF00797 N-acetyltransferase DN399_16950 PF08439 Oligopeptidase F DN399_16950 PF01432 Peptidase family M3 DN399_16955 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN399_16960 PF07969 Amidohydrolase family DN399_16975 PF01062 Bestrophin, RFP-TM, chloride channel DN399_16980 PF06146 Phosphate-starvation-inducible E DN399_16985 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN399_16995 PF00144 Beta-lactamase DN399_17010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_17010 PF03466 LysR substrate binding domain DN399_17020 PF03009 Glycerophosphoryl diester phosphodiesterase family DN399_17025 PF01494 FAD binding domain DN399_17030 PF01022 Bacterial regulatory protein, arsR family DN399_17035 PF00107 Zinc-binding dehydrogenase DN399_17035 PF08240 Alcohol dehydrogenase GroES-like domain DN399_17040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DN399_17045 PF18801 response regulator aspartate phosphatase H, N terminal DN399_17060 PF02913 FAD linked oxidases, C-terminal domain DN399_17060 PF01565 FAD binding domain DN399_17085 PF01066 CDP-alcohol phosphatidyltransferase DN399_17095 PF00581 Rhodanese-like domain DN399_17095 PF00753 Metallo-beta-lactamase superfamily DN399_17100 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_17110 PF00483 Nucleotidyl transferase DN399_17120 PF01370 NAD dependent epimerase/dehydratase family DN399_17125 PF16363 GDP-mannose 4,6 dehydratase DN399_17130 PF12323 Helix-turn-helix domain DN399_17130 PF07282 Putative transposase DNA-binding domain DN399_17130 PF01385 Probable transposase DN399_17135 PF18801 response regulator aspartate phosphatase H, N terminal DN399_17140 PF02743 Cache domain DN399_17140 PF00672 HAMP domain DN399_17140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_17165 PF00440 Bacterial regulatory proteins, tetR family DN399_17170 PF07968 Leukocidin/Hemolysin toxin family DN399_17175 PF01520 N-acetylmuramoyl-L-alanine amidase DN399_17175 PF00395 S-layer homology domain DN399_17200 PF00989 PAS fold DN399_17200 PF00512 His Kinase A (phospho-acceptor) domain DN399_17200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_17205 PF01752 Collagenase DN399_17205 PF18496 Collagenase G catalytic helper subdomain DN399_17205 PF08453 Peptidase family M9 N-terminal DN399_17210 PF02308 MgtC family DN399_17220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_17225 PF04294 VanW like protein DN399_17235 PF13039 Protein of unknown function (DUF3900) DN399_17235 PF13037 Domain of unknown function (DUF3898) DN399_17250 PF00313 'Cold-shock' DNA-binding domain DN399_17260 PF00258 Flavodoxin DN399_17270 PF00293 NUDIX domain DN399_17280 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_17290 PF00106 short chain dehydrogenase DN399_17300 PF14698 Argininosuccinate lyase C-terminal DN399_17300 PF00206 Lyase DN399_17310 PF01156 Inosine-uridine preferring nucleoside hydrolase DN399_17315 PF00474 Sodium:solute symporter family DN399_17325 PF00171 Aldehyde dehydrogenase family DN399_17335 PF14151 YfhD-like protein DN399_17340 PF13249 Squalene-hopene cyclase N-terminal domain DN399_17340 PF13243 Squalene-hopene cyclase C-terminal domain DN399_17345 PF02681 Divergent PAP2 family DN399_17350 PF00892 EamA-like transporter family DN399_17355 PF06961 Protein of unknown function (DUF1294) DN399_17370 PF10609 NUBPL iron-transfer P-loop NTPase DN399_17380 PF02391 MoaE protein DN399_17385 PF03454 MoeA C-terminal region (domain IV) DN399_17385 PF00994 Probable molybdopterin binding domain DN399_17385 PF03453 MoeA N-terminal region (domain I and II) DN399_17390 PF00899 ThiF family DN399_17395 PF01226 Formate/nitrite transporter DN399_17400 PF06463 Molybdenum Cofactor Synthesis C DN399_17400 PF04055 Radical SAM superfamily DN399_17405 PF02634 FdhD/NarQ family DN399_17410 PF10057 Uncharacterized conserved protein (DUF2294) DN399_17415 PF07849 Protein of unknown function (DUF1641) DN399_17420 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN399_17420 PF01568 Molydopterin dinucleotide binding domain DN399_17420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN399_17420 PF00384 Molybdopterin oxidoreductase DN399_17420 PF00037 4Fe-4S binding domain DN399_17425 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_17440 PF13520 Amino acid permease DN399_17475 PF08241 Methyltransferase domain DN399_17480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_17485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_17490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_17495 PF00375 Sodium:dicarboxylate symporter family DN399_17500 PF03816 Cell envelope-related transcriptional attenuator domain DN399_17510 PF04542 Sigma-70 region 2 DN399_17510 PF08281 Sigma-70, region 4 DN399_17520 PF00005 ABC transporter DN399_17520 PF13732 Domain of unknown function (DUF4162) DN399_17530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN399_17530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN399_17535 PF03989 DNA gyrase C-terminal domain, beta-propeller DN399_17535 PF00521 DNA gyrase/topoisomerase IV, subunit A DN399_17540 PF01751 Toprim domain DN399_17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_17540 PF00986 DNA gyrase B subunit, carboxyl terminus DN399_17540 PF00204 DNA gyrase B DN399_17545 PF13380 CoA binding domain DN399_17550 PF13180 PDZ domain DN399_17555 PF00072 Response regulator receiver domain DN399_17555 PF00486 Transcriptional regulatory protein, C terminal DN399_17560 PF04055 Radical SAM superfamily DN399_17565 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN399_17565 PF03477 ATP cone domain DN399_17570 PF02660 Glycerol-3-phosphate acyltransferase DN399_17575 PF01521 Iron-sulphur cluster biosynthesis DN399_17580 PF03061 Thioesterase superfamily DN399_17585 PF00704 Glycosyl hydrolases family 18 DN399_17585 PF01476 LysM domain DN399_17595 PF08177 Small acid-soluble spore protein N family DN399_17600 PF13040 Fur-regulated basic protein B DN399_17605 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN399_17605 PF11490 DNA polymerase III polC-type N-terminus II DN399_17605 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN399_17605 PF02811 PHP domain DN399_17605 PF14579 Helix-hairpin-helix motif DN399_17605 PF01336 OB-fold nucleic acid binding domain DN399_17605 PF00929 Exonuclease DN399_17610 PF00578 AhpC/TSA family DN399_17620 PF00005 ABC transporter DN399_17620 PF00664 ABC transporter transmembrane region DN399_17620 PF03412 Peptidase C39 family DN399_17625 PF00694 Aconitase C-terminal domain DN399_17625 PF00330 Aconitase family (aconitate hydratase) DN399_17635 PF01522 Polysaccharide deacetylase DN399_17645 PF08179 Small acid-soluble spore protein P family DN399_17655 PF07690 Major Facilitator Superfamily DN399_17665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN399_17665 PF01411 tRNA synthetases class II (A) DN399_17665 PF02272 DHHA1 domain DN399_17670 PF00293 NUDIX domain DN399_17670 PF13344 Haloacid dehalogenase-like hydrolase DN399_17680 PF02803 Thiolase, C-terminal domain DN399_17680 PF00108 Thiolase, N-terminal domain DN399_17685 PF13193 AMP-binding enzyme C-terminal domain DN399_17685 PF00501 AMP-binding enzyme DN399_17690 PF02632 BioY family DN399_17695 PF00501 AMP-binding enzyme DN399_17695 PF13193 AMP-binding enzyme C-terminal domain DN399_17720 PF05532 CsbD-like DN399_17725 PF03824 High-affinity nickel-transport protein DN399_17730 PF02293 AmiS/UreI family transporter DN399_17735 PF01774 UreD urease accessory protein DN399_17740 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN399_17745 PF01730 UreF DN399_17750 PF02814 UreE urease accessory protein, N-terminal domain DN399_17750 PF05194 UreE urease accessory protein, C-terminal domain DN399_17755 PF00449 Urease alpha-subunit, N-terminal domain DN399_17755 PF01979 Amidohydrolase family DN399_17760 PF00699 Urease beta subunit DN399_17765 PF00547 Urease, gamma subunit DN399_17785 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_17785 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_17800 PF00989 PAS fold DN399_17800 PF00512 His Kinase A (phospho-acceptor) domain DN399_17800 PF13188 PAS domain DN399_17800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_17800 PF13426 PAS domain DN399_17805 PF01738 Dienelactone hydrolase family DN399_17810 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_17815 PF00474 Sodium:solute symporter family DN399_17825 PF01645 Conserved region in glutamate synthase DN399_17830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN399_17835 PF02559 CarD-like/TRCF domain DN399_17840 PF00491 Arginase family DN399_17845 PF01979 Amidohydrolase family DN399_17850 PF17391 Urocanase N-terminal domain DN399_17850 PF01175 Urocanase Rossmann-like domain DN399_17850 PF17392 Urocanase C-terminal domain DN399_17855 PF00221 Aromatic amino acid lyase DN399_17860 PF09021 HutP DN399_17890 PF11084 Protein of unknown function (DUF2621) DN399_17895 PF07301 Protein of unknown function (DUF1453) DN399_17900 PF02683 Cytochrome C biogenesis protein transmembrane region DN399_17925 PF00005 ABC transporter DN399_17940 PF03466 LysR substrate binding domain DN399_17940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_17945 PF03788 LrgA family DN399_17950 PF04172 LrgB-like family DN399_17955 PF00293 NUDIX domain DN399_17955 PF13344 Haloacid dehalogenase-like hydrolase DN399_17965 PF01925 Sulfite exporter TauE/SafE DN399_17985 PF08239 Bacterial SH3 domain DN399_17985 PF01183 Glycosyl hydrolases family 25 DN399_17990 PF00005 ABC transporter DN399_17990 PF00664 ABC transporter transmembrane region DN399_17995 PF00664 ABC transporter transmembrane region DN399_17995 PF00005 ABC transporter DN399_18000 PF03672 Uncharacterised protein family (UPF0154) DN399_18005 PF10747 Sporulation inhibitor of replication protein SirA DN399_18010 PF02779 Transketolase, pyrimidine binding domain DN399_18010 PF02780 Transketolase, C-terminal domain DN399_18010 PF00456 Transketolase, thiamine diphosphate binding domain DN399_18015 PF00528 Binding-protein-dependent transport system inner membrane component DN399_18020 PF00528 Binding-protein-dependent transport system inner membrane component DN399_18025 PF00005 ABC transporter DN399_18030 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN399_18035 PF00149 Calcineurin-like phosphoesterase DN399_18035 PF02872 5'-nucleotidase, C-terminal domain DN399_18040 PF05979 Bacterial protein of unknown function (DUF896) DN399_18045 PF00239 Resolvase, N terminal domain DN399_18050 PF01726 LexA DNA binding domain DN399_18050 PF00717 Peptidase S24-like DN399_18065 PF03551 Transcriptional regulator PadR-like family DN399_18075 PF01471 Putative peptidoglycan binding domain DN399_18075 PF01510 N-acetylmuramoyl-L-alanine amidase DN399_18075 PF01476 LysM domain DN399_18080 PF04225 Opacity-associated protein A LysM-like domain DN399_18080 PF01551 Peptidase family M23 DN399_18115 PF01726 LexA DNA binding domain DN399_18115 PF00717 Peptidase S24-like DN399_18120 PF03951 Glutamine synthetase, beta-Grasp domain DN399_18120 PF00120 Glutamine synthetase, catalytic domain DN399_18125 PF13411 MerR HTH family regulatory protein DN399_18130 PF06838 Methionine gamma-lyase DN399_18135 PF13167 GTP-binding GTPase N-terminal DN399_18135 PF16360 GTP-binding GTPase Middle Region DN399_18135 PF01926 50S ribosome-binding GTPase DN399_18140 PF03458 UPF0126 domain DN399_18145 PF00004 ATPase family associated with various cellular activities (AAA) DN399_18145 PF17866 AAA lid domain DN399_18160 PF17209 Hfq protein DN399_18175 PF01476 LysM domain DN399_18175 PF06725 3D domain DN399_18180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN399_18180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN399_18185 PF00294 pfkB family carbohydrate kinase DN399_18190 PF08220 DeoR-like helix-turn-helix domain DN399_18190 PF00455 DeoR C terminal sensor domain DN399_18195 PF00465 Iron-containing alcohol dehydrogenase DN399_18200 PF04238 Protein of unknown function (DUF420) DN399_18210 PF00324 Amino acid permease DN399_18220 PF00041 Fibronectin type III domain DN399_18220 PF00704 Glycosyl hydrolases family 18 DN399_18225 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN399_18225 PF00149 Calcineurin-like phosphoesterase DN399_18230 PF01226 Formate/nitrite transporter DN399_18235 PF00216 Bacterial DNA-binding protein DN399_18245 PF00403 Heavy-metal-associated domain DN399_18250 PF00403 Heavy-metal-associated domain DN399_18255 PF02583 Metal-sensitive transcriptional repressor DN399_18265 PF00756 Putative esterase DN399_18270 PF00005 ABC transporter DN399_18275 PF01032 FecCD transport family DN399_18280 PF01032 FecCD transport family DN399_18285 PF01497 Periplasmic binding protein DN399_18300 PF02805 Metal binding domain of Ada DN399_18300 PF12833 Helix-turn-helix domain DN399_18305 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN399_18305 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN399_18310 PF00730 HhH-GPD superfamily base excision DNA repair protein DN399_18310 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DN399_18315 PF01546 Peptidase family M20/M25/M40 DN399_18315 PF07687 Peptidase dimerisation domain DN399_18335 PF00561 alpha/beta hydrolase fold DN399_18340 PF00563 EAL domain DN399_18340 PF00990 Diguanylate cyclase, GGDEF domain DN399_18340 PF03707 Bacterial signalling protein N terminal repeat DN399_18345 PF03033 Glycosyltransferase family 28 N-terminal domain DN399_18345 PF04101 Glycosyltransferase family 28 C-terminal domain DN399_18355 PF16363 GDP-mannose 4,6 dehydratase DN399_18360 PF02719 Polysaccharide biosynthesis protein DN399_18360 PF08485 Polysaccharide biosynthesis protein C-terminal DN399_18375 PF10787 Uncharacterised protein from bacillus cereus group DN399_18380 PF04172 LrgB-like family DN399_18385 PF03788 LrgA family DN399_18390 PF00392 Bacterial regulatory proteins, gntR family DN399_18390 PF00155 Aminotransferase class I and II DN399_18395 PF00561 alpha/beta hydrolase fold DN399_18400 PF02585 GlcNAc-PI de-N-acetylase DN399_18410 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN399_18415 PF00082 Subtilase family DN399_18420 PF07486 Cell Wall Hydrolase DN399_18435 PF00884 Sulfatase DN399_18440 PF00350 Dynamin family DN399_18450 PF08676 MutL C terminal dimerisation domain DN399_18450 PF01119 DNA mismatch repair protein, C-terminal domain DN399_18455 PF00488 MutS domain V DN399_18455 PF01624 MutS domain I DN399_18455 PF05188 MutS domain II DN399_18455 PF05190 MutS family domain IV DN399_18455 PF05192 MutS domain III DN399_18460 PF10628 Outer spore coat protein E (CotE) DN399_18465 PF06133 Control of competence regulator ComK, YlbF/YmcA DN399_18470 PF04055 Radical SAM superfamily DN399_18470 PF01938 TRAM domain DN399_18470 PF00919 Uncharacterized protein family UPF0004 DN399_18475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN399_18480 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN399_18480 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN399_18480 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN399_18485 PF01244 Membrane dipeptidase (Peptidase family M19) DN399_18490 PF04232 Stage V sporulation protein S (SpoVS) DN399_18495 PF13277 YmdB-like protein DN399_18500 PF12072 Domain of unknown function (DUF3552) DN399_18500 PF00013 KH domain DN399_18500 PF01966 HD domain DN399_18505 PF00154 recA bacterial DNA recombination protein DN399_18510 PF02464 Competence-damaged protein DN399_18510 PF00994 Probable molybdopterin binding domain DN399_18510 PF18146 Damage-inducible protein CinA KH domain DN399_18515 PF01066 CDP-alcohol phosphatidyltransferase DN399_18520 PF13464 Domain of unknown function (DUF4115) DN399_18525 PF11868 Protein of unknown function (DUF3388) DN399_18530 PF11588 Protein of unknown function (DUF3243) DN399_18540 PF05193 Peptidase M16 inactive domain DN399_18540 PF00675 Insulinase (Peptidase family M16) DN399_18545 PF05193 Peptidase M16 inactive domain DN399_18570 PF00392 Bacterial regulatory proteins, gntR family DN399_18570 PF07702 UTRA domain DN399_18580 PF17854 FtsK alpha domain DN399_18580 PF09397 Ftsk gamma domain DN399_18580 PF01580 FtsK/SpoIIIE family DN399_18585 PF14035 YlzJ-like protein DN399_18590 PF00574 Clp protease DN399_18595 PF17770 Ribonuclease J C-terminal domain DN399_18595 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN399_18595 PF00753 Metallo-beta-lactamase superfamily DN399_18600 PF00701 Dihydrodipicolinate synthetase family DN399_18605 PF00696 Amino acid kinase family DN399_18605 PF13840 ACT domain DN399_18610 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN399_18610 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN399_18615 PF02441 Flavoprotein DN399_18620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN399_18620 PF16924 Dipicolinate synthase subunit A N-terminal domain DN399_18625 PF05239 PRC-barrel domain DN399_18630 PF00675 Insulinase (Peptidase family M16) DN399_18630 PF05193 Peptidase M16 inactive domain DN399_18635 PF01522 Polysaccharide deacetylase DN399_18640 PF00013 KH domain DN399_18640 PF01138 3' exoribonuclease family, domain 1 DN399_18640 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DN399_18640 PF00575 S1 RNA binding domain DN399_18640 PF03725 3' exoribonuclease family, domain 2 DN399_18645 PF00312 Ribosomal protein S15 DN399_18650 PF06574 FAD synthetase DN399_18650 PF01687 Riboflavin kinase DN399_18655 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN399_18655 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN399_18660 PF02033 Ribosome-binding factor A DN399_18665 PF04456 Protein of unknown function (DUF503) DN399_18670 PF00009 Elongation factor Tu GTP binding domain DN399_18670 PF11987 Translation-initiation factor 2 DN399_18670 PF04760 Translation initiation factor IF-2, N-terminal region DN399_18675 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN399_18680 PF04296 Protein of unknown function (DUF448) DN399_18685 PF08529 NusA N-terminal domain DN399_18685 PF00575 S1 RNA binding domain DN399_18685 PF13184 NusA-like KH domain DN399_18690 PF17384 RimP C-terminal SH3 domain DN399_18690 PF02576 RimP N-terminal domain DN399_18695 PF11490 DNA polymerase III polC-type N-terminus II DN399_18695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN399_18695 PF14480 DNA polymerase III polC-type N-terminus I DN399_18695 PF14579 Helix-hairpin-helix motif DN399_18695 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN399_18695 PF00929 Exonuclease DN399_18695 PF02811 PHP domain DN399_18700 PF04073 Aminoacyl-tRNA editing domain DN399_18700 PF03129 Anticodon binding domain DN399_18700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN399_18705 PF02163 Peptidase family M50 DN399_18705 PF17820 PDZ domain DN399_18710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN399_18710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN399_18710 PF13288 DXP reductoisomerase C-terminal domain DN399_18720 PF01255 Putative undecaprenyl diphosphate synthase DN399_18725 PF01765 Ribosome recycling factor DN399_18730 PF00696 Amino acid kinase family DN399_18735 PF00889 Elongation factor TS DN399_18740 PF00318 Ribosomal protein S2 DN399_18745 PF08222 CodY helix-turn-helix domain DN399_18745 PF06018 CodY GAF-like domain DN399_18750 PF07724 AAA domain (Cdc48 subfamily) DN399_18750 PF00004 ATPase family associated with various cellular activities (AAA) DN399_18750 PF10431 C-terminal, D2-small domain, of ClpB protein DN399_18755 PF00227 Proteasome subunit DN399_18760 PF02899 Phage integrase, N-terminal SAM-like domain DN399_18760 PF00589 Phage integrase family DN399_18765 PF01134 Glucose inhibited division protein A DN399_18770 PF01131 DNA topoisomerase DN399_18770 PF01751 Toprim domain DN399_18770 PF01396 Topoisomerase DNA binding C4 zinc finger DN399_18775 PF02481 DNA recombination-mediator protein A DN399_18780 PF02629 CoA binding domain DN399_18780 PF00549 CoA-ligase DN399_18785 PF00549 CoA-ligase DN399_18785 PF08442 ATP-grasp domain DN399_18790 PF01351 Ribonuclease HII DN399_18795 PF01926 50S ribosome-binding GTPase DN399_18800 PF10502 Signal peptidase, peptidase S26 DN399_18805 PF01245 Ribosomal protein L19 DN399_18810 PF01746 tRNA (Guanine-1)-methyltransferase DN399_18815 PF01782 RimM N-terminal domain DN399_18815 PF05239 PRC-barrel domain DN399_18825 PF00886 Ribosomal protein S16 DN399_18830 PF02881 SRP54-type protein, helical bundle domain DN399_18830 PF00448 SRP54-type protein, GTPase domain DN399_18830 PF02978 Signal peptide binding domain DN399_18835 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DN399_18840 PF00448 SRP54-type protein, GTPase domain DN399_18840 PF02881 SRP54-type protein, helical bundle domain DN399_18845 PF06470 SMC proteins Flexible Hinge Domain DN399_18845 PF02463 RecF/RecN/SMC N terminal domain DN399_18850 PF00035 Double-stranded RNA binding motif DN399_18850 PF14622 Ribonuclease-III-like DN399_18855 PF00550 Phosphopantetheine attachment site DN399_18865 PF00698 Acyl transferase domain DN399_18870 PF02504 Fatty acid synthesis protein DN399_18875 PF03061 Thioesterase superfamily DN399_18880 PF00270 DEAD/DEAH box helicase DN399_18880 PF00271 Helicase conserved C-terminal domain DN399_18880 PF17191 RecG wedge domain DN399_18885 PF13684 Dihydroxyacetone kinase family DN399_18885 PF02734 DAK2 domain DN399_18890 PF03780 Asp23 family, cell envelope-related function DN399_18895 PF00830 Ribosomal L28 family DN399_18900 PF08183 Stage V sporulation protein family DN399_18905 PF04263 Thiamin pyrophosphokinase, catalytic domain DN399_18905 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DN399_18910 PF00834 Ribulose-phosphate 3 epimerase family DN399_18915 PF03193 RsgA GTPase DN399_18915 PF16745 RsgA N-terminal domain DN399_18920 PF03793 PASTA domain DN399_18920 PF00069 Protein kinase domain DN399_18930 PF04055 Radical SAM superfamily DN399_18935 PF01029 NusB family DN399_18935 PF01189 16S rRNA methyltransferase RsmB/F DN399_18940 PF00551 Formyl transferase DN399_18940 PF02911 Formyl transferase, C-terminal domain DN399_18945 PF01327 Polypeptide deformylase DN399_18950 PF17764 3′ DNA-binding domain (3′BD) DN399_18950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN399_18950 PF04851 Type III restriction enzyme, res subunit DN399_18950 PF00271 Helicase conserved C-terminal domain DN399_18950 PF18074 Primosomal protein N C-terminal domain DN399_18955 PF04127 DNA / pantothenate metabolism flavoprotein DN399_18955 PF02441 Flavoprotein DN399_18960 PF01192 RNA polymerase Rpb6 DN399_18965 PF00625 Guanylate kinase DN399_18970 PF04025 Domain of unknown function (DUF370) DN399_18975 PF08340 Domain of unknown function (DUF1732) DN399_18975 PF03755 YicC-like family, N-terminal region DN399_18980 PF00689 Cation transporting ATPase, C-terminus DN399_18980 PF00690 Cation transporter/ATPase, N-terminus DN399_18990 PF00557 Metallopeptidase family M24 DN399_18990 PF01321 Creatinase/Prolidase N-terminal domain DN399_19015 PF00156 Phosphoribosyl transferase domain DN399_19020 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN399_19025 PF01180 Dihydroorotate dehydrogenase DN399_19030 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN399_19035 PF02142 MGS-like domain DN399_19035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN399_19035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN399_19040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN399_19040 PF00117 Glutamine amidotransferase class-I DN399_19045 PF01979 Amidohydrolase family DN399_19050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN399_19050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN399_19055 PF00860 Permease family DN399_19060 PF00156 Phosphoribosyl transferase domain DN399_19065 PF00849 RNA pseudouridylate synthase DN399_19065 PF01479 S4 domain DN399_19070 PF01252 Signal peptidase (SPase) II DN399_19080 PF08264 Anticodon-binding domain of tRNA DN399_19080 PF00133 tRNA synthetases class I (I, L, M and V) DN399_19080 PF06827 Zinc finger found in FPG and IleRS DN399_19085 PF05103 DivIVA protein DN399_19090 PF01479 S4 domain DN399_19090 PF17774 Putative RNA-binding domain in YlmH DN399_19095 PF02325 YGGT family DN399_19100 PF04472 Cell division protein SepF DN399_19105 PF01168 Alanine racemase, N-terminal domain DN399_19115 PF05239 PRC-barrel domain DN399_19120 PF04542 Sigma-70 region 2 DN399_19120 PF04539 Sigma-70 region 3 DN399_19120 PF04545 Sigma-70, region 4 DN399_19125 PF04542 Sigma-70 region 2 DN399_19125 PF04545 Sigma-70, region 4 DN399_19130 PF03419 Sporulation factor SpoIIGA DN399_19135 PF00091 Tubulin/FtsZ family, GTPase domain DN399_19135 PF12327 FtsZ family, C-terminal domain DN399_19140 PF02491 SHS2 domain inserted in FTSA DN399_19145 PF03799 Cell division protein FtsQ DN399_19145 PF08478 POTRA domain, FtsQ-type DN399_19150 PF01565 FAD binding domain DN399_19150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN399_19155 PF03033 Glycosyltransferase family 28 N-terminal domain DN399_19155 PF04101 Glycosyltransferase family 28 C-terminal domain DN399_19160 PF01098 Cell cycle protein DN399_19165 PF08245 Mur ligase middle domain DN399_19165 PF02875 Mur ligase family, glutamate ligase domain DN399_19170 PF00953 Glycosyl transferase family 4 DN399_19170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DN399_19175 PF01225 Mur ligase family, catalytic domain DN399_19175 PF02875 Mur ligase family, glutamate ligase domain DN399_19175 PF08245 Mur ligase middle domain DN399_19180 PF03793 PASTA domain DN399_19180 PF00905 Penicillin binding protein transpeptidase domain DN399_19180 PF03717 Penicillin-binding Protein dimerisation domain DN399_19190 PF04977 Septum formation initiator DN399_19195 PF01795 MraW methylase family DN399_19200 PF10079 Bacillithiol biosynthesis BshC DN399_19205 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN399_19205 PF02558 Ketopantoate reductase PanE/ApbA DN399_19210 PF00583 Acetyltransferase (GNAT) family DN399_19220 PF01783 Ribosomal L32p protein family DN399_19225 PF02620 Large ribosomal RNA subunit accumulation protein YceD DN399_19230 PF05636 HIGH Nucleotidyl Transferase DN399_19235 PF13180 PDZ domain DN399_19235 PF05362 Lon protease (S16) C-terminal proteolytic domain DN399_19240 PF01734 Patatin-like phospholipase DN399_19245 PF07670 Nucleoside recognition DN399_19250 PF01467 Cytidylyltransferase-like DN399_19265 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DN399_19270 PF06133 Control of competence regulator ComK, YlbF/YmcA DN399_19275 PF00300 Histidine phosphatase superfamily (branch 1) DN399_19280 PF14003 YlbE-like protein DN399_19285 PF14071 Putative coat protein DN399_19290 PF14504 CAP-associated N-terminal DN399_19290 PF00188 Cysteine-rich secretory protein family DN399_19295 PF08868 YugN-like family DN399_19300 PF00795 Carbon-nitrogen hydrolase DN399_19305 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DN399_19310 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DN399_19315 PF00510 Cytochrome c oxidase subunit III DN399_19320 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN399_19325 PF00034 Cytochrome c DN399_19325 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DN399_19325 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN399_19330 PF01040 UbiA prenyltransferase family DN399_19335 PF02628 Cytochrome oxidase assembly protein DN399_19340 PF02436 Conserved carboxylase domain DN399_19340 PF00682 HMGL-like DN399_19340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN399_19340 PF00364 Biotin-requiring enzyme DN399_19340 PF02785 Biotin carboxylase C-terminal domain DN399_19340 PF00289 Biotin carboxylase, N-terminal domain DN399_19350 PF01098 Cell cycle protein DN399_19355 PF07408 Protein of unknown function (DUF1507) DN399_19365 PF13638 PIN domain DN399_19365 PF02562 PhoH-like protein DN399_19375 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DN399_19385 PF14036 YlaH-like protein DN399_19400 PF00459 Inositol monophosphatase family DN399_19410 PF06335 Protein of unknown function (DUF1054) DN399_19415 PF05256 Uncharacterised protein family (UPF0223) DN399_19420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN399_19420 PF01276 Orn/Lys/Arg decarboxylase, major domain DN399_19460 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_19460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN399_19465 PF02817 e3 binding domain DN399_19465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN399_19465 PF00364 Biotin-requiring enzyme DN399_19470 PF02780 Transketolase, C-terminal domain DN399_19470 PF02779 Transketolase, pyrimidine binding domain DN399_19475 PF00676 Dehydrogenase E1 component DN399_19485 PF01327 Polypeptide deformylase DN399_19505 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN399_19505 PF00753 Metallo-beta-lactamase superfamily DN399_19505 PF17770 Ribonuclease J C-terminal domain DN399_19510 PF02080 TrkA-C domain DN399_19510 PF02254 TrkA-N domain DN399_19520 PF07687 Peptidase dimerisation domain DN399_19520 PF01546 Peptidase family M20/M25/M40 DN399_19525 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DN399_19525 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_19525 PF14602 Hexapeptide repeat of succinyl-transferase DN399_19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_19530 PF03466 LysR substrate binding domain DN399_19545 PF04308 Ribonuclease H-like DN399_19550 PF08796 Protein of unknown function (DUF1797) DN399_19565 PF00563 EAL domain DN399_19565 PF10388 EAL-domain associated signalling protein domain DN399_19575 PF00149 Calcineurin-like phosphoesterase DN399_19575 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN399_19585 PF13089 Polyphosphate kinase N-terminal domain DN399_19585 PF13090 Polyphosphate kinase C-terminal domain 2 DN399_19585 PF17941 Polyphosphate kinase C-terminal domain 1 DN399_19585 PF02503 Polyphosphate kinase middle domain DN399_19590 PF02541 Ppx/GppA phosphatase family DN399_19595 PF14177 YkyB-like protein DN399_19620 PF07690 Major Facilitator Superfamily DN399_19630 PF08267 Cobalamin-independent synthase, N-terminal domain DN399_19630 PF01717 Cobalamin-independent synthase, Catalytic domain DN399_19640 PF14040 Deoxyribonuclease NucA/NucB DN399_19650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_19650 PF00512 His Kinase A (phospho-acceptor) domain DN399_19660 PF00155 Aminotransferase class I and II DN399_19665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN399_19665 PF00356 Bacterial regulatory proteins, lacI family DN399_19670 PF00528 Binding-protein-dependent transport system inner membrane component DN399_19675 PF00528 Binding-protein-dependent transport system inner membrane component DN399_19680 PF13416 Bacterial extracellular solute-binding protein DN399_19685 PF02903 Alpha amylase, N-terminal ig-like domain DN399_19685 PF00128 Alpha amylase, catalytic domain DN399_19685 PF16657 Maltogenic Amylase, C-terminal domain DN399_19690 PF16657 Maltogenic Amylase, C-terminal domain DN399_19690 PF00128 Alpha amylase, catalytic domain DN399_19695 PF00005 ABC transporter DN399_19695 PF17912 MalK OB fold domain DN399_19695 PF03459 TOBE domain DN399_19735 PF02803 Thiolase, C-terminal domain DN399_19735 PF00108 Thiolase, N-terminal domain DN399_19740 PF00293 NUDIX domain DN399_19770 PF03551 Transcriptional regulator PadR-like family DN399_19790 PF01636 Phosphotransferase enzyme family DN399_19795 PF00795 Carbon-nitrogen hydrolase DN399_19800 PF00155 Aminotransferase class I and II DN399_19805 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DN399_19805 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DN399_19815 PF00596 Class II Aldolase and Adducin N-terminal domain DN399_19820 PF03079 ARD/ARD' family DN399_19835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN399_19835 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN399_19840 PF00144 Beta-lactamase DN399_19845 PF00990 Diguanylate cyclase, GGDEF domain DN399_19850 PF00881 Nitroreductase family DN399_19865 PF02896 PEP-utilising enzyme, TIM barrel domain DN399_19865 PF00391 PEP-utilising enzyme, mobile domain DN399_19865 PF05524 PEP-utilising enzyme, N-terminal DN399_19870 PF00381 PTS HPr component phosphorylation site DN399_19875 PF02378 Phosphotransferase system, EIIC DN399_19875 PF00367 phosphotransferase system, EIIB DN399_19875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN399_19880 PF03123 CAT RNA binding domain DN399_19880 PF00874 PRD domain DN399_19895 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DN399_19900 PF01979 Amidohydrolase family DN399_19910 PF04079 Segregation and condensation complex subunit ScpB DN399_19920 PF02616 Segregation and condensation protein ScpA DN399_19930 PF03745 Domain of unknown function (DUF309) DN399_19935 PF00583 Acetyltransferase (GNAT) family DN399_19940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN399_19945 PF06207 Protein of unknown function (DUF1002) DN399_19955 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_19960 PF14097 Stage V sporulation protein AE1 DN399_19965 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN399_19970 PF07451 Stage V sporulation protein AD (SpoVAD) DN399_19975 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN399_19980 PF13782 Stage V sporulation protein AB DN399_19985 PF12164 Stage V sporulation protein AA DN399_19995 PF00209 Sodium:neurotransmitter symporter family DN399_20000 PF04539 Sigma-70 region 3 DN399_20000 PF04545 Sigma-70, region 4 DN399_20000 PF04542 Sigma-70 region 2 DN399_20005 PF13581 Histidine kinase-like ATPase domain DN399_20010 PF01740 STAS domain DN399_20015 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_20015 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_20025 PF00392 Bacterial regulatory proteins, gntR family DN399_20030 PF00005 ABC transporter DN399_20050 PF01047 MarR family DN399_20060 PF00860 Permease family DN399_20065 PF01544 CorA-like Mg2+ transporter protein DN399_20070 PF02885 Glycosyl transferase family, helical bundle domain DN399_20070 PF00591 Glycosyl transferase family, a/b domain DN399_20070 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN399_20075 PF01048 Phosphorylase superfamily DN399_20080 PF01676 Metalloenzyme superfamily DN399_20085 PF13115 YtkA-like DN399_20090 PF00589 Phage integrase family DN399_20090 PF02899 Phage integrase, N-terminal SAM-like domain DN399_20095 PF14004 Protein of unknown function (DUF4227) DN399_20100 PF01475 Ferric uptake regulator family DN399_20105 PF01944 Stage II sporulation protein M DN399_20115 PF00293 NUDIX domain DN399_20120 PF13072 Mother cell inhibitor of FtsZ DN399_20125 PF00248 Aldo/keto reductase family DN399_20130 PF00248 Aldo/keto reductase family DN399_20135 PF13673 Acetyltransferase (GNAT) domain DN399_20135 PF04229 GrpB protein DN399_20145 PF02872 5'-nucleotidase, C-terminal domain DN399_20145 PF00746 LPXTG cell wall anchor motif DN399_20145 PF00149 Calcineurin-like phosphoesterase DN399_20145 PF00565 Staphylococcal nuclease homologue DN399_20155 PF12146 Serine aminopeptidase, S33 DN399_20160 PF03553 Na+/H+ antiporter family DN399_20160 PF13726 Na+-H+ antiporter family DN399_20165 PF00356 Bacterial regulatory proteins, lacI family DN399_20170 PF00583 Acetyltransferase (GNAT) family DN399_20175 PF12146 Serine aminopeptidase, S33 DN399_20180 PF10827 Protein of unknown function (DUF2552) DN399_20190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN399_20190 PF01872 RibD C-terminal domain DN399_20195 PF00677 Lumazine binding domain DN399_20200 PF00925 GTP cyclohydrolase II DN399_20200 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DN399_20205 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN399_20215 PF06968 Biotin and Thiamin Synthesis associated domain DN399_20215 PF04055 Radical SAM superfamily DN399_20220 PF13847 Methyltransferase domain DN399_20225 PF08241 Methyltransferase domain DN399_20225 PF12697 Alpha/beta hydrolase family DN399_20230 PF00155 Aminotransferase class I and II DN399_20240 PF00202 Aminotransferase class-III DN399_20255 PF02872 5'-nucleotidase, C-terminal domain DN399_20255 PF00149 Calcineurin-like phosphoesterase DN399_20265 PF01037 Lrp/AsnC ligand binding domain DN399_20265 PF13404 AsnC-type helix-turn-helix domain DN399_20280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN399_20280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN399_20285 PF00202 Aminotransferase class-III DN399_20290 PF00696 Amino acid kinase family DN399_20295 PF01960 ArgJ family DN399_20300 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN399_20300 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN399_20310 PF00106 short chain dehydrogenase DN399_20315 PF00753 Metallo-beta-lactamase superfamily DN399_20320 PF03807 NADP oxidoreductase coenzyme F420-dependent DN399_20320 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN399_20325 PF03313 Serine dehydratase alpha chain DN399_20330 PF01842 ACT domain DN399_20330 PF03315 Serine dehydratase beta chain DN399_20340 PF00753 Metallo-beta-lactamase superfamily DN399_20340 PF12706 Beta-lactamase superfamily domain DN399_20355 PF00689 Cation transporting ATPase, C-terminus DN399_20355 PF00690 Cation transporter/ATPase, N-terminus DN399_20365 PF00817 impB/mucB/samB family DN399_20365 PF11798 IMS family HHH motif DN399_20365 PF11799 impB/mucB/samB family C-terminal domain DN399_20370 PF01546 Peptidase family M20/M25/M40 DN399_20370 PF07687 Peptidase dimerisation domain DN399_20375 PF13302 Acetyltransferase (GNAT) domain DN399_20385 PF03734 L,D-transpeptidase catalytic domain DN399_20390 PF06081 Aromatic acid exporter family member 1 DN399_20390 PF11728 Putative aromatic acid exporter C-terminal domain DN399_20395 PF00005 ABC transporter DN399_20400 PF00528 Binding-protein-dependent transport system inner membrane component DN399_20405 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN399_20410 PF06491 Disulphide isomerase DN399_20415 PF11208 Protein of unknown function (DUF2992) DN399_20420 PF09297 NADH pyrophosphatase zinc ribbon domain DN399_20420 PF00293 NUDIX domain DN399_20425 PF04239 Protein of unknown function (DUF421) DN399_20430 PF01098 Cell cycle protein DN399_20435 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN399_20435 PF00364 Biotin-requiring enzyme DN399_20435 PF02817 e3 binding domain DN399_20440 PF02780 Transketolase, C-terminal domain DN399_20440 PF02779 Transketolase, pyrimidine binding domain DN399_20445 PF00676 Dehydrogenase E1 component DN399_20450 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_20450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN399_20455 PF00871 Acetokinase family DN399_20460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN399_20460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN399_20465 PF01515 Phosphate acetyl/butaryl transferase DN399_20475 PF02954 Bacterial regulatory protein, Fis family DN399_20475 PF00158 Sigma-54 interaction domain DN399_20475 PF00989 PAS fold DN399_20485 PF03009 Glycerophosphoryl diester phosphodiesterase family DN399_20490 PF14174 YycC-like protein DN399_20500 PF08769 Sporulation initiation factor Spo0A C terminal DN399_20500 PF00072 Response regulator receiver domain DN399_20510 PF05580 SpoIVB peptidase S55 DN399_20510 PF17820 PDZ domain DN399_20515 PF13476 AAA domain DN399_20520 PF02863 Arginine repressor, C-terminal domain DN399_20520 PF01316 Arginine repressor, DNA binding domain DN399_20525 PF01479 S4 domain DN399_20525 PF01728 FtsJ-like methyltransferase DN399_20530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN399_20530 PF02779 Transketolase, pyrimidine binding domain DN399_20530 PF02780 Transketolase, C-terminal domain DN399_20535 PF00348 Polyprenyl synthetase DN399_20540 PF02609 Exonuclease VII small subunit DN399_20545 PF02601 Exonuclease VII, large subunit DN399_20545 PF13742 OB-fold nucleic acid binding domain DN399_20550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN399_20550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN399_20555 PF01029 NusB family DN399_20560 PF03780 Asp23 family, cell envelope-related function DN399_20565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN399_20565 PF00289 Biotin carboxylase, N-terminal domain DN399_20565 PF02785 Biotin carboxylase C-terminal domain DN399_20570 PF00364 Biotin-requiring enzyme DN399_20580 PF12685 SpoIIIAH-like protein DN399_20590 PF09581 Stage III sporulation protein AF (Spore_III_AF) DN399_20595 PF09546 Stage III sporulation protein AE (spore_III_AE) DN399_20600 PF06686 Stage III sporulation protein AC/AD protein family DN399_20605 PF06686 Stage III sporulation protein AC/AD protein family DN399_20610 PF09548 Stage III sporulation protein AB (spore_III_AB) DN399_20635 PF01132 Elongation factor P (EF-P) OB domain DN399_20635 PF09285 Elongation factor P, C-terminal DN399_20635 PF08207 Elongation factor P (EF-P) KOW-like domain DN399_20640 PF01321 Creatinase/Prolidase N-terminal domain DN399_20640 PF00557 Metallopeptidase family M24 DN399_20645 PF01220 Dehydroquinase class II DN399_20650 PF11085 Conserved membrane protein YqhR DN399_20655 PF07136 Protein of unknown function (DUF1385) DN399_20665 PF13419 Haloacid dehalogenase-like hydrolase DN399_20670 PF02742 Iron dependent repressor, metal binding and dimerisation domain DN399_20670 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN399_20680 PF03551 Transcriptional regulator PadR-like family DN399_20695 PF03099 Biotin/lipoate A/B protein ligase family DN399_20700 PF00581 Rhodanese-like domain DN399_20710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN399_20710 PF00356 Bacterial regulatory proteins, lacI family DN399_20720 PF00893 Small Multidrug Resistance protein DN399_20725 PF00893 Small Multidrug Resistance protein DN399_20755 PF00005 ABC transporter DN399_20760 PF00392 Bacterial regulatory proteins, gntR family DN399_20775 PF02347 Glycine cleavage system P-protein DN399_20780 PF02347 Glycine cleavage system P-protein DN399_20785 PF02347 Glycine cleavage system P-protein DN399_20790 PF08669 Glycine cleavage T-protein C-terminal barrel domain DN399_20790 PF01571 Aminomethyltransferase folate-binding domain DN399_20795 PF00271 Helicase conserved C-terminal domain DN399_20795 PF00176 SNF2 family N-terminal domain DN399_20800 PF11079 Bacterial protein YqhG of unknown function DN399_20820 PF14038 YqzE-like protein DN399_20825 PF01202 Shikimate kinase DN399_20845 PF00271 Helicase conserved C-terminal domain DN399_20900 PF11117 Protein of unknown function (DUF2626) DN399_20905 PF00375 Sodium:dicarboxylate symporter family DN399_20940 PF04101 Glycosyltransferase family 28 C-terminal domain DN399_20940 PF03033 Glycosyltransferase family 28 N-terminal domain DN399_20945 PF02607 B12 binding domain DN399_20945 PF02574 Homocysteine S-methyltransferase DN399_20945 PF00809 Pterin binding enzyme DN399_20945 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN399_20945 PF02310 B12 binding domain DN399_20950 PF02219 Methylenetetrahydrofolate reductase DN399_20950 PF02574 Homocysteine S-methyltransferase DN399_20955 PF01053 Cys/Met metabolism PLP-dependent enzyme DN399_20960 PF01053 Cys/Met metabolism PLP-dependent enzyme DN399_20970 PF01022 Bacterial regulatory protein, arsR family DN399_20980 PF00753 Metallo-beta-lactamase superfamily DN399_20985 PF10958 Protein of unknown function (DUF2759) DN399_20990 PF00480 ROK family DN399_20995 PF06014 Bacterial protein of unknown function (DUF910) DN399_21000 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN399_21005 PF00471 Ribosomal protein L33 DN399_21010 PF00483 Nucleotidyl transferase DN399_21015 PF01895 PhoU domain DN399_21020 PF00005 ABC transporter DN399_21025 PF00528 Binding-protein-dependent transport system inner membrane component DN399_21030 PF00528 Binding-protein-dependent transport system inner membrane component DN399_21035 PF12849 PBP superfamily domain DN399_21045 PF07690 Major Facilitator Superfamily DN399_21050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN399_21050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN399_21060 PF06691 Protein of unknown function (DUF1189) DN399_21070 PF04551 GcpE protein DN399_21075 PF01475 Ferric uptake regulator family DN399_21080 PF00950 ABC 3 transport family DN399_21085 PF00005 ABC transporter DN399_21090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_21090 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_21095 PF11116 Protein of unknown function (DUF2624) DN399_21100 PF01261 Xylose isomerase-like TIM barrel DN399_21105 PF00270 DEAD/DEAH box helicase DN399_21105 PF00271 Helicase conserved C-terminal domain DN399_21115 PF02401 LytB protein DN399_21120 PF01784 NIF3 (NGG1p interacting factor 3) DN399_21125 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DN399_21130 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN399_21135 PF03979 Sigma-70 factor, region 1.1 DN399_21135 PF00140 Sigma-70 factor, region 1.2 DN399_21135 PF04545 Sigma-70, region 4 DN399_21135 PF04542 Sigma-70 region 2 DN399_21135 PF04539 Sigma-70 region 3 DN399_21140 PF08275 DNA primase catalytic core, N-terminal domain DN399_21140 PF10410 DnaB-helicase binding domain of primase DN399_21140 PF01807 CHC2 zinc finger DN399_21145 PF03618 Kinase/pyrophosphorylase DN399_21150 PF08279 HTH domain DN399_21150 PF00571 CBS domain DN399_21155 PF02565 Recombination protein O C terminal DN399_21155 PF11967 Recombination protein O N terminal DN399_21165 PF07650 KH domain DN399_21165 PF01926 50S ribosome-binding GTPase DN399_21170 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN399_21175 PF01219 Prokaryotic diacylglycerol kinase DN399_21180 PF02130 Uncharacterized protein family UPF0054 DN399_21185 PF01966 HD domain DN399_21185 PF07698 7TM receptor with intracellular HD hydrolase DN399_21185 PF07697 7TM-HD extracellular DN399_21190 PF02562 PhoH-like protein DN399_21195 PF06898 Putative stage IV sporulation protein YqfD DN399_21200 PF07873 YabP family DN399_21210 PF09424 Yqey-like protein DN399_21215 PF01165 Ribosomal protein S21 DN399_21225 PF01938 TRAM domain DN399_21225 PF00919 Uncharacterized protein family UPF0004 DN399_21225 PF04055 Radical SAM superfamily DN399_21230 PF04452 RNA methyltransferase DN399_21240 PF00684 DnaJ central domain DN399_21240 PF01556 DnaJ C terminal domain DN399_21240 PF00226 DnaJ domain DN399_21245 PF00012 Hsp70 protein DN399_21250 PF01025 GrpE DN399_21255 PF01628 HrcA protein C terminal domain DN399_21260 PF06969 HemN C-terminal domain DN399_21260 PF04055 Radical SAM superfamily DN399_21265 PF01638 HxlR-like helix-turn-helix DN399_21270 PF00679 Elongation factor G C-terminus DN399_21270 PF00009 Elongation factor Tu GTP binding domain DN399_21270 PF03144 Elongation factor Tu domain 2 DN399_21270 PF06421 GTP-binding protein LepA C-terminus DN399_21280 PF03418 Germination protease DN399_21285 PF01649 Ribosomal protein S20 DN399_21290 PF06144 DNA polymerase III, delta subunit DN399_21295 PF14141 YqzM-like protein DN399_21300 PF03772 Competence protein DN399_21300 PF13567 Domain of unknown function (DUF4131) DN399_21300 PF00753 Metallo-beta-lactamase superfamily DN399_21305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN399_21310 PF10531 SLBB domain DN399_21315 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN399_21315 PF03807 NADP oxidoreductase coenzyme F420-dependent DN399_21320 PF13649 Methyltransferase domain DN399_21330 PF01966 HD domain DN399_21335 PF01467 Cytidylyltransferase-like DN399_21340 PF01985 CRS1 / YhbY (CRM) domain DN399_21345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DN399_21345 PF08501 Shikimate dehydrogenase substrate binding domain DN399_21345 PF01488 Shikimate / quinate 5-dehydrogenase DN399_21350 PF01926 50S ribosome-binding GTPase DN399_21365 PF02666 Phosphatidylserine decarboxylase DN399_21370 PF04542 Sigma-70 region 2 DN399_21370 PF04545 Sigma-70, region 4 DN399_21385 PF00471 Ribosomal protein L33 DN399_21390 PF00881 Nitroreductase family DN399_21395 PF04607 Region found in RelA / SpoT proteins DN399_21405 PF00245 Alkaline phosphatase DN399_21410 PF00583 Acetyltransferase (GNAT) family DN399_21415 PF00561 alpha/beta hydrolase fold DN399_21415 PF08386 TAP-like protein DN399_21450 PF02225 PA domain DN399_21450 PF05922 Peptidase inhibitor I9 DN399_21450 PF13860 FlgD Ig-like domain DN399_21450 PF00082 Subtilase family DN399_21455 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DN399_21465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN399_21470 PF07681 DoxX DN399_21500 PF00005 ABC transporter DN399_21505 PF01032 FecCD transport family DN399_21510 PF01497 Periplasmic binding protein DN399_21520 PF14143 YrhC-like protein DN399_21525 PF00171 Aldehyde dehydrogenase family DN399_21525 PF00465 Iron-containing alcohol dehydrogenase DN399_21530 PF01053 Cys/Met metabolism PLP-dependent enzyme DN399_21535 PF00291 Pyridoxal-phosphate dependent enzyme DN399_21540 PF01048 Phosphorylase superfamily DN399_21545 PF08241 Methyltransferase domain DN399_21560 PF00905 Penicillin binding protein transpeptidase domain DN399_21560 PF03717 Penicillin-binding Protein dimerisation domain DN399_21570 PF03449 Transcription elongation factor, N-terminal DN399_21570 PF01272 Transcription elongation factor, GreA/GreB, C-term DN399_21575 PF00485 Phosphoribulokinase / Uridine kinase family DN399_21595 PF02618 YceG-like family DN399_21600 PF06949 Protein of unknown function (DUF1292) DN399_21605 PF03652 Holliday junction resolvase DN399_21610 PF06135 IreB regulatory phosphoprotein DN399_21615 PF02272 DHHA1 domain DN399_21615 PF01411 tRNA synthetases class II (A) DN399_21615 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN399_21625 PF01594 AI-2E family transporter DN399_21645 PF14490 Helix-hairpin-helix containing domain DN399_21645 PF13538 UvrD-like helicase C-terminal domain DN399_21645 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN399_21660 PF00266 Aminotransferase class-V DN399_21665 PF02082 Transcriptional regulator DN399_21670 PF16193 AAA C-terminal domain DN399_21670 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN399_21670 PF12002 MgsA AAA+ ATPase C terminal DN399_21690 PF00899 ThiF family DN399_21695 PF00152 tRNA synthetases class II (D, K and N) DN399_21695 PF01336 OB-fold nucleic acid binding domain DN399_21695 PF02938 GAD domain DN399_21700 PF03129 Anticodon binding domain DN399_21700 PF13393 Histidyl-tRNA synthetase DN399_21705 PF02580 D-Tyr-tRNA(Tyr) deacylase DN399_21710 PF04607 Region found in RelA / SpoT proteins DN399_21710 PF13291 ACT domain DN399_21710 PF02824 TGS domain DN399_21715 PF00156 Phosphoribosyl transferase domain DN399_21720 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DN399_21720 PF17768 RecJ OB domain DN399_21720 PF01368 DHH family DN399_21720 PF02272 DHHA1 domain DN399_21725 PF01545 Cation efflux family DN399_21725 PF16916 Dimerisation domain of Zinc Transporter DN399_21730 PF07549 SecD/SecF GG Motif DN399_21730 PF02355 Protein export membrane protein DN399_21735 PF13797 Post-transcriptional regulator DN399_21740 PF01943 Polysaccharide biosynthesis protein DN399_21740 PF14667 Polysaccharide biosynthesis C-terminal domain DN399_21745 PF04239 Protein of unknown function (DUF421) DN399_21755 PF02699 Preprotein translocase subunit DN399_21760 PF01702 Queuine tRNA-ribosyltransferase DN399_21765 PF02547 Queuosine biosynthesis protein DN399_21770 PF11146 Protein of unknown function (DUF2905) DN399_21775 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN399_21775 PF17864 RuvB AAA lid domain DN399_21775 PF05491 RuvB C-terminal winged helix domain DN399_21780 PF07499 RuvA, C-terminal domain DN399_21780 PF01330 RuvA N terminal domain DN399_21785 PF01497 Periplasmic binding protein DN399_21805 PF01476 LysM domain DN399_21810 PF02445 Quinolinate synthetase A protein DN399_21815 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DN399_21815 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DN399_21820 PF02910 Fumarate reductase flavoprotein C-term DN399_21820 PF00890 FAD binding domain DN399_21825 PF00266 Aminotransferase class-V DN399_21830 PF08279 HTH domain DN399_21830 PF02829 3H domain DN399_21835 PF03473 MOSC domain DN399_21835 PF03475 3-alpha domain DN399_21840 PF00800 Prephenate dehydratase DN399_21840 PF01842 ACT domain DN399_21845 PF02687 FtsX-like permease family DN399_21850 PF02687 FtsX-like permease family DN399_21855 PF00005 ABC transporter DN399_21860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_21865 PF00072 Response regulator receiver domain DN399_21865 PF00486 Transcriptional regulatory protein, C terminal DN399_21870 PF01018 GTP1/OBG DN399_21870 PF01926 50S ribosome-binding GTPase DN399_21870 PF09269 Domain of unknown function (DUF1967) DN399_21875 PF14682 Sporulation initiation phospho-transferase B, C-terminal DN399_21875 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN399_21880 PF01016 Ribosomal L27 protein DN399_21885 PF04327 Cysteine protease Prp DN399_21890 PF00829 Ribosomal prokaryotic L21 protein DN399_21895 PF10150 Ribonuclease E/G family DN399_21895 PF00575 S1 RNA binding domain DN399_21900 PF02163 Peptidase family M50 DN399_21905 PF01551 Peptidase family M23 DN399_21910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN399_21915 PF03775 Septum formation inhibitor MinC, C-terminal domain DN399_21925 PF04085 rod shape-determining protein MreC DN399_21935 PF04002 RadC-like JAB domain DN399_21940 PF02545 Maf-like protein DN399_21950 PF02875 Mur ligase family, glutamate ligase domain DN399_21950 PF08245 Mur ligase middle domain DN399_21955 PF08264 Anticodon-binding domain of tRNA DN399_21955 PF00133 tRNA synthetases class I (I, L, M and V) DN399_21955 PF10458 Valyl tRNA synthetase tRNA binding arm DN399_21965 PF01476 LysM domain DN399_21970 PF00202 Aminotransferase class-III DN399_21975 PF00490 Delta-aminolevulinic acid dehydratase DN399_21980 PF02602 Uroporphyrinogen-III synthase HemD DN399_21985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DN399_21985 PF03900 Porphobilinogen deaminase, C-terminal domain DN399_21990 PF01578 Cytochrome C assembly protein DN399_21995 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DN399_21995 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DN399_21995 PF01488 Shikimate / quinate 5-dehydrogenase DN399_22000 PF01047 MarR family DN399_22005 PF02566 OsmC-like protein DN399_22010 PF01926 50S ribosome-binding GTPase DN399_22015 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN399_22015 PF05362 Lon protease (S16) C-terminal proteolytic domain DN399_22015 PF00004 ATPase family associated with various cellular activities (AAA) DN399_22020 PF00004 ATPase family associated with various cellular activities (AAA) DN399_22020 PF05362 Lon protease (S16) C-terminal proteolytic domain DN399_22025 PF10431 C-terminal, D2-small domain, of ClpB protein DN399_22025 PF07724 AAA domain (Cdc48 subfamily) DN399_22025 PF06689 ClpX C4-type zinc finger DN399_22030 PF05697 Bacterial trigger factor protein (TF) DN399_22030 PF05698 Bacterial trigger factor protein (TF) C-terminus DN399_22030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN399_22045 PF08000 Bacterial PH domain DN399_22045 PF11724 YvbH-like oligomerisation region DN399_22065 PF12850 Calcineurin-like phosphoesterase superfamily domain DN399_22070 PF01725 Ham1 family DN399_22075 PF03725 3' exoribonuclease family, domain 2 DN399_22075 PF01138 3' exoribonuclease family, domain 1 DN399_22080 PF10646 Sporulation and spore germination DN399_22085 PF01177 Asp/Glu/Hydantoin racemase DN399_22095 PF00196 Bacterial regulatory proteins, luxR family DN399_22100 PF00860 Permease family DN399_22105 PF07969 Amidohydrolase family DN399_22110 PF04024 PspC domain DN399_22115 PF01381 Helix-turn-helix DN399_22115 PF07883 Cupin domain DN399_22120 PF13536 Putative multidrug resistance efflux transporter DN399_22125 PF00230 Major intrinsic protein DN399_22130 PF02082 Transcriptional regulator DN399_22140 PF13732 Domain of unknown function (DUF4162) DN399_22140 PF00005 ABC transporter DN399_22145 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DN399_22150 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN399_22150 PF00691 OmpA family DN399_22155 PF01618 MotA/TolQ/ExbB proton channel family DN399_22165 PF02557 D-alanyl-D-alanine carboxypeptidase DN399_22170 PF03061 Thioesterase superfamily DN399_22175 PF13085 2Fe-2S iron-sulfur cluster binding domain DN399_22175 PF13183 4Fe-4S dicluster domain DN399_22180 PF00890 FAD binding domain DN399_22180 PF02910 Fumarate reductase flavoprotein C-term DN399_22185 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DN399_22190 PF10702 Protein of unknown function (DUF2507) DN399_22195 PF08459 UvrC Helix-hairpin-helix N-terminal DN399_22195 PF01541 GIY-YIG catalytic domain DN399_22195 PF02151 UvrB/uvrC motif DN399_22200 PF00085 Thioredoxin DN399_22205 PF00766 Electron transfer flavoprotein FAD-binding domain DN399_22205 PF01012 Electron transfer flavoprotein domain DN399_22210 PF01012 Electron transfer flavoprotein domain DN399_22215 PF00378 Enoyl-CoA hydratase/isomerase DN399_22220 PF08359 YsiA-like protein, C-terminal region DN399_22220 PF00440 Bacterial regulatory proteins, tetR family DN399_22225 PF00501 AMP-binding enzyme DN399_22225 PF13193 AMP-binding enzyme C-terminal domain DN399_22235 PF01497 Periplasmic binding protein DN399_22240 PF01032 FecCD transport family DN399_22255 PF05163 DinB family DN399_22280 PF00005 ABC transporter DN399_22285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_22285 PF00512 His Kinase A (phospho-acceptor) domain DN399_22290 PF00486 Transcriptional regulatory protein, C terminal DN399_22290 PF00072 Response regulator receiver domain DN399_22295 PF09962 Uncharacterized conserved protein (DUF2196) DN399_22300 PF10672 S-adenosylmethionine-dependent methyltransferase DN399_22300 PF17785 PUA-like domain DN399_22305 PF03992 Antibiotic biosynthesis monooxygenase DN399_22310 PF04203 Sortase domain DN399_22315 PF00005 ABC transporter DN399_22320 PF01032 FecCD transport family DN399_22325 PF01497 Periplasmic binding protein DN399_22330 PF05031 Iron Transport-associated domain DN399_22340 PF05031 Iron Transport-associated domain DN399_22345 PF05525 Branched-chain amino acid transport protein DN399_22350 PF00849 RNA pseudouridylate synthase DN399_22350 PF01479 S4 domain DN399_22355 PF01713 Smr domain DN399_22355 PF00488 MutS domain V DN399_22360 PF14716 Helix-hairpin-helix domain DN399_22360 PF02811 PHP domain DN399_22360 PF14791 DNA polymerase beta thumb DN399_22365 PF02674 Colicin V production protein DN399_22370 PF05164 Cell division protein ZapA DN399_22375 PF11858 Domain of unknown function (DUF3378) DN399_22375 PF01351 Ribonuclease HII DN399_22385 PF00106 short chain dehydrogenase DN399_22390 PF01336 OB-fold nucleic acid binding domain DN399_22390 PF00152 tRNA synthetases class II (D, K and N) DN399_22395 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN399_22395 PF03147 Ferredoxin-fold anticodon binding domain DN399_22395 PF03484 tRNA synthetase B5 domain DN399_22395 PF03483 B3/4 domain DN399_22395 PF01588 Putative tRNA binding domain DN399_22400 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DN399_22400 PF01409 tRNA synthetases class II core domain (F) DN399_22405 PF00588 SpoU rRNA Methylase family DN399_22405 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN399_22410 PF14098 Small, acid-soluble spore protein I DN399_22415 PF01966 HD domain DN399_22425 PF07690 Major Facilitator Superfamily DN399_22435 PF00440 Bacterial regulatory proteins, tetR family DN399_22435 PF16859 Tetracyclin repressor-like, C-terminal domain DN399_22440 PF05343 M42 glutamyl aminopeptidase DN399_22450 PF00453 Ribosomal protein L20 DN399_22455 PF01632 Ribosomal protein L35 DN399_22460 PF00707 Translation initiation factor IF-3, C-terminal domain DN399_22460 PF05198 Translation initiation factor IF-3, N-terminal domain DN399_22465 PF02824 TGS domain DN399_22465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN399_22465 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN399_22465 PF03129 Anticodon binding domain DN399_22470 PF08812 YtxC-like family DN399_22475 PF13783 Domain of unknown function (DUF4177) DN399_22480 PF01695 IstB-like ATP binding protein DN399_22480 PF07319 Primosomal protein DnaI N-terminus DN399_22485 PF07261 Replication initiation and membrane attachment DN399_22490 PF03477 ATP cone domain DN399_22495 PF02675 S-adenosylmethionine decarboxylase DN399_22500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN399_22500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN399_22505 PF01121 Dephospho-CoA kinase DN399_22510 PF02659 Putative manganese efflux pump DN399_22515 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DN399_22515 PF06827 Zinc finger found in FPG and IleRS DN399_22515 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DN399_22520 PF00476 DNA polymerase family A DN399_22520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN399_22520 PF01367 5'-3' exonuclease, C-terminal SAM fold DN399_22525 PF16736 Single Cache-like DN399_22525 PF00989 PAS fold DN399_22525 PF00512 His Kinase A (phospho-acceptor) domain DN399_22525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_22530 PF00486 Transcriptional regulatory protein, C terminal DN399_22530 PF00072 Response regulator receiver domain DN399_22545 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN399_22545 PF00056 lactate/malate dehydrogenase, NAD binding domain DN399_22550 PF00180 Isocitrate/isopropylmalate dehydrogenase DN399_22555 PF00285 Citrate synthase, C-terminal domain DN399_22565 PF04284 Protein of unknown function (DUF441) DN399_22570 PF01594 AI-2E family transporter DN399_22575 PF04186 FxsA cytoplasmic membrane protein DN399_22580 PF02887 Pyruvate kinase, alpha/beta domain DN399_22580 PF00224 Pyruvate kinase, barrel domain DN399_22580 PF00391 PEP-utilising enzyme, mobile domain DN399_22585 PF00365 Phosphofructokinase DN399_22590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN399_22595 PF01039 Carboxyl transferase domain DN399_22595 PF17848 Acetyl-coA carboxylase zinc finger domain DN399_22600 PF00392 Bacterial regulatory proteins, gntR family DN399_22605 PF03949 Malic enzyme, NAD binding domain DN399_22605 PF00390 Malic enzyme, N-terminal domain DN399_22610 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN399_22610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN399_22610 PF01336 OB-fold nucleic acid binding domain DN399_22610 PF02811 PHP domain DN399_22610 PF14579 Helix-hairpin-helix motif DN399_22615 PF14034 Sporulation protein YtrH DN399_22625 PF01368 DHH family DN399_22625 PF02272 DHHA1 domain DN399_22630 PF14007 YtpI-like protein DN399_22640 PF07085 DRTGG domain DN399_22640 PF00392 Bacterial regulatory proteins, gntR family DN399_22640 PF00571 CBS domain DN399_22640 PF03061 Thioesterase superfamily DN399_22650 PF00557 Metallopeptidase family M24 DN399_22650 PF01321 Creatinase/Prolidase N-terminal domain DN399_22685 PF12746 GNAT acetyltransferase DN399_22690 PF07883 Cupin domain DN399_22700 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN399_22700 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN399_22710 PF00582 Universal stress protein family DN399_22730 PF14698 Argininosuccinate lyase C-terminal DN399_22730 PF00206 Lyase DN399_22735 PF00764 Arginosuccinate synthase DN399_22750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_22750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_22755 PF12787 EcsC protein family DN399_22770 PF00871 Acetokinase family DN399_22775 PF02384 N-6 DNA Methylase DN399_22780 PF08534 Redoxin DN399_22785 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN399_22795 PF01513 ATP-NAD kinase DN399_22800 PF07969 Amidohydrolase family DN399_22810 PF00501 AMP-binding enzyme DN399_22810 PF13193 AMP-binding enzyme C-terminal domain DN399_22815 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN399_22820 PF02926 THUMP domain DN399_22820 PF02568 Thiamine biosynthesis protein (ThiI) DN399_22825 PF00266 Aminotransferase class-V DN399_22830 PF06160 Septation ring formation regulator, EzrA DN399_22835 PF03466 LysR substrate binding domain DN399_22835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_22840 PF00892 EamA-like transporter family DN399_22845 PF00440 Bacterial regulatory proteins, tetR family DN399_22850 PF13185 GAF domain DN399_22855 PF01053 Cys/Met metabolism PLP-dependent enzyme DN399_22860 PF00163 Ribosomal protein S4/S9 N-terminal domain DN399_22860 PF01479 S4 domain DN399_22880 PF00579 tRNA synthetases class I (W and Y) DN399_22880 PF01479 S4 domain DN399_22885 PF14602 Hexapeptide repeat of succinyl-transferase DN399_22885 PF12464 Maltose acetyltransferase DN399_22890 PF00501 AMP-binding enzyme DN399_22890 PF13193 AMP-binding enzyme C-terminal domain DN399_22895 PF00583 Acetyltransferase (GNAT) family DN399_22900 PF00571 CBS domain DN399_22905 PF00850 Histone deacetylase domain DN399_22920 PF00072 Response regulator receiver domain DN399_22920 PF00486 Transcriptional regulatory protein, C terminal DN399_22925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_22925 PF13426 PAS domain DN399_22925 PF00672 HAMP domain DN399_22925 PF00512 His Kinase A (phospho-acceptor) domain DN399_22930 PF12796 Ankyrin repeats (3 copies) DN399_22935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN399_22940 PF01741 Large-conductance mechanosensitive channel, MscL DN399_22965 PF00356 Bacterial regulatory proteins, lacI family DN399_22970 PF01817 Chorismate mutase type II DN399_22970 PF00793 DAHP synthetase I family DN399_22975 PF07537 CamS sex pheromone cAM373 precursor DN399_22980 PF11009 Protein of unknown function (DUF2847) DN399_22990 PF02073 Thermophilic metalloprotease (M29) DN399_23005 PF13302 Acetyltransferase (GNAT) domain DN399_23010 PF02875 Mur ligase family, glutamate ligase domain DN399_23010 PF08245 Mur ligase middle domain DN399_23010 PF01225 Mur ligase family, catalytic domain DN399_23020 PF17854 FtsK alpha domain DN399_23020 PF09397 Ftsk gamma domain DN399_23020 PF01580 FtsK/SpoIIIE family DN399_23025 PF01476 LysM domain DN399_23025 PF01520 N-acetylmuramoyl-L-alanine amidase DN399_23035 PF14794 Domain of unknown function (DUF4479) DN399_23035 PF01588 Putative tRNA binding domain DN399_23040 PF07285 Protein of unknown function (DUF1444) DN399_23045 PF00085 Thioredoxin DN399_23050 PF01931 Protein of unknown function DUF84 DN399_23055 PF05343 M42 glutamyl aminopeptidase DN399_23065 PF00753 Metallo-beta-lactamase superfamily DN399_23070 PF02390 Putative methyltransferase DN399_23075 PF14165 YtzH-like protein DN399_23080 PF01636 Phosphotransferase enzyme family DN399_23085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN399_23085 PF00128 Alpha amylase, catalytic domain DN399_23085 PF17999 Pullulanase N1-terminal domain DN399_23090 PF02834 LigT like Phosphoesterase DN399_23095 PF01546 Peptidase family M20/M25/M40 DN399_23100 PF08220 DeoR-like helix-turn-helix domain DN399_23105 PF01479 S4 domain DN399_23105 PF00849 RNA pseudouridylate synthase DN399_23110 PF01943 Polysaccharide biosynthesis protein DN399_23110 PF14667 Polysaccharide biosynthesis C-terminal domain DN399_23120 PF07690 Major Facilitator Superfamily DN399_23125 PF01022 Bacterial regulatory protein, arsR family DN399_23130 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DN399_23145 PF10957 Sporulation protein Cse60 DN399_23155 PF02559 CarD-like/TRCF domain DN399_23165 PF06800 Sugar transport protein DN399_23180 PF02391 MoaE protein DN399_23185 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DN399_23190 PF00994 Probable molybdopterin binding domain DN399_23190 PF03453 MoeA N-terminal region (domain I and II) DN399_23190 PF03454 MoeA C-terminal region (domain IV) DN399_23195 PF01967 MoaC family DN399_23200 PF00899 ThiF family DN399_23205 PF04055 Radical SAM superfamily DN399_23205 PF06463 Molybdenum Cofactor Synthesis C DN399_23230 PF00581 Rhodanese-like domain DN399_23240 PF00561 alpha/beta hydrolase fold DN399_23245 PF03323 Bacillus/Clostridium GerA spore germination protein DN399_23250 PF03845 Spore germination protein DN399_23275 PF00133 tRNA synthetases class I (I, L, M and V) DN399_23275 PF13603 Leucyl-tRNA synthetase, Domain 2 DN399_23275 PF09334 tRNA synthetases class I (M) DN399_23275 PF08264 Anticodon-binding domain of tRNA DN399_23280 PF07690 Major Facilitator Superfamily DN399_23285 PF00999 Sodium/hydrogen exchanger family DN399_23290 PF02080 TrkA-C domain DN399_23295 PF00589 Phage integrase family DN399_23305 PF00005 ABC transporter DN399_23310 PF07786 Protein of unknown function (DUF1624) DN399_23310 PF04235 Protein of unknown function (DUF418) DN399_23320 PF10732 Protein of unknown function (DUF2524) DN399_23325 PF16199 Radical_SAM C-terminal domain DN399_23325 PF04055 Radical SAM superfamily DN399_23330 PF06962 Putative rRNA methylase DN399_23350 PF10776 Protein of unknown function (DUF2600) DN399_23355 PF12146 Serine aminopeptidase, S33 DN399_23360 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_23365 PF01569 PAP2 superfamily DN399_23370 PF13439 Glycosyltransferase Family 4 DN399_23370 PF00534 Glycosyl transferases group 1 DN399_23375 PF12804 MobA-like NTP transferase domain DN399_23380 PF00994 Probable molybdopterin binding domain DN399_23390 PF13302 Acetyltransferase (GNAT) domain DN399_23395 PF02772 S-adenosylmethionine synthetase, central domain DN399_23395 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN399_23395 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN399_23400 PF01293 Phosphoenolpyruvate carboxykinase DN399_23465 PF13426 PAS domain DN399_23465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_23465 PF00512 His Kinase A (phospho-acceptor) domain DN399_23465 PF00989 PAS fold DN399_23465 PF13188 PAS domain DN399_23470 PF02743 Cache domain DN399_23470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_23470 PF00512 His Kinase A (phospho-acceptor) domain DN399_23485 PF00561 alpha/beta hydrolase fold DN399_23485 PF08386 TAP-like protein DN399_23490 PF00884 Sulfatase DN399_23510 PF00005 ABC transporter DN399_23515 PF00528 Binding-protein-dependent transport system inner membrane component DN399_23530 PF13419 Haloacid dehalogenase-like hydrolase DN399_23540 PF00293 NUDIX domain DN399_23575 PF02664 S-Ribosylhomocysteinase (LuxS) DN399_23580 PF01809 Putative membrane protein insertion efficiency factor DN399_23585 PF00484 Carbonic anhydrase DN399_23590 PF01654 Cytochrome bd terminal oxidase subunit I DN399_23595 PF02322 Cytochrome bd terminal oxidase subunit II DN399_23600 PF10676 Spore germination protein gerPA/gerPF DN399_23610 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_23610 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_23635 PF04012 PspA/IM30 family DN399_23650 PF17910 FeoB cytosolic helical domain DN399_23650 PF07670 Nucleoside recognition DN399_23650 PF07664 Ferrous iron transport protein B C terminus DN399_23650 PF02421 Ferrous iron transport protein B DN399_23660 PF09515 Thiamine transporter protein (Thia_YuaJ) DN399_23665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_23665 PF00512 His Kinase A (phospho-acceptor) domain DN399_23665 PF00672 HAMP domain DN399_23670 PF00486 Transcriptional regulatory protein, C terminal DN399_23670 PF00072 Response regulator receiver domain DN399_23700 PF00781 Diacylglycerol kinase catalytic domain DN399_23750 PF00248 Aldo/keto reductase family DN399_23765 PF09335 SNARE associated Golgi protein DN399_23770 PF00398 Ribosomal RNA adenine dimethylase DN399_23775 PF02687 FtsX-like permease family DN399_23780 PF00005 ABC transporter DN399_23785 PF06445 GyrI-like small molecule binding domain DN399_23785 PF12833 Helix-turn-helix domain DN399_23795 PF13630 SdpI/YhfL protein family DN399_23795 PF07853 Protein of unknown function (DUF1648) DN399_23800 PF01022 Bacterial regulatory protein, arsR family DN399_23805 PF00486 Transcriptional regulatory protein, C terminal DN399_23805 PF00072 Response regulator receiver domain DN399_23810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_23815 PF02687 FtsX-like permease family DN399_23820 PF02687 FtsX-like permease family DN399_23825 PF00005 ABC transporter DN399_23830 PF02687 FtsX-like permease family DN399_23840 PF00440 Bacterial regulatory proteins, tetR family DN399_23840 PF13977 BetI-type transcriptional repressor, C-terminal DN399_23850 PF02447 GntP family permease DN399_23865 PF07071 KDGP aldolase DN399_23870 PF03841 L-seryl-tRNA selenium transferase DN399_23875 PF01979 Amidohydrolase family DN399_23880 PF02557 D-alanyl-D-alanine carboxypeptidase DN399_23885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_23885 PF00512 His Kinase A (phospho-acceptor) domain DN399_23890 PF00486 Transcriptional regulatory protein, C terminal DN399_23890 PF00072 Response regulator receiver domain DN399_23895 PF13378 Enolase C-terminal domain-like DN399_23895 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN399_23900 PF00501 AMP-binding enzyme DN399_23900 PF13193 AMP-binding enzyme C-terminal domain DN399_23905 PF00378 Enoyl-CoA hydratase/isomerase DN399_23910 PF00561 alpha/beta hydrolase fold DN399_23915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN399_23915 PF16582 Middle domain of thiamine pyrophosphate DN399_23915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN399_23920 PF00425 chorismate binding enzyme DN399_23925 PF01040 UbiA prenyltransferase family DN399_23930 PF01258 Prokaryotic dksA/traR C4-type zinc finger DN399_23935 PF00313 'Cold-shock' DNA-binding domain DN399_23950 PF00343 Carbohydrate phosphorylase DN399_23955 PF08323 Starch synthase catalytic domain DN399_23955 PF00534 Glycosyl transferases group 1 DN399_23960 PF00483 Nucleotidyl transferase DN399_23965 PF00483 Nucleotidyl transferase DN399_23970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN399_23970 PF00128 Alpha amylase, catalytic domain DN399_23970 PF02806 Alpha amylase, C-terminal all-beta domain DN399_23980 PF00082 Subtilase family DN399_23980 PF05922 Peptidase inhibitor I9 DN399_23980 PF13860 FlgD Ig-like domain DN399_23980 PF02225 PA domain DN399_23990 PF00056 lactate/malate dehydrogenase, NAD binding domain DN399_23990 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN399_23995 PF00440 Bacterial regulatory proteins, tetR family DN399_24095 PF05698 Bacterial trigger factor protein (TF) C-terminus DN399_24095 PF05697 Bacterial trigger factor protein (TF) DN399_24130 PF02308 MgtC family DN399_24135 PF07885 Ion channel DN399_24135 PF02254 TrkA-N domain DN399_24140 PF08868 YugN-like family DN399_24145 PF00342 Phosphoglucose isomerase DN399_24155 PF04070 Domain of unknown function (DUF378) DN399_24160 PF00575 S1 RNA binding domain DN399_24165 PF00155 Aminotransferase class I and II DN399_24170 PF01037 Lrp/AsnC ligand binding domain DN399_24175 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN399_24175 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN399_24180 PF00561 alpha/beta hydrolase fold DN399_24180 PF08386 TAP-like protein DN399_24190 PF00155 Aminotransferase class I and II DN399_24200 PF08810 Kinase associated protein B DN399_24205 PF00929 Exonuclease DN399_24210 PF03600 Citrate transporter DN399_24225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN399_24225 PF03129 Anticodon binding domain DN399_24230 PF03061 Thioesterase superfamily DN399_24240 PF02632 BioY family DN399_24245 PF00483 Nucleotidyl transferase DN399_24250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN399_24250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN399_24250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN399_24250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN399_24255 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN399_24255 PF10372 Bacterial membrane-spanning protein N-terminus DN399_24270 PF00892 EamA-like transporter family DN399_24275 PF01040 UbiA prenyltransferase family DN399_24280 PF02789 Cytosol aminopeptidase family, N-terminal domain DN399_24280 PF00883 Cytosol aminopeptidase family, catalytic domain DN399_24285 PF06725 3D domain DN399_24295 PF13344 Haloacid dehalogenase-like hydrolase DN399_24295 PF00293 NUDIX domain DN399_24300 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_24305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_24315 PF06445 GyrI-like small molecule binding domain DN399_24330 PF04463 Protein of unknown function (DUF523) DN399_24350 PF01521 Iron-sulphur cluster biosynthesis DN399_24355 PF01678 Diaminopimelate epimerase DN399_24360 PF07293 Protein of unknown function (DUF1450) DN399_24365 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_24375 PF03412 Peptidase C39 family DN399_24375 PF00005 ABC transporter DN399_24375 PF00664 ABC transporter transmembrane region DN399_24380 PF03649 Uncharacterised protein family (UPF0014) DN399_24385 PF03831 PhnA domain DN399_24385 PF08274 PhnA Zinc-Ribbon DN399_24435 PF07315 Protein of unknown function (DUF1462) DN399_24440 PF01106 NifU-like domain DN399_24455 PF04608 Phosphatidylglycerophosphatase A DN399_24475 PF11202 Phosphoribosyl transferase (PRTase) DN399_24475 PF15608 PELOTA RNA binding domain DN399_24490 PF02525 Flavodoxin-like fold DN399_24495 PF13344 Haloacid dehalogenase-like hydrolase DN399_24505 PF01934 Protein of unknown function DUF86 DN399_24510 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN399_24535 PF06265 Protein of unknown function (DUF1027) DN399_24540 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN399_24545 PF07739 TipAS antibiotic-recognition domain DN399_24545 PF13411 MerR HTH family regulatory protein DN399_24550 PF10086 YhfC intramembrane metalloprotease DN399_24570 PF04055 Radical SAM superfamily DN399_24570 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DN399_24575 PF01551 Peptidase family M23 DN399_24580 PF09560 Sporulation protein YunB (Spo_YunB) DN399_24585 PF08827 Domain of unknown function (DUF1805) DN399_24590 PF02872 5'-nucleotidase, C-terminal domain DN399_24600 PF01458 Uncharacterized protein family (UPF0051) DN399_24605 PF01592 NifU-like N terminal domain DN399_24610 PF00266 Aminotransferase class-V DN399_24615 PF01458 Uncharacterized protein family (UPF0051) DN399_24620 PF00005 ABC transporter DN399_24625 PF03180 NLPA lipoprotein DN399_24630 PF03180 NLPA lipoprotein DN399_24635 PF00528 Binding-protein-dependent transport system inner membrane component DN399_24640 PF00005 ABC transporter DN399_24640 PF09383 NIL domain DN399_24650 PF00085 Thioredoxin DN399_24655 PF01751 Toprim domain DN399_24660 PF01597 Glycine cleavage H-protein DN399_24665 PF03960 ArsC family DN399_24685 PF00056 lactate/malate dehydrogenase, NAD binding domain DN399_24685 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN399_24705 PF13305 Tetracyclin repressor-like, C-terminal domain DN399_24705 PF00440 Bacterial regulatory proteins, tetR family DN399_24710 PF00753 Metallo-beta-lactamase superfamily DN399_24715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN399_24715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN399_24715 PF02770 Acyl-CoA dehydrogenase, middle domain DN399_24720 PF02803 Thiolase, C-terminal domain DN399_24720 PF00108 Thiolase, N-terminal domain DN399_24725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN399_24725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN399_24725 PF00378 Enoyl-CoA hydratase/isomerase DN399_24730 PF14115 YuzL-like protein DN399_24735 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_24735 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_24740 PF01619 Proline dehydrogenase DN399_24745 PF10835 Protein of unknown function (DUF2573) DN399_24750 PF01910 Thiamine-binding protein DN399_24755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_24755 PF00672 HAMP domain DN399_24755 PF02743 Cache domain DN399_24765 PF07690 Major Facilitator Superfamily DN399_24770 PF13520 Amino acid permease DN399_24785 PF02096 60Kd inner membrane protein DN399_24795 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN399_24795 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN399_24835 PF09335 SNARE associated Golgi protein DN399_24845 PF03734 L,D-transpeptidase catalytic domain DN399_24845 PF17969 L,D-transpeptidase C-terminal domain DN399_24850 PF00486 Transcriptional regulatory protein, C terminal DN399_24850 PF00072 Response regulator receiver domain DN399_24855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_24855 PF00512 His Kinase A (phospho-acceptor) domain DN399_24855 PF00989 PAS fold DN399_24855 PF16736 Single Cache-like DN399_24870 PF08264 Anticodon-binding domain of tRNA DN399_24870 PF09334 tRNA synthetases class I (M) DN399_24880 PF02743 Cache domain DN399_24880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_24880 PF00672 HAMP domain DN399_24885 PF00672 HAMP domain DN399_24885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_24885 PF02743 Cache domain DN399_24890 PF01883 Iron-sulfur cluster assembly protein DN399_24895 PF07504 Fungalysin/Thermolysin Propeptide Motif DN399_24895 PF03413 Peptidase propeptide and YPEB domain DN399_24895 PF01447 Thermolysin metallopeptidase, catalytic domain DN399_24895 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN399_24900 PF02678 Pirin DN399_24900 PF17954 Quercetinase C-terminal cupin domain DN399_24905 PF01047 MarR family DN399_24915 PF09335 SNARE associated Golgi protein DN399_24920 PF00999 Sodium/hydrogen exchanger family DN399_24925 PF02080 TrkA-C domain DN399_24930 PF01235 Sodium:alanine symporter family DN399_24935 PF00210 Ferritin-like domain DN399_24960 PF03641 Possible lysine decarboxylase DN399_24970 PF00210 Ferritin-like domain DN399_24980 PF01773 Na+ dependent nucleoside transporter N-terminus DN399_24980 PF07662 Na+ dependent nucleoside transporter C-terminus DN399_24985 PF01773 Na+ dependent nucleoside transporter N-terminus DN399_24985 PF07662 Na+ dependent nucleoside transporter C-terminus DN399_24990 PF01235 Sodium:alanine symporter family DN399_24995 PF01235 Sodium:alanine symporter family DN399_25000 PF13460 NAD(P)H-binding DN399_25015 PF00248 Aldo/keto reductase family DN399_25020 PF07690 Major Facilitator Superfamily DN399_25025 PF01638 HxlR-like helix-turn-helix DN399_25030 PF07849 Protein of unknown function (DUF1641) DN399_25035 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_25040 PF01479 S4 domain DN399_25040 PF00579 tRNA synthetases class I (W and Y) DN399_25045 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN399_25045 PF01565 FAD binding domain DN399_25055 PF00672 HAMP domain DN399_25055 PF17202 Single cache domain 3 DN399_25055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_25065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN399_25070 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN399_25085 PF13302 Acetyltransferase (GNAT) domain DN399_25090 PF06146 Phosphate-starvation-inducible E DN399_25115 PF17440 Thiol-activated cytolysin beta sandwich domain DN399_25115 PF01289 Thiol-activated cytolysin DN399_25120 PF00005 ABC transporter DN399_25125 PF01032 FecCD transport family DN399_25130 PF01032 FecCD transport family DN399_25140 PF00486 Transcriptional regulatory protein, C terminal DN399_25140 PF00072 Response regulator receiver domain DN399_25175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_25180 PF00072 Response regulator receiver domain DN399_25180 PF00486 Transcriptional regulatory protein, C terminal DN399_25185 PF00005 ABC transporter DN399_25200 PF04235 Protein of unknown function (DUF418) DN399_25200 PF07786 Protein of unknown function (DUF1624) DN399_25205 PF00005 ABC transporter DN399_25235 PF01668 SmpB protein DN399_25240 PF00773 RNB domain DN399_25240 PF17876 Cold shock domain DN399_25240 PF00575 S1 RNA binding domain DN399_25240 PF08206 Ribonuclease B OB domain DN399_25245 PF12146 Serine aminopeptidase, S33 DN399_25250 PF03840 Preprotein translocase SecG subunit DN399_25255 PF04172 LrgB-like family DN399_25260 PF03788 LrgA family DN399_25265 PF01156 Inosine-uridine preferring nucleoside hydrolase DN399_25270 PF00113 Enolase, C-terminal TIM barrel domain DN399_25270 PF03952 Enolase, N-terminal domain DN399_25275 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN399_25275 PF01676 Metalloenzyme superfamily DN399_25280 PF00121 Triosephosphate isomerase DN399_25285 PF00162 Phosphoglycerate kinase DN399_25290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN399_25290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN399_25295 PF04198 Putative sugar-binding domain DN399_25305 PF04552 Sigma-54, DNA binding domain DN399_25305 PF04963 Sigma-54 factor, core binding domain DN399_25305 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN399_25325 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN399_25330 PF07451 Stage V sporulation protein AD (SpoVAD) DN399_25335 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN399_25345 PF04239 Protein of unknown function (DUF421) DN399_25350 PF00574 Clp protease DN399_25355 PF00381 PTS HPr component phosphorylation site DN399_25360 PF10298 WhiA N-terminal LAGLIDADG-like domain DN399_25360 PF14527 WhiA LAGLIDADG-like domain DN399_25360 PF02650 WhiA C-terminal HTH domain DN399_25365 PF01933 Uncharacterised protein family UPF0052 DN399_25370 PF03668 P-loop ATPase protein family DN399_25375 PF00293 NUDIX domain DN399_25385 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN399_25395 PF14602 Hexapeptide repeat of succinyl-transferase DN399_25400 PF13419 Haloacid dehalogenase-like hydrolase DN399_25405 PF01790 Prolipoprotein diacylglyceryl transferase DN399_25410 PF02603 HPr Serine kinase N terminus DN399_25410 PF07475 HPr Serine kinase C-terminal domain DN399_25415 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DN399_25425 PF17760 UvrA interaction domain DN399_25425 PF17755 UvrA DNA-binding domain DN399_25425 PF00005 ABC transporter DN399_25430 PF02151 UvrB/uvrC motif DN399_25430 PF17757 UvrB interaction domain DN399_25430 PF12344 Ultra-violet resistance protein B DN399_25430 PF04851 Type III restriction enzyme, res subunit DN399_25430 PF00271 Helicase conserved C-terminal domain DN399_25445 PF13411 MerR HTH family regulatory protein DN399_25445 PF07739 TipAS antibiotic-recognition domain DN399_25460 PF03601 Conserved hypothetical protein 698 DN399_25465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_25465 PF03466 LysR substrate binding domain DN399_25470 PF09278 MerR, DNA binding DN399_25470 PF00376 MerR family regulatory protein DN399_25475 PF03358 NADPH-dependent FMN reductase DN399_25485 PF01906 Putative heavy-metal-binding DN399_25490 PF00664 ABC transporter transmembrane region DN399_25490 PF00005 ABC transporter DN399_25495 PF17820 PDZ domain DN399_25500 PF01471 Putative peptidoglycan binding domain DN399_25500 PF17820 PDZ domain DN399_25500 PF03572 Peptidase family S41 DN399_25505 PF18075 FtsX extracellular domain DN399_25505 PF02687 FtsX-like permease family DN399_25510 PF00005 ABC transporter DN399_25520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN399_25530 PF02810 SEC-C motif DN399_25530 PF07516 SecA Wing and Scaffold domain DN399_25530 PF01043 SecA preprotein cross-linking domain DN399_25530 PF07517 SecA DEAD-like domain DN399_25535 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DN399_25535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN399_25540 PF00313 'Cold-shock' DNA-binding domain DN399_25550 PF04851 Type III restriction enzyme, res subunit DN399_25550 PF00271 Helicase conserved C-terminal domain DN399_25555 PF01476 LysM domain DN399_25555 PF00877 NlpC/P60 family DN399_25560 PF01638 HxlR-like helix-turn-helix DN399_25565 PF02645 Uncharacterised protein, DegV family COG1307 DN399_25570 PF09186 Domain of unknown function (DUF1949) DN399_25570 PF01205 Uncharacterized protein family UPF0029 DN399_25575 PF03816 Cell envelope-related transcriptional attenuator domain DN399_25580 PF02350 UDP-N-acetylglucosamine 2-epimerase DN399_25585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN399_25585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN399_25585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN399_25590 PF00953 Glycosyl transferase family 4 DN399_25600 PF03610 PTS system fructose IIA component DN399_25600 PF00158 Sigma-54 interaction domain DN399_25600 PF00874 PRD domain DN399_25610 PF02417 Chromate transporter DN399_25615 PF04794 YdjC-like protein DN399_25620 PF11975 Family 4 glycosyl hydrolase C-terminal domain DN399_25620 PF02056 Family 4 glycosyl hydrolase DN399_25625 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN399_25630 PF02378 Phosphotransferase system, EIIC DN399_25635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN399_25645 PF02675 S-adenosylmethionine decarboxylase DN399_25650 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN399_25655 PF02378 Phosphotransferase system, EIIC DN399_25660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN399_25665 PF00375 Sodium:dicarboxylate symporter family DN399_25685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN399_25685 PF03466 LysR substrate binding domain DN399_25695 PF01654 Cytochrome bd terminal oxidase subunit I DN399_25700 PF02322 Cytochrome bd terminal oxidase subunit II DN399_25705 PF02040 Arsenical pump membrane protein DN399_25710 PF01964 Radical SAM ThiC family DN399_25710 PF13667 ThiC-associated domain DN399_25735 PF02652 L-lactate permease DN399_25745 PF09988 Uncharacterized metal-binding protein (DUF2227) DN399_25760 PF00884 Sulfatase DN399_25765 PF01063 Amino-transferase class IV DN399_25770 PF01476 LysM domain DN399_25770 PF00877 NlpC/P60 family DN399_25775 PF01773 Na+ dependent nucleoside transporter N-terminus DN399_25775 PF07662 Na+ dependent nucleoside transporter C-terminus DN399_25790 PF02028 BCCT, betaine/carnitine/choline family transporter DN399_25800 PF01476 LysM domain DN399_25800 PF06725 3D domain DN399_25830 PF04434 SWIM zinc finger DN399_25835 PF12419 SNF2 Helicase protein DN399_25835 PF00176 SNF2 family N-terminal domain DN399_25835 PF00271 Helicase conserved C-terminal domain DN399_25865 PF04542 Sigma-70 region 2 DN399_25865 PF04545 Sigma-70, region 4 DN399_25875 PF02687 FtsX-like permease family DN399_25875 PF12704 MacB-like periplasmic core domain DN399_25880 PF00005 ABC transporter DN399_25900 PF07690 Major Facilitator Superfamily DN399_25915 PF16736 Single Cache-like DN399_25915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_25915 PF00512 His Kinase A (phospho-acceptor) domain DN399_25915 PF00989 PAS fold DN399_25920 PF00072 Response regulator receiver domain DN399_25920 PF00486 Transcriptional regulatory protein, C terminal DN399_25935 PF01370 NAD dependent epimerase/dehydratase family DN399_25940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN399_25940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN399_25940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN399_25945 PF00535 Glycosyl transferase family 2 DN399_25965 PF13439 Glycosyltransferase Family 4 DN399_25970 PF13439 Glycosyltransferase Family 4 DN399_25970 PF00534 Glycosyl transferases group 1 DN399_25975 PF02350 UDP-N-acetylglucosamine 2-epimerase DN399_25980 PF01370 NAD dependent epimerase/dehydratase family DN399_25985 PF08485 Polysaccharide biosynthesis protein C-terminal DN399_25985 PF02719 Polysaccharide biosynthesis protein DN399_25990 PF13579 Glycosyl transferase 4-like domain DN399_25995 PF00132 Bacterial transferase hexapeptide (six repeats) DN399_26000 PF02397 Bacterial sugar transferase DN399_26005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN399_26010 PF02719 Polysaccharide biosynthesis protein DN399_26015 PF00483 Nucleotidyl transferase DN399_26025 PF13614 AAA domain DN399_26030 PF02706 Chain length determinant protein DN399_26030 PF13807 G-rich domain on putative tyrosine kinase DN399_26035 PF13614 AAA domain DN399_26040 PF07977 FabA-like domain DN399_26050 PF12116 Stage III sporulation protein D DN399_26060 PF01551 Peptidase family M23 DN399_26070 PF00005 ABC transporter DN399_26075 PF00072 Response regulator receiver domain DN399_26075 PF04397 LytTr DNA-binding domain DN399_26080 PF08486 Stage II sporulation protein DN399_26085 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN399_26095 PF06612 Protein of unknown function (DUF1146) DN399_26100 PF00361 Proton-conducting membrane transporter DN399_26105 PF00361 Proton-conducting membrane transporter DN399_26110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN399_26110 PF00361 Proton-conducting membrane transporter DN399_26110 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DN399_26115 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DN399_26120 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DN399_26130 PF00146 NADH dehydrogenase DN399_26135 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DN399_26140 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DN399_26145 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DN399_26150 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DN399_26155 PF00563 EAL domain DN399_26155 PF00990 Diguanylate cyclase, GGDEF domain DN399_26155 PF03707 Bacterial signalling protein N terminal repeat DN399_26170 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DN399_26170 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DN399_26175 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN399_26175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN399_26180 PF00231 ATP synthase DN399_26185 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN399_26185 PF00306 ATP synthase alpha/beta chain, C terminal domain DN399_26185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN399_26190 PF00213 ATP synthase delta (OSCP) subunit DN399_26195 PF00430 ATP synthase B/B' CF(0) DN399_26200 PF00137 ATP synthase subunit C DN399_26205 PF00119 ATP synthase A chain DN399_26210 PF03899 ATP synthase I chain DN399_26230 PF00464 Serine hydroxymethyltransferase DN399_26235 PF04260 Protein of unknown function (DUF436) DN399_26240 PF02502 Ribose/Galactose Isomerase DN399_26245 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN399_26250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN399_26255 PF07681 DoxX DN399_26260 PF01613 Flavin reductase like domain DN399_26270 PF02659 Putative manganese efflux pump DN399_26275 PF03481 Putative GTP-binding controlling metal-binding DN399_26275 PF01300 Telomere recombination DN399_26285 PF09551 Stage II sporulation protein R (spore_II_R) DN399_26290 PF13847 Methyltransferase domain DN399_26290 PF17827 PrmC N-terminal domain DN399_26295 PF03462 PCRF domain DN399_26295 PF00472 RF-1 domain DN399_26300 PF00265 Thymidine kinase DN399_26305 PF01197 Ribosomal protein L31 DN399_26315 PF07498 Rho termination factor, N-terminal domain DN399_26315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN399_26315 PF07497 Rho termination factor, RNA-binding domain DN399_26320 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN399_26325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN399_26330 PF01116 Fructose-bisphosphate aldolase class-II DN399_26335 PF00072 Response regulator receiver domain DN399_26340 PF10740 Domain of unknown function (DUF2529) DN399_26345 PF00117 Glutamine amidotransferase class-I DN399_26345 PF06418 CTP synthase N-terminus DN399_26350 PF05066 HB1, ASXL, restriction endonuclease HTH domain DN399_26360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN399_26360 PF02770 Acyl-CoA dehydrogenase, middle domain DN399_26360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN399_26365 PF02770 Acyl-CoA dehydrogenase, middle domain DN399_26365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN399_26365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN399_26370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN399_26370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN399_26375 PF00108 Thiolase, N-terminal domain DN399_26375 PF02803 Thiolase, C-terminal domain DN399_26380 PF13183 4Fe-4S dicluster domain DN399_26380 PF02754 Cysteine-rich domain DN399_26385 PF13091 PLD-like domain DN399_26390 PF03851 UV-endonuclease UvdE DN399_26395 PF03707 Bacterial signalling protein N terminal repeat DN399_26395 PF00990 Diguanylate cyclase, GGDEF domain DN399_26395 PF00563 EAL domain DN399_26410 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN399_26410 PF03413 Peptidase propeptide and YPEB domain DN399_26410 PF07504 Fungalysin/Thermolysin Propeptide Motif DN399_26410 PF01447 Thermolysin metallopeptidase, catalytic domain DN399_26415 PF00072 Response regulator receiver domain DN399_26415 PF00196 Bacterial regulatory proteins, luxR family DN399_26420 PF07730 Histidine kinase DN399_26420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_26430 PF00005 ABC transporter DN399_26435 PF00557 Metallopeptidase family M24 DN399_26445 PF02225 PA domain DN399_26445 PF04389 Peptidase family M28 DN399_26465 PF00750 tRNA synthetases class I (R) DN399_26465 PF05746 DALR anticodon binding domain DN399_26465 PF03485 Arginyl tRNA synthetase N terminal domain DN399_26470 PF09148 Domain of unknown function (DUF1934) DN399_26475 PF17676 LD-carboxypeptidase C-terminal domain DN399_26475 PF02016 LD-carboxypeptidase N-terminal domain DN399_26490 PF00491 Arginase family DN399_26495 PF17284 Spermidine synthase tetramerisation domain DN399_26500 PF07690 Major Facilitator Superfamily DN399_26505 PF13411 MerR HTH family regulatory protein DN399_26510 PF03009 Glycerophosphoryl diester phosphodiesterase family DN399_26515 PF00905 Penicillin binding protein transpeptidase domain DN399_26515 PF00912 Transglycosylase DN399_26520 PF08741 YwhD family DN399_26525 PF02163 Peptidase family M50 DN399_26530 PF01361 Tautomerase enzyme DN399_26535 PF01966 HD domain DN399_26540 PF01497 Periplasmic binding protein DN399_26545 PF00005 ABC transporter DN399_26550 PF01032 FecCD transport family DN399_26555 PF01032 FecCD transport family DN399_26560 PF07293 Protein of unknown function (DUF1450) DN399_26570 PF03099 Biotin/lipoate A/B protein ligase family DN399_26575 PF01515 Phosphate acetyl/butaryl transferase DN399_26585 PF00768 D-alanyl-D-alanine carboxypeptidase DN399_26585 PF07943 Penicillin-binding protein 5, C-terminal domain DN399_26590 PF07486 Cell Wall Hydrolase DN399_26595 PF09671 Spore coat protein (Spore_GerQ) DN399_26600 PF04241 Protein of unknown function (DUF423) DN399_26610 PF07885 Ion channel DN399_26610 PF02254 TrkA-N domain DN399_26615 PF00860 Permease family DN399_26625 PF12823 Domain of unknown function (DUF3817) DN399_26630 PF03167 Uracil DNA glycosylase superfamily DN399_26635 PF12679 ABC-2 family transporter protein DN399_26640 PF00005 ABC transporter DN399_26645 PF13472 GDSL-like Lipase/Acylhydrolase family DN399_26650 PF00356 Bacterial regulatory proteins, lacI family DN399_26650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN399_26660 PF01842 ACT domain DN399_26660 PF00742 Homoserine dehydrogenase DN399_26660 PF03447 Homoserine dehydrogenase, NAD binding domain DN399_26665 PF04204 Homoserine O-succinyltransferase DN399_26670 PF01053 Cys/Met metabolism PLP-dependent enzyme DN399_26680 PF13419 Haloacid dehalogenase-like hydrolase DN399_26685 PF00027 Cyclic nucleotide-binding domain DN399_26690 PF02525 Flavodoxin-like fold DN399_26695 PF00196 Bacterial regulatory proteins, luxR family DN399_26695 PF00072 Response regulator receiver domain DN399_26700 PF07730 Histidine kinase DN399_26700 PF13185 GAF domain DN399_26705 PF08543 Phosphomethylpyrimidine kinase DN399_26710 PF00990 Diguanylate cyclase, GGDEF domain DN399_26710 PF07694 5TMR of 5TMR-LYT DN399_26715 PF04328 Selenoprotein, putative DN399_26720 PF13722 5TM C-terminal transporter carbon starvation CstA DN399_26720 PF02554 Carbon starvation protein CstA DN399_26725 PF00072 Response regulator receiver domain DN399_26725 PF04397 LytTr DNA-binding domain DN399_26730 PF07690 Major Facilitator Superfamily DN399_26740 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN399_26745 PF13439 Glycosyltransferase Family 4 DN399_26745 PF00534 Glycosyl transferases group 1 DN399_26755 PF03458 UPF0126 domain DN399_26760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN399_26770 PF03061 Thioesterase superfamily DN399_26780 PF00535 Glycosyl transferase family 2 DN399_26795 PF00535 Glycosyl transferase family 2 DN399_26800 PF12848 ABC transporter DN399_26800 PF00005 ABC transporter DN399_26805 PF00440 Bacterial regulatory proteins, tetR family DN399_26810 PF00873 AcrB/AcrD/AcrF family DN399_26815 PF01625 Peptide methionine sulfoxide reductase DN399_26815 PF01641 SelR domain DN399_26820 PF01594 AI-2E family transporter DN399_26825 PF04172 LrgB-like family DN399_26830 PF03788 LrgA family DN399_26835 PF04397 LytTr DNA-binding domain DN399_26835 PF00072 Response regulator receiver domain DN399_26840 PF07694 5TMR of 5TMR-LYT DN399_26840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_26840 PF06580 Histidine kinase DN399_26840 PF13492 GAF domain DN399_26845 PF07690 Major Facilitator Superfamily DN399_26850 PF02028 BCCT, betaine/carnitine/choline family transporter DN399_26855 PF02898 Nitric oxide synthase, oxygenase domain DN399_26865 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN399_26865 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN399_26875 PF02293 AmiS/UreI family transporter DN399_26885 PF16363 GDP-mannose 4,6 dehydratase DN399_26890 PF03006 Haemolysin-III related DN399_26900 PF00270 DEAD/DEAH box helicase DN399_26900 PF00271 Helicase conserved C-terminal domain DN399_26900 PF03880 DbpA RNA binding domain DN399_26905 PF00478 IMP dehydrogenase / GMP reductase domain DN399_26910 PF08439 Oligopeptidase F DN399_26910 PF01432 Peptidase family M3 DN399_26920 PF13188 PAS domain DN399_26920 PF13426 PAS domain DN399_26920 PF00989 PAS fold DN399_26920 PF00512 His Kinase A (phospho-acceptor) domain DN399_26920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_26925 PF02590 Predicted SPOUT methyltransferase DN399_26935 PF13180 PDZ domain DN399_26940 PF00753 Metallo-beta-lactamase superfamily DN399_26945 PF09648 YycH protein DN399_26955 PF13426 PAS domain DN399_26955 PF00512 His Kinase A (phospho-acceptor) domain DN399_26955 PF00672 HAMP domain DN399_26955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_26960 PF00072 Response regulator receiver domain DN399_26960 PF00486 Transcriptional regulatory protein, C terminal DN399_26985 PF00709 Adenylosuccinate synthetase DN399_26990 PF03796 DnaB-like helicase C terminal domain DN399_26990 PF00772 DnaB-like helicase N terminal domain DN399_26995 PF03948 Ribosomal protein L9, C-terminal domain DN399_26995 PF01281 Ribosomal protein L9, N-terminal domain DN399_27000 PF02272 DHHA1 domain DN399_27000 PF01368 DHH family DN399_27005 PF09991 Predicted membrane protein (DUF2232) DN399_27010 PF01084 Ribosomal protein S18 DN399_27015 PF00436 Single-strand binding protein family DN399_27020 PF01250 Ribosomal protein S6 DN399_27025 PF01926 50S ribosome-binding GTPase DN399_27025 PF06071 Protein of unknown function (DUF933) DN399_27030 PF06107 Bacterial protein of unknown function (DUF951) DN399_27035 PF00924 Mechanosensitive ion channel DN399_27040 PF06866 Protein of unknown function (DUF1256) DN399_27045 PF17762 HTH domain found in ParB protein DN399_27045 PF02195 ParB-like nuclease domain DN399_27050 PF13614 AAA domain DN399_27055 PF17762 HTH domain found in ParB protein DN399_27055 PF02195 ParB-like nuclease domain DN399_27060 PF02527 rRNA small subunit methyltransferase G DN399_27065 PF01134 Glucose inhibited division protein A DN399_27065 PF13932 GidA associated domain DN399_27070 PF10396 GTP-binding protein TrmE N-terminus DN399_27070 PF12631 MnmE helical domain DN399_27070 PF01926 50S ribosome-binding GTPase DN399_27075 PF01424 R3H domain DN399_27075 PF14804 Jag N-terminus DN399_27080 PF02096 60Kd inner membrane protein DN399_27085 PF00825 Ribonuclease P DN399_27090 PF00468 Ribosomal protein L34 DN399_27095 PF08708 Primase C terminal 1 (PriCT-1) DN399_27125 PF18801 response regulator aspartate phosphatase H, N terminal DN399_27145 PF17631 Family of unknown function (DUF5512) DN399_27185 PF17362 Family of unknown function DN399_27200 PF17631 Family of unknown function (DUF5512) DN399_27235 PF00437 Type II/IV secretion system protein DN399_27260 PF04956 TrbC/VIRB2 family DN399_27275 PF12696 TraM recognition site of TraD and TraG DN399_27310 PF00877 NlpC/P60 family DN399_27320 PF17632 Family of unknown function (DUF5513) DN399_27345 PF17633 Family of unknown function (DUF5514) DN399_27350 PF17630 Family of unknown function (DUF5511) DN399_27355 PF18840 Large polyvalent protein associated domain 25 DN399_27355 PF18840 Large polyvalent protein associated domain 25 DN399_27370 PF13154 Protein of unknown function (DUF3991) DN399_27380 PF01751 Toprim domain DN399_27380 PF01131 DNA topoisomerase DN399_27410 PF00266 Aminotransferase class-V DN399_27430 PF02796 Helix-turn-helix domain of resolvase DN399_27430 PF00239 Resolvase, N terminal domain DN399_27445 PF17443 Uncharacterized protein pXO2-72 DN399_27465 PF00817 impB/mucB/samB family DN399_27465 PF11799 impB/mucB/samB family C-terminal domain DN399_27465 PF11798 IMS family HHH motif DN399_27485 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain DN399_27485 PF18413 Neuraminidase-like domain DN399_27495 PF12255 Insecticide toxin TcdB middle/C-terminal region DN399_27495 PF03534 Salmonella virulence plasmid 65kDa B protein DN399_27495 PF12256 Insecticide toxin TcdB middle/N-terminal region DN399_27520 PF07517 SecA DEAD-like domain DN399_27520 PF02810 SEC-C motif DN399_27520 PF01043 SecA preprotein cross-linking domain DN399_27520 PF07516 SecA Wing and Scaffold domain DN399_27535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN399_27565 PF01476 LysM domain DN399_27565 PF00877 NlpC/P60 family DN399_27565 PF08239 Bacterial SH3 domain DN399_27575 PF01037 Lrp/AsnC ligand binding domain DN399_27580 PF01476 LysM domain DN399_27580 PF01471 Putative peptidoglycan binding domain DN399_27580 PF01510 N-acetylmuramoyl-L-alanine amidase DN399_27595 PF00583 Acetyltransferase (GNAT) family DN399_27675 PF01022 Bacterial regulatory protein, arsR family DN399_27710 PF13152 Protein of unknown function (DUF3967) DN399_27710 PF13411 MerR HTH family regulatory protein DN399_27730 PF03315 Serine dehydratase beta chain DN399_27730 PF01842 ACT domain DN399_27740 PF00155 Aminotransferase class I and II DN399_27760 PF17362 Family of unknown function DN399_27800 PF00437 Type II/IV secretion system protein DN399_27820 PF04956 TrbC/VIRB2 family DN399_27830 PF12696 TraM recognition site of TraD and TraG DN399_27865 PF00877 NlpC/P60 family DN399_27875 PF17632 Family of unknown function (DUF5513) DN399_27895 PF01751 Toprim domain DN399_27895 PF01131 DNA topoisomerase DN399_27900 PF02517 CPBP intramembrane metalloprotease DN399_27905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN399_27905 PF00512 His Kinase A (phospho-acceptor) domain DN399_27905 PF00989 PAS fold DN399_27905 PF00672 HAMP domain DN399_27905 PF18698 Histidine kinase sensor domain DN399_27920 PF02384 N-6 DNA Methylase DN399_27935 PF13614 AAA domain DN399_27940 PF05732 Firmicute plasmid replication protein (RepL) DN399_27955 PF03432 Relaxase/Mobilisation nuclease domain